Seed Bank Viability in Disturbed Longleaf Pine Sites

Science.gov (United States)

Susan Cohen; Richard Braham; Felipe Sanchez

2004-01-01

Some of the most species-rich areas and highest concentrations of threatened and endangered species in the southeastern United States are found in wet savanna and flatwood longleaf pine (Pinus palustris Mill.) communities. Where intensive forestry practices have eliminated much of the natural understory of the longleaf ecosystem, the potential for...

Financial performance of loblolly and longleaf pine plantations

Science.gov (United States)

Steven D. Mills; Charles T. Stiff

2013-01-01

The financial performance of selected management regimes for loblolly (Pinus taeda L.) and longleaf pine (P. palustris Mill.) plantations were compared for four cases, each with low- and high-site productivity levels and each evaluated using 5 and 7 percent real discount rates. In all cases, longleaf pine was considered both with...

Effects of basal area on survival and growth of longleaf pine when practicing selection silviculture

International Nuclear Information System (INIS)

Kara, F.; Loewenstein, E.F.; Brockway, D.G.

2017-01-01

Aim of study: Uneven-aged (UEA) management systems can achieve multiple-use objectives, however, use of UEA techniques to manage longleaf pine (Pinus palustris Mill.) forests are still open to question, because of the species’ intolerance of competition. It was our aim to examine the influence of different levels (9.2, 13.8 and 18.4 m2 ha-1) of residual basal area (RBA) on longleaf pine seedling survival and growth following three growing seasons. Area of study: This study was conducted at the Escambia Experimental Forest, located on the Southern Coastal Plain of Alabama, in the southeastern United States. Material and Methods: Selection silviculture was implemented with the Proportional-Basal Area (Pro-B) method. Prescribed burning was conducted before seed dispersal and in the second year after germination. Photosynthetically active radiation (PAR) was measured under the canopy in the study plots. Survival and growth of longleaf pine seedlings were observed for three growing seasons. Main results: An inverse relationship was found between the number of germinants and RBA, but the mortality of germinants and planted seedlings was not affected by RBA. At age three, an inverse relationship was observed between root-collar diameter (RCD) growth of the germinants and RBA, but RCD growth of planted seedlings was not affected by RBA. Most of the study plots contained more than the projected number of seedlings needed to sustain the target diameter structure. Research highlights: Long-term continuous monitoring of seedling development and recruitment into canopy is required to determine the efficacy of UEA management. However, current data suggest that UEA methods may be a viable alternative to the use of even-aged (EA) methods in longleaf ecosystems.

Effects of basal area on survival and growth of longleaf pine when practicing selection silviculture

Energy Technology Data Exchange (ETDEWEB)

Kara, F.; Loewenstein, E.F.; Brockway, D.G.

2017-11-01

Aim of study: Uneven-aged (UEA) management systems can achieve multiple-use objectives, however, use of UEA techniques to manage longleaf pine (Pinus palustris Mill.) forests are still open to question, because of the species’ intolerance of competition. It was our aim to examine the influence of different levels (9.2, 13.8 and 18.4 m2 ha-1) of residual basal area (RBA) on longleaf pine seedling survival and growth following three growing seasons. Area of study: This study was conducted at the Escambia Experimental Forest, located on the Southern Coastal Plain of Alabama, in the southeastern United States. Material and Methods: Selection silviculture was implemented with the Proportional-Basal Area (Pro-B) method. Prescribed burning was conducted before seed dispersal and in the second year after germination. Photosynthetically active radiation (PAR) was measured under the canopy in the study plots. Survival and growth of longleaf pine seedlings were observed for three growing seasons. Main results: An inverse relationship was found between the number of germinants and RBA, but the mortality of germinants and planted seedlings was not affected by RBA. At age three, an inverse relationship was observed between root-collar diameter (RCD) growth of the germinants and RBA, but RCD growth of planted seedlings was not affected by RBA. Most of the study plots contained more than the projected number of seedlings needed to sustain the target diameter structure. Research highlights: Long-term continuous monitoring of seedling development and recruitment into canopy is required to determine the efficacy of UEA management. However, current data suggest that UEA methods may be a viable alternative to the use of even-aged (EA) methods in longleaf ecosystems.

Impact of fire in two old-growth montane longleaf pine stands

Science.gov (United States)

John S. Kush; John C. Gilbert; Crystal Lupo; Na Zhou; Becky Barlow

2013-01-01

The structure of longleaf pine (Pinus palustris Mill.) forests of the Southeastern United States Coastal Plains has been the focus of numerous studies. By comparison, the forests in the mountains of Alabama and Georgia are not well understood. Less than 1 percent of longleaf pine stands found in the montane portion of longleaf’s range are considered...

Overhead shading and growth of young longleaf pine

Science.gov (United States)

John C. Gilbert; John S. Kush; Ralph S. Meldahl; William D. Boyer; Dean H. Gjerstad

2014-01-01

A study to determine the effects of environmental conditions on the growth of longleaf pine (Pinus palustris Mill.) was initiated in 1969 on the Escambia Experimental Forest near Brewton, Alabama, USA. This study sample consisted of forty young naturally regenerated, even aged longleaf pine seedlings evenly divided between two soil types. At the beginning of the study...

Establishing Longleaf Pine Seedlings Under a Loblolly Pine Canopy (User’s Guide)

Science.gov (United States)

2017-02-01

longleaf pine forests (Figure 1) for the diverse values they provide. These forests afford abundant recreational opportunities like hiking , bird...combined herbicide-fertilizer treatments that might benefit planted longleaf pine seedlings after planting. In addition to measuring longleaf pine

A biologically-based individual tree model for managing the longleaf pine ecosystem

Science.gov (United States)

Rick Smith; Greg Somers

1998-01-01

Duration: 1995-present Objective: Develop a longleaf pine dynamics model and simulation system to define desirable ecosystem management practices in existing and future longleaf pine stands. Methods: Naturally-regenerated longleaf pine trees are being destructively sampled to measure their recent growth and dynamics. Soils and climate data will be combined with the...

Artificially regenerating longleaf pine on wet sites: preliminary analysis of effects of site preparation treatments on early survival and growth

Science.gov (United States)

Benjamin O. Knapp; G. Geoff Wang; Joan L. Walker

2010-01-01

Our study, conducted over two years on poorly drained, sandy sites in Onslow County, NC, compared the effects of eight common site preparation treatments on early survival and growth of planted longleaf pine seedlings. Through two growing seasons, we found survival to be similar across all treatments (p = 0.8806), but root collar diameter was greatest with combinations...

Longleaf pine forests and woodlands: old growth under fire!

Science.gov (United States)

Joan L. Walker

1999-01-01

The author discusses a once widespread forest type of the Southeast – longleaf pine dominated forests and woodlands. This system depends on fire – more or less frequent, and often of low intensity. Because human-mediated landscape fragmentation has drastically changed the behavior of fire on longleaf pine dominated landscapes, these forests and woodlands will never be...

Longleaf Pine Ecosystem Restoration on Small and Mid-Sized Tracts

Science.gov (United States)

Joan L. Walker

1999-01-01

Speaking of restoring the longleaf pine ecosystem, conservationists may present images of open stands I trees, prescribed burning, grassy ground layers, and of providing habitat for red-cockaded woodpeckers. Unfortunately, planting a longleaf pine forest, using fire, and recovering an endangered woodpecker all seem require lands larger than a backyard. To many,...

Impacts of logging and prescribed burning in longleaf pine forests managed under uneven-aged silviculture

Science.gov (United States)

Ferhat Kara; Edward Francis Loewenstein

2015-01-01

The longleaf pine (Pinus palustris Mill.) ecosystem has historically been very important in the southeastern United States due to its extensive area and high biodiversity. Successful regeneration of longleaf pine forests requires an adequate number of well distributed seedlings. Thus, mortality of longleaf pine seedlings during logging operations...

Longleaf pine ecosystem restoration: the role of the USDA Forest Service

Science.gov (United States)

Charles K. McMahon; D.J. Tomczak; R.M. Jeffers

1998-01-01

The greater longleaf pine ecosystem once occupied over 90 million acres from southeastern Virginia, south to central Florida, and west to eastern Texas. Today less than 3 million acres remain, with much of the remaining understory communities in an unhealthy state. A number of public and private conservation organizations are conducting collaborative longleaf pine...

Analyzing the complexity of cone production in longleaf pine by multiscale entropy

Science.gov (United States)

Xiongwen Chen; Qinfeng Guo; Dale G. Brockway

2016-01-01

The longleaf pine (Pinus palustris Mill.) forests are important ecosystems in the southeastern USA because of their ecological and economic value. Since European settlement, longleaf pine ecosystems have dramatically declined in extent, to the degree that they are now listed as endangered ecosystems. Its sporadic seed production, which...

Armillaria Root Disease

Science.gov (United States)

R.E. Williams; C.G. III Shaw; P.M. Wargo; W.H. Sites

1986-01-01

Armillaria root disease is found throughout temperate and tropical regions of the world. In the continental United States, the disease has been reported in nearly every State. Hosts include hundreds of species of trees, shrubs, vines, and forbs growing in forests, along roadsides, and in cultivated areas. The disease is caused by fungi, which live as parasites on...

Surfing the Koehler Curve: revisiting a method for the identification of longleaf pine stumps and logs

Science.gov (United States)

Thomas L. Eberhardt; Philip M. Sheridan; Karen G. Reed

2009-01-01

Measurements of pith and second growth ring diameters were used by Koehler in 1932 to separate longleaf pine (Pinus palustris Mill.) timbers from those of several southern pines (e.g., loblolly, shortleaf). In the current study, measurements were taken from plantation-grown longleaf, loblolly and shortleaf pine trees, as well as old growth longleaf pine, lightwood, and...

Above- and belowground competition from longleaf pine plantations limits performance of reintroduced herbaceous species.

Energy Technology Data Exchange (ETDEWEB)

T.B. Harrington; C.M. Dagley; M.B. Edwards.

2003-10-01

Although overstory trees limit the abundance and species richness of herbaceous vegetation in longleaf pine (Pinus palustris Mill.) plantations, the responsible mechanisms are poorly understood because of confounding among limiting factors. In fall 1998, research was initiated to determine the separate effects of above- and belowground competition and needlefall from overstory pines on understory plant performance. Three 13- to 15-yr-old plantations near Aiken, SC, were thinned to 0, 25, 50, or 100% of nonthinned basal area (19.5 m2 ha-1). Combinations of trenching (to eliminate root competition) and needlefall were applied to areas within each plot, and containerized seedlings of 14 perennial herbaceous species and longleaf pine were planted within each. Overstory crown closure ranged from 0 to 81%, and soil water and available nitrogen varied consistently with pine stocking, trenching, or their combination. Cover of planted species decreased an average of 16.5 and 14.1% as a result of above- and below-ground competition, respectively. Depending on species, needlefall effects were positive, negative, or negligible. Results indicate that understory restoration will be most successful when herbaceous species are established within canopy openings (0.1-0.2 ha) managed to minimize negative effects from above- and belowground competition and needlefall.

Ecological restoration of an old-growth longleaf pine stand utilizing prescribed fire

Science.gov (United States)

J. Morgan Varner; John S. Kush; Ralph S. Meldahl

2000-01-01

Ecological restoration using prescribed fire has been underway for 3 years in an uncut, old-growth longleaf pine (Pinus palustris) stand located in south Alabama. The longleaf pine ecosystem requires frequent (once every 1-10 years) surface fire to prevent succesion to later several stages. Before this study began, this stand had not burned in >...

Prescribed fire effects in a longleaf pine ecosystem--are winter fires working?

Science.gov (United States)

Rebecca J. Barlow; John S. Kush; John C. Gilbert; Sharon M. Hermann

2015-01-01

Longleaf pine (Pinus palustris Mill.) ecosystems once dominated 60 to 90 million acres and supported one of the most diverse floras in North America. It is well-known that longleaf pine ecosystems must burn frequently to maintain natural structure and function. This vegetation type ranks as one of the most fire-dependent in the country and must...

Silvicultural treatments for converting loblolly pine to longleaf pine dominance: Effects on planted longleaf pine seedlings

Science.gov (United States)

Huifeng Hu; G.Geoff Wang; Joan L. Walker; Benjamin O. Knapp

2012-01-01

A field study was installed to test silvicultural treatments for establishing longleaf pine (Pinus palustris Mill) in loblolly pine (P. taeda L.) stands. Harvesting was used to create seven canopy treatments, four with uniformly distributed canopies at different residual basal areas [Control (16.2 m2/ha),...

Longleaf Pine: An Updated Bibliography

Science.gov (United States)

John S. Kush; Ralph S. Meldahl; William D. Boyer; Charles K. McMahon

1996-01-01

The longleaf pine (Pinus palustris Mill.) forest figured prominently in the cultural and economic development of the South. What was once one of the most extensive forest ecosystems in North America has now become critically endangered (6). At the time of European settlement, this ecosystem dominated as much as 92 million acres throughout the...

Repeated fire effects on soil physical properties in two young longleaf pine stands on the west gulf coastal plain

Science.gov (United States)

Mary Anne Sword Sayer

2007-01-01

Repeated prescribed fire is a valuable tool for the management of longleaf and loblolly pine. When applied every two to ten years, for example, prescribed fire perpetuates existing longleaf pine ecosystems (Outcalt 1997). Furthermore, the acceptance of fire as a management tool, together with recent improvements in longleaf pine...

From loblolly to longleaf: fifth-year results of a longleaf pine restoration study at two ecologically distinct sites

Science.gov (United States)

Benjamin O. Knapp; G. Geoff Wang; Joan L. Walker; Huifeng Hu

2015-01-01

Historical land-use and management practices in the southeastern United States have resulted in the widespread conversion of many upland sites from dominance of longleaf pine (Pinus palustris Mill.) to loblolly pine (P. taeda L.) in the time following European settlement. Given the ecological, economic, and cultural...

Entropy dynamics in cone production of longleaf pine forests in the southeastern United States

Science.gov (United States)

Xiongwen Chen; Dale G. Brockway; Qinfeng Guo

2016-01-01

Sporadic temporal patterns of seed production are a challenge for the regeneration and restoration of longleaf pine, which is a keystone component of an endangered ecosystem in the southeastern United States. In this study, long-term data for longleaf pine cone production, collected at six sites across the southeastern region, was examined from the perspective of...

A whole stand growth and yield system for young longleaf pine plantations in Southwest Georgia

Science.gov (United States)

John R. Brooks; Steven B. Jack

2006-01-01

A whole stand growth and yield system for planted longleaf pine (Pinus palustris Mill.) was developed from permanent plot data collected annually over an 8 year period. The dataset consists of 12 intensively-managed longleaf pine plantations that are located in Lee, Worth, Mitchell, and Baker counties in southwest Georgia. Stand survival, dominant...

What 45 years of RLGS data has to say about longleaf pine mortality - not much

Science.gov (United States)

John S. Kush; John C. Gilbert; Rebecca J. Barlow

2015-01-01

The original longleaf pine (Pinus palustris Mill.) forest was self-perpetuating where seedlings always had to be present. It reproduced itself in openings in the overstory where dense young stands developed. These openings would range from a few tenths of an acre to large openings of several thousand acres. Regardless of the event size, longleaf...

Early growth of planted longleaf pine seedlings in relation to light, soil moisture, and soil temperature

Science.gov (United States)

Benjamin O. Knapp; G. Geoff Wang; Joan L. Walker

2006-01-01

Drastic reductions in longleaf pine (Pinus palustris Mill.) acreage have led to an increased focus on regeneration of the longleaf pine ecosystem. Many areas require artificial regeneration for establishment, and site preparation techniques may be implemented to increase regeneration success. The objectives of this study were to determine differences...

Spatial patterns of longleaf pine (Pinus palustris) seedling eastablishment on the croatan national forest, North Carolina

Science.gov (United States)

Chadwick R. Avery; Susan Cohen; Kathleen C. Parker; John S. Kush

2004-01-01

Ecological research aimed at determining optimal conditions for longleaf pine regeneration has become increasingly important in efforts @ restore the longleaf pine ecosystem. Numerous authors have concluded that a negative relationship exists between the occurrence of seedlings and the occurrence of mature trees; however, observed field conditions in several North...

Common Plants of Longleaf Pine-Bluestem Range

Science.gov (United States)

Harold E. Grelen; Vinson L. Duvall

1966-01-01

This publication describes many grasses, grasslike plants, forbs, and shrubs that inhabit longleaf pine-bluestem range. The species vary widely in importance; most produce forage palatable to cattle, some are noxious weeds, and others are valuable indicators of trends in range condition. All are abundant enough on certain sites, however, to require identification for...

Assessing longleaf pine (Pinus palustris) restoration after southern pine beetle kill using a compact experimental design

Science.gov (United States)

J.-P. Berrill; C.M. Dagley

2010-01-01

A compact experimental design and analysis is presented of longleaf pine (Pinus palustris) survival and growth in a restoration project in the Piedmont region of Georgia, USA. Longleaf pine seedlings were planted after salvage logging and broadcast burning in areas of catastrophic southern pine beetle (Dendroctonus frontalis) attacks on even-aged mixed pine-hardwood...

Carbon sequestration and natural longleaf pine ecosystem

Science.gov (United States)

Ram Thapa; Dean Gjerstad; John Kush; Bruce Zutter

2010-01-01

The Southeastern United States was once dominated by a longleaf pine ecosystem which ranged from Virginia to Texas and covered approximately 22 to 36 million ha. The unique fire tolerant species provided the necessary habitat for numerous plant and animal species. Different seasons of prescribed fire have various results on the ecosystem and the carbon which is stored...

Effects of Precommercial Thinning and Midstory Control on Avian and Small Mammal Communities during Longleaf Pine Savanna Restoration.

Energy Technology Data Exchange (ETDEWEB)

Lane, Vanessa R [Abraham Baldwin Agricultural College; Kilgo, John C [USDA Forest Service, Southern Research Station

2015-01-01

Abstract - Restoring longleaf pine (Pinus palustris Mill.) savanna is a goal of many southern land managers, and longleaf plantations may provide a mechanism for savanna restoration. However, the effects of silvicultural treatments used in the management of longleaf pine plantations on wildlife communities are relatively unknown. Beginning in 1994, we examined effects of longleaf pine restoration with plantation silviculture on avian and small mammal communities using four treatments in four 8- to 11- year-old plantations within the Savannah River Site in South Carolina. Treatments included prescribed burning every 3 to 5 years, plus: (1) no additional treatment (burn-only control); (2) precommercial thinning; (3) non-pine woody control with herbicides; and (4) combined thinning and woody control. We surveyed birds (1996-2003) using 50-m point counts and small mammals with removal trapping. Thinning and woody control alone had short-lived effects on avian communities, and the combination treatment increased avian parameters over the burn-only control in all years. Small mammal abundance showed similar trends as avian abundance for all three treatments when compared with the burn-only control, but only for 2 years post-treatment. Both avian and small mammal communities were temporarily enhanced by controlling woody vegetation with chemicals in addition to prescribed fire and thinning. Therefore, precommercial thinning in longleaf plantations, particularly when combined with woody control and prescribed fire, may benefit early-successional avian and small mammal communities by developing stand conditions more typical of natural longleaf stands maintained by periodic fire.

Fertilizer responses of longleaf pine trees within a loblolly pine plantation: separating direct effects from competition effects

Science.gov (United States)

Peter H Anderson; Kurt H. Johnsen

2009-01-01

Evidence is mixed on how well longleaf pine (Pinus palustris Mill.) responds to increased soil nitrogen via fertilization. We examined growth and physiological responses of volunteer longleaf pine trees within an intensive loblolly pine (Pinus taeda L.) fertilization experiment. Fertilizer was applied annually following thinning at age 8 years (late 1992) at rates...

Port-Orford-Cedar Root Disease

Science.gov (United States)

Lewis F. Roth; Robert D. Jr. Harvey; John T. Kliejunas

1987-01-01

The most serious disease of Port-Orford-cedar (Chamaecyparis lawsoniana (A. Murr.) Parl.) is a root disease caused by the fungus Phytophthora lateralis. Nursery stock, ornamentals, and timber trees are subject to attack. Other species of Chamaecyparis are less susceptible than Port-Orford-cedar, and trees of other genera are not affected.

Root diseases, climate change and biomass productivity

International Nuclear Information System (INIS)

Warren, G.R.; Cruickshank, M.

2004-01-01

Tree growth and yield in eastern boreal spruce fir forests are both greatly affected by root and butt rots. These pests are also prevalent in western coniferous species and boreal-sub-boreal forests. Infections are difficult to detect, but reduced growth, tree mortality, wind throw and scaled butt cull contribute to considerable forest gaps. Harvesting and stand tending practices in second growth stands are creating conditions for increased incidence. Tree stress is one of the major factors affecting the spread of root disease. It is expected that climate change will create abnormal stress conditions that will further compound the incidence of root disease. A comparison was made between natural and managed stands, including harvesting and stand practices such as commercial thinning. Studies of Douglas-fir forests in British Columbia were presented, with results indicating that managed forests contain one third to one half less carbon biomass than unmanaged forests. It was concluded that root diseases must be recognized and taken into account in order to refine and improve biomass estimates, prevent overestimation of wood supply models and avoid potential wood fibre losses. 40 refs., 2 figs.

Silvicultural treatments for converting loblolly pine to longleaf pine dominance: Effects on resource availability and their relationships with planted longleaf pine seedlings

Science.gov (United States)

Huifeng Hu; G.Geoff Wang; Joan L. Walker; Benjamin O. Knapp

2012-01-01

Throughout the southeastern United States, land managers are currently interested in converting loblolly pine (Pinus taeda L.) plantations to species rich longleaf pine (Pinus palustris Mill.) ecosystems. In a 3-year study on moderately well- to well-drained soils of the Lower Coastal Plain in North Carolina, we examined the...

Nutrition challenges of longleaf pine in the southeast

Science.gov (United States)

M.A. Sword Sayer; L.G. Eckhardt; E.A. Carter

2009-01-01

Low vigor of longleaf pine has been reported at Fort Benning in Georgia, and Eglin Air Force Base in Florida. In an effort to determine the cause of this problem, foliar nutrition was assessed. Results indicated that macro- and micronutrients were generally sufficient regardless of vigor status. Foliar Mn, however, was elevated at both locations. Excess Mn has the...

Fire in longleaf pine stand management: an economic analysis

Science.gov (United States)

Rodney L. Busby; Donald G. Hodges

1999-01-01

A simulation analysis of the economics of using prescribed fire as a forest management tool in the management of longleaf pine (Pinus palustris Mill.) plantations was conducted. A management regime using frequent prescribed fire was compared to management regimes involving fertilization and chemical release, chemical control, and mechanical control. Determining the...

Longleaf Pine Ground-Layer Vegetation in Francis Marion National Forest: Reintroduction, Restoration, and Vegetation Assembly

Energy Technology Data Exchange (ETDEWEB)

Glitzenstein, J.; Streng, D.; Wade, D.

2001-01-01

Study represents significant progress in understanding of compositional gradients in longleaf pine plant communities of Central South Carolina. Study shows the importance of water table depths as a controlling variable with vegetation patterns in the field and similar effects in a garden experiment. Grass planting study suggests that observed field distributions of dormant pine savannah grasses derive from complex interactive effects of fire history, hydrology and light environments. Use of regional longleaf data set to identify candidate species for introduction also appears to be a pioneering effort.

Longleaf Pine Ground-Layer Vegetation in Francis Marion National Forest: Reintroduction, Restoration, and Vegetation Assembly

International Nuclear Information System (INIS)

Glitzenstein, J.; Streng, D.; Wade, D.

2001-01-01

Study represents significant progress in understanding of compositional gradients in longleaf pine plant communities of Central South Carolina. Study shows the importance of water table depths as a controlling variable with vegetation patterns in the field and similar effects in a garden experiment. Grass planting study suggests that observed field distributions of dormant pine savannah grasses derive from complex interactive effects of fire history, hydrology and light environments. Use of regional longleaf data set to identify candidate species for introduction also appears to be a pioneering effort

Destroyed virgin longleaf pine stand lives-on digitally

Science.gov (United States)

John C. Gilbert; S. Kush; Rebecca J. Barlow

2015-01-01

The Flomaton Natural Area (FNA) once stood as one of the few remnant fragments of virgin, old-growth longleaf pine stands (Pinus palustris Mill.) in the Southeast. This 80-acre stand contained trees over 200 years old. A restoration effort began in 1994 to remove off-site trees and to reintroduce fire to the site after over 40 years of fire suppression. A geographic...

Revivification of a method for identifying longleaf pine timber and its application to southern pine relicts in southeastern Virginia

Science.gov (United States)

Thomas L. Eberhardt; Philip M. Sheridan; Arvind A.R. Bhuta

2011-01-01

Abstract: Longleaf pine (Pinus palustris Mill.) cannot be distinguished from the other southern pines based on wood anatomy alone. A method that involves measuring pith and second annual ring diameters, reported by Arthur Koehler in 1932 (The Southern Lumberman, 145: 36–37), was revisited as an option for identifying longleaf pine timbers and stumps. Cross-section...

Influence of herbicides and felling, fertilization, and prescribed fire on longleaf pine establishment and growth through six growing seasons

Science.gov (United States)

James D. Haywood

2006-01-01

Recovery of longleaf pine (Pinus palutris. Mill.) is necessary to arrest the decline of many associated plants and animals, and the establishment of longleaf pine on much of its original range requires artificial regeneration and diligence. In central Louisiana, USA, two fertilization levels (No [NF] or Yes [F-36 kg/ha N and 40 kg/ha PI) in...

Hurricane Katrina winds damaged longleaf pine less than loblolly pine

Science.gov (United States)

Kurt H. Johnsen; John R. Butnor; John S. Kush; Ronald C. Schmidtling; C. Dana. Nelson

2009-01-01

Some evidence suggests that longleaf pine might be more tolerant of high winds than either slash pine (Pinus elliotii Englem.) or loblolly pine (Pinus taeda L.). We studied wind damage to these three pine species in a common garden experiment in southeast Mississippi following Hurricane Katrina,...

Comparison of red-cockaded woodpecker (Picoides borealis) nestling diet in old-growth and old-field longleaf pine (Pinus palustris) habitats

Science.gov (United States)

James L. Hanula; R. Todd Engstrom

2000-01-01

Automatic cameras were used to record adult red-cockaded woodpecker (Picoides borealis) nest visits with food for nestlings. Diet of nestlings on or near an old-growth longleaf pine (Pinus palustris) remnant in southern Georgia was compared to that in longleaf pine stands established on old farm fields in western South Carolina....

Individual tree diameter, height, and volume functions for longleaf pine

Science.gov (United States)

Carlos A. Gonzalez-Benecke; Salvador A. Gezan; Timothy A. Martin; Wendell P. Cropper; Lisa J. Samuelson; Daniel J. Leduc

2014-01-01

Currently, little information is available to estimate individual tree attributes for longleaf pine (Pinus palustris Mill.), an important tree species of the southeastern United States. The majority of available models are local, relying on stem diameter outside bark at breast height (dbh, cm) and not including stand-level parameters. We developed...

Leaf Physiological and Morphological Responses to Shade in Grass-Stage Seedlings and Young Trees of Longleaf Pine

Directory of Open Access Journals (Sweden)

Lisa J. Samuelson

2012-08-01

Full Text Available Longleaf pine has been classified as very shade intolerant but leaf physiological plasticity to light is not well understood, especially given longleaf pine’s persistent seedling grass stage. We examined leaf morphological and physiological responses to light in one-year-old grass-stage seedlings and young trees ranging in height from 4.6 m to 6.3 m to test the hypothesis that young longleaf pine would demonstrate leaf phenotypic plasticity to light environment. Seedlings were grown in a greenhouse under ambient levels of photosynthetically active radiation (PAR or a 50% reduction in ambient PAR and whole branches of trees were shaded to provide a 50% reduction in ambient PAR. In seedlings, shading reduced leaf mass per unit area (LMA, the light compensation point, and leaf dark respiration (R_D, and increased the ratio of light-saturated photosynthesis to R_D and chlorophyll b and total chlorophyll expressed per unit leaf dry weight. In trees, shading reduced LMA, increased chlorophyll a, chlorophyll b and total chlorophyll on a leaf dry weight basis, and increased allocation of total foliar nitrogen to chlorophyll nitrogen. Changes in leaf morphological and physiological traits indicate a degree of shade tolerance that may have implications for even and uneven-aged management of longleaf pine.

Restoring a disappearing ecosystem: the Longleaf Pine Savanna.

Energy Technology Data Exchange (ETDEWEB)

Harrington, Timothy B. [USFS; Miller, Karl V. [University of Georgia; Park, Noreen

2013-05-01

Longleaf pine (Pinus palustris) savannas of the southeastern United States contain some of the worlds most diverse plant communities, along with a unique complement of wildlife. Their traditionally open canopy structure and rich understory of grasses and herbs were critical to their vigor. However, a long history of land-use practices such as logging, farming, and fire exclusion have reduced this once-widespread ecosystem to only 3 percent of its original range. At six longleaf pine plantations in South Carolina, Tim Harrington with the Pacific Northwest Research Station and collaborators with the Southern Research Station used various treatments (including prescribed burns, tree thinning, and herbicide applications) to alter the forest structure and tracked how successful each one was in advancing savanna restoration over a 14-year period. They found that typical planting densities for wood production in plantations create dense understory shade that excludes many native herbaceous species important to savannas and associated wildlife. The scientists found that although tree thinning alone did not result in sustained gains, a combination of controlled burning, thinning, and herbicide treatments to reduce woody plants was an effective strategy for recovering the savanna ecosystem. The scientists also found that these efforts must be repeated periodically for enduring benefits.

Ecosystem carbon density and allocation across a chronosequence of longleaf pine forests

Science.gov (United States)

Lisa J. Samuelson; Thomas A. Stokes; John R. Butnor; Kurt H. Johnsen; Carlos A. Gonzalez-Benecke; Timothy A. Martin; Wendell P. Cropper; Pete H. Anderson; Michael R. Ramirez; John C. Lewis

2017-01-01

Forests can partially offset greenhouse gas emissions and contribute to climate change mitigation, mainly through increases in live biomass. We quantified carbon (C) density in 20 managed longleaf pine (Pinus palustris Mill.) forests ranging in age from 5...

Thickness and roughness measurements for air-dried longleaf pine bark

Science.gov (United States)

Thomas L. Eberhardt

2015-01-01

Bark thicknesses for longleaf pine (Pinus palustris Mill.) were investigated using disks collected from trees harvested on a 70-year-old plantation. Maximum inner bark thickness was relatively constant along the tree bole whereas maximum outer bark thickness showed a definite decrease from the base of the tree to the top. The minimum whole bark thickness followed the...

Genetic fingerprinting of longleaf pine seed orchard clones following Hurricane Hugo

Science.gov (United States)

K. D. Jermstad; P.A. Guge; E.R. Carroll; S.T. Friedman; D.B. Neale

1993-01-01

Isozyme and restriction fragment length polymorphism (RFLP) markers were used to determine the genetic identities of 12 longleaf pine (Pinus palustrus Mill.) ramets whose identities came into question after Hurricane Hugo. Isozyme assays were performed for 12 enzyme systems representing 15 loci. Variation at 6 loci revealed unique identities for 6...

Symptoms and Diagnosis of Annosus Root Disease in the Intermountain Western United States

Science.gov (United States)

James W. Byler

1989-01-01

Stand patterns of annosus root disease include various degrees and patterns of tree mortality; tree crown, root collar, and root symptoms; and the condition and location of stumps. In the Intermountain states of Montana, Idaho, and Utah, annosus root disease is found in the ponderosa pine, mixed conifer and high-elevation fir forests. Stand patterns are of value in...

Long-Term Effects of Season of Prescribed Burn on the Fine-Root Growth, Root Carbohydrates, and Foliar Dynamics of Mature Longleaf Pine

Science.gov (United States)

Eric A. Kuehler; Mary Anne Sword Sayer; James D. Haywood; C. Dan Andries

2004-01-01

Depending on the season and intensity of fire, as well as the phenology of foliage and new root growth, fire may damage foliage, and subsequently decrease whole-crown carbon fixation and allocation to the root system. In central Louisiana the authors investigated how season of prescribed burning affects fine-root dynamics, root carbohydrate relations, and leaf area...

Weather effects on the success of longleaf pine cone crops

Science.gov (United States)

Daniel J. Leduc; Shi-Jean Susana Sung; Dale G. Brockway; Mary Anne Sword Sayer

2016-01-01

We used National Oceanic and Atmospheric Administration weather data and historical records of cone crops from across the South to relate weather conditions to the yield of cones in 10 longleaf pine (Pinus palustris Mill.) stands. Seed development in this species occurs over a three-year time period and weather conditions during any part of this...

Structure and composition of historical longleaf pine ccosystems in Mississippi, USA

Science.gov (United States)

Brice B. Hanberry; Keith Coursey; John S. Kush

2018-01-01

Longleaf pine (Pinus palustris) historically was a widespread ecosystem composed of a simple tree canopy and grasslands ground layer. After widespread loss of this ecosystem due to logging and fire exclusion, little quantitative information exists about historical structure for restoration goals. We identified composition in De Soto National Forest and Pearl River...

Root cause of waterborne diseases in Pakistan

International Nuclear Information System (INIS)

Hashml, H.N.; Ghumman, A.R.; Malik, N.E.

2005-01-01

The waterborne diseases are increasing rapidly at an alarming rate in Pakistan due to poor sanitation and unsafe drinking water supplies. This study shows that about 25 percent of all the illnesses in Lahore are due to severe cases of waterborne diseases. Unhygienic sanitation system is the root cause for this scenario. Drinking water, samples were collected from different zones of the city to find out the root cause of waterborne diseases. The samples from the distribution system serving 'Kachi Abbadies' (Underdeveloped areas) were much more contaminated, may be due to non-chlorination as compared to the water which is regularly chlorinated in posh areas of the city. Contribution of soakage pits in groundwater contamination is more significant at shallow depths. From the laboratory results it is clear that water distribution in underdeveloped areas of the city is highly contaminated and ground water available at shallow depth is also infected by microbial activities. Data collected from the different hospitals to investigate the problem shows that waterborne diseases vary their trend seasonally. Here in Pakistan, rainy season (July-August) reveals maximum number of cases of waterborne diseases. Proper sanitation and water supply systems are more essential to control the influence of waterborne diseases within the country. It is strongly recommended that reputable ways of communications are urgently required to highlight the diseases related to unsafe drinking water. (author)

Frequent Prescribed Burning as a Long-term Practice in Longleaf Pine Forests Does Not Affect Detrital Chemical Composition.

Science.gov (United States)

Coates, T Adam; Chow, Alex T; Hagan, Donald L; Wang, G Geoff; Bridges, William C; Dozier, James H

2017-09-01

The O horizon, or detrital layer, of forest soils is linked to long-term forest productivity and health. Fuel reduction techniques, such as prescribed fire, can alter the thickness and composition of this essential ecosystem component. Developing an understanding of the changes in the chemical composition of forest detritus due to prescribed fire is essential for forest managers and stakeholders seeking sustainable, resilient, and productive ecosystems. In this study, we evaluated fuel quantity, fuel structure, and detrital chemical composition in longleaf pine ( Miller) forests that have been frequently burned for the last 40 yr at the Tom Yawkey Wildlife Center in Georgetown, SC. Our results suggest that frequent prescribed fire reduces forest fuel quantity ( burned detritus. Our burning activities varied in the short term, consisting of annual dormant, annual growing, and biennial dormant season burns. Seasonal distinctions were present for fuel quantity and vertical fuel structure, but these differences were not noted for the benzene/phenol ratio. These results are significant as more managers consider burning existing longleaf stands while determining effective management practices for longleaf stands yet to be established. Managers of such stands can be confident that frequent, low-intensity, low-severity prescribed burns in longleaf pine forests do little to affect the long-term chemical composition of forest detritus. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Longleaf pine regeneration following Hurricane Ivan utilizing the RLGS plots

Science.gov (United States)

John C. Gilbert; John S. Kush

2013-01-01

On September 16, 2004, Hurricane Ivan hit the Alabama coast and severely impacted numerous plots in the U.S. Forest Service’s Regional Longleaf Growth Study (RLGS). The Escambia Experimental Forest (EEF) has 201 of the 325 RLGS plots. Nearly one-third of the EEF was impacted. Nine plots with pole-sized trees were entirely lost. Another 54 plots had some type of damage...

Structure and Composition of Vegetation of Longleaf Pine Plantations Compared to Natural Stands Occurring Along an Environmental Gradient at the Savannah River Site

Science.gov (United States)

Gregory P. Smith; Victor B. Shelburne; Joan L. Walker

2002-01-01

Fifty-four plots in 33-43 year old longleaf pine plantations were compared to 30 remnant plots in longleaf stands on the Savannah River Site in South Carolina. Within these stands, the structure and composition of primarily the herb layer relative to a presumed soil moisture or soil texture gradient was studied using the North Carolina Vegetation Survey methodology....

Survey of root rot diseases of sugar bett in Central Greece

Directory of Open Access Journals (Sweden)

Karadimos Dimitros A.

2006-01-01

Full Text Available An extensive survey was conducted during the summer and autumn of 2004 in sugar beet fields in the area of Larissa, Thessaly region, with plants showing symptoms of root rot diseases. The aim of the monitoring was to identify the causal agents of root rot diseases. In total, 76 sugar beet fields were surveyed and 5-10 diseased roots were examined from each field. Isolations, carried out on PDA, showed that two main fungal pathogens causing root rot were Rhizoctonia solani and Phytophthora cryptogea. The former was isolated in 46% of the fields and the latter in 38% of the fields. In addition, Rhizopus stolonifer, Fusarium spp., Scerotium rolfsii and Rhizoctonia violacea were isolated in 14%, 7%, 4% and 1% of the fields respectively. In most of the surveyed fields only one pathogen species was isolated and only in a few of them more than one fungal species was identified.

Mechanical Properties of Longleaf Pine Treated with Waterborne Salt Preservatives.

Science.gov (United States)

1983-08-01

were measured on small clear bending specimens of longleaf pine sapwood treated with three wateroorne salt preservative systems. Preservative...wood, but the results of past research in this area (appendix I: Literature) are inconsistent and inconclusive, particularly at high loadings of...pine sapwood either air or kiln dried after treatment to retentions from 0.25 to 2.5 lb/ft3. ACA has no effect on MOR. but CCA-type preservatives

Effects of overstory retention, herbicides, and fertilization on sub-canopy vegetation structure and functional group composition in loblolly pine forests restored to longleaf pine

Science.gov (United States)

Benjamin O. Knapp; Joan L. Walker; G. Geoff Wang; Huifeng Hu; Robert N.  Addington

2014-01-01

The desirable structure of longleaf pine forests, which generally includes a relatively open canopy of pines, very few woody stems in the mid-story, and a well-developed, herbaceous ground layer, provides critical habitat for flora and fauna and contributes to ecosystem function. Current efforts to restore longleaf pine to upland sites dominated by second-growth...

Root rot diseases of sugar beet

Directory of Open Access Journals (Sweden)

Jacobsen Barry J.

2006-01-01

Full Text Available Root rot diseases of sugar beet caused by Rhizoctonia solani (AG 2-2 IIIB and AG 2-2 IV, R. crocorum, Aphanomyces cochlioides, Phoma betae, Macrophomina phaeseolina, Fusarium oxysporum f.sp. radicis-betae, Pythium aphanidermatum Phytophthora drechsleri, Rhizopus stolonifer, R. arrhizus and Sclerotium rolfsii cause significant losses wherever sugar beets are grown. However, not all these soil-borne pathogens have been reported in all sugar beet production areas. Losses include reduced harvestable tonnage and reduced white sugar recovery. Many of these pathogens also cause post harvest losses in storage piles. Control for diseases caused by these pathogens include disease resistant cultivars, avoidance of stresses, cultural practices such as water management and the use of fungicides.

On the number of genes controlling the grass stage in longleaf pine

Science.gov (United States)

C. Dana Nelson; C. Weng; Thomas L. Kubisiak; M. Stine; C.L. Brown

2003-01-01

The grass stage is an inherent and distinctive developmental trait of longleaf pine (Pinus palustris), in which height growth in the first few years after germination is suppressed. In operational forestry practice the grass stage extends for nvo to several years and often plays a role in planting failures and decisions to plant alternative species....

Insect Pollinators of Three Rare Plants in a Florida Longleaf Pine Forest

Science.gov (United States)

Theresa Pitts-Singer; James L. Hanula; Joan L. Walker

2002-01-01

As a result of human activity, longleaf pine (Pinus palustris Miller) forests in the southern United States have been lost or drastically altered. Many of the plant species that historically occupied those forests now persist only as remnants and are classified as threatened or endangered. In order to safeguard such species, a better understanding of...

Reptile assemblage response to restoration of fire-suppressed longleaf pine sandhills.

Science.gov (United States)

Steen, David A; Smith, Lora L; Conner, L M; Litt, Andrea R; Provencher, Louis; Hiers, J Kevin; Pokswinski, Scott; Guyer, Craig

2013-01-01

Measuring the effects of ecological restoration on wildlife assemblages requires study on broad temporal and spatial scales. Longleaf pine (Pinus palustris) forests are imperiled due to fire suppression and subsequent invasion by hardwood trees. We employed a landscape-scale, randomized-block design to identify how reptile assemblages initially responded to restoration treatments including removal of hardwood trees via mechanical methods (felling and girdling), application of herbicides, or prescribed burning alone. Then, we examined reptile assemblages after all sites experienced more than a decade of prescribed burning at two- to thee-year return intervals. Data were collected concurrently at reference sites chosen to represent target conditions for restoration. Reptile assemblages changed most rapidly in response to prescribed burning, but reptile assemblages at all sites, including reference sites, were generally indistinguishable by the end of the study. Thus, we suggest that prescribed burning in longleaf pine forests over long time periods is an effective strategy for restoring reptile assemblages to the reference condition. Application of herbicides or mechanical removal of hardwood trees provided no apparent benefit to reptiles beyond what was achieved by prescribed fire alone.

Analysis of seasonal, diurnal, and noctural growth patterns of young longleaf pine

Science.gov (United States)

John C. Gilbert; Ralph S. Meldahl; John S. Kush; William D. Boyer

2006-01-01

Forty longleaf pine (Pinus palustris Mill.) trees initially ranging from 1 to 1.5 m in height were measured on the Escambia Experimental Forest from 1969 through 1980. The trees were evenly divided between two soil types. From 1969 through 1970, height and diameter measurements were recorded one to four times weekly during the growing seasons and...

Spatial analysis of longleaf pine stand dynamics after 60 years of management

Science.gov (United States)

John C. Gilbert; John S. Kush; Rebecca J. Barlow

2012-01-01

There are still many questions and misconceptions about the stand dynamics of naturally-regenerated longleaf pine (Pinus palustris Mill.). Since 1948, the “Farm Forty,” a forty-acre tract located on the USDA Forest Service Escambia Experimental Forest near Brewton, Alabama, has been managed to create high quality wood products, to successfully...

Site Index Curves for Direct-Seeded Loblolly and Longleaf Pines in Louisiana

Science.gov (United States)

Quang V. Cao; V. Clark Baldwin; Richard E. Lohrey

1995-01-01

Site index equations were developed for direct-seeded loblollypine (Pinus taeda L.) and longleaf pine (Pinus palustris Mill.) based on data from 148 and 75 permanent plots, respectively. These plots varied from 0.053 to 0.119 ac in size, and were established in broadcast, row, and spot seeded stands throughout Louisiana. The Bailey and Clutter (1974) model was...

Early density management of longleaf pine reduces susceptibility to ice storm damage

Science.gov (United States)

Timothy B. Harrington; Thaddeus A. Harrington

2016-01-01

The Pax winter storm of February 2014 caused widespread damage to forest stands throughout the southeastern U.S. In a long-term study of savanna plant community restoration at the Savannah River Site, Aiken, SC, precommercial thinning (PCT) of 8- to 11-year-old plantations of longleaf pine (Pinus palustris) in 1994 reduced...

The initial phase of a Longleaf Pine-Wiregrass Savanna restoration: species establishment and community responses.

Energy Technology Data Exchange (ETDEWEB)

Aschenbach, Todd, A; Foster, Bryan, L.; Imm, Donald, W.

2010-09-01

AbstractAbstract The significant loss of the longleaf pine-wiregrass ecosystem in the southeastern United States has serious implications for biodiversity and ecosystem functioning. In response to this loss, we have initiated a long-term and landscape-scale restoration experiment at the 80,125 ha (310 mi2) Department of Energy Savannah River Site (SRS) located near Aiken, South Carolina. Aristida beyrichiana (wiregrass), an important and dominant grass (i.e., a “matrix” species) of the longleaf pine savanna understory, and 31 other herbaceous “non-matrix” species were planted at six locations throughout SRS in 2002 and 2003. Of the 36,056 transplanted seedlings, 75% were still alive in June 2004, while mean 1–2 year survival across all planted species was 48%. Lespedeza hirta (hairy lespedeza) exhibited the greatest overall survival per 3 ×3 m cell at 95%, whereas Schizachyrium spp. (little bluestem) exhibited the greatest mean cover among individual species at 5.9%. Wiregrass survival and cover were significantly reduced when planted with non-matrix species. Aggregate cover of all planted species in restored cells averaged 25.9% in 2006. High rates of survival and growth of the planted species resulted in greater species richness (SR), diversity, and vegetative cover in restored cells. Results suggest that the loss of the longleaf pine-wiregrass ecosystem may be ameliorated through restoration efforts and illustrate the positive impact of restoration plantings on biodiversity and vegetative cover.

The Effect of Restoration Treatments on the Spatial Variability of Soil Processes under Longleaf Pine Trees

Directory of Open Access Journals (Sweden)

John K. Hiers

2012-08-01

Full Text Available The objectives of this study were to (1 characterize tree-based spatial patterning of soil properties and understory vegetation in frequently burned (“reference state” and fire-suppressed longleaf pine forests; and (2 determine how restoration treatments affected patterning. To attain these objectives, we used an experimental manipulation of management types implemented 15 years ago in Florida. We randomly located six mature longleaf pine trees in one reference and four restoration treatments (i.e., burn, control, herbicide, and mechanical, for a total of 36 trees. In addition to the original treatments and as part of a monitoring program, all plots were subjected to several prescribed fires during these 15 years. Under each tree, we sampled mineral soil and understory vegetation at 1 m, 2 m, 3 m and 4 m (vegetation only away from the tree. At these sites, soil carbon and nitrogen were higher near the trunk while graminoids, forbs and saw palmetto covers showed an opposite trend. Our results confirmed that longleaf pine trees affect the spatial patterning of soil and understory vegetation, and this patterning was mostly limited to the restoration sites. We suggest frequent burning as a probable cause for a lack of spatial structure in the “reference state”. We attribute the presence of spatial patterning in the restoration sites to accumulation of organic materials near the base of mature trees.

The quest for methods to identify longleaf pine stump relicts in Southeastern Virginia

Science.gov (United States)

Thomas L. Eberhardt; Philip M. Sheridan; Chi-Leung So; Arvind A.R. Bhuta; Karen G. Reed

2015-01-01

The discovery of lightwood and turpentine stumps in southeastern Virginia raised questions about the true historical range for longleaf pine (Pinus palustris Mill.). Several investigative studies were therefore carried out to develop a method to determine the taxa of these relicts. Chemical approaches included the use of near infrared (NIR) spectroscopy coupled with...

Protecting and restoring longleaf pine forests on the Kisatchie National Forest in Louisiana

Science.gov (United States)

James D. Haywood; Michael Elliot-Smith; Finis Harris; Alton Martin

2000-01-01

Longleaf pine (Pinus palustris Mill.) forests once constituted a major ecosystem in the Southern United States stretching from southeastern Virginia south to central Florida and west into East Texas. These forests covered a wide range of site conditions, from wet pine flatwoods to dry mountain slopes. Intensive exploitation reduced the extent of old-...

Root rots

Science.gov (United States)

Kathryn Robbins; Philip M. Wargo

1989-01-01

Root rots of central hardwoods are diseases caused by fungi that infect and decay woody roots and sometimes also invade the butt portion of the tree. By killing and decaying roots, root rotting fungi reduce growth, decrease tree vigor, and cause windthrow and death. The most common root diseases of central hardwoods are Armillaria root rot, lnonotus root rot, and...

