WorldWideScience

Sample records for rice growing regions

  1. Suitability analysis for rice growing sites using a multicriteria evaluation and GIS approach in great Mwea region, Kenya.

    Science.gov (United States)

    Kihoro, Joseph; Bosco, Njoroge J; Murage, Hunja

    2013-12-01

    Land suitability analysis is a prerequisite to achieving optimum utilization of the available land resources. Lack of knowledge on best combination of factors that suit production of rice has contributed to the low production. The aim of this study was to develop a suitability map for rice crop based on physical and climatic factors of production using a Multi-Criteria Evaluation (MCE) & GIS approach. The study was carried out in Kirinyaga, Embu and Mberee counties in Kenya. Biophysical variables of soil, climate and topography were considered for suitability analysis. All data were stored in ArcGIS 9.3 environment and the factor maps were generated. For MCE, Pairwise Comparison Matrix was applied and the suitable areas for rice crop were generated and graduated. The current land cover map of the area was developed from a scanned survey map of the rice growing areas. According to the present land cover map, the rice cultivated area was 13,369 ha. Finally, we overlaid the land cover map with the suitability map to identify variances between the present and potential land use. The crop-land evaluation results of the present study showed that, 75% of total area currently being used was under highly suitable areas and 25% was under moderately suitable areas. The results showed that the potential area for rice growing is 86,364 ha and out of this only 12% is under rice cultivation. This research provided information at local level that could be used by farmers to select cropping patterns and suitability.

  2. Glufosinate herbicide-tolerant (LibertyLink) rice vs. conventional rice in diets for growing-finishing swine.

    Science.gov (United States)

    Cromwell, G L; Henry, B J; Scott, A L; Gerngross, M F; Dusek, D L; Fletcher, D W

    2005-05-01

    Genetically modified (GM) rice (LibertyLink, event LLRICE62) that is tolerant to glufosinate ammonium (Liberty) herbicide was compared with a near-isogenic (NI) conventional medium-grain brown rice (cultivar, Bengal) and a commercially milled long-grain brown rice in diets for growing-finishing pigs. The GM and NI rice were grown in 2000. The GM rice was from fields treated (GM+) or not treated (GM-) with glufosinate herbicide. The GM- and NI rice were grown using herbicide regimens typical of southern United States rice production practices. The four rice grains were similar in composition. Growing-finishing pigs (n = 96) were fed fortified rice-soybean meal diets containing the four different rice grains from 25 to 106 kg BW. Diets contained 0.99% lysine initially (growing phase), with lysine decreased to 0.80% (early finishing phase) and 0.65% (late finishing phase), when pigs reached 51 and 77 kg, respectively. The percentage of rice in the four diets was constant during each of the three phases (72.8, 80.0, and 85.8% for the growing, early-finishing, and late-finishing phases, respectively). There were six pen replicates (three pens of barrows and three pens of gilts) and four pigs per pen for each dietary treatment. All pigs were slaughtered at the termination of the study to collect carcass data. At the end of the 98-d experiment, BW gain, feed intake (as-fed basis), and feed:gain ratio did not differ (P > 0.05) for pigs fed the GM+ vs. conventional rice diets, but growth performance traits of pigs fed the GM+ rice diets were superior (P glufosinate herbicide-tolerant rice was similar in composition and nutritional value to conventional rice for growing-finishing pigs.

  3. Prediction of Digestible and Metabolizable Energy Content of Rice Bran Fed to Growing Pigs

    Directory of Open Access Journals (Sweden)

    C. X. Shi

    2015-05-01

    Full Text Available Two experiments were conducted to determine the digestible energy (DE and metabolizable energy (ME content of 19 rice bran samples and to develop prediction equations for DE and ME based on their chemical composition. The 19 rice bran samples came from different rice varieties, processing methods and regions. The basal diet was formulated using corn and soybean meal (74.43% corn and 22.91% soybean meal and 2.66% vitamins and minerals. The 19 experimental diets based on a mixture of corn, soybean meal and 29.2% of each source of rice bran, respectively. In Exp. 1, 108 growing barrows (32.1±4.2 kg were allotted to 1 of 18 treatments according to a completely randomized design with 6 pigs per treatment. The treatment 1 was the control group which was fed with basal diet. The treatments 2 to 18 were fed with experimental diets. In Exp. 2, two additional rice bran samples were measured to verify the prediction equations developed in Exp. 1. A control diet and two rice bran diets were fed to 18 growing barrows (34.6±3.5 kg. The control and experimental diets formulations were the same as diets in Exp. 1. The results showed that the DE ranged from 14.48 to 16.85 (mean 15.84 MJ/kg of dry matter while the ME ranged from 12.49 to 15.84 (mean 14.31 MJ/kg of dry matter. The predicted values of DE and ME of the two additional samples in Exp. 2 were very close to the measured values.

  4. UTILIZATION OF AMINO ACIDS OF BROKEN RICE IN GROWING PIGS

    Directory of Open Access Journals (Sweden)

    Matej Brestenský

    2014-02-01

    Full Text Available The six cannulated gilts (initial body weight 35.8 ± 0.5 kg fitted with a T-cannula in terminal ileum, were used to determine the apparent (AID and standardized (SID ileal digestibility of nitrogen (N and amino acids (AA in broken rice. Animals were fed twice daily in a two equal doses at a daily rate of 80 g.kg - 0.75. Water was offered ad libitum. The tested feed was the sole source of protein in the diet. The N-free diet was used to determine the ileal endogenous flow of AA and N. Chromium oxide (Cr2O3 was added to the diets as an indigestible marker in an amount of 0.3 % per kg of diet. After a 14 d postoperative period a 6 d adaptation period followed during which the animals were fed with an experimental diet. On d 7 ileal digesta was collected continuously for 24 h. The AID and SID of AA and N were calculated using analytically determined values of N, Cr2O3 and AA. The SID of AA was in a range from 81.6 % (tyrosine to 112.6 % (proline (P 0.05, respectively. There were no differences between standardized ileal digestibility of essential amino acids (94.3 % and nonessential amino acids (95.3 %. Regarding the ileal digestibility of AA, broken rice, a by-product from the food industry, is an appropriate source of digestible AA for growing pigs.

  5. Studies on the Ecological Adaptability of Growing Rice with Floating Bed on the Dilute Biogas Slurry

    Science.gov (United States)

    Du, Qi; Cheng, Bowen; Liao, Zhiqi; Sun, Chengcheng

    2016-01-01

    This study aimed to explore the ecological adaptability and the possibility of growing rice with floating bed on the dilute biogas slurry. The results of the experiments show that the growth stage, rice plant height, and rice yield and quality were significantly affected by multiple dilutions; rice plants cultivated with 45 multiple dilutions had better ecological adaptability than others. In the 45 multiple dilutions' group, the yield of rice was 13.3 g/bucket (8 rice plants), milled rice rate was 63.1%, and the content of crude protein in the rice was 6.3%. The concentrations of heavy metals in the rice cultivated with 30 multiple dilutions' slurry, such as total lead, cadmium, mercury, chromium, and arsenic, were all below the national standard. The study shows that it is possible and safe to cultivate rice plants with no soil but diluted biogas slurry. In the experiments, the yield, milled rice rate, and crude protein of the rice cultivated with slurry were not as much as those of rice cultivated with regular way in soil. This study provides the basic theoretical support for the development of biogas projects and the potential achievement of organic farming in special agricultural facilities and circular economy. PMID:27882324

  6. Studies on the Ecological Adaptability of Growing Rice with Floating Bed on the Dilute Biogas Slurry.

    Science.gov (United States)

    Kang, Qun; Li, Rui; Du, Qi; Cheng, Bowen; Liao, Zhiqi; Sun, Chengcheng; Li, Zhaohua

    2016-01-01

    This study aimed to explore the ecological adaptability and the possibility of growing rice with floating bed on the dilute biogas slurry. The results of the experiments show that the growth stage, rice plant height, and rice yield and quality were significantly affected by multiple dilutions; rice plants cultivated with 45 multiple dilutions had better ecological adaptability than others. In the 45 multiple dilutions' group, the yield of rice was 13.3 g/bucket (8 rice plants), milled rice rate was 63.1%, and the content of crude protein in the rice was 6.3%. The concentrations of heavy metals in the rice cultivated with 30 multiple dilutions' slurry, such as total lead, cadmium, mercury, chromium, and arsenic, were all below the national standard. The study shows that it is possible and safe to cultivate rice plants with no soil but diluted biogas slurry. In the experiments, the yield, milled rice rate, and crude protein of the rice cultivated with slurry were not as much as those of rice cultivated with regular way in soil. This study provides the basic theoretical support for the development of biogas projects and the potential achievement of organic farming in special agricultural facilities and circular economy.

  7. Demethylation of methylmercury in growing rice plants: An evidence of self-detoxification

    International Nuclear Information System (INIS)

    Xu, Xiaohan; Zhao, Jiating; Li, Yunyun; Fan, Yuqin; Zhu, Nali; Gao, Yuxi; Li, Bai; Liu, Hanyu; Li, Yu-Feng

    2016-01-01

    Mercury (Hg) is a global pollutant that poses a serious threat to human and the environment. Rice was found as an important source for human exposure to Hg in some areas. In this study, the transportation and transformation of IHg and MeHg in rice plants exposed to IHg or MeHg were investigated. The IHg and MeHg concentrations in rice roots and shoots collected every five days were analyzed by HPLC-ICP-MS and SR-XANES. When exposed to MeHg, the percent of IHg in rice roots and shoots increased while MeHg decreased significantly, suggesting prominent demethylation of MeHg occurred. However no notable MeHg was found in both roots and shoots of rice plant when exposed to IHg. SR-XANES analysis further confirmed the demethylation of MeHg with rice. This study provides a new finding that demethylation of MeHg could occur in growing rice, which may be a self-defense process of rice plant. - Graphical abstract: Inorganic mercury in Rice (Oryza sativa L.) plants exposed to methylmercury was detected: An evidence of rice plant against methylmercury phytotoxicity. Display Omitted - Highlights: • Demethylation of MeHg in rice plant was found in rice root. • Hg in rice roots mainly present as MeHg-SR or RS-Hg-SR form. • MeHg-SR in roots can be gradually transformed to RS-Hg-SR with rice growth. - Demethylation of MeHg in growing rice.

  8. Parallelized Seeded Region Growing Using CUDA

    Directory of Open Access Journals (Sweden)

    Seongjin Park

    2014-01-01

    Full Text Available This paper presents a novel method for parallelizing the seeded region growing (SRG algorithm using Compute Unified Device Architecture (CUDA technology, with intention to overcome the theoretical weakness of SRG algorithm of its computation time being directly proportional to the size of a segmented region. The segmentation performance of the proposed CUDA-based SRG is compared with SRG implementations on single-core CPUs, quad-core CPUs, and shader language programming, using synthetic datasets and 20 body CT scans. Based on the experimental results, the CUDA-based SRG outperforms the other three implementations, advocating that it can substantially assist the segmentation during massive CT screening tests.

  9. Partitioning of etofenprox under simulated California rice-growing conditions.

    Science.gov (United States)

    Vasquez, Martice E; Gunasekara, Amrith S; Cahill, Thomas M; Tjeerdema, Ronald S

    2010-01-01

    The pyrethroid insecticide etofenprox is of current interest to rice farmers in the Sacramento Valley owing to its effectiveness against the rice water weevil, Lissorhoptrus oryzophilus Kuschel. This study aimed to describe the partitioning of etofenprox under simulated rice field conditions by determining its Henry's law constant (H) (an estimate of volatilization) and organic carbon-normalized soil-water distribution coefficient (K(oc)) at representative field temperatures. A comparison of etofenprox and lambda-cyhalothrin is presented using a level-1 fugacity model. Experimental determination of H revealed that etofenprox partitioned onto the apparatus walls and did not significantly volatilize; the maximum value of H was estimated to be 6.81 x 10(-1) Pa m(3) mol(-1) at 25 degrees C, based on its air and water method detection limits. Calculated values for H ranged from 5.6 x 10(-3) Pa m(3) mol(-1) at 5 degrees C to 2.9 x 10(-1) Pa m(3) mol(-1) at 40 degrees C, based on estimated solubility and vapor pressure values at various temperatures. Log K(oc) values (at 25 degrees C) were experimentally determined to be 6.0 and 6.4 for Princeton and Richvale rice field soils, respectively, and were very similar to the values for other pyrethroids. Finally, temperature appears to have little influence on etofenprox sorption, as the log K(oc) for the Princeton soil at 35 degrees C was 6.1. High sorption coefficients and relatively insignificant desorption and volatilization of etofenprox suggest that its insolubility drives it to partition from water by sorbing to soils with high affinity. Offsite movement is unlikely unless transported in a bound state on suspended sediments.

  10. Effects of compost on soil fertility in irrigated rice growing at Kou ...

    African Journals Online (AJOL)

    Effects of compost on soil fertility in irrigated rice growing at Kou Valley (Burkina Faso) : Amélioration de la fertilité du sol par utilisation du compost en riziculture irriguée dans la Vallée du Kou au Burkina Faso.

  11. Physiological and Biochemical Responses of Growing Rats Fed Irradiated Full-Fat Rice Bran

    International Nuclear Information System (INIS)

    EL-Niely, H.F.G.

    2006-01-01

    Raw and irradiated full-fat rice bran at dose levels of 10, 15, 20 and 25 kGy were used in the diets of growing rats to evaluate their effect on plasma and liver lipid profile. Comparison was also done with the use of a standard casein diet. After 49 days of feeding trail, food intake and wt gain were found to be highest with rats received casein diet in comparison with those fed on rice bran diets. Raw and irradiated full-fat rice bran diets, fed to rats caused a significant reduction in the level of total cholesterol (TC), triglycerides (TG), and low-density lipoprotein cholesterol (LDL-c), while a significant elevation in the level of high-density lipoprotein cholesterol (HDL-c) in plasma was recorded compared to those fed on casein diet. Also, similar changes were observed in liver. There was a significant increase in plasma and liver HDL-c/ TC ratio and LDL-c/ HDL-c ratio. Relative liver wt of rats fed on raw and irradiated full-fat rice brain up to 25 kGy was lower compared to those fed on control diet (casein diet). The casein group had the highest total plasma and liver total protein (TP) compared to the other experimental groups. Among the experimental groups, raw and processed full-fat rice brain up to 25 kGy, induced no significant effect on TP content of plasma and liver

  12. Towards a smart automated surface irrigation management in rice-growing areas in Italy

    Directory of Open Access Journals (Sweden)

    Daniele Masseroni

    2017-02-01

    Full Text Available Italy is the leading rice producer in Europe, accounting for more than half of the total high-quality production of this crop. Rice is traditionally grown in fields that remain flooded starting with crop establishment until close to harvest, and this traditional irrigation technique (i.e., continuous submergence is recognised as an important water resource sink (almost 40% of the irrigation water available worldwide is used for paddy areas. Meanwhile, the water management in rice areas requires a high level of labour because it is based on maintaining a predetermined water height in paddy fields and because the regulation of input and output flow is typically operated manually by the farmer. This study reveals the hardware and software characteristics of an automated and remote controlled technology tested for the first time in a rice farm near Pavia (Italy, during the 2016 growing season, aiming at a more efficient and less burdensome irrigation management system for rice fields. A water level sensor in the field provides the data required to govern the inflow regulation gate in real-time, according to the precise time to cut off the flow rate. Using a dedicated web page, the farmer can control flows, volumes and water levels in the fields by operating directly on the gate if necessary or setting the irrigation program according to his agronomic practices.

  13. Schistosomiasis mansoni and paddy-rice growing in Uganda: an emerging new problem.

    Science.gov (United States)

    Bukenya, G B; Nsungwa, J L; Makanga, B; Salvator, A

    1994-08-01

    In Eastern Uganda, paddy-rice growing, which has only become popular in recent years, seems to be associated with the emergence of schistosomiasis mansoni as a new problem in public health. To estimate the magnitude of this problem, a cross-sectional, baseline survey was carried out in six villages of the Kibimba Rice Scheme. The overall prevalence of Schistosoma mansoni infection was found to be 20%. The highest prevalences and intensities of infection were seen in those aged 5-29 years, with more males infected than females. An attempt was then made to identify the important factors in the aetiology of S. mansoni in this area. Odds ratios indicated that working regularly in the rice paddies, fishing with baskets, and being male were statistically associated with an increased risk of S. mansoni infection. It is clear that schistosomiasis mansoni which is emerging as a new health problem in the study area is closely linked to working in the rice paddies. Encouraging the rice farmers to wear knee-high, waterproof boots while in the fields may help control the disease.

  14. Incorporating Edge Information into Best Merge Region-Growing Segmentation

    Science.gov (United States)

    Tilton, James C.; Pasolli, Edoardo

    2014-01-01

    We have previously developed a best merge region-growing approach that integrates nonadjacent region object aggregation with the neighboring region merge process usually employed in region growing segmentation approaches. This approach has been named HSeg, because it provides a hierarchical set of image segmentation results. Up to this point, HSeg considered only global region feature information in the region growing decision process. We present here three new versions of HSeg that include local edge information into the region growing decision process at different levels of rigor. We then compare the effectiveness and processing times of these new versions HSeg with each other and with the original version of HSeg.

  15. Use of the rice husk as an alternative substrate for growing media on green walls drip irrigation

    Science.gov (United States)

    Andrey Rivas-Sánchez, Yair; Fátima Moreno-Pérez, María; Roldán Cañas, José

    2017-04-01

    In the last years, we have been looking for alternatives to traditional growing mediums for green walls. Commercially available systems for green walls are commonly made with Sphagnum, rock wool or polymers that are unsustainable materials. In the design of the green wall, local components such as agricultural by-products should be considered more often. The objective of this research is to use alternative materials available in Andalusia that are suitable for use as a growing medium in green walls, using organic residues generated by agriculture as in this case the rice husk, compared to conventional and used materials as a growing media in green walls such as coconut fiber and rock wool. The physical-chemical characteristics of the water were analyzed through the collection of excess irrigation water, after passing through the prototypes of green walls, installed in the Rabanales Campus of the University of Córdoba between April and July 2016 and thus observe the feasibility of using rice husk as an alternative material. The 16 mm diameter irrigation pipes are at the top and middle of each module, with 12 adjustable drippers of 4 l / h for each module, 72 drippers in the whole experimental green wall prototype installed at every 15 centimeters of tube. Two different species of plant material (Lampranthus spectabilis) and (Lavandula stoechas), were selected, taking into account the solar exposition of the place of establishment of the prototype of the green wall and the easy acquisition of these plants in the region. Water samples were collected every day twice a day for 10 weeks of the experiment, taking a sample of the surplus runoff water from six green wall prototypes.PH 40 - pH - conductivity - TDS - temperature, CRISON. Differences in pH, electrical conductivity, turbidity and total solids of the treatments were examined by ANOVA with the test of normality and homogeneity of variances. It was observed that the substrates used in the prototypes of the

  16. 137Cs absorption by growing rice planted in pot soil from Qinshan and Daya Bay area

    International Nuclear Information System (INIS)

    Shang Zhaorong; Yu Fengyi; Lu Zixian

    1999-01-01

    The pot experiment of growing rice contaminated with 137 Cs solution was designed as follows. (1) The same volume of 137 Cs solution was irrigated into rice soil from Guantang District around Qinshan NPP in seedling stage, booting stage and milk stage respectively with the same Specific Activity (SA) of 370 Bq/g soil , and the rice was sampled after maturity. (2) In the seedling stage, the rice cultured in the soil from Guantang District was irrigated by four different SA of 0.37, 3.7, 37 and 370 Bq/g soil respectively, and sampled after 30, 60 and 90 d. (3) Transfer Factors (TF) of edible parts of rice on five different soils were calculated for three different stage and four different 137 Cs levels. The results show that: 1) TF of Shenzhen soil is the highest with 1.86 in seed and 2.22 in stem and 4.05 in leaf, Changchuanba soil is the lowest with 0.09 in seed and 0.20 in stem and 0.20 in leaf, among the five different soils. 2) TF in milk stage is the highest with 0.46 in seed and 2.29 in stem and 2.87 in leaf, and booting stem is lowest with 0.09 in seed and 0.17 in stem and 0.17 in leaf, among the three different stage. 3) TF of soil with contamination in 0.37 Bq/g soil is the highest with 1.08 in seed and 3.70 in stem and 4.32 in leaf, and the contamination in 37 Bq/g soil is the lowest with 0.06 in seed and 0.10 in stem and 0.14 in leaf, among four different contamination levels

  17. Mapping regional risks from climate change for rainfed rice cultivation in India.

    Science.gov (United States)

    Singh, Kuntal; McClean, Colin J; Büker, Patrick; Hartley, Sue E; Hill, Jane K

    2017-09-01

    Global warming is predicted to increase in the future, with detrimental consequences for rainfed crops that are dependent on natural rainfall (i.e. non-irrigated). Given that many crops grown under rainfed conditions support the livelihoods of low-income farmers, it is important to highlight the vulnerability of rainfed areas to climate change in order to anticipate potential risks to food security. In this paper, we focus on India, where ~ 50% of rice is grown under rainfed conditions, and we employ statistical models (climate envelope models (CEMs) and boosted regression trees (BRTs)) to map changes in climate suitability for rainfed rice cultivation at a regional level (~ 18 × 18 km cell resolution) under projected future (2050) climate change (IPCC RCPs 2.6 and 8.5, using three GCMs: BCC-CSM1.1, MIROC-ESM-CHEM, and HadGEM2-ES). We quantify the occurrence of rice (whether or not rainfed rice is commonly grown, using CEMs) and rice extent (area under cultivation, using BRTs) during the summer monsoon in relation to four climate variables that affect rice growth and yield namely ratio of precipitation to evapotranspiration ( PER ), maximum and minimum temperatures ( T max and T min ), and total rainfall during harvesting. Our models described the occurrence and extent of rice very well (CEMs for occurrence, ensemble AUC = 0.92; BRTs for extent, Pearson's r = 0.87). PER was the most important predictor of rainfed rice occurrence, and it was positively related to rainfed rice area, but all four climate variables were important for determining the extent of rice cultivation. Our models project that 15%-40% of current rainfed rice growing areas will be at risk (i.e. decline in climate suitability or become completely unsuitable). However, our models project considerable variation across India in the impact of future climate change: eastern and northern India are the locations most at risk, but parts of central and western India may benefit from increased

  18. The performance of growing goats fed urea treated rice straw supplemented with Incum (Klienhovia hospita foliage

    Directory of Open Access Journals (Sweden)

    Jusoh, S

    2017-06-01

    and T2 diets were significantly higher than that of diet T4. Thus the study indicated that feeding goats with urea treated rice straw supplemented with KH foliage gave a positive effect on growing goats replacing concentrate fed with rice straw basal diet. It is concluded that the inclusion of KH foliage in the diet of goats has improved their growth performance and feed intake.

  19. Rice gluten meal as an alternative by-product feed for growing dairy calves.

    Science.gov (United States)

    Kumar, Rohit; Thakur, Sudarshan Singh; Mahesh, M S

    2016-03-01

    This experiment aimed at studying the nutritional characteristics and feeding value of rice gluten meal (RGM, a wet-milling by-product of rice) in growing dairy calves. RGM contained 464 g/kg of crude protein with 821 and 196 g/kg nitrogen (N) of borate-phosphate insoluble N and acid detergent insoluble N, respectively, which were higher (P calves (6-12 months) were randomly assigned into three groups based on comparable body weight and age. The first group (GP-I) was fed concentrate mixture containing mainly GNC as protein source, whilst it was replaced by RGM up to 50 and 75 % on N basis, in second (GP-II) and third (GP-III) groups, respectively. Thus, RGM constituted 140 and 210 g/kg of concentrate mixture of GP-II and GP-III, respectively. In addition, all animals were offered chopped green maize and wheat straw for the whole experimental period of 90 days. Results revealed that there was no difference in intake and digestibility of nutrients, N balance, average daily gain (ADG) and feed efficiency among three groups. Nevertheless, RGM-based diets produced cost-effective ADG than GP-I. Furthermore, experimental calves did not differ in haematological variables like glucose, blood urea N, plasma proteins and non-esterified fatty acids. This study demonstrated that RGM could be incorporated successfully in the concentrate mixture, replacing 75 % of GNC without any discernable compromise in the performance of growing calves.

  20. Capability and quality assessment of rice growing hydric soils in majuli river island, assam, India

    Directory of Open Access Journals (Sweden)

    Bhaskara Phaneendra Bhaskar

    2013-06-01

    Full Text Available The  wetland soils in  majuli island is a unique in maintaining rice ecology and geoenvironment in Brahmaputra valley of Assam  due to increasing  rate of  bankline erosion in southern bank  and expansion of channel bars on northern banks. These hydric soils in the subgroups of aquents and aquepts are  saturated throughout year as assessed from depleted matrix with hue 10YR, 2.5Y and 5Y, chroma less than 2, stratified textures, neutral to slightly alkaline reaction, low cation exchange capacity  and poor exchangeable base status. The  assessment of land capability and soil quality  for rice production in   hydric soils  was conducted on twenty four soil mapping units derived from reconnaissance soil survey done on 1:50000 scale.  As per  land capability  assessment, these soils are  good(classII to fairly good(IV for arable use with limitations of low fertility status, moderate to severe wetness and moderate to rapid permeability. The soil quality rating with  multiple variable indicator transform(MVIT technique  of  twenty hydric soil units in active and old floodplains was  medium (35 to 65per cent with six indicators(pH, organic carbon, base saturation, effective rooting depth , structure and texture meeting the thresh hold value  above 65 per cent.  Thirty five  per cent of total area is suitable for rice cultivation as against the current cropped area of 7.2 per cent with potassium and zinc deficiency. The determination of soil quality in relation to land capability was found useful to design best management practices for wetlands in the region that ensure sustainable land use.

  1. SAR Imagery Segmentation by Statistical Region Growing and Hierarchical Merging

    Energy Technology Data Exchange (ETDEWEB)

    Ushizima, Daniela Mayumi; Carvalho, E.A.; Medeiros, F.N.S.; Martins, C.I.O.; Marques, R.C.P.; Oliveira, I.N.S.

    2010-05-22

    This paper presents an approach to accomplish synthetic aperture radar (SAR) image segmentation, which are corrupted by speckle noise. Some ordinary segmentation techniques may require speckle filtering previously. Our approach performs radar image segmentation using the original noisy pixels as input data, eliminating preprocessing steps, an advantage over most of the current methods. The algorithm comprises a statistical region growing procedure combined with hierarchical region merging to extract regions of interest from SAR images. The region growing step over-segments the input image to enable region aggregation by employing a combination of the Kolmogorov-Smirnov (KS) test with a hierarchical stepwise optimization (HSWO) algorithm for the process coordination. We have tested and assessed the proposed technique on artificially speckled image and real SAR data containing different types of targets.

  2. Replacing groundnut cake with gluten meals of rice and maize in diets for growing Sahiwal cattle.

    Science.gov (United States)

    Malik, Tariq A; Thakur, S S; Mahesh, M S; Yogi, R K

    2017-10-01

    This experiment investigated the effect of isonitrogenous replacement of groundnut cake (GNC) by rice gluten meal (RGM) and maize gluten meal (MGM) at 75% level on nutrient intake, apparent digestibility, growth performance and related blood constituents in growing Sahiwal cattle. Eighteen Sahiwal calves were divided into three groups, based on average body weight (87.24 kg) and age (6 to 12 mo), and treatments were assigned to the different groups randomly. The first group (GP-I) was kept as control and received GNC-based concentrate mixture. In second (GP-II) and third (GP-III) groups, 750 g/kg nitrogen (N) of GNC was substituted by RGM and MGM respectively, with similar forage:concentrate ratio (56:44). The 90 days of experimental feeding revealed that intake of dry matter, crude protein and digestibility coefficients for all nutrients did not differ among groups. Furthermore, although N balance was greater (p≤0.05) for GP-III than GP-I and GP-II, average daily gain was similar between GP-I and GP-II but greater (p≤0.05) for GP-III. In addition, feed efficiency and related haematological variables did not differ due to treatments. Nutritional worth of GNC and RGM was highly comparable in terms of intake, digestibility and growth in growing calves. However, MGM was found to be more efficacious in improving growth rate than RGM at 75% replacement level of GNC protein.

  3. Replacing groundnut cake with gluten meals of rice and maize in diets for growing Sahiwal cattle

    Directory of Open Access Journals (Sweden)

    Tariq A. Malik

    2017-10-01

    Full Text Available Objective This experiment investigated the effect of isonitrogenous replacement of groundnut cake (GNC by rice gluten meal (RGM and maize gluten meal (MGM at 75% level on nutrient intake, apparent digestibility, growth performance and related blood constituents in growing Sahiwal cattle. Methods Eighteen Sahiwal calves were divided into three groups, based on average body weight (87.24 kg and age (6 to 12 mo, and treatments were assigned to the different groups randomly. The first group (GP-I was kept as control and received GNC-based concentrate mixture. In second (GP-II and third (GP-III groups, 750 g/kg nitrogen (N of GNC was substituted by RGM and MGM respectively, with similar forage:concentrate ratio (56:44. Results The 90 days of experimental feeding revealed that intake of dry matter, crude protein and digestibility coefficients for all nutrients did not differ among groups. Furthermore, although N balance was greater (p≤0.05 for GP-III than GP-I and GP-II, average daily gain was similar between GP-I and GP-II but greater (p≤0.05 for GP-III. In addition, feed efficiency and related haematological variables did not differ due to treatments. Conclusion Nutritional worth of GNC and RGM was highly comparable in terms of intake, digestibility and growth in growing calves. However, MGM was found to be more efficacious in improving growth rate than RGM at 75% replacement level of GNC protein.

  4. Proposal of a growth chamber for growing Super-Dwarf Rice in Space Agriculture

    Science.gov (United States)

    Hirai, Hiroaki; Kitaya, Yoshiaki; Tsukamoto, Koya; Yamashita, Youichirou; Hirai, Takehiro

    Space agriculture needs to be considered to supply food for space crew who stay in space over an extended time period. So far crops such as wheat, onion, oat, pea and lettuce grew to explore the possibility of space agriculture. Although rice is a staple food for most of the world, research on rice cultivation in space has not been done much. Rice grains are nutrient-rich with carbohydrate, protein and dietary fiber. Moreover, rice is a high yield crop and harvested grains have a long shelf life. However, the plant height of standard rice cultivars is relatively long, requiring much space. In addition, rice plants require higher light intensities for greater yield. For these reasons, it is difficult to establish facilities for rice culture in a limited space with a low cost. We propose to employee a super-dwarf cultivar and a small growth chamber with a new type of LEDs. The super-dwarf rice is a short-grain japonica variety and the plant height is approximately 20 cm that is one-fifth as tall as standard cultivars. The LED light used as a light source for this study can provide full spectrum of 380 nm to 750 nm. Air temperature and humidity were controlled by a Peltier device equipped in the chamber. The characteristics of the new type of LEDs and other equipments of the chamber and the ground based performance of super-dwarf rice plants grown in the chamber will be reported.

  5. Influence of sulfur on the accumulation of mercury in rice plant (Oryza sativa L.) growing in mercury contaminated soils.

    Science.gov (United States)

    Li, Yunyun; Zhao, Jiating; Guo, Jingxia; Liu, Mengjiao; Xu, Qinlei; Li, Hong; Li, Yu-Feng; Zheng, Lei; Zhang, Zhiyong; Gao, Yuxi

    2017-09-01

    Sulfur (S) is an essential element for plant growth and its biogeochemical cycling is strongly linked to the species of heavy metals in soil. In this work, the effects of S (sulfate and elemental sulfur) treatment on the accumulation, distribution and chemical forms of Hg in rice growing in Hg contaminated soil were investigated. It was found that S could promote the formation of iron plaque on the root surface and decrease total mercury (T-Hg) and methylmercury (MeHg) accumulation in rice grains, straw, and roots. Hg in the root was dominated in the form of RS-Hg-SR. Sulfate treatment increased the percentage of RS-Hg-SR to T-Hg in the rice root and changed the Hg species in soil. The dominant Hg species (70%) in soil was organic substance bound fractions. Sulfur treatment decreased Hg motility in the rhizosphere soils by promoting the conversion of RS-Hg-SR to HgS. This study is significant since it suggests that low dose sulfur treatment in Hg-containing water irrigated soil can decrease both T-Hg and MeHg accumulation in rice via inactivating Hg in the soil and promoting the formation of iron plaque in rice root, which may reduce health risk for people consuming those crops. Copyright © 2017. Published by Elsevier Ltd.

  6. The Growing Use of GMES across Europe’s Regions

    Directory of Open Access Journals (Sweden)

    Redazione GEOmedia

    2013-03-01

    Full Text Available Una guida per i decisori politici sulle potenzialità e ibenefici derivanti dall’uso delle tecnologie di monitoraggiodella Terra nelle regioni Europee Abstract The Growing Use of GMES across Europe’s Regions” LaunchEvent at the European Parliament.NEREUS – Network of European Regions Using Space Technologiesand ESA – European Space Agency, are pleased to announce the launch of a joint publication with the title “TheGrowing Use of GMES across Europe’s Regions”, a collection of 67 illustrative articles on regional GMES applications. Addressed to a non-specialist audience, the collection illustrates the strategic value of the Programme for regional administrations and authorities in the context of territorial management and forward planning. The variety of existing andpotential regional uses across Europe shows how GMES not only contributes to better informed decision making but also how the data can be exploited to support sustainable environmental protection with a long term perspective. Quoting end user experiences, the publication gives a first-hand impression on the impact of GMES on regional development and policy implementation.

  7. Cadmium content in rice and its daily intake in Ghaemshahr region ...

    African Journals Online (AJOL)

    This investigation surveyed Cadmium (Cd) content of Iranian rice (oryza saliva) which is predominant rice culture in north of Iran. A total of 60 samples were collected from Ghaemshahr region in Mazandaran province (North of Iran). The samples were collected in during harvesting of rice in field. The first step, grains of raw ...

  8. 32P tracer studies on the efficiency of ammonium nitrate phosphates and polyphosphates for growing rice on different soil types

    International Nuclear Information System (INIS)

    Sadanandan, A.K.; Mohanty, S.K.; Patnaik, S.; Mistry, K.B.

    1980-01-01

    A pot experiment was conducted with 32 P tagged phosphates to evaluate the efficiency of ammonium nitrate phosphate containing 30, 50 and 70 percent of P in the water soluble form, tri- and tetra-ammonium pyrophosphate, as compared with mono-ammonium ortho-phosphate (MAP) for growing rice on red, laterite and black soils, with regard to recovery of applied P in soil, dry matter production and utilization of applied P by crop at flowering and grain and straw yield at harvest. Ammonium nitrate phosphates containing 50 percent or more of P in the water soluble form could be used for growing rice on all soil types. The pyrophosphates were as efficient as MAP on soils having pH 6.2 and above but less efficient in soils of lower pH. (author)

  9. Studies on the application of gamma rays and chemical substances to rice growing

    Energy Technology Data Exchange (ETDEWEB)

    Gi, Ha Byong

    1985-01-10

    It was suggested that highly salt-resistant strains can be primarily selected among plenty of strains by constrasting the coefficient of biological salt-resistance in the early developing stage of the rice plant, and high-yielding strains can be firmly selected among these salt-resistant strains in the early developing stage, by transplanting these strains into the rice-field and by contrasting the coefficient of biological salt-resistance of them. It was confirmed that the salt-resistant character of the rice strains are differently manifested according to each developmental stage.

  10. MELNIK VINE-GROWING REGION – HISTORY AND TRADITIONS

    Directory of Open Access Journals (Sweden)

    Radoslava Ganeva

    2017-06-01

    Full Text Available The region of Melnik (Southwest Bulgaria has exclusively appropriate climate for wine growing. Its borders are defined by the dissemination of the wide Melnik grape vine, revealed by experts as an old local variety. Few are the wine-growing centers that carry such an effective ampelographic tradition. A few are the viticulture centers, bearing such effective tradition. The vine is grown here from the Thracian antiquity and is the basis for a livelihood, preserved and retransmitted for many generations. It is characterized by a specialization in the production and marketing of high quality red dry wines. The article deals with the development of the Melnik vineyard as a result of different political and economic conditions in the course of historical development. Various archival materials, specialized studies and personal fieldwork research have been used.

  11. Gravimorphism in rice and barley: promotion of leaf elongation by vertical inversion in agravitropically growing plants.

    Science.gov (United States)

    Abe, K; Takahashi, H; Suge, H

    1998-12-01

    We have compared shoot responses of agravitropic rice and barley plants to vertical inversion with those of normal ones. When rice plants were vertically inverted, the main stems of a japonica type of rice, cv. Kamenoo, showed negative gravitropism at nodes 2-15 of both elongated and non-elongated internodes. However, shoots of lazy line of rice, lazy-Kamenoo, bent gravitropically at nodes 11-15 only elongated internodes but not at nodes 2-10 of non-elongated ones. Thus, shoots of Kamenoo responded gravitropically at all stages of growth, whereas shoots of lazy-Kamenoo did not show gravitropic response before heading. In Kamenoo plants, lengths of both leaf-sheath and leaf-blade were shortened by vertical inversion, but those of the vertically inverted plants of lazy-Kamenoo were significantly longer than the plants in an upright position. When agravitropic and normal plants of barley were vertically inverted, the same results as in rice were obtained; elongation of both leaf-sheath and leaf-blade was inhibited in normal barley plants, Chikurin-Ibaragi No. 1, but significantly stimulated in agravitropic plants of serpentina barley. These results suggest that vertical inversion of rice and barley plants enhances the elongation growth of leaves in the absence of tropistic response.

  12. Video Segmentation Using Fast Marching and Region Growing Algorithms

    Directory of Open Access Journals (Sweden)

    Eftychis Sifakis

    2002-04-01

    Full Text Available The algorithm presented in this paper is comprised of three main stages: (1 classification of the image sequence and, in the case of a moving camera, parametric motion estimation, (2 change detection having as reference a fixed frame, an appropriately selected frame or a displaced frame, and (3 object localization using local colour features. The image sequence classification is based on statistical tests on the frame difference. The change detection module uses a two-label fast marching algorithm. Finally, the object localization uses a region growing algorithm based on the colour similarity. Video object segmentation results are shown using the COST 211 data set.

  13. Influence of growing and exploatation of bovins on regional agroecosystems

    Directory of Open Access Journals (Sweden)

    Cornel Podar

    2011-12-01

    Full Text Available Scientists all over the are concerned regarding the influence of growing ruminants on regional agro-ecosystems due to green house gases resulted (CO 2, CH4, N2O5. Cattle have contributed to environmental pollution in old industrial farming systems, when the cattle number in Romania, reached 8 million, manure evacuation was not solved and manure was accumulating around the farm polluting the soil, water and air. Low density of ruminants existing in the agricultural sector of the country is not significant in terms of pollution. Currently cattle have positive effects on the environment by the use of legumes, grasses and manure production contributing to the increase of agricultural production: crop production (sugar beet, potato and cereals, animal production (milk, meat, leather production and industrial production also (biogas, befouls, alcohol, oil production.

  14. Solid-state fermentation of rice straw residues for its use as growing medium in ornamental nurseries

    Science.gov (United States)

    Belal, Elsayed B.; El-Mahrouk, M. E.

    2010-11-01

    This work was conducted at a private nursery in Kafr El-Sheikh governorate to investigate the bioconversion of rice straw into a soil-like substrate (SLS) by Phanerochaete chrysosporium and Trichoderma hazianum and the possibility of using rice straw compost in ornamental nurseries as a partial or total replacement of coconut peat (CP) and vermiculite (V) in the growing medium. The results showed that rice straw could be treated better by aerobic fermentation. The authors used five mixtures as follows: (1) Control (CP+V at 1:1 v/v), (2) SLS (100%), (3) SLS+CP (1:1 v/v), (4) SLS+V (1:1 v/v), and (5) SLS+CP+V (1:1:1 v/v/v). Data were recorded as seedling height, no. of leaves, shoot fresh and dry weights, root length and root fresh and dry weights in order to assess the quality of both transplants of Althea rosea (hollyhock) and Calendula officinalis (scotch marigold). Hollyhock seedlings grown in medium containing a mixture of SLS+CP+V displayed quality traits similar to those recorded from the control treatment, while scotch marigold seedlings in the same medium followed the control medium in quality.