Differential Response of Floating and Submerged Leaves of Longleaf Pondweed to Silver Ions

Directory of Open Access Journals (Sweden)

Nisha Shabnam

2017-06-01

Full Text Available In this study, we have investigated variations in the potential of floating and submerged leaves of longleaf pondweed (Potamogeton nodosus to withstand silver ion (Ag+-toxicity. Both floating and submerged leaves changed clear colorless AgNO3 solutions to colloidal brown in the presence of light. Transmission electron microscopy revealed the presence of distinct crystalline Ag-nanoparticles (Ag-NPs in these brown solutions. Powder X-ray diffraction pattern showed that Ag-NPs were composed of Ag0 and Ag2O. Photosystem (PS II efficiency of leaves declined upon exposure to Ag+ with a significantly higher decline in the submerged leaves than in the floating leaves. Similarly, Ag+ treatment caused a significant reduction in the carboxylase activity of the ribulose bisphosphate carboxylase/oxygenase in leaves. The reduction in this carboxylase activity was significantly higher in the submerged than in the floating leaves. Ag+ treatment also resulted in a significant decline in the levels of non-enzymatic and enzymatic antioxidants; the decline was significantly lower in the floating than in submerged leaves. X-ray photoelectron spectroscopy revealed the presence of Ag2O in these leaves. Inductively coupled plasma mass spectrometry analysis revealed a three-fold higher Ag content in the submerged than in floating leaves. Our study demonstrates that floating leaves of longleaf pondweed have a superior potential to counter Ag+-toxicity compared with submerged leaves, which could be due to superior potential of floating leaves to reduce Ag+ to less/non-toxic Ag0/Ag2O-nanoparticles/nanocomplexes. We suggest that modulating the genotype of longleaf pondweed to bear higher proportion of floating leaves would help in cleaning fresh water bodies contaminated with ionic forms of heavy metals.

Armillaria root disease in the western USA

Science.gov (United States)

John Hanna; Sara Ashiglar; Anna Case; Mary Lou Fairweather; Chris Hoffman; Mee-Sook Kim; Helen Maffei; Robert Mathiasen; Geral McDonald; Erik Nelson; Amy Ross-Davis; John Shaw; Ned Klopfenstein

2012-01-01

Armillaria species display diverse ecological behaviors from beneficial saprobe to virulent pathogen. Armillaria solidipes, a causal agent of Armillaria root disease (ARD), is a virulent primary pathogen with a broad host range. ARD is responsible for reduced forest productivity as a result of direct tree mortality and non-lethal cryptic infections that impact growth....

Annosus Root Disease Hazard Rating, Detection, and Management Strategies in the Southeastern United States

Science.gov (United States)

S. A. Alexander

1989-01-01

Annosus root disease (ARD), is the major root disease of pines in the southeastern United States where severely affected trees exhibit growth loss. Assessing the potential damage of ARD is essential for making effective disease control and management decisions. A soil hazard rating system developed to identify potential for tree mortality is described. The Annosus...

Ground verification of aerial for Port-Orford-cedar root disease in Southwest Oregon.

Science.gov (United States)

A. Kanaskie; M. McWilliams; D. Overhulser; J. Prukop; R. Christian; S. Malvitch

2002-01-01

Port-Orford-cedar (POC) (Chamaecyparis lawsoniana) is limited in its natural range to southwest Oregon and northwest California. It is highly susceptible to the introduced root pathogen, Phytophthora lateralis, which causes a fatal root disease throughout most of its range. The disease is transmitted by movement of infested soil and water and is...

Long-term effects of biennial prescribed fires on the growth of longleaf pine

Science.gov (United States)

William D. Boyer

2000-01-01

The effects of several hardwood control treatments on understory succession and overstory growth have been followed for 22 years on a Coastal Plain site in southwest Alabama. The study began in 1973, with 12 treatment combinations in 14-year-old naturally established longleaf pine (Pinus palustris) thinned to about 1,236 stems per hectare (500 stems...

Annosus Root disease of Western Conifers (FIDL)

Science.gov (United States)

Craig L. Schmitt; John R. Parmeter; John T. Kliejunas

2000-01-01

Annosus root disease is found on all western conifer species but is of most concern on true firs, hemlocks, and pines. Incense cedar, coast redwood and sequoia are sometimes infected in California. Western juniper is infected throughout its range. Annosus is common and causes extensive decay in old-growth western and mountain hemlock stands. Many mixed conifer stands...

Modeling survival, yield, volume partitioning and their response to thinning for longleaf pine plantations

Science.gov (United States)

Carlos A. Gonzalez-Benecke; Salvador A. Gezan; Daniel J. Leduc; Timothy A. Martin; Wendell P. Cropper Jr; Lisa J Samuelson

2012-01-01

Longleaf pine (Pinus palustris Mill.) is an important tree species of the southeast U.S. Currently there is no comprehensive stand-level growth and yield model for the species. The model system described here estimates site index (SI) if dominant height (Hdom) and stand age are known (inversely, the model can project H

root rot disease of five fruit tree seedlings in the nursery

African Journals Online (AJOL)

KAMALDEEN

on them. Our experience in the nursery in Port Harcourt had been that many tree species of the tropical region are susceptible to root rot diseases of fungal origin. The fungal invasion of the succulent root tissues causes the young tree seedlings to dieback; their leaves becomes discoloured, wilted and eventually dead.

Soil physical effects on longleaf pine performance in the West Gulf Coastal Plain

Science.gov (United States)

Mary Anne S. Sayer; James D. Haywood; Shi-Jean Susana Sung

2015-01-01

We summarize 8 years of soil physical property responses to herbicide manipulation of the understory in two young longleaf pine stands growing on either Ruston fine sandy loam or Beauregard silt loam soils. We also describe relationships between pine sapling vigor and the soil physical environment across a 3-year period on the Ruston soil and a 2-year period on the...

Control of Root Rot and Wilt Diseases of Roselle under Field Conditions

Science.gov (United States)

Hassan, Naglaa; Elsharkawy, Mohsen Mohamed; Shimizu, Masafumi

2014-01-01

Roselle (Hibiscus sabdariffa L.) is one of the most important medicinal crops in many parts of the world. In this study, the effects of microelements, antioxidants, and bioagents on Fusarium oxysporum, F. solani, and Macrophomina phaseolina, the causal pathogens of root rot and wilt diseases in roselle, were examined under field conditions. Preliminary studies were carried out in vitro in order to select the most effective members to be used in field control trials. Our results showed that microelements (copper and manganese), antioxidants (salicylic acid, ascorbic acid, and EDTA), a fungicide (Dithane M45) and biological control agents (Trichoderma harzianum and Bacillus subtilis) were significantly reduced the linear growth of the causal pathogens. Additionally, application of the previous microelements, antioxidants, a fungicide and biological control agents significantly reduced disease incidence of root rot and wilt diseases under field conditions. Copper, salicylic acid, and T. harzianum showed the best results in this respect. In conclusion, microelements, antioxidants, and biocontrol agents could be used as alternative strategies to fungicides for controlling root rot and wilt diseases in roselle. PMID:25606010

Arthropod density and biomass in longleaf pines: effects of pine age and hardwood midstory

Science.gov (United States)

Richard N. Conner; Christopher S. Collins; Daniel Saenz; Toni Trees; Richard R. Schaefer; D. Craig Rudolph

2004-01-01

During a 2-year study we examined arthropod communities (density and biomass) on longleaf pines (Pinus palustris) in eastern Texas during spring, summer, and winter on trees in 3 age classes: 40-50, 60-70, and 130-1 50 years, as a potential food source for the red-cockaded woodpecker (Picoides borealis). We also examined arthropod...

Effects of elevated atmospheric carbon dioxide on biomass and carbon accumulation in a model regenerating longleaf pine community.

Science.gov (United States)

Runion, G B; Davis, M A; Pritchard, S G; Prior, S A; Mitchell, R J; Torbert, H A; Rogers, H H; Dute, R R

2006-01-01

Plant species vary in response to atmospheric CO2 concentration due to differences in physiology, morphology, phenology, and symbiotic relationships. These differences make it very difficult to predict how plant communities will respond to elevated CO2. Such information is critical to furthering our understanding of community and ecosystem responses to global climate change. To determine how a simple plant community might respond to elevated CO2, a model regenerating longleaf pine community composed of five species was exposed to two CO2 regimes (ambient, 365 micromol mol(-1) and elevated, 720 micromol mol(-1)) for 3 yr. Total above- and belowground biomass was 70 and 49% greater, respectively, in CO2-enriched plots. Carbon (C) content followed a response pattern similar to biomass, resulting in a significant increase of 13.8 Mg C ha(-1) under elevated CO2. Responses of individual species, however, varied. Longleaf pine (Pinus palustris Mill.) was primarily responsible for the positive response to CO2 enrichment. Wiregrass (Aristida stricta Michx.), rattlebox (Crotalaria rotundifolia Walt. Ex Gmel.), and butterfly weed (Asclepias tuberosa L.) exhibited negative above- and belowground biomass responses to elevated CO2, while sand post oak (Quercus margaretta Ashe) did not differ significantly between CO2 treatments. As with pine, C content followed patterns similar to biomass. Elevated CO2 resulted in alterations in community structure. Longleaf pine comprised 88% of total biomass in CO2-enriched plots, but only 76% in ambient plots. In contrast, wiregrass, rattlebox, and butterfly weed comprised 19% in ambient CO2 plots, but only 8% under high CO2. Therefore, while longleaf pine may perform well in a high CO2 world, other members of this community may not compete as well, which could alter community function. Effects of elevated CO2 on plant communities are complex, dynamic, and difficult to predict, clearly demonstrating the need for more research in this

Assessing tolerance of longleaf pine understory herbaceous plants to herbicide applications in a container nursery

Science.gov (United States)

D. Paul Jackson; Scott A. Enebak; James West; Drew Hinnant

2015-01-01

Renewed efforts in longleaf pine (Pinus palustris Mill.) ecosystem restoration has increased interest in the commercial production of understory herbaceous species. Successful establishment of understory herbaceous species is enhanced when using quality nursery-grown plants that have a better chance of survival after outplanting. Nursery growing practices have not been...

Thickening of the cauda equina roots: a common finding in Krabbe disease

Energy Technology Data Exchange (ETDEWEB)

Hwang, Misun; Rodriguez, David [Department of Radiology of University of Pittsburgh Medical Center, Pittsburgh, PA (United States); Zuccoli, Giulio; Panigrahy, Ashok [Section of Neuroradiology, Children' s Hospital of Pittsburgh of University of Pittsburgh Medical Center, Pittsburgh, PA (United States); Poe, Michele D.; Escolar, Maria L. [Department of Pediatrics at Children' s Hospital of Pittsburgh of University of Pittsburgh Medical Center, Pittsburgh, PA (United States)

2016-10-15

Evaluation of Krabbe disease burden and eligibility for hematopoietic stem cell transplantation are often based on neuroimaging findings using the modified Loes scoring system, which encompasses central but not peripheral nervous system changes. We show that quantitative evaluation of thickened cauda equina nerve roots may improve the evaluation of Krabbe disease and therapeutic guidance. Lumbar spine MRI scans of patients obtained between March 2013 and September 2013 were retrospectively evaluated and compared to those of controls. Quantitative evaluation of cauda equina roots was performed on the axial plane obtained approximately 5 mm below the conus medullaris. The largest nerves in the right and left anterior quadrants of the spinal canal were acquired. Fifteen symptomatic patients with Krabbe disease (5-44 months old) and eleven age-matched controls were evaluated. The average areas (mm{sup 2}) of anterior right and left nerves were 1.40 and 1.23, respectively, for patients and 0.61 and 0.60 for controls (differences: 0.79 and 0.63; p < 0.001). Cauda equina nerve root thickening is associated with Krabbe disease in both treated and untreated patients. Adding lumbar spine MRI to the current neurodiagnostic protocols, which fails to account for peripheral nerve abnormalities, will likely facilitate the diagnosis of Krabbe disease. (orig.)

Effects of Ashwagandha (roots of Withania somnifera) on neurodegenerative diseases.

Science.gov (United States)

Kuboyama, Tomoharu; Tohda, Chihiro; Komatsu, Katsuko

2014-01-01

Neurodegenerative diseases commonly induce irreversible destruction of central nervous system (CNS) neuronal networks, resulting in permanent functional impairments. Effective medications against neurodegenerative diseases are currently lacking. Ashwagandha (roots of Withania somnifera Dunal) is used in traditional Indian medicine (Ayurveda) for general debility, consumption, nervous exhaustion, insomnia, and loss of memory. In this review, we summarize various effects and mechanisms of Ashwagandha extracts and related compounds on in vitro and in vivo models of neurodegenerative diseases such as Alzheimer's disease and spinal cord injury.

First look at smoke emissions from prescribed burns in long-unburned longleaf pine forests

Science.gov (United States)

Sheryl K. Akagi; Robert J. Yokelson; Ian R. Burling; David R. Weise; James Reardon; Shawn Urbanski; Timothy J. Johnson

2014-01-01

While fire has long played a role in the longleaf pine ecosystem, there are still some stands in the southeastern United States where fire has not been reintroduced and fuels have accumulated for 50 years or more. As part of a larger study examining fuel loading and smoke emissions on Department of Defense installations in the southeastern U.S., fuels and trace...

Potential for biocontrol of hairy root disease by a Paenibacillus clade

NARCIS (Netherlands)

Bosmans, Lien; de Bruijn, Irene; Gerards, S.; Moerkens, Rob; Van Looveren, Lore; Wittemans, Lieve; Van Calenberge, Bart; Paeleman, Anneleen; Van Kerckhove, Stef; Rozenski, Jef; de Mot, Rene; Rediers, Hans; Raaijmakers, J.M.; Lievens, Bart

2017-01-01

Rhizogenic Agrobacterium biovar 1 is the causative agent of hairy root disease (HRD) in the hydroponic cultivation of tomato and cucumber causing significant losses in marketable yield. In order to prevent and control the disease chemical disinfectants such as hydrogen peroxide or hypochlorite are

Restoration of the Native Plant Communities in Longleaf Pine Landscapes on the Kisatchie National Forest, Louisiana

Science.gov (United States)

James D. Haywood; Alton Martin; Finis L. Harris; Michael L. Elliott-Smith

1998-01-01

In January 1993, the Kisatchie National Forest and Southern Research Station began monitoring the effects of various management practices on overstory and midstory trees, shrubs, and understory woody and herbaceous vegetation in several longleaf pine (Pinus palustris Mill.) stands. The monitoring of these stands is part of several Ecosystem...

Longleaf pine site response to repeated fertilization and forest floor removal by raking and prescribed burning

Science.gov (United States)

Kim Ludovici; Robert Eaton; Stanley Zarnoch

2018-01-01

Removal of forest floor litter by pine needle raking and prescribed burning is a common practice in longleaf pine (Pinus palustris Mill.) stands on Coastal Plain sites in the Southeastern United States. Repeated removal of litter by raking and the loss of surface organic matter from controlled burns can affect the...

Stand conditions and tree characteristics affect quality of longleaf pine for red-cockaded woodpecker cavity trees

Science.gov (United States)

W.G. Ross; D.L. Kulhavy; R.N. Conner

1997-01-01

We measured resin flow of longleaf (Pinus palustris Mill.) pines in red-cockaded woodpecker (Picoides borealis Vieillot) clusters in the Angelina National Forest in Texas, and the Apalachicola National Forest in Florida. Sample trees were categorized as active cavity trees, inactive cavity trees and control trees. Sample trees were further...

Monitoring Spongospora subterranea Development in Potato Roots Reveals Distinct Infection Patterns and Enables Efficient Assessment of Disease Control Methods.

Directory of Open Access Journals (Sweden)

Tamilarasan Thangavel

Full Text Available Spongospora subterranea is responsible for significant potato root and tuber disease globally. Study of this obligate (non-culturable pathogen that infects below-ground plant parts is technically difficult. The capacity to measure the dynamics and patterns of root infections can greatly assist in determining the efficacy of control treatments on disease progression. This study used qPCR and histological analysis in time-course experiments to measure temporal patterns of pathogen multiplication and disease development in potato (and tomato roots and tubers. Effects of delayed initiation of infection and fungicidal seed tuber and soil treatments were assessed. This study found roots at all plant developmental ages were susceptible to infection but that delaying infection significantly reduced pathogen content and resultant disease at final harvest. The pathogen was first detected in roots 15-20 days after inoculation (DAI and the presence of zoosporangia noted 15-45 DAI. Following initial infection pathogen content in roots increased at a similar rate regardless of plant age at inoculation. All fungicide treatments (except soil-applied mancozeb which had a variable response suppressed pathogen multiplication and root and tuber disease. In contrast to delayed inoculation, the fungicide treatments slowed disease progress (rate rather than delaying onset of infection. Trials under suboptimal temperatures for disease expression provided valuable data on root infection rate, demonstrating the robustness of monitoring root infection. These results provide an early measure of the efficacy of control treatments and indicate two possible patterns of disease suppression by either delayed initiation of infection which then proceeds at a similar rate or diminished epidemic rate.

Monitoring Spongospora subterranea Development in Potato Roots Reveals Distinct Infection Patterns and Enables Efficient Assessment of Disease Control Methods.

Science.gov (United States)

Thangavel, Tamilarasan; Tegg, Robert S; Wilson, Calum R

2015-01-01

Spongospora subterranea is responsible for significant potato root and tuber disease globally. Study of this obligate (non-culturable) pathogen that infects below-ground plant parts is technically difficult. The capacity to measure the dynamics and patterns of root infections can greatly assist in determining the efficacy of control treatments on disease progression. This study used qPCR and histological analysis in time-course experiments to measure temporal patterns of pathogen multiplication and disease development in potato (and tomato) roots and tubers. Effects of delayed initiation of infection and fungicidal seed tuber and soil treatments were assessed. This study found roots at all plant developmental ages were susceptible to infection but that delaying infection significantly reduced pathogen content and resultant disease at final harvest. The pathogen was first detected in roots 15-20 days after inoculation (DAI) and the presence of zoosporangia noted 15-45 DAI. Following initial infection pathogen content in roots increased at a similar rate regardless of plant age at inoculation. All fungicide treatments (except soil-applied mancozeb which had a variable response) suppressed pathogen multiplication and root and tuber disease. In contrast to delayed inoculation, the fungicide treatments slowed disease progress (rate) rather than delaying onset of infection. Trials under suboptimal temperatures for disease expression provided valuable data on root infection rate, demonstrating the robustness of monitoring root infection. These results provide an early measure of the efficacy of control treatments and indicate two possible patterns of disease suppression by either delayed initiation of infection which then proceeds at a similar rate or diminished epidemic rate.

Research progress of antagonistic interactions among root canal irrigations disease

Directory of Open Access Journals (Sweden)

Chen QU

2013-07-01

Full Text Available Root canal therapy is the most effective way to treat various pulposis and periapical disease. Simple mechanical apparatus can not clean root canal thoroughly, but may affect tight filling instead. It can achieve a satisfactory cleansing effect only when it is combined with a chemical solution. Irrigation fluid for root canal should possess the properties of tissue dissolution, antimicrobial, lubrication, and removal of smear layer. So far, no solution is able to fulfill all these functions. Therefore, a combined use of multiple irrigation solutions is suggested. It can not only achieve good effect in cleaning and disinfection, also it can lower the concentration of different solutions, thus reducing the side effects. Nevertheless, some experiments proved that antagonism existed among the chemicals used for irrigations. The purpose of present article is to review the antagonistic effect among the chemicals used for irrigation when they are used together for root canal treatment.

Pathological and rhizospherical studies on root-rot disease of ...

African Journals Online (AJOL)

Isolations from diseased squash roots revealed the presence of Alternaria tenuis, Aspergillus niger, Fusarium oxysporum, F. solani and Rhizoctonia solani. The last two fungi were more frequent than any of the other fungi. Pathogenicity tests proved that squash plants were highly vulnerable to attack by Fusarium solani and ...

Comparison of arthropod prey of red-cockaded woodpeckers on the boles of long-leaf and loblolly pines

Science.gov (United States)

Scott Horn; James L. Hanula

2002-01-01

Red-cockaded woodpeckers (Picoides borealis) forage on the boles of most southern pines. Woodpeckers may select trees based on arthropod availability, yet no published studies have evaluated differences in arthropod abundance on different species of pines. We used knockdown insecticides to sample arthropods on longleaf (Pinus palustris...

Black stain root disease studies on ponderosa pine parameters and disturbance treatments affecting infection and mortality

Science.gov (United States)

W.J. Otrosina; J.T. Kliejunas; S. Smith; D.R. Cluck; S.S. Sung; C.D. Cook

2007-01-01

Black stain root disease of ponderosa pine (Pinus ponderosa Doug. Ex Laws.), caused by Leptographium wageneri var. ponderosum (Harrington & Cobb) Harrington & Cobb, is increasing on many eastside Sierra Nevada pine stands in northeastern California. The disease is spread from tree to tree via root...

Studies on black stain root disease in ponderosa pine. pp. 236-240. M. Garbelotto & P. Gonthier (Editors). Proceedings 12th International Conference on Root and Butt Rots of Forest Trees.

Science.gov (United States)

W. J. Otrosina; J. T. Kliejunas; S. S. Sung; S. Smith; D. R. Cluck

2008-01-01

Black stain root disease of ponderosa pine, caused by Lepfographium wageneri var. ponderosum (Harrington & Cobb) Harrington & Cobb, is increasing on many eastside pine stands in northeastern California. The disease is spread from tree to tree via root contacts and grafts but new infections are likely vectored by root...

The ecological classification of coastal wet longleaf pine (pinus palustris) of Florida from reference conditions

Science.gov (United States)

George L. McCaskill; Jose. Shibu

2012-01-01

Tropical storms, fire, and urbanization have produced a heavily fragmented forested landscape along Florida’s Gulf coast. The longleaf pine forest, one of the most threatened ecosystems in the US, makes up a major part of this fragmented landscape. These three disturbance regimes have produced a mosaic of differently-aged pine patches of single or two cohort structures...

The Effect of Low Oxygen Stress on Phytophthora cinnamomi Infection and Disease of Cork Oak Roots

Science.gov (United States)

Karel A. Jacobs; James D. MacDonald; Alison M. Berry; Laurence R. Costello

1997-01-01

The incidence and severity of Phytophthora cinnamomi Rands root disease was quantified in cork oak (Quercus suber L.) roots subjected to low oxygen (hypoxia) stress. Seedling root tips were inoculated with mycelial plugs of the fungus and incubated in ≤1, 3-4, or 21 percent oxygen for 5 days. Ninety-four percent of roots...

Old resinous turpentine stumps as an indicator of the range of longleaf pine in Southeastern Virginia

Science.gov (United States)

Thomas L. Eberhardt; Philip M. Sheridan; Jolie M. Mahfouz; Chi-Leung So

2006-01-01

Wood anatomy cannot be used to differentiate between the southern yellow pine species. Wood samples collected from old resinous turpentine stumps in coastal Virginia were subjected to chemical and spectroscopic analyses in an effort to determine if they could be identified as longleaf pine. The age and resinous nature of the samples were manifested in high specific...

The influence of canopy, sky condition, and solar angle on light quality in a longleaf pine woodland

Science.gov (United States)

Stephen D. Pecot; Stephen B. Horsley; Michael A. Battaglia; Robert J. Mitchell

2005-01-01

Light transmittance estimates under open, heterogeneous woodland canopies such as those of longleaf pine (Pinus palustris Mill.) forests report high spatial and temporal variation in the quantity of the light environment. In addition, light quality, that is, the ratio of red to far-red light (R:FR), regulates important aspects of plant...

Occurrence of Root Rot and Vascular Wilt Diseases in Roselle (Hibiscus sabdariffa L.) in Upper Egypt.

Science.gov (United States)

Hassan, Naglaa; Shimizu, Masafumi; Hyakumachi, Mitsuro

2014-03-01

Roselle (Hibiscus sabdariffa L.) family Malvaceae is an important crop used in food, cosmetics and pharmaceutics industries. Roselle is cultivated mainly in Upper Egypt (Qena and Aswan governorates) producing 94% of total production. Root rot disease of roselle is one of the most important diseases that attack both seedlings and adult plants causing serious losses in crop productivity and quality. The main objective of the present study is to identify and characterize pathogens associated with root rot and wilt symptoms of roselle in Qena, Upper Egypt and evaluate their pathogenicity under greenhouse and field condition. Fusarium oxysporum, Macrophomina phaseolina, Fusarium solani, Fusarium equiseti and Fusarium semitectum were isolated from the natural root rot diseases in roselle. All isolated fungi were morphologically characterized and varied in their pathogenic potentialities. They could attack roselle plants causing damping-off and root rot/wilt diseases in different pathogenicity tests. The highest pathogenicity was caused by F. oxysporum and M. phaseolina followed by F. solani. The least pathogenic fungi were F. equiseti followed by F. semitectum. It obviously noted that Baladi roselle cultivar was more susceptible to infection with all tested fungi than Sobhia 17 under greenhouse and field conditions. This is the first report of fungal pathogens causing root rot and vascular wilt in roselle in Upper Egypt.

First report of Armillaria root disease caused by Armillaria tabescens on Araucaria araucana in Veracruz, Mexico

Science.gov (United States)

M.-S. Kim; N. B. Klopfenstein; J. W. Hanna; P. Cannon; R. Medel; A. Lopez

2010-01-01

In September 2007, bark samples were collected from the root collar of a single Araucaria araucana tree that had recently died and was suspected of being killed by Armillaria root disease. Disease symptoms and signs included a thinning crown and fruiting bodies at the tree base over a several-year period before tree death.

Fire Frequency Effects on Longleaf Pine (Pinus palustris P. Miller) Vegetation in South Carolina and Northeast Florida, USA

Science.gov (United States)

Jeff S. Glitzenstein; Donna R. Streng; Dale D. Wade

2003-01-01

Southeastern United States habitats dominated by longleaf pine (Pinus pulutris P. Miller) have declined precipitously in area and extent. Conservation of diverse ground-layer vegetation in these endangered habitats depends on prescribed fire. While the need for prescribed fire is now generally accepted, there is disagreement concerning the most...

[Research progress in root rot diseases of Chinese herbal medicine and control strategy by antagonistic microorganisms].

Science.gov (United States)

Gao, Fen; Ren, Xiao-xia; Wang, Meng-liang; Qin, Xue-mei

2015-11-01

In recent years, root rot diseases of Chinese herbal medicine have been posing grave threat to the development of the traditional Chinese medicine industry. This article presents a review on the occurring situation of the root rot disease, including the occurrence of the disease, the diversity of the pathogens, the regional difference in dominant pathogens,and the complexity of symptoms and a survey of the progress in bio-control of the disease using antagonistic microorganisms. The paper also discusses the existing problems and future prospects in the research.

Effects of spring prescribed fire on short-term, leaf-level photosynthesis and water use efficiency in longleaf pine

Science.gov (United States)

John K. Jackson; Dylan N. Dillaway; Michael C. Tyree; Mary Anne Sword Sayer

2015-01-01

Fire is a natural and important environmental disturbance influencing the structure, function, and composition of longleaf pine (Pinus palustris Mill.) ecosystems. However, recovery of young pines to leaf scorch may involve changes in leaf physiology, which could influence leaf water-use efficiency (WUE). This work is part of a larger seasonal...

Occurrence of Root Rot and Vascular Wilt Diseases in Roselle (Hibiscus sabdariffa L.) in Upper Egypt

Science.gov (United States)

Hassan, Naglaa; Shimizu, Masafumi

2014-01-01

Roselle (Hibiscus sabdariffa L.) family Malvaceae is an important crop used in food, cosmetics and pharmaceutics industries. Roselle is cultivated mainly in Upper Egypt (Qena and Aswan governorates) producing 94% of total production. Root rot disease of roselle is one of the most important diseases that attack both seedlings and adult plants causing serious losses in crop productivity and quality. The main objective of the present study is to identify and characterize pathogens associated with root rot and wilt symptoms of roselle in Qena, Upper Egypt and evaluate their pathogenicity under greenhouse and field condition. Fusarium oxysporum, Macrophomina phaseolina, Fusarium solani, Fusarium equiseti and Fusarium semitectum were isolated from the natural root rot diseases in roselle. All isolated fungi were morphologically characterized and varied in their pathogenic potentialities. They could attack roselle plants causing damping-off and root rot/wilt diseases in different pathogenicity tests. The highest pathogenicity was caused by F. oxysporum and M. phaseolina followed by F. solani. The least pathogenic fungi were F. equiseti followed by F. semitectum. It obviously noted that Baladi roselle cultivar was more susceptible to infection with all tested fungi than Sobhia 17 under greenhouse and field conditions. This is the first report of fungal pathogens causing root rot and vascular wilt in roselle in Upper Egypt. PMID:24808737

Modeling silviculture after natural disturbance to sustain biodiversity in the longleaf pine (Pinus palustris) ecosystem : balancing complexity and implementation

Science.gov (United States)

Brian J. Palik; Robert J. Mitchell; J. Kevin Hiers

2002-01-01

Modeling silviculture after natural disturbance to maintain biodiversity is a popular concept, yet its application remains elusive. We discuss difficulties inherent to this idea, and suggest approaches to facilitate implementation, using longleaf pine (Pinus palustris) as an example. Natural disturbance regimes are spatially and temporally variable. Variability...

Experimental minimum threshold for Phytophthora cinnamomi root disease expression on Quercus suber

Directory of Open Access Journals (Sweden)

María Socorro SERRANO

2015-12-01

Full Text Available Quercus suber seedlings were potted in soils infested with increasing concentrations of Phytophthora cinnamomi chlamydospores and submitted to weekly flooding for 3 months to favour root infections. Increasing quantities of chlamydospores led to an exponential increase in their ability to germinate. Root symptoms (necrosis and/or absence of feeder roots were significantly more severe than those recorded in uninfested soil only for plants potted in soils infested with 61 cfu g-1 or more. Although generated using potting mix, this minimum threshold represents a tool for checking the potential infectivity of infested soils or to assess the effectiveness of some control methods to reduce soil inoculum. However, a low level of root infection was recorded even at 3 cfu g-1. Therefore, long-term disease risk may be present whenever the pathogen is detectable in oak forest soils.

Root interactions in a maize/soybean intercropping system control soybean soil-borne disease, red crown rot.

Directory of Open Access Journals (Sweden)

Xiang Gao

Full Text Available BACKGROUND: Within-field multiple crop species intercropping is well documented and used for disease control, but the underlying mechanisms are still unclear. As roots are the primary organ for perceiving signals in the soil from neighboring plants, root behavior may play an important role in soil-borne disease control. PRINCIPAL FINDINGS: In two years of field experiments, maize/soybean intercropping suppressed the occurrence of soybean red crown rot, a severe soil-borne disease caused by Cylindrocladium parasiticum (C. parasiticum. The suppressive effects decreased with increasing distance between intercropped plants under both low P and high P supply, suggesting that root interactions play a significant role independent of nutrient status. Further detailed quantitative studies revealed that the diversity and intensity of root interactions altered the expression of important soybean PR genes, as well as, the activity of corresponding enzymes in both P treatments. Furthermore, 5 phenolic acids were detected in root exudates of maize/soybean intercropped plants. Among these phenolic acids, cinnamic acid was released in significantly greater concentrations when intercropped maize with soybean compared to either crop grown in monoculture, and this spike in cinnamic acid was found dramatically constrain C. parasiticum growth in vitro. CONCLUSIONS: To the best of our knowledge, this study is the first report to demonstrate that intercropping with maize can promote resistance in soybean to red crown rot in a root-dependent manner. This supports the point that intercropping may be an efficient ecological strategy to control soil-borne plant disease and should be incorporated in sustainable agricultural management practices.

The Development and Validation of an Alternative Assessment to Measure Changes in Understanding of the Longleaf Pine Ecosystem

Science.gov (United States)

Dentzau, Michael W.; Martínez, Alejandro José Gallard

2016-01-01

A drawing assessment to gauge changes in fourth grade students' understanding of the essential components of the longleaf pine ecosystem was developed to support an out-of-school environmental education program. Pre- and post-attendance drawings were scored with a rubric that was determined to have content validity and reliability among users. In…

Developing and Testing a Robust, Multi-Scale Framework for the Recovery of Longleaf Pine Understory Communities

Science.gov (United States)

2015-05-01

effects on seed germination of native and invasive Eastern deciduous forest understory plants. Forest Ecology and Management 261:1401–1408. Estes, J...Defense, Washington Headquarters Services, Directorate for Information Operations and Reports (0704-0188), 1215 Jefferson Davis Highway, Suite 1204...in longleaf pine savannas. Figure 3.3.2. Results of multivariate classification and regression tree analysis. Figure 3.3.3. Comparison of Classes

Land-Use History and Contemporary Management Inform an Ecological Reference Model for Longleaf Pine Woodland Understory Plant Communities.

Energy Technology Data Exchange (ETDEWEB)

Brudvig, Lars A. [Department of Plant Biology, Michigan State University; Orrock, John L. [Department of Zoology, University of Wisconsin; Damschen, Ellen I. [Department of Zoology, University of Wisconsin; et al, et al

2014-01-23

Ecological restoration is frequently guided by reference conditions describing a successfully restored ecosystem; however, the causes and magnitude of ecosystem degradation vary, making simple knowledge of reference conditions insufficient for prioritizing and guiding restoration. Ecological reference models provide further guidance by quantifying reference conditions, as well as conditions at degraded states that deviate from reference conditions. Many reference models remain qualitative, however, limiting their utility. We quantified and evaluated a reference model for southeastern U.S. longleaf pine woodland understory plant communities. We used regression trees to classify 232 longleaf pine woodland sites at three locations along the Atlantic coastal plain based on relationships between understory plant community composition, soils lol(which broadly structure these communities), and factors associated with understory degradation, including fire frequency, agricultural history, and tree basal area. To understand the spatial generality of this model, we classified all sites together. and for each of three study locations separately. Both the regional and location-specific models produced quantifiable degradation gradients–i.e., progressive deviation from conditions at 38 reference sites, based on understory species composition, diversity and total cover, litter depth, and other attributes. Regionally, fire suppression was the most important degrading factor, followed by agricultural history, but at individual locations, agricultural history or tree basal area was most important. At one location, the influence of a degrading factor depended on soil attributes. We suggest that our regional model can help prioritize longleaf pine woodland restoration across our study region; however, due to substantial landscape-to-landscape variation, local management decisions should take into account additional factors (e.g., soil attributes). Our study demonstrates the utility

Land-Use History and Contemporary Management Inform an Ecological Reference Model for Longleaf Pine Woodland Understory Plant Communities

Science.gov (United States)

Brudvig, Lars A.; Orrock, John L.; Damschen, Ellen I.; Collins, Cathy D.; Hahn, Philip G.; Mattingly, W. Brett; Veldman, Joseph W.; Walker, Joan L.

2014-01-01

Ecological restoration is frequently guided by reference conditions describing a successfully restored ecosystem; however, the causes and magnitude of ecosystem degradation vary, making simple knowledge of reference conditions insufficient for prioritizing and guiding restoration. Ecological reference models provide further guidance by quantifying reference conditions, as well as conditions at degraded states that deviate from reference conditions. Many reference models remain qualitative, however, limiting their utility. We quantified and evaluated a reference model for southeastern U.S. longleaf pine woodland understory plant communities. We used regression trees to classify 232 longleaf pine woodland sites at three locations along the Atlantic coastal plain based on relationships between understory plant community composition, soils (which broadly structure these communities), and factors associated with understory degradation, including fire frequency, agricultural history, and tree basal area. To understand the spatial generality of this model, we classified all sites together and for each of three study locations separately. Both the regional and location-specific models produced quantifiable degradation gradients–i.e., progressive deviation from conditions at 38 reference sites, based on understory species composition, diversity and total cover, litter depth, and other attributes. Regionally, fire suppression was the most important degrading factor, followed by agricultural history, but at individual locations, agricultural history or tree basal area was most important. At one location, the influence of a degrading factor depended on soil attributes. We suggest that our regional model can help prioritize longleaf pine woodland restoration across our study region; however, due to substantial landscape-to-landscape variation, local management decisions should take into account additional factors (e.g., soil attributes). Our study demonstrates the utility of

Land-use history and contemporary management inform an ecological reference model for longleaf pine woodland understory plant communities.

Directory of Open Access Journals (Sweden)

Lars A Brudvig

Full Text Available Ecological restoration is frequently guided by reference conditions describing a successfully restored ecosystem; however, the causes and magnitude of ecosystem degradation vary, making simple knowledge of reference conditions insufficient for prioritizing and guiding restoration. Ecological reference models provide further guidance by quantifying reference conditions, as well as conditions at degraded states that deviate from reference conditions. Many reference models remain qualitative, however, limiting their utility. We quantified and evaluated a reference model for southeastern U.S. longleaf pine woodland understory plant communities. We used regression trees to classify 232 longleaf pine woodland sites at three locations along the Atlantic coastal plain based on relationships between understory plant community composition, soils (which broadly structure these communities, and factors associated with understory degradation, including fire frequency, agricultural history, and tree basal area. To understand the spatial generality of this model, we classified all sites together and for each of three study locations separately. Both the regional and location-specific models produced quantifiable degradation gradients-i.e., progressive deviation from conditions at 38 reference sites, based on understory species composition, diversity and total cover, litter depth, and other attributes. Regionally, fire suppression was the most important degrading factor, followed by agricultural history, but at individual locations, agricultural history or tree basal area was most important. At one location, the influence of a degrading factor depended on soil attributes. We suggest that our regional model can help prioritize longleaf pine woodland restoration across our study region; however, due to substantial landscape-to-landscape variation, local management decisions should take into account additional factors (e.g., soil attributes. Our study demonstrates

Modeling the effects of forest management on in situ and ex situ longleaf pine forest carbon stocks

Science.gov (United States)

C.A. Gonzalez-Benecke; L.J. Samuelson; T.A. Martin; W.P. Cropper Jr; Kurt Johnsen; T.A. Stokes; John Butnor; P.H. Anderson

2015-01-01

Assessment of forest carbon storage dynamics requires a variety of techniques including simulation models. We developed a hybrid model to assess the effects of silvicultural management systems on carbon (C) budgets in longleaf pine (Pinus palustris Mill.) plantations in the southeastern U.S. To simulate in situ C pools, the model integrates a growth and yield model...

Effects of container cavity size and copper coating on field performance of container-grown longleaf pine seedlings

Science.gov (United States)

Shi-Jean Susana Sung; James D. Haywood; Mary A. Sword-Sayer; Kristina F. Connor; D. Andrew Scott

2010-01-01

Longleaf pine (Pinus palustris Mill.) seedlings were grown for 27 weeks in 3 container cavity sizes [small (S), medium (M), and large (L)], and half the containers were coated with copper (Cu). In November 2004, we planted 144 seedlings from each of 6 container treatments in each of 4 replications in central LA. All plots were burned in February 2006...

Absorption and translocation of 32P through root feeding by root (Wilt) affected coconut palms

International Nuclear Information System (INIS)

Beena George, S.; Moossa, P.P.; Sureshkumar, P.

2017-01-01

An investigation was carried out during 2015-16 to study the absorption and translocation of 32 P by root (wilt) affected coconut palms through root feeding in the Department of Soil Science and Agricultural Chemistry, College of Horticulture, Vellanikkara. Root (wilt) is one of the major diseases affecting coconut production in India. Etiology of the disease has been examined from several angles and it was found that nutrition imbalance in association with root (wilt) and it remains so even if integrated nutrient management practices are applied to diseased palms. Absorption and translocation of nutrients in three different types of coconut palms (healthy, apparently healthy and diseased palms) were studied using radioactive phosphorusin laterite soil. Ten morphologically uniform palms of same age were selected from each type of palms. Four active young roots were excavated from each palm and 32 P was applied by root feeding and index leaves were radio assayed for 32 P count at 24 hours, 15 and 30 days after application. The results revealed that healthy palms recorded significantly higher count rate(581 to 25158.66 cpm g -1 ) with root feeding compared to diseased palms(263 to 1068.38 cpm g - 1 ). From the present study it was clear that root (wilt) disease cannot be managed by soil application of nutrients because roots of the diseased palms are not able to translocate these nutrients. Since nutrient imbalance was one of the major problems noticed in root (wilt) affected palms, further study is required to find out proper method of nutrient application. (author)

Competitive responses of seedlings and understory plants in longleaf pine woodlands: separating canopy influences above and below ground

Science.gov (United States)

Stephen D. Pecot; Robert J. Mitchell; Brian J. Palik; Barry Moser; J. Kevin Hiers

2007-01-01

A trenching study was used to investigate above- and below-ground competition in a longleaf pine (Pinus palustris P. Mill.) woodland. Trenched and nontrenched plots were replicated in the woodland matrix, at gap edges, and in gap centers representing a range of overstory stocking. One-half of each plot received a herbicide treatment to remove the...

Basal Root Rot, a new Disease of Teak (Tectona grandis in Malaysia caused by Phellinus noxius

Directory of Open Access Journals (Sweden)

Mohd Farid, A.

2005-01-01

Full Text Available Basal root rot of teak was first reported from Sabak Bernam, Selangor making this the first report of the disease on teak in Peninsular Malaysia. The fungus found associated with the disease was Phellinus noxious. The disease aggressively killed its host irrespective of the host health status. Bark depression at the root collar which was visible from a distance was the characteristic symptom and the main indicator in identifying the disease in the plantation since above ground symptoms of the canopy could not be differentiated from crowns of healthy trees. However, although above ground symptoms were not easily discernible, the disease was already advanced and the trees mostly beyond treatment; 3.4 % of the trees in the plantation were affected and the disease occurred both on solitary trees and in patches. Below ground, infected trees had rotted root systems, mainly below and around the collar region with brown discolored wood and irregular golden-brown honeycomb-like pockets of fungal hyphae in the wood. Pathogenicity tests showed that the fungus produced symptoms similar to those observed in the plantation and killed two year-old teak plants. The disease killed all the inoculated hosts within three months, irrespective of wounded or unwounded treatments.

Fire, herbicide, and chainsaw felling effects on arthropods in fire-suppressed longleaf pine sandhills at Eglin Air Force Base, Florida

Science.gov (United States)

Louis Provencher; Krista E. M. Galley; Andrea R. Litt; Doria R. Gordon; Leonard A. Brennan; George W. Tanner; Jeffrey L. Hardesty

2002-01-01

Experimentally evaluating the success of hardwood reduction techniques against a "model" reference condition of longleaf pine sandhill communities is not directly possible because reference sites are not randomized or replicated. We addressed this issue by measuring the similarity of arthropods in treatment (fire, herbicide, felling/girdling, and control) and...

Fuels planning: science synthesis and integration; environmental consequences fact sheet 13: Root Disease Analyzer-Armillaria Response Tool (ART)

Science.gov (United States)

Geral I. McDonald; Philip D. Tanimoto; Thomas M. Rice; David E. Hall; Jane E. Stewart; Paul J. Zambino; Jonalea R. Tonn; Ned B. Klopfenstein; Mee-Sook Kim

2005-01-01

The Root Disease Analyzer-Armillaria Response Tool (ART) is a Web-based tool that estimates Armillaria root disease risk in dry forests of the Western United States. This fact sheet identifies the intended users and uses, required inputs, what the model does and does not do, and tells the user how to obtain the model.

Root Rot Disease of Five Fruit Tree Seedlings in the Nursery ...

African Journals Online (AJOL)

The incidence of root rot disease in the nursery of Chrysophyllum albidun Dacryodes edulis, persea Americana, Irvingia gabonensis and Annona muricala was assessed. Ten fungal pathogen were isolated using serial dilution and pathogenicity tests were carried out on the 5 fruit trees with the 10 isolated fungi. The 5 fruit ...

Long-term effects of fire and fire-return interval on population structure and growth of longleaf pine (Pinus palustris)

Science.gov (United States)

Chelcy R. Ford; Emily S. Minor; Gordon A. Fox

2010-01-01

We investigated the effect of fire and fire frequency on stand structure and longleaf pine (Pinus palustris P. Mill.) growth and population demography in an experimental research area in a southwest Florida sandhill community. Data were collected from replicated plots that had prescribed fire-return intervals of 1, 2, 5, or 7 years or were left...

Influence of residual basal area on longleaf pine (Pinus palustris Mill.) first year germination and establishment under selection silviculture

Science.gov (United States)

Ferhat Kara; Edward F. Loewenstein

2015-01-01

Even-aged silvicultural methods have been successfully used to manage longleaf pine (Pinus palustris Mill.) forests for wood production; however, successful use of uneven-aged methods to manage this ecosystem is less well documented. In this study, the effects of varying levels of residual basal area (RBA) (9.2, 13.8, and 18.4 m2...

Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

Science.gov (United States)

Macedo, Renan; Sales, Lilian Patrícia; Yoshida, Fernanda; Silva-Abud, Lidianne Lemes; Lobo, Murillo

2017-01-01

Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%). Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070) was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

Directory of Open Access Journals (Sweden)

Renan Macedo

Full Text Available Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%. Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070 was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

Clinical potential and limitation of MRI for degenerative lumbar spinal diseases. Comparison of MRI, myelography, CT and selective nerve root infiltration

Energy Technology Data Exchange (ETDEWEB)

Seki, Michihiro; Kikuchi, Shinichi [Fukushima Medical Coll. (Japan)

1994-12-01

To assess the clinical potential and limitations of magnetic resonance imaging (MRI) in degenerative lumbar spinal diseases, the findings of MR imaging were compared with those of myelography and CT. The subjects were 80 patients with intervertebral disc herniation (46), spondylosis (28), degenerative spondylolisthesis (5), and spondylolysis (one). There was a good correlation between sagittal MRI (T1-weighted images) and myelography in measuring the anteroposterior diameter and the compression rate of the injured dural canal in all disease categories. However, MRI was inferior, irrespective of sagittal and coronal images, to myelography in detecting blocking of the dural canal and intradural findings such as redundant nerve roots. MRI was inferior to selective nerve root infiltration in visualizing the compression of the nerve root, irrespective of diseases; however, there was no difference in abnormal findings of the running of nerve root between the two modalities. Transverse MRI was superior to CT in visualizing the nerve root. Thus, MRI alone is insufficient for the diagnosis of degenerative lumbar spinal diseases, and the other modalities should be supplementary for pathophysiological understanding of these diseases. (N.K.).

Clinical potential and limitation of MRI for degenerative lumbar spinal diseases. Comparison of MRI, myelography, CT and selective nerve root infiltration

International Nuclear Information System (INIS)

Seki, Michihiro; Kikuchi, Shinichi

1994-01-01

To assess the clinical potential and limitations of magnetic resonance imaging (MRI) in degenerative lumbar spinal diseases, the findings of MR imaging were compared with those of myelography and CT. The subjects were 80 patients with intervertebral disc herniation (46), spondylosis (28), degenerative spondylolisthesis (5), and spondylolysis (one). There was a good correlation between sagittal MRI (T1-weighted images) and myelography in measuring the anteroposterior diameter and the compression rate of the injured dural canal in all disease categories. However, MRI was inferior, irrespective of sagittal and coronal images, to myelography in detecting blocking of the dural canal and intradural findings such as redundant nerve roots. MRI was inferior to selective nerve root infiltration in visualizing the compression of the nerve root, irrespective of diseases; however, there was no difference in abnormal findings of the running of nerve root between the two modalities. Transverse MRI was superior to CT in visualizing the nerve root. Thus, MRI alone is insufficient for the diagnosis of degenerative lumbar spinal diseases, and the other modalities should be supplementary for pathophysiological understanding of these diseases. (N.K.)

Incidence of root rot diseases of soybean in Multan Pakistan and its management by the use of plant growth promoting rhizobacteria

International Nuclear Information System (INIS)

Haq, M.I.; Tahir, M.I.; Mahmood, S.

2012-01-01

Eight villages in Multan district were surveyed to record incidence of disease and losses of soybean (Glycine max L.) caused by root rot fungi. The root incidence ranged 10-17% and losses ranged 6.75-15.5%. The evaluation of four PGPR isolates was used in combination with organic amendment for the management of root-rot disease incidence and to reduce the population of root pathogenic fungi and to increase the yield in field. This study demonstrated effective biological control by the PGPR isolates tested, thereby indicating the possibility of application of rhizobacteria for control of soil bor ne diseases of soybean in Pakistan and other countries. (author)

Effects of site preparation treatments on early growth and survival of planted longleaf pine (Pinus palustris Mill.) seedlings in North Carolina

Science.gov (United States)

Benjamin O. Knapp; G. Geoff Wang; Joan L. Walker; Susan Cohen

2006-01-01

We tested the effects of eight site preparation treatments on early growth and survival of container-grown longleaf pine (Pinus palustris Mill.) seedlings. Treatments included an untreated check, six combinations of two initial vegetation control treatments (chopping or herbicide) with three planting site conditions (flat [no additional treatment],...

The preventive Control of White Root Rot Disease in Small Holder Rubber Plantation Using Botanical, Biological and Chemical Agents

Directory of Open Access Journals (Sweden)

Joko Prasetyo

2014-03-01

Full Text Available The preventive control of white root rot disease in small holder plantation using botanical, biological, and chemical agents. A field and laboratory experiment were conducted from June 2008 to December 2009 in Panumangan, Tulang Bawang - Lampung. The  field experiment was intended to evaluate the effect of  botanical plants (Alpinia galanga, Sansiviera auranthii, and Marantha arundinacea, biological agents (organic matter and Trichoderma spp., and chemical agents (lime and natural sulphur on the incidence of white root rot disease and population of some soil microbes. The laboratory experiment was conducted  to observe the mechanism of botanical agents  in controlling white root rot disease. In the field experiment, the treatments were applied  in the experimental plot with cassava plant infection as the indicator. The variables  examined were the incidence of  white root rot and population of soil microbes. In the laboratory experiment, culture of R. microporus was grown in PDA containing root exudate of the antagonistic plant (botanical agent. The variable examined was colony diameter of R. microporus growing in the PDA plates. The results of the  field experiment  showed that planting of the botanical agents, and application of Trichoderma spp., as well as natural sulphur, decreased the incidence of white root rot disease. The effectiveness of M. arundinacea and Trichoderma spp. was comparable to natural  sulphur. The laboratory experiment showed only root exudate of  A. galanga and  S. auranthii that were significantly inhibit the growth of R. microporus.

The Growth of Root Rot Disease on Pepper Seed Applied by Trichoderma Harzianum Inoculum

Directory of Open Access Journals (Sweden)

S. Sofian

2013-06-01

Full Text Available Normal 0 false false false IN X-NONE X-NONE MicrosoftInternetExplorer4 Root rot disease on pepper caused by Phytophthora capsici is one of the most important diseases on pepper. The using of antagonistic fungus of Trichoderma harzianum as a biological control agent of the pathogen is one of the important alternatives in controlling P. capsici without causing negative effects on the environment. The objectives of the research were to study about the ability of T. harzianum inoculum application in inhibiting the development of root-rot disease, influenced the growth of pepper seed, to studythe effective length time application of T. harzianum inoculum in inhibiting the development of root rot disease, and increased the growth of pepper seedlings. This research was arranged in a completely randomized design, with five treatments of length time application of T. harzianum inoculum i.e. control treatment without applicationtime of T. harzianum inoculum (K, application time of T. harzianum inoculum for 0 week (S0, application time of T. harzianum inoculum for 1 week (S1, application time of T. harzianum inoculum for two weeks (S2, application time of T. harzianum inoculum for three weeks (S3, and application time of T. harzianum inoculum for 4 weeks (S4 before planting. Each treatment was repeated15 times. The observed parameterswere disease percentage, the inhibition of antagonistic fungus, disease infection rate, plant height, number of leaves, wet and dry weight of plant, stem and leaves on pepper seed, and P. capsici population density. The result showed that application time of T. harzianum inoculumfor 4 weeks (S4 before planting is the most effective time in inhibiting the development of root rot disease than the other treatment sand also had significant effect on increasing the growth of pepper seed. The antagonism test showed that T. harzianum could inhibit P. capsiciin vitro. This result proves that application time of T. harzianum inoculums

Monoterpene persistence in the sapwood and heartwood of longleaf pine stumps: assessment of differences in composition and stability under field conditions

Science.gov (United States)

Thomas L. Eberhardt; Philip M. Sheridan; Jolie M. Mahfouz

2009-01-01

Monoterpenes in exudates, phloem and sapwood have received considerable attention relative to the active defenses of pine trees. However, little is known about the composition and function of the heartwood monoterpenes. To address this deficiency, monoterpene contents and relative compositions were determined for sapwood and heartwood samples from longleaf pine (Pinus...

Effects of canopy treatments on early growth of planted longleaf pine seedlings and ground vegetation in North Carolina: a preliminary study

Science.gov (United States)

Huifeng Hu; Benjamin O. Knapp; G. Geoff Wang; Joan L. Walker

2013-01-01

We installed a field experiment to support the development of protocols to restore longleaf pine (Pinus palustris Mill.) to existing mature loblolly pine (P. taeda L.) stands at Camp Lejeune, NC. Seven canopy treatments included four uniform and three gap treatments. The four uniform treatments were defined by target residual basal...

Effects of Atmospheric CO2 Enrichment on Soil CO2 Efflux in a Young Longleaf Pine System

OpenAIRE

Runion, G. Brett; Butnor, J. R.; Prior, S. A.; Mitchell, R. J.; Rogers, H. H.

2012-01-01

The southeastern landscape is composed of agricultural and forest systems that can store carbon (C) in standing biomass and soil. Research is needed to quantify the effects of elevated atmospheric carbon dioxide (CO2) on terrestrial C dynamics including CO2 release back to the atmosphere and soil sequestration. Longleaf pine savannahs are an ecologically and economically important, yet understudied, component of the southeastern landscape. We investigated the effects of ambient and elevated C...

Survey of Armillaria spp. in the Oregon East Cascades: Baseline data for predicting climatic influences on Armillaria root disease

Science.gov (United States)

J. W. Hanna; A. L. Smith; H. M. Maffei; M.-S. Kim; N. B. Klopfenstein

2008-01-01

Root disease pathogens, such as Armillaria solidipes Peck (recently recognized older name for A. ostoyae), will likely have increasing impacts to forest ecosystems as trees undergo stress due to climate change. Before we can predict future impacts of root disease pathogens, we must first develop an ability to predict current distributions of the pathogens (and their...

Thermal biology of eastern box turtles in a longleaf pine system managed with prescribed fire.

Science.gov (United States)

Roe, John H; Wild, Kristoffer H; Hall, Carlisha A

2017-10-01

Fire can influence the microclimate of forest habitats by removing understory vegetation and surface debris. Temperature is often higher in recently burned forests owing to increased light penetration through the open understory. Because physiological processes are sensitive to temperature in ectotherms, we expected fire-maintained forests to improve the suitability of the thermal environment for turtles, and for turtles to seasonally associate with the most thermally-optimal habitats. Using a laboratory thermal gradient, we determined the thermal preference range (T set ) of eastern box turtles, Terrapene carolina, to be 27-31°C. Physical models simulating the body temperatures experienced by turtles in the field revealed that surface environments in a fire-maintained longleaf pine forest were 3°C warmer than adjacent unburned mixed hardwood/pine forests, but the fire-maintained forest was never of superior thermal quality owing to wider T e fluctuations above T set and exposure to extreme and potentially lethal temperatures. Radiotracked turtles using fire-managed longleaf pine forests maintained shell temperatures (T s ) approximately 2°C above those at a nearby unburned forest, but we observed only moderate seasonal changes in habitat use which were inconsistent with thermoregulatory behavior. We conclude that turtles were not responding strongly to the thermal heterogeneity generated by fire in our system, and that other aspects of the environment are likely more important in shaping habitat associations. Copyright © 2017 Elsevier Ltd. All rights reserved.

GmPGIP3 enhanced resistance to both take-all and common root rot diseases in transgenic wheat.

Science.gov (United States)

Wang, Aiyun; Wei, Xuening; Rong, Wei; Dang, Liang; Du, Li-Pu; Qi, Lin; Xu, Hui-Jun; Shao, Yanjun; Zhang, Zengyan

2015-05-01

Take-all (caused by the fungal pathogen Gaeumannomyces graminis var. tritici, Ggt) and common root rot (caused by Bipolaris sorokiniana) are devastating root diseases of wheat (Triticum aestivum L.). Development of resistant wheat cultivars has been a challenge since no resistant wheat accession is available. GmPGIP3, one member of polygalacturonase-inhibiting protein (PGIP) family in soybean (Glycine max), exhibited inhibition activity against fungal endopolygalacturonases (PGs) in vitro. In this study, the GmPGIP3 transgenic wheat plants were generated and used to assess the effectiveness of GmPGIP3 in protecting wheat from the infection of Ggt and B. sorokiniana. Four independent transgenic lines were identified by genomic PCR, Southern blot, and reverse transcription PCR (RT-PCR). The introduced GmPGIP3 was integrated into the genomes of these transgenic lines and could be expressed. The expressing GmPGIP3 protein in these transgenic wheat lines could inhibit the PGs produced by Ggt and B. sorokiniana. The disease response assessments postinoculation showed that the GmPGIP3-expressing transgenic wheat lines displayed significantly enhanced resistance to both take-all and common root rot diseases caused by the infection of Ggt and B. sorokiniana. These data suggested that GmPGIP3 is an attractive gene resource in improving resistance to both take-all and common root rot diseases in wheat.

Management Strategies for Annosus Root Disease in Pacific Northwest Coastal Western Hemlock

Science.gov (United States)

Kenelm W. Russell

1989-01-01

Actual loss from annosus root disease infections in hemlock stands is difficult to determine. As political trends move toward protecting old-growth timber, greater market demand will be placed on second growth western hemlock. These stands must be kept healthy for maximum productivity. The paper compares the following 70-year rotation timber management scenarios: The...

Ground-dwelling arthropod association with coarse woody debris following long-term dormant season prescribed burning in the longleaf pine flatwoods of north Florida.

Science.gov (United States)

J.L. Hanula; D.D. Wade; J. O' Brien; S.C. Loeb

2009-01-01

A 5·year study of long· term (40 years) study plots was conducted on the Osceola National·Forest in northern Florida to determine how dormant-season fire frequency (annual, biennial,quadrennial, or unburned) affects ground-dwelling macroarthropod use of coarsewoody debris in longleaf pine (Pinus...

Impact of Hurricane Ivan on the regional longleaf pine growth study: is there a relation to site or stand conditions?

Science.gov (United States)

John S. Kush; John C. Gilbert

2010-01-01

The US Forest Service Regional Longleaf Pine Growth Study (RLGS) began its eighth re-measurement (40th year) during 2004 autumn. The study has 305 plots of which 171 plots are located on the Escambia Experimental Forest (EEF) in Brewton AL. EEF is operated by the U.S. Forest Service in cooperation with the T.R. Miller Mill Company. The RLGS has plots distributed across...

The Use of Antioxidants to Control Root Rot and Wilt Diseases of Pepper

Directory of Open Access Journals (Sweden)

Montaser Fawzy ABDEL-MONAIM

2010-06-01

Full Text Available Ten isolates of Fusarium spp were isolated from pepper plants collected from different locations in New Valley Governorate, Egypt. Fusarium solani isolate FP2 and F. oxysporum isolate FP4 were highly pathogenic isolates but the other isolates moderate or less pathogenic to pepper plants (cv. Anaheim-M. The four antioxidant compounds (coumaric acid, citric acid, propylgalate and salicylic acid each at 100 and 200 ppm were evaluated for their in vitro and in vivo agonist to Fusarium pathogenic isolates caused root rot and wilt diseases in pepper plants. All tested antioxidant compounds reduced damping-off, root rot/wilt and area under root rot/wilt progress curve when used as seed soaking, seedling soaking, and soil drench especially at 200 ppm under greenhouse and field conditions compared with untreated plants. All chemicals increased fresh and dry weight of seedling grown in soil drenching or seed treatment with any antioxidants. At the same time, all tested chemicals significantly increase plant growth parameters i.e plant length, plant branching, and total yield per plant in case of seedling soaking or soil drench. In general, propylgalate at 200 ppm was more efficient in reducing infection with damping-off, root rot and wilt diseases as well as increasing the seedling fresh weight, dry weight, plant length, plant branching, number of pod plant-1 and pod yield plant-1. On the other hand, all tested antioxidants had less or no effect on mycelial dry weight and mycelial leaner growth. On the contrary, all chemicals much reduced spore formation in both Fusarium species at 100 or 200 ppm and the inhibitory effect of antioxidants increased with increasing their concentrations.

Effects of combining CBCT technology with visual root canal recurrence in treatment of elderly patients with dental pulp disease.

Science.gov (United States)

Cui, J-J; Peng, B; Lin, W

2017-03-01

The aim of this study is to analyze the effects of combining cone beam computed tomography (CBCT) technology with visual root canal recurrence in the treatment of elderly patients with dental pulp disease. 56 cases of elderly patients with dental pulp disease were contiguously selected, and randomly divided into the control group (70 teeth from 27 patients) and the observation group (77 teeth from the rest 29 patients). We adopted CBCT technology combined with conventional root canal therapy in control group and CBCT technology combined with visual root canal recurrence in observation group to compare the clinical effects. It was found that there was no statistical difference in duration of operation between the two groups (p>0.05). The operation times and the VAS during and after operation of the observation group were significantly less than that of the control group (ppulp disease.

Integrated Management of Damping-off, Root and/or Stem Rot Diseases of Chickpea and Efficacy of the Suggested Formula

Directory of Open Access Journals (Sweden)

Montaser Fawzy ABDEL-MONAIM

2011-08-01

Full Text Available Eleven fungal isolates were isolated from naturally infected chickpea roots collected from different locations in New Valley Governorate (Egypt. The isolated fungi were purified and identified as Rhizoctonia solani (5 isolates, Fusarium solani (4 isolates and Sclerotinia sclerotiorum (2 isolates. The isolated fungi proved their pathogenicity on cv. Giza 3. Response of chickpea cvs. Giza 1, Giza 2, Giza 3, Giza 4, Giza 88, Giza 195, Giza 531 to infection by the tested fungi was significantly varied. Giza 1 was the most resistant one followed by Giza 531, while the other tested cvs. were highly susceptible. Seven biocontrol agents, namely Bacillus subtilis, B. megaterium, B. cereus, Trichoderma viride, T. harzianum, Aspergillus sp., Penicillium sp. isolated from chickpea rhizosphere, were tested for their antagonistic action against the tested pathogens. B. subtilis isolate BSM1, B. megaterium isolate TVM5, T. viride isolate TVM2 and T. harzianum isolate THM4 were the most antagonistic ones to the tested fungi in vitro, while the other isolates were moderate or weak antagonists. The most antagonistic isolates as well as the commercial biocide Rhizo-N were applied as seed treatment for controlling damping-off, root and/or stem rot diseases caused by the tested fungi under greenhouse conditions. The obtained data showed that all tested antagonistic isolates were able to cause significant reduction of damping-off, root and/or stem rot diseases in chickpea plants. T. viride (isolate TVM2 and B. megaterium (isolate BMM5 proved to be the most effective isolates for controlling the diseases. Under field condition, the obtained data indicated that all the tested antagonistic isolates significantly reduced damping-off, root and/or stem rot. T. viride (isolate TVM2 and B. megaterium (isolate BMM5 recorded the highest reduction of damping-off, root and/or stem rot in all sowing dates. Sowing of treated seeds with bioagents in first of November gave the

Fusarium oxysporum protects Douglas-fir (Pseudotsuga menziesii) seedlings from root disease caused by Fusarium commune

Science.gov (United States)

R. Kasten Dumroese; Mee-Sook Kim; Robert L. James

2012-01-01

Fusarium root disease can be a serious problem in forest and conservation nurseries in the western United States. Fusarium inoculum is commonly found in most container and bareroot nurseries on healthy and diseased seedlings, in nursery soils, and on conifer seeds. Fusarium spp. within the F. oxysporum species complex have been recognized as pathogens for more than a...

A Mid-IR Multivariate Analysis Study on the Gross Calorific Value in Longleaf Pine: Impact on Correlations with Lignin and Extractive Contents

Science.gov (United States)

Chi-Leung So; Thomas L. Eberhardt

2013-01-01

Twenty 70-year-old longleaf pine trees from a spacing, thinning, and pruning study were harvested, from which samples were analyzed for gross calorific value (GCV). A strong correlation was found between GCV and extractive contents for the unextracted wood samples. Although lignin content should impact GCV, no correlation was found between the variation in GCV with...

Study the Reaction of Some Barley Cultivars to Rhizoctonia solani AG-8, the Causal Agent of Root Rot Disease

Directory of Open Access Journals (Sweden)

M. Yazdani Kohanstani

2016-03-01

Full Text Available Introduction: Barley is one of the important agricultural products, mostly as livestock feed, and secondly for its important role in human nutrition as bread, soups, baby food and etc. It has the second-largest rank of cultivation area and yield of the national grain production and the Isfahan province, with production 5% of total barley yield, has been ranked eighth in 2010. Because its consumption exceed over the production, barley is one of the major imports to the country. In addition to, agronomy operations, plant diseases are important factors in yield loss. Rhizoctonia root rot (caused by soil-inhabiting fungus Rhizoctonia solani is one of the important diseases of cereals include barley over the worldwide cultivation area. Apropriate soil fertility, delaying planting dates, crop rotation with insensitive crops such as legumes, planting resistant varieties and fungicide seed dressing are recommended methods to reduce disease damage. Chemical control of this disease is difficult because of its soil-born the pathogen. Therefore, reducing disease level requires application of other methods especially resistance cultivars. Materials and Methods In this research, the reaction of 8 barley cultivars were examined against root rot disease in greenhouse conditions, in the winter of 2009. Fifteen isolates of the fungus were isolated from infected barley fields in the Isfahan province and their pathogenicity was examined on barley. One isolate with the highest pathogenicity potential was selected and special tests showed that the isolate was Rhizoctonia solani AG-8. The experiment was conducted in a completely randomized design with 4 replications. The test plants were harvested at two times of 4 & 8 weeks after planting. Following parameters were measured: 1- dry weight of plant root and aerial part, 2- disease severity as an index of subcrown internodes infection. Results and discussion Statistical analysis of recorded data showed that there were

Ground-dwelling arthropod association with coarse woody debris following long-term dormant season prescribed burning in the longleaf pine flatwoods of North Carolina

Science.gov (United States)

James L Hanula; Dale Wade; Joseph O' Brien; Susan Loeb

2009-01-01

A 5-year study of long-term (40 years) study plots was conducted on the Osceola National Forest in northern Florida to determine how dormant-season fire frequency (annual, biennial, quadrennial, or unburned) affects ground-dwelling macroarthropod use of coarse woody debris in longleaf pine (Pinus palustris Mill.) forests. Pitfall traps were used to sample arthropods...

Quantifying the Severity of Phytophthora Root Rot Disease in Avocado Trees Using Image Analysis

Directory of Open Access Journals (Sweden)

Arachchige Surantha Ashan Salgadoe

2018-02-01

Full Text Available Phytophthora root rot (PRR infects the roots of avocado trees, resulting in reduced uptake of water and nutrients, canopy decline, defoliation, and, eventually, tree mortality. Typically, the severity of PRR disease (proportion of canopy decline is assessed by visually comparing the canopy health of infected trees to a standardised set of photographs and a corresponding disease rating. Although this visual method provides some indication of the spatial variability of PRR disease across orchards, the accuracy and repeatability of the ranking is influenced by the experience of the assessor, the visibility of tree canopies, and the timing of the assessment. This study evaluates two image analysis methods that may serve as surrogates to the visual assessment of canopy decline in large avocado orchards. A smartphone camera was used to collect red, green, and blue (RGB colour images of individual trees with varying degrees of canopy decline, with the digital photographs then analysed to derive a canopy porosity percentage using a combination of ‘Canny edge detection’ and ‘Otsu’s’ methods. Coinciding with the on-ground measure of canopy porosity, the canopy reflectance characteristics of the sampled trees measured by high resolution Worldview-3 (WV-3 satellite imagery was also correlated against the observed disease severity rankings. Canopy porosity values (ranging from 20–70% derived from RGB images were found to be significantly different for most disease rankings (p < 0.05 and correlated well (R2 = 0.89 with the differentiation of three disease severity levels identified to be optimal. From the WV-3 imagery, a multivariate stepwise regression of 18 structural and pigment-based vegetation indices found the simplified ratio vegetation index (SRVI to be strongly correlated (R2 = 0.96 with the disease rankings of PRR disease severity, with the differentiation of four levels of severity found to be optimal.

Diagnosis of Annosus Root Disease in Mixed Conifer Forests in the Northwestern United States

Science.gov (United States)

Craig L. Schmitt

1989-01-01

Recognizing annosus root disease affecting conifers in northwestern United States forests is discussed. Field diagnosis can bemade by observing characteristic stand patterns, wood stain and decay, ectotrophic mycelium, and sporophores. Most seriously affected trees include hemlocks, grand fir, white fir and Pacific silver fir. Ponderosa pine and other true firs may...

Root diseases in coniferous forests of the Inland West: potential implications of fuels treatments

Science.gov (United States)

Raini C. Rippy; Jane E. Stewart; Paul J. Zambino; Ned B. Klopfenstein; Joanne M. Tirocke; Mee-Sook Kim; Walter G. Thies

2005-01-01

After nearly 100 years of fire exclusion, introduced pests, and selective harvesting, a change in forest composition has occurred in many Inland West forests of North America. This change in forest structure has frequently been accompanied by increases in root diseases and/or an unprecedented buildup of fuels. Consequently, many forest managers are implementing plans...

Effect of phosphate and the arbuscular mycorrhizal fungus Glomus intraradices on disease severity of root rot of peas ( Pisum sativum ) caused by Aphanomyces euteiches

DEFF Research Database (Denmark)

Bødker, Lars; Kjøller, Rasmus; Rosendahl, Søren

1998-01-01

The effects of inorganic phosphate levels and the presence of arbuscular mycorrhiza on disease severity of Aphanomyces euteiches in pea roots were studied. Disease severity on roots and epicotyl as well as the oospore number within infected root tissue were correlated with the phosphorus (P) level...... to measure the activity of the pathogen in roots. The enzyme activity increased with disease severity and disease incidence, except in plants supplemented with P at the highest level, where a peak in activity was seen 12 days after inoculation with the pathogen, followed by a decrease in activity...

Surgical management of aortic root disease in Marfan syndrome and other congenital disorders associated with aortic root aneurysms

NARCIS (Netherlands)

T. Treasure (Tom); J.J.M. Takkenberg (Hanneke); J. Pepper (John)

2014-01-01

textabstractElective root replacement in Marfan syndrome has improved life expectancy in affected patients. Three forms of surgery are now available: total root replacement (TRR) with a valved conduit, valve sparing root replacement (VSRR) and personalised external aortic root support (PEARS) with a

Surgical management of aortic root disease in Marfan syndrome and other congenital disorders associated with aortic root aneurysms

NARCIS (Netherlands)

T. Treasure (Tom); J.J.M. Takkenberg (Hanneke); J. Pepper (John)

2016-01-01

textabstractElective root replacement in Marfan syndrome has improved life expectancy in affected patients. Three forms of surgery are now available: total root replacement (TRR) with a valved conduit, valve sparing root replacement (VSRR) and personalised external aortic root support (PEARS) with a

Antiviral effect of Anthocleista nobilis root extract on the liver homogenate indices of poultry fowls infected with Newcastle Disease Virus (NDV)

OpenAIRE

Ayodele P. O,; Okonko I. O,; Chukwuka K. S,; Odu N. N; Michael V. I

2011-01-01

This study reports the preliminary investigation of the antiviral effect of Anthocleista nobilis root extract on the liver homogenate indices of poultry fowls treated for Newcastle Disease (ND). Eighteen (18) weeks-old fowls were used for this study. These were divided into 3 groups, A (infected and with treatment), B (infected and without treatment) and C (control). Groups A and B were challenged with Newcastle disease virus (NDV). Group A and C were given ethanolic root extract of A. nobili...

Comparison of Red-Cockaded Woodpecker (Piciodes borealis) Nestling Diet in Old-Growth and Old-Field Longleaf Pine (Pinus palustris)

Energy Technology Data Exchange (ETDEWEB)

Hanula, J.L.; Engstrom, R.T.

1999-10-01

Automatic cameras were used to record adult woodpecker diets in old-growth and old-field longleaf pine in the South. Roaches were the number one prey for the woodpeckers based on either biomass or numbers. The latter ranged from 37% to 57% of the prey numbers and 55%-73% of the biomass. Morisita's index of similarity between old-field and old growth varied from 0.89 to 0.95. The authors conclude that the prey base is similar in both conditions and that old-growth provides similar foraging habitat.

Transcriptomic analysis of molecular responses in Malus domestica 'M26' roots affected by apple replant disease.

Science.gov (United States)

Weiß, Stefan; Bartsch, Melanie; Winkelmann, Traud

2017-06-01

Gene expression studies in roots of apple replant disease affected plants suggested defense reactions towards biotic stress to occur which did not lead to adequate responses to the biotic stressors. Apple replant disease (ARD) leads to growth inhibition and fruit yield reduction in replanted populations and results in economic losses for tree nurseries and fruit producers. The etiology is not well understood on a molecular level and causal agents show a great diversity indicating that no definitive cause, which applies to the majority of cases, has been found out yet. Hence, it is pivotal to gain a better understanding of the molecular and physiological reactions of the plant when affected by ARD and later to overcome the disease, for example by developing tolerant rootstocks. For the first time, gene expression was investigated in roots of ARD affected plants employing massive analysis of cDNA ends (MACE) and RT-qPCR. In reaction to ARD, genes in secondary metabolite production as well as plant defense, regulatory and signaling genes were upregulated whereas for several genes involved in primary metabolism lower expression was detected. For internal verification of MACE data, candidate genes were tested via RT-qPCR and a strong positive correlation between both datasets was observed. Comparison of apple 'M26' roots cultivated in ARD soil or γ-irradiated ARD soil suggests that typical defense reactions towards biotic stress take place in ARD affected plants but they did not allow responding to the biotic stressors attack adequately, leading to the observed growth depressions in ARD variants.

Occurrence of Root Rot and Vascular Wilt Diseases in Roselle (Hibiscus sabdariffa L.) in Upper Egypt

OpenAIRE

Hassan, Naglaa; Shimizu, Masafumi; Hyakumachi, Mitsuro

2014-01-01

Roselle (Hibiscus sabdariffa L.) family Malvaceae is an important crop used in food, cosmetics and pharmaceutics industries. Roselle is cultivated mainly in Upper Egypt (Qena and Aswan governorates) producing 94% of total production. Root rot disease of roselle is one of the most important diseases that attack both seedlings and adult plants causing serious losses in crop productivity and quality. The main objective of the present study is to identify and characterize pathogens associated wit...

Anti-Alzheimer's disease activity of compounds from the root bark of Morus alba L.

Science.gov (United States)

Kuk, Eun Bi; Jo, A Ra; Oh, Seo In; Sohn, Hee Sook; Seong, Su Hui; Roy, Anupom; Choi, Jae Sue; Jung, Hyun Ah

2017-03-01

The inhibition of acetylcholinesterase (AChE), butyrylcholinesterase (BChE), and β-site amyloid precursor protein cleaving enzyme 1 (BACE1) plays important roles in prevention and treatment of Alzheimer's disease (AD). Among the individual parts of Morus alba L. including root bark, branches, leaves, and fruits, the root bark showed the most potent enzyme inhibitory activities. Therefore, the aim of this study was to evaluate the anti-AD activity of the M. alba root bark and its isolate compounds, including mulberrofuran G (1), albanol B (2), and kuwanon G (3) via inhibition of AChE, BChE, and BACE1. Compounds 1 and 2 showed strong AChE- and BChE-inhibitory activities; 1-3 showed significant BACE1 inhibitory activity. Based on the kinetic study with AChE and BChE, 2 and 3 showed noncompetitive-type inhibition; 1 showed mixed-type inhibition. Moreover, 1-3 showed mixed-type inhibition against BACE1. The molecular docking simulations of 1-3 demonstrated negative binding energies, indicating a high affinity to AChE and BACE1. The hydroxyl group of 1-3 formed hydrogen bond with the amino acid residues located at AChE and BACE1. Consequently, these results indicate that the root bark of M. alba and its active compounds might be promising candidates for preventive and therapeutic agents for AD.

Response of the Andean diversity panel to root rot in a root rot nursery in Puerto Rico

Science.gov (United States)

The Andean Diversity Panel (ADP) was evaluated under low-fertility and root rot conditions in two trials conducted in 2013 and 2015 in Isabela, Puerto Rico. About 246 ADP lines were evaluated in the root rot nursery with root rot and stem diseases caused predominantly by Fusarium solani, which cause...

Pathological and rhizospherical studies on root-rot disease of ...

African Journals Online (AJOL)

AJB SERVER

2007-02-05

Feb 5, 2007 ... Rhizoctonia solani root-rot aggressive pathogens to squash on media containing culture of Trichoderma ..... The bacteriology of root region of cat ... (2004): Comparison of the behavior of a transformed hygromycin resistant ...

The evaluation of winter wheat roots and leaf sheath diseases diagnostic methods

Directory of Open Access Journals (Sweden)

Ewa Solarska

2012-12-01

Full Text Available The maltose and mineral media for isolation of Gaeumannomyces graminis from roots were assessed. The differences in numbers of obtained isolates were found depending on the medium used and sampling date. Easier identification of pathogen was possible employing maltose medium. The fungi from genus Fusarium occurring on winter wheat leaf sheaths were identified by mycological analysis and PCR, while the fungus Pseudocercosporella herpotrichoides was detected by PCR and ELISA methods. PCR and ELISA methods enabled to detect pathogens also in periods before the disease symptoms on plants occurred.

Influence of herbicides and felling, fertilization, and prescribed fire on longleaf pine growth and understory vegetation through ten growing seasons and the outcome of an ensuing wildfire

Science.gov (United States)

James D. Haywood

2011-01-01

Restoring longleaf pine (Pinus palustris Mill.) over much of its original range requires artificial regeneration. In central Louisiana, USA, two fertilization levels - No (NF) or Yes (F-36 kg/ha N and 40 kg/ha P) in combination with three vegetation treatments - Check, four prescribed fires (PF), or multi-year vegetation control by herbicidal and mechanical means (IVM...

External root resorption: Different etiologies explained from the composition of the human root-close periodontal membrane

Directory of Open Access Journals (Sweden)

Inger Kjaer

2013-01-01

Full Text Available Introduction: This paper summarizes different conditions, which have a well-known influence on the resorption of tooth roots. It also highlights factors important for individual susceptibility to root resorption. Furthermore, the paper focuses on idiopathic root resorption where the provoking factor is not known. The Hypothesis: The several different disturbances causing root resorption can be either orthodontically provoked or acquired by trauma, virus or congenital diseases. It is presumed that all these conditions lead to inflammatory processes in the three main tissue layers, comprising the peri-root sheet. Evaluation of the Hypothesis: This paper explains how different etiologies behind root resorption and how different phenotypic traits in root resorption can be understood from immunohistochemical studies of the human periodontal membrane close to the root and thus, gain a new understanding of the phenomenon of root resorption.

A Root water uptake model to compensate disease stress in citrus trees

Science.gov (United States)

Peddinti, S. R.; Kambhammettu, B. P.; Lad, R. S.; Suradhaniwar, S.

2017-12-01

Plant root water uptake (RWU) controls a number of hydrologic fluxes in simulating unsaturated flow and transport processes. Variable saturated models that simulate soil-water-plant interactions within the rizhosphere do not account for the health of the tree. This makes them difficult to analyse RWU patterns for diseased trees. Improper irrigation management activities on diseased (Phytopthora spp. affected) citrus trees of central India has resulted in a significant reduction in crop yield accompanied by disease escalation. This research aims at developing a quantitative RWU model that accounts for the reduction in water stress as a function of plant disease level (hereafter called as disease stress). A total of four research plots with varying disease severity were considered for our field experimentation. A three-dimensional electrical resistivity tomography (ERT) was performed to understand spatio-temporal distribution in soil moisture following irrigation. Evaporation and transpiration were monitored daily using micro lysimeter and sap flow meters respectively. Disease intensity was quantified (on 0 to 9 scale) using pathological analysis on soil samples. Pedo-physocal and pedo-electric relations were established under controlled laboratory conditions. A non-linear disease stress response function for citrus trees was derived considering phonological, hydrological, and pathological parameters. Results of numerical simulations conclude that the propagation of error in RWU estimates by ignoring the health condition of the tree is significant. The developed disease stress function was then validated in the presence of deficit water and nutrient stress conditions. Results of numerical analysis showed a good agreement with experimental data, corroborating the need for alternate management practices for disease citrus trees.

Search for microorganisms which can disrupt communication between plant pathogenic bacteria causing hairy roots disease in greenhouse vegetables

NARCIS (Netherlands)

Streminska, M.A.; Stijger, I.

2016-01-01

Hairy roots disease is an important problem in cultivation of greenhouse vegetables (tomato, aubergine and cucumber). Infection is caused by rhizogenic bacteria from Agrobacterium/Rhizobium group. It has been shown that infection process is regulated by environmental factors and quorum sensing

Sustainable management of root-knot disease of tomato by neem cake and Glomus fasciculatum

Directory of Open Access Journals (Sweden)

Rose Rizvi

2015-12-01

Full Text Available A pot experiment was conducted during winter season of 2009–2010 in the department of Botany, AMU, Aligarh, India, to determine the nematicidal potential of organic matter, neem cake at third level of dose, and bioagent, Glomus fasciculatum in terms of various growth parameters of tomato, when inoculated individually as well as concomitantly with respect to root-knot development. Neem cake and G. fasciculatum showed potential for sustainable management while providing nutrient sources for proper plant growth. Disease intensity of root-knot nematode decreased while increasing the doses of neem cake along with the G. fasciculatum. Chlorophyll contents have been found to be increased in single and combined application as well. There is a progressive increase in growth parameters raised in soil amended with 10, 20, and 30 g neem cake/kg soil and inoculated with G. fasciculatum. Significant improvement in the plant growth was observed when G. fasciculatum and neem cake were inoculated simultaneously. Neem cake plus G. fasciculatum reduced the nematodes’ multiplication and root-galling, and increased the plant growth of tomato as compared to unamended and Meloidogyne incognita-inoculated plants. Mycorrhyzation and agronomic parameters were increased due to application of G. fasciculatum alone, but enhanced further when inoculated with neem cake.

Resistance to Fusarium dry root rot disease in cassava accessions

Directory of Open Access Journals (Sweden)

Saulo Alves Santos de Oliveira

2013-10-01

Full Text Available The objective of this work was to identify sources of resistance to dry root rot induced by Fusarium sp. in cassava accessions. A macroconidial suspension (20 µL of 11 Fusarium sp. isolates was inoculated in cassava roots, from 353 acessions plus seven commercial varieties. Ten days after inoculation, the total area colonized by the pathogen on the root pulp was evaluated by digital image analysis. Cluster analysis revealed the presence of five groups regarding resistance. The root lesion areas ranged from 18.28 to 1,096.07 mm² for the accessions BGM 1518 and BGM 556, respectively. The genotypes BGM 1042, BGM 1552, BGM 1586, BGM 1598, and BGM 1692 present the best agronomical traits.

Role of mungbean root nodule associated fluorescent Pseudomonas and rhizobia in suppressing the root rotting fungi and root knot nematodes in chickpea (Cicer arietinum L.)

International Nuclear Information System (INIS)

Noreen, R.; Shafique, A.; Haque, S.E.; Ali, S.A.

2016-01-01

Three isolates each of fluorescent Pseudomonas (NAFP-19, NAFP-31 and NAFP-32) and rhizobia (NFB- 103, NFB-107 and NFB-109) which were originally isolated from root nodules of mungbean (Vigna radiata) showed significant biocontrol activity in the screen house and under field condition, against root rotting fungi viz., Macrophomina phaseolina, Fusarium solani, F. oxysporum and Rhizoctonia solani evaluated on chickpea. Biocontrol potential of these isolates was also evaluated against Meloidogyne incognita, the root knot nematode. Application of Pseudomonas and rhizobial isolates as a soil drench, separately or mixed significantly reduced root rot disease under screen house and field conditions. Nematode penetration in roots was also found significantly less in rhizobia or Pseudomonas treatments used separately or mixed as compared to control. Fluorescent Pseudomonas treated plants produced greater number of nodules per plant than control plants and about equal to rhizobia treated plants, indicating that root nodule associated fluorescent Pseudomonas enhance root nodulation. (author)

Within tree variation of lignin, extractives, and microfibril angle coupled with the theoretical and near infrared modeling of microfibril angle

Science.gov (United States)

Brian K. Via; chi L. So; Leslie H. Groom; Todd F. Shupe; michael Stine; Jan. Wikaira

2007-01-01

A theoretical model was built predicting the relationship between microfibril angle and lignin content at the Angstrom (A) level. Both theoretical and statistical examination of experimental data supports a square root transformation of lignin to predict microfibril angle. The experimental material used came from 10 longleaf pine (Pinus palustris)...

Surgical management of aortic root disease in Marfan syndrome and other congenital disorders associated with aortic root aneurysms.

Science.gov (United States)

Treasure, Tom; Takkenberg, J J M; Pepper, John

2014-10-01

Elective root replacement in Marfan syndrome has improved life expectancy in affected patients. Three forms of surgery are now available: total root replacement (TRR) with a valved conduit, valve sparing root replacement (VSRR) and personalised external aortic root support (PEARS) with a macroporous mesh sleeve. TRR can be performed irrespective of aortic dimensions and a mechanical replacement valve is a secure and near certain means of correcting aortic valve regurgitation but has thromboembolic and bleeding risks. VSRR offers freedom from anticoagulation and attendant risks of bleeding but reoperation for aortic regurgitation runs at 1.3% per annum. A prospective multi-institutional study has found this to be an underestimate of the true rate of valve-related adverse events. PEARS conserves the aortic root anatomy and optimises the chance of maintaining valve function but average follow-up is under 5 years and so the long-term results are yet to be determined. Patients are on average in their 30s and so the cumulative lifetime need for reoperation, and of any valve-related complications, are consequently substantial. With lowering surgical risk of prophylactic root replacement, the threshold for intervention has reduced progressively over 30 years to 4.5 cm and so an increasing number of patients who are not destined to have a dissection are now having root replacement. In evaluation of these three forms of surgery, the number needed to treat to prevent dissection and the balance of net benefit and harm in future patients must be considered.

PM2.5 and Carbon Emissions from Prescribed Fire in a Longleaf Pine Ecosystem

Science.gov (United States)

Strenfel, S. J.; Clements, C. B.; Hiers, J. K.; Kiefer, C. M.

2008-12-01

Prescribed fires are a frequently utilized land-management tool in the Southeastern US. In order to better characterize emissions and impacts from prescribed fire in longleaf pine ecosystems, in situ data were obtained within the burn perimeter using a 10-m instrumented flux tower. Turbulence and temperature data at 10-m were sampled at 10 Hz using a sonic anemometer and fine-wire thermocouples respectively. Measurements of PM2.5, CO and CO2 emissions were sampled at 10-m within the burn perimeter and PM2.5 and Black Carbon PM2.5 were sampled 0.5 km downwind of the fire front using a 2-m instrumented tripod. Preliminary results indicate PM2.5 and carbon emissions significantly increased during the fire-front passage, and downwind PM concentrations were amplified beyond pre-fire ambient concentrations. In addition, the considerable amount a heat release and flux data gathered from these prescribed fires suggests that near surface atmospheric conditions were directly impacted by increased turbulence generation.

Root rot in sugar beet piles at harvest

Science.gov (United States)

Sugar beet root rots are not only a concern because of reduced yields, but can also be associated with losses in storage. Our primary sugar beet root rot disease problem in the Amalgamated production area is Rhizoctonia root rot. However, this rot frequently only penetrates a short distance past t...

Evaluation of root-knot nematode disease control and plant growth promotion potential of biofertilizer Ning shield on Trichosanthes kirilowii in the field.

Science.gov (United States)

Jiang, Chun-Hao; Xie, Ping; Li, Ke; Xie, Yue-Sheng; Chen, Liu-Jun; Wang, Jin-Suo; Xu, Quan; Guo, Jian-Hua

Biofertilizer Ning shield was composed of different strains of plant growth promotion bacteria. In this study, the plant growth promotion and root-knot nematode disease control potential on Trichosanthes kirilowii in the field were evaluated. The application of Ning shield significantly reduced the diseases severity caused by Meloidogyne incognita, the biocontrol efficacy could reached up to 51.08%. Ning shield could also promote the growth of T. kirilowii in the field by increasing seedling emergence, height and the root weight. The results showed that the Ning shield could enhance the production yield up to 36.26%. Ning shield could also promote the plant growth by increasing the contents of available nitrogen, phosphorus, potassium and organic matter, and increasing the contents of leaf chlorophyll and carotenoid pigment. Moreover, Ning shield could efficiently enhance the medicinal compositions of Trichosanthes, referring to the polysaccharides and trichosanthin. Therefore, Ning shield is a promising biofertilizer, which can offer beneficial effects to T. kirilowii growers, including the plant growth promotion, the biological control of root-knot disease and enhancement of the yield and the medicinal quality. Copyright © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.

Cyclic occurrence of fire and its role in carbon dynamics along an edaphic moisture gradient in longleaf pine ecosystems.

Directory of Open Access Journals (Sweden)

Andrew Whelan

Full Text Available Fire regulates the structure and function of savanna ecosystems, yet we lack understanding of how cyclic fire affects savanna carbon dynamics. Furthermore, it is largely unknown how predicted changes in climate may impact the interaction between fire and carbon cycling in these ecosystems. This study utilizes a novel combination of prescribed fire, eddy covariance (EC and statistical techniques to investigate carbon dynamics in frequently burned longleaf pine savannas along a gradient of soil moisture availability (mesic, intermediate and xeric. This research approach allowed us to investigate the complex interactions between carbon exchange and cyclic fire along the ecological amplitude of longleaf pine. Over three years of EC measurement of net ecosystem exchange (NEE show that the mesic site was a net carbon sink (NEE = -2.48 tonnes C ha(-1, while intermediate and xeric sites were net carbon sources (NEE = 1.57 and 1.46 tonnes C ha(-1, respectively, but when carbon losses due to fuel consumption were taken into account, all three sites were carbon sources (10.78, 7.95 and 9.69 tonnes C ha(-1 at the mesic, intermediate and xeric sites, respectively. Nonetheless, rates of NEE returned to pre-fire levels 1-2 months following fire. Consumption of leaf area by prescribed fire was associated with reduction in NEE post-fire, and the system quickly recovered its carbon uptake capacity 30-60 days post fire. While losses due to fire affected carbon balances on short time scales (instantaneous to a few months, drought conditions over the final two years of the study were a more important driver of net carbon loss on yearly to multi-year time scales. However, longer-term observations over greater environmental variability and additional fire cycles would help to more precisely examine interactions between fire and climate and make future predictions about carbon dynamics in these systems.

Improvement of resistance to Fusarium root rot through gene ...

African Journals Online (AJOL)

Fusarium root rot (FRR), caused by Fusarium solani f.sp. , is one of the most serious root rot diseases of common bean (Phaseolus vulgaris L.) throughout the world. Yield losses of up to 84% have been attributed to the disease. Development and deployment of resistant materials is the most feasible approach to managing ...

Fabry's disease: biochemical and histochemical studies on hair roots for carrier detection.

Science.gov (United States)

Vermorken, A J; Weterings, P J; Spierenburg, G T; vanBennekom, C A; Wirtz, P; deBruyn, C H; Oei, T L

1978-02-01

A method of assay alpha-galactosidase and acid phosphatase activities in single hair roots is described. Enzyme histochemical studies show that the distribution of acid phosphatase in the human hair root matches that of alpha-galactosidase. Histochemically, the main activity is located in the upper part of the sheath near the orifice of the duct of the sebaceous gland. This is confirmed by enzyme assays on different parts of the hair root after dissection. The variation in the values found in individual hair roots is improved by relating alpha-galactosidase to acid phosphatase activities. Storage experiments indicate a remarkable stability of both alpha-galactosidase and acid phosphatase in human hair roots.

Rhizoctonia crown and root rot disease nursery

Science.gov (United States)

The BSDF cooperative CRR Eastern Evaluation Nursery Rhizoctonia crown and root rot Evaluation Nursery in 2016 was a randomized complete-block design with five replications in 15 feet long, one-row plots (20 in row spacing), at the Saginaw Valley Research and Education Center near Frankenmuth, MI. F...

Incidence and phylogenetic analyses of Armillaria spp. associated with root disease in peach orchards in the State of Mexico, Mexico

Science.gov (United States)

R. D. Elias-Roman; R. A. Guzman-Plazola; N. B. Klopfenstein; D. Alvarado-Rosales; G. Calderon-Zavala; J. A. Mora-Aguilera; M.-S. Kim; R. Garcia-Espinosa

2013-01-01

Incidence of peach [Prunus persica (L.) Batsch] tree mortality attributed to Armillaria root disease was assessed from 2009 to 2011 in 15 orchards in the State of Mexico, Mexico. Incidence increased gradually every year of assessment, reaching average values of 9.7, 15.3 and 20.3% tree mortality and 23.2, 24.7 and 28.3% disease-impacted area of the orchards during 2009...

Curcumin: getting back to the roots.

Science.gov (United States)

Shishodia, Shishir; Sethi, Gautam; Aggarwal, Bharat B

2005-11-01

The use of turmeric, derived from the root of the plant Curcuma longa, for treatment of different inflammatory diseases has been described in Ayurveda and in traditional Chinese medicine for thousands of years. The active component of turmeric responsible for this activity, curcumin, was identified almost two centuries ago. Modern science has revealed that curcumin mediates its effects by modulation of several important molecular targets, including transcription factors (e.g., NF-kappaB, AP-1, Egr-1, beta-catenin, and PPAR-gamma), enzymes (e.g., COX2, 5-LOX, iNOS, and hemeoxygenase-1), cell cycle proteins (e.g., cyclin D1 and p21), cytokines (e.g., TNF, IL-1, IL-6, and chemokines), receptors (e.g., EGFR and HER2), and cell surface adhesion molecules. Because it can modulate the expression of these targets, curcumin is now being used to treat cancer, arthritis, diabetes, Crohn's disease, cardiovascular diseases, osteoporosis, Alzheimer's disease, psoriasis, and other pathologies. Interestingly, 6-gingerol, a natural analog of curcumin derived from the root of ginger (Zingiber officinalis), exhibits a biologic activity profile similar to that of curcumin. The efficacy, pharmacologic safety, and cost effectiveness of curcuminoids prompt us to "get back to our roots."

Root exudates from grafted-root watermelon showed a certain contribution in inhibiting Fusarium oxysporum f. sp. niveum.

Directory of Open Access Journals (Sweden)

Ning Ling

Full Text Available Grafting watermelon onto bottle gourd rootstock is commonly used method to generate resistance to Fusarium oxysporum f. sp. niveum (FON, but knowledge of the effect of the root exudates of grafted watermelon on this soil-borne pathogen in rhizosphere remains limited. To investigate the root exudate profiles of the own-root bottle gourd, grafted-root watermelon and own-root watermelon, recirculating hydroponic culture system was developed to continuously trap these root exudates. Both conidial germination and growth of FON were significantly decreased in the presence of root exudates from the grafted-root watermelon compared with the own-root watermelon. HPLC analysis revealed that the composition of the root exudates released by the grafted-root watermelon differed not only from the own-root watermelon but also from the bottle gourd rootstock plants. We identified salicylic acid in all 3 root exudates, chlorogenic acid and caffeic acid in root exudates from own-root bottle gourd and grafted-root watermelon but not own-root watermelon, and abundant cinnamic acid only in own-root watermelon root exudates. The chlorogenic and caffeic acid were candidates for potentiating the enhanced resistance of the grafted watermelon to FON, therefore we tested the effects of the two compounds on the conidial germination and growth of FON. Both phenolic acids inhibited FON conidial germination and growth in a dose-dependent manner, and FON was much more susceptible to chlorogenic acid than to caffeic acid. In conclusion, the key factor in attaining the resistance to Fusarium wilt is grafting on the non-host root stock, however, the root exudates profile also showed some contribution in inhibiting FON. These results will help to better clarify the disease resistance mechanisms of grafted-root watermelon based on plant-microbe communication and will guide the improvement of strategies against Fusarium-mediated wilt of watermelon plants.

Evaluation of polycross sweetpotato seedlings for root yield potential ...

African Journals Online (AJOL)

The study aimed at determining the root yield potential of the sweetpotato seedlings, the variation in storage root flesh colour and response of the storage roots to major pests and diseases attacking sweetpotato in the field .The experiment was carried out in the screen house and at the Eastern experimental field of National ...

Use of cross-flow membrane filtration in a recirculating hydroponic system to suppress root disease in pepper caused by Pythium myriotylum.

Science.gov (United States)

Schuerger, Andrew C; Hammer, William

2009-05-01

Zoosporic pathogens in the genera Pythium and Phytophthora cause extensive root disease epiphytotics in recirculating hydroponic vegetable-production greenhouses. Zoospore cysts of Pythium myriotylum Drechsler were used to evaluate the effectiveness of cross-flow membrane filters to control pythiaceous pathogens in recirculating hydroponic systems. Four membrane filter brands (Honeycomb, Polypure, Polymate, and Absolife) were tested alone or in combination to determine which filters would effectively remove infective propagules of P. myriotylum from solutions and reduce disease incidence and severity. Zoospore cysts of P. myriotylum generally measured 8 to 10 microm, and it was hypothesized that filters with pore-sizespepper plants from root infection. Single-filter assays with Honeycomb and Polypure brands removed 85 to 95% of zoospore cysts when pore sizes were rated at 1, 5, 10, 20, or 30 microm. Single-filter assays of Polymate and Absolife brands were more effective, exhibiting apparently 100% removal of zoospore cysts from nutrient solutions on filters rated at 1 to 10 microm. However, plant bioassays with Honeycomb and Polymate single filters failed to give long-term protection of pepper plants. Double-filter assays with 1- and 0.5-microm Polymate filters significantly increased the protection of pepper plants grown in nutrient film technique systems but, eventually, root disease and plant wilt could be observed. Insect transmissions by shore flies were not factors in disease development. Scanning electron microscopy images of zoospore cysts entrapped on Polymate filters revealed zoospore cysts that were either fully encysted, partially encysted, or of unusually small size (3 microm in diameter). It was concluded that either the atypically small or pliable pleomorphic zoospore cysts were able to penetrate filter membranes that theoretically should have captured them.