  15. Indigenous utilization of termite mounds and their sustainability in a rice growing village of the central plain of Laos

    Directory of Open Access Journals (Sweden)

    Sivilay Sengdeaune

    2011-08-01

    Full Text Available Abstract Background The objective of this study was to investigate the indigenous utilization of termite mounds and termites in a rain-fed rice growing village in the central plain of Laos, where rice production is low and varies year-to-year, and to assess the possibility of sustainable termite mound utilization in the future. This research was carried out from 2007 to 2009. Methods The termites were collected from their mounds and surrounding areas and identified. Twenty villagers were interviewed on their use of termites and their mounds in the village. Sixty-three mounds were measured to determine their dimensions in early March, early July and middle to late November, 2009. Results Eleven species of Termitidae were recorded during the survey period. It was found that the villagers use termite mounds as fertilizer for growing rice, vegetable beds and charcoal kilns. The villagers collected termites for food and as feed for breeding fish. Over the survey period, 81% of the mounds surveyed increased in volume; however, the volume was estimated to decrease by 0.114 m3 mound-1 year-1 on average due to several mounds being completely cut out. Conclusion It was concluded that current mound utilization by villagers is not sustainable. To ensure sustainable termite utilization in the future, studies should be conducted to enhance factors that promote mound restoration by termites. Furthermore, it will be necessary to improve mound conservation methods used by the villagers after changes in the soil mass of mounds in paddy fields and forests has been measured accurately. The socio-economic factors that affect mound utilization should also be studied.

  16. Indigenous utilization of termite mounds and their sustainability in a rice growing village of the central plain of Laos.

    Science.gov (United States)

    Miyagawa, Shuichi; Koyama, Yusaku; Kokubo, Mika; Matsushita, Yuichi; Adachi, Yoshinao; Sivilay, Sengdeaune; Kawakubo, Nobumitsu; Oba, Shinya

    2011-08-18

    The objective of this study was to investigate the indigenous utilization of termite mounds and termites in a rain-fed rice growing village in the central plain of Laos, where rice production is low and varies year-to-year, and to assess the possibility of sustainable termite mound utilization in the future. This research was carried out from 2007 to 2009. The termites were collected from their mounds and surrounding areas and identified. Twenty villagers were interviewed on their use of termites and their mounds in the village. Sixty-three mounds were measured to determine their dimensions in early March, early July and middle to late November, 2009. Eleven species of Termitidae were recorded during the survey period. It was found that the villagers use termite mounds as fertilizer for growing rice, vegetable beds and charcoal kilns. The villagers collected termites for food and as feed for breeding fish. Over the survey period, 81% of the mounds surveyed increased in volume; however, the volume was estimated to decrease by 0.114 m3 mound(-1) year(-1) on average due to several mounds being completely cut out. It was concluded that current mound utilization by villagers is not sustainable. To ensure sustainable termite utilization in the future, studies should be conducted to enhance factors that promote mound restoration by termites. Furthermore, it will be necessary to improve mound conservation methods used by the villagers after changes in the soil mass of mounds in paddy fields and forests has been measured accurately. The socio-economic factors that affect mound utilization should also be studied.

  17. Central Asia in Asia: Charting growing trans-regional linkages

    Directory of Open Access Journals (Sweden)

    Nicola P. Contessi

    2016-01-01

    Full Text Available As the so-called ‘Asian Century’ unfolds, Central Asian countries are increasingly directing their foreign relations eastward. Meanwhile, Asian states are equally turning to Central Asia in their search for energy resources and new markets. This dual dynamic is giving rise to closer and deeper ties in three key areas. As far as infrastructures are concerned, various Asian powers have adopted Silk Road policies that see Central Asia as a fundamental transit route for their long-haul connectivity projects. In the field of trade, Central Asia's exchanges with other Asian countries have been growing steadily since the 1990s, in some cases even coming to rival, in comparative terms, exchanges with the West. Lastly, in terms of multilateralism, Central Asia is increasingly enmeshed in a web of overlapping institutions with a strong Asian identity, coexisting with the region's Western institutional references. The article then problematizes this emerging pattern by sketching out some of the possible ramifications that could stem from the sustainment and consolidation of these trends for the international order and the global balance of power.

  18. Enhanced DEA model with undesirable output and interval data for rice growing farmers performance assessment

    Energy Technology Data Exchange (ETDEWEB)

    Khan, Sahubar Ali Mohd. Nadhar, E-mail: sahubar@uum.edu.my; Ramli, Razamin, E-mail: razamin@uum.edu.my; Baten, M. D. Azizul, E-mail: baten-math@yahoo.com [School of Quantitative Sciences, UUM College of Arts and Sciences, Universiti Utara Malaysia, 06010 Sintok, Kedah (Malaysia)

    2015-12-11

    Agricultural production process typically produces two types of outputs which are economic desirable as well as environmentally undesirable outputs (such as greenhouse gas emission, nitrate leaching, effects to human and organisms and water pollution). In efficiency analysis, this undesirable outputs cannot be ignored and need to be included in order to obtain the actual estimation of firms efficiency. Additionally, climatic factors as well as data uncertainty can significantly affect the efficiency analysis. There are a number of approaches that has been proposed in DEA literature to account for undesirable outputs. Many researchers has pointed that directional distance function (DDF) approach is the best as it allows for simultaneous increase in desirable outputs and reduction of undesirable outputs. Additionally, it has been found that interval data approach is the most suitable to account for data uncertainty as it is much simpler to model and need less information regarding its distribution and membership function. In this paper, an enhanced DEA model based on DDF approach that considers undesirable outputs as well as climatic factors and interval data is proposed. This model will be used to determine the efficiency of rice farmers who produces undesirable outputs and operates under uncertainty. It is hoped that the proposed model will provide a better estimate of rice farmers’ efficiency.

  19. Enhanced DEA model with undesirable output and interval data for rice growing farmers performance assessment

    International Nuclear Information System (INIS)

    Khan, Sahubar Ali Mohd. Nadhar; Ramli, Razamin; Baten, M. D. Azizul

    2015-01-01

    Agricultural production process typically produces two types of outputs which are economic desirable as well as environmentally undesirable outputs (such as greenhouse gas emission, nitrate leaching, effects to human and organisms and water pollution). In efficiency analysis, this undesirable outputs cannot be ignored and need to be included in order to obtain the actual estimation of firms efficiency. Additionally, climatic factors as well as data uncertainty can significantly affect the efficiency analysis. There are a number of approaches that has been proposed in DEA literature to account for undesirable outputs. Many researchers has pointed that directional distance function (DDF) approach is the best as it allows for simultaneous increase in desirable outputs and reduction of undesirable outputs. Additionally, it has been found that interval data approach is the most suitable to account for data uncertainty as it is much simpler to model and need less information regarding its distribution and membership function. In this paper, an enhanced DEA model based on DDF approach that considers undesirable outputs as well as climatic factors and interval data is proposed. This model will be used to determine the efficiency of rice farmers who produces undesirable outputs and operates under uncertainty. It is hoped that the proposed model will provide a better estimate of rice farmers’ efficiency

  20. Enhanced DEA model with undesirable output and interval data for rice growing farmers performance assessment

    Science.gov (United States)

    Khan, Sahubar Ali Mohd. Nadhar; Ramli, Razamin; Baten, M. D. Azizul

    2015-12-01

    Agricultural production process typically produces two types of outputs which are economic desirable as well as environmentally undesirable outputs (such as greenhouse gas emission, nitrate leaching, effects to human and organisms and water pollution). In efficiency analysis, this undesirable outputs cannot be ignored and need to be included in order to obtain the actual estimation of firms efficiency. Additionally, climatic factors as well as data uncertainty can significantly affect the efficiency analysis. There are a number of approaches that has been proposed in DEA literature to account for undesirable outputs. Many researchers has pointed that directional distance function (DDF) approach is the best as it allows for simultaneous increase in desirable outputs and reduction of undesirable outputs. Additionally, it has been found that interval data approach is the most suitable to account for data uncertainty as it is much simpler to model and need less information regarding its distribution and membership function. In this paper, an enhanced DEA model based on DDF approach that considers undesirable outputs as well as climatic factors and interval data is proposed. This model will be used to determine the efficiency of rice farmers who produces undesirable outputs and operates under uncertainty. It is hoped that the proposed model will provide a better estimate of rice farmers' efficiency.

  1. Effects of full fat rice bran and defatted rice bran on growth performance and carcass characteristics of growing-finishing pigs.

    Science.gov (United States)

    Casas, Gloria A; Overholt, Martin F; Dilger, Anna C; Boler, Dustin D; Stein, Hans H

    2018-06-04

    The objective was to test the hypothesis that increasing inclusion levels of full fat rice bran (FFRB) or defatted rice bran (DFRB) are not detrimental to growth or carcass characteristics, longissimus muscle (LM) quality, or fat quality when fed to growing-finishing pigs. A total of 224 barrows and gilts were randomly allotted to 7 treatments, with 4 pigs per pen and 8 pen replicates per treatment. Pigs had an average initial BW of 28.2 ± 4.1 kg and a 3-phase feeding program was used. A basal diet containing corn and soybean meal, 3 diets containing corn, soybean meal, and 10, 20, or 30% FFRB, and 3 diets containing corn, soybean meal, and 10, 20, or 30% DFRB were formulated within each phase. Daily feed allotments and pig BW at the start of the experiment and at the conclusion of each phase were recorded. On the last day of the experiment, 1 pig per pen was harvested and carcass characteristics, LM quality, and fat quality were determined. For the overall experimental period, no effects of dietary treatments were observed for average daily gain. However, average daily feed intake (ADFI) decreased (linear, P < 0.05) and gain to feed ratio (G:F) increased (linear, P < 0.05) for pigs fed diets with increasing concentrations of FFRB. In contrast, ADFI increased linearly (P < 0.05) and G:F decreased (linear, P < 0.05) as DFRB was included in the diets. There were no effects of dietary treatments on LM quality. The length of the bellies decreased (linear and quadratic, P < 0.05) as the inclusion of FFRB or DFRB increased in the diets. The concentration of crude fat in the adipose tissue of pigs increased linearly (P < 0.05) as the concentration of FFRB or DFRB increased in the diets. The concentration of saturated fatty acids in the adipose tissue of pigs fed diets containing FFRB decreased (linear, P < 0.05), whereas the concentration of polyunsaturated fatty acids (PUFA) increased (linear, P < 0.05). In contrast, addition of DFRB did not affect the concentration of

  2. YIELD PERFORMANCE AND ADAPTATION OF PROMISING AMPHIBIOUS RED RICE LINES ON SIX GROWING ENVIRONMENTS IN LOMBOK, INDONESIA

    Directory of Open Access Journals (Sweden)

    I.G.P. Muliarta Aryana

    2016-02-01

    Full Text Available The objectives of this study were to examine yield performance of promising amphibious red rice lines, and to evaluate their adaptability to six growing environments in Lombok, Indonesia. Ten promising amphibious red rice lines were tested together with their three parents and one national cultivar (Aek Sibundong, during the rainy extended to dry season 2014 (JanuaryJune 2014. The ten promising lines were obtained from two population sources, while the three parents were AKBC52, AKBC86, and a local cultivar, i.e. Kala Isi Tolo (KIT. The testing environments were lowland in Mambalan village (West Lombok, medium highland in Mantang village (Central Lombok, and highland in East Sembalun village (East Lombok, and each location consisted of two systems, i.e. flooded and dry (upland systems. The experiment in each environment was designed according to Randomized Complete Block Design, with three replications and 14 genotypes as the treatments. Adaptation analysis was based on ANOVA using AMMI and Biplot. The results indicated that among the 14 genotypes, G10(F2BC4A52-42 showed the highest yield, with an average of 7.8 t ha-1 dry seeds. There was a significant Genotype x Environment interaction on the dry seed yield. Biplot analysis indicated that G2(F2BC4A52-44 and G8(F2BC4A52-37 were stable genotypes across locations.

  3. Assessment of the Growing Season Regime Region of Tanzania ...

    African Journals Online (AJOL)

    The growing period for most crops continues beyond the rainy season and, to a greater or lesser extent, crops often mature on moisture reserves stored in the soil profile. When the rains start early the season is likely to be· longer, however, early rainfall (November) over unimodal areas is variable (Mhita and Nassib, 1988).

  4. Rice growing farmers efficiency measurement using a slack based interval DEA model with undesirable outputs

    Science.gov (United States)

    Khan, Sahubar Ali Mohd. Nadhar; Ramli, Razamin; Baten, M. D. Azizul

    2017-11-01

    In recent years eco-efficiency which considers the effect of production process on environment in determining the efficiency of firms have gained traction and a lot of attention. Rice farming is one of such production processes which typically produces two types of outputs which are economic desirable as well as environmentally undesirable. In efficiency analysis, these undesirable outputs cannot be ignored and need to be included in the model to obtain the actual estimation of firm's efficiency. There are numerous approaches that have been used in data envelopment analysis (DEA) literature to account for undesirable outputs of which directional distance function (DDF) approach is the most widely used as it allows for simultaneous increase in desirable outputs and reduction of undesirable outputs. Additionally, slack based DDF DEA approaches considers the output shortfalls and input excess in determining efficiency. In situations when data uncertainty is present, the deterministic DEA model is not suitable to be used as the effects of uncertain data will not be considered. In this case, it has been found that interval data approach is suitable to account for data uncertainty as it is much simpler to model and need less information regarding the underlying data distribution and membership function. The proposed model uses an enhanced DEA model which is based on DDF approach and incorporates slack based measure to determine efficiency in the presence of undesirable factors and data uncertainty. Interval data approach was used to estimate the values of inputs, undesirable outputs and desirable outputs. Two separate slack based interval DEA models were constructed for optimistic and pessimistic scenarios. The developed model was used to determine rice farmers efficiency from Kepala Batas, Kedah. The obtained results were later compared to the results obtained using a deterministic DDF DEA model. The study found that 15 out of 30 farmers are efficient in all cases. It

  5. Regional and seasonal analyses of weights in growing Angus cattle.

    Science.gov (United States)

    Bradford, H L; Fragomeni, B O; Bertrand, J K; Lourenco, D A L; Misztal, I

    2016-10-01

    This study evaluated the impact of region and season on growth in Angus seed stock. To assess geographic differences, the United States was partitioned into 9 regions based on similar climate and topography related to cow-calf production. Seasonal effects were associated with the month that animals were weighed. The American Angus Association provided growth data, and records were assigned to regions based on the owner's zip code. Most Angus cattle were in the Cornbelt, Lower Plains, Rocky Mountain, Upper Plains, and Upper South regions, with proportionally fewer Angus in Texas compared with the national cow herd. Most calves were born in the spring, especially February and March. Weaning weights (WW; = 49,886) and yearling weights (YW; = 45,168) were modeled with fixed effects of age-of-dam class (WW only), weigh month, region, month-region interaction, and linear covariate of age. Random effects included contemporary group nested within month-region combination and residual. The significant month-region interaction ( Angus seed stock producers have used calving seasons to adapt to the specific environmental conditions in their regions and to optimize growth in young animals.

  6. An automatic approach for rice mapping in temperate region using time series of MODIS imagery: first results for Mediterranean environment

    Science.gov (United States)

    Boschetti, M.; Nelson, A.; Manfrom, G.; Brivio, P. A.

    2012-04-01

    Timely and accurate information on crop typology and status are required to support suitable action to better manage agriculture production and reduce food insecurity. More specifically, regional crop masking and phenological information are important inputs for spatialized crop growth models for yield forecasting systems. Digital cartographic data available at global/regional scale, such as GLC2000, GLOBCOVER or MODIS land cover products (MOD12), are often not adequate for this crop modeling application. For this reason, there is a need to develop and test methods that can provide such information for specific cropsusing automated classification techniques.. In this framework we focused our analysis on the rice cultivation area detection due to the importance of this crop. Rice is a staple food for half of the world's population (FAO 2004). Over 90% of the world's rice is produced and consumed in Asia and the region is home to 70% of the world's poor, most of whom depend on rice for their livelihoods andor food security. Several initiatives are being promoted at the international level to provide maps of rice cultivated areas in South and South East Asia using different approaches available in literature for rice mapping in tropical regions. We contribute to these efforts by proposing an automatic method to detect rice cultivated areas in temperate regions exploiting MODIS 8-Day composite of Surface Reflectance at 500m spatial resolution (MOD09A1product). Temperate rice is cultivated worldwide in more than 20 countries covering around 16M ha for a total production of about 65M tons of paddy per year. The proposed method is based on a common approach available in literature that first identifies flood condition that can be related to rice agronomic practice and then checks for vegetation growth. The method presents innovative aspects related both to the flood detection, exploiting Short Wave Infrared spectral information, and to the crop grow monitoring analyzing

  7. Development of techniques for storing rough rice in cold regions, 1: Storage of rough rice at country elevator with natural heat radiation in winter

    International Nuclear Information System (INIS)

    Takekura, K.; Kawamura, S.; Itoh, K.

    2003-01-01

    An on-farm experiment in which 361 metric tons of rough rice was stored in a silo from November until July was conducted at a country elevator in Hokkaido to develop new techniques for storing rough rice in cold regions. The temperature of the rough rice near the inner silo wall decreased to below ice point (-5°C) due to natural heat radiation in winter, which the temperature of the rough rice in the center of the silo was maintained at almost the same temperature as that at the beginning of storage (5°C). Ventilation in the upper vacant space of the silo prevented moisture condensation on the inside surface of the silo during storage. When the cold rough rice was unloaded from the silo in summer, an unheated forced-air drier was used to increase the temperature of rough rice to above the dew point temperature of surrounding air. During the unloading and rewarming process, the moisture content of the rough rice increased due to moisture condensation on the grain from the air. However, the husks first absorbed the condensation and then the moisture slowly permeated into the brown rice kernel. Thus the rewarming process didn't cause any fissures in the brown rice. The results of the experiment indicate that condensation on rough rice doesn't give rise to any problems

  8. Heavy Metal Pollution in a Soil-Rice System in the Yangtze River Region of China.

    Science.gov (United States)

    Liu, Zhouping; Zhang, Qiaofen; Han, Tiqian; Ding, Yanfei; Sun, Junwei; Wang, Feijuan; Zhu, Cheng

    2015-12-22

    Heavy metals are regarded as toxic trace elements in the environment. Heavy metal pollution in soil or rice grains is of increasing concern. In this study, 101 pairs of soil and rice samples were collected from the major rice-producing areas along the Yangtze River in China. The soil properties and heavy metal (i.e., Cd, Hg, Pb and Cr) concentrations in the soil and rice grains were analyzed to evaluate the heavy metal accumulation characteristics of the soil-rice systems. The results showed that the Cd, Hg, Pb and Cr concentrations in the soil ranged from 0.10 to 4.64, 0.01 to 1.46, 7.64 to 127.56, and 13.52 to 231.02 mg·kg(-)¹, respectively. Approximately 37%, 16%, 60% and 70% of the rice grain samples were polluted by Cd, Hg, Pb, and Cr, respectively. The degree of heavy metal contamination in the soil-rice systems exhibited a regional variation. The interactions among the heavy metal elements may also influence the migration and accumulation of heavy metals in soil or paddy rice. The accumulation of heavy metals in soil and rice grains is related to a certain extent to the pH and soil organic matter (SOM). This study provides useful information regarding heavy metal accumulation in soil to support the safe production of rice in China. The findings from this study also provide a robust scientific basis for risk assessments regarding ecological protection and food safety.

  9. Heavy Metal Pollution in a Soil-Rice System in the Yangtze River Region of China

    Directory of Open Access Journals (Sweden)

    Zhouping Liu

    2015-12-01

    Full Text Available Heavy metals are regarded as toxic trace elements in the environment. Heavy metal pollution in soil or rice grains is of increasing concern. In this study, 101 pairs of soil and rice samples were collected from the major rice-producing areas along the Yangtze River in China. The soil properties and heavy metal (i.e., Cd, Hg, Pb and Cr concentrations in the soil and rice grains were analyzed to evaluate the heavy metal accumulation characteristics of the soil-rice systems. The results showed that the Cd, Hg, Pb and Cr concentrations in the soil ranged from 0.10 to 4.64, 0.01 to 1.46, 7.64 to 127.56, and 13.52 to 231.02 mg·kg−1, respectively. Approximately 37%, 16%, 60% and 70% of the rice grain samples were polluted by Cd, Hg, Pb, and Cr, respectively. The degree of heavy metal contamination in the soil-rice systems exhibited a regional variation. The interactions among the heavy metal elements may also influence the migration and accumulation of heavy metals in soil or paddy rice. The accumulation of heavy metals in soil and rice grains is related to a certain extent to the pH and soil organic matter (SOM. This study provides useful information regarding heavy metal accumulation in soil to support the safe production of rice in China. The findings from this study also provide a robust scientific basis for risk assessments regarding ecological protection and food safety.

  10. Heavy Metal Pollution in a Soil-Rice System in the Yangtze River Region of China

    Science.gov (United States)

    Liu, Zhouping; Zhang, Qiaofen; Han, Tiqian; Ding, Yanfei; Sun, Junwei; Wang, Feijuan; Zhu, Cheng

    2015-01-01

    Heavy metals are regarded as toxic trace elements in the environment. Heavy metal pollution in soil or rice grains is of increasing concern. In this study, 101 pairs of soil and rice samples were collected from the major rice-producing areas along the Yangtze River in China. The soil properties and heavy metal (i.e., Cd, Hg, Pb and Cr) concentrations in the soil and rice grains were analyzed to evaluate the heavy metal accumulation characteristics of the soil-rice systems. The results showed that the Cd, Hg, Pb and Cr concentrations in the soil ranged from 0.10 to 4.64, 0.01 to 1.46, 7.64 to 127.56, and 13.52 to 231.02 mg·kg−1, respectively. Approximately 37%, 16%, 60% and 70% of the rice grain samples were polluted by Cd, Hg, Pb, and Cr, respectively. The degree of heavy metal contamination in the soil-rice systems exhibited a regional variation. The interactions among the heavy metal elements may also influence the migration and accumulation of heavy metals in soil or paddy rice. The accumulation of heavy metals in soil and rice grains is related to a certain extent to the pH and soil organic matter (SOM). This study provides useful information regarding heavy metal accumulation in soil to support the safe production of rice in China. The findings from this study also provide a robust scientific basis for risk assessments regarding ecological protection and food safety. PMID:26703698

  11. Isotopic tracer studies to evaluate relative efficiency of different forms of P for growing rice on different soil types

    Energy Technology Data Exchange (ETDEWEB)

    Dash, R N; Mohanty, S K; Patnaik, S [Central Rice Research Inst., Cuttack (India)

    1977-12-01

    The relative efficiency of different forms of P in relation to their time of application for growing rice on different soil types has been studied by using /sup 32/P tagged mono-, di-, and tri-calcium phosphate, ammonium nitrate phosphate containing all the P in the citrate-soluble form and potassium meta-phosphate. P-deficient acid laterite soil from Burdwan, red loam soil from Peramanpur and calcareous black soil from Hyderabad were used in the study. The different P forms were found to be compatible in the acid, red and laterite soils when the phosphorus forms were primed to moist acid soils 2 weeks prior to flooding. On application at flooding, fertilizers containing citrate-soluble phosphate were found to be less effective as compared to those containing water-soluble phosphate. In the calcareous black soil, however, the fertilizers, containing insoluble or citrate-soluble phosphates were not as efficient as the water-soluble forms, possibly because of lack of dissolution process. Potassium meta-phosphate was found to be effective in all the soil types whether applied at flooding or primed to the moist soil.

  12. Isotopic tracer studies to evaluate relative efficiency of different forms of P for growing rice on different soil types

    International Nuclear Information System (INIS)

    Dash, R.N.; Mohanty, S.K.; Patnaik, S.

    1977-01-01

    The relative efficiency of different forms of P in relation to their time of application for growing rice on different soil types has been studied by using 32 P tagged mono-, di-, and tri-calcium phosphate, ammonium nitrate phosphate containing all the P in the citrate-soluble form and potassium meta-phosphate. P-deficient acid laterite soil from Burdwan, red loam soil from Peramanpur and calcareous black soil from Hyderabad were used in the study. The different P forms were found to be compatible in the acid, red and laterite soils when the phosphorus forms were primed to moist acid soils 2 weeks prior to flooding. On application at flooding, fertilizers containing citrate-soluble phosphate were found to be less effective as compared to those containing water-soluble phosphate. In the calcareous black soil, however, the fertilizers, containing insoluble or citrate-soluble phosphates were not as efficient as the water-soluble forms, possibly because of lack of dissolution process. Potassium meta-phosphate was found to be effective in all the soil types whether applied at flooding or primed to the moist soil. (M.G.B.)

  13. Studies on the abnormality of embryo sac and pollen fertility in aurotetraploid rice during different growing seasons

    International Nuclear Information System (INIS)

    Shahid, M.; Jilanfan, S.; Changmin, W.; Peng, Z.; Xiang-dong, X.

    2010-01-01

    Auto tetraploid rice has a great genetic potential but low seed setting rate is the major encumbrance in its use. Embryo sac fertility and pollen fertility are the most important factors which affect the seed setting rate in auto tetraploid rice. Whole mount eosin B-staining confocal laser scanning microscopy (WE-CLSM) was used to study the fertility and abnormalities in embryo sacs of diploid and auto tetraploid rice during different seasons. The results indicated that the embryo sac fertility (64.5%) was much low in auto tetraploid than that in diploid rice (86%), and five main types of abnormal embryo sac were found in all 10 auto tetraploid rice. Moreover, some other type abnormal embryo sacs were also observed in auto tetraploid rice. Embryo sac without female germ unit and embryo sac degeneration were the most frequent types of abnormalities in auto tetraploid rice. Embryo sac fertility ranged from 49.3% to 79.3%, pollen fertility ranged from 56.2 to 85.9%, and seed setting rate varied from 12.5 to 69.01% in various genotypes of auto tetraploid rice. Embryo sac and pollen fertility were found to have a significant correlation with seed setting rate. Seasons have significant effect on pollen and embryo sac fertility in both type of rice. All the auto tetraploid lines exhibited different types of embryo sac abnormalities which indicated that these might be related to different genotypes. (author)

  14. RiceAtlas, a spatial database of global rice calendars and production.

    Science.gov (United States)

    Laborte, Alice G; Gutierrez, Mary Anne; Balanza, Jane Girly; Saito, Kazuki; Zwart, Sander J; Boschetti, Mirco; Murty, M V R; Villano, Lorena; Aunario, Jorrel Khalil; Reinke, Russell; Koo, Jawoo; Hijmans, Robert J; Nelson, Andrew

    2017-05-30

    Knowing where, when, and how much rice is planted and harvested is crucial information for understanding the effects of policy, trade, and global and technological change on food security. We developed RiceAtlas, a spatial database on the seasonal distribution of the world's rice production. It consists of data on rice planting and harvesting dates by growing season and estimates of monthly production for all rice-producing countries. Sources used for planting and harvesting dates include global and regional databases, national publications, online reports, and expert knowledge. Monthly production data were estimated based on annual or seasonal production statistics, and planting and harvesting dates. RiceAtlas has 2,725 spatial units. Compared with available global crop calendars, RiceAtlas is nearly ten times more spatially detailed and has nearly seven times more spatial units, with at least two seasons of calendar data, making RiceAtlas the most comprehensive and detailed spatial database on rice calendar and production.

  15. Mapping and characterizing mangrove rice growing environments in West-Africa using remote sensing and secondary data

    NARCIS (Netherlands)

    Adefurin, O.; Hamdy, M; Zwart, S.J.

    2016-01-01

    Rice is one of the major staple foods consumed in Africa and its demand continues to increase as a result of population growth, urbanization and changing diets. Mangrove rice cultivation is of importance along the West-African Atlantic coast from Senegal and Gambia down to Guinea-Bissau,

  16. /sup 32/P tracer studies on the efficiency of ammonium nitrate phosphates and polyphosphates for growing rice on different soil types

    Energy Technology Data Exchange (ETDEWEB)

    Sadanandan, A K; Mohanty, S K; Patnaik, S [Central Rice Research Inst., Cuttack (India); Mistry, K B [Bhabha Atomic Research Centre, Bombay (India). Biology and Agriculture Div.

    1980-12-01

    A pot experiment was conducted with /sup 32/P tagged phosphates to evaluate the efficiency of ammonium nitrate phosphate containing 30, 50 and 70 percent of P in the water soluble form, tri- and tetra-ammonium pyrophosphate, as compared with mono-ammonium ortho-phosphate (MAP) for growing rice on red, laterite and black soils, with regard to recovery of applied P in soil, dry matter production and utilization of applied P by crop at flowering and grain and straw yield at harvest. Ammonium nitrate phosphates containing 50 percent or more of P in the water soluble form could be used for growing rice on all soil types. The pyrophosphates were as efficient as MAP on soils having pH 6.2 and above but less efficient in soils of lower pH.

  17. Fiscal 1998 achievement report. Venture business raising type regional consortium - Small business creation base type (Development of nursery tray pickup robot and transport system for rice or vegetable growing); 1998 nendo suito oyobi yasai nado no hako ikubyo no robot naetori hanso system no kaihatsu (dai 2 nendo) seika hokokusho

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2000-03-01

    The project aims to develop energy conservation technologies through robotizing the processes of uprooting and conveying rice or vegetable seedlings. In fiscal 1998, the task covered root cutting and seedling uprooting, and a method was designed in which seedlings were uprooted through the intermediary of strings placed to run under the nursery trays. An effort was started to build an experimental root-cutting/seedling-pickup device. Systems for housing and conveying seedling trays were built simultaneously with a seedling tray loading system. In fiscal 1999, the root-cutting/seedling-pickup device was tested repeatedly for its seedling-pickup performance, and was modified. The nursery tray housing and conveying system accommodates a total of 84 trays in a 2-line 7-stage arrangement with 6 trays mounted on each stage. The conveyance speed was set at 0.4m/s-0.5m/s, and the trays travelled with stability in the system house. As for tray loading, an experimental device was built in which the mechanism for replacing empty trays with full trays had been changed from the turn table mechanism to a lateral movement type. Tests were conducted and it was demonstrated that the experimental device operated smoothly. A commercialization survey was conducted, and a conclusion was reached that a quarter of the target farmers in Hokkaido would positively accept the new technologies and adopt this system. (NEDO)

  18. Production of pulse in mono-cropped rice system in the coastal region of Eastern India

    International Nuclear Information System (INIS)

    Khan, A.R.; Nanda, P.; Chandra, Dinesh; Ghorai, A.K.; Behera, M.S.

    2001-04-01

    This experiment was undertaken with an objective to increase the yield of black-gram leguminous pulse crop through optimal doses of phosphatic fertilizer with supplemental irrigation in mono-cropped rice-fallow regions of India. Irrigation and phosphorus fertilizer application were introduced for enhancing productivity of black-gram to provide better returns to available water resources

  19. Medicinal plants growing in the Judea region: network approach for searching potential therapeutic targets

    Directory of Open Access Journals (Sweden)

    Arie Budovsky

    2012-09-01

    Full Text Available Plants growing in the Judea region are widely used in traditional medicine of the Levant region. Nevertheless, they have not so far been sufficiently analyzed and their medicinal potential has not been evaluated. This study is the first attempt to fill the gap in the knowledge of the plants growing in the region. Comprehensive data mining of online botanical databases and peer-reviewed scientific literature including ethno-pharmacological surveys from the Levant region was applied to compile a full list of plants growing in the Judea region, with the focus on their medicinal applications. Around 1300 plants growing in the Judea region were identified. Of them, 25% have medicinal applications which were analyzed in this study. Screening for chemical-protein interactions, together with the network-based analysis of potential targets, will facilitate discovery and therapeutic applications of the Judea region plants. Such an approach could also be applied as an integrative platform for further searching the potential therapeutic targets of plants growing in other regions of the world.

  20. Mercury methylation, export and bioaccumulation in rice agriculture - model results from comparative and experimental studies in 3 regions of the California Delta, USA

    Science.gov (United States)

    Windham-Myers, L.; Fleck, J.; Eagles-Smith, C.; Ackerman, J.

    2013-12-01

    Seasonally flooded wetland ecosystems are often poised for mercury (Hg) methylation, thus becoming sources of methylmercury (MeHg) to in situ and downstream biota. The seasonal flooding associated with cultivation of rice (Oryza sativa) also generates MeHg, which may be stored in sediment or plants, bioaccumulated into fauna, degraded or exported, depending on hydrologic and seasonal conditions. While many U.S. waters are regulated for total Hg concentrations based on fish targets, California's Sacramento-San Joaquin Delta (Delta) will soon implement the first MeHg total maximum daily load (TMDL) control program. Since 2007, a conceptual model (DRERIP-MCM) and several ecosystem-level studies have been advanced to better understand the mechanisms behind Hg methylation, export and bioaccumulation within Delta wetlands, including rice agriculture. Three Delta rice-growing regions (Yolo Bypass, Cosumnes River, Central Delta) of varied soil characteristics, mining influences and hydrology, were monitored over full crop years to evaluate annual MeHg dynamics. In addition to fish tissue Hg accumulation, a broad suite of biogeochemical and hydrologic indices were assessed and compared between wetland types, seasons, and regions. In general, Delta rice fields were found to export MeHg during the post-harvest winter season, and promote MeHg uptake in fish and rice grain during the summer growing season. As described in a companion presentation (Eagles-Smith et al., this session), the experimental Cosumnes River study suggests that rice-derived dissolved organic carbon (DOC) fuels MeHg production and uptake into aquatic foodwebs. Explicit DRERIP-MCM linkages for the role of rice-DOC in MeHg production, export and bioaccumulation were verified across two summers (2011, 2012): rice biomass and root productivity influenced porewater DOC availability and microbial processes, which drove sediment MeHg production and flux to surface water, promoting MeHg bioaccumulation in fish

  1. Genetic structure and diversity of indigenous rice (Oryza sativa) varieties in the Eastern Himalayan region of Northeast India.

    Science.gov (United States)

    Choudhury, Baharul; Khan, Mohamed Latif; Dayanandan, Selvadurai

    2013-12-01

    The Eastern Himalayan region of Northeast (NE) India is home to a large number of indigenous rice varieties, which may serve as a valuable genetic resource for future crop improvement to meet the ever-increasing demand for food production. However, these varieties are rapidly being lost due to changes in land-use and agricultural practices, which favor agronomically improved varieties. A detailed understanding of the genetic structure and diversity of indigenous rice varieties is crucial for efficient utilization of rice genetic resources and for developing suitable conservation strategies. To explore the genetic structure and diversity of rice varieties in NE India, we genotyped 300 individuals of 24 indigenous rice varieties representing sali, boro, jum and glutinous types, 5 agronomically improved varieties, and one wild rice species (O. rufipogon) using seven SSR markers. A total of 85 alleles and a very high level of gene diversity (0.776) were detected among the indigenous rice varieties of the region. Considerable level of genetic variation was found within indigenous varieties whereas improved varieties were monoporphic across all loci. The comparison of genetic diversity among different types of rice revealed that sali type possessed the highest gene diversity (0.747) followed by jum (0.627), glutinous (0.602) and boro (0.596) types of indigenous rice varieties, while the lowest diversity was detected in agronomically improved varieties (0.459). The AMOVA results showed that 66% of the variation was distributed among varieties indicating a very high level of genetic differentiation in rice varieties in the region. Two major genetically defined clusters corresponding to indica and japonica groups were detected in rice varieties of the region. Overall, traditionally cultivated indigenous rice varieties in NE India showed high levels of genetic diversity comparable to levels of genetic diversity reported from wild rice populations in various parts of the

  2. Trace elements in native and improved paddy rice from different climatic regions of Sri Lanka: implications for public health.

    Science.gov (United States)

    Diyabalanage, Saranga; Navarathna, Thamara; Abeysundara, Hemalika T K; Rajapakse, Sanath; Chandrajith, Rohana

    2016-01-01

    Samples of 226 new improved and 21 indigenous rice ( Oryza sativa L.) varieties were collected from the rice fields in three climatic zones of Sri Lanka and concentrations of 18 trace elements (Li, B, Al, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Se, Sr, Mo, Cd, Ba, Pb and Bi) were measured giving particular emphasis on Se, Cd and As using ICP-MS. The two way multivariate analysis of variance (MANOVA) method was employed to identify the differences in composition among rice from different climatic zones. The mean values obtained for both white and red rice were Se (36; 25 µg/kg), As (42; 45 µg/kg) and Cd (70; 123 µg/kg) on dry weight basis. However mean content of Se, As and Cd of native rice varieties were 69, 74 and 33 µg/kg, respectively. Statistical interpretations showed that in the majority of cases, there was a significant difference in Cd content among climatic zones whereas Se and Pb show differences between white and red rice varieties. Arsenic did not indicate any significant difference either between rice types or among climatic regions. Notably Se and As contents in indigenous rice were higher than that of improved rice types. To assess the safety of dietary of intake, daily intake of Se, Cd and As by rice were calculated. Non-gender specific Estimated Daily Intake (EDI) of Se, Cd and As consuming improved rice are 9.31, 24.1 and 12.2 µg day -1 , respectively. Since over 50 % of daily meals of people contain rice or rice based products, Se intake is expected to be deficient among the Sri Lankan population.

  3. Improving nitrogen management via a regional management plan for Chinese rice production

    Science.gov (United States)

    Wu, Liang; Chen, Xinping; Cui, Zhenling; Wang, Guiliang; Zhang, Weifeng

    2015-09-01

    A lack of basic information on optimal nitrogen (N) management often results in over- or under-application of N fertilizer in small-scale intensive rice farming. Here, we present a new database of N input from a survey of 6611 small-scale rice farmers and rice yield in response to added N in 1177 experimental on-farm tests across eight agroecological subregions of China. This database enables us to evaluate N management by farmers and develop an optimal approach to regional N management. We also investigated grain yield, N application rate, and estimated greenhouse gas (GHG) emissions in comparison to N application and farming practices. Across all farmers, the average N application rate, weighted by the area of rice production in each subregion, was 210 kg ha-1 and ranged from 30 to 744 kg ha-1 across fields and from 131 to 316 kg ha-1 across regions. The regionally optimal N rate (RONR) determined from the experiments averaged 167 kg ha-1 and varied from 114 to 224 kg N ha-1 for the different regions. If these RONR were widely adopted in China, approximately 56% of farms would reduce their use of N fertilizer, and approximately 33% would increase their use of N fertilizer. As a result, grain yield would increase by 7.4% from 7.14 to 7.67 Mg ha-1, and the estimated GHG emissions would be reduced by 11.1% from 1390 to 1236 kg carbon dioxide (CO2) eq Mg-1 grain. These results suggest that to achieve the goals of improvement in regional yield and sustainable environmental development, regional N use should be optimized among N-poor and N-rich farms and regions in China.