Root rot diseases of sugarbeet (Beta vulgaris L as affected by defloliation intensity

Directory of Open Access Journals (Sweden)

Karadimos Dimitros A.

2006-01-01

Full Text Available The aim of this work was to study the effect of sugar beet re-growth after water stress defoliation on root rots of three cultivars (Europa, Rival Corsica, which were spring sown in Thessaly, central Greece, for two growing seasons (2003-04. At the beginning of July, sugar beets were subjected to water deficit with irrigation withholding. A month later, three defoliation levels (control - C, moderate - MD, severe - SD and irrigation were applied. Thus, sugar beets were forced to re-grow and three harvests (15, 30 and 40 days after defoliation - DAD were conducted. Rotted roots per hectare were counted and pathogens were identified. Data were analyzed as a four-factor randomized complete block design with years, defoliation levels, sampling times and cultivars as main factors. The number of rotted roots was increased with the defoliation level and was significantly higher for SD sugar beets (3748 roots ha–1. No significant differences were found between C and MD treatments (1543 and 2116 roots ha–1, respectively. Rival was the most susceptible cultivar to root rots. Sugar beets were more susceptible to rotting 15 and 40 DAD (2778 and 2998 roots ha–1. The causal agents of root rots were the fungi, Fusarium spp., Rhizopus stolonifer, Macrophomina phaseolina and Rhizoctonia solani.

Comparative efficacy of a red alga solieria robusta, chemical fertilizers and pesticides in managing the root diseases and growth of soybean

International Nuclear Information System (INIS)

Sultana, V.; Haque, S.E.; Baloch, G.N.; Ara, J.

2011-01-01

Application of seaweed as soil amendment for the control of soil borne plant diseases has increased in recent years due to their environment friendly role. In screen house study, a red seaweed Solieria robusta used as soil amendment showed better suppressive effect on root rotting fungus Fusarium solani than Topsin-M, a fungicide, but was found less effective than Topsin-M against Macrophomina phaseolina and Rhizoctonia solani on soybean. Solieria robusta showed similar suppressive effect on root knot nematode as did carbofuran, a nematicide. Seaweed showed slightly better effect on plant growth than urea or potash by producing taller plants, better root length and number of flowers per plant. However, mixed application of S.robusta and Topsin-M produced greater number of flowers per plant and tallest plants. (author)

Automated Root Tracking with "Root System Analyzer"

Science.gov (United States)

Schnepf, Andrea; Jin, Meina; Ockert, Charlotte; Bol, Roland; Leitner, Daniel

2015-04-01

Crucial factors for plant development are water and nutrient availability in soils. Thus, root architecture is a main aspect of plant productivity and needs to be accurately considered when describing root processes. Images of root architecture contain a huge amount of information, and image analysis helps to recover parameters describing certain root architectural and morphological traits. The majority of imaging systems for root systems are designed for two-dimensional images, such as RootReader2, GiA Roots, SmartRoot, EZ-Rhizo, and Growscreen, but most of them are semi-automated and involve mouse-clicks in each root by the user. "Root System Analyzer" is a new, fully automated approach for recovering root architectural parameters from two-dimensional images of root systems. Individual roots can still be corrected manually in a user interface if required. The algorithm starts with a sequence of segmented two-dimensional images showing the dynamic development of a root system. For each image, morphological operators are used for skeletonization. Based on this, a graph representation of the root system is created. A dynamic root architecture model helps to determine which edges of the graph belong to an individual root. The algorithm elongates each root at the root tip and simulates growth confined within the already existing graph representation. The increment of root elongation is calculated assuming constant growth. For each root, the algorithm finds all possible paths and elongates the root in the direction of the optimal path. In this way, each edge of the graph is assigned to one or more coherent roots. Image sequences of root systems are handled in such a way that the previous image is used as a starting point for the current image. The algorithm is implemented in a set of Matlab m-files. Output of Root System Analyzer is a data structure that includes for each root an identification number, the branching order, the time of emergence, the parent

Republished review: Surgical management of aortic root disease in Marfan syndrome and other congenital disorders associated with aortic root aneurysms.

Science.gov (United States)

Treasure, Tom; Takkenberg, J J M; Pepper, John

2016-02-01

Elective root replacement in Marfan syndrome has improved life expectancy in affected patients. Three forms of surgery are now available: total root replacement (TRR) with a valved conduit, valve sparing root replacement (VSRR) and personalised external aortic root support (PEARS) with a macroporous mesh sleeve. TRR can be performed irrespective of aortic dimensions and a mechanical replacement valve is a secure and near certain means of correcting aortic valve regurgitation but has thromboembolic and bleeding risks. VSRR offers freedom from anticoagulation and attendant risks of bleeding but reoperation for aortic regurgitation runs at 1.3% per annum. A prospective multi-institutional study has found this to be an underestimate of the true rate of valve-related adverse events. PEARS conserves the aortic root anatomy and optimises the chance of maintaining valve function but average follow-up is under 5 years and so the long-term results are yet to be determined. Patients are on average in their 30s and so the cumulative lifetime need for reoperation, and of any valve-related complications, are consequently substantial. With lowering surgical risk of prophylactic root replacement, the threshold for intervention has reduced progressively over 30 years to 4.5 cm and so an increasing number of patients who are not destined to have a dissection are now having root replacement. In evaluation of these three forms of surgery, the number needed to treat to prevent dissection and the balance of net benefit and harm in future patients must be considered. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Applications of volatile compounds acquired from Muscodor heveae against white root rot disease in rubber trees (Hevea brasiliensis Müll. Arg.) and relevant allelopathy effects.

Science.gov (United States)

Siri-Udom, Sakuntala; Suwannarach, Nakarin; Lumyong, Saisamorn

The bioactive compounds of the volatile metabolite-producing endophytic fungus, Muscodor heveae, were examined by the process of biofumigation for the purposes of controlling white root rot disease in rubber trees (Hevea brasiliensis Müll. Arg.). Volatile organic compounds (VOCs) of M. heveae possess antimicrobial activity against Rigidoporus microporus in vitro with 100 % growth inhibition. The synthetic volatile compounds test confirmed that the major component, 3-methylbutan-1-ol, and the minor compounds, 3-methylbutyl acetate and 2-methylpropanoic acid, inhibited root and shoot growth in the tested plants 3-methylbutan-1-ol showed ED 50 value and MIQ value on seed germination of ruzi grass, Arabidopsis thaliana Col-0 and tomato at 10, 5 and 5 μL -1 airspace, respectively. In vivo tests were carried out under greenhouse conditions using M. heveae inoculum fumigated soil that had been inoculated with R. microporus inoculum. After which, all seven treatments were compared. Significant differences were observed with a disease score at 150 d after treatment. Biofumigation by M. heveae showed great suppression of the disease. Biocontrol treatments; RMH40 (40 g kg -1 M. heveae inoculum) and RMH80 (80 g kg -1 M. heveae inoculum) were not found to be significantly different when compared with fungicide treatment (RT) and the non-infected control, but results were found to be significantly different from R. microporus infested (R) treatment. RMH40 and RMH80 revealed a low disease scores with a high survival rate of rubber tree seedling at 100 %, while R treatment showed the highest disease score of 4.8 ± 0.5 with a survival rate of rubber tree seedling at 25 %. The infected roots, appearing as a white colour. We have concluded that the bioactive VOCs of M. heveae would be an alternative method for the control of white root rot disease in rubber trees. Copyright © 2017 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

High-throughput sequencing of black pepper root transcriptome

Science.gov (United States)

2012-01-01

Background Black pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major limitation in the culture of this crop. The major diseases are root rot and foot rot, which are results of root infection by Fusarium solani and Phytophtora capsici, respectively. Understanding the molecular interaction between the pathogens and the host’s root region is important for obtaining resistant cultivars by biotechnological breeding. Genetic and molecular data for this species, though, are limited. In this paper, RNA-Seq technology has been employed, for the first time, to describe the root transcriptome of black pepper. Results The root transcriptome of black pepper was sequenced by the NGS SOLiD platform and assembled using the multiple-k method. Blast2Go and orthoMCL methods were used to annotate 10338 unigenes. The 4472 predicted proteins showed about 52% homology with the Arabidopsis proteome. Two root proteomes identified 615 proteins, which seem to define the plant’s root pattern. Simple-sequence repeats were identified that may be useful in studies of genetic diversity and may have applications in biotechnology and ecology. Conclusions This dataset of 10338 unigenes is crucially important for the biotechnological breeding of black pepper and the ecogenomics of the Magnoliids, a major group of basal angiosperms. PMID:22984782

High-throughput sequencing of black pepper root transcriptome

Directory of Open Access Journals (Sweden)

Gordo Sheila MC

2012-09-01

Full Text Available Abstract Background Black pepper (Piper nigrum L. is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major limitation in the culture of this crop. The major diseases are root rot and foot rot, which are results of root infection by Fusarium solani and Phytophtora capsici, respectively. Understanding the molecular interaction between the pathogens and the host’s root region is important for obtaining resistant cultivars by biotechnological breeding. Genetic and molecular data for this species, though, are limited. In this paper, RNA-Seq technology has been employed, for the first time, to describe the root transcriptome of black pepper. Results The root transcriptome of black pepper was sequenced by the NGS SOLiD platform and assembled using the multiple-k method. Blast2Go and orthoMCL methods were used to annotate 10338 unigenes. The 4472 predicted proteins showed about 52% homology with the Arabidopsis proteome. Two root proteomes identified 615 proteins, which seem to define the plant’s root pattern. Simple-sequence repeats were identified that may be useful in studies of genetic diversity and may have applications in biotechnology and ecology. Conclusions This dataset of 10338 unigenes is crucially important for the biotechnological breeding of black pepper and the ecogenomics of the Magnoliids, a major group of basal angiosperms.

Management of root rot and root knot disease of mungbean with the application of mycorrhizospheric fluorescent pseudomonas under field condition

International Nuclear Information System (INIS)

Bokhari, S.S.; Tariq, S.; Ali, S.A.

2014-01-01

The mycorrhizosphere is the region around a mycorrhizal fungus in which nutrients released from the hyphae increases microbial population and its activities. In this study five mycorrhizospheric fluorescent Pseudomonas (MRFP) were evaluated for biocontrol potential under field condition using mungbean (Vigna radiata) as test plant. MRFP-249 significantly reduced Fusarium solani, Rhizoctonia solani and Macrophomina phaseolina. Whereas MRFP246 and MRFP-247 were also found effective against M. phaseolina. Mycorrhizospheric fluorescent Pseudomonas were also found effective against root knot nematode by reducing the galls on roots and nematode's penetration in roots. Highest fresh shoot weight and plant height was produced by MRFP-248. Plants grown in soil treated with Pseudomonas showed higher number of VAM spores around the mungbean roots than untreated control plants. The mycorrhizal symbiosis should not be considered merely as bipartite, plant-fungus interaction, but should instead include the associated microorganisms, particularly fluorescent Pseudomonas. (author)

Chitosan Increases Tomato Root Colonization by Pochonia chlamydosporia and Their Combination Reduces Root-Knot Nematode Damage

Directory of Open Access Journals (Sweden)

Nuria Escudero

2017-09-01

Full Text Available The use of biological control agents could be a non-chemical alternative for management of Meloidogyne spp. [root-knot nematodes (RKN], the most damaging plant-parasitic nematodes for horticultural crops worldwide. Pochonia chlamydosporia is a fungal parasite of RKN eggs that can colonize endophytically roots of several cultivated plant species, but in field applications the fungus shows a low persistence and efficiency in RKN management. The combined use of P. chlamydosporia with an enhancer could help its ability to develop in soil and colonize roots, thereby increasing its efficiency against nematodes. Previous work has shown that chitosan enhances P. chlamydosporia sporulation and production of extracellular enzymes, as well as nematode egg parasitism in laboratory bioassays. This work shows that chitosan at low concentrations (up to 0.1 mg ml-1 do not affect the viability and germination of P. chlamydosporia chlamydospores and improves mycelial growth respect to treatments without chitosan. Tomato plants irrigated with chitosan (same dose limit increased root weight and length after 30 days. Chitosan irrigation increased dry shoot and fresh root weight of tomato plants inoculated with Meloidogyne javanica, root length when they were inoculated with P. chlamydosporia, and dry shoot weight of plants inoculated with both P. chlamydosporia and M. javanica. Chitosan irrigation significantly enhanced root colonization by P. chlamydosporia, but neither nematode infection per plant nor fungal egg parasitism was affected. Tomato plants cultivated in a mid-suppressive (29.3 ± 4.7% RKN egg infection non-sterilized clay loam soil and irrigated with chitosan had enhanced shoot growth, reduced RKN multiplication, and disease severity. Chitosan irrigation in a highly suppressive (73.7 ± 2.6% RKN egg infection sterilized-sandy loam soil reduced RKN multiplication in tomato. However, chitosan did not affect disease severity or plant growth irrespective of

Detection of White Root Disease (Rigidoporus Microporus) in Various Soil Types in the Rubber Plantations Based on The Serological Reaction

Science.gov (United States)

Indriani Dalimunthe, Cici; Tistama, Radite; Wahyuni, Sri

2017-12-01

The Conventional detection of White Root Disease (Rigidoporus microporus, WRD) still uses the visual method based on an abnormal color of leaf or mycelium growth on the tap root neck. The method was less effective and less efficient. The serological technique uses yolk chicken antibodies induced by immunization with mycelium extract. The purpose of this research was to examine the consistency of selected antibodies in detecting root fungi at various soil types in the rubber plantations. This research used a Completely Randomized Design non-factorial with twelve (12) treatments and two (2) replications. The results showed that the antibodies could detect WRD in various soils types. The serological detection was higher precisely than visual observation. The development of WRD mycelium varies depending on the soil types and it was different in the each estate area. In addition, this research is expected to get a serology kit to detect early symptoms of WRD in the rubber plants.

Effect of length of interval between cereal rye cover crop termination and corn planting on seedling root disease and corn growth

Science.gov (United States)

Cereal rye cover crops terminated immediately before corn planting can sometimes reduce corn population, early growth, and yield. We hypothesized that cereal rye may act as a green bridge for corn pathogens and may increase corn seedling root disease. A field experiment was conducted over two years ...

aqueous root extract on spermatogenesis

African Journals Online (AJOL)

Four groups were gavaged with the whole plant or root aqueous extract in low or high doses. The male ... motility and morphology as well as chromatin integrity were evaluated. Results: Serum ... Treatment of disease began long ago with the.

A scanning electron microscopy study of diseased root surfaces conditioned with EDTA gel plus Cetavlon after scaling and root planing.

Science.gov (United States)

Martins Júnior, Walter; De Rossi, Andiara; Samih Georges Abi Rached, Ricardo; Rossi, Marcos Antonio

2011-01-01

In the present investigation, a scanning electron microscopy analysis was performed to evaluate the effects of the topical application of ethylenediaminetetraacetic acid (EDTA) gel associated with Cetavlon (EDTAC) in removing the smear layer and exposing collagen fibers following root surface instrumentation. Twenty-eight teeth from adult humans, single rooted and scheduled for extraction due to periodontal reasons, were selected. Each tooth was submitted to manual (scaling and root planing) instrumentation alone or combined with ultrasonic instruments, with or without etching using a 24% EDTAC gel. Following extraction, specimens were processed and examined under a scanning electron microscope. A comparative morphological semi-quantitative analysis was performed; the intensity of the smear layer and the decalcification of cementum and dentinal surfaces were graded in 12 sets using an arbitrary scale ranging from 1 (area covered by a smear layer) to 4 (no smear layer). Root debridement with hand instruments alone or combined with ultrasonic instruments resulted in a similar smear layer covering the root surfaces. The smear layer was successfully removed from the surfaces treated with EDTAC, which exhibited numerous exposed dentinal tubules and collagen fibers. This study supports the hypothesis that manual instrumentation alone or instrumentation combined with ultrasonic instrumentation is unable to remove the smear layer, whereas the subsequent topical application of EDTAC gel effectively removes the smear layer, uncovers dentinal openings and exposes collagen fibers.

Fusarium spp. and Pinus strobus seedlings: root disease pathogens and taxa associated with seed

Science.gov (United States)

C. M. Ocamb; J. Juzwik; F. B. Martin

2002-01-01

Eastern white pine (Pinus strobus L .) seeds were sown in soil infested wlth Fusarium proliferatum, root necrosis developed on seedling roots, and F. proliferatum as reisolated from symptomatic roots; thus, demonstrating that F. proliferatum is pathogenic to eastern white pine seedling. Soils...

MANAGEMENT OF ROOT ROT IN AVOCADO TREES

Directory of Open Access Journals (Sweden)

SIMONE RODRIGUES DA SILVA

Full Text Available ABSTRACT Root rot (Phytophthora cinnamomi Rands is one of the most restrictive factors to avocado growing in main producing regions worldwide. In Brazil, scientific reports on the effectiveness of control methods are scarce. The objective of this study was to evaluate the efficiency of gypsum applications and dolomitic limestone to the soil and potassium phosphite sprays in controlling this disease in ‘Hass’ avocado, grown without irrigation. The application of dolomitic limestone or gypsum alone is not effective to recover plants affected by root rot. The application of potassium phosphite, combined or not with dolomitic lime or gypsum enables the partial recovery ‘Hass’ avocado plants affected by the disease.

Reoperative aortic root replacement: Outcome in a contemporary series.

Science.gov (United States)

Esaki, Jiro; Leshnower, Bradley G; Binongo, Jose N; Lasanajak, Yi; McPherson, LaRonica; Thourani, Vinod H; Chen, Edward P

2017-09-01

Reoperative aortic root replacement is a challenging procedure associated with significant mortality and morbidity. The purpose of this study was to investigate the outcomes of reoperative aortic root replacement when performed in a number of complex clinical settings and to identify risk factors for operative mortality and long-term survival. From 2006 to 2015, 280 consecutive patients at an academic center underwent reoperative aortic root replacement after a variety of previous aortic or cardiac operations. Logistic regression and extended Cox proportional hazards regression analyses were used to determine risk factors for operative mortality and long-term survival, respectively. The mean age of patients was 52.5 ± 14.1 years. Prior operations included proximal aortic replacement in 113 patients, valve surgery in 162 patients, and coronary artery bypass grafting in 46 patients. Concomitant procedures included arch replacement in 135 patients, coronary artery bypass grafting in 68 patients, and mitral valve repair/replacement in 18 patients. Operative mortality was 14.3%. Five-year survival was 74.0%. Univariable analysis did not find previous root replacement, prior proximal aortic surgery, and concomitant arch replacement to be risk factors for operative mortality. In the multivariable analysis, chronic lung disease, prior myocardial infarction, and concomitant mitral valve surgery were risk factors for operative mortality. Age, peripheral artery disease, emergency, and concomitant mitral valve surgery were risk factors for mortality in the late phase. Reoperative aortic root replacement represents complex procedures carrying significant morbidity and mortality. Chronic lung disease, prior myocardial infarction, and concomitant mitral valve surgery were risk factors for operative mortality. Age, peripheral artery disease, emergency, and concomitant mitral valve surgery were risk factors for long-term mortality. Copyright © 2017 The American Association for

Rhizoctonia root rot (Rhizoctoni solani K ü h n of sugar beet in province Vojvodina

Directory of Open Access Journals (Sweden)

Stojšin Vera B.

2006-01-01

Full Text Available Sugar beet root rot appears regularly each year, but its intensity depends on agro ecological conditions. The predominant causers of root rot in Vojvodina are fungi from Fusarium genus and species Macrophomina phaseolina. Over the last couple of years, more intense occurrence of Rhizoctonia root rot has been observed. Rhizoctonia solani, the causal agent of root rot is present in sugar beet fields. During 2000-2005, on the territory of Vojvodina, the frequency of Rhizoctonia solani in phytopathological isolations from rotted sugar beet roots was between 0,0-18,2%. The intensity of the disease depends on localities, agro ecological conditions and genotypes. Symptoms of Rhizoctonia root rot were registered at some localities in all regions of Vojvodina: Srem, Banat and Bačka. The disease appearance is above all local. It occurs in small patches, on heavy, non-structured soil and on depressed wet parts of plots. Individual diseased plants can be found during July. Brown rot appears on sugar beet roots, with dried tissue on surface, which is present on the tail as well as on the middle part and the head of root. Tissues with described symptoms are deeper regarding the healthy part of root. On vertical root section, the necrotic changes are clearly visible comparing to tissue section without symptoms. The heavily infected tissue forms fissures on roots in most cases. Besides the above-mentioned symptoms on roots, the plant wilting and leaf handle necrosis as well as leaf dying are also observed. When rot spreads to the whole root head, plants quickly die.

First report of Fusarium proliferatum causing Fusarium root disease on sugar pine (Pinus lambertiana) in a forest container nursery in California

Science.gov (United States)

J. E. Stewart; K. Otto; G. A. Cline; Kas Dumroese; Ned Klopfenstein; M. -S. Kim

2016-01-01

Fusarium species, specifically F. commune, F. proliferatum, and F. solani, can cause severe damping-off and root disease in container and bareroot forest nurseries throughout North America. Many conifer and hardwood species can be affected, but Douglas-fir (Pseudotsuga menziesii), western white pine (Pinus monticola), and ponderosa pine (P. ponderosa) are known to be...

Linking fungal communities in roots, rhizosphere, and soil to the health status of Pisum sativum

DEFF Research Database (Denmark)

Xu, Lihui; Ravnskov, Sabine; Larsen, John

2012-01-01

the three fields identified a number of OTUs that were more abundant in healthy roots. Pathogens such as Fusarium oxysporum were abundant in diseased roots in some fields. Patterns of disease and causal agents of root rot were different among the three fields, which were also reflected in fungal communities...

Root resorption: Focus on signs and symptoms of importance for avoiding root resorption during orthodontic treatment

Directory of Open Access Journals (Sweden)

Inger Kjaer

2014-01-01

Full Text Available Introduction: This paper summarizes the different conditions, which have a well-known influence on the resorption of tooth roots, exemplified by trauma and orthodontic treatment. The concept of the paper is to summarize and explain symptoms and signs of importance for avoiding resorption during orthodontic treatment. The Hypothesis: The hypothesis in this paper is that three different tissue layers covering the root in the so-called periroot sheet can explain signs and symptoms of importance for avoiding root resorption during orthodontic treatment. These different tissue layers are; outermost - an ectodermal tissue layer (Malassez′s epithelium, a middle layer - composed by the collagen-mesodermal tissue layer, and an innermost root-close innervation layer. Abnormalities in one of these tissue layers are thought to cause inflammatory processes in the periodontal membrane comparable to inflammatory processes provoked by trauma and orthodontic pressure. Inflammatory reactions are followed by resorptive processes in the periroot sheet and along the root surface. Evaluation of the Hypothesis: Different morphologies in the dentition are signs of abnormal epithelium or an abnormal mesodermal layer. It has formerly been demonstrated how demyelinization of the myelin sheaths in the peripheral nerves close to the root provoke resorption. Accordingly, conditions affecting these tissue layers can be associated not only with different morphologies but also with general symptoms and diseases (e.g., ectodermal dysplasia and hypophosphatasia.

Genetic association among root morphology, root quality and root yield in ashwagandha (Withania somnifera)

OpenAIRE

Kumar Ramesh R.; Reddy Anjaneya Prasanna L.; Subbaiah Chinna J.; Kumar Niranjana A.; Prasad Nagendra H.N.; Bhukya Balakishan

2011-01-01

Ashwagandha (Withania somnifera) is a dryland medicinal crop and roots are used as valuable drug in traditional systems of medicine. Morphological variants (morphotypes) and the parental populations were evaluated for root - morphometric, quality and yield traits to study genetic association among them. Root morphometric traits (root length, root diameter, number of secondary roots/ plant) and crude fiber content exhibited strong association among them and ...

Root rot symptoms in sugar beet lines caused by Fusarium oxysporum f. sp. betae

Science.gov (United States)

The soil-borne fungus Fusarium oxysporum may cause both Fusarium yellows and Fusarium root rot diseases with severe yield losses in cultivated sugar beet worldwide. These two diseases cause similar foliar symptoms but different root response and have been proposed to be due to two distinct F. oxyspo...

Management of Root Knot Nematode on Tomato through Grafting Root Stock of Solanum sisymbriifolium

Directory of Open Access Journals (Sweden)

Suraj Baidya

2017-05-01

Full Text Available The root-knot nematodes (Meloidogyne spp are difficult to manage once established in the field because of their wide host range, and soil-borne nature. Thus, the aim of the present study was to examine the use of resistant root stock of wild brinjal (Solanum sisymbriifolium to reduce the loss caused by the nematodes on tomato. For the management of root-knot nematodes, grafted plant with resistant root stock of the wild brinjal was tested under farmers’ field conditions at Hemza of Kaski district. Grafted and non-grafted plants were produced in root-knot nematode-free soil. Around three week-old grafted and non-grafted tomato plants were transplanted in four different plastic tunnels where root-knot nematodes had been reported previously. The plants were planted in diagonal position to each other as a pair plot in 80 × 60 cm2 spacing in an average of 20 × 7 m2 plastic tunnels. Galling Index (GI was recorded three times in five randomly selected plants in each plot at 60 days intervals. The first observation was recorded two months after transplanting. Total fruit yield was recorded from same plants. In the grafted plants, the root system was totally free from gall whereas in an average of 7.5 GI in 0-10 scale was recorded in the non-grafted plants. Fruits were harvested from time to time and cumulated after final harvest to calculate the total fruit yield. It was estimated that on an average tomato fruit yield was significantly (P>0.05 increased by 37 percent in the grafted plants compared with the non-grafted plants. Grafting technology could be used effectively for cultivation of commonly grown varieties, which are susceptible to root-knot nematodes in disease prone areas. This can be used as an alternative technology for reducing the use of hazardous pesticides for enhancing commercial organic tomato production.

Reoperative Aortic Root Replacement in Patients with Previous Aortic Root or Aortic Valve Procedures

Directory of Open Access Journals (Sweden)

Byung Kwon Chong

2016-08-01

Full Text Available Background: Generalization of standardized surgical techniques to treat aortic valve (AV and aortic root diseases has benefited large numbers of patients. As a consequence of the proliferation of patients receiving aortic root surgeries, surgeons are more frequently challenged by reoperative aortic root procedures. The aim of this study was to evaluate the outcomes of redo-aortic root replacement (ARR. Methods: We retrospectively reviewed 66 patients (36 male; mean age, 44.5±9.5 years who underwent redo-ARR following AV or aortic root procedures between April 1995 and June 2015. Results: Emergency surgeries comprised 43.9% (n=29. Indications for the redo-ARR were aneurysm (n=12, pseudoaneurysm (n=1, or dissection (n=6 of the residual native aortic sinus in 19 patients (28.8%, native AV dysfunction in 8 patients (12.1%, structural dysfunction of an implanted bioprosthetic AV in 19 patients (28.8%, and infection of previously replaced AV or proximal aortic grafts in 30 patients (45.5%. There were 3 early deaths (4.5%. During follow- up (median, 54.65 months; quartile 1–3, 17.93 to 95.71 months, there were 14 late deaths (21.2%, and 9 valve-related complications including reoperation of the aortic root in 1 patient, infective endocarditis in 3 patients, and hemorrhagic events in 5 patients. Overall survival and event-free survival rates at 5 years were 81.5%±5.1% and 76.4%±5.4%, respectively. Conclusion: Despite technical challenges and a high rate of emergency conditions in patients requiring redo-ARR, early and late outcomes were acceptable in these patients.

Detection and quantification of Leptographium wageneri, the cause of black-stain root disease, from bark beetles (Coleoptera: Scolytidae) in North California using regular and real-time PCR

Science.gov (United States)

Wolfgang Schweigkofler; William J. Otrosina; Sheri L. Smith; Daniel R. Cluck; Kevin Maeda; Kabir G. Peay; Matteo Garbelotto

2005-01-01

Black-stain root disease is a threat to conifer forests in western North America. The disease is caused by the ophiostomatoid fungus Leptographium wageneri (W.B. Kendr.) M.J. Wingf., which is associated with a number of bark beetle (Coleoptera: Scolytidae) and weevil species (Coleoptera: Curculionidae). We developed a polymerase chain reaction test...

Root growth, secondary root formation and root gravitropism in carotenoid-deficient seedlings of Zea mays L

Science.gov (United States)

Ng, Y. K.; Moore, R.

1985-01-01

The effect of ABA on root growth, secondary-root formation and root gravitropism in seedlings of Zea mays was investigated by using Fluridone-treated seedlings and a viviparous mutant, both of which lack carotenoids and ABA. Primary roots of seedlings grown in the presence of Fluridone grew significantly slower than those of control (i.e. untreated) roots. Elongation of Fluridone-treated roots was inhibited significantly by the exogenous application of 1 mM ABA. Exogenous application of 1 micromole and 1 nmole ABA had either no effect or only a slight stimulatory effect on root elongation, depending on the method of application. The absence of ABA in Fluridone-treated plants was not an important factor in secondary-root formation in seedlings less than 9-10 d old. However, ABA may suppress secondary-root formation in older seedlings, since 11-d-old control seedlings had significantly fewer secondary roots than Fluridone-treated seedlings. Roots of Fluridone-treated and control seedlings were graviresponsive. Similar data were obtained for vp-9 mutants of Z. mays, which are phenotypically identical to Fluridone-treated seedlings. These results indicate that ABA is necessary for neither secondary-root formation nor for positive gravitropism by primary roots.

Biochar for horticultural rooting media improvement

NARCIS (Netherlands)

Blok, Chris; Salm, van der Caroline; Hofland-Zijlstra, Jantineke; Streminska, Marta; Eveleens-Clark, Barbara; Regelink, Inge; Fryda, Lydia; Visser, Rianne

2017-01-01

Peat is used as rooting medium in greenhouse horticulture. Biochar is a sustainable alternative for the use of peat, which will reduce peat derived carbon dioxide emissions. Biochar in potting soil mixtures allegedly increases water storage, nutrient supply, microbial life and disease suppression

Microbial antagonism as a potential solution for controlling selected root pathogens of crops

Science.gov (United States)

Cooper, Sarah; Agnew, Linda; Pereg, Lily

2016-04-01

Root pathogens of crops can cause large reduction in yield, however, there is a limited range of effective methods to control such pathogens. Soilborne pathogens that infect roots often need to survive in the rhizosphere, where there is high competition from other organisms. In such hot spots of microbial activity and growth, supported by root exudates, microbes have evolved antagonistic mechanisms that give them competitive advantages in winning the limited resources. Among these mechanisms is antibiosis, with production of some significant antifungal compounds including, antibiotics, volatile organic compounds, hydrogen cyanide and lytic enzymes. Some of these mechanisms may suppress disease through controlling the growth of root pathogens. In this project we isolated various fungi and bacteria that suppress the growth of cotton pathogens in vitro. The pathogen-suppressive microbes were isolated from cotton production soils that are under different management strategies, with and without the use of organic amendments. The potential of pathogen-suppressing microbes for controlling the black root rot disease, caused by the soilborne pathogen Thielaviopsis basicola, was confirmed using soil assays. We identified isolates with potential use as inoculant for cotton production in Australia. Having isolated a diverse group of antagonistic microbes enhances the probability that some would survive well in the soil and provide an alternative approach to address the problem of root disease affecting agricultural crops.

Genetic analysis reveals efficient sexual spore dispersal at a fine spatial scale in Armillaria ostoyae, the causal agent of root-rot disease in conifers

OpenAIRE

Capedevielle, Xavier; Lung, Brigitte; Labbé, Frédéric; Dutech, Cyril; Lung-Escarmant, Brigitte

2017-01-01

Armillaria ostoyae (sometimes named A. solidipes) is a fungal species causing root diseases in numerous coniferous forests of the northern hemisphere. The importance of sexual spores for the establishment of new disease centers remains unclear, particularly in the large maritime pine plantations of southwestern France. An analysis of the genetic diversity of a local fungal population distributed over 500 ha in this French forest showed genetic recombination between genotypes to be frequent, c...

Regional aggressive root resorption caused by neuronal virus infection

DEFF Research Database (Denmark)

Kjær, Inger; Strøm, Carsten; Worsaae, Nils

2012-01-01

During orthodontic treatment, root resorption can occur unexplainably. No clear distinction has been made between resorption located within specific regions and resorption occurring generally in the dentition. The purpose is to present cases with idiopathic (of unknown origin) root resorption...... occurring regionally. Two cases of female patients, 26 and 28 years old, referred with aggressive root resorption were investigated clinically and radiographically. Anamnestic information revealed severe virus diseases during childhood, meningitis in one case and whooping cough in the other. One...... stopped when reaching regions that were innervated differently and not infected by virus. In one case, histological examination revealed multinuclear dentinoclasts. The pattern of resorption in the two cases indicates that innervation is a factor, which under normal conditions may protect the root surface...

Effectiveness of some substances in the control of carrot and parsley roots against fungal diseases.

Science.gov (United States)

Nawrocki, Jacek

2007-01-01

Field experiments were carried out in the years 2005 and 2006 on carrot cv. 'Koral' and 'Perfekcja', and parsley cv. 'Berlinska' and 'Cukrowa'. Effectiveness of substances: Biochikol 020 PC (biologically active substances BAS--chitosan 20 g/dm3), Bioczos BR (extract of garlic 10 g/1 brick) and Biosept 33 SL (extract of grapefruit 33%) on seedling roots of carrot and parsley was studied. As the standard fungicide Zaprawa Funaben T (carbendazim 20% + tiuram 45%) was used. Roots of carrot and parsley were treated one of tested substances spring immediately before planting seedling roots. During vegetation period the growth of seedling shoots and setting of seeds, and their infestation by fungal and bacterial pathogens was noticed. Among substances used for spring dressing of carrot and also parsley seedling roots, the best efficacy exhibited Zaprawa Funaben T in both years of observation. The highest yield of carrot seeds had combination roots cv. 'Koral' and parsley seeds roots cvs 'Berlińska' and 'Cukrowa' dressed Zaprawa Funaben T. Effectiveness of biopreparates Biochikol and Biosept was lower in comparison with the standard fungicide, but their protective effect was significantly higher than in control. Bioczos had the lowest control efficacy.

Root development during soil genesis: effects of root-root interactions, mycorrhizae, and substrate

Science.gov (United States)

Salinas, A.; Zaharescu, D. G.

2015-12-01

A major driver of soil formation is the colonization and transformation of rock by plants and associated microbiota. In turn, substrate chemical composition can also influence the capacity for plant colonization and development. In order to better define these relationships, a mesocosm study was set up to analyze the effect mycorrhizal fungi, plant density and rock have on root development, and to determine the effect of root morphology on weathering and soil formation. We hypothesized that plant-plant and plant-fungi interactions have a stronger influence on root architecture and rock weathering than the substrate composition alone. Buffalo grass (Bouteloua dactyloides) was grown in a controlled environment in columns filled with either granular granite, schist, rhyolite or basalt. Each substrate was given two different treatments, including grass-microbes and grass-microbes-mycorrhizae and incubated for 120, 240, and 480 days. Columns were then extracted and analyzed for root morphology, fine fraction, and pore water major element content. Preliminary results showed that plants produced more biomass in rhyolite, followed by schist, basalt, and granite, indicating that substrate composition is an important driver of root development. In support of our hypothesis, mycorrhizae was a strong driver of root development by stimulating length growth, biomass production, and branching. However, average root length and branching also appeared to decrease in response to high plant density, though this trend was only present among roots with mycorrhizal fungi. Interestingly, fine fraction production was negatively correlated with average root thickness and volume. There is also slight evidence indicating that fine fraction production is more related to substrate composition than root morphology, though this data needs to be further analyzed. Our hope is that the results of this study can one day be applied to agricultural research in order to promote the production of crops

Evaluation of the biocontrol efficacy of a Serratia marcescens strain indigenous to tea rhizosphere for the management of root rot disease in tea.

Directory of Open Access Journals (Sweden)

Gargee Dhar Purkayastha

Full Text Available The aim of the present study is to evaluate plant growth promoting and biocontrol efficacy of a Serratia marcescens strain ETR17 isolated from tea rhizosphere for the effective management of root rot disease in tea. Isolated bacterial culture ETR17 showed significant level of in vitro antagonism against nine different foliar and root pathogens of tea. The phenotypic and molecular characterization of ETR17 revealed the identity of the bacterium as Serratia marcescens. The bacterium was found to produce several hydrolytic enzymes like chitinase, protease, lipase, cellulase and plant growth promoting metabolites like IAA and siderophore. Scanning electron microscopic studies on the interaction zone between pathogen and antagonistic bacterial isolate revealed severe deformities in the fungal mycelia. Spectral analyses (LC-ESI-MS, UV-VIS spectrophotometry and HPLC and TLC indicated the presence of the antibiotics pyrrolnitrin and prodigiosin in the extracellular bacterial culture extracts. Biofilm formation by ETR17 on polystyrene surface was also observed. In vivo application of talc-based formulations prepared with the isolate ETR17 in tea plantlets under green house conditions revealed effective reduction of root-rot disease as well as plant growth promotion to a considerable extent. Viability studies with the ETR17 talc formulation showed the survivability of the isolate up to six months at room temperature. The sustenance of ETR17 (concentration of 8-9x108 cfu g-1 in the soil after the application of talc formulation was recorded by ELISA. Safety studies revealed that ETR17 did not produce hemolysin as observed in pathogenic Serratia strains. The biocontrol strain reported in this study can be used for field application in order to minimize the use of chemical fungicides for disease control in tea gardens.

Evaluation of the biocontrol efficacy of a Serratia marcescens strain indigenous to tea rhizosphere for the management of root rot disease in tea.

Science.gov (United States)

Dhar Purkayastha, Gargee; Mangar, Preeti; Saha, Aniruddha; Saha, Dipanwita

2018-01-01

The aim of the present study is to evaluate plant growth promoting and biocontrol efficacy of a Serratia marcescens strain ETR17 isolated from tea rhizosphere for the effective management of root rot disease in tea. Isolated bacterial culture ETR17 showed significant level of in vitro antagonism against nine different foliar and root pathogens of tea. The phenotypic and molecular characterization of ETR17 revealed the identity of the bacterium as Serratia marcescens. The bacterium was found to produce several hydrolytic enzymes like chitinase, protease, lipase, cellulase and plant growth promoting metabolites like IAA and siderophore. Scanning electron microscopic studies on the interaction zone between pathogen and antagonistic bacterial isolate revealed severe deformities in the fungal mycelia. Spectral analyses (LC-ESI-MS, UV-VIS spectrophotometry and HPLC) and TLC indicated the presence of the antibiotics pyrrolnitrin and prodigiosin in the extracellular bacterial culture extracts. Biofilm formation by ETR17 on polystyrene surface was also observed. In vivo application of talc-based formulations prepared with the isolate ETR17 in tea plantlets under green house conditions revealed effective reduction of root-rot disease as well as plant growth promotion to a considerable extent. Viability studies with the ETR17 talc formulation showed the survivability of the isolate up to six months at room temperature. The sustenance of ETR17 (concentration of 8-9x108 cfu g-1) in the soil after the application of talc formulation was recorded by ELISA. Safety studies revealed that ETR17 did not produce hemolysin as observed in pathogenic Serratia strains. The biocontrol strain reported in this study can be used for field application in order to minimize the use of chemical fungicides for disease control in tea gardens.

Enzymatic Activity of the Mycelium Compared with Oospore Development During Infection of Pea Roots by Aphanomyces euteiches

DEFF Research Database (Denmark)

Kjøller, Rasmus; Rosendahl, Søren

1998-01-01

To describe the disease cycle of the root pathogen Aphanomyces euteiches, enzymatic activity in the mycelium was compared with the development of oospores in pea roots. Plants were inoculated with two zoospore concentrations to achieve different disease levels. Hyphae were stained for fungal...

Effects of Fungicides, Essential Oils and Gamma Irradiated Bioagents on Chickpea Root Rot Caused by Sclerotium rolfsii

International Nuclear Information System (INIS)

El-Batal, A.I.; Fathy, R.M.; Ismail, A.A.; Mubark, H.M.; Mahmoud, Y.A.

2011-01-01

Sclerotium rolfsii (S. rolfsii) causes root rot disease in several crops including Cicer arietinum (chickpea) that results in low yield. In vitro experiments on fungicides, vitavax and monceren T, and essential oils, clove and mint oils, were conducted to control root rot disease of chickpea caused by S. rolfsii. The treatments resulted in 80 % suppression of root rot disease. Gliocladium virens (G. virens) and Gliocladium deliquescens (G. deliquescens) were effective as biocontrol agents against S. rolfsii. The results showed that these treatments greatly reduced the root rot disease in chickpea. In this study, the effect of gamma irradiation at doses 0, 0.25, 0.5, 1.0, 1.5, 2.0, 2.5 and 3.0 kGy on the pathogenecity of G. virens and G. deliquescens against S. rolfsii were investigated. The results revealed that gamma irradiation increased the pathogenecity of G. virens and G. deliquescens against S. rolfsii

Rooting gene trees without outgroups: EP rooting.

Science.gov (United States)

Sinsheimer, Janet S; Little, Roderick J A; Lake, James A

2012-01-01

Gene sequences are routinely used to determine the topologies of unrooted phylogenetic trees, but many of the most important questions in evolution require knowing both the topologies and the roots of trees. However, general algorithms for calculating rooted trees from gene and genomic sequences in the absence of gene paralogs are few. Using the principles of evolutionary parsimony (EP) (Lake JA. 1987a. A rate-independent technique for analysis of nucleic acid sequences: evolutionary parsimony. Mol Biol Evol. 4:167-181) and its extensions (Cavender, J. 1989. Mechanized derivation of linear invariants. Mol Biol Evol. 6:301-316; Nguyen T, Speed TP. 1992. A derivation of all linear invariants for a nonbalanced transversion model. J Mol Evol. 35:60-76), we explicitly enumerate all linear invariants that solely contain rooting information and derive algorithms for rooting gene trees directly from gene and genomic sequences. These new EP linear rooting invariants allow one to determine rooted trees, even in the complete absence of outgroups and gene paralogs. EP rooting invariants are explicitly derived for three taxon trees, and rules for their extension to four or more taxa are provided. The method is demonstrated using 18S ribosomal DNA to illustrate how the new animal phylogeny (Aguinaldo AMA et al. 1997. Evidence for a clade of nematodes, arthropods, and other moulting animals. Nature 387:489-493; Lake JA. 1990. Origin of the metazoa. Proc Natl Acad Sci USA 87:763-766) may be rooted directly from sequences, even when they are short and paralogs are unavailable. These results are consistent with the current root (Philippe H et al. 2011. Acoelomorph flatworms are deuterostomes related to Xenoturbella. Nature 470:255-260).

RootJS: Node.js Bindings for ROOT 6

Science.gov (United States)

Beffart, Theo; Früh, Maximilian; Haas, Christoph; Rajgopal, Sachin; Schwabe, Jonas; Wolff, Christoph; Szuba, Marek

2017-10-01

We present rootJS, an interface making it possible to seamlessly integrate ROOT 6 into applications written for Node.js, the JavaScript runtime platform increasingly commonly used to create high-performance Web applications. ROOT features can be called both directly from Node.js code and by JIT-compiling C++ macros. All rootJS methods are invoked asynchronously and support callback functions, allowing non-blocking operation of Node.js applications using them. Last but not least, our bindings have been designed to platform-independent and should therefore work on all systems supporting both ROOT 6 and Node.js. Thanks to rootJS it is now possible to create ROOT-aware Web applications taking full advantage of the high performance and extensive capabilities of Node.js. Examples include platforms for the quality assurance of acquired, reconstructed or simulated data, book-keeping and e-log systems, and even Web browser-based data visualisation and analysis.

Evaluation of bacterial leakage of four root- end filling materials: Gray Pro Root MTA, White Pro Root MTA, Root MTA and Portland Cement (type I

Directory of Open Access Journals (Sweden)

Zarabian M.

2005-07-01

Full Text Available Background and Aim: Today several materials have been used for root- end filling in endodontic surgery. Optimal properties of Pro Root MTA in in-vitro and in-vivo studies has been proven. On the other hand, based on some studies, Root MTA (Iranian Pro Root MTA and Portland cement are similar to Pro Root MTA in physical and biologic properties. The aim of this study was to evaluate bacterial leakage (amount and mean leakage time of four root- end filling materials. Materials and Methods: In this experimental in-vitro study, seventy six extracted single- rooted human teeth were randomly divided into six groups for root-end filling with gray Pro Root MTA, white Pro Root MTA, Root MTA (Iranian Pro Root MTA, Portland Cement (type I and positive and negative control groups. Root canals were instrumented using the step- back technique. Root- end filling materials were placed in 3mm ultra sonic retro preparations. Samples and microleakage model system were sterilized in autoclave. The apical 3-4 mm of the roots were immersed in phenol red with 3% lactose broth culture medium. The coronal access of each specimen was inoculated every 24h with a suspension of Streptococcus sanguis (ATCC 10556. Culture media were observed every 24h for colour change indicating bacterial contamination for 60 days. Statistical analysis was performed using log- rank test with P<0.05 as the limit of significance. Results: At the end of study 50%, 56.25%, 56.25% and 50% of specimens filled with Gray Pro Root MTA, White Pro Root MTA. Root MTA and Portland Cement (type I had evidence of leakage respectively. The mean leakage time was 37.19±6.29, 36.44±5.81, 37.69±5.97 and 34.81±6.67 days respectively. Statistical analysis of data showed no significant difference among the leakage (amount and mean leakage time of the four tested root- end filling materials (P=0.9958. Conclusion: Based on the results of this study, there were no significant differences in leakage among the four

EDTA-S: A novel root conditioning agent

Directory of Open Access Journals (Sweden)

S Srirangarajan

2012-01-01

Full Text Available Background: To evaluate the efficacy of 15% ethylenediaminetetraacetic acid (EDTA-S (EDTA with soft soap preparation for the removal of smear layer at human root surfaces. Materials and Methods: Twenty teeth indicated for extraction due to periodontal disease were sectioned using high speed cylindrical bur under copious irrigation. The root surfaces were instrumented with Gracey 7-8 curette (Hu-Friedy, 12 times to induce an "experimental smear layer". Following root planning, the root surface was cut using diamond disc and separated from the crown. Samples were randomly distributed into five groups. One group was control, saline and test groups were EDTA 15% alone, by active and passive applications (groups 2 and 3, and EDTA 15%+soft soap, by active and passive applications (groups 4 and 5. Specimens were then subjected to scanning electron microscope study. Smear layer removal was evaluated according to Sampaio et al., index. Results: EDTA-S removed the smear layer better than plain EDTA and the control group, while active application of the root conditioning agent had significant difference than the passive application of the agent. Conclusion: EDTA-S has favorable benefits over EDTA alone, and active application is better in comparison with passive application of root conditioning agent. Clinical Relevance: Removal of smear layer has been considered as an important step in periodontal regenerative therapy. Scaling and root planning alone with saline irrigation does not remove the smear layer. EDTA is a commonly used root conditioning agent in periodontal therapy. The addition of a detergent to EDTA proved to remove smear layer more efficiently than EDTA alone.

Pre- and Postoperative Imaging of the Aortic Root

Science.gov (United States)

Chan, Frandics P.; Mitchell, R. Scott; Miller, D. Craig; Fleischmann, Dominik

2016-01-01

Three-dimensional datasets acquired using computed tomography and magnetic resonance imaging are ideally suited for characterization of the aortic root. These modalities offer different advantages and limitations, which must be weighed according to the clinical context. This article provides an overview of current aortic root imaging, highlighting normal anatomy, pathologic conditions, imaging techniques, measurement thresholds, relevant surgical procedures, postoperative complications and potential imaging pitfalls. Patients with a range of clinical conditions are predisposed to aortic root disease, including Marfan syndrome, bicuspid aortic valve, vascular Ehlers-Danlos syndrome, and Loeys-Dietz syndrome. Various surgical techniques may be used to repair the aortic root, including placement of a composite valve graft, such as the Bentall and Cabrol procedures; placement of an aortic root graft with preservation of the native valve, such as the Yacoub and David techniques; and implantation of a biologic graft, such as a homograft, autograft, or xenograft. Potential imaging pitfalls in the postoperative period include mimickers of pathologic processes such as felt pledgets, graft folds, and nonabsorbable hemostatic agents. Postoperative complications that may be encountered include pseudoaneurysms, infection, and dehiscence. Radiologists should be familiar with normal aortic root anatomy, surgical procedures, and postoperative complications, to accurately interpret pre- and postoperative imaging performed for evaluation of the aortic root. Online supplemental material is available for this article. ©RSNA, 2015 PMID:26761529

Root proliferation in decaying roots and old root channels: A nutrient conservation mechanism in oligotrophic mangrove forests?