  4. Improving nitrogen management via a regional management plan for Chinese rice production

    International Nuclear Information System (INIS)

    Wu, Liang; Chen, Xinping; Cui, Zhenling; Wang, Guiliang; Zhang, Weifeng

    2015-01-01

    A lack of basic information on optimal nitrogen (N) management often results in over- or under-application of N fertilizer in small-scale intensive rice farming. Here, we present a new database of N input from a survey of 6611 small-scale rice farmers and rice yield in response to added N in 1177 experimental on-farm tests across eight agroecological subregions of China. This database enables us to evaluate N management by farmers and develop an optimal approach to regional N management. We also investigated grain yield, N application rate, and estimated greenhouse gas (GHG) emissions in comparison to N application and farming practices. Across all farmers, the average N application rate, weighted by the area of rice production in each subregion, was 210 kg ha −1 and ranged from 30 to 744 kg ha −1 across fields and from 131 to 316 kg ha −1 across regions. The regionally optimal N rate (RONR) determined from the experiments averaged 167 kg ha −1 and varied from 114 to 224 kg N ha −1 for the different regions. If these RONR were widely adopted in China, approximately 56% of farms would reduce their use of N fertilizer, and approximately 33% would increase their use of N fertilizer. As a result, grain yield would increase by 7.4% from 7.14 to 7.67 Mg ha −1 , and the estimated GHG emissions would be reduced by 11.1% from 1390 to 1236 kg carbon dioxide (CO 2 ) eq Mg −1 grain. These results suggest that to achieve the goals of improvement in regional yield and sustainable environmental development, regional N use should be optimized among N-poor and N-rich farms and regions in China. (letter)

  5. Influence of irradiated chitosan on rice plants growing in hydroponic medium contaminated with salt and heavy metals

    International Nuclear Information System (INIS)

    Lam, N.D.; Diep, T.B.; Kume, Tamikazu

    2000-01-01

    Effect of chitosan and radiation-degraded chitosan on rice seedlings of a Vietnam's original variety was investigated. Potential of irradiated chitosan in plant tolerance for several stress factors (salt, zinc, and vanadium) also was studied as well. Chitosan represented in hydroponic medium clearly inhibited the growth of rice seedlings at concentrations arranging from 50 ppm. Radiation processing of chitosan with dose higher than 100 kGy reduced toxicity of chitosan and the efficacy was of dose proportion. Rice plant of 203 origin was almost normally grown in hydroponic solution containing chitosan that has been irradiated with dose of 150 and 200 kGy. Irradiated chitosan increased plant resistance to environmental stress caused by vanadium (V); thereby the seedlings could be recovered completely, even gained in biomass. This effect was not appeared when applied chitosan to rice in media contaminated by zinc (Zn) and salt (NaCl). The selectness of irradiated chitosan on various stress factors partly clarified the assistant action of chitosan in the vanadium intoxication because chelating with metal ions could not be evaluated as main mechanism. (author)

  6. Automatic segmentation of MRI head images by 3-D region growing method which utilizes edge information

    International Nuclear Information System (INIS)

    Jiang, Hao; Suzuki, Hidetomo; Toriwaki, Jun-ichiro

    1991-01-01

    This paper presents a 3-D segmentation method that automatically extracts soft tissue from multi-sliced MRI head images. MRI produces a sequence of two-dimensional (2-D) images which contains three-dimensional (3-D) information of organs. To utilize such information we need effective algorithms to treat 3-D digital images and to extract organs and tissues of interest. We developed a method to extract the brain from MRI images which uses a region growing procedure and integrates information of uniformity of gray levels and information of the presence of edge segments in the local area around the pixel of interest. First we generate a kernel region which is a part of brain tissue by simple thresholding. Then we grow the region by means of a region growing algorithm under the control of 3-D edge existence to obtain the region of the brain. Our method is rather simple because it uses basic 3-D image processing techniques like spatial difference. It is robust for variation of gray levels inside a tissue since it also refers to the edge information in the process of region growing. Therefore, the method is flexible enough to be applicable to the segmentation of other images including soft tissues which have complicated shapes and fluctuation in gray levels. (author)

  7. A comparative study of competitiveness between different genotypes of weedy rice (Oryza sativa) and cultivated rice.

    Science.gov (United States)

    Dai, Lei; Dai, Weimin; Song, Xiaoling; Lu, Baorong; Qiang, Sheng

    2014-01-01

    Competition from weedy rice can cause serious yield losses to cultivated rice. However, key traits that facilitate competitiveness are still not well understood. To explore the mechanisms behind the strong growth and competitive ability, replacement series experiments were established with six genotypes of weedy rice from different regions and one cultivated rice cultivar. (1) Weedy rice from southern China had the greatest impact on growth and yield of cultivated rice throughout the entire growing season. Weedy rice from the northeast was very competitive during the early vegetative stage while the competitive effects of eastern weedy rice were more detrimental at later crop-growth stages. (2) As the proportion of weedy rice increased, plant height, tillers, above-ground biomass, and yield of cultivated rice significantly declined; the crop always being at disadvantage regardless of proportion. (3) Weedy biotypes with greater diversity as estimated by their Shannon indexes were more detrimental to the growth and yield of cultivated rice. Geographic origin (latitude) of weedy rice biotype, its mixture proportion under competition with the crop and its genetic diversity are determinant factors of the outcome of competition and the associated decline in the rice crop yield. © 2013 Society of Chemical Industry. © 2013 Society of Chemical Industry.

  8. Trace gas fluxes from intensively managed rice and soybean fields across three growing seasons in the Brazilian Amazon

    Science.gov (United States)

    R.C. Oliveira Junior; Michael Keller; P. Crill; T. Beldini; J. Van Haren; P. Camargo

    2015-01-01

    The emission of gases that may potentially intensify the greenhouse effect has received special attention due to their ability to raise global temperatures and possibly modify conditions for life on earth. The objectives of this study were the quantification of trace gas flux (N2O, CO2 and CH4) in soils of the lower Amazon basin that are planted with rice and soybean,...

  9. Conceptual Architecture and Service-Oriented Implementation of a Regional Geoportal for Rice Monitoring

    Directory of Open Access Journals (Sweden)

    Carlos Granell

    2017-06-01

    Full Text Available Agricultural monitoring has greatly benefited from the increased availability of a wide variety of remote-sensed satellite imagery, ground-sensed data (e.g., weather station networks and crop models, delivering a wealth of actionable information to stakeholders to better streamline and improve agricultural practices. Nevertheless, as the degree of sophistication of agriculture monitoring systems increases, significant challenges arise due to the handling and integration of multi-scale data sources to present information to decision-makers in a way which is useful, understandable and user friendly. To address these issues, in this article we present the conceptual architecture and service-oriented implementation of a regional geoportal, specifically focused on rice crop monitoring in order to perform unified monitoring with a supporting system at regional scale. It is capable of storing, processing, managing, serving and visualizing monitoring and generated data products with different granularity and originating from different data sources. Specifically, we focus on data sources and data flow, and their importance for and in relation to different stakeholders. In the context of an EU-funded research project, we present an implementation of the regional geoportal for rice monitoring, which is currently in use in Europe’s three largest rice-producing countries, Italy, Greece and Spain.

  10. In Situ Biodiesel Production from Fast-Growing and High Oil Content Chlorella pyrenoidosa in Rice Straw Hydrolysate

    Science.gov (United States)

    Li, Penglin; Miao, Xiaoling; Li, Rongxiu; Zhong, Jianjiang

    2011-01-01

    Rice straw hydrolysate was used as lignocellulose-based carbon source for Chlorella pyrenoidosa cultivation and the feasibility of in situ biodiesel production was investigated. 13.7 g/L sugar was obtained by enzymatic hydrolyzation of rice straw. Chlorella pyrenoidosa showed a rapid growth in the rice straw hydrolysate medium, the maximum biomass concentration of 2.83 g/L was obtained in only 48 hours. The lipid content of the cells reached as high as 56.3%. In situ transesterification was performed for biodiesel production. The optimized condition was 1 g algal powder, 6 mL n-hexane, and 4 mL methanol with 0.5 M sulfuric acid at the temperature of 90°C in 2-hour reaction time, under which over 99% methyl ester content and about 95% biodiesel yield were obtained. The results suggested that the method has great potential in the production of biofuels with lignocellulose as an alternative carbon source for microalgae cultivation. PMID:21318171

  11. The terroir of vineyards - climatic variability in an Austrian wine-growing region

    Science.gov (United States)

    Gerersdorfer, T.

    2010-09-01

    The description of a terroir is a concept in viticulture that relates the sensory attributes of wine to the environmental conditions in which the grapes grow. Many factors are involved including climate, soil, cultivar, human practices and all these factors interact manifold. The study area of Carnuntum is a small wine-growing region in the eastern part of Austria. It is rich of Roman remains which play a major role in tourism and the marketing strategies of the wines as well. An interdisciplinary study on the environmental characteristics particularly with regard to growing conditions of grapes was started in this region. The study is concerned with the description of the physiogeographic properties of the region and with the investigation of the dominating viticultural functions. Grape-vines depend on climatic conditions to a high extent. Compared to other influencing factors like soil, climate plays a significant role. In the framework of this interdisciplinary project climatic variability within the Carnuntum wine-growing region is investigated. On the one hand microclimatic variations are influenced by soil type and by canopy management. On the other hand the variability is a result of the topoclimate (altitude, aspect and slope) and therefore relief is a major terroir factor. Results of microclimatic measurements and variations are presented with focus on the interpretation of the relationship between relief, structure of the vineyards and the climatic conditions within the course of a full year period.

  12. Mapping paddy rice planting area in rice-wetland coexistent areas through analysis of Landsat 8 OLI and MODIS images.

    Science.gov (United States)

    Zhou, Yuting; Xiao, Xiangming; Qin, Yuanwei; Dong, Jinwei; Zhang, Geli; Kou, Weili; Jin, Cui; Wang, Jie; Li, Xiangping

    2016-04-01

    Accurate and up-to-date information on the spatial distribution of paddy rice fields is necessary for the studies of trace gas emissions, water source management, and food security. The phenology-based paddy rice mapping algorithm, which identifies the unique flooding stage of paddy rice, has been widely used. However, identification and mapping of paddy rice in rice-wetland coexistent areas is still a challenging task. In this study, we found that the flooding/transplanting periods of paddy rice and natural wetlands were different. The natural wetlands flood earlier and have a shorter duration than paddy rice in the Panjin Plain, a temperate region in China. We used this asynchronous flooding stage to extract the paddy rice planting area from the rice-wetland coexistent area. MODIS Land Surface Temperature (LST) data was used to derive the temperature-defined plant growing season. Landsat 8 OLI imagery was used to detect the flooding signal and then paddy rice was extracted using the difference in flooding stages between paddy rice and natural wetlands. The resultant paddy rice map was evaluated with in-situ ground-truth data and Google Earth images. The estimated overall accuracy and Kappa coefficient were 95% and 0.90, respectively. The spatial pattern of OLI-derived paddy rice map agrees well with the paddy rice layer from the National Land Cover Dataset from 2010 (NLCD-2010). The differences between Rice Landsat and Rice NLCD are in the range of ±20% for most 1-km grid cell. The results of this study demonstrate the potential of the phenology-based paddy rice mapping algorithm, via integrating MODIS and Landsat 8 OLI images, to map paddy rice fields in complex landscapes of paddy rice and natural wetland in the temperate region.

  13. Landscape planning for agridevelopment at regional scale: an example from cotton growing Yavatmal district, Maharashtra, India

    Directory of Open Access Journals (Sweden)

    Bhaskara Phaneendra Bhaskar

    2015-12-01

    Full Text Available The basaltic landscape planning on the hot semiarid ecosystem in cotton growing Yavatmal district, Maharashtra tends to concentrate on 52 per cent of total cultivated area with 43 per cent of rural families living below poverty line posing major problem for environmental protection and resource management. Concepts of sustainable development at regional-level planning suggested that there is a growing concern for the landscape community to develop a strategic regional agricultural planning perspective in order to assist landscape planning goals. These challenges were explored with particular reference to the cotton growing Yavatmal district in Maharashtra through baseline land resource / agronomic surveys and assessing the production potential of regional rural landscapes for crop planning. Landscape analysis, premised on the geopedological and elevation constructs, culminated in a spatial coverage of hills and ridges (12.6 per cent of total area in northern and central parts whereas plateaus (29.3 per cent in association with isolated hills, mesas and butte and escarpments (17.7 per cent, pediplains (28.8 per cent and plains (8.1 per cent in south western parts of the district. Regional level analysis revealed spatially variable soil typologies dominated by vertisols and vertic intergrades. An exploration and brief account of integration landscape planning was discussed with some reflections on the experience and highlighting some of the problems and potentials of this approach within the regional context.

  14. A Study on the Application of Fuzzy Information Seeded Region Growing in Brain MRI Tissue Segmentation

    Directory of Open Access Journals (Sweden)

    Chuin-Mu Wang

    2014-01-01

    Full Text Available After long-term clinical trials, MRI has been proven to be used in humans harmlessly, and it is popularly used in medical diagnosis. Although MR is highly sensitive, it provides abundant organization information. Therefore, how to transform the multi-spectral images which is easier to be used for doctor’s clinical diagnosis. In this thesis, the fuzzy bidirectional edge detection method is used to solve conventional SRG problem of growing order in the initial seed stages. In order to overcome the problems of the different regions, although it is the same Euclidean distance for region growing and merging process stages, we present the peak detection method to improve them. The standard deviation target generation process (SDTGP is applied to guarantee the regions merging process does not cause over- or undersegmentation. Experimental results reveal that FISRG segments a multispectral MR image much more effectively than FAST and K-means.

  15. Levels and patterns of nucleotide variation in domestication QTL regions on rice chromosome 3 suggest lineage-specific selection.

    Directory of Open Access Journals (Sweden)

    Xianfa Xie

    Full Text Available Oryza sativa or Asian cultivated rice is one of the major cereal grass species domesticated for human food use during the Neolithic. Domestication of this species from the wild grass Oryza rufipogon was accompanied by changes in several traits, including seed shattering, percent seed set, tillering, grain weight, and flowering time. Quantitative trait locus (QTL mapping has identified three genomic regions in chromosome 3 that appear to be associated with these traits. We would like to study whether these regions show signatures of selection and whether the same genetic basis underlies the domestication of different rice varieties. Fragments of 88 genes spanning these three genomic regions were sequenced from multiple accessions of two major varietal groups in O. sativa--indica and tropical japonica--as well as the ancestral wild rice species O. rufipogon. In tropical japonica, the levels of nucleotide variation in these three QTL regions are significantly lower compared to genome-wide levels, and coalescent simulations based on a complex demographic model of rice domestication indicate that these patterns are consistent with selection. In contrast, there is no significant reduction in nucleotide diversity in the homologous regions in indica rice. These results suggest that there are differences in the genetic and selective basis for domestication between these two Asian rice varietal groups.

  16. Rice herbicide monitoring in two Brazilian rivers during the rice growing season Monitoramento de herbicidas em dois rios brasileiros durante o período de cultivo do arroz

    Directory of Open Access Journals (Sweden)

    Enio Marchesan

    2007-01-01

    Full Text Available Irrigated rice production can involve environmental contamination with pesticides due to the proximity of the fields to rivers and to management problems. During three years (2000 to 2003 the rice herbicides clomazone, propanil and quinclorac were quantified in water during the rice growing season, in the Vacacaí and Vacacaí-Mirim Rivers, located in Rio Grande do Sul (RS State, Brazil. Water samples were taken at several locations in each river, selected by their importance in terms of rice drainage area. The samples were analyzed by HPLC-UV. At least one herbicide was detected in 41% of the samples from the Vacacaí River and 33% from the Vacacaí-Mirim River. The most frequent herbicide in both rivers and in each year was clomazone. The amount of herbicides in the river water was dependent on the rainfall regime. River water contamination by rice herbicides is probably caused by the rice water management used in the fields. The maintenance of flooded areas makes herbicides prone to contaminate the environment. To reduce the environmental contamination risk it is necessary to adopt measures to avoid overflow of flooded rice fields, keeping paddy water in the field for time enough to reduce the herbicide concentration before its release and enhancing the quality of the levees to reduce the probability of paddy rice overflow.No cultivo de arroz irrigado a possibilidade de contaminação dos mananciais hídricos é ampliada pelas características peculiares das áreas e do sistema de produção. Um estudo de monitoramento foi conduzido durante três anos (2000 a 2003, nos rios Vacacaí e Vacacaí-Mirim, localizados no Estado do Rio Grande do Sul, Brasil, buscando quantificar os herbicidas clomazone, propanil e quinclorac durante o período de cultivo do arroz. As amostras de água foram coletadas em vários locais em cada rio. Os locais de coleta foram selecionados pela importância em termos da captação da água de drenagem. As amostras foram

  17. Automated Segmentation of Coronary Arteries Based on Statistical Region Growing and Heuristic Decision Method

    Directory of Open Access Journals (Sweden)

    Yun Tian

    2016-01-01

    Full Text Available The segmentation of coronary arteries is a vital process that helps cardiovascular radiologists detect and quantify stenosis. In this paper, we propose a fully automated coronary artery segmentation from cardiac data volume. The method is built on a statistics region growing together with a heuristic decision. First, the heart region is extracted using a multi-atlas-based approach. Second, the vessel structures are enhanced via a 3D multiscale line filter. Next, seed points are detected automatically through a threshold preprocessing and a subsequent morphological operation. Based on the set of detected seed points, a statistics-based region growing is applied. Finally, results are obtained by setting conservative parameters. A heuristic decision method is then used to obtain the desired result automatically because parameters in region growing vary in different patients, and the segmentation requires full automation. The experiments are carried out on a dataset that includes eight-patient multivendor cardiac computed tomography angiography (CTA volume data. The DICE similarity index, mean distance, and Hausdorff distance metrics are employed to compare the proposed algorithm with two state-of-the-art methods. Experimental results indicate that the proposed algorithm is capable of performing complete, robust, and accurate extraction of coronary arteries.

  18. White rice consumption and risk of esophageal cancer in Xinjiang Uyghur Autonomous Region, northwest China: a case-control study

    OpenAIRE

    Tang, Li; Xu, Fenglian; Zhang, Taotao; Lei, Jun; Binns, Colin W.; Lee, Andy H.

    2015-01-01

    This study investigated the association between white rice consumption and the risk of esophageal cancer in remote northwest China, where the cancer incidence is known to be high. A case-control study was conducted during 2008?2009 in Urumqi and Shihezi, Xinjiang Uyghur Autonomous Region of China. Participants were 359 incident esophageal cancer patients and 380 hospital-based controls. Information on habitual white rice consumption was obtained by personal interview using a validated semi-qu...

  19. Rice in cropping systems - Modelling transitions between flooded and non-flooded soil environments

    NARCIS (Netherlands)

    Gaydon, D.S.; Probert, M.E.; Buresh, R.J.; Meinke, H.B.; Suriadi, A.; Dobermann, A.; Bouman, B.A.M.; Timsina, J.

    2012-01-01

    Water shortages in many rice-growing regions, combined with growing global imperatives to increase food production, are driving research into increased water use efficiency and modified agricultural practices in rice-based cropping systems. Well-tested cropping systems models that capture

  20. Segmentation of Large Unstructured Point Clouds Using Octree-Based Region Growing and Conditional Random Fields

    Science.gov (United States)

    Bassier, M.; Bonduel, M.; Van Genechten, B.; Vergauwen, M.

    2017-11-01

    Point cloud segmentation is a crucial step in scene understanding and interpretation. The goal is to decompose the initial data into sets of workable clusters with similar properties. Additionally, it is a key aspect in the automated procedure from point cloud data to BIM. Current approaches typically only segment a single type of primitive such as planes or cylinders. Also, current algorithms suffer from oversegmenting the data and are often sensor or scene dependent. In this work, a method is presented to automatically segment large unstructured point clouds of buildings. More specifically, the segmentation is formulated as a graph optimisation problem. First, the data is oversegmented with a greedy octree-based region growing method. The growing is conditioned on the segmentation of planes as well as smooth surfaces. Next, the candidate clusters are represented by a Conditional Random Field after which the most likely configuration of candidate clusters is computed given a set of local and contextual features. The experiments prove that the used method is a fast and reliable framework for unstructured point cloud segmentation. Processing speeds up to 40,000 points per second are recorded for the region growing. Additionally, the recall and precision of the graph clustering is approximately 80%. Overall, nearly 22% of oversegmentation is reduced by clustering the data. These clusters will be classified and used as a basis for the reconstruction of BIM models.

  1. Genetic relatedness among indigenous rice varieties in the Eastern Himalayan region based on nucleotide sequences of the Waxy gene.

    Science.gov (United States)

    Choudhury, Baharul I; Khan, Mohammed L; Dayanandan, Selvadurai

    2014-12-29

    Indigenous rice varieties in the Eastern Himalayan region of Northeast India are traditionally classified into sali, boro and jum ecotypes based on geographical locality and the season of cultivation. In this study, we used DNA sequence data from the Waxy (Wx) gene to infer the genetic relatedness among indigenous rice varieties in Northeast India and to assess the genetic distinctiveness of ecotypes. The results of all three analyses (Bayesian, Maximum Parsimony and Neighbor Joining) were congruent and revealed two genetically distinct clusters of rice varieties in the region. The large group comprised several varieties of sali and boro ecotypes, and all agronomically improved varieties. The small group consisted of only traditionally cultivated indigenous rice varieties, which included one boro, few sali and all jum varieties. The fixation index analysis revealed a very low level of differentiation between sali and boro (F(ST) = 0.005), moderate differentiation between sali and jum (F(ST) = 0.108) and high differentiation between jum and boro (F(ST) = 0.230) ecotypes. The genetic relatedness analyses revealed that sali, boro and jum ecotypes are genetically heterogeneous, and the current classification based on cultivation type is not congruent with the genetic background of rice varieties. Indigenous rice varieties chosen from genetically distinct clusters could be used in breeding programs to improve genetic gain through heterosis, while maintaining high genetic diversity.

  2. Nucleus and cytoplasm segmentation in microscopic images using K-means clustering and region growing.

    Science.gov (United States)

    Sarrafzadeh, Omid; Dehnavi, Alireza Mehri

    2015-01-01

    Segmentation of leukocytes acts as the foundation for all automated image-based hematological disease recognition systems. Most of the time, hematologists are interested in evaluation of white blood cells only. Digital image processing techniques can help them in their analysis and diagnosis. The main objective of this paper is to detect leukocytes from a blood smear microscopic image and segment them into their two dominant elements, nucleus and cytoplasm. The segmentation is conducted using two stages of applying K-means clustering. First, the nuclei are segmented using K-means clustering. Then, a proposed method based on region growing is applied to separate the connected nuclei. Next, the nuclei are subtracted from the original image. Finally, the cytoplasm is segmented using the second stage of K-means clustering. The results indicate that the proposed method is able to extract the nucleus and cytoplasm regions accurately and works well even though there is no significant contrast between the components in the image. In this paper, a method based on K-means clustering and region growing is proposed in order to detect leukocytes from a blood smear microscopic image and segment its components, the nucleus and the cytoplasm. As region growing step of the algorithm relies on the information of edges, it will not able to separate the connected nuclei more accurately in poor edges and it requires at least a weak edge to exist between the nuclei. The nucleus and cytoplasm segments of a leukocyte can be used for feature extraction and classification which leads to automated leukemia detection.

  3. Effect of different N fertilizer forms on antioxidant capacity and grain yield of rice growing under Cd stress

    International Nuclear Information System (INIS)

    Jalloh, Mohamed Alpha; Chen Jinghong; Zhen Fanrong; Zhang Guoping

    2009-01-01

    Cadmium contamination in soil has become a serious issue in sustainable agriculture production and food safety. A pot experiment was conducted to study the influence of four N fertilizer forms on grain yield, Cd concentration in plant tissues and oxidative stress under two Cd levels (0 and 100 mg Cd kg -1 soil). The results showed that both N form and Cd stress affected grain yield, with urea-N and NH 4 + -N treatments having significantly higher grain yields, and Cd addition reducing yield. NO 3 - -N and NH 4 + -N treated plants had the highest and lowest Cd concentration in plant tissues, respectively. Urea-N and NH 4 + -N treatments had significantly higher N accumulation in plant tissues than other two N treatments. Cd addition caused a significant increase in leaf superoxide dismutase (SOD) and peroxidase (POD) activities for all N treatments, except for NO 3 - -N treatment, with urea-N and NH 4 + -N treated plants having more increase than organic-N treated ones. The results indicated that growth inhibition, yield reduction and Cd uptake of rice plants in response to Cd addition varied with the N fertilizer form

  4. Effect of different N fertilizer forms on antioxidant capacity and grain yield of rice growing under Cd stress.

    Science.gov (United States)

    Jalloh, Mohamed Alpha; Chen, Jinghong; Zhen, Fanrong; Zhang, Guoping

    2009-03-15

    Cadmium contamination in soil has become a serious issue in sustainable agriculture production and food safety. A pot experiment was conducted to study the influence of four N fertilizer forms on grain yield, Cd concentration in plant tissues and oxidative stress under two Cd levels (0 and 100 mg Cd kg(-1)soil). The results showed that both N form and Cd stress affected grain yield, with urea-N and NH(4)(+)-N treatments having significantly higher grain yields, and Cd addition reducing yield. NO(3)(-)-N and NH(4)(+)-N treated plants had the highest and lowest Cd concentration in plant tissues, respectively. Urea-N and NH(4)(+)-N treatments had significantly higher N accumulation in plant tissues than other two N treatments. Cd addition caused a significant increase in leaf superoxide dismutase (SOD) and peroxidase (POD) activities for all N treatments, except for NO(3)(-)-N treatment, with urea-N and NH(4)(+)-N treated plants having more increase than organic-N treated ones. The results indicated that growth inhibition, yield reduction and Cd uptake of rice plants in response to Cd addition varied with the N fertilizer form.

  5. Effect of different N fertilizer forms on antioxidant capacity and grain yield of rice growing under Cd stress

    Energy Technology Data Exchange (ETDEWEB)

    Jalloh, Mohamed Alpha; Chen Jinghong; Zhen Fanrong [Department of Agronomy, Huajiachi Campus, Zhejiang University, Hangzhou 310029 (China); Zhang Guoping [Department of Agronomy, Huajiachi Campus, Zhejiang University, Hangzhou 310029 (China)], E-mail: zhanggp@zju.edu.cn

    2009-03-15

    Cadmium contamination in soil has become a serious issue in sustainable agriculture production and food safety. A pot experiment was conducted to study the influence of four N fertilizer forms on grain yield, Cd concentration in plant tissues and oxidative stress under two Cd levels (0 and 100 mg Cd kg{sup -1} soil). The results showed that both N form and Cd stress affected grain yield, with urea-N and NH{sub 4}{sup +}-N treatments having significantly higher grain yields, and Cd addition reducing yield. NO{sub 3}{sup -}-N and NH{sub 4}{sup +}-N treated plants had the highest and lowest Cd concentration in plant tissues, respectively. Urea-N and NH{sub 4}{sup +}-N treatments had significantly higher N accumulation in plant tissues than other two N treatments. Cd addition caused a significant increase in leaf superoxide dismutase (SOD) and peroxidase (POD) activities for all N treatments, except for NO{sub 3}{sup -}-N treatment, with urea-N and NH{sub 4}{sup +}-N treated plants having more increase than organic-N treated ones. The results indicated that growth inhibition, yield reduction and Cd uptake of rice plants in response to Cd addition varied with the N fertilizer form.

  6. The Sabethines of Northern Andean Coffee-Growing Regions of Colombia.

    Science.gov (United States)

    Suaza-Vasco, Juan; López-Rubio, Andrés; Galeano, Juan; Uribe, Sandra; Vélez, Iván; Porter, Charles

    2015-06-01

    Sampling for sabethine mosquitoes occurred intermittently from September 2007 to April 2013 in 17 municipalities, located in 5 departments (divisions) in the northern Andean coffee-growing regions of Colombia. Of the 9 genera within the Sabethini tribe known to occur in the Neotropical region, 6 were encountered including 15 species: Jonhbelkinia ulopus, Limatus durhamii, Sabethes ignotus, Sa. luxodens, Sa. undosus, Shannoniana fluviatilis, Trichoprosopon compressum, Tr. digitatum, Tr. evansae, Tr. pallidiventer s.l., Tr. pallidiventer s.s., Wyeomyia arthrostigma, Wy. oblita, Wy. ulocoma, and Wy. undulata. The species Sa. luxodens and Wy. undulata constitute new records for Colombia. These records broaden the knowledge of this important group that includes some important species related to the arbovirus transmission. Records are from the northern Colombian Andes, a region noted for coffee cultivation and ecotourism.

  7. Segmentation of Extrapulmonary Tuberculosis Infection Using Modified Automatic Seeded Region Growing

    Directory of Open Access Journals (Sweden)

    Nordin Abdul

    2009-01-01

    Full Text Available Abstract In the image segmentation process of positron emission tomography combined with computed tomography (PET/CT imaging, previous works used information in CT only for segmenting the image without utilizing the information that can be provided by PET. This paper proposes to utilize the hot spot values in PET to guide the segmentation in CT, in automatic image segmentation using seeded region growing (SRG technique. This automatic segmentation routine can be used as part of automatic diagnostic tools. In addition to the original initial seed selection using hot spot values in PET, this paper also introduces a new SRG growing criterion, the sliding windows. Fourteen images of patients having extrapulmonary tuberculosis have been examined using the above-mentioned method. To evaluate the performance of the modified SRG, three fidelity criteria are measured: percentage of under-segmentation area, percentage of over-segmentation area, and average time consumption. In terms of the under-segmentation percentage, SRG with average of the region growing criterion shows the least error percentage (51.85%. Meanwhile, SRG with local averaging and variance yielded the best results (2.67% for the over-segmentation percentage. In terms of the time complexity, the modified SRG with local averaging and variance growing criterion shows the best performance with 5.273 s average execution time. The results indicate that the proposed methods yield fairly good performance in terms of the over- and under-segmentation area. The results also demonstrated that the hot spot values in PET can be used to guide the automatic segmentation in CT image.

  8. Segmentasi Pembuluh Darah Retina Pada Citra Fundus Menggunakan Gradient Based Adaptive Thresholding Dan Region Growing

    Directory of Open Access Journals (Sweden)

    Deni Sutaji

    2016-07-01

    Full Text Available AbstrakSegmentasi pembuluh darah pada citra fundus retina menjadi hal yang substansial dalam dunia kedokteran, karena dapat digunakan untuk mendeteksi penyakit, seperti: diabetic retinopathy, hypertension, dan cardiovascular. Dokter membutuhkan waktu sekitar dua jam untuk mendeteksi pembuluh darah retina, sehingga diperlukan metode yang dapat membantu screening agar lebih cepat.Penelitian sebelumnya mampu melakukan segmentasi pembuluh darah yang sensitif terhadap variasi ukuran lebar pembuluh darah namun masih terjadi over-segmentasi pada area patologi. Oleh karena itu, penelitian ini bertujuan untuk mengembangkan metode segmentasi pembuluh darah pada citra fundus retina yang dapat mengurangi over-segmentasi pada area patologi menggunakan Gradient Based Adaptive Thresholding dan Region Growing.Metode yang diusulkan terdiri dari 3 tahap, yaitu segmentasi pembuluh darah utama, deteksi area patologi dan segmentasi pembuluh darah tipis. Tahap segmentasi pembuluh darah utama menggunakan high-pass filtering dan tophat reconstruction pada kanal hijau citra yang sudah diperbaiki kontrasnya sehingga lebih jelas perbedaan antara pembuluh darah dan background. Tahap deteksi area patologi menggunakan metode Gradient Based Adaptive Thresholding. Tahap segmentasi pembuluh darah tipis menggunakan Region Growing berdasarkan informasi label pembuluh darah utama dan label area patologi. Hasil segmentasi pembuluh darah utama dan pembuluh darah tipis kemudian digabungkan sehingga menjadi keluaran sistem berupa citra biner pembuluh darah. Berdasarkan hasil uji coba, metode ini mampu melakukan segmentasi pembuluh darah retina dengan baik pada citra fundus DRIVE, yaitu dengan akurasi rata-rata 95.25% dan nilai Area Under Curve (AUC pada kurva Relative Operating Characteristic (ROC sebesar 74.28%.                           Kata Kunci: citra fundus retina, gradient based adaptive thresholding, patologi, pembuluh darah retina, region growing

  9. Abundance and distribution of microplastics within surface sediments of a key shellfish growing region of Canada.

    Science.gov (United States)

    Kazmiruk, T N; Kazmiruk, V D; Bendell, L I

    2018-01-01

    The abundance and distribution of microplastics within 5 sediment size classes (>5000 μm, 1000-5000 μm, 250-1000 μm, 250-0.63 μm and Microplastics were found at all sampling locations indicating widespread contamination of this region with these particles. Three types of microplastics were recovered: microbeads, which occurred in the greatest number (up to 25000/kg dry sediment) and microfibers and microfragments, which were much less in number compared with microbeads and occurred in similar amounts (100-300/kg dry sediment). Microbeads were recovered primarily in the microplastics were spatially dependent with principal component analysis (PCA) indicating that 84 percent of the variation in abundance and distribution was due to the presence of high numbers of microbeads at three locations within the study region. At these sites, microbeads expressed as a percent component of the sediment by weight was similar to key geochemical components that govern trace metal behavior and availability to benthic organisms. Microbeads have been shown to accumulate metals from the aquatic environment, hence in addition to the traditional geochemical components such as silt and organic matter, microplastics also need to be considered as a sediment component that can influence trace metal geochemistry. Our findings have shown that BC's premier oyster growing region is highly contaminated with microplastics, notably microbeads. It would be prudent to assess the degree to which oysters from this region are ingesting microplastics. If so, it would have direct implications for Canada's oyster farming industry with respect to the health of the oyster and the quality of product that is being farmed and sets an example for other shellfish growing regions of the world.

  10. Prevalence and effect of schistosome and soil-transmitted helminth infection on labour input in rice-growing communities of Ogun State, Nigeria

    Directory of Open Access Journals (Sweden)

    Sammy Olufemi Sam-Wobo

    2013-06-01

    Full Text Available Schistosomiasis and soil-transmitted helminthiasis (STH are public health problems in communities which lack basic social amenities with poor hygienic conditions. Studies were carried out to determine the prevalence and effect of schistosomes and soil-transmitted helminths infection on labour input on rice production in 9 rice-growing communities of Ogun State. Parasitological examinations of urine and faecal samples, and structured questionnaires were conducted on 243 consented individuals from May 2009 to March 2010. The results showed an overall prevalence of 17% for Ascaris lumbricoides, 12% for hookworms, 2% for Trichuris trichiura, 1% for Schistosoma haematobium and 1% for Schistosoma mansoni. A. lumbricoides and hookworms were more prevalent in Agbajege (25%, and varied in the other 8 communities. T. trichiura was prevalent in three communities, Agbajege (5%, Akodu (4.2%, and Moloko-Asipa (4.8 %; S. haematobium was prevalent only in Ayedere (2.6% and Lufoko (8%, while S. mansoni was prevalent only in Moloko-Asipa (9.5%. Infections among the gender were varied as 26.3 % of males and 33.8 % of females had an overall prevalence of: A. lumbricoides (16.8%, hookworms (11.8%, T. trichiura (1.6%, S. haematobium (1.1% and S. mansoni (1.1%. On frequency of infection to incapacitation per year, 45% of respondents were incapacitated 1-2 times, 27% 3-4 times and 19% were incapacitated more than 4 times. Understanding the effect of these two diseases will not only improve the health status of residents but also increase their productivity and ensure food security.

  11. Forecasting municipal solid waste generation in a fast-growing urban region with system dynamics modeling

    International Nuclear Information System (INIS)

    Dyson, Brian; Chang, N.-B.

    2005-01-01

    Both planning and design of municipal solid waste management systems require accurate prediction of solid waste generation. Yet achieving the anticipated prediction accuracy with regard to the generation trends facing many fast-growing regions is quite challenging. The lack of complete historical records of solid waste quantity and quality due to insufficient budget and unavailable management capacity has resulted in a situation that makes the long-term system planning and/or short-term expansion programs intangible. To effectively handle these problems based on limited data samples, a new analytical approach capable of addressing socioeconomic and environmental situations must be developed and applied for fulfilling the prediction analysis of solid waste generation with reasonable accuracy. This study presents a new approach - system dynamics modeling - for the prediction of solid waste generation in a fast-growing urban area based on a set of limited samples. To address the impact on sustainable development city wide, the practical implementation was assessed by a case study in the city of San Antonio, Texas (USA). This area is becoming one of the fastest-growing regions in North America due to the economic impact of the North American Free Trade Agreement (NAFTA). The analysis presents various trends of solid waste generation associated with five different solid waste generation models using a system dynamics simulation tool - Stella[reg]. Research findings clearly indicate that such a new forecasting approach may cover a variety of possible causative models and track inevitable uncertainties down when traditional statistical least-squares regression methods are unable to handle such issues

  12. CAMSHIFT IMPROVEMENT WITH MEAN-SHIFT SEGMENTATION, REGION GROWING, AND SURF METHOD

    Directory of Open Access Journals (Sweden)

    Ferdinan Ferdinan

    2013-10-01

    Full Text Available CAMSHIFT algorithm has been widely used in object tracking. CAMSHIFT utilizescolor features as the model object. Thus, original CAMSHIFT may fail when the object color issimilar with the background color. In this study, we propose CAMSHIFT tracker combined withmean-shift segmentation, region growing, and SURF in order to improve the tracking accuracy.The mean-shift segmentation and region growing are applied in object localization phase to extractthe important parts of the object. Hue-distance, saturation, and value are used to calculate theBhattacharyya distance to judge whether the tracked object is lost. Once the object is judged lost,SURF is used to find the lost object, and CAMSHIFT can retrack the object. The Object trackingsystem is built with OpenCV. Some measurements of accuracy have done using frame-basedmetrics. We use datasets BoBoT (Bonn Benchmark on Tracking to measure accuracy of thesystem. The results demonstrate that CAMSHIFT combined with mean-shift segmentation, regiongrowing, and SURF method has higher accuracy than the previous methods.

  13. Integrating multiscale polar active contours and region growing for microcalcifications segmentation in mammography

    International Nuclear Information System (INIS)

    Arikidis, N S; Karahaliou, A; Skiadopoulos, S; Panagiotakis, G; Costaridou, L; Likaki, E

    2009-01-01

    Morphology of individual microcalcifications is an important clinical factor in microcalcification clusters diagnosis. Accurate segmentation remains a difficult task due to microcalcifications small size, low contrast, fuzzy nature and low distinguishability from surrounding tissue. A novel application of active rays (polar transformed active contours) on B-spline wavelet representation is employed, to provide initial estimates of microcalcification boundary. Then, a region growing method is used with pixel aggregation constrained by the microcalcification boundary estimates, to obtain the final microcalcification boundary. The method was tested on dataset of 49 microcalcification clusters (30 benign, 19 malignant), originating from the DDSM database. An observer study was conducted to evaluate segmentation accuracy of the proposed method, on a 5-point rating scale (from 5:excellent to 1:very poor). The average accuracy rating was 3.98±0.81 when multiscale active rays were combined to region growing and 2.93±0.92 when combined to linear polynomial fitting, while the difference in rating of segmentation accuracy was statistically significant (p < 0.05).

  14. ADAPTIVE CAPACITIES OF FARMERS TO CLIMATE CHANGE ADAPTATION STRATEGIES AND THEIR EFFECTS ON RICE PRODUCTION IN THE NORTHERN REGION OF GHANA

    Directory of Open Access Journals (Sweden)

    Franklin Nantui Mabe

    2012-11-01

    Full Text Available This study estimated the adaptive capacities of farmers to climate change adaptation strategies and their effects on rice production in the Northern Region of Ghana. The adaptive capacities of rice farmers were estimated quantitatively and categorized into high, moderate and low adaptive capacities. Double logarithmic regression model of Cobb-Douglas production function was used to quantity the effects of adaptive capacities of farmers on rice production. On the average, the farmers interviewed are moderately adaptive to climate change. Also, high adaptive farmers obtain nine more bags of 50 kg bag of paddy rice than farmers with low adaptive capacities. Therefore, the more a farmer has the ability to adjust to climate change, the more the number of bags of rice he or she obtains. Rice farmers should be empowered through better extension services in order to attain high adaptive capacity status so as to help them obtain more rice output.

  15. New wine-growing regions of Brazil and their importance in the evolution of Brazilian wine

    Directory of Open Access Journals (Sweden)

    Wurz Douglas André

    2017-01-01

    . Add to this a dry, well-drained and granitic soil, especially for growing Syrah and Viogner. The São Francisco River Valley presents flat lands, at an altitude of 400 meters. Located outside the suitable range for growing grapes, this semi-arid region presents low rainfall (less than 500 mm a year and strong insolation. Its permeable clay soils have proven to be suitable for the acclimatization of grapevines such as Moscatel, Cabernet Sauvignon and Syrah.