Science.gov (United States)

McKee, K.L.

2001-01-01

1. In oligotrophic habitats, proliferation of roots in nutrient-rich microsites may contribute to overall nutrient conservation by plants. Peat-based soils on mangrove islands in Belize are characterized by the presence of decaying roots and numerous old root channels (0.1-3.5 cm diameter) that become filled with living and highly branched roots of Rhizophora mangle and Avicennia germinans. The objectives of this study were to quantify the proliferation of roots in these microsites and to determine what causes this response. 2. Channels formed by the refractory remains of mangrove roots accounted for only 1-2% of total soil volume, but the proportion of roots found within channels varied from 9 to 24% of total live mass. Successive generations of roots growing inside increasingly smaller root channels were also found. 3. When artificial channels constructed of PVC pipe were buried in the peat for 2 years, those filled with nutrient-rich organic matter had six times more roots than empty or sand-filled channels, indicating a response to greater nutrient availability rather than to greater space or less impedance to root growth. 4. Root proliferation inside decaying roots may improve recovery of nutrients released from decomposing tissues before they can be leached or immobilized in this intertidal environment. Greatest root proliferation in channels occurred in interior forest zones characterized by greater soil waterlogging, which suggests that this may be a strategy for nutrient capture that minimizes oxygen losses from the whole root system. 5. Improved efficiency of nutrient acquisition at the individual plant level has implications for nutrient economy at the ecosystem level and may explain, in part, how mangroves persist and grow in nutrient-poor environments.

A single dominant Ganoderma species is responsible for root rot of ...

African Journals Online (AJOL)

Ganoderma root rot is the most serious disease affecting commercially planted Acacia mangium in plantations in Indonesia. Numerous Ganoderma spp. have been recorded from diseased trees of this species and to a lesser extent Eucalyptus, causing confusion regarding the primary cause of the disease. In this study, a ...

Control of spread of Augusta disease caused by tobacco necrosis virus in tulip by composting residual waste of small bulbs, tunics, roots and soil debris

NARCIS (Netherlands)

Asjes, C.J.; Barnhoorn, G.J.

2002-01-01

In this study the elimination of the infectious virus/fungus complex of tobacco necrosis virus (TNV; cause of Augusta disease in tulip) and Olpidium brassicae in different soil types and residual waste material of soil debris, small tulip bulbs, roots and tunics by temperature treatments of

Clinical Management of Two Root Resorption Cases in Endodontic Practice

Directory of Open Access Journals (Sweden)

Jozef Mincik

2016-01-01

Full Text Available Root resorption is a pathological process involving loss of hard dental tissues. It may occur as a consequence of dental trauma, orthodontic treatment, and bleaching, and occasionally it accompanies periodontal disease. Although the mechanism of resorption process is examined in detail, its etiology is not fully understood. Wide open apical foramen is more difficult to manage and the root canal may often overfill. In this report we present two cases of root resorption and describe means for its clinical management. We conclude that useful measure of a success or failure in managing root resorption is the persistence of the resorption process. It is a clear sign of an active ongoing inflammatory process and shows the clinical need for retreatment.

Mitral valve disease in patients with Marfan syndrome undergoing aortic root replacement.

Science.gov (United States)

Kunkala, Meghana R; Schaff, Hartzell V; Li, Zhuo; Volguina, Irina; Dietz, Harry C; LeMaire, Scott A; Coselli, Joseph S; Connolly, Heidi

2013-09-10

Cardiac manifestations of Marfan syndrome include aortic root dilation and mitral valve prolapse (MVP). Only scant data exist describing MVP in patients with Marfan syndrome undergoing aortic root replacement. We retrospectively analyzed data from 166 MFS patients with MVP who were enrolled in a prospective multicenter registry of patients who underwent aortic root aneurysm repair. Of these 166 patients, 9% had mitral regurgitation (MR) grade >2, and 10% had MR grade 2. The severity of MVP and MR was evaluated by echocardiography preoperatively and ≤ 3 years postoperatively. Forty-one patients (25%) underwent composite graft aortic valve replacement, and 125 patients (75%) underwent aortic valve-sparing procedures; both groups had similar prevalences of MR grade >2 (P=0.7). Thirty-three patients (20%) underwent concomitant mitral valve (MV) intervention (repair, n=29; replacement, n=4), including all 15 patients with MR grade >2. Only 1 patient required MV reintervention during follow-up (mean clinical follow-up, 31 ± 10 months). Echocardiography performed 21 ± 13 months postoperatively revealed MR >2 in only 3 patients (2%). One early death and 2 late deaths occurred. Although the majority of patients with Marfan syndrome who undergo elective aortic root replacement have MVP, only 20% have concomitant MV procedures. These concomitant procedures do not seem to increase operative risk. In patients with MR grade ≤ 2 who do not undergo a concomitant MV procedure, the short-term incidence of progressive MR is low; however, more follow-up is needed to determine whether patients with MVP and MR grade ≤ 2 would benefit from prophylactic MV intervention.

Tobacco Rotated with Rapeseed for Soil-Borne Phytophthora Pathogen Biocontrol: Mediated by Rapeseed Root Exudates

Directory of Open Access Journals (Sweden)

Yuting Fang

2016-06-01

Full Text Available Black shank, caused by Phytophthora parasitica var. nicotianae, is a widespread and destructive disease of tobacco. Crop rotation is essential in controlling black shank. Here, we confirmed that rotating black shank-infested fields with rapeseed (Brassica napus suppressed the incidence this disease. Further study demonstrated that rapeseed roots have a strong ability to attract zoospores and subsequently stop the swimming of zoospores into cystospores. Then, rapeseed roots secrete a series of antimicrobial compounds, including 2-butenoic acid, benzothiazole, 2-(methylthiobenzothiazole, 1-(4-ethylphenyl-ethanone, and 4-methoxyindole, to inhibit the cystospore germination and mycelial growth of P. parasitica var. nicotianae. Thus, rapeseed rotated with tobacco suppresses tobacco black shank disease through the chemical weapons secreted by rapeseed roots.

Thick root of cucumber: other susceptible plants and the effect of pH

NARCIS (Netherlands)

Gaag, van der D.J.; Paternotte, P.; Hamelink, R.

2002-01-01

Thick root is a relatively new disorder of cucumber grown in artificial substrates. Plants of cucumber, tomato, sweet pepper, lupin, anthurium, Cucurbita ficifolia, C. maxima and two lines from crosses between C. maxima and C. moschata were grown in thick root disease (TRD)-infested nutrient

Descendant root volume varies as a function of root type: estimation of root biomass lost during uprooting in Pinus pinaster.

Science.gov (United States)

Danjon, Frédéric; Caplan, Joshua S; Fortin, Mathieu; Meredieu, Céline

2013-01-01

Root systems of woody plants generally display a strong relationship between the cross-sectional area or cross-sectional diameter (CSD) of a root and the dry weight of biomass (DWd) or root volume (Vd) that has grown (i.e., is descendent) from a point. Specification of this relationship allows one to quantify root architectural patterns and estimate the amount of material lost when root systems are extracted from the soil. However, specifications of this relationship generally do not account for the fact that root systems are comprised of multiple types of roots. We assessed whether the relationship between CSD and Vd varies as a function of root type. Additionally, we sought to identify a more accurate and time-efficient method for estimating missing root volume than is currently available. We used a database that described the 3D root architecture of Pinus pinaster root systems (5, 12, or 19 years) from a stand in southwest France. We determined the relationship between CSD and Vd for 10,000 root segments from intact root branches. Models were specified that did and did not account for root type. The relationships were then applied to the diameters of 11,000 broken root ends to estimate the volume of missing roots. CSD was nearly linearly related to the square root of Vd, but the slope of the curve varied greatly as a function of root type. Sinkers and deep roots tapered rapidly, as they were limited by available soil depth. Distal shallow roots tapered gradually, as they were less limited spatially. We estimated that younger trees lost an average of 17% of root volume when excavated, while older trees lost 4%. Missing volumes were smallest in the central parts of root systems and largest in distal shallow roots. The slopes of the curves for each root type are synthetic parameters that account for differentiation due to genetics, soil properties, or mechanical stimuli. Accounting for this differentiation is critical to estimating root loss accurately.

Effects of Root Debridement With Hand Curettes and Er:YAG Laser on Chemical Properties and Ultrastructure of Periodontally-Diseased Root Surfaces Using Spectroscopy and Scanning Electron Microscopy

Science.gov (United States)

Amid, Reza; Gholami, Gholam Ali; Mojahedi, Masoud; Aghalou, Maryam; Gholami, Mohsen; Mirakhori, Mahdieh

2017-01-01

Introduction: The efficacy of erbium-doped yttrium aluminum garnet (Er:YAG) laser for root debridement in comparison with curettes has been the subject of many recent investigations. Considering the possibility of chemical and ultra-structural changes in root surfaces following laser irradiation, this study sought to assess the effects of scaling and root planing (SRP) with curettes and Er:YAG laser on chemical properties and ultrastructure of root surfaces using spectroscopy and scanning electron microscopy (SEM). Methods: In this in vitro experimental study, extracted sound human single-rooted teeth (n = 50) were randomly scaled using manual curettes alone or in conjunction with Er:YAG laser at 100 and 150 mJ/pulse output energies. The weight percentages of carbon, oxygen, phosphorous and calcium remaining on the root surfaces were calculated using spectroscopy and the surface morphology of specimens was assessed under SEM. Data were analyzed using one-way analysis of variance (ANOVA). Results: No significant differences (P > 0.05) were noted in the mean carbon, oxygen, phosphorous and calcium weight percentages on root surfaces following SRP using manual curettes with and without laser irradiation at both output energies. Laser irradiation after SRP with curettes yielded rougher surfaces compared to the use of curettes alone. Conclusion: Although laser irradiation yielded rougher surfaces, root surfaces were not significantly different in terms of chemical composition following SRP using manual curettes with and without Er:YAG laser irradiation. Er:YAG laser can be safely used as an adjunct to curettes for SRP. PMID:28652898

Structure and Composition of Vegetation on Longleaf Plantation Sites Compared to Natural Stands Occurring Along an Environmental Gradient at the Savannah River Site

Energy Technology Data Exchange (ETDEWEB)

Smith, G.P.

2000-10-01

The diversity and abundance of native grasses and herbaceous species characteristic of the longleaf savanna were compared between remnant stands that were not previously under agriculture and recent old-fields.The objective of the study was to establish a baseline for future restoration objectives and to compare the degree of degradation associated with agriculture. In most cases even the natural stands have suffered degradation as a result of fire exclusion and as such are not representative of pristine conditions. Community classification and ordination procedures were implemented to array the communities. Three distinct sub-units were identified and associated with xeric, sub-xeric, and medic types associated with texture and soil moisture. Between plantations and natural stands, the xeric group demonstrated the most similarity. The presence of a B horizon was the most important discriminate variable in both groups.

Characterizing pathways by which gravitropic effectors could move from the root cap to the root of primary roots of Zea mays

Science.gov (United States)

Moore, R.; McClelen, C. E.

1989-01-01

Plasmodesmata linking the root cap and root in primary roots Zea mays are restricted to approx. 400 protodermal cells bordering approx. 110000 microns2 of the calyptrogen of the root cap. This area is less than 10% of the cross-sectional area of the root-tip at the cap junction. Therefore, gravitropic effectors moving from the root cap to the root can move symplastically only through a relatively small area in the centre of the root. Decapped roots are non-responsive to gravity. However, decapped roots whose caps are replaced immediately after decapping are strongly graviresponsive. Thus, gravicurvature occurs only when the root cap contacts the root, and symplastic continuity between the cap and root is not required for gravicurvature. Completely removing mucilage from the root tip renders the root non-responsive to gravity. Taken together, these data suggest that gravitropic effectors move apoplastically through mucilage from the cap to the root.

Root anatomy, morphology, and longevity among root orders in Vaccinium corymbosum (Ericaceae).

Science.gov (United States)

Valenzuela-Estrada, Luis R; Vera-Caraballo, Vivianette; Ruth, Leah E; Eissenstat, David M

2008-12-01

Understanding root processes at the whole-plant or ecosystem scales requires an accounting of the range of functions within a root system. Studying root traits based on their branching order can be a powerful approach to understanding this complex system. The current study examined the highly branched root system of the ericoid plant, Vaccinium corymbosum L. (highbush blueberry) by classifying its root orders with a modified version of the morphometric approach similar to that used in hydrology for stream classification. Root anatomy provided valuable insight into variation in root function across orders. The more permanent portion of the root system occurred in 4th- and higher-order roots. Roots in these orders had radial growth; the lowest specific root length, N:C ratios, and mycorrhizal colonization; the highest tissue density and vessel number; and the coarsest root diameter. The ephemeral portion of the root system was mainly in the first three root orders. First- and 2nd-order roots were nearly anatomically identical, with similar mycorrhizal colonization and diameter, and also, despite being extremely fine, median lifespans were not very short (115-120 d; estimated with minirhizotrons). Our research underscores the value of examining root traits by root order and its implications to understanding belowground processes.

Predicting longleaf pine coarse root decomposition in the southeastern US

Science.gov (United States)

Peter H. Anderson; Kurt H. Johnsen; John R. Butnor; Carlos A. Gonzalez-Benecke; Lisa J. Samuelson

2018-01-01

Storage of belowground carbon (C) is an important component of total forest C. However, belowground C changes temporally due to forest growth and tree mortality (natural and via harvesting) and these fluctuations are critical for modeling C in forests under varying management regimes. To date, little progress has been made in quantifying the rate of decay of southern...

Contributions of roots and rootstocks to sustainable, intensified crop production.

Science.gov (United States)

Gregory, Peter J; Atkinson, Christopher J; Bengough, A Glyn; Else, Mark A; Fernández-Fernández, Felicidad; Harrison, Richard J; Schmidt, Sonja

2013-03-01

Sustainable intensification is seen as the main route for meeting the world's increasing demands for food and fibre. As demands mount for greater efficiency in the use of resources to achieve this goal, so the focus on roots and rootstocks and their role in acquiring water and nutrients, and overcoming pests and pathogens, is increasing. The purpose of this review is to explore some of the ways in which understanding root systems and their interactions with soils could contribute to the development of more sustainable systems of intensive production. Physical interactions with soil particles limit root growth if soils are dense, but root-soil contact is essential for optimal growth and uptake of water and nutrients. X-ray microtomography demonstrated that maize roots elongated more rapidly with increasing root-soil contact, as long as mechanical impedance was not limiting root elongation, while lupin was less sensitive to changes in root-soil contact. In addition to selecting for root architecture and rhizosphere properties, the growth of many plants in cultivated systems is profoundly affected by selection of an appropriate rootstock. Several mechanisms for scion control by rootstocks have been suggested, but the causal signals are still uncertain and may differ between crop species. Linkage map locations for quantitative trait loci for disease resistance and other traits of interest in rootstock breeding are becoming available. Designing root systems and rootstocks for specific environments is becoming a feasible target.

OpenSimRoot: widening the scope and application of root architectural models.

Science.gov (United States)

Postma, Johannes A; Kuppe, Christian; Owen, Markus R; Mellor, Nathan; Griffiths, Marcus; Bennett, Malcolm J; Lynch, Jonathan P; Watt, Michelle

2017-08-01

OpenSimRoot is an open-source, functional-structural plant model and mathematical description of root growth and function. We describe OpenSimRoot and its functionality to broaden the benefits of root modeling to the plant science community. OpenSimRoot is an extended version of SimRoot, established to simulate root system architecture, nutrient acquisition and plant growth. OpenSimRoot has a plugin, modular infrastructure, coupling single plant and crop stands to soil nutrient and water transport models. It estimates the value of root traits for water and nutrient acquisition in environments and plant species. The flexible OpenSimRoot design allows upscaling from root anatomy to plant community to estimate the following: resource costs of developmental and anatomical traits; trait synergisms; and (interspecies) root competition. OpenSimRoot can model three-dimensional images from magnetic resonance imaging (MRI) and X-ray computed tomography (CT) of roots in soil. New modules include: soil water-dependent water uptake and xylem flow; tiller formation; evapotranspiration; simultaneous simulation of mobile solutes; mesh refinement; and root growth plasticity. OpenSimRoot integrates plant phenotypic data with environmental metadata to support experimental designs and to gain a mechanistic understanding at system scales. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Light as stress factor to plant roots - case of root halotropism.

Science.gov (United States)

Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

2014-01-01

Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives.

Pharmacognostic Study of Argyreia pilosa Wight & Arn. Root

Directory of Open Access Journals (Sweden)

prasanth DSNBK

2017-12-01

Full Text Available Background: Ethnomedicinally, the plant Argyreia pilosa Wight & Arn. (Convolvulaceae has long been utilized in various disorders in the conventional system; most significantly it is utilized against sexually transmitted diseases, skin troubles, diabetes, rheumatism, cough, and quinsy. The key challenge experienced in the standardization of herbal drugs is the lack of proper identification of plant source. Therefore there is certainly have to establish quality control parameters by utilizing pharmacognostic and phytochemical evaluation, that ensure the purity, safety, and efficacy of medicinal plant A. pilosa. Aim: To assess pharmacognostic characteristics which include macroscopic, microscopic and physicochemical parameters of the root of A. pilosa. Methods: Micro and Macroscopic characters of fresh and dried root samples were investigated. Physicochemical parameters had been done by using WHO recommended parameters, preliminary phytochemical and fluorescent analysis of root sample were carried out for proper identification and standardization of root of A. pilosa. Results: The color, shape, size, odor, and surface characteristics were noted from the root and powdered root material of A. pilosa. Light electron microscope i.e., Olympus CX-21i trinocular Microscope images of cross section of root and powdered root revealed that the presence of cork cells, Xylem fibers with tapered ends, lignified xylem vessels, phloem fibers, medullary rays, sclerides and parenchymatous cells. Phytochemical screening showed the presence of flavonoids, alkaloids, tannins, phenols, steroids, acid compounds, glycosides, amino acids, and proteins. Physicochemical parameters such as moisture content, ash value, extractive value and fluorescent behavior of root powder were determined. These parameters are helpful to differentiate the powdered drug material. Conclusion: The current research is useful in order to supplement the information with regard to its

Pathogenicity and genetic diversity of Fusarium oxysporum causing soybean root rot in northeast China

Science.gov (United States)

Soybean is an important edible legume cultivated around the world. However, soybean production is seriously impacted by the widespread occurrence of root rot disease. In this study, genetic diversity and pathogenicity of Fusarium oxysporum associated with root rot of soybean in Heilongjiang province...

effects of different concentrations of auxins on rooting and root

African Journals Online (AJOL)

Preferred Customer

ABSTRACT: The effect of auxins and their different concentrations on rooting and root ... primary root length and the longest primary root was recorded with the ... ceuticals, lubricants, foods, electrical insulators, .... stem cuttings of jojoba treated with IBA and NAA, .... increasing cell division and enlargement at each.

Seedling root targets

Science.gov (United States)

Diane L. Haase

2011-01-01

Roots are critical to seedling performance after outplanting. Although root quality is not as quick and simple to measure as shoot quality, target root characteristics should be included in any seedling quality assessment program. This paper provides a brief review of root characteristics most commonly targeted for operational seedling production. These are: root mass...

Lumbar Nerve Root Occupancy in the Foramen in Achondroplasia

Science.gov (United States)

Modi, Hitesh N.; Song, Hae-Ryong; Yang, Jae Hyuk

2008-01-01

Lumbar stenosis is common in patients with achondroplasia because of narrowing of the neural canal. However, it is unclear what causes stenosis, narrowing of the central canal or foramina. We performed a morphometric analysis of the lumbar nerve roots and intervertebral foramen in 17 patients (170 nerve roots and foramina) with achondroplasia (eight symptomatic, nine asymptomatic) and compared the data with that from 20 (200 nerve roots and foramina) asymptomatic patients without achondroplasia presenting with low back pain without neurologic symptoms. The measurements were made on left and right parasagittal MRI scans of the lumbar spine. The foramen area and root area were reduced at all levels from L1 to L5 between the patients with achondroplasia (Groups I and II) and the nonachondroplasia group (Group III). The percentage of nerve root occupancy in the foramen between Group I and Group II as compared with the patients without achondroplasia was similar or lower. This implied the lumbar nerve root size in patients with achondroplasia was smaller than that of the normal population and thus there is no effective nerve root compression. Symptoms of lumbar stenosis in achondroplasia may be arising from the central canal secondary to degenerative disc disease rather than a true foraminal stenosis. Level of Evidence: Level I, prognostic study. See the Guidelines for Authors for a complete description of levels of evidence. PMID:18259829

Effect of Root Moisture Content and Diameter on Root Tensile Properties

Science.gov (United States)

Yang, Yuanjun; Chen, Lihua; Li, Ning; Zhang, Qiufen

2016-01-01

The stabilization of slopes by vegetation has been a topical issue for many years. Root mechanical characteristics significantly influence soil reinforcement; therefore it is necessary to research into the indicators of root tensile properties. In this study, we explored the influence of root moisture content on tensile resistance and strength with different root diameters and for different tree species. Betula platyphylla, Quercus mongolica, Pinus tabulaeformis, and Larix gmelinii, the most popular tree species used for slope stabilization in the rocky mountainous areas of northern China, were used in this study. A tensile test was conducted after root samples were grouped by diameter and moisture content. The results showedthat:1) root moisture content had a significant influence on tensile properties; 2) slightly loss of root moisture content could enhance tensile strength, but too much loss of water resulted in weaker capacity for root elongation, and consequently reduced tensile strength; 3) root diameter had a strong positive correlation with tensile resistance; and4) the roots of Betula platyphylla had the best tensile properties when both diameter and moisture content being controlled. These findings improve our understanding of root tensile properties with root size and moisture, and could be useful for slope stabilization using vegetation. PMID:27003872

Piriformospora indica root colonization triggers local and systemic root responses and inhibits secondary colonization of distal roots.

Science.gov (United States)

Pedrotti, Lorenzo; Mueller, Martin J; Waller, Frank

2013-01-01

Piriformosporaindica is a basidiomycete fungus colonizing roots of a wide range of higher plants, including crop plants and the model plant Arabidopsis thaliana. Previous studies have shown that P. indica improves growth, and enhances systemic pathogen resistance in leaves of host plants. To investigate systemic effects within the root system, we established a hydroponic split-root cultivation system for Arabidopsis. Using quantitative real-time PCR, we show that initial P. indica colonization triggers a local, transient response of several defense-related transcripts, of which some were also induced in shoots and in distal, non-colonized roots of the same plant. Systemic effects on distal roots included the inhibition of secondary P. indica colonization. Faster and stronger induction of defense-related transcripts during secondary inoculation revealed that a P. indica pretreatment triggers root-wide priming of defense responses, which could cause the observed reduction of secondary colonization levels. Secondary P. indica colonization also induced defense responses in distant, already colonized parts of the root. Endophytic fungi therefore trigger a spatially specific response in directly colonized and in systemic root tissues of host plants.

Root canal treatment of bilateral three-rooted maxillary first premolars

Directory of Open Access Journals (Sweden)

Bhavana Gandhi

2012-01-01

Full Text Available In endodontics, several anatomic variations occur in teeth, both externally and in the internal root morphology, which play a very significant role in the diagnosis and treatment outcome. A thorough knowledge of the root canal anatomy, careful interpretation of the angled radiographs, proper endodontic access cavity preparation, and exploration of the root canal are the prerequisites for endodontic success. In a maxillary first premolar, it is rare to find extra roots and canals, and the aim of the present article is to report a case about the successful diagnosis and clinical management of bilateral three-rooted maxillary first premolars, with three independent root canals.

Laminated Root Rot of Western Conifers

Science.gov (United States)

E.E. Nelson; N.E. Martin; R.E. Williams

1981-01-01

Laminated root rot is caused by the native fungus Phellinus weirii (Murr.) Gilb. It occurs throughout the Northwestern United States and in southern British Columbia, Canada. The disease has also been reported in Japan and Manchuria. In the United States, the pathogen is most destructive in pure Douglas-fir stands west of the crest of the Cascade Range in Washington...

Root canal treatment of a maxillary first premolar with three roots

OpenAIRE

Mathew, Josey; Devadathan, Aravindan; Syriac, Gibi; Shamini, Sai

2015-01-01

Successful root canal treatment needs a thorough knowledge of both internal and external anatomy of a tooth. Variations in root canal anatomy constitute an impressive challenge to the successful completion of endodontic treatment. Undetected extra roots and canals are a major reason for failed root canal treatment. Three separate roots in a maxillary first premolar have a very low incidence of 0.5?6%. Three rooted premolars are anatomically similar to molars and are sometimes called ?small mo...

Medico-legal aspects of vertical root fractures in root filled teeth

DEFF Research Database (Denmark)

Rosen, E; Tsesis, I; Tamse, A

2012-01-01

To analyse the medico-legal aspects of vertical root fracture (VRF) following root canal treatment (RCT).......To analyse the medico-legal aspects of vertical root fracture (VRF) following root canal treatment (RCT)....

Longleaf pine bud development: influence of seedling nutrition

Science.gov (United States)

J. P. Barnett; D. P. Jackson; R. K. Dumroese

2010-01-01

A subset of seedlings from a larger study (Jackson and others 2006, 2007) were selected and evaluated for two growing seasons to relate bud development, and root-collar diameter (RCD), and height growth with three nursery fertilization rates. We chose seedlings in the 0.5 (lowest), 2.0 (mid-range), and 4.0 (highest) mg of nitrogen per seedling treatments. Buds moved...

Effects of cell suspension and cell·free culture filtrate of Pseudomonas aeruginosa in the control of root rot-root kont disease complex of tomato (Lycopersicon esculentum Mill.

Directory of Open Access Journals (Sweden)

I. A. Siddiqui

2013-12-01

Full Text Available The plant growth-promoting rhizobacterium Pseudomonas aeruginosa strain IE-6 was tested for antagonistic activity towards Meloidogyne javanica, the root-knot nematode and soilbome root-infecting fungi viz., Macrophomina phaseolina, Fusarium solani and Rhizoctonia solani under laboratory and greenhouse conditions. Cell-free culture filtrate of the bacterium caused significant reduction in egg hatching of M.javanica and inhibited radial growth of fungi in vitro. Cell-free culture filtrate also caused lyses in mycelium of F.solani. Under greenhouse conditions, soil drenches with the aqueous cell suspension or cell-free culture resulted in a considerable reduction in nematode population densities in soil and subsequent root-knot development due to M.javanica. In addition to nematode control, rhizobacterium application also inhibited root-infection caused by soilborne root~infecting fungi with significant enhancement of growth of tomato seedlings.

First report of the root-knot nematode Meloidogyne minor on turfgrass in Belgium

NARCIS (Netherlands)

Viaene, N.; Wiseborn, D.B.; Karssen, G.

2007-01-01

The root-knot nematode, Meloidogyne minor, was described during 2004 after it was found on potato roots in a field in the Netherlands and in golf courses in England, Wales, and Ireland (2). Since it is associated with yellow patch disease in turf grass and causes deformation of potato tubers (2), it

Light and decapitation effects on in vitro rooting in maize root segments.

Science.gov (United States)

Golaz, F W; Pilet, P E

1985-10-01

The effects of white light and decapitation on the initiation and subsequent emergence and elongation of lateral roots of apical maize (Zea mays L. cv LG 11) root segments have been examined. The formation of lateral root primordium was inhibited by the white light. This inhibition did not depend upon the presence of the primary root tip. However, root decapitation induced a shift of the site of appearance of the most apical primordium towards the root apex, and a strong disturbance of the distribution pattern of primordium volumes along the root axis. White light had a significant effect neither on the distribution pattern of primordium volumes, nor on the period of primordium development (time interval required for the smallest detectable primordia to grow out as secondary roots). Thus, considering the rooting initiation and emergence, the light effect was restricted to the initiation phase only. Moreover, white light reduced lateral root elongation as well as primary root growth.

Regional Aggressive Root Resorption Caused by Neuronal Virus Infection

Directory of Open Access Journals (Sweden)

Inger Kjær

2012-01-01

Full Text Available During orthodontic treatment, root resorption can occur unexplainably. No clear distinction has been made between resorption located within specific regions and resorption occurring generally in the dentition. The purpose is to present cases with idiopathic (of unknown origin root resorption occurring regionally. Two cases of female patients, 26 and 28 years old, referred with aggressive root resorption were investigated clinically and radiographically. Anamnestic information revealed severe virus diseases during childhood, meningitis in one case and whooping cough in the other. One of the patients was treated with dental implants. Virus spreading along nerve paths is a possible explanation for the unexpected resorptions. In both cases, the resorptions began cervically. The extent of the resorption processes in the dentition followed the virus infected nerve paths and the resorption process stopped when reaching regions that were innervated differently and not infected by virus. In one case, histological examination revealed multinuclear dentinoclasts. The pattern of resorption in the two cases indicates that innervation is a factor, which under normal conditions may protect the root surface against resorption. Therefore, the normal nerve pattern is important for diagnostics and for predicting the course of severe unexpected root resorption.

Root canal irrigants

OpenAIRE

Kandaswamy, Deivanayagam; Venkateshbabu, Nagendrababu

2010-01-01

Successful root canal therapy relies on the combination of proper instrumentation, irrigation, and obturation of the root canal. Of these three essential steps of root canal therapy, irrigation of the root canal is the most important determinant in the healing of the periapical tissues. The primary endodontic treatment goal must thus be to optimize root canal disinfection and to prevent reinfection. In this review of the literature, various irrigants and the interactions between irrigants are...

First report of root rot of cowpea caused by Fusarium equiseti in Georgia in the United States

Science.gov (United States)

Root rot was observed on cowpea in Tift County, Georgia, in May of 2015. The disease occurred on approximately 10% of cowpea plants in 2 fields (2 ha). Symptoms appeared as sunken reddish brown lesions on roots and stems under the soil line, secondary roots became dark brown and rotted, and infected...

Light as stress factor to plant roots – case of root halotropism

Science.gov (United States)

Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

2014-01-01

Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives. PMID:25566292

Surgical management of aortic root disease in Marfan syndrome: a systematic review and meta-analysis.

Science.gov (United States)

Benedetto, Umberto; Melina, Giovanni; Takkenberg, Johanna J M; Roscitano, Antonino; Angeloni, Emiliano; Sinatra, Riccardo

2011-06-01

Surgical treatment of aortic root aneurysm in Marfan syndrome (MFS) patients. To compare results of total root replacement versus valve-sparing aortic root replacement in MFS patients. PubMed, Embase and Cochrane library were searched from January 1966 until February 2010 looking for papers reporting on aortic root operations in MFS patients. 530 studies were retrieved. Finally, 11 publications were enrolled. Inclusion criteria were observational studies reporting valve-related morbidity and mortality after total root replacement (TTR) and/or valve-sparing root replacement (VSRR) in patients with MFS and study size n≥30, reflecting the centre's experience. Data obtained from papers reporting both TRR and VSRR cohorts were analysed separately. In case of multiple publications, the most recent and complete report was selected. If the total number of patient-years was not provided, we calculated it by multiplying the number of hospital survivors with the mean follow-up duration of that study. Overall, 1,385 patients were analysed (972 patients had TTR and 413 patients had VSRR). Reintervention rate was 0.3%/year (95% CI 0.1 to 0.5) versus 1.3%/year (95% CI 0.3 to 2.2) (p=0.02) and thromboembolic events rate was 0.7%/year (95% CI 0.5 to 0.9) versus 0.3%/year (95% CI 0.1 to 0.6) (p=0.01) after TRR and VSRR, respectively. When composite valve-related events were compared, no difference existed between the two surgical strategies (p=0.41). Among patients undergoing VSRR, reimplantation was associated with a reduced rate of reintervention compared with remodelling (0.7%/year vs 2.4%/year, p=0.02). VSRR may represent a valuable option for patients with MFS with aortic aneurysm. However, this technique should be used with caution in patients with valve characteristics at risk for decreased durability.

Sorghum root-system classification in contrasting P environments reveals three main rooting types and root-architecture-related marker-trait associations.

Science.gov (United States)

Parra-Londono, Sebastian; Kavka, Mareike; Samans, Birgit; Snowdon, Rod; Wieckhorst, Silke; Uptmoor, Ralf

2018-02-12

Roots facilitate acquisition of macro- and micronutrients, which are crucial for plant productivity and anchorage in the soil. Phosphorus (P) is rapidly immobilized in the soil and hardly available for plants. Adaptation to P scarcity relies on changes in root morphology towards rooting systems well suited for topsoil foraging. Root-system architecture (RSA) defines the spatial organization of the network comprising primary, lateral and stem-derived roots and is important for adaptation to stress conditions. RSA phenotyping is a challenging task and essential for understanding root development. In this study, 19 traits describing RSA were analysed in a diversity panel comprising 194 sorghum genotypes, fingerprinted with a 90-k single-nucleotide polymorphism (SNP) array and grown under low and high P availability. Multivariate analysis was conducted and revealed three different RSA types: (1) a small root system; (2) a compact and bushy rooting type; and (3) an exploratory root system, which might benefit plant growth and development if water, nitrogen (N) or P availability is limited. While several genotypes displayed similar rooting types in different environments, others responded to P scarcity positively by developing more exploratory root systems, or negatively with root growth suppression. Genome-wide association studies revealed significant quantitative trait loci (P root-system development on chromosomes SBI-02 and SBI-03. Sorghum genotypes with a compact, bushy and shallow root system provide potential adaptation to P scarcity in the field by allowing thorough topsoil foraging, while genotypes with an exploratory root system may be advantageous if N or water is the limiting factor, although such genotypes showed highest P uptake levels under the artificial conditions of the present study. © The Author(s) 2018. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Psoralen production in hairy roots and adventitious roots cultures of Psoralea coryfolia.

Science.gov (United States)

Baskaran, P; Jayabalan, N

2009-07-01

Psoralea corylifolia is an endangered plant producing various compounds of medical importance. Adventitious roots and hairy roots were induced in cultures prepared from hypocotyl explants. Psoralen content was evaluated in both root types grown either in suspension cultures or on agar solidified medium. Psoralen content was approximately 3 mg g(-1) DW in suspension grown hairy roots being higher than in solid grown hairy roots and in solid and suspension-grown adventitious roots.

Nonsurgical management of horizontal root fracture associated external root resorption and internal root resorption

Directory of Open Access Journals (Sweden)

Shiraz Pasha

2016-01-01

Full Text Available Horizontal root fractures, which frequently affect the upper incisors, usually result from a frontal impact. As a result, combined injuries occur in dental tissues such as the pulp, dentin, cementum, periodontal ligament, and alveolar bone. Internal root canal inflammatory resorption involves a progressive loss of intraradicular dentin without adjunctive deposition of hard tissues adjacent to the resorptive sites. It is frequently associated with chronic pulpal inflammation, and bacteria might be identified from the granulation tissues when the lesion is progressive to the extent that it is identifiable with routine radiographs. With the advancement in technology, it is imperative to use modern diagnostic tools such as cone beam computed tomography and radiovisuography to diagnose and confirm the presence and extent of resorptions and fractures and their exact location. This case report presents a rare case having internal root resorption and horizontal root fracture with external inflammatory root resorption both which were treated successfully following guidelines by International Association of Dental Traumatology by nonsurgical treatment with 1 year follow-up.

ROOT Reference Documentation

CERN Document Server

Fuakye, Eric Gyabeng

2017-01-01

A ROOT Reference Documentation has been implemented to generate all the lists of libraries needed for each ROOT class. Doxygen has no option to generate or add the lists of libraries for each ROOT class. Therefore shell scripting and a basic C++ program was employed to import the lists of libraries needed by each ROOT class.

Suppression of crown and root rot of wheat by the rhizobacterium Paenibacillus polymyxa

Directory of Open Access Journals (Sweden)

Lamia LOUNACI

2017-01-01

Full Text Available A seedling bioassay was developed for screening a wheat root-associated rhizobacterial strain of Paenibacillus polymyxa for ability to suppress crown and root rot pathogens of wheat. The primary aim was to evaluate the ability of P. polymyxa to suppress Fusarium graminearum, F. culmorum, F. verticillioides and Microdochium nivale, the fungal pathogens responsible for Fusarium crown and root rot and head blight of wheat in Algeria. Bioassays conducted under controlled conditions indicated that seed treatments with P. polymyxa strain SGK2 significantly reduced disease symptoms caused by all four fungal pathogens. Plant growth promotion (increased shoot and root dry weights, however, depended on the pathogen tested. Our results indicate that seed treatments with a biocontrol agent could be an additional strategy for management of wheat crown and root rot pathogens.

X-ray computed tomography uncovers root-root interactions: quantifying spatial relationships between interacting root systems in three dimensions.

Science.gov (United States)

Paya, Alexander M; Silverberg, Jesse L; Padgett, Jennifer; Bauerle, Taryn L

2015-01-01

Research in the field of plant biology has recently demonstrated that inter- and intra-specific interactions belowground can dramatically alter root growth. Our aim was to answer questions related to the effect of inter- vs. intra-specific interactions on the growth and utilization of undisturbed space by fine roots within three dimensions (3D) using micro X-ray computed tomography. To achieve this, Populus tremuloides (quaking aspen) and Picea mariana (black spruce) seedlings were planted into containers as either solitary individuals, or inter-/intra-specific pairs, allowed to grow for 2 months, and 3D metrics developed in order to quantify their use of belowground space. In both aspen and spruce, inter-specific root interactions produced a shift in the vertical distribution of the root system volume, and deepened the average position of root tips when compared to intra-specifically growing seedlings. Inter-specific interactions also increased the minimum distance between root tips belonging to the same root system. There was no effect of belowground interactions on the radial distribution of roots, or the directionality of lateral root growth for either species. In conclusion, we found that significant differences were observed more often when comparing controls (solitary individuals) and paired seedlings (inter- or intra-specific), than when comparing inter- and intra-specifically growing seedlings. This would indicate that competition between neighboring seedlings was more responsible for shifting fine root growth in both species than was neighbor identity. However, significant inter- vs. intra-specific differences were observed, which further emphasizes the importance of biological interactions in competition studies.

Root hairs aid soil penetration by anchoring the root surface to pore walls.

Science.gov (United States)

Bengough, A Glyn; Loades, Kenneth; McKenzie, Blair M

2016-02-01

The physical role of root hairs in anchoring the root tip during soil penetration was examined. Experiments using a hairless maize mutant (Zea mays: rth3-3) and its wild-type counterpart measured the anchorage force between the primary root of maize and the soil to determine whether root hairs enabled seedling roots in artificial biopores to penetrate sandy loam soil (dry bulk density 1.0-1.5g cm(-3)). Time-lapse imaging was used to analyse root and seedling displacements in soil adjacent to a transparent Perspex interface. Peak anchorage forces were up to five times greater (2.5N cf. 0.5N) for wild-type roots than for hairless mutants in 1.2g cm(-3) soil. Root hair anchorage enabled better soil penetration for 1.0 or 1.2g cm(-3) soil, but there was no significant advantage of root hairs in the densest soil (1.5g cm(-3)). The anchorage force was insufficient to allow root penetration of the denser soil, probably because of less root hair penetration into pore walls and, consequently, poorer adhesion between the root hairs and the pore walls. Hairless seedlings took 33h to anchor themselves compared with 16h for wild-type roots in 1.2g cm(-3) soil. Caryopses were often pushed several millimetres out of the soil before the roots became anchored and hairless roots often never became anchored securely.The physical role of root hairs in anchoring the root tip may be important in loose seed beds above more compact soil layers and may also assist root tips to emerge from biopores and penetrate the bulk soil. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Measurements of water uptake of maize roots: the key function of lateral roots

Science.gov (United States)

Ahmed, M. A.; Zarebanadkouki, M.; Kroener, E.; Kaestner, A.; Carminati, A.

2014-12-01

Maize (Zea mays L.) is one of the most important crop worldwide. Despite its importance, there is limited information on the function of different root segments and root types of maize in extracting water from soils. Therefore, the aim of this study was to investigate locations of root water uptake in maize. We used neutron radiography to: 1) image the spatial distribution of maize roots in soil and 2) trace the transport of injected deuterated water (D2O) in soil and roots. Maizes were grown in aluminum containers (40×38×1 cm) filled with a sandy soil. When the plants were 16 days old, we injected D2O into selected soil regions containing primary, seminal and lateral roots. The experiments were performed during the day (transpiring plants) and night (not transpiring plants). The transport of D2O into roots was simulated using a new convection-diffusion numerical model of D2O transport into roots. By fitting the observed D2O transport we quantified the diffusional permeability and the water uptake of the different root segments. The maize root architecture consisted of a primary root, 4-5 seminal roots and many lateral roots connected to the primary and seminal roots. Laterals emerged from the proximal 15 cm of the primary and seminal roots. Water uptake occurred primarily in lateral roots. Lateral roots had the highest diffusional permeability (9.4×10-7), which was around six times higher that the diffusional permeability of the old seminal segments (1.4×10-7), and two times higher than the diffusional permeability of the young seminal segments (4.7×10-7). The radial flow of D2O into the lateral (6.7×10-5 ) was much higher than in the young seminal roots (1.1×10-12). The radial flow of D2O into the old seminal was negligible. We concluded that the function of the primary and seminal roots was to collect water from the lateral roots and transport it to the shoot. A maize root system with lateral roots branching from deep primary and seminal roots would be

Effects of Tomato Root Exudates on Meloidogyne incognita.

Directory of Open Access Journals (Sweden)

Guodong Yang

Full Text Available Plant root exudates affect root-knot nematodes egg hatch. Chemicals in root exudates can attract nematodes to the roots or result in repellence, motility inhibition or even death. However, until recently little was known about the relationship between tomato root exudates chemicals and root-knot nematodes. In this study, root exudates were extracted from three tomato rootstocks with varying levels of nematode resistance: Baliya (highly resistant, HR, RS2 (moderately resistant, MR and L-402 (highly susceptible, T. The effects of the root exudates on Meloidogyne incognita (M. incognita egg hatch, survival and chemotaxis of second-stage juveniles (J2 were explored. The composition of the root exudates was analysed by gas chromatography/mass spectrometry (GC/MS prior to and following M. incognita inoculation. Four compounds in root exudates were selected for further analysis and their allopathic effect on M. incognita were investigated. Root exudates from each tomato rootstocks (HR, MR and T strains suppressed M. incognita egg hatch and increased J2 mortality, with the highest rate being observed in the exudates from the HR plants. Exudate from HR variety also repelled M. incognita J2 while that of the susceptible plant, T, was demonstrated to be attractive. The relative amount of esters and phenol compounds in root exudates from HR and MR tomato rootstocks increased notably after inoculation. Four compounds, 2,6-Di-tert-butyl-p-cresol, L-ascorbyl 2,6-dipalmitate, dibutyl phthalate and dimethyl phthalate increased significantly after inoculation. The egg hatch of M. incognita was suppressed by each of the compound. L-ascorbyl 2,6-dipalmitate showed the most notable effect in a concentration-dependent manner. All four compounds were associated with increased J2 mortality. The greatest effect was observed with dimethyl phthalate at 2 mmol·L-1. Dibutyl phthalate was the only compound observed to repel M. incognita J2 with no effect being detected in

Using airborne imagery to monitor cotton root rot infection before and after fungicide treatment

Science.gov (United States)

Cotton root rot is a severe soilborne disease that has affected cotton production for over a century. Recent research has shown that a commercial fungicide, flutriafol, has potential for the control of this disease. To effectively and economically control this disease, it is necessary to identify in...

Conjoined lumbosacral nerve roots

International Nuclear Information System (INIS)

Kyoshima, Kazumitsu; Nishiura, Iwao; Koyama, Tsunemaro

1986-01-01

Several kinds of the lumbosacral nerve root anomalies have already been recognized, and the conjoined nerve roots is the most common among them. It does not make symptoms by itself, but if there is a causation of neural entrapment, for example, disc herniation, lateral recessus stenosis, spondylolisthesis, etc., so called ''biradicular syndrome'' should occur. Anomalies of the lumbosacral nerve roots, if not properly recognized, may lead to injury of these nerves during operation of the lumbar spine. Recently, the chance of finding these anomalous roots has been increased more and more with the use of metrizamide myelography and metrizamide CT, because of the improvement of the opacification of nerve roots. We describe the findings of the anomalous roots as revealed by these two methods. They demonstrate two nerve roots running parallel and the asymmetrical wide root sleeve. Under such circumstances, it is important to distinguish the anomalous roots from the normal ventral and dorsal roots. (author)

IAA transport in corn roots includes the root cap

International Nuclear Information System (INIS)

Hasenstein, K.H.

1989-01-01

In earlier reports we concluded that auxin is the growth regulator that controls gravicurvature in roots and that the redistribution of auxin occurs within the root cap. Since other reports did not detect auxin in the root cap, we attempted to confirm the IAA does move through the cap. Agar blocks containing 3 H-IAA were applied to the cut surface of 5 mm long apical segments of primary roots of corn (mo17xB73). After 30 to 120 min radioactivity (RA) of the cap and root tissue was determined. While segments suspended in water-saturated air accumulated very little RA in the cap, application of 0.5 μ1 of dist. water to the cap (=controls) increased RA of the cap dramatically. Application to the cap of 0.5 μ1 of sorbitol or the Ca 2+ chelator EGTA reduced cap RA to 46% and 70% respectively compared to water, without affecting uptake. Control root segments gravireacted faster than non-treated or osmoticum or EGTA treated segments. The data indicate that both the degree of hydration and calcium control the amount of auxin moving through the cap

Root anatomical phenes predict root penetration ability and biomechanical properties in maize (Zea Mays)

OpenAIRE

Chimungu, Joseph G.; Loades, Kenneth W.; Lynch, Jonathan P.

2015-01-01

The ability of roots to penetrate hard soil is important for crop productivity but specific root phenes contributing to this ability are poorly understood. Root penetrability and biomechanical properties are likely to vary in the root system dependent on anatomical structure. No information is available to date on the influence of root anatomical phenes on root penetrability and biomechanics. Root penetration ability was evaluated using a wax layer system. Root tensile and bending strength we...

GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems

Science.gov (United States)

Rellán-Álvarez, Rubén; Lobet, Guillaume; Lindner, Heike; Pradier, Pierre-Luc; Sebastian, Jose; Yee, Muh-Ching; Geng, Yu; Trontin, Charlotte; LaRue, Therese; Schrager-Lavelle, Amanda; Haney, Cara H; Nieu, Rita; Maloof, Julin; Vogel, John P; Dinneny, José R

2015-01-01

Root systems develop different root types that individually sense cues from their local environment and integrate this information with systemic signals. This complex multi-dimensional amalgam of inputs enables continuous adjustment of root growth rates, direction, and metabolic activity that define a dynamic physical network. Current methods for analyzing root biology balance physiological relevance with imaging capability. To bridge this divide, we developed an integrated-imaging system called Growth and Luminescence Observatory for Roots (GLO-Roots) that uses luminescence-based reporters to enable studies of root architecture and gene expression patterns in soil-grown, light-shielded roots. We have developed image analysis algorithms that allow the spatial integration of soil properties, gene expression, and root system architecture traits. We propose GLO-Roots as a system that has great utility in presenting environmental stimuli to roots in ways that evoke natural adaptive responses and in providing tools for studying the multi-dimensional nature of such processes. DOI: http://dx.doi.org/10.7554/eLife.07597.001 PMID:26287479

ROOT.NET: Using ROOT from .NET languages like C# and F#

Science.gov (United States)

Watts, G.

2012-12-01

ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F# (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

ROOT.NET: Using ROOT from .NET languages like C and F

International Nuclear Information System (INIS)

Watts, G

2012-01-01

ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

Valve-sparing aortic root replacement†.