  16. Dynamics of multiple insecticide resistance in the malaria vector Anopheles gambiae in a rice growing area in South-Western Burkina Faso

    Directory of Open Access Journals (Sweden)

    Ouédraogo Jean-Bosco

    2008-09-01

    Full Text Available Abstract Background Insecticide resistance of the main malaria vector, Anopheles gambiae, has been reported in south-western Burkina Faso, West Africa. Cross-resistance to DDT and pyrethroids was conferred by alterations at site of action in the sodium channel, the Leu-Phe kdr mutation; resistance to organophosphates and carbamates resulted from a single point mutation in the oxyanion hole of the acetylcholinesterase enzyme designed as ace-1R. Methods An entomological survey was carried out during the rainy season of 2005 at Vallée du Kou, a rice growing area in south-western Burkina Faso. At the Vallée du Kou, both insecticide resistance mechanisms have been previously described in the M and S molecular forms of An. gambiae. This survey aimed i to update the temporal dynamics and the circumsporozoite infection rate of the two molecular forms M and S of An. gambiae ii to update the frequency of the Leu-Phe kdr mutation within these forms and finally iii to investigate the occurrence of the ace-1R mutation. Mosquitoes collected by indoor residual collection and by human landing catches were counted and morphologically identified. Species and molecular forms of An. gambiae, ace-1R and Leu-Phe kdr mutations were determined using PCR techniques. The presence of the circumsporozoite protein of Plasmodium falciparum was determined using ELISA. Results Anopheles gambiae populations were dominated by the M form. However the S form occurred in relative important proportion towards the end of the rainy season with a maximum peak in October at 51%. Sporozoite rates were similar in both forms. The frequency of the Leu-Phe kdr mutation in the S form reached a fixation level while it is still spreading in the M form. Furthermore, the ace-1R mutation prevailed predominately in the S form and has just started spreading in the M form. The two mutations occurred concomitantly both in M and S populations. Conclusion These results showed that the Vallée du Kou

  17. Geographically Sourcing Cocaine’s Origin - Delineation of the Nineteen Major Coca Growing Regions in South America

    Science.gov (United States)

    Mallette, Jennifer R.; Casale, John F.; Jordan, James; Morello, David R.; Beyer, Paul M.

    2016-03-01

    Previously, geo-sourcing to five major coca growing regions within South America was accomplished. However, the expansion of coca cultivation throughout South America made sub-regional origin determinations increasingly difficult. The former methodology was recently enhanced with additional stable isotope analyses (2H and 18O) to fully characterize cocaine due to the varying environmental conditions in which the coca was grown. An improved data analysis method was implemented with the combination of machine learning and multivariate statistical analysis methods to provide further partitioning between growing regions. Here, we show how the combination of trace cocaine alkaloids, stable isotopes, and multivariate statistical analyses can be used to classify illicit cocaine as originating from one of 19 growing regions within South America. The data obtained through this approach can be used to describe current coca cultivation and production trends, highlight trafficking routes, as well as identify new coca growing regions.

  18. Distributions of Salmonella Subtypes Differ between Two U.S. Produce-Growing Regions

    Science.gov (United States)

    Danyluk, Michelle D.; Worobo, Randy W.; Wiedmann, Martin

    2014-01-01

    Salmonella accounts for approximately 50% of produce-associated outbreaks in the United States, several of which have been traced back to contamination in the produce production environment. To quantify Salmonella diversity and aid in identification of Salmonella contamination sources, we characterized Salmonella isolates from two geographically diverse produce-growing regions in the United States. Initially, we characterized the Salmonella serotype and subtype diversity associated with 1,677 samples collected from 33 produce farms in New York State (NYS). Among these 1,677 samples, 74 were Salmonella positive, yielding 80 unique isolates (from 147 total isolates), which represented 14 serovars and 23 different pulsed-field gel electrophoresis (PFGE) types. To explore regional Salmonella diversity associated with production environments, we collected a smaller set of samples (n = 65) from South Florida (SFL) production environments and compared the Salmonella diversity associated with these samples with the diversity found among NYS production environments. Among these 65 samples, 23 were Salmonella positive, yielding 32 unique isolates (from 81 total isolates), which represented 11 serovars and 17 different PFGE types. The most common serovars isolated in NYS were Salmonella enterica serovars Newport, Cerro, and Thompson, while common serovars isolated in SFL were Salmonella serovars Saphra and Newport and S. enterica subsp. diarizonae serovar 50:r:z. High PFGE type diversity (Simpson's diversity index, 0.90 ± 0.02) was observed among Salmonella isolates across both regions; only three PFGE types were shared between the two regions. The probability of three or fewer shared PFGE types was Salmonella isolates were considerably different between the two sampled regions. These findings suggest the potential for PFGE-based source tracking of Salmonella in production environments. PMID:24747908

  19. GROWING REGIONAL SCIENTIFIC MIGRATION AND MOBILITY: THE EUROPEAN UNION AND THE EASTERN PARTNERSHIP

    Directory of Open Access Journals (Sweden)

    Ganna KHARLAMOVA

    2016-11-01

    Full Text Available The article contributes to the growing strand of the literature on the scientific mobility and migration in the European Union (EU and the Eastern Partnership. The paper provides the quantitative assessment of the costs and benefits of ‘smart’ labour migration in the Eastern Partnership (EaP countries (particularly, Ukraine, explores the potential of future new rules for the mobility within the EU-EaP, and proposes some policy recommendations to enhance the benefits stemming from such flows. One of the rigorous idea – to provide an explanation whether the scientific migration and mobility, and remittances impact on economic development in the donor and recipient states, and, in particular, how important it is as a resource for the EaP enhancing. The convergence effect of scientific migration in the EU and the Eastern Partnership region is considered by means of calculative assessment.

  20. Compositional analyses of white, brown and germinated forms of popular Malaysian rice to offer insight into the growing diet-related diseases

    OpenAIRE

    Bilyaminu Abubakar; Hafeez Muhammad Yakasai; Norhasnida Zawawi; Maznah Ismail

    2018-01-01

    Diet-related metabolic diseases, and especially obesity, are metabolic disorders with multifactorial aetiologies. Diet has been a cornerstone in both the aetiology and management of this metabolic disorders. Rice, a staple food for over half of the world's population, could be exploited as part of the solution to check this menace which has been skyrocketing in the last decade. The present study investigated nine forms of rice from three widely grown Malaysian rice cultivars for in vitro and ...

  1. Cloning and characterization of stress responsive Glp genes and their promotor regions from rice (abstract)

    International Nuclear Information System (INIS)

    Naqvi, S.M.S.; Mahmood, T.

    2005-01-01

    Plants respond to a number of environmental stimuli by modulating expression of genes. One such family of genes is now known as germin/germin-like protein genes (Glps). In order to detect any Glp gene response in rice, a pair of degenerate primers was designed based on consensus region from Glp sequences in Genbank. Using these primers a DNA fragment of about 550 bp was obtained by PCR amplification from genomic template. This 550 bp DNA was used as probe in Northern analysis. These studies provided evidence pointing to differential response of Glp expression to salt stress. RNA obtained from the roots was used for synthesis of cDNA. This cDNA was amplifiable with sense primer (RGLP1) from above mentioned pair and oligo-(dt) yielding a fragment of approx. 800 bp. Restriction analysis revealed that the PCR product was heterogeneous. After establishing that 800 bp fragment was the desired product, it was cloned in pCRII-TOPO. Five clones were picked up and analyzed by restriction analysis and sequencing. Two different Glp cDNAs were represented by these partial clones. Remaining sequence of the 5' end for clone 4 and 16 was obtained by Rapid Amplification of cDNA ends (RACE). The resultant sequences have been submitted to Genbank as Oryza sativa Rice Germin-like Protein 1 and 2 (osRGLP1 and 2). When full length genes corresponding to these sequences were amplified from genomic templates, resulting fragments were nearly 150 by larger than cDNAs. Cloning of structural genes for osRGLP1 revealed presence of a 162 bp intron in the coding region near 3' end. Preliminary evidence shows that expression of both osRGLP1 and 2 is severely reduced during salt stress. Another approach to establish both osRGLP1 and 2 genes involvement in stress tolerance is to study the ability of their promotor regions to drive expression of some reporter gene during stress. Promotor regions of about 1100 bp has been amplified and cloned and has been confirmed by restriction analysis and nested

  2. Fiber Length of Calabrian Pine as Related to Position in Cross Section and Growing Region

    Directory of Open Access Journals (Sweden)

    Ibrahim BEKTAS

    2017-03-01

    Full Text Available This paper provides a better understanding of the variation of growing regions and differences in distance from pith to bark on wood fiber lengths. For this aim, Calabrian pines collected from five different growth regions, namely Kahramanmaras, Burdur, Muğla, İzmir and Balıkesir, were used to determine fiber lengths. In experiment, specimens prepared from logs cross section which is taken from three different distances from pith to bark (r/6, 3r/6 and 5r/6 were evaluated. As a result of analysis, distance from pith in the same area have shown a significant effect on fiber dimensions. In the evaluation among the habitat, it was obtained that r/6 and 3r/6 have a significant effect (p<0.001, p<0.05 respectively on fiber dimensions, however; 5r/6 has a nonsignificant. The results showed that, the quite suitable habitat in terms of fiber lenghts is Balıkesir which has high sand (64.4%, moderate clay (24.2% and lime-poor (3.1% soils. These results will make a positive contribution undoubtedly for the plantations will be established in the future of this species.

  3. Automated lung tumor segmentation for whole body PET volume based on novel downhill region growing

    Science.gov (United States)

    Ballangan, Cherry; Wang, Xiuying; Eberl, Stefan; Fulham, Michael; Feng, Dagan

    2010-03-01

    We propose an automated lung tumor segmentation method for whole body PET images based on a novel downhill region growing (DRG) technique, which regards homogeneous tumor hotspots as 3D monotonically decreasing functions. The method has three major steps: thoracic slice extraction with K-means clustering of the slice features; hotspot segmentation with DRG; and decision tree analysis based hotspot classification. To overcome the common problem of leakage into adjacent hotspots in automated lung tumor segmentation, DRG employs the tumors' SUV monotonicity features. DRG also uses gradient magnitude of tumors' SUV to improve tumor boundary definition. We used 14 PET volumes from patients with primary NSCLC for validation. The thoracic region extraction step achieved good and consistent results for all patients despite marked differences in size and shape of the lungs and the presence of large tumors. The DRG technique was able to avoid the problem of leakage into adjacent hotspots and produced a volumetric overlap fraction of 0.61 +/- 0.13 which outperformed four other methods where the overlap fraction varied from 0.40 +/- 0.24 to 0.59 +/- 0.14. Of the 18 tumors in 14 NSCLC studies, 15 lesions were classified correctly, 2 were false negative and 15 were false positive.

  4. Attenuation correction with region growing method used in the positron emission mammography imaging system

    Science.gov (United States)

    Gu, Xiao-Yue; Li, Lin; Yin, Peng-Fei; Yun, Ming-Kai; Chai, Pei; Huang, Xian-Chao; Sun, Xiao-Li; Wei, Long

    2015-10-01

    The Positron Emission Mammography imaging system (PEMi) provides a novel nuclear diagnosis method dedicated for breast imaging. With a better resolution than whole body PET, PEMi can detect millimeter-sized breast tumors. To address the requirement of semi-quantitative analysis with a radiotracer concentration map of the breast, a new attenuation correction method based on a three-dimensional seeded region growing image segmentation (3DSRG-AC) method has been developed. The method gives a 3D connected region as the segmentation result instead of image slices. The continuity property of the segmentation result makes this new method free of activity variation of breast tissues. The threshold value chosen is the key process for the segmentation method. The first valley in the grey level histogram of the reconstruction image is set as the lower threshold, which works well in clinical application. Results show that attenuation correction for PEMi improves the image quality and the quantitative accuracy of radioactivity distribution determination. Attenuation correction also improves the probability of detecting small and early breast tumors. Supported by Knowledge Innovation Project of The Chinese Academy of Sciences (KJCX2-EW-N06)

  5. Compositional analyses of white, brown and germinated forms of popular Malaysian rice to offer insight into the growing diet-related diseases

    Directory of Open Access Journals (Sweden)

    Bilyaminu Abubakar

    2018-04-01

    Full Text Available Diet-related metabolic diseases, and especially obesity, are metabolic disorders with multifactorial aetiologies. Diet has been a cornerstone in both the aetiology and management of this metabolic disorders. Rice, a staple food for over half of the world's population, could be exploited as part of the solution to check this menace which has been skyrocketing in the last decade. The present study investigated nine forms of rice from three widely grown Malaysian rice cultivars for in vitro and in vivo (glycaemic index and load properties that could translate clinically into a lower predisposition to diet-related diseases. The germinated brown forms of MRQ 74 and MR 84 rice cultivars had high amylose content percentages (25.7% and 25.0%, high relative percentage antioxidant scavenging abilities of 85.0% and 91.7%, relatively low glycaemic indices (67.6 and 64.3 and glycaemic load (32.3 and 30.1 values, and modest glucose uptake capabilities of 33.69% and 31.25%, respectively. The results show that all things being equal, rice cultivars that are germinated and high in amylose content when compared to their white and low amylose counterparts could translate into a lower predisposition to diet-related diseases from the dietary point of view in individuals who consume this cereal as a staple food. Keywords: Brown rice, Diet-related metabolic diseases, Germinated brown rice, White rice

  6. Automatic segmentation of meningioma from non-contrasted brain MRI integrating fuzzy clustering and region growing

    Directory of Open Access Journals (Sweden)

    Liao Chun-Chih

    2011-08-01

    Full Text Available Abstract Background In recent years, magnetic resonance imaging (MRI has become important in brain tumor diagnosis. Using this modality, physicians can locate specific pathologies by analyzing differences in tissue character presented in different types of MR images. This paper uses an algorithm integrating fuzzy-c-mean (FCM and region growing techniques for automated tumor image segmentation from patients with menigioma. Only non-contrasted T1 and T2 -weighted MR images are included in the analysis. The study's aims are to correctly locate tumors in the images, and to detect those situated in the midline position of the brain. Methods The study used non-contrasted T1- and T2-weighted MR images from 29 patients with menigioma. After FCM clustering, 32 groups of images from each patient group were put through the region-growing procedure for pixels aggregation. Later, using knowledge-based information, the system selected tumor-containing images from these groups and merged them into one tumor image. An alternative semi-supervised method was added at this stage for comparison with the automatic method. Finally, the tumor image was optimized by a morphology operator. Results from automatic segmentation were compared to the "ground truth" (GT on a pixel level. Overall data were then evaluated using a quantified system. Results The quantified parameters, including the "percent match" (PM and "correlation ratio" (CR, suggested a high match between GT and the present study's system, as well as a fair level of correspondence. The results were compatible with those from other related studies. The system successfully detected all of the tumors situated at the midline of brain. Six cases failed in the automatic group. One also failed in the semi-supervised alternative. The remaining five cases presented noticeable edema inside the brain. In the 23 successful cases, the PM and CR values in the two groups were highly related. Conclusions Results indicated

  7. CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice[C][W

    Science.gov (United States)

    Miao, Chunbo; Tang, Ding; Zhang, Honggen; Wang, Mo; Li, Yafei; Tang, Shuzhu; Yu, Hengxiu; Gu, Minghong; Cheng, Zhukuan

    2013-01-01

    In meiosis, homologous recombination entails programmed DNA double-strand break (DSB) formation and synaptonemal complex (SC) assembly coupled with the DSB repair. Although SCs display extensive structural conservation among species, their components identified are poorly conserved at the sequence level. Here, we identified a novel SC component, designated CENTRAL REGION COMPONENT1 (CRC1), in rice (Oryza sativa). CRC1 colocalizes with ZEP1, the rice SC transverse filament protein, to the central region of SCs in a mutually dependent fashion. Consistent with this colocalization, CRC1 interacts with ZEP1 in yeast two-hybrid assays. CRC1 is orthologous to Saccharomyces cerevisiae pachytene checkpoint2 (Pch2) and Mus musculus THYROID RECEPTOR-INTERACTING PROTEIN13 (TRIP13) and may be a conserved SC component. Additionally, we provide evidence that CRC1 is essential for meiotic DSB formation. CRC1 interacts with HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 (PAIR1) in vitro, suggesting that these proteins act as a complex to promote DSB formation. PAIR2, the rice ortholog of budding yeast homolog pairing1, is required for homologous chromosome pairing. We found that CRC1 is also essential for the recruitment of PAIR2 onto meiotic chromosomes. The roles of CRC1 identified here have not been reported for Pch2 or TRIP13. PMID:23943860

  8. Central region component1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice.

    Science.gov (United States)

    Miao, Chunbo; Tang, Ding; Zhang, Honggen; Wang, Mo; Li, Yafei; Tang, Shuzhu; Yu, Hengxiu; Gu, Minghong; Cheng, Zhukuan

    2013-08-01

    In meiosis, homologous recombination entails programmed DNA double-strand break (DSB) formation and synaptonemal complex (SC) assembly coupled with the DSB repair. Although SCs display extensive structural conservation among species, their components identified are poorly conserved at the sequence level. Here, we identified a novel SC component, designated central region component1 (CRC1), in rice (Oryza sativa). CRC1 colocalizes with ZEP1, the rice SC transverse filament protein, to the central region of SCs in a mutually dependent fashion. Consistent with this colocalization, CRC1 interacts with ZEP1 in yeast two-hybrid assays. CRC1 is orthologous to Saccharomyces cerevisiae pachytene checkpoint2 (Pch2) and Mus musculus THYROID receptor-interacting protein13 (TRIP13) and may be a conserved SC component. Additionally, we provide evidence that CRC1 is essential for meiotic DSB formation. CRC1 interacts with homologous pairing aberration in rice meiosis1 (PAIR1) in vitro, suggesting that these proteins act as a complex to promote DSB formation. PAIR2, the rice ortholog of budding yeast homolog pairing1, is required for homologous chromosome pairing. We found that CRC1 is also essential for the recruitment of PAIR2 onto meiotic chromosomes. The roles of CRC1 identified here have not been reported for Pch2 or TRIP13.

  9. (PGMS) rice

    African Journals Online (AJOL)

    user

    2011-04-18

    Apr 18, 2011 ... tics, led us to predict that pollen cell abortion in this type of rice when ... averages of natural day-light-lengths and temperatures were used. A natural long ... blocks were allowed to grow under natural growth conditions (which.

  10. Application of nuclear technologies for growing of fruits which are of regional importance

    International Nuclear Information System (INIS)

    Sultanova, Z.K.; Kharlamova, N.A.; Aidarkhanova, G.S.; Kudabayev, A.B.; Andropenkov, S.A.; Maltseva, R.M.

    2002-01-01

    Application of recent achievements of nuclear techniques in different applied branches develops in such main directions as radiation-biological technologies under stimulation of plants, sterilization, increasing of storage terms, disinfestation of foodstuff, forage, raw material of animal and vegetable origin, dressing, instruments, which cannot be exposed to thermal and chemical processing. It is of practical interest the irradiation of fruits and berries cuttings, which are of regional importance and been growing in nurseries. This method is already widely introduced into practice as one of efficient methods. Aim of research was the optimal irradiation dose selection for stimulation of currant cuttings gemmas before bedding out. The sorts of black and goldish currants were used in the experiment. Irradiation was conducted in 60 Co gamma-ray source. As the study materials the black currant cuttings of the 'Katyusha' sort and goldish currants of the sort 'Uzbekistanskaya' were used. For each variant 20 cuttings were prepared.Cuttings were bedded out. Drop irrigation was employed. In the sequel agricultural monitoring was carried out. The results of rooting and development of irradiated samples will be presented in report

  11. World oil demand's shift toward faster growing and less price-responsive products and regions

    International Nuclear Information System (INIS)

    Dargay, Joyce M.; Gately, Dermot

    2010-01-01

    Using data for 1971-2008, we estimate the effects of changes in price and income on world oil demand, disaggregated by product - transport oil, fuel oil (residual and heating oil), and other oil - for six groups of countries. Most of the demand reductions since 1973-74 were due to fuel-switching away from fuel oil, especially in the OECD; in addition, the collapse of the Former Soviet Union (FSU) reduced their oil consumption substantially. Demand for transport and other oil was much less price-responsive, and has grown almost as rapidly as income, especially outside the OECD and FSU. World oil demand has shifted toward products and regions that are faster growing and less price-responsive. In contrast to projections to 2030 of declining per-capita demand for the world as a whole - by the U.S. Department of Energy (DOE), International Energy Agency (IEA) and OPEC - we project modest growth. Our projections for total world demand in 2030 are at least 20% higher than projections by those three institutions, using similar assumptions about income growth and oil prices, because we project rest-of-world growth that is consistent with historical patterns, in contrast to the dramatic slowdowns which they project. (author)

  12. Insects associated with tropical foliage produced in the coffee growing region of Colombia

    Directory of Open Access Journals (Sweden)

    Luis F. Aristizábal

    2013-09-01

    Full Text Available We conducted a survey of insects and pest management practices on 34 farms growing ornamental tropical foliage plants in the central coffee region of Colombia over two years. Tropical foliage provided habitat for a diverse range of insects. In total, phytophagous or detritivorous insects from six orders, 40 families and 62 genera were collected. The most common were Hemiptera (29 genera from 16 families, followed by Coleoptera (17 genera from 4 families, Diptera (5 genera from 5 families, Lepidoptera (5 genera from 4 families, Hymenoptera (3 genera from 2 families and Orthoptera (2 genera from 2 families. The most common phytophagous species were leaf cutting ants (Atta and Acromyrmex spp., leaf beetles (Chrysomelidae, leafhoppers (Cicadellidae, stinkbugs (Pentatomidae, squash bugs (Coreidae, tree hoppers (Membracidae and plant hoppers (Fulgoridae. Beneficial insects identified from tropical foliage included predators and parasitoids amongst 5 orders, 12 families and 22 genera. The most abundant were predators among the Coccinellidae, Chrysopidae, Reduviidae, Lycidae and Formicidae but only low numbers of parasitoids (Ichneumonidae, Braconidae and Tachinidae were collected. A pest management questionnaire given to growers revealed a preponderance of reliance on broad spectrum insecticides with a smaller number of growers (approximately one third also using some biological control methods. Our survey contributes basic information regarding diversity of Neotropical insects associated with ornamental foliage plants.

  13. Radioactivity in wild-growing mushrooms of the Calabria region, south of Italy

    Science.gov (United States)

    Caridi, F.; Belmusto, G.

    2017-01-01

    Wild-growing mushrooms are a complementary foodstuff, widely consumed as a delicacy, in Italy. They are considered excellent bioindicators of environmental pollution and the accumulation of radionuclides can pose a radiological hazard. 137Cs and 40K activity concentrations were measured through HPGe gamma-spectrometry in different mushroom species (Agaricus arvensis, Leccinum quercinum, Boletus aereus, Lactarius deliciosus, Boletus edulis, Macrolepiota konradii, Cantharellus lutescens) collected from four different sampling sites in the Calabria region, south of Italy. Experimental values were found to be in the range from (0.3 ± 0.1) Bq/kg f.m. (fresh mass) to (73.1 ± 4.6) Bq/kg f.m. for 137Cs and from (46.9 ± 10.7) Bq/kg f.m. to (161.3 ± 12.9) Bq/kg f.m. for 40K, respectively. All values were much lower than the specific activity limit set by the international legislation at 600 Bq/kg f.m. for 137Cs and at 1,258 Bq/kg f.m. for 40K, respectively. Experimental activity concentrations allowed us to determine the effective dose due to the ingestion of mushrooms by adult members of the population. It was found in the range from 0.25 to 1.35 μSv/y, much lower than the recommended level for the public (1 mSv/y). Data obtained in this article provide useful information on the environmental risk and can be further used for a radiological mapping of the studied area.

  14. Automated measurement of epidermal thickness from optical coherence tomography images using line region growing

    Science.gov (United States)

    Delacruz, Jomer; Weissman, Jesse; Gossage, Kirk

    2010-02-01

    Optical Coherence Tomography (OCT) is a non-invasive imaging modality that acquires cross sectional images of tissue in-vivo. It accelerates skin diagnosis by eliminating invasive biopsy and laborious histology in the process. Dermatologists have widely used it for looking at morphology of skin diseases such as psoriasis, dermatitis, basal cell carcinoma etc. Skin scientists have also successfully used it for looking at differences in epidermal thickness and its underlying structure with respect to age, body sites, ethnicity, gender, and other related factors. Similar to other in-vivo imaging systems, OCT images suffer from a high degree of speckle and noise content, which hinders examination of tissue structures. Most of the previous work in OCT segmentation of skin was done manually. This compromised the quality of the results by limiting the analyses to a few frames per area. In this paper, we discuss a region growing method for automatic identification of the upper and lower boundaries of the epidermis in living human skin tissue. This image analysis method utilizes images obtained from a frequency-domain OCT. This system is high-resolution and high-speed, and thus capable of capturing volumetric images of the skin in short time. The three-dimensional (3D) data provides additional information that is used in the segmentation process to help compensate for the inherent noise in the images. This method not only provides a better estimation of the epidermal thickness, but also generates a 3D surface map of the epidermal-dermal junction, from which underlying topography can be visualized and further quantified.

  15. Early mixed farming of millet and rice 7800 years ago in the Middle Yellow River region, China.

    Directory of Open Access Journals (Sweden)

    Jianping Zhang

    Full Text Available The Peiligang Culture (9000-7000 cal. yr BP in the Middle Yellow River region, North China, has long been considered representative of millet farming. It is still unclear, however, if broomcorn millet or foxtail millet was the first species domesticated during the Peiligang Culture. Furthermore, it is also unknown whether millet was cultivated singly or together with rice at the same period. In this study, phytolith analysis of samples from the Tanghu archaeological site reveals early crop information in the Middle Yellow River region, China. Our results show that broomcorn millet was the early dry farming species in the Peiligang Culture at 7800 cal. yr BP, while rice cultivation took place from 7800 to 4500 cal. yr BP. Our data provide new evidence of broomcorn millet and rice mixed farming at 7800 cal. yr BP in the Middle Yellow River region, which has implications for understanding the domestication process of the two crops, and the formation and continuance of the Ancient Yellow River Civilization.

  16. Organophosphate pesticide exposure in school-aged children living in rice and aquacultural farming regions of Thailand.

    Science.gov (United States)

    Rohitrattana, Juthasiri; Siriwong, Wattasit; Tunsaringkarn, Tanasorn; Panuwet, Parinya; Ryan, P Barry; Barr, Dana Boyd; Robson, Mark G; Fiedler, Nancy

    2014-01-01

    Organophosphate pesticides (OPs) are widely used in agricultural sectors in Thailand. Previous studies have documented that children residing in agricultural areas have higher exposure to OPs than children living in other residential areas. The objective of this study was to quantify urinary biomarkers of OP exposure and determine the environmental conditions and activities that predict their levels among children living in Central Thailand farming regions. In October 2011, 53 6-8-year-old participants were recruited from Pathum Thani Province, Thailand. Twenty-four lived in rice farming communities at Khlong Luang District where OPs are the pesticides used frequently. Twenty-nine participants, living in aquacultural farming communities at Lum Luk Ka District where OPs are not used, were recruited to serve as controls for pathways of exposure (e.g., residential, dietary) other than occupational/paraoccupational exposures encountered in rice farming. Household environments and participants' activities were assessed using a parental structured interview. Urine samples (first morning voids) were collected from participants for OP urinary metabolite (i.e., dialkylphosphates [DAPs] and 3,5,6-trichloro-2-pyridinol [TCPy]) measurements. The levels of most urinary OP metabolites were significantly higher in participants who lived in a rice farming community than those who lived in an aquacultural farming community (P farms (∑DAP: P = .001; TCPy: P = .001) and living in a rice farming community (∑DAP: P = .009; TCPy: P farm (P = .03), being with parent while working on a farm (P = .02), playing on a farm (P = .03), and the presence of observable dirt accumulated on the child's body (P = .02). In conclusion, OP metabolite levels among children who live in rice farming communities were strongly influenced by farming activity, household environments, and child behaviors, suggesting that these are the primary pathways in which children living in these agricultural

  17. Spatially explicit exposure assessment for small streams in catchments of the orchard growing region `Lake Constance

    Science.gov (United States)

    Golla, B.; Bach, M.; Krumpe, J.

    2009-04-01

    1. Introduction Small streams differ greatly from the standardised water body used in the context of aquatic risk assessment for the regulation of plant protection products in Germany. The standard water body is static, with a depth of 0.3 m and a width of 1.0 m. No dilution or water replacement takes place. Spray drift happens always in direction to the water body. There is no variability in drift deposition rate (90th percentile spray drift deposition values [2]). There is no spray drift filtering by vegetation. The application takes place directly adjacent to the water body. In order to establish a more realistic risk assessment procedure the Federal Office for Consumer Protection and Food Safety (BVL) and the Federal Environment Agency (UBA) aggreed to replace deterministic assumptions with data distributions and spatially explicit data and introduce probabilistic methods [3, 4, 5]. To consider the spatial and temporal variability in the exposure situations of small streams the hydraulic and morphological characteristics of catchments need to be described as well as the spatial distribution of fields treated with pesticides. As small streams are the dominant type of water body in most German orchard regions, we use the growing region Lake Constance as pilot region. 2. Materials and methods During field surveys we derive basic morphological parameters for small streams in the Lake Constance region. The mean water width/depth ratio is 13 with a mean depth of 0.12 m. The average residence time is 5.6 s/m (n=87) [1]. Orchards are mostly located in the upper parts of the catchments. Based on an authoritative dataset on rivers and streams of Germany (ATKIS DLM25) we constructed a directed network topology for the Lake Constance region. The gradient of the riverbed is calculated for river stretches of > 500 m length. The network for the pilot region consists of 2000 km rivers and streams. 500 km stream length are located within a distance of 150 m to orchards. Within

  18. Spatio-temporal reconstruction of air temperature maps and their application to estimate rice growing season heat accumulation using multi-temporal MODIS data.

    Science.gov (United States)

    Zhang, Li-wen; Huang, Jing-feng; Guo, Rui-fang; Li, Xin-xing; Sun, Wen-bo; Wang, Xiu-zhen

    2013-02-01

    The accumulation of thermal time usually represents the local heat resources to drive crop growth. Maps of temperature-based agro-meteorological indices are commonly generated by the spatial interpolation of data collected from meteorological stations with coarse geographic continuity. To solve the critical problems of estimating air temperature (T(a)) and filling in missing pixels due to cloudy and low-quality images in growing degree days (GDDs) calculation from remotely sensed data, a novel spatio-temporal algorithm for T(a) estimation from Terra and Aqua moderate resolution imaging spectroradiometer (MODIS) data was proposed. This is a preliminary study to calculate heat accumulation, expressed in accumulative growing degree days (AGDDs) above 10 °C, from reconstructed T(a) based on MODIS land surface temperature (LST) data. The verification results of maximum T(a), minimum T(a), GDD, and AGDD from MODIS-derived data to meteorological calculation were all satisfied with high correlations over 0.01 significant levels. Overall, MODIS-derived AGDD was slightly underestimated with almost 10% relative error. However, the feasibility of employing AGDD anomaly maps to characterize the 2001-2010 spatio-temporal variability of heat accumulation and estimating the 2011 heat accumulation distribution using only MODIS data was finally demonstrated in the current paper. Our study may supply a novel way to calculate AGDD in heat-related study concerning crop growth monitoring, agricultural climatic regionalization, and agro-meteorological disaster detection at the regional scale.

  19. Compositional analyses of white, brown and germinated forms of popular Malaysian rice to offer insight into the growing diet-related diseases.

    Science.gov (United States)

    Abubakar, Bilyaminu; Yakasai, Hafeez Muhammad; Zawawi, Norhasnida; Ismail, Maznah

    2018-04-01

    Diet-related metabolic diseases, and especially obesity, are metabolic disorders with multifactorial aetiologies. Diet has been a cornerstone in both the aetiology and management of this metabolic disorders. Rice, a staple food for over half of the world's population, could be exploited as part of the solution to check this menace which has been skyrocketing in the last decade. The present study investigated nine forms of rice from three widely grown Malaysian rice cultivars for in vitro and in vivo (glycaemic index and load) properties that could translate clinically into a lower predisposition to diet-related diseases. The germinated brown forms of MRQ 74 and MR 84 rice cultivars had high amylose content percentages (25.7% and 25.0%), high relative percentage antioxidant scavenging abilities of 85.0% and 91.7%, relatively low glycaemic indices (67.6 and 64.3) and glycaemic load (32.3 and 30.1) values, and modest glucose uptake capabilities of 33.69% and 31.25%, respectively. The results show that all things being equal, rice cultivars that are germinated and high in amylose content when compared to their white and low amylose counterparts could translate into a lower predisposition to diet-related diseases from the dietary point of view in individuals who consume this cereal as a staple food. Copyright © 2017. Published by Elsevier B.V.

  20. Global left ventricular function in cardiac CT. Evaluation of an automated 3D region-growing segmentation algorithm

    International Nuclear Information System (INIS)

    Muehlenbruch, Georg; Das, Marco; Hohl, Christian; Wildberger, Joachim E.; Guenther, Rolf W.; Mahnken, Andreas H.; Rinck, Daniel; Flohr, Thomas G.; Koos, Ralf; Knackstedt, Christian

    2006-01-01

    The purpose was to evaluate a new semi-automated 3D region-growing segmentation algorithm for functional analysis of the left ventricle in multislice CT (MSCT) of the heart. Twenty patients underwent contrast-enhanced MSCT of the heart (collimation 16 x 0.75 mm; 120 kV; 550 mAseff). Multiphase image reconstructions with 1-mm axial slices and 8-mm short-axis slices were performed. Left ventricular volume measurements (end-diastolic volume, end-systolic volume, ejection fraction and stroke volume) from manually drawn endocardial contours in the short axis slices were compared to semi-automated region-growing segmentation of the left ventricle from the 1-mm axial slices. The post-processing-time for both methods was recorded. Applying the new region-growing algorithm in 13/20 patients (65%), proper segmentation of the left ventricle was feasible. In these patients, the signal-to-noise ratio was higher than in the remaining patients (3.2±1.0 vs. 2.6±0.6). Volume measurements of both segmentation algorithms showed an excellent correlation (all P≤0.0001); the limits of agreement for the ejection fraction were 2.3±8.3 ml. In the patients with proper segmentation the mean post-processing time using the region-growing algorithm was diminished by 44.2%. On the basis of a good contrast-enhanced data set, a left ventricular volume analysis using the new semi-automated region-growing segmentation algorithm is technically feasible, accurate and more time-effective. (orig.)

  1. Growing Significance of EU Institutions in Promotion of Inter-regional policies

    Directory of Open Access Journals (Sweden)

    Ella V. Ermakova

    2014-01-01

    Full Text Available The article explores the variety of tools and vehicles applied within the EU to expand the prerogative of the regions of the EU member states. The author uses as an example the inter-regional policies in Belgium in respect of the Flemish Region and the Walloon Region. The author analyzes the mechanisms of promotion of external regional relations in Belgium as a means of addressing different problems both on national and all-European level, supporting the arguments and conclusions by examples of relevant EU initiatives. The article details the activities of the EU Regional Committee (RC, the EU advisory body with the powers of political initiative, upholding the principle ofsubsidarity in the implementation of the EU member states' regional policies. The involvement of the Flemish Region and the Walloon Region in the activities of EU RC is described and summarized. As a case study, the article deals with Belgium's rotating six months presidency in the EUin 2010 when the country, which was going through a severe political crisis with no federal government in place, was represented by the two regions. The special focus of the article is on the strategic EU program "Europe2020" and its implementation by the regions of Belgium. There is an account of the initiatives undertaken by the Flemish Region and the Walloon Region within the framework of this program outlining the interaction of the two regions. The author provides a comprehensive analysis of the involvement of the Flemish Region and the Walloon Region with various EU institutions describing how each party achieves the promotion of its regional interests. Within this context, it is a noteworthy development that the Flemish Region is participating in the international program "Pact 2020" on energy all by its own. The article features quotations by Flemish and Walloon political figures which serve as an illustration of the prevailing attitudes in the Belgian society to the process of

  2. Intraspecific Variability of Rotylenchulus reniformis from Cotton-growing Regions in the United States

    OpenAIRE

    Agudelo, Paula; Robbins, Robert T.; Stewart, James McD.; Szalanski, Allen L.

    2005-01-01

    Reniform nematode (Rotylenchulus reniformis) is a major pest of cotton in the southeastern United States. The objective of this study was to examine the variation of reniform nematode populations from cotton-growing locations in the United States where it is prevalent. Multivariate analysis of variance and discriminant analysis were used to determine the variability of morphology in males and immature females. Reproduction indices of populations were measured on selected soybean and cotton ge...

  3. Organic rice IPM research update in the United States

    Science.gov (United States)

    U.S. organic rice production has steadily increased over the past decade, with a majority of the acreage being grown in the southern region. Because of the warm and humid environments and the long growing season in the region, weed, disease and insect pests are among the primary factors limiting org...

  4. Can the parasitic weeds Striga asiatica and Rhamphicarpa fistulosa co-occur in rain-fed rice?

    NARCIS (Netherlands)

    Kabiri, S.; Rodenburg, J.; Kayeke, J.; Ast, van A.; Makokha, D.W.; Msangi, S.H.; Irakiza, R.; Bastiaans, L.

    2015-01-01

    Striga asiatica and Rhamphicarpa fistulosa are important parasitic weeds of rain-fed rice, partly distributed in similar regions in sub-Saharan Africa (SSA). It is not evident whether their ecologies are mutually exclusive or partially overlapping. In Kyela, a rice-growing area in south Tanzania

  5. Phytase enzyme in diets containing defatted rice bran for growing swine Enzima fitase dietas com farelo de arroz desengordurado para suínos em crescimento

    Directory of Open Access Journals (Sweden)

    José Aparecido Moreira

    2003-12-01

    Full Text Available Organic phosphorus is poorly utilized by monogastric animals because they lack phytase, the enzyme that cleaves the ortho-phosphate groups from the phytate molecule. Diets fed to pigs are supplemented with inorganic P, and this can increase environmental pollution and diet costs. Sixty mixed sex, half-breed pigs, were used to evaluate the effect of increasing dietary levels of phytase (253, 759, 1265 and 1748 PU kg-1 feed on animal performance as compared to a control without phytase but supplemented with dicalcium phosphate. Enzyme levels did not affect daily feed intake, food conversion, average daily weight gain, plasma P and Ca, calcium and phosphorus in bone ash, and the calcium/phosphorus ratio in the plasma and bones. A quadratic relationship between phytase levels and the percentages of P and Ca in bone ash was observed, reaching a maximum at the 880 and 879 PU levels, respectively. Animals fed diets containing phytase presented low plasma P values when compared to the control, but no effects were observed for the regression analysis. Using 759 PU phytase in rations containing corn, soybean bran and defatted rice bran for growing pigs can eliminate the use of traditional sources of P.Os animais monogástricos não aproveitam eficientemente o P orgânico das dietas, pois não sintetizam a enzima fitase, sendo necessária a suplementação das rações com P inorgânico, podendo elevar o custo das dietas e a poluição ambiental. Foram utilizados 60 leitões mestiços (machos castrados e fêmeas para avaliar a eficácia dos níveis dietéticos crescentes da enzima fitase (253, 759, 1265 e 1748 UF kg-1 de ração sobre os parâmetros de desempenho e comparar com o tratamento testemunha que diferia dos demais por não conter fitase e por conter fosfato bicálcico. Os níveis da enzima fitase não afetaram o consumo diário de ração, conversão alimentar, ganho diário de peso, P e Ca no plasma, cinzas no osso e relação cálcio e f

  6. Long-term effects of lowland properties system on soil physicochemical properties and rice yield in Ashanti Region of Ghana

    Energy Technology Data Exchange (ETDEWEB)

    Obalum, S. E.; Oppong, J.; Nwite, J. C.; Watanabe, Y.; Buri, M. M.; Igwe, C. A.; Wakatsuki, T.

    2012-11-01

    Lowland sawah is viewed as a sustainable alternative to traditional rice culture in West Africa. Sawah (a bund-demarcated, puddled, leveled, and water-regulated rice field) has received growing research attention lately, but no data exist yet on the systems long-term agronomic impact. In a clayey inland-valley soil in southern Ghana, 10-year-old sawah plots (OSP), fresh sawah plots (FSP), and non-sawah plots (NSP) were maintained under both ponded and nonponded conditions in 2007. The OSP enhanced soil status of exchangeable nutrients compared to NSP. There were relative improvements in soil bulk density, total porosity, and field moisture content (OSP = FSP > NSP), with clear benefits of ponding over non-ponding in OSP. The NSP was so unsustainable that it showed less favourable values of these variables than an adjacent fallowed plot. These soil variables deteriorated with time, with significant differences in FSP. Soil moisture retention data for tension range of 0-300 kPa depicted the importance of puddling and ponding. During 2001-2009, OSP consistently out-yielded NSP by five times on average. During 2007-2009 when all three plots co-existed, grain yields averaged 5.80, 4.80 and 1.10 Mg ha-1 in OSP, FSP and NSP, respectively. In 2007 yields, OSP minus FSP was higher than NSP; in 2008/2009, the opposite prevailed. These results highlight the agronomic benefits of continuous sawah-based rice production. Although the positive effects of puddling on the soil hydrophysical properties were largely responsible for the wide margin in yield between sawah and traditional systems, other yield-enhancing factors, particularly bunds for water control, were also lacking in the latter. (Author) 37 refs.

  7. Fate of N and relative efficiency of 15N-labeled organic materials applied to transplanted rice in northern Kyushu region of Japan

    International Nuclear Information System (INIS)

    Nishida, Mizuhiko; Tsuchiya, Kazunari; Yamamuro, Shigekazu

    2004-01-01

    Seven kinds of 15 N-labeled organic materials were applied to transplanted rice to investigate their N fate and relative efficiency in the northern Kyushu region of Japan. The 15 N-labeled organic materials examined in a micro-plot experiment were cattle manure compost, poultry manure compost, swine feces, rice straw compost, rice bran, rice straw, and wheat straw. Regarding swine feces, rice bran, and wheat straw, the direct evaluation of their N fate in paddy fields using 15 N organic materials has not been reported. A significant difference in the N fate in response to the type of organic materials was observed in the uptake rate by rice plants. The uptake rate at the maturity stage was significantly higher in poultry manure (29%), swine feces (25%), and rice bran (26%) than for the other organic materials (6-13%). Cattle manure compost showed the lowest value, namely 6-7%. Using the uptake rate of ( 15 NH 4 ) 2 SO 4 observed earlier, the relative efficiency of organ nic materials (relative uptake rate of organic material N to chemical fertilizer N) was calculated as the index of the organic material N efficiency. These relative efficiencies of organic materials derived from animal wastes were 16-19, 81, 72, and 71% for cattle manure compost, poultry manure compost, poultry manure compost without inherent NH 4 -H, and swine feces, respectively, and were similar to those estimated by indirect way. The relative efficiencies of organic materials derived from plant residues were 25-31, 73, 33 and 34% for rice straw compost, rice bran, rice straw, and wheat straw, respectively. The N uptake from the organic materials (OM-N uptake) in swine feces and cattle manure compost continued throughout the rice growth period, whereas the OM-N uptake of the other organic materials declined remarkably after 54 DAT. No significant difference was observed in the residual rate and the loss rate among the organic materials. However, some tendencies that might be related to the

  8. A two-stage rule-constrained seedless region growing approach for mandibular body segmentation in MRI.

    Science.gov (United States)

    Ji, Dong Xu; Foong, Kelvin Weng Chiong; Ong, Sim Heng

    2013-09-01

    Extraction of the mandible from 3D volumetric images is frequently required for surgical planning and evaluation. Image segmentation from MRI is more complex than CT due to lower bony signal-to-noise. An automated method to extract the human mandible body shape from magnetic resonance (MR) images of the head was developed and tested. Anonymous MR images data sets of the head from 12 subjects were subjected to a two-stage rule-constrained region growing approach to derive the shape of the body of the human mandible. An initial thresholding technique was applied followed by a 3D seedless region growing algorithm to detect a large portion of the trabecular bone (TB) regions of the mandible. This stage is followed with a rule-constrained 2D segmentation of each MR axial slice to merge the remaining portions of the TB regions with lower intensity levels. The two-stage approach was replicated to detect the cortical bone (CB) regions of the mandibular body. The TB and CB regions detected from the preceding steps were merged and subjected to a series of morphological processes for completion of the mandibular body region definition. Comparisons of the accuracy of segmentation between the two-stage approach, conventional region growing method, 3D level set method, and manual segmentation were made with Jaccard index, Dice index, and mean surface distance (MSD). The mean accuracy of the proposed method is [Formula: see text] for Jaccard index, [Formula: see text] for Dice index, and [Formula: see text] mm for MSD. The mean accuracy of CRG is [Formula: see text] for Jaccard index, [Formula: see text] for Dice index, and [Formula: see text] mm for MSD. The mean accuracy of the 3D level set method is [Formula: see text] for Jaccard index, [Formula: see text] for Dice index, and [Formula: see text] mm for MSD. The proposed method shows improvement in accuracy over CRG and 3D level set. Accurate segmentation of the body of the human mandible from MR images is achieved with the

  9. Rice as commodity and anti-commodity

    NARCIS (Netherlands)

    Richards, P.

    2016-01-01

    On the Upper West Africa coast rice belongs to two species — African rice (Oryza glaberrima Steud.) and Asian rice (Oryza sativa L.). African rice was domesticated in the region, perhaps three millennia ago, from a presumed wild ancestor, O. barthii. Asian rice was introduced via trans-Saharan

  10. Experimental observation and combined investigation of high-performance fusion of iron-region isotopes in optimal growing microbiological associations

    International Nuclear Information System (INIS)

    Vysotskii, Vladimir I.; Kornilova, Alla A.; Tashirev, Alexandr B.; Kornilova, Julia

    2006-01-01

    The report represents the results of combined (Moessbauer and mass-spectroscopy) examinations of isotopes transmutation process in growing microbiological associations in the iron-region of atomic mass (50 < A < 60). It was shown that the effectiveness of isotopes transmutation during the process of growth of microbiological associations at optimal conditions is by 10-20 times more than the effectiveness of the same transmutation in one-line' (clean) microbiological cultures. (author)

  11. Determinations of adaptation level of wine grape varieties in terms of climatic data in wine growing regions of turkey

    Directory of Open Access Journals (Sweden)

    Ateş Fadime

    2017-01-01

    Full Text Available Wine grapes are adapted to a wide range of climate; the best production occurs in regions that meet certain specific climatic conditions. Temperatures during the growing season can affect grape quality and viability. Beneficial climatic conditions will improve the wine's quality. In this study it is aimed that to determine suitable wine grape varieties for the cultivation in some areas of Southeastern Anatolia Region, Eastern Anatolia, Central Anatolia Region, Central Black Sea Region, Aegean Region and Marmara Region in Turkey with related to climate requirements. For this reason, long-term climatic data were collected by meteorological stations including, Diyarbakır (Çermik, Çüngüş, Central-Elazığ, Nevşehir (Central and Ürgüp, Ankara (Kalecik Tokat (Central, Erbaa, Niksar, İzmir (Seferihisar, Menderes, Urla ve Denizli (Çal ve Güney, Çanakkale (Bozcaada, Bayramiç, Tekirdağ. In this study heliotermic and hdyrothermic indices were calculated and evaluated for appropriate viticultural practice in this region. It was found that Boğazkere and Öküzgözü in Southeastern Anatolia Region and Eastern Anatolia Region; Kalecik Karası, Dimrit and Narince in Central Anatolia Region and Emir in Central Black Sea Region; Bornova Misketi, Cabernet Sauvignon, Syrah, Alicante Bouschet, Carignane, Kalecik Karası, Merlot, Öküzgözü, Çal Karası, Boğazkere, Sultani Çekirdeksiz in Aegean Region; Karasakız,Karalahana, Vasilaki, Cabernet Sauvignon, Merlot, Syrah, Alicante Bouschet, Semillion, Cinsaut, Yapıncak, Gamay, Merlot, Cabernet Sauvignon can be adapted and grown well in terms of climatic conditions in Marmara Region respectively.

  12. The Growing Trend of Moderate Preterm Births: An Ecological Study in One Region of Brazil.

    Directory of Open Access Journals (Sweden)

    Rosana Rosseto de Oliveira

    Full Text Available Preterm birth is a serious public health problem, as it is linked to high rates of neonatal and child morbidity and mortality, with Brazil listed among the countries with the ten highest numbers of premature births. Nonetheless, knowledge is scarce regarding prematurity and associated factors in mid-sized cities. The objective of this study was to analyze the trend of preterm births and associated factors in a municipality located in the state of Paraná, Brazil.This was an ecological time series study of births recorded into the Live Birth Information System for residents of Maringá, Paraná, Brazil, between 2000 and 2013. The polynomial regression model was used for trend analysis of preterm birth, characteristics of the mother, gestation and delivery, and newborn. The association with preterm birth was analyzed using odds ratio (OR.A total of 61,634 live births were analyzed, of which 5,632 were preterm births. Prematurity increased from 7.9% in 2000 to 11.2% in 2013 -an average increase of 0.54% per year (r2 = 0.93-with a growing share of moderate preterm births (32 to <37 weeks, which rose from 7.0% in 2000 to 9.7% in 2013. Between 2011 and 2013, multiple pregnancy (OR = 16.64; CI = 13.24-20.92, inadequate number of prenatal visits (OR = 2.81; CI = 2.51-3.15, Apgar score below 7 at 1 (OR = 4.07; CI = 3.55-4.67 and 5 minutes (OR = 10.88; CI = 7.71-15.36, low birth weight (OR = 38.75; CI = 33.72-44.55 and congenital malformations (OR = 3.18; CI = 2.14-4.74 were associated with preterm birth. A growing trend was observed for multiple pregnancies, with an average annual increase of 0.32% (r2 = 0.90, as well as for C-section birth (2.38% yearly increase. Of all newborn characteristics, Apgar score below 7 at 5 minutes (-0.19% per year and low birth weight (-1.43% decreased, whereas congenital malformations rose (0.20% per year.Efforts are required to prevent premature delivery, particularly during the moderate period, as well as greater care

  13. The Growing Trend of Moderate Preterm Births: An Ecological Study in One Region of Brazil.

    Science.gov (United States)

    Oliveira, Rosana Rosseto de; Melo, Emiliana Cristina; Falavina, Larissa Pereira; Mathias, Thais Aidar de Freitas

    2015-01-01

    Preterm birth is a serious public health problem, as it is linked to high rates of neonatal and child morbidity and mortality, with Brazil listed among the countries with the ten highest numbers of premature births. Nonetheless, knowledge is scarce regarding prematurity and associated factors in mid-sized cities. The objective of this study was to analyze the trend of preterm births and associated factors in a municipality located in the state of Paraná, Brazil. This was an ecological time series study of births recorded into the Live Birth Information System for residents of Maringá, Paraná, Brazil, between 2000 and 2013. The polynomial regression model was used for trend analysis of preterm birth, characteristics of the mother, gestation and delivery, and newborn. The association with preterm birth was analyzed using odds ratio (OR). A total of 61,634 live births were analyzed, of which 5,632 were preterm births. Prematurity increased from 7.9% in 2000 to 11.2% in 2013 -an average increase of 0.54% per year (r2 = 0.93)-with a growing share of moderate preterm births (32 to 2000 to 9.7% in 2013. Between 2011 and 2013, multiple pregnancy (OR = 16.64; CI = 13.24-20.92), inadequate number of prenatal visits (OR = 2.81; CI = 2.51-3.15), Apgar score below 7 at 1 (OR = 4.07; CI = 3.55-4.67) and 5 minutes (OR = 10.88; CI = 7.71-15.36), low birth weight (OR = 38.75; CI = 33.72-44.55) and congenital malformations (OR = 3.18; CI = 2.14-4.74) were associated with preterm birth. A growing trend was observed for multiple pregnancies, with an average annual increase of 0.32% (r2 = 0.90), as well as for C-section birth (2.38% yearly increase). Of all newborn characteristics, Apgar score below 7 at 5 minutes (-0.19% per year) and low birth weight (-1.43%) decreased, whereas congenital malformations rose (0.20% per year). Efforts are required to prevent premature delivery, particularly during the moderate period, as well as greater care during the prenatal period towards

  14. Malaysian weedy rice shows its true stripes: wild Oryza and elite rice cultivars shape agricultural weed evolution in Southeast Asia.

    Science.gov (United States)

    Song, Beng-Kah; Chuah, Tse-Seng; Tam, Sheh May; Olsen, Kenneth M

    2014-10-01

    Weedy rice is a close relative of domesticated rice (Oryza sativa) that competes aggressively with the crop and limits rice productivity worldwide. Most genetic studies of weedy rice have focused on populations in regions where no reproductively compatible wild Oryza species occur (North America, Europe and northern Asia). Here, we examined the population genetics of weedy rice in Malaysia, where wild rice (O. rufipogon) can be found growing in close proximity to cultivated and weedy rice. Using 375 accessions and a combined analysis of 24 neutral SSR loci and two rice domestication genes (sh4, controlling seed shattering, and Bh4, controlling hull colour), we addressed the following questions: (i) What is the relationship of Malaysian weedy rice to domesticated and wild rice, and to weedy rice strains in the USA? (ii) To what extent does the presence of O. rufipogon influence the genetic and phenotypic diversity of Malaysian weeds? (iii) What do the distributions of sh4 and Bh4 alleles and associated phenotypes reveal about the origin and contemporary evolution of Malaysian weedy rice? Our results reveal the following: independent evolutionary origins for Malaysian weeds and US strains, despite their very close phenotypic resemblance; wild-to-weed gene flow in Malaysian weed populations, including apparent adaptive introgression of seed-shattering alleles; and a prominent role for modern Malaysian cultivars in the origin and recent proliferation of Malaysian weeds. These findings suggest that the genetic complexity and adaptability of weedy crop relatives can be profoundly influenced by proximity to reproductively compatible wild and domesticated populations. © 2014 John Wiley & Sons Ltd.

  15. INDIA’S GROWING INFLUENCE IN STABILIZING REGIONAL SECURITY IN SOUTHEAST ASIA

    Science.gov (United States)

    2016-02-16

    East Policy’ focusing on engagement with Southeast Asia .2 Following the reforms, Indian economy grew rapidly with an...civilizational neighbors in Southeast Asia and East Asia .”19 Thus, LEP and recognition of India’s economic, political, security and cultural potential by ASEAN...point. 21 During the 10th East Asia Summit, Prime Minister Modi emphasized the importance of South East Asian region and informed that his

  16. Models to quantify excretion of dry matter, nitrogen, phosphorus and carbon in growing pigs fed regional diets

    DEFF Research Database (Denmark)

    Jørgensen, Henry; Poulsen, Hanne Damgaard; Prapaspongsa, Trakarn

    2013-01-01

    used in a digestibility and balance experiment. Excretion of dry matter (DM), nitrogen (N), phosphorus (P) and carbon (C) of the experimental diets were determined. Due to the highest dietary fibre content, VN had the lowest digestibility of N, P and C (73, 49, and 73%, respectively) compared......Modern pig production contributes to many environmental problems that relate to manure, especially in areas with highly intensive production systems and in regions like Asia where the regulative control is not effective. Therefore, the objective of this study was to use three different pig diets...... varying in dietary protein, fibre and fat as representative for Danish (DK), Thai (TH) and Vietnamese (VN) pig production to develop and evaluate different approaches to predict/calculate excretion from growing pigs in comparison with the experimentally determined values. Nine female growing pigs were...

  17. MULCHING MATERIALS OF PLANT ORIGIN AT POTATO GROWING IN ASTRAKHAN REGION

    Directory of Open Access Journals (Sweden)

    S. B. Bairambekov

    2016-01-01

    Full Text Available The application of phytogenous mulching materials based on local processed raw materials at potato cultivation in irrigated conditions of the Astrakhan region has allowed optimization of temperature and moisture regime of the soil. It was found that in case of the spring term of planting, the mulching has increased the soil temperature up to 0,6-0,9°C on April-May at a depth of 0,10 m as compared to the control. During heat period, mulching materials have decreased the soil temperature. Antecedent soil water under mulching materials in the phase of tubers formation was on 1,15-1,19 times higher than in the control variant without mulching. The most effective materials for the soils of different grain-size distribution were determined: for the heavy-loamy soil the best mulching material was straw, for the sandy loam soil the more efficient mulching was saw-dust.

  18. Floristic diversity of the soil weed seed bank in a rice-growing area of Brazil: in situ and ex situ evaluation

    Directory of Open Access Journals (Sweden)

    Mário Luiz Ribeiro Mesquita

    2013-09-01

    Full Text Available The objective of this study was to compare the ex situ and in situ floristic diversity of the soil weed seed bank of a rice field in northeastern Brazil. In a rice field in the county of Bacabal, located in the state of Maranhão, thirty 25-m² plots were laid out. From 15 plots, soil samples (6/plot; n = 90 were taken with a soil probe (25 × 16 × 3 cm and placed in aluminum trays in the greenhouse. From the remaining 15 plots, weed samples (6/plot; n = 90 were taken with the same soil probe. The number of seeds was estimated by germination. We evaluated the numbers of species and individuals, as well as the density, frequency, abundance and importance value (IV for each species. Diversity was computed by the Shannon index (H'. We recorded 13,892 individuals (among 20 families, 40 genera and 60 species, of which 11,530 (among 50 species germinated ex situ and 2,362 (among 34 species germinated in situ. The family Cyperaceae had the highest number of species (16, followed by Poaceae (10. The dominant species, in situ and ex situ, were Schoenoplectus juncoides (IV=47.4% and Ludwigia octovalvis (IV=34.8%, respectively. Floristic diversity was higher ex situ (H'=2.66. The information obtained here could help determine the infestation potential of these species, which could lead to improved management strategies.

  19. Enhanced Salt Tolerance Conferred by the Complete 2.3 kb cDNA of the Rice Vacuolar Na(+)/H(+) Antiporter Gene Compared to 1.9 kb Coding Region with 5' UTR in Transgenic Lines of Rice.

    Science.gov (United States)

    Amin, U S M; Biswas, Sudip; Elias, Sabrina M; Razzaque, Samsad; Haque, Taslima; Malo, Richard; Seraj, Zeba I

    2016-01-01

    Soil salinity is one of the most challenging problems that restricts the normal growth and production of rice worldwide. It has therefore become very important to produce more saline tolerant rice varieties. This study shows constitutive over-expression of the vacuolar Na(+)/H(+) antiporter gene (OsNHX1) from the rice landrace (Pokkali) and attainment of enhanced level of salinity tolerance in transgenic rice plants. It also shows that inclusion of the complete un-translated regions (UTRs) of the alternatively spliced OsNHX1 gene provides a higher level of tolerance to the transgenic rice. Two separate transformation events of the OsNHX1 gene, one with 1.9 kb region containing the 5' UTR with CDS and the other of 2.3 kb, including 5' UTR, CDS, and the 3' UTR regions were performed. The transgenic plants with these two different constructs were advanced to the T3 generation and physiological and molecular screening of homozygous plants was conducted at seedling and reproductive stages under salinity (NaCl) stress. Both transgenic lines were observed to be tolerant compared to WT plants at both physiological stages. However, the transgenic lines containing the CDS with both the 5' and 3' UTR were significantly more tolerant compared to the transgenic lines containing OsNHX1 gene without the 3' UTR. At the seedling stage at 12 dS/m stress, the chlorophyll content was significantly higher (P kb > 1.9 kb > and WT lines. Yield in g/plant in the best line from the 2.3 kb plants was significantly more (P kb line and WT plants at stress of 6 dS/m. Transformation with the complete transcripts rather than the CDS may therefore provide more durable level of tolerance.

  20. Evaluation of Red Raspberry Cultivars Used for Breeding and Commercial Growing in the Baltic Region

    Directory of Open Access Journals (Sweden)

    Lācis Gunārs

    2017-06-01

    Full Text Available The structure of raspberry cultivars and genetic resources in the Baltic countries have been influenced by the historical political situation in the 20th century and climatic conditions, especially winterhardiness. The genetic resources consist of some old European and American cultivars, but mostly of cultivars and hybrids bred in Russia. Currently, targeted breeding programmes are active only in Estonia and Latvia, which aim to develop winterhardy, disease-resistant cultivars, well adapted to the local climate. Therefore, parent material for hybridisation has been chosen from local advanced hybrids and introduced cultivars suitable to the regional climatic conditions. The aim of the study was to estimate the level of genetic diversity of Rubus germplasm and assess inter-specific and intra-specific relationships using phenotypical characterisation and molecular markers. Forty one Rubus genotypes were evaluated by 41 phenotypical traits and 15 previously described SSR markers. Both characterisation approaches discovered high correspondence with pedigree and a low level of diversity. A limited amount of the diversity of raspberry genetic material has been used in various breeding programmes, despite their broad geographical origin. The obtained results indicate the need for including local wild R. idaeus plant material into breeding programmes.

  1. [Impacts of climate warming on growth period and yield of rice in Northeast China during recent two decades].

    Science.gov (United States)

    Hou, Wen-jia; Geng, Ting; Chen, Qun; Chen, Chang-qing

    2015-01-01

    By using rice growth period, yield and climate observation data during the recent two decades, the impact of climate warming on rice in Northeast China was investigated by mathematical statistics methods. The results indicated that in the three provinces of Northeast China, the average, maximum and minimum temperatures in rice growing season were on the. rise, and the rainfall presented a downward trend during 1989-2009. Compared to 1990s, the rice whole growth periods of Heilongjiang, Jilin and Liaoning provinces in 2000s were prolonged 14 d, 4.5 d and 5.1 d, respectively. The increase of temperature in May, June and September could extend the rice growth period, while that in July would shorten the growth duration. The rice growth duration of registered varieties and experiment sites had a similar increasing trend in Northeast China except for the Heilongjiang Province, and the extension of registered varieties growth period was the main factor causing the prolonged growth period of rice at experiment sites. The change in daily average, minimum and maximum temperatures all could affect the rice yield in Northeast China. The increasing temperature significantly increased the rice yield in Heilongjiang Province, especially in the west region of Sanjiang Plain. Except for the south of Liaoning Province, rice yields in other regions of Northeast China were promoted by increasing temperature. Proper measures for breeding, cultivation and farming, could be adopted to fully improve the adaptation of rice to climate warming in Northeast China.

  2. Climate change and prolongation of growing season: changes in regional potential for field crop production in Finland

    Directory of Open Access Journals (Sweden)

    P. PELTONEN-SAINIO

    2008-12-01

    Full Text Available Climate change offers new opportunities for Finnish field crop production, which is currently limited by the short growing season. A warmer climate will extend the thermal growing season and the physiologically effective part of it. Winters will also become milder, enabling introduction of winter-sown crops to a greater extent than is possible today. With this study we aim to characterise the likely regional differences in capacity to grow different seed producing crops. Prolongation of the Finnish growing season was estimated using a 0.5º latitude × 0.5º longitude gridded dataset from the Finnish Meteorological Institute. The dataset comprised an average estimate from 19 global climate models of the response of Finnish climate to low (B1 and high (A2 scenarios of greenhouse gas and aerosol emissions for 30-year periods centred on 2025, 2055 and 2085 (Intergovernmental Panel on Climate Change. Growing season temperature sums that suit crop growth and are agronomically feasible in Finland are anticipated to increase by some 140 °Cd by 2025, 300 °Cd by 2055 and 470 °Cd by 2085 in scenario A2, when averaged over regions, and earlier sowing is expected to take place, but not later harvests. Accordingly, the extent of cultivable areas for the commonly grown major and minor crops will increase considerably. Due to the higher base temperature requirement for maize (Zea mays L. growth than for temperate crops, we estimate that silage maize could become a Finnish field crop for the most favourable growing regions only at the end of this century. Winters are getting milder, but it will take almost the whole century until winters such as those that are typical for southern Sweden and Denmark are experienced on a wide scale in Finland. It is possible that introduction of winter-sown crops (cereals and rapeseed will represent major risks due to fluctuating winter conditions, and this could delay their adaptation for many decades. Such risks need to be

  3. Uptake of uranium, thorium and radium isotopes by plants growing in dam impoundment Tasotkel and the Lower Shu region (Kazakhstan)

    Energy Technology Data Exchange (ETDEWEB)

    Matveyeva, Ilona; Burkitbayev, Mukhambetkali [al-Farabi Kazakh National University, Almaty (Kazakhstan). Faculty of Chemistry and Chemical Technology; Jacimovic, Radojko [Jozef Stefan Institute, Ljubljana (Slovenia). Dept. of Environmental Sciences; Planinsek, Petra; Smodis, Borut [Jozef Stefan Institute, Ljubljana (Slovenia). Dept. of Environmental Sciences; Jozef Stefan International Postgraduate School, Ljubljana (Slovenia)

    2016-04-01

    The activity concentrations of isotopes of uranium, thorium and radium-226 in dominant species of plants (Xantium strumarium, Phragmites communis, Artemisia nitrosa and Artemisia serotina) growing on the territories contaminated by uranium industry of Kazakhstan (close to dam impoundment Tasotkel and the Lower Shu region) are presented. The obtained data showed the significant variations of activity concentrations of isotopes of uranium, thorium and radium-226 in above ground parts. The concentrations of most of the investigated radionuclides in the root system are higher than in the aboveground parts; it can be explained by root barrier. It was found that the highest root barrier has Xantium strumarium, especially for uranium isotopes. The concentration ratios of radionuclides were calculated, and as the result it was found that the highest accumulation ability in the investigated region has Artemisia serotina.

  4. Uptake of uranium, thorium and radium isotopes by plants growing in dam impoundment Tasotkel and the Lower Shu region (Kazakhstan)

    International Nuclear Information System (INIS)

    Matveyeva, Ilona; Burkitbayev, Mukhambetkali

    2016-01-01

    The activity concentrations of isotopes of uranium, thorium and radium-226 in dominant species of plants (Xantium strumarium, Phragmites communis, Artemisia nitrosa and Artemisia serotina) growing on the territories contaminated by uranium industry of Kazakhstan (close to dam impoundment Tasotkel and the Lower Shu region) are presented. The obtained data showed the significant variations of activity concentrations of isotopes of uranium, thorium and radium-226 in above ground parts. The concentrations of most of the investigated radionuclides in the root system are higher than in the aboveground parts; it can be explained by root barrier. It was found that the highest root barrier has Xantium strumarium, especially for uranium isotopes. The concentration ratios of radionuclides were calculated, and as the result it was found that the highest accumulation ability in the investigated region has Artemisia serotina.

  5. Rice Production Vulnerability to Climate Change in Indonesia: An Overview on Community-based Adaptation

    Science.gov (United States)

    Komaladara, A. A. S. P.; Budiasa, I. W.; Ambarawati, I. G. A. A.

    2015-12-01

    Rice remains to be a major crop and staple food in Indonesia. The task to ensure that rice production meets the demand of a growing population continues to engage the attention of national planners and policy makers. However, the adverse effects of climate change on agriculture production have presented Indonesia with yet another significant challenge. The exposure of rice crops to climate-related hazards such as temperature stress, floods, and drought, may lead to lower yield and self-sufficiency rate. This study explores the vulnerability of rice production to the effects of climate change in Indonesia. Considering the vast geographical span of the country and varying exposure, sensitivity, and adaptive capacity to climate change at regional level, this study emphasize the importance of community-based adaptation. Results from a simulation based on production and climate data from 1984 to 2014 indicates that rice production is sensitive to variation in growing season temperature and precipitation. A projection of these climate factors in 2050 has a significant impact on the major rice crop. To manage the impact of climate change, this study turns to the potential roles of farmer organizations, such as Subak, in adaptation strategies. The Subak in Bali is recognized for its cultural and organizational framework that highlights the sharing of knowledge and local wisdom in rice production. This is demonstrated by its efficient community-based irrigation management system, leading to sustainable rice production. Keywords: rice production, climate change, community-based adaptation, Indonesia

  6. Genetic interactions between diverged alleles of Early heading date 1 (Ehd1) and Heading date 3a (Hd3a)/ RICE FLOWERING LOCUS T1 (RFT1) control differential heading and contribute to regional adaptation in rice (Oryza sativa).

    Science.gov (United States)

    Zhao, Jing; Chen, Hongyi; Ren, Ding; Tang, Huiwu; Qiu, Rong; Feng, Jinglei; Long, Yunming; Niu, Baixiao; Chen, Danping; Zhong, Tianyu; Liu, Yao-Guang; Guo, Jingxin

    2015-11-01

    Initiation of flowering, also called heading, in rice (Oryza sativa) is determined by the florigens encoded by Heading date 3a (Hd3a) and RICE FLOWERING LOCUS T1 (RFT1). Early heading date 1 (Ehd1) regulates Hd3a and RFT1. However, different rice varieties have diverged alleles of Ehd1 and Hd3a/RFT1 and their genetic interactions remain largely unclear. Here we generated three segregating populations for different combinations of diverged Ehd1 and Hd3a/RFT1 alleles, and analyzed their genetic interactions between these alleles. We demonstrated that, in an ehd1 mutant background, Hd3a was silenced, but RFT1 was expressed (although at lower levels than in plants with a functional Ehd1) under short-day (SD) and long-day (LD) conditions. We identified a nonfunctional RFT1 allele (rft1); the lines carrying homozygous ehd1 and Hd3a/rft1 failed to induce the floral transition under SD and LD conditions. Like Hd3a, RFT1 also interacted with 14-3-3 proteins, the florigen receptors, but a nonfunctional RFT1 with a crucial E105K mutation failed to interact with 14-3-3 proteins. Furthermore, analyses of sequence variation and geographic distribution suggested that functional RFT1 alleles were selected during rice adaptation to high-latitude regions. Our results demonstrate the important roles of RFT1 in rice flowering and regional adaptation. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  7. Development of an ideal plant type and male sterility system in sesame suitable for summer rice fallow in the coastal regions of Tamil Nadu

    International Nuclear Information System (INIS)

    Ganesan, J.

    2001-01-01

    In Tamil Nadu, sesame growing on available residual soil moisture after the rice harvest is expanding. In order to achieve higher and more reliable yields under these conditions, a more suitable plant type is needed: with shorter stature and growing period, moderate basal branching and higher productivity. Seeds of 6 varieties were treated with gamma rays, diethyl sulphate (DES) and ethyl methane sulphonate (EMS). The M 1 -M 4 generations were studied and several promising mutants were selected. Among them were also male sterile mutants; it is thought that such mutants will assist in producing hybrid varieties which will give the desired yield breakthrough. (author)

  8. Gibberellin-regulated gene in the basal region of rice leaf sheath encodes basic helix-loop-helix transcription factor.

    Science.gov (United States)

    Komatsu, Setsuko; Takasaki, Hironori

    2009-07-01

    Genes regulated by gibberellin (GA) during leaf sheath elongation in rice seedlings were identified using the transcriptome approach. mRNA from the basal regions of leaf sheaths treated with GA3 was analyzed by high-coverage gene expression profiling. 33,004 peaks were detected, and 30 transcripts showed significant changes in the presence of GA3. Among these, basic helix-loop-helix transcription factor (AK073385) was significantly upregulated. Quantitative PCR analysis confirmed that expression of AK073385 was controlled by GA3 in a time- and dose-dependent manner. Basic helix-loop-helix transcription factor (AK073385) is therefore involved in the regulation of gene expression by GA3.

  9. Mapping rice areas of South Asia using MODIS multitemporal data

    Science.gov (United States)

    Gumma, Murali Krishna; Nelson, Andrew; Thenkabail, Prasad S.; Singh, Amrendra N.

    2011-01-01

    Our goal is to map the rice areas of six South Asian countries using moderate-resolution imaging spectroradiometer (MODIS) time-series data for the time period 2000 to 2001. South Asia accounts for almost 40% of the world's harvested rice area and is also home to 74% of the population that lives on less than $2.00 a day. The population of the region is growing faster than its ability to produce rice. Thus, accurate and timely assessment of where and how rice is cultivated is important to craft food security and poverty alleviation strategies. We used a time series of eight-day, 500-m spatial resolution composite images from the MODIS sensor to produce rice maps and rice characteristics (e.g., intensity of cropping, cropping calendar) taking data for the years 2000 to 2001 and by adopting a suite of methods that include spectral matching techniques, decision trees, and ideal temporal profile data banks to rapidly identify and classify rice areas over large spatial extents. These methods are used in conjunction with ancillary spatial data sets (e.g., elevation, precipitation), national statistics, and maps, and a large volume of field-plot data. The resulting rice maps and statistics are compared against a subset of independent field-plot points and the best available subnational statistics on rice areas for the main crop growing season (kharif season). A fuzzy classification accuracy assessment for the 2000 to 2001 rice-map product, based on field-plot data, demonstrated accuracies from 67% to 100% for individual rice classes, with an overall accuracy of 80% for all classes. Most of the mixing was within rice classes. The derived physical rice area was highly correlated with the subnational statistics with R2 values of 97% at the district level and 99% at the state level for 2000 to 2001. These results suggest that the methods, approaches, algorithms, and data sets we used are ideal for rapid, accurate, and large-scale mapping of paddy rice as well as for generating

  10. Mapping rice areas of South Asia using MODIS multitemporal data

    Science.gov (United States)

    Gumma, M.K.; Nelson, A.; Thenkabail, P.S.; Singh, A.N.

    2011-01-01

    Our goal is to map the rice areas of six South Asian countries using moderate-resolution imaging spectroradiometer (MODIS) time-series data for the time period 2000 to 2001. South Asia accounts for almost 40% of the world's harvested rice area and is also home to 74% of the population that lives on less than $2.00 a day. The population of the region is growing faster than its ability to produce rice. Thus, accurate and timely assessment of where and how rice is cultivated is important to craft food security and poverty alleviation strategies. We used a time series of eight-day, 500-m spatial resolution composite images from the MODIS sensor to produce rice maps and rice characteristics (e.g., intensity of cropping, cropping calendar) taking data for the years 2000 to 2001 and by adopting a suite of methods that include spectral matching techniques, decision trees, and ideal temporal profile data banks to rapidly identify and classify rice areas over large spatial extents. These methods are used in conjunction with ancillary spatial data sets (e.g., elevation, precipitation), national statistics, and maps, and a large volume of field-plot data. The resulting rice maps and statistics are compared against a subset of independent field-plot points and the best available subnational statistics on rice areas for the main crop growing season (kharif season). A fuzzy classification accuracy assessment for the 2000 to 2001 rice-map product, based on field-plot data, demonstrated accuracies from 67% to 100% for individual rice classes, with an overall accuracy of 80% for all classes. Most of the mixing was within rice classes. The derived physical rice area was highly correlated with the subnational statistics with R2 values of 97% at the district level and 99% at the state level for 2000 to 2001. These results suggest that the methods, approaches, algorithms, and data sets we used are ideal for rapid, accurate, and large-scale mapping of paddy rice as well as for generating

  11. INNOVATIVE TECHNOLOGIES FOR SOIL PROCESSING AND EFFICIENCY OF THEIR APPLICATION IN THE GROWING OF GRAIN CULTURES IN CHERKASY REGION

    Directory of Open Access Journals (Sweden)

    Ulanchuk V.

    2018-01-01

    Full Text Available Introduction. Scientific and technological progress plays an important role in improving the efficiency of the production of grain products. At the same time, it also has a negative impact on the ecology of soils. World experience shows the possibility of suspending and overcoming destructive land processes by introducing innovative soil cultivation technologies in the cultivation of agricultural crops. Purpose. This article aims to substantiate expediency of introduction of innovative resource-saving technologies of soil cultivation at cultivation of grain crops in Cherkasy region. Results. In the article it is proved that the efficiency of grain production in agricultural enterprises of Cherkasy region, which are using minimal (Mini-till and zero (No-till tillage technologies, in comparison with enterprises that use traditional grain growing technology, have indicators, as the price of sale of 1 centner of grain, the profit per 1 centner of grain and the level of profitability, that are much higher. Thus, the price of 1 centner of grain produced by the “LNZ-Agro” (Mini-till in 2013-2015 was higher 573.86 UAH, at the “Shpola-Agro-Industry” (No-till at 390,94 UAH, profit per 1 centner grain is higher than 477.23 and 249.14 UAH; the level of profitability of grain – higher than 201.5 and 71.8 percentage points. A similar situation is observed in the production of the main grain crops (wheat and maize for grain. With the application of the newest soil cultivation technologies, there is a decrease in the calculation of fuel consumption and depreciation deductions per hectare. The expediency of using resource-saving technologies for soil tillage during the cultivation of grain products in agricultural enterprises of the Cherkasy region also indicates by such indicator as the amount of profit per 1 hectare of crops. So, LNZ-Agro (Mini-till for one hectare of crops received a profit of 43947 UAH, “Shpola-Agro-Industry” (No-till –16491

  12. Effect of Cadmium, Copper and Lead on the Growth of Rice in the Coal Mining Region of Quang Ninh, Cam-Pha (Vietnam

    Directory of Open Access Journals (Sweden)

    J. Eduardo Marquez

    2018-05-01

    Full Text Available The goal of this study was to quantify the mobility and partitioning of trace elements originating from mine waste rocks derived from open pit coal extraction activities. The results showed that native rice plants were adapted to growing in metal contaminated soils, posing a severe health risk to local population. Sequential extraction procedures and bulk soil chemical analyses both suggest enrichment of Cd, Pb and Cu in rice paddy soils. Lead was shown to be evenly partitioned among all mineral and organic phases. Copper was associated with carbonates and organic matter. Smaller fractions of Pb and Cu were also bound to Fe and Mn oxides. Only 25% of Cd, 9% of Pb and 48% of Cu were associated with the exchangeable fraction, considered mobile and thus bioavailable for plant uptake. Effects of Cd, Cu and Pb on local Cam Pha Nep cai Hoa vang, and control Asia Italian rice, showed marked differences in growth. The local Vietnamese variety grew close to control values, even upon exposure to higher trace metal concentrations. Whereas the development of the control rice species was significantly affected by increasing trace metal concentrations. This result suggests toxic trace elements accumulation in the edible parts of crops.

  13. Mapping growing stock volume and forest live biomass: a case study of the Polissya region of Ukraine

    Science.gov (United States)

    Bilous, Andrii; Myroniuk, Viktor; Holiaka, Dmytrii; Bilous, Svitlana; See, Linda; Schepaschenko, Dmitry

    2017-10-01

    Forest inventory and biomass mapping are important tasks that require inputs from multiple data sources. In this paper we implement two methods for the Ukrainian region of Polissya: random forest (RF) for tree species prediction and k-nearest neighbors (k-NN) for growing stock volume and biomass mapping. We examined the suitability of the five-band RapidEye satellite image to predict the distribution of six tree species. The accuracy of RF is quite high: ~99% for forest/non-forest mask and 89% for tree species prediction. Our results demonstrate that inclusion of elevation as a predictor variable in the RF model improved the performance of tree species classification. We evaluated different distance metrics for the k-NN method, including Euclidean or Mahalanobis distance, most similar neighbor (MSN), gradient nearest neighbor, and independent component analysis. The MSN with the four nearest neighbors (k = 4) is the most precise (according to the root-mean-square deviation) for predicting forest attributes across the study area. The k-NN method allowed us to estimate growing stock volume with an accuracy of 3 m3 ha-1 and for live biomass of about 2 t ha-1 over the study area.

  14. Comparison of Insecticide Susceptibilities of Empoasca vitis (Hemiptera: Cicadellidae) from Three Main Tea-Growing Regions in China.