Science.gov (United States)

Koolbergen, David R; Manshanden, Johan S J; Bouma, Berto J; Blom, Nico A; Mulder, Barbara J M; de Mol, Bas A J M; Hazekamp, Mark G

2015-02-01

To evaluate our results of valve-sparing aortic root replacement and associated (multiple) valve repair. From September 2003 to September 2013, 97 patients had valve-sparing aortic root replacement procedures. Patient records and preoperative, postoperative and recent echocardiograms were reviewed. Median age was 40.3 (range: 13.4-68.6) years and 67 (69.1%) were male. Seven (7.2%) patients were younger than 18 years, the youngest being 13.4 years. Fifty-four (55.7%) had Marfan syndrome, 2 (2.1%) other fibrous tissue diseases, 15 (15.5%) bicuspid aortic valve and 3 (3.1%) had earlier Fallot repair. The reimplantation technique was used in all, with a straight vascular prosthesis in 11 (26-34 mm) and the Valsalva prosthesis in 86 (26-32 mm). Concomitant aortic valve repair was performed in 43 (44.3%), mitral valve repair in 10 (10.3%), tricuspid valve repair in 5 (5.2%) and aortic arch replacement in 3 (3.1%). Mean follow-up was 4.2 ± 2.4 years. Follow-up was complete in all. One 14-year old patient died 1.3 years post-surgery presumably of ventricular arrhythmia. One patient underwent reoperation for aneurysm of the proximal right coronary artery after 4.9 years and 4 patients required aortic valve replacement, 3 of which because of endocarditis after 0.1, 0.8 and 1.3 years and 1 because of cusp prolapse after 3.8 years. No thrombo-embolic complications occurred. Mortality, root reoperation and aortic regurgitation were absent in 88.0 ± 0.5% at 5-year follow-up. Results of valve-sparing root replacement are good, even in association with a high incidence of concomitant valve repair. Valve-sparing aortic root replacement can be performed at a very young age as long as an adult size prosthesis can be implanted. © The Author 2014. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

Biological control of corky root in tomato.

Science.gov (United States)

Fiume, G; Fiume, F

2008-01-01

Corky root caused by Pyrenochaeta lycopersici (Schneider et Gerlach) is one of the most important soil borne fungal pathogens which develops in the soils, causing diseases in different crops. The research was carried out to evaluate the effectiveness of the biological control of corky root on tomato. Biological control was performed by using Trichoderma viride Pers. 18/17 SS, Streptomyces spp. AtB42 and Bacillus subtilis M51 PI. According to present and future regulations on the use of chemical fungicides and considering that treatments must avoids environmental pollution, the main object of this research was to find alternative strategies by using biocontrol agents against P. lycopersici that affect tomato plants. In laboratory, the effectiveness of T. viride 18/17 SS, Streptomyces spp. AtB42 and B. subtilis M51 PI to control P. lycopersici were studied. In greenhouse, the research was carried out comparing the following treatments: 1) untreated control; 2) T. viride 18/17 SS; 3) Streptomyces spp. AtB42; 4) B. subtilis M51 PI. Roots of plants of tomato H3028 Hazera were treated with the antagonist suspensions just prior of transplant. Treatments were repeated about 2 months after, with the same suspensions sprayed on the soil to the plant collar. In dual culture, the inhibition of P. lycopersici ranged up to 81.2% (caused from T. viride 18/17 SS), 75.6% (from Streptomyces spp. AtB42) and 66.8% (from B. subtilis M51 PI). In greenhouse trials, with regard to corky root symptoms, all treated plots showed signifycative differences compared to untreated. T. viride gave the better results followed by Streptomyces spp. and then by B. subtilis. The fungus antagonist showed good root surface competence such as demonstrated its persistence on the roots surface of the tomato plants whose roots were treated with T. viride 18/17 SS up to 2 months before.

Locally Finite Root Supersystems

OpenAIRE

Yousofzadeh, Malihe

2013-01-01

We introduce the notion of locally finite root supersystems as a generalization of both locally finite root systems and generalized root systems. We classify irreducible locally finite root supersystems.

Investigation of the Fusarium virguliforme Transcriptomes Induced during Infection of Soybean Roots Suggests that Enzymes with Hydrolytic Activities Could Play a Major Role in Root Necrosis.

Science.gov (United States)

Sahu, Binod B; Baumbach, Jordan L; Singh, Prashant; Srivastava, Subodh K; Yi, Xiaoping; Bhattacharyya, Madan K

2017-01-01

Sudden death syndrome (SDS) is caused by the fungal pathogen, Fusarium virguliforme, and is a major threat to soybean production in North America. There are two major components of this disease: (i) root necrosis and (ii) foliar SDS. Root symptoms consist of root necrosis with vascular discoloration. Foliar SDS is characterized by interveinal chlorosis and leaf necrosis, and in severe cases by flower and pod abscission. A major toxin involved in initiating foliar SDS has been identified. Nothing is known about how root necrosis develops. In order to unravel the mechanisms used by the pathogen to cause root necrosis, the transcriptome of the pathogen in infected soybean root tissues of a susceptible cultivar, 'Essex', was investigated. The transcriptomes of the germinating conidia and mycelia were also examined. Of the 14,845 predicted F. virguliforme genes, we observed that 12,017 (81%) were expressed in germinating conidia and 12,208 (82%) in mycelia and 10,626 (72%) in infected soybean roots. Of the 10,626 genes induced in infected roots, 224 were transcribed only following infection. Expression of several infection-induced genes encoding enzymes with oxidation-reduction properties suggests that degradation of antimicrobial compounds such as the phytoalexin, glyceollin, could be important in early stages of the root tissue infection. Enzymes with hydrolytic and catalytic activities could play an important role in establishing the necrotrophic phase. The expression of a large number of genes encoding enzymes with catalytic and hydrolytic activities during the late infection stages suggests that cell wall degradation could be involved in root necrosis and the establishment of the necrotrophic phase in this pathogen.

Descendant root volume varies as a function of root type: estimation of root biomass lost during uprooting in Pinus pinaster

OpenAIRE

Danjon, Frédéric; Caplan, Joshua S.; Fortin, Mathieu; Meredieu, Céline

2013-01-01

Root systems of woody plants generally display a strong relationship between the cross-sectional area or cross-sectional diameter (CSD) of a root and the dry weight of biomass (DWd) or root volume (Vd) that has grown (i.e., is descendent) from a point. Specification of this relationship allows one to quantify root architectural patterns and estimate the amount of material lost when root systems are extracted from the soil. However, specifications of this relationship generally do not account ...

Roots & Hollers

OpenAIRE

Kollman, Patrick L; Gorman, Thomas A

2011-01-01

Roots & Hollers, 2011 A documentary by Thomas Gorman & Patrick Kollman Master’s Project Abstract: Roots & Hollers uncovers the wild American ginseng trade, revealing a unique intersection between Asia and rural America. Legendary in Asia for its healing powers, ginseng helps sustain the livelihoods of thousands in Appalachia. A single root can sell for thousands of dollars at auction. Shot on-location in the mountains of Kentucky and West Virginia, this student doc...

Characterization of Pearl Millet Root Architecture and Anatomy Reveals Three Types of Lateral Roots

Science.gov (United States)

Passot, Sixtine; Gnacko, Fatoumata; Moukouanga, Daniel; Lucas, Mikaël; Guyomarc’h, Soazig; Ortega, Beatriz Moreno; Atkinson, Jonathan A.; Belko, Marème N.; Bennett, Malcolm J.; Gantet, Pascal; Wells, Darren M.; Guédon, Yann; Vigouroux, Yves; Verdeil, Jean-Luc; Muller, Bertrand; Laplaze, Laurent

2016-01-01

Pearl millet plays an important role for food security in arid regions of Africa and India. Nevertheless, it is considered an orphan crop as it lags far behind other cereals in terms of genetic improvement efforts. Breeding pearl millet varieties with improved root traits promises to deliver benefits in water and nutrient acquisition. Here, we characterize early pearl millet root system development using several different root phenotyping approaches that include rhizotrons and microCT. We report that early stage pearl millet root system development is characterized by a fast growing primary root that quickly colonizes deeper soil horizons. We also describe root anatomical studies that revealed three distinct types of lateral roots that form on both primary roots and crown roots. Finally, we detected significant variation for two root architectural traits, primary root lenght and lateral root density, in pearl millet inbred lines. This study provides the basis for subsequent genetic experiments to identify loci associated with interesting early root development traits in this important cereal. PMID:27379124

Hypocotyl adventitious root organogenesis differs from lateral root development.

Science.gov (United States)

Verstraeten, Inge; Schotte, Sébastien; Geelen, Danny

2014-01-01

Wound-induced adventitious root (AR) formation is a requirement for plant survival upon root damage inflicted by pathogen attack, but also during the regeneration of plant stem cuttings for clonal propagation of elite plant varieties. Yet, adventitious rooting also takes place without wounding. This happens for example in etiolated Arabidopsis thaliana hypocotyls, in which AR initiate upon de-etiolation or in tomato seedlings, in which AR initiate upon flooding or high water availability. In the hypocotyl AR originate from a cell layer reminiscent to the pericycle in the primary root (PR) and the initiated AR share histological and developmental characteristics with lateral roots (LRs). In contrast to the PR however, the hypocotyl is a determinate structure with an established final number of cells. This points to differences between the induction of hypocotyl AR and LR on the PR, as the latter grows indeterminately. The induction of AR on the hypocotyl takes place in environmental conditions that differ from those that control LR formation. Hence, AR formation depends on differentially regulated gene products. Similarly to AR induction in stem cuttings, the capacity to induce hypocotyl AR is genotype-dependent and the plant growth regulator auxin is a key regulator controlling the rooting response. The hormones cytokinins, ethylene, jasmonic acid, and strigolactones in general reduce the root-inducing capacity. The involvement of this many regulators indicates that a tight control and fine-tuning of the initiation and emergence of AR exists. Recently, several genetic factors, specific to hypocotyl adventitious rooting in A. thaliana, have been uncovered. These factors reveal a dedicated signaling network that drives AR formation in the Arabidopsis hypocotyl. Here we provide an overview of the environmental and genetic factors controlling hypocotyl-born AR and we summarize how AR formation and the regulating factors of this organogenesis are distinct from LR

Hypocotyl adventitious root organogenesis differs from lateral root development

Directory of Open Access Journals (Sweden)

Inge eVerstraeten

2014-09-01

Full Text Available Wound-induced adventitious root (AR formation is a requirement for plant survival upon root damage inflicted by pathogen attack, but also during the regeneration of plant stem cuttings for clonal propagation of elite plant varieties. Yet, adventitious rooting also takes place without wounding. This happens for example in etiolated Arabidopsis thaliana hypocotyls, in which AR initiate upon de-etiolation or in tomato seedlings, in which AR initiate upon flooding or high water availability. In the hypocotyl AR originate from a cell layer reminiscent to the pericycle in the primary root (PR and the initiated AR share histological and developmental characteristics with lateral roots (LR. In contrast to the PR however, the hypocotyl is a determinate structure with an established final number of cells. This points to differences between the induction of hypocotyl AR and LR on the PR, as the latter grows indeterminately. The induction of AR on the hypocotyl takes place in environmental conditions that differ from those that control LR formation. Hence, AR formation depends on differentially regulated gene products. Similarly to AR induction in stem cuttings, the capacity to induce hypocotyl AR is genotype-dependent and the plant growth regulator auxin is a key regulator controlling the rooting response. The hormones cytokinins, ethylene, jasmonic acid and strigolactones in general reduce the root-inducing capacity. The involvement of this many regulators indicates that a tight control and fine-tuning of the initiation and emergence of AR exists. Recently, several genetic factors, specific to hypocotyl adventitious rooting in Arabidopsis thaliana, have been uncovered. These factors reveal a dedicated signaling network that drives AR formation in the Arabidopsis hypocotyl. Here we provide an overview of the environmental and genetic factors controlling hypocotyl-born AR and we summarize how AR formation and the regulating factors of this organogenesis are

ROOT I/O in Javascript - Reading ROOT files in a browser

CERN Multimedia

CERN. Geneva

2012-01-01

A JavaScript version of the ROOT I/O subsystem is being developed, in order to be able to browse (inspect) ROOT files in a platform independent way. This allows the content of ROOT files to be displayed in most web browsers, without having to install ROOT or any other software on the server or on the client. This gives a direct access to ROOT files from new (e.g. portable) devices in a light way. It will be possible to display simple graphical objects such as histograms and graphs (TH1, TH2, TH3, TProfile, TGraph, ...). The rendering will first be done with an external JavaScript graphic library, before investigating a way to produce graphics closer to what ROOT supports on other platforms (X11, Windows).

Root infection of sugar beet by Cercospora beticola in a climate chamber and in the field

NARCIS (Netherlands)

Vereijssen, J.; Schneider, J.H.M.; Termorshuizen, A.J.

2005-01-01

Sugar beet root infection by Cercospora beticola, the causal agent of Cercospora leaf spot (CLS), was studied in a climate chamber and in the field. In the climate chamber, root incubation of susceptible seedlings with a conidial suspension resulted in disease incidences that were significantly

Anatomic investigation of the lumbosacral nerve roots and dorsal root ganglia by MRI

International Nuclear Information System (INIS)

Hasegawa, Toru; Fuse, Kenzo; Mikawa, Yoshihiro; Watanabe, Ryo

1995-01-01

The morphology of the lumbosacral nerve roots and dorsal root ganglia (DRG) was examined by using magnetic resonance imaging (MRI) in 11 healthy male volunteers aged 20-40 years. One hundred and twenty-three nerve roots (15 at the L1 level, 22 each at the L2-L5 levels, and 20 at the S1 level) were examined in terms of the position and angle of the bifurcation of the nerve roots, length of the nerve root, and the position and width of DRG. The nerve roots at the lower levels showed more cephalad position and smaller angle of bifurcation on MRI. The distance from the bifurcation of nerve roots to the cephalad edge of DRG was significantly longer in the upper root levels and was significantly shorter in the L5 roots than the S1 roots. The positions of DRG at the S1 level tended to become cephalad. DRG that was positioned toward more caudal direction was larger and more elliptic. MRI provided useful information concerning morphology and anatomical position of nerve roots and DRG, thereby allowing accurate diagnosis and the determination of surgical indications. (N.K.)

Comparative assessment of fluorosed and nonfluorosed fibroblast attachment on fluorosed and nonfluorosed teeth after scaling and root planning and ethylenediaminetetraacetic acid root biomodification

Directory of Open Access Journals (Sweden)

Kharidi Laxman Vandana

2014-01-01

Full Text Available Background and Objectives: Fluorosis causes mineralization changes in the tooth and can lead to morphological alterations of fibroblasts. To evaluate the effect of fluorosis on periodontal healing, the initial step while healing such as, fibroblast attachment onto the root surface requires to be evaluated on the fluorosed and nonfluorosed tooth using nonfluorosed as well as fluorosed fibroblasts originated from the subjects influenced by high-water fluoride. Hence, the objective of the current study was to study and compare the attachment of nonfluorosed and fluorosed fibroblasts on the fluorosed and nonfluorosed root fragments. Materials and Methods: A total of 112 fluorosed and nonfluorosed, periodontally healthy and diseased tooth roots were obtained and allotted to eight groups : f0 luorosed healthy (FH and non-FH (NFH controls, fluorosed diseased (FD and non-FD (NFD controls, fluorosed and nonfluorosed teeth treated with scaling and root planning (SRP (FD SRP and NFD SRP and similar groups treated with SRP and ethylenediaminetetraacetic acid (EDTA (FD SRP + EDTA and NFD SRP + EDTA burnishing treatment with 24% EDTA gel for 2 min. After the respective treatment half of the root fragments in each group were incubated in the human periodontal ligament fibroblast cells obtained and cultured from freshly extracted FH and NFH human premolar tooth root. The nonfluorosed fibroblasts are elongated, flat cells thus they show increased attachment to root the surface. Results: When comparison was carried out between the attachment of fluorosed and nonfluorosed fibroblasts on NFD groups treated with scaling and EDTA, significant results were obtained with increased attachment seen on the group incubated with nonfluorosed fibroblasts (P = 0.029. While on comparison between the attachment of fluorosed and nonfluorosed fibroblasts on NFH group, NFD group treated with SRP and NFD group, no significant results were obtained (P > 0.05. On comparison between

Molecular systematics of the cotton root rot pathogen, Phymatotrichopsis omnivora

NARCIS (Netherlands)

Marek, S.M.; Hansen, K.; Romanish, M.; Thorn, R.G.

2009-01-01

Cotton root rot is an important soilborne disease of cotton and numerous dicot plants in the south-western United States and Mexico. The causal organism, Phymatotrichopsis omnivora (= Phymatotrichum omnivorum), is known only as an asexual, holoanamorphic (mitosporic) fungus, and produces conidia

Submergence of Roots for Alveolar Bone Preservation. I. Endodontically Treated Roots.

Science.gov (United States)

1977-05-10

With Endodontic Submerged Roots Scale 0 1 2 3 Periapical 15 0 1 0 Pericoronal 7 3 3 3 (3 cysts ) = 1 _ _ _ _ _ _ _ _ _ = REFERENCES 1. Lam, R.: Contour...with coronal portions of the roots. These epithe lial-lined cysts prevented the formation of osteo- cementum over the coronal surface . In this study...the endodontically treated roots appeared to be primarily a response to the excess root cana l sealer that was expressed coronally and periapically

Effects of AMF- and PGPR-root inoculation and a foliar chitosan spray in single and combined treatments on powdery mildew disease in strawberry

Directory of Open Access Journals (Sweden)

Aiofe Lowe

2012-03-01

Full Text Available Trials were carried out using, as a root inoculants, mixed Glomus spp. (G. mossae, G. caledonium, and G. fasiculatum and Bacillus subtilis FZB24, and the plant activator N, O-carboxymethyl chitosan applied as a foliar spray. The treatments were applied singly and in combinations, on strawberry plants grown out of season in a greenhouse.  Both fruit yield and runner production were reduced due to disease.  Several of the treatments were found to have significant effects, increasing fruit number and yield, and runner production.  Disease symptom severity was lowest in the B. subtilis FZB24 plus chitosan treatment. The treatments giving significantly higher fruit yield/number and runner production werea inoculation with B. subtilis FZB24, and with B. subtilis FZB24 or AMF combined with chitosan spray. These treatments and a fungicide treatment, gave the same level of disease control.

Influence of temperature and rooting-promoter on the formation of root-primodia and on the rooting of chrysanthemum cuttings under storage

International Nuclear Information System (INIS)

Nishio, J.; Fukuda, M.

1998-01-01

In order to promote rooting for direct planting cuttings in a lighting cultivation of chrysanthemum, we clarified the effects of light, temperature and term of storage of the cuttings, and analyzed ways of using rooting promoters as a pre-treatment of cuttings for root-primodia formation and rooting. Light as a pre-treatment had little effect, so it seemed to be not necessary for the formation of root primodia. The formation of the root-primodia was most hastened at 25 degrees C; inversely, it was slowed down at low temperatures, that is, the root-primodia were formed in four days at 25 degrees C, five days at 20 degrees C, and seven days at 15 degrees C. With the use of rooting promoters as a pre-treatment for the rooting of cuttings, the root-primodia were formed faster when the whole of cuttings were dipped in 40 mg/L solution of indelebutyric acid (IBA) than when the base of cuttings were dipped or sprayed 400 mg/L solution of IBA. It was appropriate that cuttings were dipped in IBA then put in in plastic-pots (7.5cm) vertically, packed in polyethylene-bags and stored in a corrugated carton box

Resistance to compression of weakened roots subjected to different root reconstruction protocols

Directory of Open Access Journals (Sweden)

Lucas Villaça Zogheib

2011-12-01

Full Text Available OBJECTIVE: This study evaluated, in vitro, the fracture resistance of human non-vital teeth restored with different reconstruction protocols. MATERIAL AND METHODS: Forty human anterior roots of similar shape and dimensions were assigned to four groups (n=10, according to the root reconstruction protocol: Group I (control: non-weakened roots with glass fiber post; Group II: roots with composite resin by incremental technique and glass fiber post; Group III: roots with accessory glass fiber posts and glass fiber post; and Group IV: roots with anatomic glass fiber post technique. Following post cementation and core reconstruction, the roots were embedded in chemically activated acrylic resin and submitted to fracture resistance testing, with a compressive load at an angle of 45º in relation to the long axis of the root at a speed of 0.5 mm/min until fracture. All data were statistically analyzed with bilateral Dunnett's test (α=0.05. RESULTS: Group I presented higher mean values of fracture resistance when compared with the three experimental groups, which, in turn, presented similar resistance to fracture among each other. None of the techniques of root reconstruction with intraradicular posts improved root strength, and the incremental technique was suggested as being the most recommendable, since the type of fracture that occurred allowed the remaining dental structure to be repaired. CONCLUSION: The results of this in vitro study suggest that the healthy remaining radicular dentin is more important to increase fracture resistance than the root reconstruction protocol.

Living roots effect on 14C-labelled root litter decomposition

International Nuclear Information System (INIS)

Billes, G.; Bottner, P.

1981-01-01

Wheat was 14 C-labelled by cultivation on soil in pots, from seedling to maturity, in a chamber with constant CO 2 and 14 CO 2 levels. The 14 C-distribution was constant amongst the aerial parts, the roots and the soil in the whole pots. After cutting the plant tops, the pots were dried without disturbing the soil and root system. The pots were then incubated under controlled humidity and temperature conditions for 62 days. In the same time a second wheat cultivation was grown on one half of the pots in normal atmosphere without plant cultivation. The purpose of the work is to study the effect of living roots on decomposition of the former 14 C labelled roots litter. The CO 2 and the 14 CO 2 released from the soil were continuously measured. On incubation days 0, 18, 33 and 62, the remaining litter was separated from soil, and the organic matter was fractionated by repeated hydrolysis and NaOH extraction. Root litter disappeared faster when living roots were present than in bare soil. The accumulation and mineralization rates of humified components in soil followed two stages. While the roots of second wheat cultivation grew actively (until earing), the strong acid hydrolysable components accumulated in larger amount than in the case of bare soil. After earing, while roots activity was depressed, these components were partly mineralized and the 14 CO 2 release was then higher with plants than with bare soil. The humification and mineralization rate were related with living plant phenology stages. (orig.)

Root resorption

DEFF Research Database (Denmark)

Kjaer, Inger

2014-01-01

Introduction: This paper summarizes the different conditions, which have a well-known influence on the resorption of tooth roots, exemplified by trauma and orthodontic treatment. The concept of the paper is to summarize and explain symptoms and signs of importance for avoiding resorption during...... orthodontic treatment. The Hypothesis: The hypothesis in this paper is that three different tissue layers covering the root in the so-called periroot sheet can explain signs and symptoms of importance for avoiding root resorption during orthodontic treatment. These different tissue layers are; outermost...... processes provoked by trauma and orthodontic pressure. Inflammatory reactions are followed by resorptive processes in the periroot sheet and along the root surface. Evaluation of the Hypothesis: Different morphologies in the dentition are signs of abnormal epithelium or an abnormal mesodermal layer. It has...

Evaluation of biocontrol potential of epiphytic fluorescent pseudomonas as associated with healthy fruits and vegetables against root rot and root knot pathogens of mungbean

International Nuclear Information System (INIS)

Habiba, A.; Noreen, R.; Ali, S. A.; Sultana, V.; Ara, J.

2016-01-01

Endophytic and rhizospheric fluorescent Pseudomonas have widely been used as biological control agents against soilborne plant pathogens. In this study, fifteen epiphytic fluorescent Pseudomonas isolated from the surfaces of citrus (grapefruit, orange and lemon) melon and tomato fruits were characterized for their in vitro activity against root rotting fungi viz., Macrophomina phaseolina, Fusarium solani, F. oxysporum and Rhizoctonia solani and nematicidal activity against the second stage juveniles of Meloidogyne javanica. Out of fifteen Pseudomonas isolates HAB-16, HAB-1 and HAB-25 inhibited the growth of all the test fungi and showed maximum nematicidal activity against second stage juvenile of M. javanica. Based on their effective in vitro activity nine epiphytic fluorescent Pseudomonas were evaluated for their growth promoting ability and biocontrol activity in screen house on mungbean. Pseudomonas isolates (HAB-13, HAB-2, HAB-4, HAB-1, HAB-14, HAB-9, HAB-7 and HAB-25) used as soil drench greatly reduced the root rot-root knot infection and thereby enhanced plant growth, root nodulation and yield in mungbean. Besides, rhizospheric and endophytic, epiphytic fluorescent Pseudomonas associated with healthy fruits may be used as biocontrol agent against root rotting fungi, besides, using for the mangemnet of postharvest diseases. (author)

Measuring and Modeling Root Distribution and Root Reinforcement in Forested Slopes for Slope Stability Calculations

Science.gov (United States)

Cohen, D.; Giadrossich, F.; Schwarz, M.; Vergani, C.

2016-12-01

Roots provide mechanical anchorage and reinforcement of soils on slopes. Roots also modify soil hydrological properties (soil moisture content, pore-water pressure, preferential flow paths) via subsurface flow path associated with root architecture, root density, and root-size distribution. Interactions of root-soil mechanical and hydrological processes are an important control of shallow landslide initiation during rainfall events and slope stability. Knowledge of root-distribution and root strength are key components to estimate slope stability in vegetated slopes and for the management of protection forest in steep mountainous area. We present data that show the importance of measuring root strength directly in the field and present methods for these measurements. These data indicate that the tensile force mobilized in roots depends on root elongation (a function of soil displacement), root size, and on whether roots break in tension of slip out of the soil. Measurements indicate that large lateral roots that cross tension cracks at the scarp are important for slope stability calculations owing to their large tensional resistance. These roots are often overlooked and when included, their strength is overestimated because extrapolated from measurements on small roots. We present planned field experiments that will measure directly the force held by roots of different sizes during the triggering of a shallow landslide by rainfall. These field data are then used in a model of root reinforcement based on fiber-bundle concepts that span different spacial scales, from a single root to the stand scale, and different time scales, from timber harvest to root decay. This model computes the strength of root bundles in tension and in compression and their effect on soil strength. Up-scaled to the stand the model yields the distribution of root reinforcement as a function of tree density, distance from tree, tree species and age with the objective of providing quantitative

Delayed radiation necrosis of a spinal nerve root presenting as an intra-spinal mass

International Nuclear Information System (INIS)

Mikhael, M.A.

1979-01-01

Details are given of the case history of a 16 year old male with a six week history of progressive weakness of the arms and legs seven years after his last course of radiotherapy for Hodgkin's disease. Histopathological examination of an excised hard fibrotic mass revealed delayed radiation necrosis of a spinal root nerve with no evidence of Hodgkin's disease. The mass recurred seven months later and was removed by wide excision. The spinal cord had probably received less than 2000 rad during one course of radiotherapy. The 15 MeV electron beam of the second course of radiotherapy would not have penetrated the spinal cord itself, but the nerve roots would have received a much higher dose. Nerve roots should therefore be shielded whenever possible during radiotherapy, and the possibility of radiation necrosis considered in the differential diagnosis of intraspinal masses in the field of earlier radiation therapy. (UK)

Rooting depth and root depth distribution of Trifolium repens × T. uniflorum interspecific hybrids.

Science.gov (United States)

Nichols, S N; Hofmann, R W; Williams, W M; van Koten, C

2016-05-20

Traits related to root depth distribution were examined in Trifolium repens × T. uniflorum backcross 1 (BC 1 ) hybrids to determine whether root characteristics of white clover could be improved by interspecific hybridization. Two white clover cultivars, two T. uniflorum accessions and two BC 1 populations were grown in 1 -m deep tubes of sand culture. Maximum rooting depth and root mass distribution were measured at four harvests over time, and root distribution data were fitted with a regression model to provide measures of root system shape. Morphological traits were measured at two depths at harvest 3. Root system shape of the hybrids was more similar to T. uniflorum than to white clover. The hybrids and T. uniflorum had a higher rate of decrease in root mass with depth than white clover, which would result in higher proportions of root mass in the upper profile. Percentage total root mass at 100-200 mm depth was higher for T. uniflorum than white clover, and for Crusader BC 1 than 'Crusader'. Roots of the hybrids and T. uniflorum also penetrated deeper than those of white clover. T. uniflorum had thicker roots at 50-100 mm deep than the other entries, and more of its fine root mass at 400-500 mm. The hybrids and white clover had more of their fine root mass higher in the profile. Consequently, T. uniflorum had a higher root length density at 400-500 mm than most entries, and a smaller decrease in root length density with depth. These results demonstrate that rooting characteristics of white clover can be altered by hybridization with T. uniflorum, potentially improving water and nutrient acquisition and drought resistance. Root traits of T. uniflorum are likely to be adaptations to soil moisture and fertility in its natural environment. © The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

The components of rice and watermelon root exudates and their effects on pathogenic fungus and watermelon defense.

Science.gov (United States)

Ren, Lixuan; Huo, Hongwei; Zhang, Fang; Hao, Wenya; Xiao, Liang; Dong, Caixia; Xu, Guohua

2016-06-02

Watermelon (Citrullus lanatus) is susceptible to wilt disease caused by the fungus Fusarium oxysporum f. sp niveum (FON). Intercropping management of watermelon/aerobic rice (Oryza sativa) alleviates watermelon wilt disease, because some unidentified component(s) in rice root exudates suppress FON sporulation and spore germination. Here, we show that the phenolic acid p-coumaric acid is present in rice root exudates only, and it inhibits FON spore germination and sporulation. We found that exogenously applied p-coumaric acid up-regulated the expression of ClPR3 in roots, as well as increased chitinase activity in leaves. Furthermore, exogenously applied p-coumaric acid increased β-1,3-glucanase activity in watermelon roots. By contrast, we found that ferulic acid was secreted by watermelon roots, but not by rice roots, and that it stimulated spore germination and sporulation of FON. Exogenous application of ferulic acid down-regulated ClPR3 expression and inhibited chitinase activity in watermelon leaves. Salicylic acid was detected in both watermelon and rice root exudates, which stimulated FON spore germination at low concentrations and suppressed spore germination at high concentrations. Exogenously applied salicylic acid did not alter ClPR3 expression, but did increase chitinase and β-1,3-glucanase activities in watermelon leaves. Together, our results show that the root exudates of phenolic acids were different between rice and watermelon, which lead to their special ecological roles on pathogenic fungus and watermelon defense.

Root form and clinical radiographic estimation of the number of root ...

African Journals Online (AJOL)

The root form of 100 extracted maxillary premolars, the pre-operative radiographic estimation and clinical radiographic determination of the number of root canals in 340 maxillary premolars of Nigerian patients attending the dental hospital for endodontic treatment were studied. The maxillary second premolars had one root ...

Abscisic Acid Regulates Auxin Homeostasis in Rice Root Tips to Promote Root Hair Elongation

Directory of Open Access Journals (Sweden)

Tao Wang

2017-06-01

Full Text Available Abscisic acid (ABA plays an essential role in root hair elongation in plants, but the regulatory mechanism remains to be elucidated. In this study, we found that exogenous ABA can promote rice root hair elongation. Transgenic rice overexpressing SAPK10 (Stress/ABA-activated protein kinase 10 had longer root hairs; rice plants overexpressing OsABIL2 (OsABI-Like 2 had attenuated ABA signaling and shorter root hairs, suggesting that the effect of ABA on root hair elongation depends on the conserved PYR/PP2C/SnRK2 ABA signaling module. Treatment of the DR5-GUS and OsPIN-GUS lines with ABA and an auxin efflux inhibitor showed that ABA-induced root hair elongation depends on polar auxin transport. To examine the transcriptional response to ABA, we divided rice root tips into three regions: short root hair, long root hair and root tip zones; and conducted RNA-seq analysis with or without ABA treatment. Examination of genes involved in auxin transport, biosynthesis and metabolism indicated that ABA promotes auxin biosynthesis and polar auxin transport in the root tip, which may lead to auxin accumulation in the long root hair zone. Our findings shed light on how ABA regulates root hair elongation through crosstalk with auxin biosynthesis and transport to orchestrate plant development.

Changes in lumbosacral spinal nerve roots on diffusion tensor imaging in spinal stenosis

Directory of Open Access Journals (Sweden)

Zhong-jun Hou

2015-01-01

Full Text Available Lumbosacral degenerative disc disease is a common cause of lower back and leg pain. Conventional T1-weighted imaging (T1WI and T2-weighted imaging (T2WI scans are commonly used to image spinal cord degeneration. However, these modalities are unable to image the entire lumbosacral spinal nerve roots. Thus, in the present study, we assessed the potential of diffusion tensor imaging (DTI for quantitative assessment of compressed lumbosacral spinal nerve roots. Subjects were 20 young healthy volunteers and 31 patients with lumbosacral stenosis. T2WI showed that the residual dural sac area was less than two-thirds that of the corresponding normal area in patients from L 3 to S 1 stenosis. On T1WI and T2WI, 74 lumbosacral spinal nerve roots from 31 patients showed compression changes. DTI showed thinning and distortion in 36 lumbosacral spinal nerve roots (49% and abruption in 17 lumbosacral spinal nerve roots (23%. Moreover, fractional anisotropy values were reduced in the lumbosacral spinal nerve roots of patients with lumbosacral stenosis. These findings suggest that DTI can objectively and quantitatively evaluate the severity of lumbosacral spinal nerve root compression.

Changes in lumbosacral spinal nerve roots on diffusion tensor imaging in spinal stenosis.

Science.gov (United States)

Hou, Zhong-Jun; Huang, Yong; Fan, Zi-Wen; Li, Xin-Chun; Cao, Bing-Yi

2015-11-01

Lumbosacral degenerative disc disease is a common cause of lower back and leg pain. Conventional T1-weighted imaging (T1WI) and T2-weighted imaging (T2WI) scans are commonly used to image spinal cord degeneration. However, these modalities are unable to image the entire lumbosacral spinal nerve roots. Thus, in the present study, we assessed the potential of diffusion tensor imaging (DTI) for quantitative assessment of compressed lumbosacral spinal nerve roots. Subjects were 20 young healthy volunteers and 31 patients with lumbosacral stenosis. T2WI showed that the residual dural sac area was less than two-thirds that of the corresponding normal area in patients from L3 to S1 stenosis. On T1WI and T2WI, 74 lumbosacral spinal nerve roots from 31 patients showed compression changes. DTI showed thinning and distortion in 36 lumbosacral spinal nerve roots (49%) and abruption in 17 lumbosacral spinal nerve roots (23%). Moreover, fractional anisotropy values were reduced in the lumbosacral spinal nerve roots of patients with lumbosacral stenosis. These findings suggest that DTI can objectively and quantitatively evaluate the severity of lumbosacral spinal nerve root compression.

[Effects nutrients on the seedlings root hair development and root growth of Poncirus trifoliata under hydroponics condition].

Science.gov (United States)

Cao, Xiu; Xia, Ren-Xue; Zhang, De-Jian; Shu, Bo

2013-06-01

Ahydroponics experiment was conducted to study the effects of nutrients (N, P, K, Ca, Mg, Fe, and Mn) deficiency on the length of primary root, the number of lateral roots, and the root hair density, length, and diameter on the primary root and lateral roots of Poncirus trifoliata seedlings. Under the deficiency of each test nutrient, root hair could generate, but was mainly concentrated on the root base and fewer on the root tip. The root hair density on lateral roots was significantly larger than that on primary root, but the root hair length was in adverse. The deficiency of each test nutrient had greater effects on the growth and development of root hairs, with the root hair density on primary root varied from 55.0 to 174.3 mm(-2). As compared with the control, Ca deficiency induced the significant increase of root hair density and length on primary root, P deficiency promoted the root hair density and length on the base and middle part of primary root and on the lateral roots significantly, Fe deficiency increased the root hair density but decreased the root hair length on the tip of primary root significantly, K deficiency significantly decreased the root hair density, length, and diameter on primary root and lateral roots, whereas Mg deficiency increased the root hair length of primary root significantly. In all treatments of nutrient deficiency, the primary root had the similar growth rate, but, with the exceptions of N and Mg deficiency, the lateral roots exhibited shedding and regeneration.

Root fractures

DEFF Research Database (Denmark)

Andreasen, Jens Ove; Christensen, Søren Steno Ahrensburg; Tsilingaridis, Georgios

2012-01-01

The purpose of this study was to analyze tooth loss after root fractures and to assess the influence of the type of healing and the location of the root fracture. Furthermore, the actual cause of tooth loss was analyzed....

GiA Roots: software for the high throughput analysis of plant root system architecture

Science.gov (United States)

2012-01-01

Background Characterizing root system architecture (RSA) is essential to understanding the development and function of vascular plants. Identifying RSA-associated genes also represents an underexplored opportunity for crop improvement. Software tools are needed to accelerate the pace at which quantitative traits of RSA are estimated from images of root networks. Results We have developed GiA Roots (General Image Analysis of Roots), a semi-automated software tool designed specifically for the high-throughput analysis of root system images. GiA Roots includes user-assisted algorithms to distinguish root from background and a fully automated pipeline that extracts dozens of root system phenotypes. Quantitative information on each phenotype, along with intermediate steps for full reproducibility, is returned to the end-user for downstream analysis. GiA Roots has a GUI front end and a command-line interface for interweaving the software into large-scale workflows. GiA Roots can also be extended to estimate novel phenotypes specified by the end-user. Conclusions We demonstrate the use of GiA Roots on a set of 2393 images of rice roots representing 12 genotypes from the species Oryza sativa. We validate trait measurements against prior analyses of this image set that demonstrated that RSA traits are likely heritable and associated with genotypic differences. Moreover, we demonstrate that GiA Roots is extensible and an end-user can add functionality so that GiA Roots can estimate novel RSA traits. In summary, we show that the software can function as an efficient tool as part of a workflow to move from large numbers of root images to downstream analysis. PMID:22834569

Embryonic origin of the Arabidopsis primary root and root meristem initials

NARCIS (Netherlands)

Scheres, B.J.G.; Wolkenfelt, H.; Willemsen, V.; Terlouw, M.; Lawson, E.; Dean, C.; Weisbeek, P.

1994-01-01

The embryonic origin of the Arabidopsis root and hypocotyl region has been investigated using histological techniques and clonal analysis. Our data reveal the pattern of cell division in the embryo giving rise to the various initials within the root promeristem. A small region of the root at its

Leaf reddening disease of pineapple in Ghana | Awuah | Ghana ...

African Journals Online (AJOL)

Mealybugs and ants are sometimes, but not always, associated with diseased plants. Nematodes of the genera Pratylenchus, Aphelenchus and. Helicotylenchus have been recovered, though infrequently, from roots and root zone soil of diseased plants. Based on these preliminary results and field observations, it is ...

Nursery response of container Pinus palustris seedlings to nitrogen supply and subsequent effects on outplanting performance

Science.gov (United States)

D. Paul Jackson; R. Kasten Dumroese; James P. Barnett

2012-01-01

Container longleaf pine (Pinus palustris) seedlings often survive and grow better after outplanting than bareroot seedlings. Because of this, most longleaf pine are now produced in containers. Little is known about nursery fertilization effects on the quality of container longleaf pine seedlings and how that influences outplanting performance. We compared various...

MAIL1 is essential for development of the primary root but not of anchor roots.

Science.gov (United States)

Ühlken, Christine; Hoth, Stefan; Weingartner, Magdalena

2014-01-01

MAIN-LIKE1 (MAIL1) is a ubiquitously expressed nuclear protein, which has a crucial function during root development. We have recently described loss of function mutants for MAIL1, in which the organization and function of the primary root meristem is lost soon after germination. Moreover cell differentiation is impaired resulting in primary root growth arrest soon after emergence. Here we show that mail1 mutants form several anchor roots from the hypocotyl to root junction. These anchor roots show similar defects in the organization of the stem cell niche as the primary root. In contrast, differentiation processes are not impaired and thus anchor roots seem to be able to compensate for the loss of primary root function. Our data show that MAIL1 is essential for specification of cell fate in the primary root but not in anchor roots.

computer-aided root aided root aided root aided root-locus

African Journals Online (AJOL)

User

m, stability, transient response, root-locus, iteration he means by which any a machine, mechanism or d or altered in accordance. Introduction of feedback has the advantages of f system performance to in system parameters, ponse and minimizing the ignals. However, feedback of components, increases ain and introduces ...

Why rooting fails

OpenAIRE

Creutz, Michael

2007-01-01

I explore the origins of the unphysical predictions from rooted staggered fermion algorithms. Before rooting, the exact chiral symmetry of staggered fermions is a flavored symmetry among the four "tastes." The rooting procedure averages over tastes of different chiralities. This averaging forbids the appearance of the correct 't Hooft vertex for the target theory.

Root system markup language: toward a unified root architecture description language.

Science.gov (United States)

Lobet, Guillaume; Pound, Michael P; Diener, Julien; Pradal, Christophe; Draye, Xavier; Godin, Christophe; Javaux, Mathieu; Leitner, Daniel; Meunier, Félicien; Nacry, Philippe; Pridmore, Tony P; Schnepf, Andrea

2015-03-01

The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary facilities, yet it is widely accepted that none of these software tools is able to extract in an efficient way the growing array of static and dynamic features for different types of images and species. We describe the Root System Markup Language (RSML), which has been designed to overcome two major challenges: (1) to enable portability of root architecture data between different software tools in an easy and interoperable manner, allowing seamless collaborative work; and (2) to provide a standard format upon which to base central repositories that will soon arise following the expanding worldwide root phenotyping effort. RSML follows the XML standard to store two- or three-dimensional image metadata, plant and root properties and geometries, continuous functions along individual root paths, and a suite of annotations at the image, plant, or root scale at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An XML schema describes the features and constraints of RSML, and open-source packages have been developed in several languages (R, Excel, Java, Python, and C#) to enable researchers to integrate RSML files into popular research workflow. © 2015 American Society of Plant Biologists. All Rights Reserved.

Hypertrophic Synovitis of the Facet Joint Causing Root Pain

Directory of Open Access Journals (Sweden)

Koichi Iwatsuki M.D.

2008-01-01

Full Text Available Osteoarthritic changes in the facet joints are common in the presence of degenerative disc disease. Changes in the joint capsule accompany changes in the articular surfaces. Intraspinal synovial cysts that cause radicular pain, cauda equina syndrome, and myelopathy have been reported; however, there have been few reports in orthopedic or neurosurgical literature regarding hypertrophic synovitis of the facet joint presenting as an incidental para-articular mass. Here, we report a case of hypertrophic synovitis causing root pain. We describe the case of a 65-year-old man suffering from right sciatica and right leg pain in the L5 nerve-root dermatome for 1 year; magnetic resonance imaging (MRI revealed an enhanced mass around the L4–5 facet joint. We investigated this mass pathologically. After right medial facetectomy, the symptoms resolved. Pathological investigation revealed this mass was hypertrophic synovitis. Hypertrophic synovitis of the facet joint might cause root pain.

Characterization of Root and Shoot Traits in Wheat Cultivars with Putative Differences in Root System Size

Directory of Open Access Journals (Sweden)

Victoria Figueroa-Bustos

2018-07-01

Full Text Available Root system size is a key trait for improving water and nitrogen uptake efficiency in wheat (Triticum aestivum L.. This study aimed (i to characterize the root system and shoot traits of five wheat cultivars with apparent differences in root system size; (ii to evaluate whether the apparent differences in root system size observed at early vegetative stages in a previous semi-hydroponic phenotyping experiment are reflected at later phenological stages in plants grown in soil using large rhizoboxes. The five wheat cultivars were grown in a glasshouse in rhizoboxes filled to 1.0 m with field soil. Phenology and shoot traits were measured and root growth and proliferation were mapped to quantify root length density (RLD, root length per plant, root biomass and specific root length (SRL. Wheat cultivars with large root systems had greater root length, more root biomass and thicker roots, particularly in the top 40 cm, than those with small root systems. Cultivars that reached anthesis later had larger root system sizes than those that reached anthesis earlier. Later anthesis allowed more time for root growth and proliferation. Cultivars with large root systems had 25% more leaf area and biomass than those with small root systems, which presumably reflects high canopy photosynthesis to supply the demand for carbon assimilates to roots. Wheat cultivars with contrasting root system sizes at the onset of tillering (Z2.1 in a semi-hydroponic phenotyping system maintained their size ranking at booting (Z4.5 when grown in soil. Phenology, particularly time to anthesis, was associated with root system size.

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions.

Science.gov (United States)

Uga, Yusaku; Sugimoto, Kazuhiko; Ogawa, Satoshi; Rane, Jagadish; Ishitani, Manabu; Hara, Naho; Kitomi, Yuka; Inukai, Yoshiaki; Ono, Kazuko; Kanno, Noriko; Inoue, Haruhiko; Takehisa, Hinako; Motoyama, Ritsuko; Nagamura, Yoshiaki; Wu, Jianzhong; Matsumoto, Takashi; Takai, Toshiyuki; Okuno, Kazutoshi; Yano, Masahiro

2013-09-01

The genetic improvement of drought resistance is essential for stable and adequate crop production in drought-prone areas. Here we demonstrate that alteration of root system architecture improves drought avoidance through the cloning and characterization of DEEPER ROOTING 1 (DRO1), a rice quantitative trait locus controlling root growth angle. DRO1 is negatively regulated by auxin and is involved in cell elongation in the root tip that causes asymmetric root growth and downward bending of the root in response to gravity. Higher expression of DRO1 increases the root growth angle, whereby roots grow in a more downward direction. Introducing DRO1 into a shallow-rooting rice cultivar by backcrossing enabled the resulting line to avoid drought by increasing deep rooting, which maintained high yield performance under drought conditions relative to the recipient cultivar. Our experiments suggest that control of root system architecture will contribute to drought avoidance in crops.

Creating prescription maps from historical imagery for site-specific management of cotton root rot

Science.gov (United States)

Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivore, is a severe plant disease that has affected cotton production for over a century. Recent research found that a commercial fungicide, Topguard (flutriafol), was able to control this disease. As a result, Topguard Terra Fungic...

An appraisal of the potency of roots of Anogeissus leiocarpus (DC ...

African Journals Online (AJOL)

DR. IDAYAT GBADAMOSI

2014-06-30

Jun 30, 2014 ... drug resistant strains of E. coli. The roots of the two plants ... major organism implicated in Urinary Tract Infections. (UTIs), the ... coli has antibiotic resistance genes (Bailey et al.,. 2010) partly ..... Pediatric Infectious. Disease ...

A New Anatomically Based Nomenclature for the Roots and Root Canals—Part 1: Maxillary Molars

OpenAIRE

Kottoor, Jojo; Albuquerque, Denzil Valerian; Velmurugan, Natanasabapathy

2012-01-01

Numerous terminologies have been employed in the dental literature to describe the roots and root canal systems of maxillary molars. This multiplicity in naming of roots and canals makes the reader susceptible to misinterpretation and confusion. No consensus thus far has been arrived at for defining the names of roots and root canals in maxillary molars, including their various morphological aberrations. The anatomical relation of roots and their root canals were identified and were subsequen...

Cadmium translocation by contractile roots differs from that in regular, non-contractile roots.

Science.gov (United States)

Lux, Alexander; Lackovič, Andrej; Van Staden, Johannes; Lišková, Desana; Kohanová, Jana; Martinka, Michal

2015-06-01

Contractile roots are known and studied mainly in connection with the process of shrinkage of their basal parts, which acts to pull the shoot of the plant deeper into the ground. Previous studies have shown that the specific structure of these roots results in more intensive water uptake at the base, which is in contrast to regular root types. The purpose of this study was to find out whether the basal parts of contractile roots are also more active in translocation of cadmium to the shoot. Plants of the South African ornamental species Tritonia gladiolaris were cultivated in vitro for 2 months, at which point they possessed well-developed contractile roots. They were then transferred to Petri dishes with horizontally separated compartments of agar containing 50 µmol Cd(NO3)2 in the region of the root base or the root apex. Seedlings of 4-d-old maize (Zea mays) plants, which do not possess contractile roots, were also transferred to similar Petri dishes. The concentrations of Cd in the leaves of the plants were compared after 10 d of cultivation. Anatomical analyses of Tritonia roots were performed using appropriately stained freehand cross-sections. The process of contraction required specific anatomical adaptation of the root base in Tritonia, with less lignified and less suberized tissues in comparison with the subapical part of the root. These unusual developmental characteristics were accompanied by more intensive translocation of Cd ions from the basal part of contractile roots to the leaves than from the apical-subapical root parts. The opposite effects were seen in the non-contractile roots of maize, with higher uptake and transport by the apical parts of the root and lower uptake and transport by the basal part. The specific characteristics of contractile roots may have a significant impact on the uptake of ions, including toxic metals from the soil surface layers. This may be important for plant nutrition, for example in the uptake of nutrients from

Detection of the symptomatic nerve root

International Nuclear Information System (INIS)

Toyone, Tomoaki; Takahashi, Kazuhisa; Yamagata, Masayasu

1993-01-01

Twenty-five patients with lumbar disc herniation with a chief complaint of unilateral leg pain underwent gadolinium-DTPA enhanced MRI, particularly to examine the nerve root in the distal area of hernia. MRI appearance fell into three grades: 0 - no visualization (n=7), 1 - heterogeneous visualization (n=7), and 2 - homogeneous visualization (n=10). In the quantitative evaluation of the severity of sciatica using SLR and JOA scores, it was found to be associated with the degree of visualization. All patients of grade 2 were required to receive surgery because pain relief was not attained in spite of 3 months or more conservative treatment. These findings indicatd the usefulness of MRI in predicting prognosis, as well as in diagnosing the responsible level. Since blood-nerve barrier damage and intraneural edema are considered to be involved in the visualization of the nerve root on MRI, MRI will help in diagnosing radicular sciatica and elucidating the pathophysiology of the disease. (N.K.)