    Science.gov (United States)

    Wei, Qi; Yu, Hua-Yang; Niu, Chun-Dong; Yao, Rong; Wu, Shun-Fan; Chen, Zhuo; Gao, Cong-Fen

    2015-06-01

    Empoasca vitis (Göthe) is an important insect pest in tea-growing areas of China, and chemical control is the main tactic for the management of this pest. Due to the pressure of increasing insecticide resistance and more stringent food safety regulations, development of sound IPM strategies for E. vitis is an urgent matter. This study comparatively evaluated four field populations of E. vitis from three different tea-growing regions in China for their susceptibilities to eight insecticides using a simple leaf-dip methodology. E. vitis was found to be most sensitive to indoxacarb (LC505 mg/liter) and sophocarpidine (LC50>95 mg/liter, a botanical pesticide) regardless of populations. Population (geographical) variations were higher for indoxacarb and imidacloprid than other compounds. Judging by the 95% fiducial limits of LC50 values, all populations had similar susceptibilities to chlorfenapyr, bifenthrin, and acetamiprid or imidacloprid. Correlation analysis suggested that chlorfenapyr and indoxacarb or isoprocarb may have a high risk of cross resistance. Considering potency (LC50) and maximum residual levels, chlorfenapyr and bifenthrin are good insecticide options followed by acetamiprid and indoxacarb. These results provide valuable information to intelligently select insecticides for IPM programs that are efficacious against E. vitis while also managing insecticide resistance and maximum residual levels for tea production in China. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  15. Heavy metal accumulation in leaves and beans of cacao (Theobroma cacao L.) in major cacao growing regions in Peru.

    Science.gov (United States)

    Arévalo-Gardini, Enrique; Arévalo-Hernández, Cesar O; Baligar, Virupax C; He, Zhenli L

    2017-12-15

    Peru is one of the leading exporters of organic cacao beans in the world. However, the accumulation of heavy metals in cacao beans represents a problem for cocoa bean export and chocolate quality. The aim of this study was to investigate the distribution and accumulation of heavy metals in cacao leaves and cocoa beans in three major cacao growing regions of Peru. The study was conducted in cacao plantations of 10 to 15years old in three regions of Peru: North (Regions of Tumbes, Piura, Cajamarca, and Amazonas); Center (Regions of Huánuco and San Martin) and South (Junin and Cuzco). Samples of leaf and cacao beans were collected from 70 cacao plantations, and the nature of cacao clone or genotype sampled was recorded. The concentrations of heavy metals such as Cd, Cr, Cu, Fe, Mn, Ni, Pb and Zn in leaves and beans were determined using atomic absorption spectrophotometer. Overall, concentrations of heavy metals were below the critical limits; however, the presence of high levels of Cd in cacao grown in Amazonas, Piura, and Tumbes regions is of primary concern. Plantations of cacao with different cacao clones show differences in Cd accumulation both in leaves and cocoa beans. Therefore, it is promising to screen low Cd accumulator cacao genotypes for safe production of cacao on lightly to moderately Cd contaminated soils. Also, synergism between Zn and Cd present both in plant and soil suggests that Zn has a direct effect on Cd accumulation in cacao. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Automated grain extraction and classification by combining improved region growing segmentation and shape descriptors in electromagnetic mill classification system

    Science.gov (United States)

    Budzan, Sebastian

    2018-04-01

    In this paper, the automatic method of grain detection and classification has been presented. As input, it uses a single digital image obtained from milling process of the copper ore with an high-quality digital camera. The grinding process is an extremely energy and cost consuming process, thus granularity evaluation process should be performed with high efficiency and time consumption. The method proposed in this paper is based on the three-stage image processing. First, using Seeded Region Growing (SRG) segmentation with proposed adaptive thresholding based on the calculation of Relative Standard Deviation (RSD) all grains are detected. In the next step results of the detection are improved using information about the shape of the detected grains using distance map. Finally, each grain in the sample is classified into one of the predefined granularity class. The quality of the proposed method has been obtained by using nominal granularity samples, also with a comparison to the other methods.

  17. A segment of the apospory-specific genomic region is highly microsyntenic not only between the apomicts Pennisetum squamulatum and buffelgrass, but also with a rice chromosome 11 centromeric-proximal genomic region.

    Science.gov (United States)

    Gualtieri, Gustavo; Conner, Joann A; Morishige, Daryl T; Moore, L David; Mullet, John E; Ozias-Akins, Peggy

    2006-03-01

    Bacterial artificial chromosome (BAC) clones from apomicts Pennisetum squamulatum and buffelgrass (Cenchrus ciliaris), isolated with the apospory-specific genomic region (ASGR) marker ugt197, were assembled into contigs that were extended by chromosome walking. Gene-like sequences from contigs were identified by shotgun sequencing and BLAST searches, and used to isolate orthologous rice contigs. Additional gene-like sequences in the apomicts' contigs were identified by bioinformatics using fully sequenced BACs from orthologous rice contigs as templates, as well as by interspecies, whole-contig cross-hybridizations. Hierarchical contig orthology was rapidly assessed by constructing detailed long-range contig molecular maps showing the distribution of gene-like sequences and markers, and searching for microsyntenic patterns of sequence identity and spatial distribution within and across species contigs. We found microsynteny between P. squamulatum and buffelgrass contigs. Importantly, this approach also enabled us to isolate from within the rice (Oryza sativa) genome contig Rice A, which shows the highest microsynteny and is most orthologous to the ugt197-containing C1C buffelgrass contig. Contig Rice A belongs to the rice genome database contig 77 (according to the current September 12, 2003, rice fingerprint contig build) that maps proximal to the chromosome 11 centromere, a feature that interestingly correlates with the mapping of ASGR-linked BACs proximal to the centromere or centromere-like sequences. Thus, relatedness between these two orthologous contigs is supported both by their molecular microstructure and by their centromeric-proximal location. Our discoveries promote the use of a microsynteny-based positional-cloning approach using the rice genome as a template to aid in constructing the ASGR toward the isolation of genes underlying apospory.

  18. A Segment of the Apospory-Specific Genomic Region Is Highly Microsyntenic Not Only between the Apomicts Pennisetum squamulatum and Buffelgrass, But Also with a Rice Chromosome 11 Centromeric-Proximal Genomic Region1[W

    Science.gov (United States)

    Gualtieri, Gustavo; Conner, Joann A.; Morishige, Daryl T.; Moore, L. David; Mullet, John E.; Ozias-Akins, Peggy

    2006-01-01

    Bacterial artificial chromosome (BAC) clones from apomicts Pennisetum squamulatum and buffelgrass (Cenchrus ciliaris), isolated with the apospory-specific genomic region (ASGR) marker ugt197, were assembled into contigs that were extended by chromosome walking. Gene-like sequences from contigs were identified by shotgun sequencing and BLAST searches, and used to isolate orthologous rice contigs. Additional gene-like sequences in the apomicts' contigs were identified by bioinformatics using fully sequenced BACs from orthologous rice contigs as templates, as well as by interspecies, whole-contig cross-hybridizations. Hierarchical contig orthology was rapidly assessed by constructing detailed long-range contig molecular maps showing the distribution of gene-like sequences and markers, and searching for microsyntenic patterns of sequence identity and spatial distribution within and across species contigs. We found microsynteny between P. squamulatum and buffelgrass contigs. Importantly, this approach also enabled us to isolate from within the rice (Oryza sativa) genome contig Rice A, which shows the highest microsynteny and is most orthologous to the ugt197-containing C1C buffelgrass contig. Contig Rice A belongs to the rice genome database contig 77 (according to the current September 12, 2003, rice fingerprint contig build) that maps proximal to the chromosome 11 centromere, a feature that interestingly correlates with the mapping of ASGR-linked BACs proximal to the centromere or centromere-like sequences. Thus, relatedness between these two orthologous contigs is supported both by their molecular microstructure and by their centromeric-proximal location. Our discoveries promote the use of a microsynteny-based positional-cloning approach using the rice genome as a template to aid in constructing the ASGR toward the isolation of genes underlying apospory. PMID:16415213

  19. Grow, Baby, Grow

    Science.gov (United States)

    Maybe you quit smoking during your pregnancy. Or maybe you struggled and weren’t able to stay quit. Now that your baby is here, trying to stay away from smoking is still important. That’s because the chemicals in smoke can make it harder for your baby to grow like he or she should.

  20. Chemical diversity of essential oils from flowers, leaves, and stems of Rhanterium epapposum Oliv. growing in northern border region of Saudi Arabia

    Directory of Open Access Journals (Sweden)

    Marwa Awad

    2016-09-01

    Conclusions: Essential oils from flowers, leaves and stems of R. epapposum growing in northern border region of Saudi Arabia are considered as a rich source of monoterpenes which have biological activities.

  1. Intraspecific responses of 188 rice cultivars to enhanced UVB radiation

    International Nuclear Information System (INIS)

    Dai, Q.; Peng, A.; Chavez, A.Q.; Vergara, B.S.

    1994-01-01

    Phytotron studies were conducted to determine the intraspecific variation in sensitivity of rice (Oryza sativa L.) to enhanced UVB and to test the hypothesis that rice cultivars originating from regions with higher ambient UVB radiation are more tolerant to enhanced UVB. Out of the 188 rice cultivars (from various rice growing regions and ecosystems) tested, 143 had significantly reduced plant height, 52 had smaller leaf area, 61 had lower plant dry weight and 41 had less tiller number under elevated UVB radiation (13.0 kJ m −2 day −1 ) for 3 weeks. Six cultivars showed significant positive growth response to enhanced UVB radiation, although the mechanism is not clear at present. These six cultivars were from the summer rice crop of Bangladesh and from high elevation rice areas where prevailing UVB radiation is most likely to be greater. However, there was no correlation between the dry matter changes under enhanced UVB and the ambient UVB level at the origin of the cultivar across the 188 cultivars tested. Therefore, cultivars originating from regions with higher ambient UVB are not necessarily more tolerant to enhanced UVB radiation. (author)

  2. Adaptive region-growing with maximum curvature strategy for tumor segmentation in 18F-FDG PET

    Science.gov (United States)

    Tan, Shan; Li, Laquan; Choi, Wookjin; Kang, Min Kyu; D'Souza, Warren D.; Lu, Wei

    2017-07-01

    Accurate tumor segmentation in PET is crucial in many oncology applications. We developed an adaptive region-growing (ARG) algorithm with a maximum curvature strategy (ARG_MC) for tumor segmentation in PET. The ARG_MC repeatedly applied a confidence connected region-growing algorithm with increasing relaxing factor f. The optimal relaxing factor (ORF) was then determined at the transition point on the f-volume curve, where the volume just grew from the tumor into the surrounding normal tissues. The ARG_MC along with five widely used algorithms were tested on a phantom with 6 spheres at different signal to background ratios and on two clinic datasets including 20 patients with esophageal cancer and 11 patients with non-Hodgkin lymphoma (NHL). The ARG_MC did not require any phantom calibration or any a priori knowledge of the tumor or PET scanner. The identified ORF varied with tumor types (mean ORF  =  9.61, 3.78 and 2.55 respectively for the phantom, esophageal cancer, and NHL datasets), and varied from one tumor to another. For the phantom, the ARG_MC ranked the second in segmentation accuracy with an average Dice similarity index (DSI) of 0.86, only slightly worse than Daisne’s adaptive thresholding method (DSI  =  0.87), which required phantom calibration. For both the esophageal cancer dataset and the NHL dataset, the ARG_MC had the highest accuracy with an average DSI of 0.87 and 0.84, respectively. The ARG_MC was robust to parameter settings and region of interest selection, and it did not depend on scanners, imaging protocols, or tumor types. Furthermore, the ARG_MC made no assumption about the tumor size or tumor uptake distribution, making it suitable for segmenting tumors with heterogeneous FDG uptake. In conclusion, the ARG_MC was accurate, robust and easy to use, it provides a highly potential tool for PET tumor segmentation in clinic.

  3. Using ORYZA2000 to model cold rice yield response to climate change in the Heilongjiang province, China

    Directory of Open Access Journals (Sweden)

    Jingting Zhang

    2015-08-01

    Full Text Available Rice (Oryza sativa L. is one of the most important staple crops in China. Increasing atmospheric greenhouse gas concentrations and associated climate change may greatly affect rice production. We assessed the potential impacts of climate change on cold rice production in the Heilongjiang province, one of China's most important rice production regions. Data for a baseline period (1961–1990 and the period 2010–2050 in A2 and B2 scenarios were used as input to drive the rice model ORYZA2000 with and without accounting for the effects of increasing atmospheric CO2 concentration. The results indicate that mean, maximum, and minimum temperature during the rice growing season, in the future period considered, would increase by 1.8 °C under the A2 scenario and by 2.2 °C under the B2 scenario compared with those in the baseline. The rate of change in average maximum and minimum temperatures would increase by 0.6 °C per 10-year period under the A2 scenario and by 0.4 °C per 10-year period under the B2 scenario. Precipitation would increase slightly in the rice growing season over the next 40 years. The rice growing season would be shortened and the yield would increase in most areas in the Heilongjiang province. Without accounting for CO2 effect, the rice growing season in the period 2010–2050 would be shortened by 4.7 and 5.8 days, and rice yields would increase by 11.9% and 7.9%, under the A2 and B2 scenarios, respectively. Areas with simulated rice yield increases greater than 30.0% were in the Xiaoxing'an Mountain region. The simulation indicated a decrease in yield of less than 15% in the southwestern Songnen Plain. The rate of change in simulated rice yield was 5.0% and 2.5% per 10 years under the A2 and B2 scenarios, respectively. When CO2 effect was accounted for, rice yield increased by 44.5% and 31.3% under the A2 and B2 scenarios, respectively. The areas of increasing yield were sharply expanded. The area of decreasing yield in the

  4. Environmental Response and Genomic Regions Correlated with Rice Root Growth and Yield under Drought in the OryzaSNP Panel across Multiple Study Systems.

    Directory of Open Access Journals (Sweden)

    Len J Wade

    Full Text Available The rapid progress in rice genotyping must be matched by advances in phenotyping. A better understanding of genetic variation in rice for drought response, root traits, and practical methods for studying them are needed. In this study, the OryzaSNP set (20 diverse genotypes that have been genotyped for SNP markers was phenotyped in a range of field and container studies to study the diversity of rice root growth and response to drought. Of the root traits measured across more than 20 root experiments, root dry weight showed the most stable genotypic performance across studies. The environment (E component had the strongest effect on yield and root traits. We identified genomic regions correlated with root dry weight, percent deep roots, maximum root depth, and grain yield based on a correlation analysis with the phenotypes and aus, indica, or japonica introgression regions using the SNP data. Two genomic regions were identified as hot spots in which root traits and grain yield were co-located; on chromosome 1 (39.7-40.7 Mb and on chromosome 8 (20.3-21.9 Mb. Across experiments, the soil type/ growth medium showed more correlations with plant growth than the container dimensions. Although the correlations among studies and genetic co-location of root traits from a range of study systems points to their potential utility to represent responses in field studies, the best correlations were observed when the two setups had some similar properties. Due to the co-location of the identified genomic regions (from introgression block analysis with QTL for a number of previously reported root and drought traits, these regions are good candidates for detailed characterization to contribute to understanding rice improvement for response to drought. This study also highlights the utility of characterizing a small set of 20 genotypes for root growth, drought response, and related genomic regions.

  5. Effects of Low Light on Agronomic and Physiological Characteristics of Rice Including Grain Yield and Quality

    Directory of Open Access Journals (Sweden)

    Qi-hua LIU

    2014-09-01

    Full Text Available Light intensity is one of the most important environmental factors that determine the basic characteristics of rice development. However, continuously cloudy weather or rainfall, especially during the grain-filling stage, induces a significant loss in yield and results in poor grain quality. Stress caused by low light often creates severe meteorological disasters in some rice-growing regions worldwide. This review was based on our previous research and related research regarding the effects of low light on rice growth, yield and quality as well as the formation of grain, and mainly reviewed the physiological metabolism of rice plants, including characteristics of photosynthesis, activities of antioxidant enzymes in rice leaves and key enzymes involved in starch synthesis in grains, as well as the translocations of carbohydrate and nitrogen. These characteristics include various grain yield and rice quality components (milling and appearance as well as cooking, eating and nutritional qualities under different rates of shading imposed at the vegetative or reproductive stages of rice plants. Furthermore, we discussed why grain yield and quality are reduced under the low light environment. Next, we summarized the need for future research that emphasizes methods can effectively improve rice grain yield and quality under low light stress. These research findings can provide a beneficial reference for rice cultivation management and breeding program in low light environments.

  6. Rapid assessment of rice seed availability for wildlife in harvested fields

    Science.gov (United States)

    Halstead, B.J.; Miller, M.R.; Casazza, Michael L.; Coates, P.S.; Farinha, M.A.; Benjamin, Gustafson K.; Yee, J.L.; Fleskes, J.P.

    2011-01-01

    Rice seed remaining in commercial fields after harvest (waste rice) is a critical food resource for wintering waterfowl in rice-growing regions of North America. Accurate and precise estimates of the seed mass density of waste rice are essential for planning waterfowl wintering habitat extents and management. In the Sacramento Valley of California, USA, the existing method for obtaining estimates of availability of waste rice in harvested fields produces relatively precise estimates, but the labor-, time-, and machineryintensive process is not practical for routine assessments needed to examine long-term trends in waste rice availability. We tested several experimental methods designed to rapidly derive estimates that would not be burdened with disadvantages of the existing method. We first conducted a simulation study of the efficiency of each method and then conducted field tests. For each approach, methods did not vary in root mean squared error, although some methods did exhibit bias for both simulations and field tests. Methods also varied substantially in the time to conduct each sample and in the number of samples required to detect a standard trend. Overall, modified line-intercept methods performed well for estimating the density of rice seeds. Waste rice in the straw, although not measured directly, can be accounted for by a positive relationship with density of rice on the ground. Rapid assessment of food availability is a useful tool to help waterfowl managers establish and implement wetland restoration and agricultural habitat-enhancement goals for wintering waterfowl. ?? 2011 The Wildlife Society.

  7. A Molecular-Cytogenetic Method for Locating Genes to Pericentromeric Regions Facilitates a Genome-Wide Comparison of Syntency Between the Centrometric Regions of Wheat and Rice

    Science.gov (United States)

    Centromeres, because of their repeat structure and lack of sequence conservation, are difficult to assemble and compare across organisms. It was recently discovered that rice centromeres often contain genes. This suggested a method for studying centromere homologies between wheat and rice chromosome...

  8. Marketing Analysis Strategy Organic Rice at UD. Padi Marketing Region Bekasi with Single Agent (Yasin Holistic Super Organic

    Directory of Open Access Journals (Sweden)

    Euis Dasipah

    2014-06-01

    Full Text Available Organic food (organic rice actually is not something new for Indonesian people. Before "Green Revolution" (1960th, Indonesian farmers have produced rice without using chemical pest and fertilizer (conventional rice. Holistic Super Organic (HSO rice is one of the brand organic rice, which is sold in Indonesia's market. Usaha Dagang (U.D. Padi is the company, which is special to produce, and marketing HSO rice. The research is wanted to know marketing strategy HSO rice, especially in district of Bekasi with SWOT analysis. This research used case study methods with held by interview and literature study. The result of analyzing identified that the strengths from U.D. Padi was dominant and the opportunities so on. So, the next plan of marketing's strategy for is Aggressive Strategy. Aggressive Strategy is the effort to maximalize the strengths to get the opportunities optimally. The strengths of U.D. Padi is the especially of product and the distribution strategy which was held with excellent. The opportunities U.D. Padi is the wealth people who was increasing and the distributor channel who was welcome.

  9. A modified Seeded Region Growing algorithm for vessel segmentation in breast MRI images for investigating the nature of potential lesions

    Science.gov (United States)

    Glotsos, D.; Vassiou, K.; Kostopoulos, S.; Lavdas, El; Kalatzis, I.; Asvestas, P.; Arvanitis, D. L.; Fezoulidis, I. V.; Cavouras, D.

    2014-03-01

    The role of Magnetic Resonance Imaging (MRI) as an alternative protocol for screening of breast cancer has been intensively investigated during the past decade. Preliminary research results have indicated that gadolinium-agent administrative MRI scans may reveal the nature of breast lesions by analyzing the contrast-agent's uptake time. In this study, we attempt to deduce the same conclusion, however, from a different perspective by investigating, using image processing, the vascular network of the breast at two different time intervals following the administration of gadolinium. Twenty cases obtained from a 3.0-T MRI system (SIGNA HDx; GE Healthcare) were included in the study. A new modification of the Seeded Region Growing (SRG) algorithm was used to segment vessels from surrounding background. Delineated vessels were investigated by means of their topology, morphology and texture. Results have shown that it is possible to estimate the nature of the lesions with approximately 94.4% accuracy, thus, it may be claimed that the breast vascular network does encodes useful, patterned, information, which can be used for characterizing breast lesions.

  10. World oil demand's shift toward faster growing and less price-responsive products and regions

    Energy Technology Data Exchange (ETDEWEB)

    Dargay, Joyce M. [Institute for Transport Studies, University of Leeds, Leeds LS2 9JT (United Kingdom); Gately, Dermot [Dept. of Economics, New York University, 19W. 4 St., New York, NY 10012 (United States)

    2010-10-15

    Using data for 1971-2008, we estimate the effects of changes in price and income on world oil demand, disaggregated by product - transport oil, fuel oil (residual and heating oil), and other oil - for six groups of countries. Most of the demand reductions since 1973-74 were due to fuel-switching away from fuel oil, especially in the OECD; in addition, the collapse of the Former Soviet Union (FSU) reduced their oil consumption substantially. Demand for transport and other oil was much less price-responsive, and has grown almost as rapidly as income, especially outside the OECD and FSU. World oil demand has shifted toward products and regions that are faster growing and less price-responsive. In contrast to projections to 2030 of declining per-capita demand for the world as a whole - by the U.S. Department of Energy (DOE), International Energy Agency (IEA) and OPEC - we project modest growth. Our projections for total world demand in 2030 are at least 20% higher than projections by those three institutions, using similar assumptions about income growth and oil prices, because we project rest-of-world growth that is consistent with historical patterns, in contrast to the dramatic slowdowns which they project. (author)

  11. Developing Inventory Projection Models Using Empirical Net Forest Growth and Growing-Stock Density Relationships Across U.S. Regions and Species Group

    Science.gov (United States)

    Prakash Nepal; Peter J. Ince; Kenneth E. Skog; Sun J. Chang

    2012-01-01

    This paper describes a set of empirical net forest growth models based on forest growing-stock density relationships for three U.S. regions (North, South, and West) and two species groups (softwoods and hardwoods) at the regional aggregate level. The growth models accurately predict historical U.S. timber inventory trends when we incorporate historical timber harvests...

  12. Rice Cellulose SynthaseA8 Plant-Conserved Region Is a Coiled-Coil at the Catalytic Core Entrance

    Energy Technology Data Exchange (ETDEWEB)

    Rushton, Phillip S.; Olek, Anna T.; Makowski, Lee; Badger, John; Steussy, C. Nicklaus; Carpita, Nicholas C.; Stauffacher, Cynthia V. (NEU); (Purdue)

    2016-11-22

    The crystallographic structure of a rice (Oryza sativa) cellulose synthase, OsCesA8, plant-conserved region (P-CR), one of two unique domains in the catalytic domain of plant CesAs, was solved to 2.4 Å resolution. Two antiparallel α-helices form a coiled-coil domain linked by a large extended connector loop containing a conserved trio of aromatic residues. The P-CR structure was fit into a molecular envelope for the P-CR domain derived from small-angle X-ray scattering data. The P-CR structure and molecular envelope, combined with a homology-based chain trace of the CesA8 catalytic core, were modeled into a previously determined CesA8 small-angle X-ray scattering molecular envelope to produce a detailed topological model of the CesA8 catalytic domain. The predicted position for the P-CR domain from the molecular docking models places the P-CR connector loop into a hydrophobic pocket of the catalytic core, with the coiled-coil aligned near the entrance of the substrate UDP-glucose into the active site. In this configuration, the P-CR coiled-coil alone is unlikely to regulate substrate access to the active site, but it could interact with other domains of CesA, accessory proteins, or other CesA catalytic domains to control substrate delivery.

  13. A Multi-Level Approach to Modeling Rapidly Growing Mega-Regions as a Coupled Human-Natural System

    Science.gov (United States)

    Koch, J. A.; Tang, W.; Meentemeyer, R. K.

    2013-12-01

    The FUTure Urban-Regional Environment Simulation (FUTURES) integrates information on nonstationary drivers of land change (per capita land area demand, site suitability, and spatial structure of conversion events) into spatial-temporal projections of changes in landscape patterns (Meentemeyer et al., 2013). One striking feature of FUTURES is its patch-growth algorithm that includes feedback effects of former development events across several temporal and spatial scales: cell-level transition events are aggregated into patches of land change and their further growth is based on empirically derived parameters controlling its size, shape, and dispersion. Here, we augment the FUTURES modeling framework by expanding its multilevel structure and its representation of human decision making. The new modeling framework is hierarchically organized as nested subsystems including the latest theory on telecouplings in coupled human-natural systems (Liu et al., 2013). Each subsystem represents a specific level of spatial scale and embraces agents that have decision making authority at a particular level. The subsystems are characterized with regard to their spatial representation and are connected via flows of information (e.g. regulations and policies) or material (e.g. population migration). To provide a modeling framework that is applicable to a wide range of settings and geographical regions and to keep it computationally manageable, we implement a 'zooming factor' that allows to enable or disable subsystems (and hence the represented processes), based on the extent of the study region. The implementation of the FUTURES modeling framework for a specific case study follows the observational modeling approach described in Grimm et al. (2005), starting from the analysis of empirical data in order to capture the processes relevant for specific scales and to allow a rigorous calibration and validation of the model application. In this paper, we give an introduction to the basic

  14. Diversity of global rice markets and the science required for consumer-targeted rice breeding

    Science.gov (United States)

    With the ever-increasing global demand for high quality rice in both local production regions and with Western consumers, we have a strong desire to understand better the importance of different quality traits that make up the rice grain and obtain a full picture of rice quality demographics. Rice ...

  15. Neglecting rice milling yield and quality underestimates economic losses from high-temperature stress.

    Directory of Open Access Journals (Sweden)

    Nathaniel B Lyman

    Full Text Available Future increases in global surface temperature threaten those worldwide who depend on rice production for their livelihoods and food security. Past analyses of high-temperature stress on rice production have focused on paddy yield and have failed to account for the detrimental impact of high temperatures on milling quality outcomes, which ultimately determine edible (marketable rice yield and market value. Using genotype specific rice yield and milling quality data on six common rice varieties from Arkansas, USA, combined with on-site, half-hourly and daily temperature observations, we show a nonlinear effect of high-temperature stress exposure on yield and milling quality. A 1 °C increase in average growing season temperature reduces paddy yield by 6.2%, total milled rice yield by 7.1% to 8.0%, head rice yield by 9.0% to 13.8%, and total milling revenue by 8.1% to 11.0%, across genotypes. Our results indicate that failure to account for changes in milling quality leads to understatement of the impacts of high temperatures on rice production outcomes. These dramatic losses result from reduced paddy yield and increased percentages of chalky and broken kernels, which together decrease the quantity and market value of milled rice. Recently published estimates show paddy yield reductions of up to 10% across the major rice-producing regions of South and Southeast Asia due to rising temperatures. The results of our study suggest that the often-cited 10% figure underestimates the economic implications of climate change for rice producers, thus potentially threatening future food security for global rice producers and consumers.

  16. Climate Change Implications to Irrigated Rice Production in Southern Brazil: A Modelling Approach

    Science.gov (United States)

    Dos Santos, Thiago

    Rice is one of the staple foods for more than three billion people worldwide. When cultivated under irrigated conditions (i.e. lowland rice), rice is one of the most intensive water consumer crops globally. Therefore, representation of rice growth should be integrated into the latest land surface models to allow studies on food security and to ensure that accurate simulations of the bidirectional feedbacks between the land surface and atmosphere take place. In this study, I present a new process-based model for rice fields that includes rice growth and rice irrigation as modules within the Agro-IBIS dynamic agro-ecosystem model. The model includes a series of equations, agricultural management parameters and an irrigation scheme that are specifically tailored for rice crops. The model was evaluated against leaf area index and biomass observations, obtained for one growing season in Rio Grande do Sul state (southern Brazil), and in Los Banos, Philippines. The model accurately captured the temporal dynamics of leaf area index in both the Brazilian and the Philippine sites, and predicted end-of-season biomass with an error of between -9.5% and 11.3% depending on the location and the plant organ. Rice phenology is predicted by the model based on experimentally-derived growth rates, and was evaluated by comparing simulated and observed durations of the four growth phases considered by the model. Agro-IBIS showed a tendency to overestimate the duration of the growth stages between 3% and 16%, but underestimated by 8% the duration of the panicle formation phase in one growing season. The new irrigation model is based on the water balance at the surface and applies irrigation in order to keep the water layer at the paddy field always in the optimum level. A set of climate projections from global climate models under two emission scenarios, and excluding and considering CO2 fertilizations effects, was used to drive the updated Agro-IBIS to estimate the effects of climate

  17. Abundance and Diversity of Wild Bees (Hymenoptera: Apoidea) Found in Lowbush Blueberry Growing Regions of Downeast Maine.

    Science.gov (United States)

    Bushmann, Sara L; Drummond, Francis A

    2015-08-01

    Insect-mediated pollination is critical for lowbush blueberry (Ericaceae: Vaccinium angustifolium Aiton) fruit development. Past research shows a persistent presence of wild bees (Hymenoptera: Apoidea) providing pollination services even when commercial pollinators are present. We undertook the study to 1) provide a description of bee communities found in lowbush blueberry-growing regions, 2) identify field characteristics or farm management practices that influence those communities, 3) identify key wild bee pollinators that provide pollination services for the blueberry crop, and 4) identify non-crop plants found within the cropping system that provide forage for wild bees. During a 4-year period, we collected solitary and eusocial bees in over 40 fields during and after blueberry bloom, determining a management description for each field. We collected 4,474 solitary bees representing 124 species and 1,315 summer bumble bees representing nine species. No bumble bee species were previously unknown in Maine, yet we document seven solitary bee species new for the state. These include species of the genera Nomada, Lasioglossum, Calliopsis, and Augochloropsis. No field characteristic or farm management practice related to bee community structure, except bumble bee species richness was higher in certified organic fields. Pollen analysis determined scopal loads of 67-99% ericaceous pollen carried by five species of Andrena. Our data suggest two native ericaceous plants, Kalmia angustifolia L. and Gaylussacia baccata (Wangenheim), provide important alternative floral resources. We conclude that Maine blueberry croplands are populated with a species-rich bee community that fluctuates in time and space. We suggest growers develop and maintain wild bee forage and nest sites. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  18. Selección de Píxel Semilla mediante Wavelets para Crecimiento por Regiones Difuso (Selection of Seed Pixel Through Wavelets for Fuzzy Region Growing

    Directory of Open Access Journals (Sweden)

    Damián Valdés Santiago

    2015-08-01

    Full Text Available RESUMEN El análisis de masas y tumores en mamografía es un problema difícil porque los signos del cáncer pueden ser mínimos o estar superpuestos en el tejido. Las técnicas de procesamiento de imágenes pueden mejorar el diagnóstico reduciendo los costos. La detección de masas es un reto debido al bajo contraste y la pobre definición de los bordes. Una solución al problema es representar una masa mediante conjuntos difusos. En este trabajo se estudia la propuesta de Guliato et al. que plantean dos métodos de segmentación difusos. El primero determina el borde de una masa por crecimiento por regiones clásico, luego de un preprocesamiento difuso de la región de interés. El segundo es un método de crecimiento por regiones difuso. Estos métodos necesitan un píxel semilla y un umbral. En este trabajo se propone una selección automática del píxel semilla mediante la selección de píxeles muy correlacionados según la transformada wavelet de la imagen. Como medida de evaluación en la segmentación, se emplea la medida de ambigüedad definida por los autores citados. Con la selección de semilla propuesta se obtienen mejores resultados en la segmentación, respecto al uso de una semilla aleatoria. ABSTRACT The analysis of masses and tumors in mammography is difficult because developing signs of cancer may be minimal or masked by superimposed tissues. Image analysis techniques have the potential to improve the diagnostic accuracy of mammography, and reduce health-care costs. Detection of breast masses is a challenging problem due to low contrast and poor definition of their boundaries. An alternative to address this problem is to represent tumor or mass regions by fuzzy sets. In this paper, two methods of fuzzy segmentation proposed by Guliato et al. are studied. The first method determines the boundary of a mass by classic region growing after a fuzzy preprocessing step. The second method is a fuzzy region-growing method. This

  19. Interaction of genotype x management on vegetative growth and weed suppression of aerobic rice

    NARCIS (Netherlands)

    Zhao, D.L.; Bastiaans, L.; Atlin, G.N.; Spiertz, J.H.J.

    2007-01-01

    Water shortage in drought-prone rice-growing areas of the world is threatening conventional irrigated rice production systems, in which rice is transplanted into fields where standing water is maintained until harvest. Aerobic rice production systems, in which rice is grown as a direct-seeded upland

  20. Volumetric analysis of pelvic hematomas after blunt trauma using semi-automated seeded region growing segmentation: a method validation study.

    Science.gov (United States)

    Dreizin, David; Bodanapally, Uttam K; Neerchal, Nagaraj; Tirada, Nikki; Patlas, Michael; Herskovits, Edward

    2016-11-01

    Manually segmented traumatic pelvic hematoma volumes are strongly predictive of active bleeding at conventional angiography, but the method is time intensive, limiting its clinical applicability. We compared volumetric analysis using semi-automated region growing segmentation to manual segmentation and diameter-based size estimates in patients with pelvic hematomas after blunt pelvic trauma. A 14-patient cohort was selected in an anonymous randomized fashion from a dataset of patients with pelvic binders at MDCT, collected retrospectively as part of a HIPAA-compliant IRB-approved study from January 2008 to December 2013. To evaluate intermethod differences, one reader (R1) performed three volume measurements using the manual technique and three volume measurements using the semi-automated technique. To evaluate interobserver differences for semi-automated segmentation, a second reader (R2) performed three semi-automated measurements. One-way analysis of variance was used to compare differences in mean volumes. Time effort was also compared. Correlation between the two methods as well as two shorthand appraisals (greatest diameter, and the ABC/2 method for estimating ellipsoid volumes) was assessed with Spearman's rho (r). Intraobserver variability was lower for semi-automated compared to manual segmentation, with standard deviations ranging between ±5-32 mL and ±17-84 mL, respectively (p = 0.0003). There was no significant difference in mean volumes between the two readers' semi-automated measurements (p = 0.83); however, means were lower for the semi-automated compared with the manual technique (manual: mean and SD 309.6 ± 139 mL; R1 semi-auto: 229.6 ± 88.2 mL, p = 0.004; R2 semi-auto: 243.79 ± 99.7 mL, p = 0.021). Despite differences in means, the correlation between the two methods was very strong and highly significant (r = 0.91, p hematoma volumes correlate strongly with manually segmented volumes. Since semi-automated segmentation

  1. ANALYZING THE TECHNICAL EFFICIENCY OF RICE FARMS IN THE RIO GRANDE DO SUL

    Directory of Open Access Journals (Sweden)

    Augusto Mussi Alvim

    2015-03-01

    Full Text Available This paper evaluates the technical efficiency in rice farms in Rio Grande do Sul (RS. For this, we use the Data Envelopment Analysis (DEA and the Tobit regression model. The study use the variables available in the Census of the Institute of Irrigated Rice of RS (IRGA, 2006. The study shows that most of the rice farmers are technically inefficient on local terms, and only 5.7% are efficient. In addition, it is possible to observe that the main variables, which increase the level of efficiency in different regions of the state, are technical assistance, education level and growing system. The results show that there are important differences between the rice farms, which depends of the region of RS and of the producer condition (owner or tenant.

  2. Verification of strontium isotopes and its possible source in Indian basmati rice for geographical authentication study

    International Nuclear Information System (INIS)

    Lagad, Rupali A.; Rai, Vinai K.; Singh, Sunil K.

    2015-01-01

    Due to globalization of food and agriculture product's market, there is increasing awareness of safety and authenticity of the food products. Consumers continuously demand the reassurance of origin and content of their foods. Hence safety and authenticity of food has been a growing analytical challenge. Basmati rice, the unique aromatic quality rice and a nature's gift to Indian sub-continent is produced and consumed on a large scale. Due to its profitable market as well as great demand overseas true Basmati rice market is facing unfair competition by unscrupulous producers for profit. Very few researches for geographical authentication are available for Indian basmati rice. Sr isotope composition of rice could be used as a geographical source indicator; however, little information is available on the possible source (lithogenic, biogenic, silicate, carbonate) of Sr in Rice or any other food stuff for tracing the geographical origin using Strontium isotopes as tracer. Hence in order to determine suitability of strontium isotopes as tracer and its possible source in rice for geographical authentication study, strontium isotope signature study of authentic Indian Basmati rice along with in situ soil and water of that region have been carried out

  3. Rice microstructure

    Science.gov (United States)

    An understanding of plant structure is desirable to obtain a clear idea of the overall impact of a crop. A mature rice plant consists of leafy components (left in the field post-harvest) and paddy rice (collected). The rice plant is supported by a hollow stem (culm) with leaf sheaths attached to nod...

  4. Analysis of Genetic Diversity and Population Structure of Rice Germplasm from North-Eastern Region of India and Development of a Core Germplasm Set

    Science.gov (United States)

    Singh, Amit Kumar; Kumar, Sundeep; Srinivasan, Kalyani; Tyagi, R. K.; Ahmad, Altaf; Singh, N. K.; Singh, Rakesh

    2014-01-01

    The North-Eastern region (NER) of India, comprising of Arunachal Pradesh, Assam, Manipur, Meghalaya, Mizoram, Nagaland and Tripura, is a hot spot for genetic diversity and the most probable origin of rice. North-east rice collections are known to possess various agronomically important traits like biotic and abiotic stress tolerance, unique grain and cooking quality. The genetic diversity and associated population structure of 6,984 rice accessions, originating from NER, were assessed using 36 genome wide unlinked single nucleotide polymorphism (SNP) markers distributed across the 12 rice chromosomes. All of the 36 SNP loci were polymorphic and bi-allelic, contained five types of base substitutions and together produced nine types of alleles. The polymorphic information content (PIC) ranged from 0.004 for Tripura to 0.375 for Manipur and major allele frequency ranged from 0.50 for Assam to 0.99 for Tripura. Heterozygosity ranged from 0.002 in Nagaland to 0.42 in Mizoram and gene diversity ranged from 0.006 in Arunachal Pradesh to 0.50 in Manipur. The genetic relatedness among the rice accessions was evaluated using an unrooted phylogenetic tree analysis, which grouped all accessions into three major clusters. For determining population structure, populations K = 1 to K = 20 were tested and population K = 3 was present in all the states, with the exception of Meghalaya and Manipur where, K = 5 and K = 4 populations were present, respectively. Principal Coordinate Analysis (PCoA) showed that accessions were distributed according to their population structure. AMOVA analysis showed that, maximum diversity was partitioned at the individual accession level (73% for Nagaland, 58% for Arunachal Pradesh and 57% for Tripura). Using POWERCORE software, a core set of 701 accessions was obtained, which accounted for approximately 10% of the total NE India collections, representing 99.9% of the allelic diversity. The rice core set developed will be a

  5. Analysis of genetic diversity and population structure of rice germplasm from north-eastern region of India and development of a core germplasm set.

    Directory of Open Access Journals (Sweden)

    Debjani Roy Choudhury

    Full Text Available The North-Eastern region (NER of India, comprising of Arunachal Pradesh, Assam, Manipur, Meghalaya, Mizoram, Nagaland and Tripura, is a hot spot for genetic diversity and the most probable origin of rice. North-east rice collections are known to possess various agronomically important traits like biotic and abiotic stress tolerance, unique grain and cooking quality. The genetic diversity and associated population structure of 6,984 rice accessions, originating from NER, were assessed using 36 genome wide unlinked single nucleotide polymorphism (SNP markers distributed across the 12 rice chromosomes. All of the 36 SNP loci were polymorphic and bi-allelic, contained five types of base substitutions and together produced nine types of alleles. The polymorphic information content (PIC ranged from 0.004 for Tripura to 0.375 for Manipur and major allele frequency ranged from 0.50 for Assam to 0.99 for Tripura. Heterozygosity ranged from 0.002 in Nagaland to 0.42 in Mizoram and gene diversity ranged from 0.006 in Arunachal Pradesh to 0.50 in Manipur. The genetic relatedness among the rice accessions was evaluated using an unrooted phylogenetic tree analysis, which grouped all accessions into three major clusters. For determining population structure, populations K = 1 to K = 20 were tested and population K = 3 was present in all the states, with the exception of Meghalaya and Manipur where, K = 5 and K = 4 populations were present, respectively. Principal Coordinate Analysis (PCoA showed that accessions were distributed according to their population structure. AMOVA analysis showed that, maximum diversity was partitioned at the individual accession level (73% for Nagaland, 58% for Arunachal Pradesh and 57% for Tripura. Using POWERCORE software, a core set of 701 accessions was obtained, which accounted for approximately 10% of the total NE India collections, representing 99.9% of the allelic diversity. The rice core set developed

  6. Analysis of genetic diversity and population structure of rice germplasm from north-eastern region of India and development of a core germplasm set.

    Science.gov (United States)

    Roy Choudhury, Debjani; Singh, Nivedita; Singh, Amit Kumar; Kumar, Sundeep; Srinivasan, Kalyani; Tyagi, R K; Ahmad, Altaf; Singh, N K; Singh, Rakesh

    2014-01-01

    The North-Eastern region (NER) of India, comprising of Arunachal Pradesh, Assam, Manipur, Meghalaya, Mizoram, Nagaland and Tripura, is a hot spot for genetic diversity and the most probable origin of rice. North-east rice collections are known to possess various agronomically important traits like biotic and abiotic stress tolerance, unique grain and cooking quality. The genetic diversity and associated population structure of 6,984 rice accessions, originating from NER, were assessed using 36 genome wide unlinked single nucleotide polymorphism (SNP) markers distributed across the 12 rice chromosomes. All of the 36 SNP loci were polymorphic and bi-allelic, contained five types of base substitutions and together produced nine types of alleles. The polymorphic information content (PIC) ranged from 0.004 for Tripura to 0.375 for Manipur and major allele frequency ranged from 0.50 for Assam to 0.99 for Tripura. Heterozygosity ranged from 0.002 in Nagaland to 0.42 in Mizoram and gene diversity ranged from 0.006 in Arunachal Pradesh to 0.50 in Manipur. The genetic relatedness among the rice accessions was evaluated using an unrooted phylogenetic tree analysis, which grouped all accessions into three major clusters. For determining population structure, populations K = 1 to K = 20 were tested and population K = 3 was present in all the states, with the exception of Meghalaya and Manipur where, K = 5 and K = 4 populations were present, respectively. Principal Coordinate Analysis (PCoA) showed that accessions were distributed according to their population structure. AMOVA analysis showed that, maximum diversity was partitioned at the individual accession level (73% for Nagaland, 58% for Arunachal Pradesh and 57% for Tripura). Using POWERCORE software, a core set of 701 accessions was obtained, which accounted for approximately 10% of the total NE India collections, representing 99.9% of the allelic diversity. The rice core set developed will be a

  7. Remotely sensed rice yield prediction using multi-temporal NDVI data derived from NOAA's-AVHRR.

    Science.gov (United States)

    Huang, Jingfeng; Wang, Xiuzhen; Li, Xinxing; Tian, Hanqin; Pan, Zhuokun

    2013-01-01

    Grain-yield prediction using remotely sensed data have been intensively studied in wheat and maize, but such information is limited in rice, barley, oats and soybeans. The present study proposes a new framework for rice-yield prediction, which eliminates the influence of the technology development, fertilizer application, and management improvement and can be used for the development and implementation of provincial rice-yield predictions. The technique requires the collection of remotely sensed data over an adequate time frame and a corresponding record of the region's crop yields. Longer normalized-difference-vegetation-index (NDVI) time series are preferable to shorter ones for the purposes of rice-yield prediction because the well-contrasted seasons in a longer time series provide the opportunity to build regression models with a wide application range. A regression analysis of the yield versus the year indicated an annual gain in the rice yield of 50 to 128 kg ha(-1). Stepwise regression models for the remotely sensed rice-yield predictions have been developed for five typical rice-growing provinces in China. The prediction models for the remotely sensed rice yield indicated that the influences of the NDVIs on the rice yield were always positive. The association between the predicted and observed rice yields was highly significant without obvious outliers from 1982 to 2004. Independent validation found that the overall relative error is approximately 5.82%, and a majority of the relative errors were less than 5% in 2005 and 2006, depending on the study area. The proposed models can be used in an operational context to predict rice yields at the provincial level in China. The methodologies described in the present paper can be applied to any crop for which a sufficient time series of NDVI data and the corresponding historical yield information are available, as long as the historical yield increases significantly.

  8. Geothermal rice drying unit in Kotchany, Macedonia

    International Nuclear Information System (INIS)

    Popovski, K.; Dimitrov, K.; Andrejevski, B.; Popovska, S.

    1992-01-01

    A geothermal field in Kotchany (Macedonia) has very advantageous characteristics for direct application purposes. Low content of minerals, moderate temperature (78C) and substantial available geothermal water flow (up to 300 1/s) enabled the establishment of a district heating scheme comprising mainly agricultural and industrial uses. A rice drying unit of 10 t/h capacity was installed 8 years ago, using the geothermal water as the primary heat source. A temperature drop of 75/50C enables the adaptation of conventional drying technology, already proven in practice in the surrounding rice growing region. Water to air heat exchanger and all necessary equipment and materials are of local production, made of copper and carbon steel. The use of such drying units is strongly recommended for the concrete district heating scheme because it offers a very simple geothermal application and enables improvement in the annual heating load factor without high investments in geothermal water distribution lines

  9. Concentrations and health risks of lead, cadmium, arsenic, and mercury in rice and edible mushrooms in China.

    Science.gov (United States)

    Fang, Yong; Sun, Xinyang; Yang, Wenjian; Ma, Ning; Xin, Zhihong; Fu, Jin; Liu, Xiaochang; Liu, Meng; Mariga, Alfred Mugambi; Zhu, Xuefeng; Hu, Qiuhui

    2014-03-15

    In this study, four common heavy metals, lead (Pb), cadmium (Cd), arsenic (As) and mercury (Hg) in rice and edible mushrooms of China were studied to evaluate contamination level and edible safety. Ninety two (92) rice samples were collected from the main rice growing regions in China, and 38 fresh and 21 dry edible mushroom samples were collected from typical markets in Nanjing City. The analyzed metal concentrations were significantly different between rice and edible mushroom samples (price samples respectively, were above maximum allowable concentration (MAC). In fresh edible mushroom, Pb and Hg contents in 2.6% samples were above MAC, respectively. However, only Hg content in 4.8% dry edible mushroom samples was above its MAC. Therefore, more than 95% rice and edible mushroom samples in our test had high edible safety. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Uncertainties in Integrated Climate Change Impact Assessments by Sub-setting GCMs Based on Annual as well as Crop Growing Period under Rice Based Farming System of Indo-Gangetic Plains of India

    Science.gov (United States)

    Pillai, S. N.; Singh, H.; Panwar, A. S.; Meena, M. S.; Singh, S. V.; Singh, B.; Paudel, G. P.; Baigorria, G. A.; Ruane, A. C.; McDermid, S.; Boote, K. J.; Porter, C.; Valdivia, R. O.

    2016-12-01

    Integrated assessment of climate change impact on agricultural productivity is a challenge to the scientific community due to uncertainties of input data, particularly the climate, soil, crop calibration and socio-economic dataset. However, the uncertainty due to selection of GCMs is the major source due to complex underlying processes involved in initial as well as the boundary conditions dealt in solving the air-sea interactions. Under Agricultural Modeling Intercomparison and Improvement Project (AgMIP), the Indo-Gangetic Plains Regional Research Team investigated the uncertainties caused due to selection of GCMs through sub-setting based on annual as well as crop-growth period of rice-wheat systems in AgMIP Integrated Assessment methodology. The AgMIP Phase II protocols were used to study the linking of climate-crop-economic models for two study sites Meerut and Karnal to analyse the sensitivity of current production systems to climate change. Climate Change Projections were made using 29 CMIP5 GCMs under RCP4.5 and RCP 8.5 during mid-century period (2040-2069). Two crop models (APSIM & DSSAT) were used. TOA-MD economic model was used for integrated assessment. Based on RAPs (Representative Agricultural Pathways), some of the parameters, which are not possible to get through modeling, derived from literature and interactions with stakeholders incorporated into the TOA-MD model for integrated assessment.

  11. The identification of 'hotspots' of heavy metal pollution in soil-rice systems at a regional scale in eastern China.

    Science.gov (United States)

    Li, Wanlu; Xu, Binbin; Song, Qiujin; Liu, Xingmei; Xu, Jianming; Brookes, Philip C

    2014-02-15

    Chinese agricultural soils and crops are suffering from increasing damage from heavy metals, which are introduced from various pollution sources including agriculture, traffic, mining and especially the flourishing private metal recycling industry. In this study, 219 pairs of rice grain and corresponding soil samples were collected from Wenling in Zhejiang Province to identify the spatial relationship and pollution hotspots of Cd, Cu, Ni and Zn in the soil-rice system. The mean soil concentrations of heavy metals were 0.316 mg kg(-1) for Cd, 47.3 mg kg(-1) for Cu, 31.7 mg kg(-1) for Ni and 131 mg kg(-1) for Zn, and the metal concentrations in rice grain were 0.132 mg kg(-1) for Cd, 2.46 mg kg(-1) for Cu, 0.223 mg kg(-1) for Ni and 17.4 mg kg(-1) for Zn. The coefficient of variability (CV) of soil Cd, Cu and rice Cd were 147%, 146% and 180%, respectively, indicating an extensive variability. While the CVs of other metals ranged from 23.4% to 84.3% with a moderate variability. Kriging interpolation procedure and the Local Moran's I index detected the locations of pollution hotspots of these four metals. Cd and Cu had a very similar spatial pattern, with contamination hotspots located simultaneously in the northwestern part of the study area, and there were obvious hotspots for soil Zn in the north area, while in the northeast for soil Ni. The existence of hotspots may be due to industrialization and other anthropogenic activities. An Enrichment Index (EI) was employed to measure the uptake of heavy metals by rice. The results indicated that the accumulation and availability of heavy metals in the soil-rice system may be influenced by both soil heavy metal concentrations and soil physico-chemical properties. Cross-correlograms quantitatively illustrated that EIs were significantly correlated with soil properties. Soil pH and organic matter were the most important factors controlling the uptake of heavy metals by rice. As results, positive measures should be taken into

  12. Pyrethroid insecticide exposure in school-aged children living in rice and aquacultural farming regions of Thailand.

    Science.gov (United States)

    Rohitrattana, Juthasiri; Siriwong, Wattasit; Robson, Mark; Panuwet, Parinya; Barr, Dana Boyd; Fiedler, Nancy

    2014-01-01

    Pyrethroid insecticides (PYR) are commonly used in rice farms and household pest control in Thailand. No investigative study has yet been made regarding factors associated with PYR exposure among Thai children. This study aimed to compare the levels of PYR exposure between children living in rice farms (high-intensity PYR used) and aquacultural areas (low-intensity PYR used) during the wet and dry seasons in Thailand, during which different amounts of PYR are applied. Environmental conditions and common activities of children were used to identify factors associated with PYR exposure. A cross-sectional study was done during the wet and dry seasons, respectively. A total of 53 participants aged between 6 and 8 years old were recruited from rice farms and aquacultural areas. A parental-structured interview was used to gather information about PYR use, household environments, and participants' activities. First voided morning urine samples were collected for PYR urinary metabolites (ie, 3-phenoxybenzoic acid [3-PBA] and cis/trans-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropane carboxylic acid [DCCA]) measurements. Hand wipe samples were collected during home visits, to measure PYR residues on the hands. The concentrations of urinary PYR metabolites were not significantly different between participants who lived in rice farming and those who lived in aquacultural areas, during both wet and dry seasons. Both participant groups had slightly increased urinary PYR metabolites during the wet season compared with the dry season. The results from linear regression analysis revealed that some environmental conditions and activities or practices may be used to predict trends of PYR exposure. Frequency of PYR use in farms (β=0.004) and households (β=0.07), proximity to rice farms (β=0.09), playing in rice farms (β=0.11), and oral exposure from objects exposed to PYR (β=0.08) were likely to be related to increased concentrations of PYR metabolites. These findings suggest that

  13. Performance, Economics and Potential Impact of Perennial Rice PR23 Relative to Annual Rice Cultivars at Multiple Locations in Yunnan Province of China

    Directory of Open Access Journals (Sweden)

    Guangfu Huang

    2018-04-01

    Full Text Available Perennial grain crops hold the promise of stabilizing fragile lands, while contributing grain and grazing in mixed farming systems. Recently, perennial rice was reported to successfully survive, regrow, and yield across a diverse range of environments in Southern China and Laos, with perennial rice PR23 being identified as a prime candidate for release to farmers. This paper reports the evaluation of PR23 for release, by (1 comparing its survival, regrowth, performance, and adaptation with preferred annual rices across nine ecological regions in southern Yunnan Province of China; (2 examining the economic costs and benefits of perennial versus annual rice there; and (3 discussing the evidence for the release of PR23 as a broadly adapted and acceptable cultivar for farmers. Overall, the grain yield of PR23 was similar to those of the preferred annual rice cultivars RD23 and HXR7, but the economic analysis indicated substantial labour savings for farmers by growing the perennial instead of the annual. PR23 was comparable to the annuals in phenology, plant height, grain yield, and grain size, and was acceptable in grain and cooking quality. Farmers were keen to grow it because of reduced costs and especially savings in labour. PR23 is proposed for release to farmers because of its comparable grain yields to annual rices, its acceptable grain and milling quality, its cost and labour savings, and the likely benefits to soil stability and ecological sustainability, along with more flexible farming systems.

  14. SSR based genetic diversity of pigmented and aromatic rice (Oryza sativa L.) genotypes of the western Himalayan region of India.

    Science.gov (United States)

    Ashraf, Humaira; Husaini, Amjad M; Ashraf Bhat, M; Parray, G A; Khan, Salim; Ganai, Nazir A

    2016-10-01

    A set of 24 of SSR markers were used to estimate the genetic diversity in 16 rice genotypes found in Western Himalayas of Kashmir and Himachal Pradesh, India. The level of polymorphism among the genotypes of rice was evaluated from the number of alleles and PIC value for each of the 24 SSR loci. A total of 68 alleles were detected across the 16 genotypes through the use of these 24 SSR markers The number of alleles per locus generated varied from 2 (RM 338, RM 452, RM 171) to 6 (RM 585, RM 249, RM 481, RM 162). The PIC values varied from 0.36 (RM 1) to 0.86 (RM 249) with an average of 0.62 per locus. Based on information generated, the genotypes got separated in six different clusters. Cluster 1 comprised of 4 genotypes viz; Zag 1, Zag 13, Pusa sugandh 3, and Zag 14, separated from each other at a similarity value of 0.40. Cluster second comprised of 3 landraces viz; Zag 2. Zag 4 and Zag10 separated from each other at a similarity value of 0.45. Cluster third comprised of 3 genotypes viz; Grey rice, Mushk budji and Kamad separated from each other at a similarity value of 0.46. Cluster fourth had 2 landraces viz; Kawa kreed and Loual anzul, and was not sub clustered. Fifth cluster had 3 genotypes viz; Zag 12, Purple rice and Jhelum separated from each other at a similarity value of 0.28. Cluster 6 comprised of a single popular variety i.e. Shalimar rice 1 with independent lineage.

  15. Assessment and genetic analysis of heavy metal content in rice grain using an Oryza sativa × O. rufipogon backcross inbred line population.

    Science.gov (United States)

    Huang, De-Run; Fan, Ye-Yang; Hu, Biao-Lin; Xiao, Ye-Qing; Chen, Da-Zhou; Zhuang, Jie-Yun

    2018-03-01

    Heavy metal accumulation in rice is a growing concern for public health. Backcross inbred lines derived from an interspecific cross of Oryza sativa × O. rufipogon were grown in two distinct ecological locations (Hangzhou and Lingshui, China). The objective of this study was to characterise the contents of heavy metal in rice grains, and to identify quantitative trait loci (QTLs) for heavy metal contents. The contents of Ni, As, Pb, Cr and Hg in milled rice showed a significant decline as compared with those in brown rice, whereas the content of Cd showed little change. The concentration of heavy metal in rice grain varied greatly between the two environments. A total of 24 QTLs responsible for heavy metal contents were detected, including two for both the brown and milled rice, 13 for brown rice only, and nine for milled rice only. All the QTLs except two had the enhancing alleles derived from O. rufipogon. Sixteen QTLs were clustered in six chromosomal regions. Environmental variation plays an important role in the heavy metal contents in rice grain. QTLs detected in this study might be useful for breeding rice varieties with low heavy metal content. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  16. Potential of VIS-NIR-SWIR Spectroscopy from the Chinese Soil Spectral Library for Assessment of Nitrogen Fertilization Rates in the Paddy-Rice Region, China

    Directory of Open Access Journals (Sweden)

    Shuo Li

    2015-05-01

    Full Text Available To meet growing food demand with limited land and reduced environmental impact, soil testing and formulated fertilization methods have been widely adopted around the world. However, conventional technology for investigating nitrogen fertilization rates (NFR is time consuming and expensive. Here, we evaluated the use of visible near-infrared shortwave-infrared (VIS-NIR-SWIR: 400–2500 nm spectroscopy for the assessment of NFR to provide necessary information for fast, cost-effective and precise fertilization rating. Over 2000 samples were collected from paddy-rice fields in 10 Chinese provinces; samples were added to the Chinese Soil Spectral Library (CSSL. Two kinds of modeling strategies for NFR, quantitative estimation of soil N prior to classification and qualitative by classification, were employed using partial least squares regression (PLSR, locally weighted regression (LWR, and support vector machine discriminant analogy (SVMDA. Overall, both LWR and SVMDA had moderate accuracies with Cohen’s kappa coefficients of 0.47 and 0.48, respectively, while PLSR had fair accuracy (0.37. We conclude that VIS-NIR-SWIR spectroscopy coupled with the CSSL appears to be a viable, rapid means for the assessment of NFR in paddy-rice soil. Based on qualitative classification of soil spectral data only, it is recommended that the SVMDA be adopted for rapid implementation.

  17. Identification and characterization of a gibberellin-regulated protein, which is ASR5, in the basal region of rice leaf sheaths.

    Science.gov (United States)

    Takasaki, Hironori; Mahmood, Tariq; Matsuoka, Makoto; Matsumoto, Hiroshi; Komatsu, Setsuko

    2008-04-01

    Gibberellins (GAs) regulate growth and development in higher plants. To identify GA-regulated proteins during rice leaf sheath elongation, a proteomic approach was used. Proteins from the basal region of leaf sheath in rice seedling treated with GA(3) were analyzed by fluorescence two-dimensional difference gel electrophoresis. The levels of abscisic acid-stress-ripening-inducible 5 protein (ASR5), elongation factor-1 beta, translationally controlled tumor protein, fructose-bisphosphate aldolase and a novel protein increased; whereas the level of RuBisCO subunit binding-protein decreased by GA(3) treatment. ASR5 out of these six proteins was significantly regulated by GA(3) at the protein level but not at the mRNA level in the basal region of leaf sheaths. Since this protein is regulated not only by abscisic acid but also by GA(3), these results indicate that ASR5 might be involved in plant growth in addition to stress in the basal regions of leaf sheaths.

  18. Relative Prevalence of Grapevine Leafroll-Associated Virus Species in Wine Grape-Growing Regions of California.

    Directory of Open Access Journals (Sweden)

    Abhineet M Sharma

    Full Text Available Some diseases manifest as one characteristic set of symptoms to the host, but can be caused by multiple pathogens. Control treatments based on plant symptoms can make it difficult to effectively manage such diseases, as the biology of the underlying pathogens can vary. Grapevine leafroll disease affects grapes worldwide, and is associated with several viral species in the family Closteroviridae. Whereas some of the viruses associated with this disease are transmitted by insect vectors, others are only graft-transmissible. In three regions of California, we surveyed vineyards containing diseased vines and screened symptomatic plants for all known viral species associated with grapevine leafroll disease. Relative incidence of each virus species differed among the three regions regions, particularly in relation to species with known vectors compared with those only known to be graft-transmitted. In one region, the pathogen population was dominated by species not known to have an insect vector. In contrast, populations in the other surveyed regions were dominated by virus species that are vector-transmissible. Our survey did not detect viruses associated with grapevine leafroll disease at some sites with characteristic disease symptoms. This could be explained either by undescribed genetic diversity among these viruses that prevented detection with available molecular tools at the time the survey was performed, or a misidentification of visual symptoms that may have had other underlying causes. Based on the differences in relative prevalence of each virus species among regions and among vineyards within regions, we expect that region and site-specific management strategies are needed for effective disease control.

  19. Investigation of Polymorphisms in Coding Region of OsHKT1 in Relation to Salinity in Rice

    Directory of Open Access Journals (Sweden)

    Pham Quynh-Hoa

    2016-11-01

    Full Text Available Rice (Oryza sativa is sensitive to salinity, but the salt tolerance level differs among cultivars, which might result from natural variations in the genes that are responsible for salt tolerance. High-affinity potassium transporter (HKTs has been proven to be involved in salt tolerance in plants. Therefore, we screened for natural nucleotide polymorphism in the coding sequence of OsHKT1, which encodes the HKT protein in eight Vietnamese rice cultivars differing in salt tolerance level. In total, seven nucleotide substitutions in coding sequence of OsHKT1 were found, including two non-synonymous and five synonymous substitutions. Further analysis revealed that these two non-synonymous nucleotide substitutions (G50T and T1209A caused changes in amino acids (Gly17Val and Asp403Glu at signal peptide and the loop of the sixth transmembrane domain, respectively. To assess the potential effect of these substitutions on the protein function, the 3D structure of HKT protein variants was modelled by using PHYRE2 webserver. The results showed that no difference was observed when compared those predicted 3D structure of HKT protein variants with each other. In addition, the codon bias of synonymous substitutions cannot clearly show correlation with salt tolerance level. It might be interesting to further investigate the functional roles of detected non-synonymous substitutions as it might correlate to salt tolerance in rice.

  20. Single spore isolation and morphological characterization of local Malaysian isolates of rice blast fungus Magnoporthe grisea

    Science.gov (United States)

    Mishra, Ankitta; Ratnam, Wickneswari; Bhuiyan, Md Atiqur Rahman; Ponaya, Ariane; Jena, Khisord K.

    2015-09-01

    Rice blast is a destructive disease, caused by the fungal pathogen Magnaporthe grisea. It causes considerable damage to rice and leads to crop loss in rice growing regions worldwide. Although fungicides can be used to control rice blast, they generate additional cost in rice production and contamination of environment and food. Therefore, the use of resistant varieties is thought to be one of the most economically and environmentally efficient ways of crop protection from the disease. Six new local Malaysian isolates of M. grisea were isolated using single spore isolation method. Five isolates were from infected leaf samples collected from Kompleks Latihan MADA, Kedah and one was from Kelantan. These isolates were identified using morphological characteristics and microscopic studies and later confirmed by ITSequences. These isolates were induced to sporulate and used for greenhouse screening on two differential rice varieties: Mahsuri (susceptible) and Pongsu Seribu 2 (resistant). Among the 6 isolates, isolate number 3 was found to be the most virulent showing high sporulation while isolate number 4 was very slow growing, and the least virulent.

  1. Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice.

    Science.gov (United States)

    Wang, Ningning; Zhang, Di; Wang, Zhenhui; Xun, Hongwei; Ma, Jian; Wang, Hui; Huang, Wei; Liu, Ying; Lin, Xiuyun; Li, Ning; Ou, Xiufang; Zhang, Chunyu; Wang, Ming-Bo; Liu, Bao

    2014-06-30

    Endogenous small (sm) RNAs (primarily si- and miRNAs) are important trans/cis-acting regulators involved in diverse cellular functions. In plants, the RNA-dependent RNA polymerases (RDRs) are essential for smRNA biogenesis. It has been established that RDR2 is involved in the 24 nt siRNA-dependent RNA-directed DNA methylation (RdDM) pathway. Recent studies have suggested that RDR1 is involved in a second RdDM pathway that relies mostly on 21 nt smRNAs and functions to silence a subset of genomic loci that are usually refractory to the normal RdDM pathway in Arabidopsis. Whether and to what extent the homologs of RDR1 may have similar functions in other plants remained unknown. We characterized a loss-of-function mutant (Osrdr1) of the OsRDR1 gene in rice (Oryza sativa L.) derived from a retrotransposon Tos17 insertion. Microarray analysis identified 1,175 differentially expressed genes (5.2% of all expressed genes in the shoot-tip tissue of rice) between Osrdr1 and WT, of which 896 and 279 genes were up- and down-regulated, respectively, in Osrdr1. smRNA sequencing revealed regional alterations in smRNA clusters across the rice genome. Some of the regions with altered smRNA clusters were associated with changes in DNA methylation. In addition, altered expression of several miRNAs was detected in Osrdr1, and at least some of which were associated with altered expression of predicted miRNA target genes. Despite these changes, no phenotypic difference was identified in Osrdr1 relative to WT under normal condition; however, ephemeral phenotypic fluctuations occurred under some abiotic stress conditions. Our results showed that OsRDR1 plays a role in regulating a substantial number of endogenous genes with diverse functions in rice through smRNA-mediated pathways involving DNA methylation, and which participates in abiotic stress response.

  2. Pyrethroid insecticide exposure in school-aged children living in rice and aquacultural farming regions of Thailand

    Directory of Open Access Journals (Sweden)

    Rohitrattana J

    2014-11-01

    Full Text Available Juthasiri Rohitrattana,1 Wattasit Siriwong,1,2 Mark Robson,2–4 Parinya Panuwet,5 Dana Boyd Barr,5 Nancy Fiedler3,6 1College of Public Health Sciences, Chulalongkorn University, Bangkok, Thailand; 2Thai Fogarty (ITREOH International Training and Research in Environmental and Occupational Health Center, Chulalongkorn University, Bangkok, Thailand; 3Environmental and Occupational Health Science Institute, Rutgers University, Piscataway, NJ, USA; 4School of Environmental and Biological Sciences, Rutgers University, New Brunswick, NJ, USA; 5Rollins School of Public Health, Emory University, Atlanta, GA, USA; 6Robert Wood Johnson Medical School, Rutgers University, New Brunswick, NJ, USA Background: Pyrethroid insecticides (PYR are commonly used in rice farms and household pest control in Thailand. No investigative study has yet been made regarding factors associated with PYR exposure among Thai children. Objective: This study aimed to compare the levels of PYR exposure between children living in rice farms (high-intensity PYR used and aquacultural areas (low-intensity PYR used during the wet and dry seasons in Thailand, during which different amounts of PYR are applied. Environmental conditions and common activities of children were used to identify factors associated with PYR exposure. Methods: A cross-sectional study was done during the wet and dry seasons, respectively. A total of 53 participants aged between 6 and 8 years old were recruited from rice farms and aquacultural areas. A parental-structured interview was used to gather information about PYR use, household environments, and participants' activities. First voided morning urine samples were collected for PYR urinary metabolites (ie, 3-phenoxybenzoic acid [3-PBA] and cis/trans-3-(2,2-dichlorovinyl-2,2-dimethylcyclopropane carboxylic acid [DCCA] measurements. Hand wipe samples were collected during home visits, to measure PYR residues on the hands. Results and discussion: The

  3. A Tribal Story Written in Silica: Using Phytoliths to Research the Effects of Mining on Past Wild Rice (Zizania palustris) Abundance in Sandy Lake, Minnesota

    Science.gov (United States)

    Clarke, I. R.; Jones, M. A.; Yost, C. L.; Drake, C.; Ladwig, J. L.; Myrbo, A.; Howes, T.

    2014-12-01

    Wild rice (Zizania palustris, manoomin) is an emergent aquatic plant that grows annually in the northern Great Lakes region of North America. This region is also rich in iron ore deposits and correspondingly has an extensive history of mining activities. Wild rice no longer grows in some areas where it was previously abundant. Sandy Lake, located in St. Louis County on federally protected lands that are ceded territory of the Fond du Lac Band of Lake Superior Chippewa in Minnesota and downstream of the nearby U.S. Steel Minntac mine, was selected as a test site. This lake has a history of ricing activities by the Ojibwe (Chippewa) People, for whom manoomin has cultural importance. Lake cores were taken on June 17, 2014 by LacCore and FDLRM staff and samples were obtained. This project used phytolith analysis to answer the question of past wild rice presence and abundance in Sandy Lake. Phytoliths are microscopic opal silica deposits produced in some plants. Zizania palustris produces phytolith morphotypes that are unequivocally diagnostic of this species in this region. Microscopic slides were prepared and analyzed for wild rice phytoliths. Concentration values ranged from 25 to 4379 phytoliths per cm3/year, and wild rice accumulation figures ranged from 7 to 789 phytoliths/cm2/year, the maximum values of which occurred in the 1920s and generally declined to the current lowest levels observed. Mining has likely impacted wild rice populations by causing increased sulfate levels and possibly contributing to higher lake levels.

  4. RICE CROP MAPPING USING SENTINEL-1A PHENOLOGICAL METRICS

    Directory of Open Access Journals (Sweden)

    C. F. Chen

    2016-06-01

    Full Text Available Rice is the most important food crop in Vietnam, providing food more than 90 million people and is considered as an essential source of income for majority of rural populations. Monitoring rice-growing areas is thus important to developing successful strategies for food security in the country. This paper aims to develop an approach for crop acreage estimation from multi-temporal Sentinel-1A data. We processed the data for two main cropping seasons (e.g., winter–spring, summer–autumn in the Mekong River Delta (MRD, Vietnam through three main steps: (1 data pre-processing, (3 rice classification based on crop phenological metrics, and (4 accuracy assessment of the mapping results. The classification results compared with the ground reference data indicated the overall accuracy of 86.2% and Kappa coefficient of 0.72. These results were reaffirmed by close correlation between the government’s rice area statistics for such crops (R2 > 0.95. The values of relative error in area obtained for the winter–spring and summer–autumn were -3.6% and 6.7%, respectively. This study demonstrates the potential application of multi-temporal Sentinel-1A data for rice crop mapping using information of crop phenology in the study region.

  5. Improved amylose content of rice (IR72) induced through gamma radiation

    International Nuclear Information System (INIS)

    Barrida, Adelaida C.; Rivera, Faye G.; Manrique, Mary Jayne C.; Dimaano, Arvin O.; Costimiano, Eduardo C.

    2015-01-01

    In general grain quality and quality preferences vary across rice growing countries and regions. Filipinos preferres translucent, well milled, long grain rice with aroma and minimal broken grains which is soft after cooling. The amylose content of rice starch is a major eating quality factor. The aim of this study is to develop rice mutants with good eating quality and low to intermediate amylose content through induced mutation using gamma radiation. Low to intermediate amylose content in rice were identified and selected among the advance generation lines irradiated with 200 and 300Gy dose of gamma radiation. Screening was done using qualitative method (Iodine staining method). Selected lines were analyzed quantitatively, to determine the percent amylose content. Percent amylose were group to several categories where; 0-6% is waxy, 6-12% is very low, 12-18% is low, 18-24% is intermediate and >25% is high. Results were further confirmed using molecular marker technique by looking at the waxy gene which code for granule bound starch synthase I (GBSSI) and controls amylose content in rice. Among the 30 lines selcted and anaylzes, 2 lines were confirmed to have a gene base mutation with a low to intermediate amylose content. Thus, induced mutation using gamma radiation has successfully improved amylose content in rice (IR72). (author)

  6. Establishment and early development of 'Kanza', 'Peruque', and other pecan cultivars in northern U.S. growing regions

    Science.gov (United States)

    Most pecan (Carya illinoensis) nut production in the northern range of the species (Missouri, Kansas, Northern Arkansas) is from managed wild trees. Orchards of trees grafted to improved cultivars are slowly being established in the region as economic opportunities improve. Pecan cultivars that are ...

  7. Characterization of leaves and flowers volatile constituents of Lantana camara growing in central region of Saudi Ar

    Directory of Open Access Journals (Sweden)

    Merajuddin Khan

    2016-11-01

    Full Text Available The chemical components of essential oils derived from leaves and flowers of Lantana camara growing in Saudi Arabia are analyzed for the first time using gas chromatography techniques (GC–MS, GC–FID, Co-GC, LRI determination, and database and literature searches on two different stationary phase columns (polar and nonpolar. This analysis led to the identification of total 163 compounds from leaves and flowers oils. 134 compounds were identified in the oil obtained from leaves of L. camara, whereas 127 compounds were identified in the oil obtained from flowers; these compounds account for 96.3% and 95.3% of the oil composition, respectively. The major components in the oil from leaves were cis-3-hexen-1-ol (11.3%, 1-octen-3-ol (8.7%, spathulenol (8.6%, caryophyllene oxide (7.5% and 1-hexanol (5.8%. In contrast, the major compounds in the flowers oil were caryophyllene oxide (10.6%, β-caryophyllene (9.7%, spathulenol (8.6%, γ-cadinene (5.6% and trans-β-farnesene (5.0%. To the best of our knowledge, cis-3-hexen-1-ol and 1-octen-3-ol that were identified as major components in this study have not been reported earlier from Lantana oils.

  8. Models to quantify excretion of dry matter, nitrogen, phosphorus and carbon in growing pigs fed regional diets

    OpenAIRE

    Jørgensen, Henry; Prapaspongsa, Trakarn; Vu, Van Thi Khanh; Poulsen, Hanne Damgaard

    2013-01-01

    Modern pig production contributes to many environmental problems that relate to manure, especially in areas with highly intensive production systems and in regions like Asia where the regulative control is not effective. Therefore, the objective of this study was to use three different pig diets varying in dietary protein, fibre and fat as representative for Danish (DK), Thai (TH) and Vietnamese (VN) pig production to develop and evaluate different approaches to predict/calculate excretion fr...

  9. In silico analysis of cis-acting regulatory elements in 5' regulatory regions of sucrose transporter gene families in rice (Oryza sativa Japonica) and Arabidopsis thaliana.

    Science.gov (United States)

    Ibraheem, Omodele; Botha, Christiaan E J; Bradley, Graeme

    2010-12-01

    The regulation of gene expression involves a multifarious regulatory system. Each gene contains a unique combination of cis-acting regulatory sequence elements in the 5' regulatory region that determines its temporal and spatial expression. Cis-acting regulatory elements are essential transcriptional gene regulatory units; they control many biological processes and stress responses. Thus a full understanding of the transcriptional gene regulation system will depend on successful functional analyses of cis-acting elements. Cis-acting regulatory elements present within the 5' regulatory region of the sucrose transporter gene families in rice (Oryza sativa Japonica cultivar-group) and Arabidopsis thaliana, were identified using a bioinformatics approach. The possible cis-acting regulatory elements were predicted by scanning 1.5kbp of 5' regulatory regions of the sucrose transporter genes translational start sites, using Plant CARE, PLACE and Genomatix Matinspector professional databases. Several cis-acting regulatory elements that are associated with plant development, plant hormonal regulation and stress response were identified, and were present in varying frequencies within the 1.5kbp of 5' regulatory region, among which are; A-box, RY, CAT, Pyrimidine-box, Sucrose-box, ABRE, ARF, ERE, GARE, Me-JA, ARE, DRE, GA-motif, GATA, GT-1, MYC, MYB, W-box, and I-box. This result reveals the probable cis-acting regulatory elements that possibly are involved in the expression and regulation of sucrose transporter gene families in rice and Arabidopsis thaliana during cellular development or environmental stress conditions. Copyright © 2010 Elsevier Ltd. All rights reserved.

  10. Variation in agricultural CO2 fluxes during the growing season, collected from more than ten eddy covariance towers in the Mississippi Delta Region

    Science.gov (United States)

    Runkle, B.; Suvocarev, K.; Reba, M. L.; Novick, K. A.; White, P.; Anapalli, S.; Locke, M. A.; Rigby, J.; Bhattacharjee, J.

    2016-12-01

    Agriculture is unique as an anthropogenic activity that plays both a large role in carbon and water cycling and whose management activities provide a key opportunity for responses to climate change. It is therefore especially crucial to bring field observations into the modeling community, test remote sensing products, encourage policy debate, and enable carbon offsets markets that generate revenue and fund climate-smart activities. The accurate measurement of agricultural CO2 exchange - both primary productivity and ecosystem respiration - in concert with evapotranspiration provides crucial information on agro-ecosystem functioning and improves our predictive capacity for estimating the impacts of climate change. In this study we report field measurements from more than 10 eddy covariance towers in the Lower Mississippi River Basin taken during the summer months of 2016. Many towers, some recently deployed, are being aggregated into a regional network known as Delta-Flux, which will ultimately include 15-20 towers by 2017. Set in and around the Mississippi Delta Region within Louisiana, Arkansas, and Mississippi, the network will collect flux, micrometeorological, and crop yield data in order to construct estimates of regional CO2 exchange. These time-series data are gap-filled using statistical and process-based models to generate estimates of summer CO2 flux. The tower network is comprised of sites representing widespread agriculture production, including rice, cotton, corn, soybean, and sugarcane; intensively managed pine forest; and bottomland hardwood forest. Unique experimental production practices are represented in the network and include restricted water use, bioenergy, and by-product utilization. Several towers compose multi-field sites testing innovative irrigation or management practices. Current mapping of agricultural carbon exchange - based on land cover layers and fixed crop emission factors - suggests an unconstrained carbon flux estimate in this

  11. Conflict resolution in the zoning of eco-protected areas in fast-growing regions based on game theory.

    Science.gov (United States)

    Lin, Jinyao; Li, Xia

    2016-04-01

    Zoning eco-protected areas is important for ecological conservation and environmental management. Rapid and continuous urban expansion, however, may exert negative effects on the performance of practical zoning designs. Various methods have been developed for protected area zoning, but most of them failed to consider the conflicts between urban development (for the benefit of land developers) and ecological protection (local government). Some real-world zoning schemes even have to be modified occasionally after the lengthy negotiations between the government and land developers. Therefore, our study has presented a game theory-based method to deal with this problem. Future urban expansion in the study area will be predicted by a logistic regression cellular automaton, while eco-protected areas will be delimitated using multi-objective optimization algorithm. Then, two types of conflicts between them can be resolved based on game theory, a theory of decision-making. We established a two-person dynamic game for each conflict zone. The ecological compensation mechanism was taken into account by simulating the negotiation processes between the government and land developers. A final zoning scheme can be obtained when the two sides reach agreements. The proposed method is applied to the eco-protected area zoning in Guangzhou, a fast-growing city in China. The experiments indicate that the conflicts between eco-protection and urban development will inevitably arise when using only traditional zoning methods. Based on game theory, our method can effectively resolve those conflicts, and can provide a relatively reasonable zoning scheme. This method is expected to support policy-making in environmental management and urban planning. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Temporal stability of growth and yield among Hevea genotypes introduced to a non-traditional rubber growing region of peninsular India

    Directory of Open Access Journals (Sweden)

    K.K. Vinod

    2013-12-01

    Full Text Available Extensive cultivation of Hevea brasiliensis in India now focus on non-traditional regions for rubber cultivation. As a prelude for selection of genotypes for commercial cultivation, many introduced genotypes are being tested in genotype adaptation experiments in these regions. Present study, reports for the first time, growth and yield adaptation of 28 genotypes in a non-traditional rubber growing region of peninsular India viz., the coastal Karnataka region. Agroclimate of this region was found favoring growth and establishment of all the genotypes evaluated. However, not all the genotypes grew and yielded well. Only four genotypes, RRII 203, KRS 25, PB 260 and PB 235 showed good growth and yield. On grouping, the genotypes fell into categories of moderate high yielders, moderate low yielders and low yielders. The most popular variety of the traditional region, RRII 105 did not perform well in this region. Biological stability in growth and yield of RRII 203 and PB 260 was identified as stable and these genotypes were the best adapted. KRS 25 and PB 235 had unstable yielding pattern. The best identified genotypes can be considered for extensive culture as single clone plantations or as major constituent of clone blends as well as parents in future breeding programmes. Other moderate stable yielders may be used for clone blending in smaller proportions and may be subjected to yield improvement.