One-visit endodontic retreatment of combined external/internal root resorption using a calcium-enriched mixture.

Science.gov (United States)

Asgary, Saeed; Ahmadyar, Maryam

2012-01-01

Combined external and internal root resorption (ERR/IRR) is a rare endodontic disease that leads to alteration of the root canal anatomy. This report describes the management of an endodontically failed molar that was severely affected by ERR/IRR. Radiographic examination demonstrated inadequate obturation of the root canals associated with ERR/IRR and a large periradicular lesion. During nonsurgical endodontic retreatment, the root canals were subjected to conventional chemomechanical debridement. In the same session, the entire distal root canal was obturated using a calcium-enriched mixture (CEM) cement, and the mesial canals were obturated with gutta-percha/sealer. The clinical findings and follow-up radiographs indicated favorable treatment outcomes after 12 months. One-visit application of CEM cement could be a successful approach for the management of combined ERR/IRR.

Systematic review and meta-analysis of surgical outcomes in Marfan patients undergoing aortic root surgery by composite-valve graft or valve sparing root replacement.

Science.gov (United States)

Flynn, Campbell D; Tian, David H; Wilson-Smith, Ashley; David, Tirone; Matalanis, George; Misfeld, Martin; Mastrobuoni, Stefano; El Khoury, Gebrine; Yan, Tristan D

2017-11-01

A major, life-limiting feature of Marfan syndrome (MFS) is the presence of aneurysmal disease. Cardiovascular intervention has dramatically improved the life expectancy of Marfan patients. Traditionally, the management of aortic root disease has been undertaken with composite-valve graft replacing the aortic valve and proximal aorta; more recently, valve sparing procedures have been developed to avoid the need for anticoagulation. This meta-analysis assesses the important surgical outcomes of the two surgical techniques. A systematic review and meta-analysis of 23 studies reporting the outcomes of aortic root surgery in Marfan patients with data extracted for outcomes of early and late mortality, thromboembolic events, late bleeding complications and surgical reintervention rates. The outcomes of 2,976 Marfan patients undergoing aortic root surgery were analysed, 1,624 patients were treated with composite valve graft (CVG) and 1,352 patients were treated with valve sparing root replacement (VSRR). When compared against CVG, VSRR was associated with reduced risk of thromboembolism (OR =0.32; 95% CI, 0.16-0.62, P=0.0008), late hemorrhagic complications (OR =0.18; 95% CI, 0.07-0.45; P=0.0003) and endocarditis (OR =0.27; 95% CI, 0.10-0.68; P=0.006). Importantly there was no significant difference in reintervention rates between VSRR and CVG (OR =0.89; 95% CI, 0.35-2.24; P=0.80). There is an increasing body of evidence that VSRR can be reliably performed in Marfan patients, resulting in a durable repair with no increased risk of re-operation compared to CVG, thus avoiding the need for systemic anticoagulation in selected patients.

Root type matters: measurements of water uptake by seminal, crown and lateral roots of maize

Science.gov (United States)

Ahmed, Mutez Ali; Zarebanadkouki, Mohsen; Kaestner, Anders; Carminati, Andrea

2016-04-01

Roots play a key role in water acquisition and are a significant component of plant adaptation to different environmental conditions. Although maize (Zea mays L.) is one of the most important crops worldwide, there is limited information on the function of different root segments and types in extracting water from soils. Aim of this study was to investigate the location of root water uptake in mature maize. We used neutron radiography to image the spatial distribution of maize roots and trace the transport of injected deuterated water (D2O) in soil and roots. Maize plants were grown in aluminum containers filled with a sandy soil that was kept homogeneously wet throughout the experiment. When the plants were five weeks-old, we injected D2O into selected soil regions. The transport of D2O was simulated using a diffusion-convection numerical model. By fitting the observed D2O transport we quantified the diffusion coefficient and the water uptake of the different root segments. The model was initially developed and tested with two weeks-old maize (Ahmed et. al. 2015), for which we found that water was mainly taken up by lateral roots and the water uptake of the seminal roots was negligible. Here, we used this method to measure root water uptake in a mature maize root system. The root architecture of five weeks-old maize consisted of primary and seminal roots with long laterals and crown (nodal) roots that emerged from the above ground part of the plant two weeks after planting. The crown roots were thicker than the seminal roots and had fewer and shorter laterals. Surprisingly, we found that the water was mainly taken up by the crown roots and their laterals, while the lateral roots of seminal roots, which were the main location of water uptake of younger plants, stopped to take up water. Interestingly, we also found that in contrast to the seminal roots, the crown roots were able to take up water also from their distal segments. We conclude that for the two weeks

MR Imaging of a Posterior Root Tear of the Medial Meniscus: Diagnostic Accuracy of Various Tear Configurations and Associated Knee Abnormalities

International Nuclear Information System (INIS)

Lee, Hyang Mi; Shim, Jae Chan; Kim, Jin Goo; Lee, Jae Myeong; Nam, Mee Young; Lee, Ghi Jai; Kim, Ho Kyun; Suh, Jung Ho

2010-01-01

To evaluate the diagnostic accuracy of the various tear configurations in a medial meniscal posterior horn root tear and assess whether any correlation exists with other associated knee abnormalities in MR imaging. A retrospective review of 146 preoperative knee MR images were performed by one experienced musculoskeletal radiologist. The tear configuration and other abnormalities were evaluated. Sensitivity, specificity, and diagnostic accuracy of each configuration in the medial meniscal posterior horn root tear were calculated. A total of 48 medial meniscal posterior horn root tears including 38 full-thickness radial, 7 partial-thickness radial, and 3 complex tears were confirmed during arthroscopy. Overall, the sensitivity, specificity, and accuracy for the detection of medial meniscal posterior horn root tear were 92% (44/48), 99% (97/98), and 97% (141/146), respectively. For each tear configuration, sensitivity, specificity, and accuracy were 82% (31/38), 97% (105/108), and 93% (136/146) for full-thickness radial tears, respectively, and 43% (3/7), 94% (131/139), and 91% (134/146) for partial-thickness radial tears, respectively. The incidence of degenerative joint disease was 85% (41/48) for the tear group, revealing a strong association. In patients with a root tear and with degenerative joint disease, the incidence of high grade cartilage defects involving the medial femoral condyle was at 80% (33/41), compared to 56% (23/41) for the presence of medial meniscal extrusion. In contrast, a similar comparison of incidence for patients with no root tears but with degenerative joint disease was at 68% (17/25) and 26% (8/31), respectively. MR imaging is very sensitive for the detection of medial meniscal root tears, but has reduced the accuracy with regard to each tear configuration. Medial meniscal root tears showed a strong association with degenerative joint disease. High grade cartilage defects of the medial femoral condyle and medial meniscal extrusions also

MR Imaging of a Posterior Root Tear of the Medial Meniscus: Diagnostic Accuracy of Various Tear Configurations and Associated Knee Abnormalities

Energy Technology Data Exchange (ETDEWEB)

Lee, Hyang Mi; Shim, Jae Chan; Kim, Jin Goo; Lee, Jae Myeong; Nam, Mee Young; Lee, Ghi Jai; Kim, Ho Kyun; Suh, Jung Ho [Inje University College of Medicine, Seoul Paik Hospital, Seoul (Korea, Republic of)

2010-11-15

To evaluate the diagnostic accuracy of the various tear configurations in a medial meniscal posterior horn root tear and assess whether any correlation exists with other associated knee abnormalities in MR imaging. A retrospective review of 146 preoperative knee MR images were performed by one experienced musculoskeletal radiologist. The tear configuration and other abnormalities were evaluated. Sensitivity, specificity, and diagnostic accuracy of each configuration in the medial meniscal posterior horn root tear were calculated. A total of 48 medial meniscal posterior horn root tears including 38 full-thickness radial, 7 partial-thickness radial, and 3 complex tears were confirmed during arthroscopy. Overall, the sensitivity, specificity, and accuracy for the detection of medial meniscal posterior horn root tear were 92% (44/48), 99% (97/98), and 97% (141/146), respectively. For each tear configuration, sensitivity, specificity, and accuracy were 82% (31/38), 97% (105/108), and 93% (136/146) for full-thickness radial tears, respectively, and 43% (3/7), 94% (131/139), and 91% (134/146) for partial-thickness radial tears, respectively. The incidence of degenerative joint disease was 85% (41/48) for the tear group, revealing a strong association. In patients with a root tear and with degenerative joint disease, the incidence of high grade cartilage defects involving the medial femoral condyle was at 80% (33/41), compared to 56% (23/41) for the presence of medial meniscal extrusion. In contrast, a similar comparison of incidence for patients with no root tears but with degenerative joint disease was at 68% (17/25) and 26% (8/31), respectively. MR imaging is very sensitive for the detection of medial meniscal root tears, but has reduced the accuracy with regard to each tear configuration. Medial meniscal root tears showed a strong association with degenerative joint disease. High grade cartilage defects of the medial femoral condyle and medial meniscal extrusions also

ROOT HYDRAULIC CONDUCTIVITY AND PHOTOSYNTHETIC CAPACITY OF EUCALYPT CLONAL CUTTINGS WITH ROOT MALFORMATION INDUCTIONS

Directory of Open Access Journals (Sweden)

Fábio Afonso Mazzei Moura de Assis Figueiredo

2014-06-01

Full Text Available http://dx.doi.org/10.5902/1980509814566The gain reduction of wood biomass in trees has been assigned to root deformations even in the nursery phase. The objective of this work was the evaluation of the root system hydraulic conductivity, gas exchanges and photochemical efficiency of eucalypt clonal cuttings with and without root deformation inductions. The treatments were: 1 operational cuttings without root malformation inductions (grown according to the used methodology of Fibria Cellulose S.A.; 2 root deformation inductions. These inductions did not promote decrease in the root volume. However, the deformations brought reduction of the root system hydraulic conductivity. Lower photosynthetic rates were also observed along the day in the cuttings in the root deformed cuttings. This decreasing rate is connected to stomatal and non stomatal factors.

Imaging O2 changes induced in tomato roots by fungal pathogen

Science.gov (United States)

Rubol, S.; Turco, E.; Rodeghiero, M.; Bellin, A.

2014-12-01

In the last decade, planar optodes have demonstrated to be a useful non-invasive tool to monitor real time oxygen concentrations in a wide range of applications. However, only limited investigations have been carried out to explore the use of optodes in plant respiration studies. In particular, their use to study plant-pathogen interactions has been not deeply investigated. Here, we present for the first time an in vitro experimental setup capable to depict the dynamical effects of the fungal pathogen Fusarium oxysporum f.sp. lycopersici (Fol) on tomato roots by the use of a recently developed optical non-invasive optode oxygen sensor (Visisens, Presens, Germany). Fol is a soil-borne pathogen and the causal agent of wilt in tomato plants, a destructive worldwide disease. The interaction Fol-tomato is widely accepted as a model system in plant pathology. In this work, oxygen concentrations are monitored continuously in time and considered a proxy for root respiration and metabolic activity. The experimental procedure reveals three different dynamic stages: 1) a uniform oxygen consumption in tomato roots earlier before pathogen colonization, 2) a progressive decrease in the oxygen concentration indicating a high metabolic activity as soon as the roots were surrounded and colonized by the fungal mycelium, and 3) absence of root respiration, as a consequence of root death. Our results suggest the ability of the fungal mycelium to move preferentially towards and along the root as a consequence of the recognition event.

PHIV-RootCell: a supervised image analysis tool for rice root anatomical parameter quantification

Directory of Open Access Journals (Sweden)

Marc eLartaud

2015-01-01

Full Text Available We developed the PHIV-RootCell software to quantify anatomical traits of rice roots transverse section images. Combined with an efficient root sample processing method for image acquisition, this program permits supervised measurements of areas (those of whole root section, stele, cortex and central metaxylem vessels, number of cell layers and number of cells per cell layer. The PHIV-RootCell toolset runs under ImageJ, an independent operating system that has a license-free status. To demonstrate the usefulness of PHIV-RootCell, we conducted a genetic diversity study and an analysis of salt-stress responses of root anatomical parameters in rice (Oryza sativa L.. Using 16 cultivars, we showed that we could discriminate between some of the varieties even at the 6 day-old stage, and that tropical japonica varieties had larger root sections due to an increase in cell number. We observed, as described previously, that root sections become enlarged under salt stress. However, our results show an increase in cell number in ground tissues (endodermis and cortex but a decrease in external (peripheral tissues (sclerenchyma, exodermis and epidermis. Thus, the PHIV-RootCell program is a user-friendly tool that will be helpful for future genetic and physiological studies that investigate root anatomical trait variations.

Root deformation reduces tolerance of lodgepole pine to attack by Warren root collar weevil.

Science.gov (United States)

Robert, Jeanne A; Lindgren, B Staffan

2010-04-01

Surveys were conducted on regenerating stands of lodgepole pine to determine the relationship between root deformation and susceptibility to attack by the Warren root collar weevil, Hylobius warreni Wood. The total number of trees attacked by H. warreni did not differ between planted and natural trees. A matched case-control logistic regression suggested that root cross-sectional area was more important in predicting weevil attack for naturally regenerated trees than for planted trees, but weevils were associated with a larger reduction in height-to-diameter ratios for trees with planted root characteristics than for trees with natural root form. Neither the stability of attacked versus unattacked trees differed significantly and there was no significant interaction of weevil attack and tree type, but weevil-killed trees had different root characteristics than alive, attacked trees. Lateral distribution and root cross-sectional area were significant predictors of alive attacked trees versus weevil-killed trees, suggesting that trees with poor lateral spread or poor root cross-sectional area are more likely to die from weevil attack. We conclude that root deformation does not necessarily increase susceptibility to attack but may increase the likelihood of mortality. Thus, measures to facilitate good root form are needed when planting pine in areas with high risk of Warren root collar weevil attack.

Plant roots use a patterning mechanism to position lateral root branches toward available water.

Science.gov (United States)

Bao, Yun; Aggarwal, Pooja; Robbins, Neil E; Sturrock, Craig J; Thompson, Mark C; Tan, Han Qi; Tham, Cliff; Duan, Lina; Rodriguez, Pedro L; Vernoux, Teva; Mooney, Sacha J; Bennett, Malcolm J; Dinneny, José R

2014-06-24

The architecture of the branched root system of plants is a major determinant of vigor. Water availability is known to impact root physiology and growth; however, the spatial scale at which this stimulus influences root architecture is poorly understood. Here we reveal that differences in the availability of water across the circumferential axis of the root create spatial cues that determine the position of lateral root branches. We show that roots of several plant species can distinguish between a wet surface and air environments and that this also impacts the patterning of root hairs, anthocyanins, and aerenchyma in a phenomenon we describe as hydropatterning. This environmental response is distinct from a touch response and requires available water to induce lateral roots along a contacted surface. X-ray microscale computed tomography and 3D reconstruction of soil-grown root systems demonstrate that such responses also occur under physiologically relevant conditions. Using early-stage lateral root markers, we show that hydropatterning acts before the initiation stage and likely determines the circumferential position at which lateral root founder cells are specified. Hydropatterning is independent of endogenous abscisic acid signaling, distinguishing it from a classic water-stress response. Higher water availability induces the biosynthesis and transport of the lateral root-inductive signal auxin through local regulation of tryptophan aminotransferase of Arabidopsis 1 and PIN-formed 3, both of which are necessary for normal hydropatterning. Our work suggests that water availability is sensed and interpreted at the suborgan level and locally patterns a wide variety of developmental processes in the root.

1-Aminocyclopropane-1-carboxylic acid (ACC) concentration and ACC synthase expression in soybean roots, root tips, and soybean cyst nematode (Heterodera glycines)-infected roots.

Science.gov (United States)

Tucker, Mark L; Xue, Ping; Yang, Ronghui

2010-01-01

Colonization of plant roots by root knot and cyst nematodes requires a functional ethylene response pathway. However, ethylene plays many roles in root development and whether its role in nematode colonization is direct or indirect, for example lateral root initiation or root hair growth, is not known. The temporal requirement for ethylene and localized synthesis of ethylene during the life span of soybean cyst nematode (SCN) on soybean roots was further investigated. Although a significant increase in ethylene evolution was not detected from SCN-colonized roots, the concentration of the immediate precursor to ethylene, 1-aminocyclopropane-1-carboxylic acid (ACC), was higher in SCN-colonized root pieces and root tips than in other parts of the root. Moreover, expression analysis of 17 ACC synthase (ACS) genes indicated that a select set of ACS genes is expressed in SCN-colonized root pieces that is clearly different from the set of genes expressed in non-colonized roots or root tips. Semi-quantitative real-time PCR indicated that ACS transcript accumulation correlates with the high concentration of ACC in root tips. In addition, an ACS-like sequence was found in the public SCN nucleotide database. Acquisition of a full-length sequence for this mRNA (accession GQ389647) and alignment with transcripts for other well-characterized ACS proteins indicated that the nematode sequence is missing a key element required for ACS activity and therefore probably is not a functional ACS. Moreover, no significant amount of ACC was found in any growth stage of SCN that was tested.

Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome.

Science.gov (United States)

Zhang, Yunzeng; Xu, Jin; Riera, Nadia; Jin, Tao; Li, Jinyun; Wang, Nian

2017-08-10

Roots are the primary site for plant-microbe interactions. Among the three root-associated layers (i.e., rhizosphere, rhizoplane, and endorhiza), the rhizoplane is a key component serving a critical gating role that controls microbial entry into plant roots. The microbial communities colonizing the three layers are believed to be gradually enriched from the bulk soil inoculum. However, it is unknown how this enrichment process, particularly the rhizosphere to rhizoplane step, is affected by biotic stresses, such as disease. In this study, we address this question using the citrus root-associated microbiome as a model. We identified the rhizosphere-to-rhizoplane-enriched taxonomic and functional properties of the citrus root-associated microbiome and determined how they were affected by Huanglongbing (HLB), a severe systemic disease caused by Candidatus Liberibacter asiaticus, using metagenomic and metatranscriptomic approaches. Multiple rhizoplane-enriched genera were identified, with Bradyrhizobium and Burkholderia being the most dominant. Plant-derived carbon sources are an important driving force for the enrichment process. The enrichment of functional attributes, such as motility, chemotaxis, secretion systems, and lipopolysaccharide (LPS) synthesis, demonstrated more active microbe-plant interactions on the rhizoplane than the rhizosphere. We observed that HLB impaired the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome in three ways: (1) by decreasing the relative abundance of most rhizoplane-enriched genera; (2) by reducing the relative abundance and/or expression activity of the functional attributes involved in microbe-plant interactions; and (3) by recruiting more functional features involved in autotrophic life cycle adaptation, such as carbon fixation and nitrogen nitrification in the HLB rhizoplane microbiome. Finally, our data showed that inoculation of Burkholderia strains isolated from the healthy citrus root

Relationships between root respiration rate and root morphology, chemistry and anatomy in Larix gmelinii and Fraxinus mandshurica.

Science.gov (United States)

Jia, Shuxia; McLaughlin, Neil B; Gu, Jiacun; Li, Xingpeng; Wang, Zhengquan

2013-06-01

Tree roots are highly heterogeneous in form and function. Previous studies revealed that fine root respiration was related to root morphology, tissue nitrogen (N) concentration and temperature, and varied with both soil depth and season. The underlying mechanisms governing the relationship between root respiration and root morphology, chemistry and anatomy along the root branch order have not been addressed. Here, we examined these relationships of the first- to fifth-order roots for near surface roots (0-10 cm) of 22-year-old larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) plantations. Root respiration rate at 18 °C was measured by gas phase O2 electrodes across the first five branching order roots (the distal roots numbered as first order) at three times of the year. Root parameters of root diameter, specific root length (SRL), tissue N concentration, total non-structural carbohydrates (starch and soluble sugar) concentration (TNC), cortical thickness and stele diameter were also measured concurrently. With increasing root order, root diameter, TNC and the ratio of root TNC to tissue N concentration increased, while the SRL, tissue N concentration and cortical proportion decreased. Root respiration rate also monotonically decreased with increasing root order in both species. Cortical tissue (including exodermis, cortical parenchyma and endodermis) was present in the first three order roots, and cross sections of the cortex for the first-order root accounted for 68% (larch) and 86% (ash) of the total cross section of the root. Root respiration was closely related to root traits such as diameter, SRL, tissue N concentration, root TNC : tissue N ratio and stele-to-root diameter proportion among the first five orders, which explained up to 81-94% of variation in the rate of root respiration for larch and up to 83-93% for ash. These results suggest that the systematic variations of root respiration rate within tree fine root system are possibly due to the

Model Persamaan Massa Karbon Akar Pohon dan Root-Shoot Ratio Massa Karbon (Equation Models of Tree Root Carbon Mass and Root-Shoot Carbon Mass Ratio

Directory of Open Access Journals (Sweden)

Elias .

2011-03-01

Full Text Available The case study was conducted in the area of Acacia mangium plantation at BKPH Parung Panjang, KPH Bogor. The objective of the study was to formulate equation models of tree root carbon mass and root to shoot carbon mass ratio of the plantation. It was found that carbon content in the parts of tree biomass (stems, branches, twigs, leaves, and roots was different, in which the highest and the lowest carbon content was in the main stem of the tree and in the leaves, respectively. The main stem and leaves of tree accounted for 70% of tree biomass. The root-shoot ratio of root biomass to tree biomass above the ground and the root-shoot ratio of root biomass to main stem biomass was 0.1443 and 0.25771, respectively, in which 75% of tree carbon mass was in the main stem and roots of tree. It was also found that the root-shoot ratio of root carbon mass to tree carbon mass above the ground and the root-shoot ratio of root carbon mass to tree main stem carbon mass was 0.1442 and 0.2034, respectively. All allometric equation models of tree root carbon mass of A. mangium have a high goodness-of-fit as indicated by its high adjusted R2.Keywords: Acacia mangium, allometric, root-shoot ratio, biomass, carbon mass

Efficacy of four plant extracts in the control of root rot disease of ...

African Journals Online (AJOL)

Garcinia cola) and neem (Azadirachta indica) extracts in the control of root rot of cowpea caused by Pythium aphanidermatum was carried out in vitro and in the field (in vivo). They were evaluated for their antifungal activity over P.

Low Light Availability Alters Root Exudation and Reduces Putative Beneficial Microorganisms in Seagrass Roots

Directory of Open Access Journals (Sweden)

Belinda C. Martin

2018-01-01

Full Text Available Seagrass roots host a diverse microbiome that is critical for plant growth and health. Composition of microbial communities can be regulated in part by root exudates, but the specifics of these interactions in seagrass rhizospheres are still largely unknown. As light availability controls primary productivity, reduced light may impact root exudation and consequently the composition of the root microbiome. Hence, we analyzed the influence of light availability on root exudation and community structure of the root microbiome of three co-occurring seagrass species, Halophila ovalis, Halodule uninervis and Cymodocea serrulata. Plants were grown under four light treatments in mesocosms for 2 weeks; control (100% surface irradiance (SI, medium (40% SI, low (20% SI and fluctuating light (10 days 20% and 4 days 100%. 16S rDNA amplicon sequencing revealed that microbial diversity, composition and predicted function were strongly influenced by the presence of seagrass roots, such that root microbiomes were unique to each seagrass species. Reduced light availability altered seagrass root exudation, as characterized using fluorescence spectroscopy, and altered the composition of seagrass root microbiomes with a reduction in abundance of potentially beneficial microorganisms. Overall, this study highlights the potential for above-ground light reduction to invoke a cascade of changes from alterations in root exudation to a reduction in putative beneficial microorganisms and, ultimately, confirms the importance of the seagrass root environment – a critical, but often overlooked space.

Root patterning

NARCIS (Netherlands)

Scheres, Ben; Laskowski, Marta

2016-01-01

The mechanisms that pattern lateral root primordial are essential for the elaboration of root system architecture, a trait of key importance for future crop breeding. But which are most important: periodic or local cues? In this issue of Journal of Experimental Botany (pages 1411-1420), Kircher

Morphological change study on root surfaces treated with curettes, sonic instruments or Er:YAG laser

International Nuclear Information System (INIS)

Guimaraes Filho, Arlindo Lopes

2004-01-01

Periodontal disease is caused by dental plaque and dental calculus on roots surfaces, specially on cervical areas. As dental plaque is the main cause and dental calculus a secondary one, it is practically impossible to separate one factor to the other one. In order to get periodontal tissue health it is necessary to eliminate dental plaque and calculus from root surfaces. In this sense, Er:YAG laser comes in as an excellent way to control periodontal disease, not only, by removing calculus and dental plaque but also for its bacteria reduction. The aim of this study is to compare, by S.E.M., root surfaces changing when they are treated with curettes and ultrasonic scaling or Er:YAG laser irradiation with two different energy levels of 60 mJ/pulse and 100 mJ/pulse and repetition tax of 10 Hz (in the display). It is also objective of this study to check a possible thermic damage to pulp tissue when the roots surfaces are irradiated with Er:YAG laser. We used for this study, five human dental roots, each one of them were cut into four samples, giving us a total of twenty samples, which were divided in five groups of four samples each one. The control group, we did not indicated any kind of treatment. The first group, the roots samples were scaled and planned with Gracey curettes 5/6 and 7/8. The second group, the roots samples were treated with ultrasonic instruments. The third group was irradiated with Er:YAG laser using 60 mJ/pulse , 10 Hz and energy density of 4 J/cm 2 (approximated). The fourth group was irradiated with Er:YAG laser using 100 mJ/pulse, 10 Hz and energy density of 7 J/cm 2 (approximated). The results analysis showed that roots scaling either with Gracey curettes or with ultrasonic instruments created smear layer covering roots surfaces; roots surfaces irradiated with Er:YAG laser showed few roughness in the third group; roots surfaces irradiated with Er:YAG laser showed no smear layer and the Er:YAG laser irradiation did not bring any thermic damage

A New Anatomically Based Nomenclature for the Roots and Root Canals—Part 1: Maxillary Molars

Directory of Open Access Journals (Sweden)

Jojo Kottoor

2012-01-01

Full Text Available Numerous terminologies have been employed in the dental literature to describe the roots and root canal systems of maxillary molars. This multiplicity in naming of roots and canals makes the reader susceptible to misinterpretation and confusion. No consensus thus far has been arrived at for defining the names of roots and root canals in maxillary molars, including their various morphological aberrations. The anatomical relation of roots and their root canals were identified and were subsequently named based on definite sets of criteria. A new method for identification and naming of roots and root canal anatomy in maxillary molars, based on their root and canal relationship, was formulated and is presented in this paper. The nomenclature makes certain essential modifications to the traditional approach to accommodate naming of the various aberrations presented in the maxillary molars. A simple, yet extensive, nomenclature system has been proposed that appropriately names the internal and external morphology of maxillary molars.

A new anatomically based nomenclature for the roots and root canals-part 1: maxillary molars.

Science.gov (United States)

Kottoor, Jojo; Albuquerque, Denzil Valerian; Velmurugan, Natanasabapathy

2012-01-01

Numerous terminologies have been employed in the dental literature to describe the roots and root canal systems of maxillary molars. This multiplicity in naming of roots and canals makes the reader susceptible to misinterpretation and confusion. No consensus thus far has been arrived at for defining the names of roots and root canals in maxillary molars, including their various morphological aberrations. The anatomical relation of roots and their root canals were identified and were subsequently named based on definite sets of criteria. A new method for identification and naming of roots and root canal anatomy in maxillary molars, based on their root and canal relationship, was formulated and is presented in this paper. The nomenclature makes certain essential modifications to the traditional approach to accommodate naming of the various aberrations presented in the maxillary molars. A simple, yet extensive, nomenclature system has been proposed that appropriately names the internal and external morphology of maxillary molars.

Responses of grapevine rootstocks to drought through altered root system architecture and root transcriptomic regulations.

Science.gov (United States)

Yıldırım, Kubilay; Yağcı, Adem; Sucu, Seda; Tunç, Sümeyye

2018-06-01

Roots are the major interface between the plant and various stress factors in the soil environment. Alteration of root system architecture (RSA) (root length, spread, number and length of lateral roots) in response to environmental changes is known to be an important strategy for plant adaptation and productivity. In light of ongoing climate changes and global warming predictions, the breeding of drought-tolerant grapevine cultivars is becoming a crucial factor for developing a sustainable viticulture. Root-trait modeling of grapevine rootstock for drought stress scenarios, together with high-throughput phenotyping and genotyping techniques, may provide a valuable background for breeding studies in viticulture. Here, tree grafted grapevine rootstocks (110R, 5BB and 41B) having differential RSA regulations and drought tolerance were investigated to define their drought dependent root characteristics. Root area, root length, ramification and number of root tips reduced less in 110R grafted grapevines compared to 5BB and 41B grafted ones during drought treatment. Root relative water content as well as total carbohydrate and nitrogen content were found to be much higher in the roots of 110R than it was in the roots of other rootstocks under drought. Microarray-based root transcriptome profiling was also conducted on the roots of these rootstocks to identify their gene regulation network behind drought-dependent RSA alterations. Transcriptome analysis revealed totally 2795, 1196 and 1612 differentially expressed transcripts at the severe drought for the roots of 110R, 5BB and 41B, respectively. According to this transcriptomic data, effective root elongation and enlargement performance of 110R were suggested to depend on three transcriptomic regulations. First one is the drought-dependent induction in sugar and protein transporters genes (SWEET and NRT1/PTR) in the roots of 110R to facilitate carbohydrate and nitrogen accumulation. In the roots of the same rootstock

Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture.

Science.gov (United States)

Sheng, Lihong; Hu, Xiaomei; Du, Yujuan; Zhang, Guifang; Huang, Hai; Scheres, Ben; Xu, Lin

2017-09-01

Lateral roots (LRs), which originate from the growing root, and adventitious roots (ARs), which are formed from non-root organs, are the main contributors to the post-embryonic root system in Arabidopsis However, our knowledge of how formation of the root system is altered in response to diverse inductive cues is limited. Here, we show that WOX11 contributes to root system plasticity. When seedlings are grown vertically on medium, WOX11 is not expressed in LR founder cells. During AR initiation, WOX11 is expressed in AR founder cells and activates LBD16 LBD16 also functions in LR formation and is activated in that context by ARF7 / 19 and not by WOX11 This indicates that divergent initial processes that lead to ARs and LRs may converge on a similar mechanism for primordium development. Furthermore, we demonstrated that when plants are grown in soil or upon wounding on medium, the primary root is able to produce both WOX11 -mediated and non- WOX11 -mediated roots. The discovery of WOX11 -mediated root-derived roots reveals a previously uncharacterized pathway that confers plasticity during the generation of root system architecture in response to different inductive cues. © 2017. Published by The Company of Biologists Ltd.

Analysis of root-knot nematode and fusarium wilt disease resistance in cotton (Gossypium spp.) using chromosome substitution lines from two alien species.

Science.gov (United States)

Ulloa, M; Wang, C; Saha, S; Hutmacher, R B; Stelly, D M; Jenkins, J N; Burke, J; Roberts, P A

2016-04-01

Chromosome substitution (CS) lines in plants are a powerful genetic resource for analyzing the contribution of chromosome segments to phenotypic variance. In this study, a series of interspecific cotton (Gossypium spp.) CS lines were used to identify a new germplasm resource, and to validate chromosomal regions and favorable alleles associated with nematode or fungal disease resistance traits. The CS lines were developed in the G. hirsutum L. TM-1 background with chromosome or chromosome segment substitutions from G. barbadense L. Pima 3-79 or G. tomentosum. Root-knot nematode (Meloidogyne incognita) and fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) (races 1 and 4) resistance alleles and quantitative trait loci (QTL) previously placed on cotton chromosomes using SSR markers in two interspecific recombinant inbred line populations were chosen for testing. Phenotypic responses of increased resistance or susceptibility in controlled inoculation and infested field assays confirmed the resistance QTLs, based on substitution with the positive or negative allele for resistance. Lines CS-B22Lo, CS-B04, and CS-B18 showed high resistance to nematode root-galling, confirming QTLs on chromosomes 4 and 22 (long arm) with resistance alleles from Pima 3-79. Line CS-B16 had less fusarium race 1-induced vascular root staining and higher percent survival than the TM-1 parent, confirming a major resistance QTL on chromosome 16. Lines CS-B(17-11) and CS-B17 had high fusarium race 4 vascular symptoms and low survival due to susceptible alleles introgressed from Pima 3-79, confirming the localization on chromosome 17 of an identified QTL with resistance alleles from TM1 and other resistant lines. Analyses validated regions on chromosomes 11, 16, and 17 harboring nematode and fusarium wilt resistance genes and demonstrated the value of CS lines as both a germplasm resource for breeding programs and as a powerful genetic analysis tool for determining QTL effects for disease

Orthodontic movement of teeth with short root anomaly: should it be avoided, faced or ignored?

Directory of Open Access Journals (Sweden)

Jose Valladares Neto

2013-12-01

Full Text Available INTRODUCTION: Short Root Anomaly (SRA is an uncommon disease and a challenge for orthodontic treatment as it tends to increase the risk of root resorption. OBJECTIVE: Assess the current status of the diagnosis, etiology and orthodontic management of teeth with SRA, and present case reports. METHOD: A literature review was carried out in PubMed, SciELO, LILACS, Scopus and Web of Science databases. RESULTS: A differential diagnosis of SRA should be conducted for teeth with incomplete root formation, external apical root resorption, dentin dysplasia type I and post dental trauma root hypoplasia. SRA is genetically determined and orthodontic movement requires changes in clinical and radiographic management in order to restrict damage. CONCLUSION: Orthodontic movement of teeth with SRA is contraindicated in extreme cases, only. Caution at all stages could minimize attachment loss and lead to long-term stability.

Composite Cucurbita pepo plants with transgenic roots as a tool to study root development.

Science.gov (United States)

Ilina, Elena L; Logachov, Anton A; Laplaze, Laurent; Demchenko, Nikolay P; Pawlowski, Katharina; Demchenko, Kirill N

2012-07-01

In most plant species, initiation of lateral root primordia occurs above the elongation zone. However, in cucurbits and some other species, lateral root primordia initiation and development takes place in the apical meristem of the parental root. Composite transgenic plants obtained by Agrobacterium rhizogenes-mediated transformation are known as a suitable model to study root development. The aim of the present study was to establish this transformation technique for squash. The auxin-responsive promoter DR5 was cloned into the binary vectors pKGW-RR-MGW and pMDC162-GFP. Incorporation of 5-ethynyl-2'-deoxyuridine (EdU) was used to evaluate the presence of DNA-synthesizing cells in the hypocotyl of squash seedlings to find out whether they were suitable for infection. Two A. rhizogenes strains, R1000 and MSU440, were used. Roots containing the respective constructs were selected based on DsRED1 or green fluorescent protein (GFP) fluorescence, and DR5::Egfp-gusA or DR5::gusA insertion, respectively, was verified by PCR. Distribution of the response to auxin was visualized by GFP fluorescence or β-glucuronidase (GUS) activity staining and confirmed by immunolocalization of GFP and GUS proteins, respectively. Based on the distribution of EdU-labelled cells, it was determined that 6-day-old squash seedlings were suited for inoculation by A. rhizogenes since their root pericycle and the adjacent layers contain enough proliferating cells. Agrobacterium rhizogenes R1000 proved to be the most virulent strain on squash seedlings. Squash roots containing the respective constructs did not exhibit the hairy root phenotype and were morphologically and structurally similar to wild-type roots. The auxin response pattern in the root apex of squash resembled that in arabidopsis roots. Composite squash plants obtained by A. rhizogenes-mediated transformation are a good tool for the investigation of root apical meristem development and root branching.

Chromatic roots and hamiltonian paths

DEFF Research Database (Denmark)

Thomassen, Carsten

2000-01-01

We present a new connection between colorings and hamiltonian paths: If the chromatic polynomial of a graph has a noninteger root less than or equal to t(n) = 2/3 + 1/3 (3)root (26 + 6 root (33)) + 1/3 (3)root (26 - 6 root (33)) = 1.29559.... then the graph has no hamiltonian path. This result...

Differences in U root-to-shoot translocation between plant species explained by U distribution in roots

Energy Technology Data Exchange (ETDEWEB)

Straczek, Anne; Duquene, Lise [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium); Wegrzynek, Dariusz [IAEA, Seibersdorf Laboratories, A-2444 Seibersdorf (Austria); Faculty of Physics and Applied Computer Science, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Krakow (Poland); Chinea-Cano, Ernesto [IAEA, Seibersdorf Laboratories, A-2444 Seibersdorf (Austria); Wannijn, Jean [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium); Navez, Jacques [Royal Museum of Africa, Department of Geology, Leuvensesteenweg 13, 3080 Tervuren (Belgium); Vandenhove, Hildegarde, E-mail: hvandenh@sckcen.b [Belgium Nuclear Research Centre (SCK.CEN), Biosphere Impact Studies, Boeretang 200, 2400 Mol (Belgium)

2010-03-15

Accumulation and distribution of uranium in roots and shoots of four plants species differing in their cation exchange capacity of roots (CECR) was investigated. After exposure in hydroponics for seven days to 100 mumol U L{sup -1}, distribution of uranium in roots was investigated through chemical extraction of roots. Higher U concentrations were measured in roots of dicots which showed a higher CECR than monocot species. Chemical extractions indicated that uranium is mostly located in the apoplasm of roots of monocots but that it is predominantly located in the symplasm of roots of dicots. Translocation of U to shoot was not significantly affected by the CECR or distribution of U between symplasm and apoplasm. Distribution of uranium in roots was investigated through chemical extraction of roots for all species. Additionally, longitudinal and radial distribution of U in roots of maize and Indian mustard, respectively showing the lowest and the highest translocation, was studied following X-ray fluorescence (XRF) analysis of specific root sections. Chemical analysis and XRF analysis of roots of maize and Indian mustard clearly indicated a higher longitudinal and radial transport of uranium in roots of Indian mustard than in roots of maize, where uranium mostly accumulated in root tips. These results showed that even if CECR could partly explain U accumulation in roots, other mechanisms like radial and longitudinal transport are implied in the translocation of U to the shoot.

Differences in U root-to-shoot translocation between plant species explained by U distribution in roots

International Nuclear Information System (INIS)

Straczek, Anne; Duquene, Lise; Wegrzynek, Dariusz; Chinea-Cano, Ernesto; Wannijn, Jean; Navez, Jacques; Vandenhove, Hildegarde

2010-01-01

Accumulation and distribution of uranium in roots and shoots of four plants species differing in their cation exchange capacity of roots (CECR) was investigated. After exposure in hydroponics for seven days to 100 μmol U L -1 , distribution of uranium in roots was investigated through chemical extraction of roots. Higher U concentrations were measured in roots of dicots which showed a higher CECR than monocot species. Chemical extractions indicated that uranium is mostly located in the apoplasm of roots of monocots but that it is predominantly located in the symplasm of roots of dicots. Translocation of U to shoot was not significantly affected by the CECR or distribution of U between symplasm and apoplasm. Distribution of uranium in roots was investigated through chemical extraction of roots for all species. Additionally, longitudinal and radial distribution of U in roots of maize and Indian mustard, respectively showing the lowest and the highest translocation, was studied following X-ray fluorescence (XRF) analysis of specific root sections. Chemical analysis and XRF analysis of roots of maize and Indian mustard clearly indicated a higher longitudinal and radial transport of uranium in roots of Indian mustard than in roots of maize, where uranium mostly accumulated in root tips. These results showed that even if CECR could partly explain U accumulation in roots, other mechanisms like radial and longitudinal transport are implied in the translocation of U to the shoot.

Antifungal activity of methanolic root extract of Withania somnifera

African Journals Online (AJOL)

Proff.Adewunmi

remedy for many diseases in various regions of the world, especially in ... For control, 2 mL of DMSO was added to 16 mL of water, and 4 mL of this .... 3E). Since the four organic solvents used for fractionation of methanolic root .... Purification of a Lectin-Like Antifungal Protein from the Medicinal Herb, Withania Somnifera.

Composts containing fluorescent pseudomonads suppress fusarium root and stem rot development on greenhouse cucumber.

Science.gov (United States)

Bradley, Geoffrey G; Punja, Zamir K

2010-11-01

Three composts (Ball, dairy, and greenhouse) were tested for the ability to suppress the development of Fusarium root and stem rot (caused by Fusarium oxysporum f. sp. radicis-cucumerinum) on greenhouse cucumber. Dairy and greenhouse composts significantly reduced disease severity (P = 0.05), while Ball compost had no effect. Assessment of total culturable microbes in the composts showed a positive relationship between disease suppressive ability and total population levels of pseudomonads. In vitro antagonism assays between compost-isolated bacterial strains and the pathogen showed that strains of Pseudomonas aeruginosa exhibited the greatest antagonism. In growth room trials, strains of P. aeruginosa and nonantagonistic Pseudomonas maculicola, plus 2 biocontrol strains of Pseudomonas fluorescens, were tested for their ability to reduce (i) survival of F. oxysporum, (ii) colonization of plants by the pathogen, and (iii) disease severity. Cucumber seedlings grown in compost receiving P. aeruginosa and P. fluorescens had reduced disease severity index scores after 8 weeks compared with control plants without bacteria. Internal stem colonization by F. oxysporum was significantly reduced by P. aeruginosa. The bacteria colonized plant roots at 1.9 × 10(6) ± 0.73 × 10(6) CFU·(g root tissue)-1 and survival was >107 CFU·(g compost)-1 after 6 weeks. The locus for 2,4-diacetylphloroglucinol production was detected by Southern blot analysis and confirmed by PCR. The production of the antibiotic 2,4-diacetylphloroglucinol in liquid culture by P. aeruginosa was confirmed by thin layer chromatography. These results demonstrate that composts containing antibiotic-producing P. aeruginosa have the potential to suppress diseases caused by Fusarium species.

Semiconductor laser irradiation improves root canal sealing during routine root canal therapy

Science.gov (United States)

Hu, Xingxue; Wang, Dashan; Cui, Ting; Yao, Ruyong

2017-01-01

Objective To evaluate the effect of semiconductor laser irradiation on root canal sealing after routine root canal therapy (RCT). Methods Sixty freshly extracted single-rooted human teeth were randomly divided into six groups (n = 10). The anatomic crowns were sectioned at the cementoenamel junction and the remaining roots were prepared endodontically with conventional RCT methods. Groups A and B were irradiated with semiconductor laser at 1W for 20 seconds; Groups C and D were ultrasonically rinsed for 60 seconds as positive control groups; Groups E and F without treatment of root canal prior to RCT as negative control groups. Root canal sealing of Groups A, C and E were evaluated by measurements of apical microleakage. The teeth from Groups B, D and F were sectioned, and the micro-structures were examined with scanning electron microscopy (SEM). One way ANOVA and LSD-t test were used for statistical analysis (α = .05). Results The apical sealing of both the laser irradiated group and the ultrasonic irrigated group were significantly different from the control group (pirrigated group (p>0.5). SEM observation showed that most of the dentinal tubules in the laser irradiation group melted, narrowed or closed, while most of the dentinal tubules in the ultrasonic irrigation group were filled with tooth paste. Conclusion The application of semiconductor laser prior to root canal obturation increases the apical sealing of the roots treated. PMID:28957407

Combining fuzzy set theory and nonlinear stretching enhancement for unsupervised classification of cotton root rot

Science.gov (United States)

Cotton root rot is a destructive disease affecting cotton production. Accurate identification of infected areas within fields is useful for cost-effective control of the disease. The uncertainties caused by various infection stages and newly infected plants make it difficult to achieve accurate clas...

Antifungal genes expressed in transgenic pea (Pisum sativum L.) do not affect root colonization of arbuscular mycorrhizae fungi.

Science.gov (United States)

Kahlon, Jagroop Gill; Jacobsen, Hans-Jörg; Cahill, James F; Hall, Linda M

2017-10-01

Genetically modified crops have raised concerns about unintended consequences on non-target organisms including beneficial soil associates. Pea transformed with four antifungal genes 1-3 β glucanase, endochitinase, polygalacturonase-inhibiting proteins, and stilbene synthase is currently under field-testing for efficacy against fungal diseases in Canada. Transgenes had lower expression in the roots than leaves in greenhouse experiment. To determine the impact of disease-tolerant pea or gene products on colonization by non-target arbuscular mycorrhizae and nodulation by rhizobium, a field trial was established. Transgene insertion, as single gene or stacked genes, did not alter root colonization by arbuscular mycorrhiza fungus (AMF) or root nodulation by rhizobium inoculation in the field. We found no effect of transgenes on the plant growth and performance although, having a dual inoculant with both AMF and rhizobium yielded higher fresh weight shoot-to-root ratio in all the lines tested. This initial risk assessment of transgenic peas expressing antifungal genes showed no deleterious effect on non-target organisms.

Seventeen years of research on genetics of resistance to Aphanomyces root rot of pea

Science.gov (United States)

Aphanomyces root rot, caused by the oomycete Aphanomyces euteiches, is a major soil borne disease of pea in many countries. Genetic resistance is considered to be a main way to control the disease. Since 2000, INRA has engaged a long-term research program to study genetic resistance to A. euteiches ...

Creating prescription maps from satellite imagery for site-specific management of cotton root rot

Science.gov (United States)

Cotton root rot is a century-old cotton disease that can now be controlled with Topguard Terra Fungicide. However, as this disease tends to occur in the same general areas within fields year after year, site-specific treatment can be more effective and economical. The objective of this study was to ...

Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment

Directory of Open Access Journals (Sweden)

Gang Gao

2017-12-01

Full Text Available Ramie (Boehmeria nivea (L. Gaud. is a traditionally terrestrial fiber crop. However, hydroponic technology can enhance the quantity and quality of disease free Ramie plant seedlings for field cultivation. To date, few studies have attempted to examine the hydroponic induction of ramie roots and the molecular responses of ramie roots to aquatic environment. In this study, ramie tender stems was grown in the soil or in a hydroponic water solution, and cultured in the same environmental conditions. Root samples of terrestrial ramie, and different developmental stages of hydroponic ramie (5 days, 30 days, were firstly pooled for reference transcriptome sequencing by Illumina Hiseq 2000. Gene expression levels of each samples were quantified using the BGISEQ500 platform to help understand the distribution of aquatic root development related genes at the macro level (GSE98903. Our data resources provided an opportunity to elucidate the adaptation mechanisms of ramie seedlings roots in aquatic environment.

RootAnalyzer: A Cross-Section Image Analysis Tool for Automated Characterization of Root Cells and Tissues.

Directory of Open Access Journals (Sweden)

Joshua Chopin

Full Text Available The morphology of plant root anatomical features is a key factor in effective water and nutrient uptake. Existing techniques for phenotyping root anatomical traits are often based on manual or semi-automatic segmentation and annotation of microscopic images of root cross sections. In this article, we propose a fully automated tool, hereinafter referred to as RootAnalyzer, for efficiently extracting and analyzing anatomical traits from root-cross section images. Using a range of image processing techniques such as local thresholding and nearest neighbor identification, RootAnalyzer segments the plant root from the image's background, classifies and characterizes the cortex, stele, endodermis and epidermis, and subsequently produces statistics about the morphological properties of the root cells and tissues. We use RootAnalyzer to analyze 15 images of wheat plants and one maize plant image and evaluate its performance against manually-obtained ground truth data. The comparison shows that RootAnalyzer can fully characterize most root tissue regions with over 90% accuracy.

MAIL1 is essential for development of the primary root but not of anchor roots

OpenAIRE

Ühlken, Christine; Hoth, Stefan; Weingartner, Magdalena

2014-01-01

MAIN-LIKE1 (MAIL1) is a ubiquitously expressed nuclear protein, which has a crucial function during root development. We have recently described loss of function mutants for MAIL1, in which the organization and function of the primary root meristem is lost soon after germination. Moreover cell differentiation is impaired resulting in primary root growth arrest soon after emergence. Here we show that mail1 mutants form several anchor roots from the hypocotyl to root junction. These anchor root...

Root rots of common and tepary beans in Puerto Rico

Science.gov (United States)

Root rots are a disease complex affecting common bean and can be severe in bean growing areas in the tropics and subtropics. The presence of several pathogens makes it difficult to breed for resistance because of the synergistic effect of the pathogens in the host and the interaction of soil factors...

Effects of fine root length density and root biomass on soil preferential flow in forest ecosystems

Directory of Open Access Journals (Sweden)

Yinghu Zhang

2015-04-01

Full Text Available Aim of study: The study was conducted to characterize the impacts of plant roots systems (e.g., root length density and root biomass on soil preferential flow in forest ecosystems. Area of study: The study was carried out in Jiufeng National Forest Park, Beijing, China. Material and methods: The flow patterns were measured by field dye tracing experiments. Different species (Sophora japonica Linn,Platycladus orientalis Franco, Quercus dentata Thunbwere quantified in two replicates, and 12 soil depth were applied. Plant roots were sampled in the sieving methods. Root length density and root biomass were measured by WinRHIZO. Dye coverage was implied in the image analysis, and maximum depth of dye infiltration by direct measurement. Main results: Root length density and root biomass decreased with the increasing distance from soil surface, and root length density was 81.6% higher in preferential pathways than in soil matrix, and 66.7% for root biomass with respect to all experimental plots. Plant roots were densely distributed in the upper soil layers. Dye coverage was almost 100% in the upper 5-10 cm, but then decreased rapidly with soil depth. Root length density and root biomass were different from species: Platycladus orientalis Franco > Quercus dentata Thunb > Sophora japonica Linn. Research highlights: The results indicated that fine roots systems had strong effects on soil preferential flow, particularly root channels enhancing nutrition transport across soil profiles in forest dynamics.

In vitro comparison of different 24% EDTA gel formulations efficacy on root surface conditioning

OpenAIRE

Sousa, Cliciane Portela; Frizzera, Fausto; Batista, Luiz Henrique Carvalho; Dantas, Andrea Abi Rached; Zandim-Barcelos, Daniela Leal; Sampaio, José Eduardo Cezar

2013-01-01

INTRODUCTION: The main goal of root biomodification is to modify the root surface in order to improve the repair of periodontal tissues destroyed by periodontal disease. OBJECTIVE: To evaluate the conditioning efficacy of 24% EDTA gel of different trademarks, considering the variables time and application method, by scanning electron microscopy. MATERIAL AND METHOD: 225 samples were randomly assigned to five groups: sterile saline solution (control); 24% EDTA (Santa Paula Pharmacy); 24% EDTA-...

Asparagus Root Regulates Cholesterol Metabolism and Improves Antioxidant Status in Hypercholesteremic Rats

Directory of Open Access Journals (Sweden)

Nishant P. Visavadiya

2009-01-01

Full Text Available Hyperlipidemia/hypercholesteremia are major risk factors for atherosclerosis and cardiovascular diseases. Root of Asparagus racemosus (AR is widely used in Ayurvedic system of medicine in India and is known for its steroidal saponin content. This study was designed to investigate the hypocholesteremic and antioxidant potential of AR root in both normo- and hypercholesteremic animals. Normal and hypercholesteremic male albino rats were administered with root powder of AR (5 and 10 g% dose levels along with normal and hypercholesteremic diets, respectively, for a duration of 4 weeks. Plasma and hepatic lipid profiles, fecal sterol, bile acid excretion and hepatic antioxidant activity were assessed. Inclusion of AR root powder in diet, resulted in a dose-dependant reduction in plasma and hepatic lipid profiles, increased fecal excretion of cholesterol, neutral sterol and bile acid along with increases in hepatic HMG-CoA reductase activity and bile acid content in hypercholesteremic rats. Further, AR root also improved the hepatic antioxidant status (catalase, SOD and ascorbic acid levels. No significant changes in lipid and antioxidant profiles occurred in the normocholesteremic rats administered with AR root powder. AR root appeared to be useful as a dietary supplement that offers a protection against hyperlipidemia/hypercholesteremia in hypercholesteremic animals. The results of the present study indicate that the potent therapeutic phyto-components present in AR root i.e. phytosterols, saponins, polyphenols, flavonoids and ascorbic acid, could be responsible for increased bile acid production, elimination of excess cholesterol and elevation of hepatic antioxidant status in hypercholesteremic conditions.

Changes in lumbosacral spinal nerve roots on diffusion tensor imaging in spinal stenosis

OpenAIRE

Zhong-jun Hou; Yong Huang; Zi-wen Fan; Xin-chun Li; Bing-yi Cao

2015-01-01

Lumbosacral degenerative disc disease is a common cause of lower back and leg pain. Conventional T1-weighted imaging (T1WI) and T2-weighted imaging (T2WI) scans are commonly used to image spinal cord degeneration. However, these modalities are unable to image the entire lumbosacral spinal nerve roots. Thus, in the present study, we assessed the potential of diffusion tensor imaging (DTI) for quantitative assessment of compressed lumbosacral spinal nerve roots. Subjects were 20 young healthy v...

Phytophthora cinnamon causing stem canker and root rot of nursery-grown Platanus × acerifolia: first report in the Northern emisphere

Directory of Open Access Journals (Sweden)

Massimo PILOTTI

2014-05-01

Full Text Available Lethal stem and root cankers were observed in nursery-grown Platanus × acerifolia trees in Rome. Externally, canker lesions appeared as bluish or blackish areas starting from the stem base and extending upward. Inner bark was necrotised. In some cases an irregularly-shaped callus reaction attempted to heal the bark lesions. Black-stained necrosis affected the primary roots and the small branch roots to different degrees. The presence of Ceratocystis platani was excluded in the diseased trees. Phytophthora-like organisms were isolated from the altered tissue. Morphological and ITS-region-based analyses identified the isolates as Phytophthora cinnamomi. A pathogenicity test confirmed P. cinnamomi as the causal agent of the disease here defined as: stem canker and root rot of plane tree. This is the first report of P. cinnamomi in Platanus spp. in the Northern emisphere.

Differential effects of fine root morphology on water dynamics in the root-soil interface

Science.gov (United States)

DeCarlo, K. F.; Bilheux, H.; Warren, J.

2017-12-01

Soil water uptake form plants, particularly in the rhizosphere, is a poorly understood question in the plant and soil sciences. Our study analyzed the role of belowground plant morphology on soil structural and water dynamics of 5 different plant species (juniper, grape, maize, poplar, maple), grown in sandy soils. Of these, the poplar system was extended to capture drying dynamics. Neutron radiography was used to characterize in-situ dynamics of the soil-water-plant system. A joint map of root morphology and soil moisture was created for the plant systems using digital image processing, where soil pixels were connected to associated root structures via minimum distance transforms. Results show interspecies emergent behavior - a sigmoidal relationship was observed between root diameter and bulk/rhizosphere soil water content difference. Extending this as a proxy for extent of rhizosphere development with root age, we observed a logistic growth pattern for the rhizosphere: minimal development in the early stages is superceded by rapid onset of rhizosphere formation, which then stabilizes/decays with the likely root suberization. Dynamics analysis of water content differences between the root/rhizosphere, and rhizosphere/bulk soil interface highlight the persistently higher water content in the root at all water content and root size ranges. At the rhizosphere/bulk soil interface, we observe a shift in soil water dynamics by root size: in super fine roots, we observe that water content is primarily lower in the rhizosphere under wetter conditions, which then gradually increases to a relatively higher water content under drier conditions. This shifts to a persistently higher rhizosphere water content relative to bulk soil in both wet/dry conditions with increased root size, suggesting that, by size, the finest root structures may contribute the most to total soil water uptake in plants.

Evaluation and Comparison of the Position of the Apical Constriction in Single-root and Multiple-root Teeth

Directory of Open Access Journals (Sweden)

Alireza Farhad

2017-12-01

Full Text Available Introduction: Precise knowledge of the location of the apical constriction is essential to root canal treatment and long-term prognosis. Considering the differences in the apical constriction and size of the roots in single- and multiple-root teeth in various races, examination and comparison of the location of the apical constriction in single-root and multiple-root teeth are of paramount importance. The present studies aimed to measure and compare the distance of the apical constriction from the apical foramen and anatomical apex in single-root and multiple-root teeth. Materials and Methods: In this cross-sectional study, 60 roots of single-rooted teeth and 60 roots of multiple-rooted teeth were collected from the patients referring to the health centers in Isfahan, Iran. After cleansing and disinfecting the surface of the roots, the surface of the teeth was washed with hypochlorite. Based on the direction of the apical foramen, a longitudinal cut was made in the same direction, and the roots were examined microscopically at the magnification of 25. Following that, the distance of the apical constriction from the apical foramen and anatomical apex was measured using a digital camera. In addition, mean and standard deviation of the obtained distance values were determined. Distances in the single-root and multiple-root teeth were compared using independent t-test, at the significance level of Results: Mean distance between the apical constriction and apical foramen was 0.86±0.33 mm in the single-root teeth and 0.072±0.27 mm in the multiple-root teeth. Mean distance between the apical constriction and anatomical apex was 1.14±0.36 mm in the single-root teeth and 1.03±0.36 mm in the multiple-root teeth. Moreover, the results of independent t-test showed the distance of the apical constriction from the apical foramen to be significant between single-root and multiple-rooted teeth (P=0.013. However, the distance between the apical constriction

Impacts of previous crops on Fusarium foot and root rot, and on yields of durum wheat in North West Tunisia

Directory of Open Access Journals (Sweden)

Samia CHEKALI

2016-07-01

Full Text Available The impacts of ten previous crop rotations (cereals, legumes and fallow on Fusarium foot and root rot of durum wheat were investigated for three cropping seasons in a trial established in 2004 in Northwest Tunisia. Fungi isolated from the roots and stem bases were identified using morphological and molecular methods, and were primarily Fusarium culmorum and F. pseudograminearum. Under low rainfall conditions, the previous crop affected F. pseudograminearum incidence on durum wheat roots but not F. culmorum. Compared to continuous cropping of durum wheat, barley as a previous crop increased disease incidence more than fivefold, while legumes and fallow tended to reduce incidence.  Barley as a previous crop increased wheat disease severity by 47%, compared to other rotations. Grain yield was negatively correlated with the incidence of F. culmorum infection, both in roots and stem bases, and fitted an exponential model (R2 = -0.61 for roots and -0.77 for stem bases, P<0.0001. Fusarium pseudograminearum was also negatively correlated with yield and fitted an exponential model (R2 = -0.53 on roots and -0.71 on stem bases, P < 0.0001 but was not correlated with severity.

Impact of aortic root size on left ventricular afterload and stroke volume.

Science.gov (United States)

Sahlén, Anders; Hamid, Nadira; Amanullah, Mohammed Rizwan; Fam, Jiang Ming; Yeo, Khung Keong; Lau, Yee How; Lam, Carolyn S P; Ding, Zee Pin

2016-07-01

The left ventricle (LV) ejects blood into the proximal aorta. Age and hypertension are associated with stiffening and dilation of the aortic root, typically viewed as indicative of adverse remodeling. Based on analytical considerations, we hypothesized that a larger aortic root should be associated with lower global afterload (effective arterial elastance, EA) and larger stroke volume (SV). Moreover, as antihypertensive drugs differ in their effect on central blood pressure, we examined the role of antihypertensive drugs for the relation between aortic root size and afterload. We studied a large group of patients (n = 1250; 61 ± 12 years; 78 % males; 64 % hypertensives) from a single-center registry with known or suspected coronary artery disease. Aortic root size was measured by echocardiography as the diameter of the tubular portion of the ascending aorta. LV outflow tract Doppler was used to record SV. In the population as a whole, after adjusting for key covariates in separate regression models, aortic root size was an independent determinant of both SV and EA. This association was found to be heterogeneous and stronger in patients taking a calcium channel blocker (CCB; 10.6 % of entire population; aortic root size accounted for 8 % of the explained variance of EA). Larger aortic root size is an independent determinant of EA and SV. This association was heterogeneous and stronger in patients on CCB therapy.

Effect of corn steep liquor on lettuce root rot (Fusarium oxysporum f.sp. lactucae) in hydroponic cultures.

Science.gov (United States)

Chinta, Yufita D; Kano, Kazuki; Widiastuti, Ani; Fukahori, Masaru; Kawasaki, Shizuka; Eguchi, Yumi; Misu, Hideyuki; Odani, Hiromitsu; Zhou, Songying; Narisawa, Kazuhiko; Fujiwara, Kazuki; Shinohara, Makoto; Sato, Tatsuo

2014-08-01

Recent reports indicate that organic fertilisers have a suppressive effect on the pathogens of plants grown under hydroponic systems. Furthermore, microorganisms exhibiting antagonistic activity to diseases have been observed in organic hydroponic systems. This study evaluated the effect of corn steep liquor (CSL) on controlling lettuce root rot disease [Fusarium oxysporum f.sp. lactucae (FOL)] in a hydroponic system. The effect of CSL and Otsuka A (a chemical fertiliser) on the inhibition of FOL in terms of mycelial growth inhibition was tested in vivo. Addition of CSL suppressed FOL infection rates. CSL inhibited FOL infection by 26.3-42.5% from 2 days after starting incubation. In comparison, Otsuka A inhibited FOL growth by 5.5-19.4%. In addition, four of 10 bacteria isolated from the nutrient media containing CSL exhibited inhibition zones preventing FOL mycelial growth. We found that CSL suppressed FOL in lettuce via its antifungal and biostimulatory effects. We suggest that activation of beneficial microorganisms present in CSL may be used to decrease lettuce root rot disease and contribute to lettuce root growth. © 2014 Society of Chemical Industry.

Episodic abiotic stress and Phytophthora ramorum blight in rhododendron: impacts on root infection, symptom expression and chemical management

Science.gov (United States)

Tatiana Roubtsova; Richard Bostock

2013-01-01

Of concern for disease management and certification programs in nursery ornamentals is that roots, when colonized by Phytophthora ramorum, may serve as a potential reservoir of inoculum. An additional complication is that the above ground portion of plants with root infections may be asymptomatic. Our central hypothesis is that mild abiotic...

Changes of Root Length and Root-to-Crown Ratio after Apical Surgery

DEFF Research Database (Denmark)

von Arx, Thomas; Jensen, Simon S; Bornstein, Michael M

2015-01-01

INTRODUCTION: Apical surgery is an important treatment option for teeth with post-treatment periodontitis. Although apical surgery involves root-end resection, no morphometric data are yet available about root-end resection and its impact on the root-to-crown ratio (RCR). The present study assess...

Deep rooting conferred by DEEPER ROOTING 1 enhances rice yield in paddy fields.

Science.gov (United States)

Arai-Sanoh, Yumiko; Takai, Toshiyuki; Yoshinaga, Satoshi; Nakano, Hiroshi; Kojima, Mikiko; Sakakibara, Hitoshi; Kondo, Motohiko; Uga, Yusaku

2014-07-03

To clarify the effect of deep rooting on grain yield in rice (Oryza sativa L.) in an irrigated paddy field with or without fertilizer, we used the shallow-rooting IR64 and the deep-rooting Dro1-NIL (a near-isogenic line homozygous for the Kinandang Patong allele of DEEPER ROOTING 1 (DRO1) in the IR64 genetic background). Although total root length was similar in both lines, more roots were distributed within the lower soil layer of the paddy field in Dro1-NIL than in IR64, irrespective of fertilizer treatment. At maturity, Dro1-NIL showed approximately 10% higher grain yield than IR64, irrespective of fertilizer treatment. Higher grain yield of Dro1-NIL was mainly due to the increased 1000-kernel weight and increased percentage of ripened grains, which resulted in a higher harvest index. After heading, the uptake of nitrogen from soil and leaf nitrogen concentration were higher in Dro1-NIL than in IR64. At the mid-grain-filling stage, Dro1-NIL maintained higher cytokinin fluxes from roots to shoots than IR64. These results suggest that deep rooting by DRO1 enhances nitrogen uptake and cytokinin fluxes at late stages, resulting in better grain filling in Dro1-NIL in a paddy field in this study.

Effect of the association between citric acid and EDTA on root surface etching.

Science.gov (United States)

Manzolli Leite, Fabio Renato; Nascimento, Gustavo Giacomelli; Manzolli Leite, Elza Regina; Leite, Amauri Antiquera; Cezar Sampaio, Josá Eduardo

2013-09-01

This study aims to compare the clot stabilization on root surfaces conditioned with citric acid and ethylenediamine-tetraacetic acid (EDTA). Scaled root samples (n = 100) were set in fve groups: group I-control group (saline solution); group II (24% EDTA); group III (25% citric acid); group IV (EDTA + citric acid); group V (citric acid + EDTA). Fifty samples were assessed using the root surface modifcation index (RSMI). The other 50 received a blood drop after conditioning. Clot formation was assessed using blood elements adhesion index (BEAI). A blind examiner evaluated photomicrographs. Statistical analysis considered p EDTA employment before citric acid (group-IV) reduced clot formation in comparison to citric acid use alone (group-III). Root conditioning with citric acid alone and before EDTA had the best results for smear layer removal and clot stabilization. EDTA inhibited clot stabilization on root surface and must have a residual activity once it has diminished clot adhesion to root even after citric acid conditioning. Thus, EDTA can be used to neutralize citric acid effects on periodontal cells without affecting clot stabilization. Clinical signifcance: To demonstrate that citric acid use on root surfaces previously affected by periodontal disease may favor clot stabilization and may have a benefcial effect on surgical outcomes. Also, EDTA can be used to neutralize citric acid effects on periodontal cells.

Pea-root exudates and their effect upon root-nodule bacteria

NARCIS (Netherlands)

Egeraat, van A.W.S.M.

1972-01-01

The main purpose of this investigation was to study the exudation (mechanism, sites) of various compounds by roots of pea seedlings in relation to the growth of Rhizobium leguminosarum.

Chapter 1 gives a survey of the literature pertaining to plant-root

Proteomics of Maize Root Development.

Science.gov (United States)

Hochholdinger, Frank; Marcon, Caroline; Baldauf, Jutta A; Yu, Peng; Frey, Felix P

2018-01-01

Maize forms a complex root system with structurally and functionally diverse root types that are formed at different developmental stages to extract water and mineral nutrients from soil. In recent years proteomics has been intensively applied to identify proteins involved in shaping the three-dimensional architecture and regulating the function of the maize root system. With the help of developmental mutants, proteomic changes during the initiation and emergence of shoot-borne, lateral and seminal roots have been examined. Furthermore, root hairs were surveyed to understand the proteomic changes during the elongation of these single cell type structures. In addition, primary roots have been used to study developmental changes of the proteome but also to investigate the proteomes of distinct tissues such as the meristematic zone, the elongation zone as well as stele and cortex of the differentiation zone. Moreover, subcellular fractions of the primary root including cell walls, plasma membranes and secreted mucilage have been analyzed. Finally, the superior vigor of hybrid seedling roots compared to their parental inbred lines was studied on the proteome level. In summary, these studies provide novel insights into the complex proteomic interactions of the elaborate maize root system during development.

Proteomics of Maize Root Development

Directory of Open Access Journals (Sweden)

Frank Hochholdinger

2018-03-01

Full Text Available Maize forms a complex root system with structurally and functionally diverse root types that are formed at different developmental stages to extract water and mineral nutrients from soil. In recent years proteomics has been intensively applied to identify proteins involved in shaping the three-dimensional architecture and regulating the function of the maize root system. With the help of developmental mutants, proteomic changes during the initiation and emergence of shoot-borne, lateral and seminal roots have been examined. Furthermore, root hairs were surveyed to understand the proteomic changes during the elongation of these single cell type structures. In addition, primary roots have been used to study developmental changes of the proteome but also to investigate the proteomes of distinct tissues such as the meristematic zone, the elongation zone as well as stele and cortex of the differentiation zone. Moreover, subcellular fractions of the primary root including cell walls, plasma membranes and secreted mucilage have been analyzed. Finally, the superior vigor of hybrid seedling roots compared to their parental inbred lines was studied on the proteome level. In summary, these studies provide novel insights into the complex proteomic interactions of the elaborate maize root system during development.

Effects of damping-off caused by Rhizoctonia solani anastomosis group 2-1 on roots of wheat and oil seed rape quantified using X-ray Computed Tomography and real-time PCR

Directory of Open Access Journals (Sweden)

Craig J. Sturrock

2015-06-01

Full Text Available Rhizoctonia solani is a plant pathogenic fungus that causes significant establishment and yield losses to several important food crops globally. This is the first application of high resolution X-ray micro Computed Tomography (X-ray µCT and real-time PCR to study host-pathogen interactions in situ and elucidate the mechanism of Rhizoctonia damping-off disease over a 6-day period caused by R. solani, anastomosis group (AG 2-1 in wheat (Triticum aestivum cv. Gallant and oil seed rape (OSR, Brassica napus cv. Marinka. Temporal, non-destructive analysis of root system architectures was performed using RooTrak and validated by the destructive method of root washing. Disease was assessed visually and related to pathogen DNA quantification in soil using real-time PCR. R. solani AG2-1 at similar initial DNA concentrations in soil was capable of causing significant damage to the developing root systems of both wheat and OSR. Disease caused reductions in primary root number, root volume, root surface area and convex hull which were affected less in the monocotyledonous host. Wheat was more tolerant to the pathogen, exhibited fewer symptoms and developed more complex root system. In contrast, R. solani caused earlier damage and maceration of the taproot of the dicot, OSR. Disease severity was related to pathogen DNA accumulation in soil only for OSR, however reductions in root traits were significantly associated with both disease and pathogen DNA. The method offers the first steps in advancing current understanding of soil-borne pathogen behaviour in situ at the pore scale, which may lead to the development of mitigation measures to combat disease influence in the field.

ROOT Tutorial for Summer Students

CERN Multimedia

CERN. Geneva; Piparo, Danilo

2015-01-01

ROOT is a "batteries-included" tool kit for data analysis, storage and visualization. It is widely used in High Energy Physics and other disciplines such as Biology, Finance and Astrophysics. This event is an introductory tutorial to ROOT and comprises a front lecture and hands on exercises. IMPORTANT NOTE: The tutorial is based on ROOT 6.04 and NOT on the ROOT5 series.  IMPORTANT NOTE: if you have ROOT 6.04 installed on your laptop, you will not need to install any virtual machine. The instructions showing how to install the virtual machine on which you can find ROOT 6.04 can be found under "Material" on this page.

The anatomy of the first sacral nerve root sheath shown by computed tomography.

Science.gov (United States)

Moore, N R; Dixon, A K; Freer, C E

1989-08-01

Analysis of 25 patients with normal computed tomographic appearances at the lumbosacral junction revealed wide variation in the anatomical level at which the first sacral nerve root sheaths were seen emerging from the theca. In nine patients (36%), the S1 nerve root sheaths were first recognized at the level of the lumbosacral disc. In 14 patients (56%), the sheaths emerged cranial to the disc; it is possible that these patients may be more prone to neurological complications related to disc or facet joint disease, especially if the sheath is laterally sited within the lateral recess. Conversely, that minority of patients (two, 8%) in whom the root sheaths emerge caudal to the disc level may be relatively protected from neurological complications.

Antioxidant Activity of Essential Oil and Extracts of Valeriana jatamansi Roots

Directory of Open Access Journals (Sweden)

Sakshima Thusoo

2014-01-01

Full Text Available Valeriana jatamansi is an indigenous medicinal plant used in the treatment of a number of diseases. In the present study, chemical composition of the essential oil was determined by GC-MS. Seven major components were identified in Valeriana jatamansi essential oil, namely, β-vatirenene, β-patchoulene, dehydroaromadendrene, β-gurjunene, patchoulic alcohol, β-guaiene, and α-muurolene. Methanolic, aqueous, and chloroform extracts of Valeriana jatamansi roots were also prepared and analyzed for their polyphenols and flavonoid content. Antioxidant activity of essential oil and different extracts of Valeriana jatamansi roots was determined by DPPH radical scavenging and chelation power assay. A linear correlation has been obtained by comparing the antioxidant activity and polyphenols and flavonoid content of the extracts. Results indicated that antioxidant activity of methanolic extract could be attributed to the presence of rich amount of polyphenols and flavonoid. Essential oil of Valeriana jatamansi roots showed moderate antioxidant activity.

Endoscopic root canal treatment.

Science.gov (United States)

Moshonov, Joshua; Michaeli, Eli; Nahlieli, Oded

2009-10-01

To describe an innovative endoscopic technique for root canal treatment. Root canal treatment was performed on 12 patients (15 teeth), using a newly developed endoscope (Sialotechnology), which combines an endoscope, irrigation, and a surgical microinstrument channel. Endoscopic root canal treatment of all 15 teeth was successful with complete resolution of all symptoms (6-month follow-up). The novel endoscope used in this study accurately identified all microstructures and simplified root canal treatment. The endoscope may be considered for use not only for preoperative observation and diagnosis but also for active endodontic treatment.

On the road to quantitative genetic/genomic analyses of root growth and development components underlying root architecture

International Nuclear Information System (INIS)

Draye, X.; Dorlodot, S. de; Lavigne, T.

2006-01-01

The quantitative genetic and functional genomic analyses of root development, growth and plasticity will be instrumental in revealing the major regulatory pathways of root architecture. Such knowledge, combined with in-depth consideration of root physiology (e.g. uptake, exsudation), form (space-time dynamics of soil exploration) and ecology (including root environment), will settle the bases for designing root ideotypes for specific environments, for low-input agriculture or for successful agricultural production with minimal impact on the environment. This report summarizes root research initiated in our lab between 2000 and 2004 in the following areas: quantitative analysis of root branching in bananas, high throughput characterisation of root morphology, image analysis, QTL mapping of detailed features of root architecture in rice, and attempts to settle a Crop Root Research Consortium. (author)

Simulating root carbon storage with a coupled carbon — Water cycle root model

Science.gov (United States)

Kleidon, A.; Heimann, M.

1996-12-01

Is it possible to estimate carbon allocation to fine roots from the water demands of the vegetation? We assess this question by applying a root model which is based on optimisation principles. The model uses a new formulation of water uptake by fine roots, which is necessary to explicitly take into account the highly dynamic and non-steady process of water uptake. Its carbon dynamics are driven by maximising the water uptake while keeping maintenance costs at a minimum. We apply the model to a site in northern Germany and check averaged vertical fine root biomass distribution against measured data. The model reproduces the observed values fairly well and the approach seems promising. However, more validation is necessary, especially on the predicted dynamics of the root biomass.

Physical root-soil interactions

Science.gov (United States)

Kolb, Evelyne; Legué, Valérie; Bogeat-Triboulot, Marie-Béatrice

2017-12-01

Plant root system development is highly modulated by the physical properties of the soil and especially by its mechanical resistance to penetration. The interplay between the mechanical stresses exerted by the soil and root growth is of particular interest for many communities, in agronomy and soil science as well as in biomechanics and plant morphogenesis. In contrast to aerial organs, roots apices must exert a growth pressure to penetrate strong soils and reorient their growth trajectory to cope with obstacles like stones or hardpans or to follow the tortuous paths of the soil porosity. In this review, we present the main macroscopic investigations of soil-root physical interactions in the field and combine them with simple mechanistic modeling derived from model experiments at the scale of the individual root apex.

Root Hydraulics and Root Sap Flow in a Panamanian Low-Land Tropical Forest

Science.gov (United States)

Bretfeld, M.; Ewers, B. E.; Hall, J. S.; Ogden, F. L.; Beverly, D.; Speckman, H. N.

2017-12-01

In the tropics, trees are subjected to increasingly frequent and severe droughts driven by climate change. Given the hydrological benefits associated with tropical forests, such as reduced peak runoff during high precipitation events and increased base flow during drought periods ("sponge-effect"), the underlying plant-hydrological processes at the soil-plant interface have become the focus of recent research efforts. In Panama, the 2015/16 El Niño-Southern Oscillation (ENSO) event ranks amongst the driest and hottest periods on record, thus providing an excellent opportunity to study the effects of drought on tropical forests. Starting in 2015, we instrumented 76 trees with heat-ratio sap flow sensors in regrowing secondary forest (8-, 25-, and 80-year old stands) in the 15 km2 Agua Salud study area, located in central Panama. Of those trees, 16 individuals were instrumented with additional sap flow sensors on three roots each. Data were logged every 30 minutes and soil moisture was measured at 10, 30, 50, and 100 cm depth. Meteorological data were taken from a nearby met-station. Rooting depth and root density were assessed in eight 2×2×2 m soil pits. In April 2017, we measured hydraulic conductance and vulnerability to cavitation of eight species using the centrifuge technique. Trees in 8-year old forest limited transpiration during the drought whereas no such limitation was evident in trees of the 80-year old forest. Root sap flow data show seasonal shifts in water uptake between individual roots of a given tree, with sap flow decreasing in some roots while simultaneously increasing in other roots during the wet-dry season transition. Roots followed a typical log distribution along the profile, with overall root densities of 46, 43, and 52 roots m-2 in the 8-, 25-, and 80-yo stand, respectively. Roots were found up to 200 cm depth in all forests, with roots >5 cm occurring at lower depths (>125 cm) only in 25- and 80-year old forests. Maximum hydraulic

The "Green" Root Beer Laboratory

Science.gov (United States)

Clary, Renee; Wandersee, James

2010-01-01

No, your students will not be drinking green root beer for St. Patrick's Day--this "green" root beer laboratory promotes environmental awareness in the science classroom, and provides a venue for some very sound science content! While many science classrooms incorporate root beer-brewing activities, the root beer lab presented in this article has…

Analysis of gene expression profiles for cell wall modifying proteins and ACC synthases in soybean cyst nematode colonized roots, adventitious rooting hypocotyls, root tips, flooded roots, and IBA and ACC treatment roots

Science.gov (United States)

We hypothesized that soybean cyst nematode (SCN) co-opts a part or all of one or more innate developmental process in soybean to establish its feeding structure, syncytium, in soybean roots. The syncytium in soybean roots is formed in a predominantly lateral direction within the vascular bundle by ...

Using coloured roots to study root interaction and competition in intercropped legumes and non-legumes

DEFF Research Database (Denmark)

Tosti, Giacomo; Thorup-Kristensen, Kristian

2010-01-01

if a species with coloured roots can be used to examine the interaction in a legume-non-legume intercropping system; (ii) to verify the importance of initial root growth on the successive root development of mixture component plants; (iii) to test if the root interaction in the shallow layers has consequences...

Removal of root filling materials.

LENUS (Irish Health Repository)

Duncan, H.F. Chong, B.S.

2011-05-01

Safe, successful and effective removal of root filling materials is an integral component of non-surgical root canal re-treatment. Access to the root canal system must be achieved in order to negotiate to the canal terminus so that deficiencies in the original treatment can be rectified. Since a range of materials have been advocated for filling root canals, different techniques are required for their removal. The management of commonly encountered root filling materials during non-surgical re-treatment, including the clinical procedures necessary for removal and the associated risks, are reviewed. As gutta-percha is the most widely used and accepted root filling material, there is a greater emphasis on its removal in this review.

Varicella Zoster Virus and Internal Root Resorption: A Case Report.

Science.gov (United States)

Talebzadeh, Bita; Rahimi, Saeed; Abdollahi, Amir Ardalan; Nouroloyuni, Ahmad; Asghari, Vahide

2015-08-01

Herpes zoster is a viral infection caused by the reactivation of the varicella zoster virus. One of the less well-recognized maxillofacial complications is tooth root resorption. To our knowledge, this is the first case report about internal resorption associated with varicella zoster virus involving different dental quadrants. A 38-year-old woman presented with internal resorption of maxillary canine and first premolar tooth roots on the right quadrant and generalized internal resorption of second molars of both mandibular quadrants. The patient's medical history showed mild oral lichen planus and infection with varicella zoster virus (chickenpox) with severe clinical manifestations 5 years previously. The patient developed diabetes mellitus type I and hypothyroidism a short time after varicella zoster virus infection, and by the time of infection with this virus, oral lichen planus had progressed from the reticular pattern to the generalized severe erosive form. Viral etiology could also be considered in these diseases. The root canals of the affected teeth were debrided, irrigated, and dried, and calcium hydroxide paste was placed in the root canals for a week during the first treatment session. The root canals were obturated during the second session. Six-month follow-up showed improvement of oral lichen planus and resolution of widening of periodontal ligament of the affected teeth, with follow-up radiographs revealing no periapical problems. It appears some cases of internal root resorption classified as idiopathic might have viral etiology. Therefore, it is recommended that patients be questioned about a history of chickenpox and herpes zoster. Copyright © 2015 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.

Tree-root control of shallow landslides

Science.gov (United States)

Cohen, Denis; Schwarz, Massimiliano

2017-08-01

Tree roots have long been recognized to increase slope stability by reinforcing the strength of soils. Slope stability models usually include the effects of roots by adding an apparent cohesion to the soil to simulate root strength. No model includes the combined effects of root distribution heterogeneity, stress-strain behavior of root reinforcement, or root strength in compression. Recent field observations, however, indicate that shallow landslide triggering mechanisms are characterized by differential deformation that indicates localized activation of zones in tension, compression, and shear in the soil. Here we describe a new model for slope stability that specifically considers these effects. The model is a strain-step discrete element model that reproduces the self-organized redistribution of forces on a slope during rainfall-triggered shallow landslides. We use a conceptual sigmoidal-shaped hillslope with a clearing in its center to explore the effects of tree size, spacing, weak zones, maximum root-size diameter, and different root strength configurations. Simulation results indicate that tree roots can stabilize slopes that would otherwise fail without them and, in general, higher root density with higher root reinforcement results in a more stable slope. The variation in root stiffness with diameter can, in some cases, invert this relationship. Root tension provides more resistance to failure than root compression but roots with both tension and compression offer the best resistance to failure. Lateral (slope-parallel) tension can be important in cases when the magnitude of this force is comparable to the slope-perpendicular tensile force. In this case, lateral forces can bring to failure tree-covered areas with high root reinforcement. Slope failure occurs when downslope soil compression reaches the soil maximum strength. When this occurs depends on the amount of root tension upslope in both the slope-perpendicular and slope-parallel directions. Roots

The bean rhizosphere Pseudomonas aeruginosa strain RZ9 strongly reduces Fusarium culmorum growth and infectiveness of plant roots

Energy Technology Data Exchange (ETDEWEB)

Haddoudi, I.; Sendi, Y.; Batnini, M.; Romdhane, S.B.; Mhadhbi, H.; Mrabet, M.

2017-07-01

A faba bean rhizospheric Pseudomonas aeruginosa isolate RZ9 was used for studying its antifungal activity and protecting effects of faba bean and common bean against the root pathogen Fusarium culmorum strain MZB47. The dual culture tests showed that RZ9 inhibits MZB47 in vitro growth by 56%. When mixing RZ9 cell suspension with MZB47 macroconidia at equal proportion, the macroconidia viability was reduced with 70%. Pathogenicity tests conducted in sterile conditions showed that MZB47 caused an intense root rotting in faba bean ‘Aquadulce’ plantlets and a slight level in common bean ‘Coco blanc’. This was associated to significant decreases in plant growth only in ‘Aquadulce’, reducing shoot dry weight (DW) by 82% and root DW by 70%. In soil samples, MZB47 caused severe root rotting and induced significant decreases in shoot DW (up to 51%) and root DW (up to 60%) for both beans. It was associated to a decrease in nodule number by 73% and 52% for faba bean and common bean, respectively. Biocontrol assays revealed that the inoculation of RZ9 to MZB47-treated plantlets enhanced shoot DWs (25% and 110%) and root DWs (29% and 67%), in faba bean and common bean, respectively. Moreover, root rotting levels decreased and nodule number increased in treated compared to untreated plantlets. Collected data highlighted the disease severity of F. culmorum and demonstrated the potential of using RZ9 in controlling Fusaria root diseases in beans. Thereby, the current study represents the first report on the biocontrol effectiveness of P. aeruginosa against F. culmorum in beans.

The bean rhizosphere Pseudomonas aeruginosa strain RZ9 strongly reduces Fusarium culmorum growth and infectiveness of plant roots

Directory of Open Access Journals (Sweden)

Imen Haddoudi

2017-07-01

Full Text Available A faba bean rhizospheric Pseudomonas aeruginosa isolate RZ9 was used for studying its antifungal activity and protecting effects of faba bean and common bean against the root pathogen Fusarium culmorum strain MZB47. The dual culture tests showed that RZ9 inhibits MZB47 in vitro growth by 56%. When mixing RZ9 cell suspension with MZB47 macroconidia at equal proportion, the macroconidia viability was reduced with 70%. Pathogenicity tests conducted in sterile conditions showed that MZB47 caused an intense root rotting in faba bean ‘Aquadulce’ plantlets and a slight level in common bean ‘Coco blanc’. This was associated to significant decreases in plant growth only in ‘Aquadulce’, reducing shoot dry weight (DW by 82% and root DW by 70%. In soil samples, MZB47 caused severe root rotting and induced significant decreases in shoot DW (up to 51% and root DW (up to 60% for both beans. It was associated to a decrease in nodule number by 73% and 52% for faba bean and common bean, respectively. Biocontrol assays revealed that the inoculation of RZ9 to MZB47-treated plantlets enhanced shoot DWs (25% and 110% and root DWs (29% and 67%, in faba bean and common bean, respectively. Moreover, root rotting levels decreased and nodule number increased in treated compared to untreated plantlets. Collected data highlighted the disease severity of F. culmorum and demonstrated the potential of using RZ9 in controlling Fusaria root diseases in beans. Thereby, the current study represents the first report on the biocontrol effectiveness of P. aeruginosa against F. culmorum in beans.

Effect of localized nitrogen availability to soybean half-root systems on photosynthate partitioning to roots and nodules

International Nuclear Information System (INIS)

Singleton, P.W.; van Kessel, C.

1987-01-01

Soybean (Glycine max [L.] Merr. cv Davis) was grown in a split-root growth system designed to maintain control of the root atmosphere. Two experiments were conducted to examine how 80% Ar:20%, O 2 (Ar:O 2 ) and air (Air) atmospheres affected N assimilation (NH 4 NO 3 and N 2 fixation) and the partitioning of photosynthate to roots and nodules. Application of NH 4 NO 3 to nonnodulated half-root systems enhanced root growth and root respiration at the site of application. A second experiment applied Ar:O 2 or air to the two sides of nodulated soybean half-root systems for 11 days in the following combinations: (a) Air to both sides (Air/Air); (b) Air to one side, Ar:O 2 to the other (Air/Ar:O 2 ), and (c) Ar:O 2 to both sides (Ar:O 2 /Ar:O 2 ). Results indicated that dry matter and current photosynthate ( 14 C) were selectively partitioned to nodules and roots where N 2 was available. Both root and nodule growth on the Air side of Air/Ar:O 2 plants was significantly greater than the Ar:O 2 side. The relative partitioning of carbon and current photosynthate between roots and nodules on a half-root system was also affected by N 2 availability. The Ar:O 2 sides partitioned relatively more current photosynthate to roots (57%) than nodules (43%), while N 2 -fixing root systems partitioned 36 and 64% of the carbon to roots and nodules, respectively. The Ar:O 2 atmosphere decreased root and nodule respiration by 80% and nitrogenase activity by 85% compared to half-root systems in Air while specific nitrogenase activity in Ar:O 2 was 50% of nodules supplied Air. Results indicated that nitrogen assimilation, whether from N 2 fixation or inorganic sources, had a localized effect on root development

Root tips moving through soil

Science.gov (United States)

Curlango-Rivera, Gilberto

2011-01-01

Root elongation occurs by the generation of new cells from meristematic tissue within the apical 1–2 mm region of root tips. Therefore penetration of the soil environment is carried out by newly synthesized plant tissue, whose cells are inherently vulnerable to invasion by pathogens. This conundrum, on its face, would seem to reflect an intolerable risk to the successful establishment of root systems needed for plant life. Yet root tip regions housing the meristematic tissues repeatedly have been found to be free of microbial infection and colonization. Even when spore germination, chemotaxis, and/or growth of pathogens are stimulated by signals from the root tip, the underlying root tissue can escape invasion. Recent insights into the functions of root border cells, and the regulation of their production by transient exposure to external signals, may shed light on long-standing observations. PMID:21455030

Valve-sparing root replacement in children with aortic root aneurysm: mid-term results.

Science.gov (United States)

Lange, Rüdiger; Badiu, Catalin C; Vogt, Manfred; Voss, Bernhard; Hörer, Jürgen; Prodan, Zsolt; Schreiber, Christian; Mazzitelli, Domenico

2013-05-01

We aimed at evaluating the results of aortic valve-sparing root replacement (AVSRR) in children with aortic root aneurysm (ARA) due to genetic disorders in terms of mortality, reoperation and recurrent aortic valve regurgitation (AVR). Thirteen patients (mean age 9.7 ± 6.5 years, 10 months-18 years) underwent AVSRR for ARA between 2002 and 2011. Six of the 13 patients had Marfan syndrome, 3 Loeys-Dietz syndrome (LDS), 2 bicuspid aortic valve syndrome and 2 an unspecified connective tissue disorder. AVR was graded as none/trace, mild and severe in 5, 7 and 1 patient, respectively. The mean pre-operative root diameter was 45 ± 10 mm (mean Z-score 10.3 ± 2.0). Remodelling of the aortic root was performed in 4 patients, reimplantation of the aortic valve in 9 and a concomitant cusp repair in 4. The diameter of the prostheses used for root replacement varied from 22 to 30 mm (mean Z-score = 2.3 ± 3). The follow-up was 100% complete with a mean follow-up time of 3.7 years. There was no operative mortality. One patient with LDS died 2.5 years after the operation due to spontaneous rupture of the descending aorta. Root re-replacement with mechanical conduit was necessary in 1 patient for severe recurrent AVR 8 days after remodelling of the aortic root. At final follow-up, AVR was graded as none/trace and mild in all patients. Eleven patients presented in New York Heart Association functional Class I and 1 in Class II. In paediatric patients with ARA, valve-sparing root replacement can be performed with low operative risk and excellent mid-term valve durability. Hence, prosthetic valve-related morbidity may be avoided. Due to the large diameters of the aortic root and the ascending aorta, the size of the implanted root prostheses will not limit later growth of the native aorta.

Exogenous nitrate induces root branching and inhibits primary root growth in Capsicum chinense Jacq.

Science.gov (United States)

Celis-Arámburo, Teresita de Jesús; Carrillo-Pech, Mildred; Castro-Concha, Lizbeth A; Miranda-Ham, María de Lourdes; Martínez-Estévez, Manuel; Echevarría-Machado, Ileana

2011-12-01

The effects of nitrate (NO₃⁻) on the root system are complex and depend on several factors, such as the concentration available to the plant, endogenous nitrogen status and the sensitivity of the species. Though these effects have been widely documented on Arabidopsis and cereals, no reports are available in the Capsicum genus. In this paper, we have determined the effect of an exogenous in vitro application of this nutrient on root growth in habanero pepper (Capsicum chinense Jacq.). Exposure to NO₃⁻ inhibited primary root growth in both, dose- and time-dependent manners. The highest inhibition was attained with 0.1 mM NO₃⁻ between the fourth and fifth days of treatment. Inhibition of primary root growth was observed by exposing the root to both homogeneous and heterogeneous conditions of the nutrient; in contrast, ammonium was not able to induce similar changes. NO₃⁻-induced inhibition of primary root growth was reversed by treating the roots with IAA or NPA, a polar auxin transport inhibitor. Heterogeneous NO₃⁻ application stimulated the formation and elongation of lateral roots in the segment where the nutrient was present, and this response was influenced by exogenous phytohormones. These results demonstrate that habanero pepper responds to NO₃⁻ in a similar fashion to other species with certain particular differences. Therefore, studies in this model could help to elucidate the mechanisms by which roots respond to NO₃⁻ in fluctuating soil environments. Copyright © 2011 Elsevier Masson SAS. All rights reserved.

Regrowth of Cirsium arvense from intact roots and root fragments at different soil depths

Directory of Open Access Journals (Sweden)

Thomsen, Mette Goul

2014-02-01

Full Text Available In the present work we measured the shoot rate from intact roots and from root fragments of Cirsium arvense at different digging depths and the number of leaves were used as estimate of minimum regenerative capacity. The experiments were performed on four sites with three or four repetitions of each treatment. On each site plot, the soil was removed down to a given depth within a 1 x 1 m square. All plant parts was excavated from the soil and the soil was either replaced without any root material, or roots of C. arvense was cut into 10 cm long fragments and replaced into the source hole. Shoot number, aboveground biomass and number of leaves were measured. Digging depth and time explained 50% - 60% of the variation in biomass (P<0.001. Replacement of root fragments increased the shoot number in one out of four treatments but did not affect biomass produced compared to production from undisturbed root systems. Number of leaves showed that shoots from all digging depths passed the level of minimum regenerative capacity. We conclude that the intact root system from all depths was able to regenerate within one season and it has a high contribution to the produced biomass compared with root fragments in the upper soil layers.

Decreased levels of matrix metalloproteinase-2 in root-canal exudates during root canal treatment.

Science.gov (United States)

Pattamapun, Kassara; Handagoon, Sira; Sastraruji, Thanapat; Gutmann, James L; Pavasant, Prasit; Krisanaprakornkit, Suttichai

2017-10-01

To determine the matrix metalloproteinase-2 (MMP-2) levels in root-canal exudates from teeth undergoing root-canal treatment. The root-canal exudates from six teeth with normal pulp and periradicular tissues that required intentional root canal treatment for prosthodontic reasons and from twelve teeth with pulp necrosis and asymptomatic apical periodontitis (AAP) were sampled with paper points for bacterial culture and aspirated for the detection of proMMP-2 and active MMP-2 by gelatin zymography and the quantification of MMP-2 levels by ELISA. By gelatin zymography, both proMMP-2 and active MMP-2 were detected in the first collection of root-canal exudates from teeth with pulp necrosis and AAP, but not from teeth with normal pulp, and their levels gradually decreased and disappeared at the last collection. Consistently, ELISA demonstrated a significant decrease in MMP-2 levels in the root-canal exudates of teeth with pulp necrosis and AAP following root canal procedures (papical lesions, similar to the clinical application of MMP-8 as a biomarker. Copyright © 2017 Elsevier Ltd. All rights reserved.

ROOT HAIR DEFECTIVE SIX-LIKE Class I Genes Promote Root Hair Development in the Grass Brachypodium distachyon.

Directory of Open Access Journals (Sweden)

Chul Min Kim

2016-08-01

Full Text Available Genes encoding ROOT HAIR DEFECTIVE SIX-LIKE (RSL class I basic helix loop helix proteins are expressed in future root hair cells of the Arabidopsis thaliana root meristem where they positively regulate root hair cell development. Here we show that there are three RSL class I protein coding genes in the Brachypodium distachyon genome, BdRSL1, BdRSL2 and BdRSL3, and each is expressed in developing root hair cells after the asymmetric cell division that forms root hair cells and hairless epidermal cells. Expression of BdRSL class I genes is sufficient for root hair cell development: ectopic overexpression of any of the three RSL class I genes induces the development of root hairs in every cell of the root epidermis. Expression of BdRSL class I genes in root hairless Arabidopsis thaliana root hair defective 6 (Atrhd6 Atrsl1 double mutants, devoid of RSL class I function, restores root hair development indicating that the function of these proteins has been conserved. However, neither AtRSL nor BdRSL class I genes is sufficient for root hair development in A. thaliana. These data demonstrate that the spatial pattern of class I RSL activity can account for the pattern of root hair cell differentiation in B. distachyon. However, the spatial pattern of class I RSL activity cannot account for the spatial pattern of root hair cells in A. thaliana. Taken together these data indicate that that the functions of RSL class I proteins have been conserved among most angiosperms-monocots and eudicots-despite the dramatically different patterns of root hair cell development.

[Root canal treatment of mandibular first premolar with 4 root canals: a case report].

Science.gov (United States)

Liu, Xin-yang; Zhan, Fu-Liang

2015-10-01

The mandibular first premolar can be considered one of the most challenging teeth to treat, due to the complexity of its root canal morphology and increased incidence of multiple canals. A case of endodontic treatment of a mandibular first premolar exhibiting a total of 4 distinct root canals and 4 apical foramina was described. Anatomic variation of root canal morphology should be considered in endodontic treatment to ensure a favorable healing outcome, and its identification could be enhanced by careful examination using a dental operating microscope. Obturation of root canals using a warm vertical compaction technique with a highly-radiopaque root canal sealer, such as AH Plus, after careful ultrasonic activated irrigation might allow the flow of sealer into the narrowed but unprepared part of the canal, thereby facilitating optimum chemo-mechanical debridement of the root canal system.

RUNTIME DICTIONARIES FOR ROOT

CERN Document Server

Wind, David Kofoed

2013-01-01

ROOT is the LHC physicists' common tool for data analysis; almost all data is stored using ROOT's I/O system. This system benefits from a custom description of types (a so-called dictionary) that is optimised for the I/O. Until now, the dictionary cannot be provided at run-time; it needs to be prepared in a separate prerequisite step. This project will move the generation of the dictionary to run-time, making use of ROOT 6's new just-in-time compiler. It allows a more dynamic and natural access to ROOT's I/O features especially for user code.

Root systems of chaparral shrubs.