  13. Temporal stability of growth and yield among Hevea genotypes introduced to a non-traditional rubber growing region of peninsular India

    Directory of Open Access Journals (Sweden)

    K.K. Vinod

    2010-09-01

    Full Text Available Extensive cultivation of Hevea brasiliensis in India now focus onnon-traditional regions for rubber cultivation. As a prelude for selection of genotypes for commercial cultivation, many introduced genotypes are being tested in genotype adaptation experiments in these regions. Present study,reports for the first time, growth and yield adaptation of 28 genotypes in a non-traditional rubber growing region of peninsular India viz., the coastal Karnataka region. Agroclimate of this region was found favoring growth andestablishment of all the genotypes evaluated. However, not all the genotypes grew and yielded well. Only four genotypes, RRII 203, KRS 25, PB 260 and PB 235 showed good growth and yield. On grouping, the genotypes fell into categories of moderate high yielders, moderate low yielders and low yielders. The most popular variety of the traditional region, RRII 105 did not perform well in this region. Biological stability in growth and yield of RRII 203 and PB 260 was identified as stable and these genotypes were the best adapted. KRS 25 and PB 235 had unstable yielding pattern. The best identifiedgenotypes can be considered for extensive culture as single clone plantations or as major constituent of clone blends as well as parents in future breeding programmes. Other moderate stable yielders may be used for clone blending in smaller proportions and may be subjected to yield improvement.

  14. Comparison on Phenolic Compounds and Antioxidant Properties of Cabernet Sauvignon and Merlot Wines from Four Wine Grape-Growing Regions in China

    Directory of Open Access Journals (Sweden)

    Bao Jiang

    2012-07-01

    Full Text Available The antioxidant activities in the Cabernet Sauvignon and Merlot wines from four wine grape-growing regions in China were measured by different analytical assays: 2,2-diphenyl-1-picrylhydrazyl (DPPH·, cupric reducing antioxidant capacity (CUPRAC, superoxide radical-scavenging activity (SRSA and the contents of total phenols, total flavonoids, total flavanols and total anthocyanins were determined. The results showed that the contents of phenolic compounds and the levels of antioxidant activity in the wine samples greatly varied with cultivar and environmental factors of vine growth. The contents of phenolic compounds and antioxidant activities in Cabernet Sauvignon and Merlot wines from the Yuquanying region of Ningxia were significantly higher than other three regions, followed by the wines from Shacheng region of Hebei, and these parameters were the lowest in Cabernet Sauvignon and Merlot wines from the Changli regions of Hebei and Xiangning region of Shanxi. Taken together, a close relationship between phenolic subclasses and antioxidant activity was observed for the wine samples. Moreover, there were significant discrepancies in the individual phenolic composition and content of four regional Cabernet Sauvignon and Merlot wines, among which the individual phenolic compounds (catechin, epicatechin, cinnamic acid, quercetin-3-O-glucuronide, quercetin-3-O-glucoside, laricitrin-3-O-glucoside and isorhamnetin-3-O-glucoside revealed a significant correlation (p < 0.05 with the antioxidant capacity in present study, especially for catechin and epicatechin.

  15. Comparison on phenolic compounds and antioxidant properties of cabernet sauvignon and merlot wines from four wine grape-growing regions in China.

    Science.gov (United States)

    Jiang, Bao; Zhang, Zhen-Wen

    2012-07-25

    The antioxidant activities in the Cabernet Sauvignon and Merlot wines from four wine grape-growing regions in China were measured by different analytical assays: 2,2-diphenyl-1-picrylhydrazyl (DPPH·), cupric reducing antioxidant capacity (CUPRAC), superoxide radical-scavenging activity (SRSA) and the contents of total phenols, total flavonoids, total flavanols and total anthocyanins were determined. The results showed that the contents of phenolic compounds and the levels of antioxidant activity in the wine samples greatly varied with cultivar and environmental factors of vine growth. The contents of phenolic compounds and antioxidant activities in Cabernet Sauvignon and Merlot wines from the Yuquanying region of Ningxia were significantly higher than other three regions, followed by the wines from Shacheng region of Hebei, and these parameters were the lowest in Cabernet Sauvignon and Merlot wines from the Changli regions of Hebei and Xiangning region of Shanxi. Taken together, a close relationship between phenolic subclasses and antioxidant activity was observed for the wine samples. Moreover, there were significant discrepancies in the individual phenolic composition and content of four regional Cabernet Sauvignon and Merlot wines, among which the individual phenolic compounds (catechin, epicatechin, cinnamic acid, quercetin-3-O-glucuronide, quercetin-3-O-glucoside, laricitrin-3-O-glucoside and isorhamnetin-3-O-glucoside) revealed a significant correlation (p < 0.05) with the antioxidant capacity in present study, especially for catechin and epicatechin.

  16. Pacific island health inequities forecast to grow unless profound changes are made to health systems in the region.

    Science.gov (United States)

    Matheson, Don; Park, Kunhee; Soakai, Taniela Sunia

    2017-10-01

    Objective Twenty years ago the Pacific's health ministers developed a 'Healthy Islands' vision to lead health development in the subregion. This paper reports on a review of health development over this period and discusses the implications for the attainment of the health related Sustainable Development Goals. Methods The review used qualitative and quantitative methods. The qualitative review included conducting semi-structured interviews with Pacific Island Government Ministers and officials, regional agencies, health workers and community members. A document review was also conducted. The quantitative review consisted of examining secondary data from regional and global data collections. Results The review found improvement in health indicators, but increasing health inequality between the Pacific and the rest of the world. Many of the larger island populations were unable to reach the health Millennium Development Goals. The 'Healthy Islands' vision remained an inspiration to health ministers and senior officials in the region. However, implementation of the 'Healthy Islands' approach was patchy, under-resourced and un-sustained. Communicable and Maternal and Child Health challenges persist alongside unprecedented levels of non-communicable diseases, inadequate levels of health finance and few skilled health workers as the major impediments to health development for many of the Pacific's countries. Conclusions The current trajectory for health in the Pacific will lead to increasing health inequity with the rest of the world. The challenges to health in the region include persisting communicable disease and maternal and child health threats, unprecedented levels of NCDs, climate change and instability, as well as low economic growth. In order to change the fortunes of this region in the age of the SDGs, a substantial investment in health is required, including in the health workforce, by countries and donors alike. That investment requires a nuanced response

  17. Molecular and biological characterization of Potato mop-top virus (PMTV, Pomovirus) isolates from potato-growing regions in Colombia

    DEFF Research Database (Denmark)

    Gil, José; Adams, Ian; Boonham, Neil

    2016-01-01

    Potato mop-top virus (PMTV) causes necrotic flecks inside and on tubers in temperate countries. In South America, these symptoms have not been observed, although the presence of the virus has been confirmed in the Andes and in Central America. To characterize PMTV isolates from the Andes, soil...... samples were taken from the main potato-producing regions in Colombia and virus was recovered by planting Nicotiana benthamiana as bait plants. The complete genomes of five isolates were sequenced and three of the isolates were inoculated to four different indicator plants. Based on sequence comparisons...

  18. A GENERAL ASSESSMENT OF CLIMATE, SOIL STRUCTURE, FOREST AREAS, GROWING STOCK AND SOME FORESTRY APPLICATIONS OF ARTVIN REGION

    OpenAIRE

    Yüksek, Turan; Ölmez, Zafer

    2011-01-01

    Artvin is located in the North Eastern Blacksea region of Turkey. Forests of Artvin are spread out from cool climate zone to cold climate zone. Artvin has approximately 390471 ha of forests, which is consist of 276883 ha (70.91%) natural forest and 113588 (29.09 %) coppice forests. Forest area covering 54.77% of total land of Artvin. Most of species of forests (natural and coppice forests) areconiferous trees, such as Picea ssp., Pinus ssp., Juniperus ssp. and broaded leaves such as Quercus s...

  19. A Framework Predicting Water Availability in a Rapidly Growing, Semi-Arid Region under Future Climate Change

    Science.gov (United States)

    Han, B.; Benner, S. G.; Glenn, N. F.; Lindquist, E.; Dahal, K. R.; Bolte, J.; Vache, K. B.; Flores, A. N.

    2014-12-01

    Climate change can lead to dramatic variations in hydrologic regime, affecting both surface water and groundwater supply. This effect is most significant in populated semi-arid regions where water availability are highly sensitive to climate-induced outcomes. However, predicting water availability at regional scales, while resolving some of the key internal variability and structure in semi-arid regions is difficult due to the highly non-linearity relationship between rainfall and runoff. In this study, we describe the development of a modeling framework to evaluate future water availability that captures elements of the coupled response of the biophysical system to climate change and human systems. The framework is built under the Envision multi-agent simulation tool, characterizing the spatial patterns of water demand in the semi-arid Treasure Valley area of Southwest Idaho - a rapidly developing socio-ecological system where urban growth is displacing agricultural production. The semi-conceptual HBV model, a population growth and allocation model (Target), a vegetation state and transition model (SSTM), and a statistically based fire disturbance model (SpatialAllocator) are integrated to simulate hydrology, population and land use. Six alternative scenarios are composed by combining two climate change scenarios (RCP4.5 and RCP8.5) with three population growth and allocation scenarios (Status Quo, Managed Growth, and Unconstrained Growth). Five-year calibration and validation performances are assessed with Nash-Sutcliffe efficiency. Irrigation activities are simulated using local water rights. Results show that in all scenarios, annual mean stream flow decreases as the projected rainfall increases because the projected warmer climate also enhances water losses to evapotranspiration. Seasonal maximum stream flow tends to occur earlier than in current conditions due to the earlier peak of snow melting. The aridity index and water deficit generally increase in the

  20. [Genetic variability of the bacterium Ralstonia solanacearum (Burkholderiales: Burholderiaceae) in the banana-growing region of Uraba (Colombia)].

    Science.gov (United States)

    Cardozo, Carolina; Rodríguez, Paola; Cotes, José Miguel; Marín, Mauricio

    2010-03-01

    The banana moko disease, caused by the bacterium Ralstonia solanacearum, is one of the most important phytopathological problems of the banana agribusiness in tropical countries. In Uraba and Magdalena (Colombia), the main exporting regions of banana in Colombia, this disease causes a destruction estimated in 16.5 ha/year. The bacterium presents an extremely high level of genetic variation that affects control measures. This is the first study of its variation in Colombia and was done with AFLP molecular markers on a population of 100 isolates from banana plants, soils and "weeds". The high level of genetic diversity, with Nei and Shannon indexes of h=0.32 and I=0.48, respectively, and the AMOVA, showed that this population is subestructured (Fst=0.66): the host is the main factor of differentiation. Even so, previous tests show that all varieties have pathogenicity on Musa.

  1. Chemical analysis and antioxidant activity of the essential oils of three Piperaceae species growing in the central region of Cuba.

    Science.gov (United States)

    Rodríguez, Elisa Jorge; Saucedo-Hernández, Yanelis; Vander Heyden, Yvan; Simó-Alfonso, Ernesto F; Ramis-Ramos, Guillermo; Lerma-García, María Jesús; Monteagudo, Urbano; Bravo, Luis; Medinilla, Mildred; de Armas, Yuriam; Herrero-Martínez, José Manuel

    2013-09-01

    The present study describes the phytochemical profile and antioxidant activity of the essential oils of three Piperaceae species collected in the central region of Cuba. The essential oils of Piper aduncum, P. auritum and P. umbellatum leaves, obtained by hydrodistillation, were analyzed by gas chromatography-mass spectrometry. The main components of P. aduncum oil were piperitone (34%), camphor (17.1%), camphene (10.9%), 1,8-cineol (8.7%) and viridiflorol (7.4%), whereas that of P. auritum and P. umbellatum was safrole (71.8 and 26.4%, respectively). The antioxidant properties of the essential oils were also evaluated using several assays for radical scavenging ability (DPPH test and reducing power) and inhibition of lipid oxidation (ferric thiocyanate method and evaluation against Cucurbita seed oil by peroxide, thiobarbituric acid and p-anisidine methods). P. auritum showed the strongest antioxidant activity among the Piper species investigated, but lower than those of butylated hydroxyanisol and propyl gallate.

  2. Effect of land cover and green space on land surface temperature of a fast growing economic region in Malaysia

    Science.gov (United States)

    Sheikhi, A.; Kanniah, K. D.; Ho, C. H.

    2015-10-01

    Green space must be increased in the development of new cities as green space can moderate temperature in the cities. In this study we estimated the land surface temperature (LST) and established relationships between LST and land cover and various vegetation and urban surface indices in the Iskandar Malaysia (IM) region. IM is one of the emerging economic gateways of Malaysia, and is envisaged to transform into a metropolis by 2025. This change may cause increased temperature in IM and therefore we conducted a study by using Landsat 5 image covering the study region (2,217 km2) to estimate LST, classify different land covers and calculate spectral indices. Results show that urban surface had highest LST (24.49 °C) and the lowest temperature was recorded in, forest, rubber and water bodies ( 20.69 to 21.02°C). Oil palm plantations showed intermediate mean LST values with 21.65 °C. We further investigated the relationship between vegetation and build up densities with temperature. We extracted 1000 collocated pure pixels of Normalized Difference Vegetation Index (NDVI), Normalized Difference Water Index (NDWI), Normalized Difference Built-up Index (NDBI), Urban Index (UI) and LST in the study area. Results show a strong and significant negative correlation with (R2= -0.74 and -0.79) respectively between NDVI, NDWI and LST . Meanwhile a strong positive correlation (R2=0.8 and 0.86) exists between NDBI, UI and LST. These results show the importance of increasing green cover in urban environment to combat any adverse effects of climate change.

  3. Characteristics of the water footprint of rice production under different rainfall years in Jilin Province, China.

    Science.gov (United States)

    Li, Hongying; Qin, Lijie; He, Hongshi

    2018-06-01

    Rice is a special crop, and its production differs from that of other crops because it requires a thin layer of water coverage for a long period. The calculation of the water footprint of rice production should differ from that of other crops owing to the rice growing process. This study improved the calculation of blue and grey water footprints of rice production and analyzed the variations in the water footprints for rice production under different rainfall years in Jilin Province. In the drought year, the green water footprint was the lowest and the blue water footprint was the highest among the three years, while in the humid year, the green water footprint was the highest and the blue water footprint was not the lowest. The areas with higher water footprints were found in the east and west regions of Jilin Province, while the areas with lower water footprints were found in the middle east and middle regions of Jilin Province. Blue water was the primary water resource for rice production, although more precipitation provided the highest green water in the humid year; also, the spatial distributions of water footprints were not the same under different rainfall years. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  4. Natural variation of rice blast resistance gene Pi-d2

    Science.gov (United States)

    Studying natural variation of rice resistance (R) genes in cultivated and wild rice relatives can predict resistance stability to rice blast fungus. In the present study, the protein coding regions of rice R gene Pi-d2 in 35 rice accessions of subgroups, aus (AUS), indica (IND), temperate japonica (...

  5. Maturity stages affect the postharvest quality and shelf-life of fruits of strawberry genotypes growing in subtropical regions

    Directory of Open Access Journals (Sweden)

    M. Moshiur Rahman

    2016-01-01

    Full Text Available The postharvest changes of five promising strawberry genotypes viz. Sweet Charlie, Festival, Camarosa, FA 008 and BARI Strawberry-1 at ambient temperature were studied under sub tropical region during the winter season (December–April of 2010–2011 and 2011–2012 in Bangladesh. Irrespective of maturity stages percent fruit decay and weight of fruits were noted minimum in Camarosa and maximum in FA 008 up to day 4 of storage. The shelf life of fruits was maximum in Camarosa and minimum in FA 008 and BARI Strawberry-1 regardless of maturity stage throughout the storage period. The TSS, total sugar and ascorbic acid content of fruits were increased with the increase in maturity stage during the storage period. In 1/3rd and 2/3rd maturity stages, the TSS and total sugar content were found the highest in Festival but at full maturity stage those were recorded higher in Camarosa. The titratable acidity was noticed the highest in 1/3rd matured fruits and gradually decreased with the increase in maturity stage as well as storage duration in all the genotypes. Ascorbic acid content of strawberry gradually decreases during the storage period. Fully matured fresh fruits of Festival contained maximum ascorbic acid content while BARI Strawberry-1 contained minimum ascorbic acid that was reduced after 3 days of storage.

  6. Reconciling the conservation of the purple swamphen (Porphyrio porphyrio and its damage in Mediterranean rice fields through sustainable non-lethal techniques

    Directory of Open Access Journals (Sweden)

    Rubén Moreno-Opo

    2018-04-01

    Full Text Available Resolving human–wildlife conflicts requires the assessment and implementation of appropriate technical measures that minimize negative impacts on socio-economic uses, including agriculture, and ensure the adequate protection of biological diversity. Rice paddies are widely distributed in the western Mediterranean region. Because of their high productivity, they can be a good habitat for waterbirds, including the purple swamphen Porphyrio porphyrio, particularly in areas where natural wetlands have been removed or reduced. As a result of its population growth, there have been increasing levels of damage caused by this species in rice fields due to stem-cutting and opening of bald patches in rice fields. With the aim of reducing damage, we evaluated the effectiveness of passive and active measures that would limit access to rice fields and deter/scare away purple swamphens in affected areas of the Ebro Delta (NE Spain. We selected the techniques according to the growth phase of rice and the activity of birds in the rice fields (perimeter fences and clearing vegetation around the rice plots during sprouting and growing phases, and falconry at maturation. There were positive results during the sprouting and growing phases thanks to fences and clearing vegetation, reducing the affected area by 37.8% between treatment and control plots. This would mean an economic savings of 18,550 €/year in compensation payments by regional administrations including the investment in implementing and maintaining passive protection measures. Active deterrence through falconry did not reduce the level of damage. The analysis of purple swamphen home range, activity centers (centroids, and the proportion of locations in and outside of rice fields showed no differences before and after dissuasive practices. These results were influenced by multiple concurrent factors including weather, the structural configuration of the rice plots and their location. In summary, we

  7. Rice production in relation to soil quality under different rice-based cropping systems

    Science.gov (United States)

    Tran Ba, Linh; Sleutel, Steven; Nguyen Van, Qui; Thi, Guong Vo; Le Van, Khoa; Cornelis, Wim

    2016-04-01

    soil depth without restriction for rice root elongation was at least 25 cm from the soil surface. We suggest these values as indicative for optimal physical soil quality when growing rice in fine-textured alluvial soils and their definition as a first step towards presenting real threshold values.

  8. Impact assessment of recent climate change on rice yields in the Heilongjiang Reclamation Area of north-east China.

    Science.gov (United States)

    Zhou, Yang; Li, Ning; Dong, Guanpeng; Wu, Wenxiang

    2013-08-30

    Investigating the degree to which climate change may have impacted on rice yields can provide an insight into how to adapt to climate change in the future. Meteorological and rice yield data over the period 1960-2009 from the Heilongjiang Reclamation Area of north-east China (HRANC) were used to explore the possible impacts of climate change on rice yields at sub-regional scale. Results showed that a warming trend was obvious in the HRANC and discernible climate fluctuations and yield variations on inter-annual scale were detected to have occurred in the 1980s and 1990s, respectively. Statistically positive correlation was observed between growing season temperature and rice yields, with an increase rate by approximately 3.60% for each 1°C rise in the minimum temperature during growing season. Such findings are consistent with the current mainstream view that warming climate may exert positive impacts on crop yields in the middle and higher latitude regions. Our study indicated that the growing season minimum temperature was a major driver of all the climatic factors to the recent increase trends in rice yield in HRANC over the last five decades. © 2013 Society of Chemical Industry.

  9. Studies on physico-chemical and cooking characteristics of rice bean varieties grown in NE region of India.

    Science.gov (United States)

    Bepary, Rejaul Hoque; Wadikar, D D; Neog, Seuji Borah; Patki, P E

    2017-03-01

    Rice bean ( Vigna umbellata ) is grown in South and Southeast Asia, and the bean has gained importance due to its nutritional strength in terms of dietary fiber, quality protein and minerals. In current study, the nutritional and functional components, cooking and thermo-gravimetric properties of eleven rice bean varieties from NE India were investigated. Results revealed that the major nutrients among the varieties ranged as follows: 54.21-60.49% carbohydrates, 15.64-21.60% protein, 1.22-2.3% fat, 5.53-6.56% crude fibre, 3.34-3.8% ash; while the functional, anti-nutritional factors and mineral were present as 1189.32-1645.8 mg gallic acid equivalent (GAE)/100 g polyphenols, 205.38-432.14 mg/100 g phytic acid, 23.14-34.12 mg/100 g oxalate, 690.7-1589.5 mg/100 g saponins, 49.90-158.17 μg/100 g hydrocyanide, 111.51-168 calcium, 5.50-10.44 zinc, 3.72-8.37 iron. Principal component analysis revealed that varieties with higher calcium, iron and ash content had lower cooking time, swelling ratio, and cooked grain hardness. It is also revealed that varieties with higher weight loss at sixth stage in thermogravimetric graph had lower carbohydrate and higher protein content. Nagadal variety had higher fat, potassium, magnesium, calcium, sodium, iron, copper and chromium content and better cooking quality as compared to the other varieties. The study revealed that Nagadal variety was superior to other varieties with respect to mineral content, cooking and thermal properties and hence have better potential in the development of value added products.

  10. An overview of the sustainability of rice agroecosystem through rice-fish integration

    International Nuclear Information System (INIS)

    Ahyaudin Ali

    2002-01-01

    Rice-fish integration in the rice agroecosystem has been introduced and is expanding in Malaysia. This type of farm integration has resulted in land optimization, thus enabling farmers to grow both fish and rice in one farming system. Introducing fish into the ricefield has also increased seasonal income as well as reduced pesticide use. Although basic ecological knowledge on rice-fish integration has allowed rice-fish integration to be introduced, further research is required to allow for fine tuning of the methodologies used. Thus research on the ecology, management, production methods and the characterization of rice-fish farming system of Malaysia is needed. Further characterization and description is needed on the ecology of the rice-fish farming system of Malaysia in terms of production, food webs, nutrient flow and system diversity. To increase the sustainability efficiency and productivity of the system, implementation of management techniques formulated through research is required. (Author)

  11. Chemical diversity of essential oils from flowers,leaves,and stems of Rhanterium epapposum Oliv. growing in northern border region of Saudi Arabia

    Institute of Scientific and Technical Information of China (English)

    Marwa Awad; Abdelrhman Abdelwahab

    2016-01-01

    Objective:To evaluate the medicinal uses of Rhanterium epapposum Oliv.(R.epapposum) growing in northern border region of Saudi Arabia,through the chemical diversity of essential oils extracted from its flowers,leaves and stems.Methods:Aerial parts of R.epapposum were collected in April 2014.Air dried flowers,leaves,and stems were separately subjected to hydrodistillation in a Clevenger-type apparatus for 4 h to extract the essential oils.Gas chromatography-mass spectrometry analysis of the essential oils was carried out using an Agilent 6890 gas chromatograph equipped with an Agilent 5973 mass spectrometric detector.Results:A total of 51 compounds representing 76.35%–94.86% of flowers,leaves and stems oils composition were identified.The chemical profiles of the studied fractions revealed the dominance of monoterpenes,regardless of qualitative and quantitative differences observed.Limonene,linalool,4-terpineol and a-cadinol represented the major constituents of flowers oil.Leaves oil was dominated by limonene,sabinene,a-pinene and b-myrcene whereas linalool,ionole,a-cadinol,b-eudesmol,4-terpineol,and aterpineol were the major constituents of stems oil.Conclusions:Essential oils from flowers,leaves and stems of R.epapposum growing in northern border region of Saudi Arabia are considered as a rich source of monoterpenes which have biological activities.

  12. Micronutrient problems of crops in Pakistan with special reference to zinc and copper deficiency in rice production

    International Nuclear Information System (INIS)

    Chaudhry, F.M.; Sharif, M.

    1975-01-01

    Studies on the mechanisms of zinc-65 adsorption by various types of soil are being conducted. The soils of the Hyderabad region of the Sind province appear to de deficient in Zn for maize and in B for cotton, sweet clover, wheat and millets. Zinc, Cu and B deficiency seems to be widespread for wheat on many non-rice growing soils of the Punjab. In the North Frontier Province, sugarbeet and citrus orchards respond markedly to the application of Zn, Cu and Fe. Lowland rice responds to the addition of Zn in all the provinces of Pakistan. In rice tracts of the Punjab, Zn and Cu deficiency is quite prevalent for rice. The scope of necessary future research is discussed

  13. Adapting rice production to climate change for sustainable blue water consumption: an economic and virtual water analysis

    Science.gov (United States)

    Darzi-Naftchali, Abdullah; Karandish, Fatemeh

    2017-12-01

    Sustainable utilization of blue water resources under climate change is of great significance especially for producing high water-consuming crops in water-scarce regions. Based on the virtual water concept, we carried out a comprehensive field-modeling research to find the optimal agricultural practices regarding rice blue water consumption under prospective climate change. The DSSAT-CERES-Rice model was used in combination with 20 GCMs under three Representative Concentration Pathways of low (RCP2.6), intermediate (RCP4.6), and very high (RCP8.5) greenhouse concentrations to predict rice yield and water requirement and related virtual water and economic return for the base and future periods. The crop model was calibrated and validated based on the 2-year field data obtained from consolidated paddy fields of the Sari Agricultural Sciences and Natural Resources University during 2011 and 2012 rice cropping cycles. Climate change imposes an increase of 0.02-0.04 °C in air temperature which consequently shifts rice growing seasons to winter season, and shorten the length of rice physiological maturity period by 2-15 days. While rice virtual water reduces by 0.1-20.6% during 2011-2070, reduced rice yield by 3.8-22.6% over the late twenty-first century results in a considerable increase in rice virtual water. By increasing the contribution of green water in supplying crop water requirement, earlier cropping could diminish blue water consumption for rice production in the region while cultivation postponement increases irrigation water requirement by 2-195 m3 ha-1. Forty days delay in rice cultivation in future will result in 29.9-40.6% yield reduction and 43.9-60% increase in rice virtual water under different scenarios. Earlier cropping during the 2011-2040 and 2041-2070 periods would increase water productivity, unit value of water, and economic value of blue water compared to the base period. Based on the results, management of rice cultivation calendar is a

  14. [Nitrogen cycling in rice-duck mutual ecosystem during double cropping rice growth season].

    Science.gov (United States)

    Zhang, Fan; Chen, Yuan-Quan; Sui, Peng; Gao, Wang-Sheng

    2012-01-01

    Raising duck in paddy rice field is an evolution of Chinese traditional agriculture. In May-October 2010, a field experiment was conducted in a double cropping rice region of Hunan Province, South-central China to study the nitrogen (N) cycling in rice-duck mutual ecosystem during early rice and late rice growth periods, taking a conventional paddy rice field as the control. Input-output analysis method was adopted. The N output in the early rice-duck mutual ecosystem was 239.5 kg x hm(-2), in which, 12.77 kg x hm(-2) were from ducks, and the N output in the late rice-duck mutual ecosystem was 338.7 kg x hm(-2), in which, 23.35 kg x hm(-2) were from ducks. At the present N input level, there existed soil N deficit during the growth seasons of both early rice and late rice. The N input from duck sub-system was mainly from the feed N, and the cycling rate of the duck feces N recycled within the system was 2.5% during early rice growth season and 3.5% during late rice growth season. After late rice harvested, the soil N sequestration was 178.6 kg x hm(-2).

  15. Impact of Rice Paddy Areas Decrease on Local Climate over Taiwan

    Science.gov (United States)

    Lo, M. H.; Wen, W. H.; Chen, C. C.

    2014-12-01

    Agricultural irrigation practice is one of the important anthropogenic processes in the land surface modeling. Irrigation can decrease local surface temperature with alternating surface energy partitioning. Rice paddy is the major food crop in Asian monsoon region and rice is grown under flooded conditions during the growing season; hence, the rice paddy can be considered as an open water body, which has more impacts on the surface energy budget than other cropland does. In this study, we explore how the rice paddy area changes affect Taiwan's regional climate from both observational data and numerical modeling exercise. The Weather Research and Forecasting (WRF) model is utilized to explore impacts of rice paddy area changes on the regional climate, and energy and water budget changes. In addition, temperature datasets from six automatic weather stations in the northern Taiwan and two stations in the southern Taiwan are analyzed in this study to explore how the Daily Temperature Range (DTR) changes with the decreased rice paddy areas. Previous studies show that due to the urban heat island effect, aerosol direct and indirect effects, and global warming, the DTR has decreased in the past 4 decades observed from most of the weather stations around Taiwan. However, the declined rice paddy area may increase the DTR with higher Bowen ratio during the daytime. Preliminary results show that DTR is decreased in weather stations near the urban area, but increased in weather stations near fallow areas in the past 20 years. It shows that different land use changes may have opposite impacts on local and regional climate.

  16. DETERMINATION OF SPATIAL INTEGRATION AND SUBSTITUTION OF FOREIGN RICE FOR LOCAL RICE IN GHANA

    Directory of Open Access Journals (Sweden)

    Philip Kofi ADOM

    2014-11-01

    Full Text Available This study tested for spatial integration in the rice market and the substitution of imported rice for local rice in Ghana. It is established that the markets for domestic imported rice are well-integrated, but not complete. The imperfect spatial integration of domestic foreign rice markets implies that the market provides opportunities for arbitrage. Price leadership roles are found to be determined by the kind of sub-inter-regional-trade network defined. However, in all, the Accra market emerged as a dominant market leader in the domestic foreign rice market. There is evidence of significant regional substitution of foreign rice for local rice in the long run, but the result is mixed in the short run. The result that local rice is not a perfect substitute for imported rice implies that price disincentive measures such as increasing the import tariffs on foreign rice will only produce a mild effect on increasing the producer price faced by local rice farmers, but aggravate the burden on households’ budget.

  17. Detection of genomic deletions in rice using oligonucleotide microarrays

    Directory of Open Access Journals (Sweden)

    Bordeos Alicia

    2009-03-01

    database saturated with deletions across the rice genome. This community resource can continue to grow with further hybridizations, allowing researchers to quickly identify mutants that harbor deletions in candidate genomic regions, for example, regions containing QTL of interest.

  18. Influence of cooling rate on growth of Bacillus cereus from spore inocula in cooked rice, beans, pasta, and combination products containing meat or poultry

    Science.gov (United States)

    The objective of this study was to assess the ability of B. cereus spores to germinate and grow in order to determine a safe cooling rate for cooked rice, beans, and pasta, rice/chicken (4:1), rice/chicken/vegetables (3:1:1), rice/beef (4:1), and rice/beef/vegetables (3:1:1). Samples were inoculate...

  19. Soil quality assessment in rice production systems

    NARCIS (Netherlands)

    Rodrigues de Lima, A.C.

    2007-01-01

    In the state of Rio Grande do Sul, Brazil, rice production is one of the most important regional activities. Farmers are concerned that the land use practices for rice production in the Camaquã region may not be sustainable because of detrimental effects on soil quality. The study presented in this

  20. Spatiotemporal analysis the precipitation extremes affecting rice yield in Jiangsu province, southeast China

    Science.gov (United States)

    Huang, Jin; Islam, A. R. M. Towfiqul; Zhang, Fangmin; Hu, Zhenghua

    2017-10-01

    With the increasing risk of meteorological disasters, it is of great importance to analyze the spatiotemporal changes of precipitation extremes and its possible impact on rice productivity, especially in Jiangsu province, southeast China. In this study, we explored the relationships between rice yield and extreme precipitation indices using Mann-Kendall trend test, Pettitt's test, and K-means clustering methods. This study used 10 extreme precipitation indices of the rice growing season (May to October) based on the daily precipitation records and rice yield data at 52 meteorological stations during 1961-2012 in Jiangsu province. The main findings were as follows: (1) correlation results indicated that precipitation extremes occurred in the months of July, August, and October, which had noticeable adverse effects on rice yield; (2) the maximum 7-day precipitation of July and the number of rainy days of August and October should be considered as three key indicators for the precipitation-induced rice meteorological disasters; and (3) most of the stations showed an increasing trends for the maximum 7-day precipitation of July and the number of rainy days of August, while the number of rainy days of October in all the stations demonstrated a decreasing trend. Moreover, Jiangsu province could be divided into two major sub-regions such as north and south areas with different temporal variations in the three key indicators.

  1. Spatiotemporal analysis the precipitation extremes affecting rice yield in Jiangsu province, southeast China.

    Science.gov (United States)

    Huang, Jin; Islam, A R M Towfiqul; Zhang, Fangmin; Hu, Zhenghua

    2017-10-01

    With the increasing risk of meteorological disasters, it is of great importance to analyze the spatiotemporal changes of precipitation extremes and its possible impact on rice productivity, especially in Jiangsu province, southeast China. In this study, we explored the relationships between rice yield and extreme precipitation indices using Mann-Kendall trend test, Pettitt's test, and K-means clustering methods. This study used 10 extreme precipitation indices of the rice growing season (May to October) based on the daily precipitation records and rice yield data at 52 meteorological stations during 1961-2012 in Jiangsu province. The main findings were as follows: (1) correlation results indicated that precipitation extremes occurred in the months of July, August, and October, which had noticeable adverse effects on rice yield; (2) the maximum 7-day precipitation of July and the number of rainy days of August and October should be considered as three key indicators for the precipitation-induced rice meteorological disasters; and (3) most of the stations showed an increasing trends for the maximum 7-day precipitation of July and the number of rainy days of August, while the number of rainy days of October in all the stations demonstrated a decreasing trend. Moreover, Jiangsu province could be divided into two major sub-regions such as north and south areas with different temporal variations in the three key indicators.

  2. Transcriptome Analysis of Early Responsive Genes in Rice during Magnaporthe oryzae Infection

    Directory of Open Access Journals (Sweden)

    Yiming Wang

    2014-12-01

    Full Text Available Rice blast disease caused by Magnaporthe oryzae is one of the most serious diseases of cultivated rice (Oryza sativa L. in most rice-growing regions of the world. In order to investigate early response genes in rice, we utilized the transcriptome analysis approach using a 300 K tilling microarray to rice leaves infected with compatible and incompatible M. oryzae strains. Prior to the microarray experiment, total RNA was validated by measuring the differential expression of rice defense-related marker genes (chitinase 2, barwin, PBZ1, and PR-10 by RT-PCR, and phytoalexins (sakuranetin and momilactone A with HPLC. Microarray analysis revealed that 231 genes were up-regulated (>2 fold change, p < 0.05 in the incompatible interaction compared to the compatible one. Highly expressed genes were functionally characterized into metabolic processes and oxidation-reduction categories. The oxidative stress response was induced in both early and later infection stages. Biotic stress overview from MapMan analysis revealed that the phytohormone ethylene as well as signaling molecules jasmonic acid and salicylic acid is important for defense gene regulation. WRKY and Myb transcription factors were also involved in signal transduction processes. Additionally, receptor-like kinases were more likely associated with the defense response, and their expression patterns were validated by RT-PCR. Our results suggest that candidate genes, including receptor-like protein kinases, may play a key role in disease resistance against M. oryzae attack.

  3. Damage by Tibraca limbativentris Stål (Pentatomidae) to Upland Rice Cultivated in Amazon Rainforest Region (Brazil) at Different Growth Stages.

    Science.gov (United States)

    Krinski, D; Foerster, L A

    2017-02-01

    In this study, we evaluated the damage caused in the field by Tibraca limbativentris Stål adults at different levels of infestation (0, 1, 2, and 4 stink bugs) per three rice plants during three growth stages (V8, V13, and R4 stages) of upland rice cultivated in southwestern of Pará State, Amazon Rainforest region, Brazil. Heading time (panicle exertion) was affected by T. limbativentris infestations mainly in the vegetative stage and the whiteheads percentage in treatments ranged from 18.2 to 38%. The dead hearts percentages varied between 0 and 21.5%, and the mean number of primary branches (ramifications) ranged from 5.9 ± 0.4 to 12.3 ± 0.2. The number of empty spikelets was only affected in infestations with four insects/three plants, while the quantity of filled grains per panicle was affected only when infestations occurred during the vegetative stage. The total number of spikelets (filled + empty) per panicle decreased significantly in all phenological stages, and the percentage of damage ranged from 17 to 44% among treatments. Based on the proportion of damage observed, we suggest doubling the number of insects presently used as action threshold to 2 and 4 stink bugs per 15 stalks sampled for the vegetative stage, and of 1 or 2 stink bugs per 15 stalks sampled at the beginning of reproductive stage (R3/R4). Also, the field should be monitored during the entire vegetative stage, since most damage was observed in this phenological stage.

  4. Identification of quantitative trait loci for salinity tolerance in rice ...

    Indian Academy of Sciences (India)

    2016-12-05

    Dec 5, 2016 ... most serious biophysical constraints of rice production in many rice-producing areas ..... Thus, the large gaps in the chromosomal regions without ..... an elite maize population: I. Linkage analysis and determination of QTLs for.

  5. Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza).

    Science.gov (United States)

    Vigueira, Cynthia C; Small, Linda L; Olsen, Kenneth M

    2016-04-22

    The ability to grow in phosphorus-depleted soils is an important trait for rice cultivation in many world regions, especially in the tropics. The Phosphorus Starvation Tolerance 1 (PSTOL1) gene has been identified as underlying the ability of some cultivated rice varieties to grow under low-phosphorus conditions; however, the gene is absent from other varieties. We assessed PSTOL1 presence/absence in a geographically diverse sample of wild, domesticated and weedy rice and sequenced the gene in samples where it is present. We find that the presence/absence polymorphism spans cultivated, weedy and wild Asian rice groups. For the subset of samples that carry PSTOL1, haplotype sequences suggest long-term selective maintenance of functional alleles, but with repeated evolution of loss-of-function alleles through premature stops and frameshift mutations. The loss-of-function alleles have evolved convergently in multiple rice species and cultivated rice varieties. Greenhouse assessments of plant growth under low- and high-phosphorus conditions did not reveal significant associations with PSTOL1 genotype variation; however, the striking signature of balancing selection at this locus suggests that further phenotypic characterizations of PSTOL1 allelic variants is warranted and may be useful for crop improvement. These findings suggest balancing selection for both functional and non-functional PSTOL1 alleles that predates and transcends Asian rice domestication, a pattern that may reflect fitness tradeoffs associated with geographical variation in soil phosphorus content.

  6. SOIL N, P AND K CONCENTRATIONS AND RICE YIELD INCREASED DUE TO THE APPLICATION OF Azolla pinnata

    Directory of Open Access Journals (Sweden)

    A. Arivin Rivaie*

    2014-01-01

    Full Text Available Many studies showed that application of Azolla pinnata as biofertilizer improved soil fertility some agricultural crops, including rice, whereas farmers in Lampung consider that A. pinnata suppresses growth of rice seedlings, so they throw it field by raising irrigation water surface. Information on effects A. pinnata application on changes in nutrient availability and rice yield obtained from paddy fields of regions still rare. A study was carried out to investigate effects of different rates of A. pinnata on changes in N, P, K concentrations in paddy soils, N uptake, and rice yield. A well-irrigated paddy field was incorporated with A. pinnata, and then rice seedlings of Ciherang variety had been grown from June up to December 2009. Results: application of A. pinnata at dose of five t per ha increased concentration of N, P and K as well as rice yield. A. pinnata had a relatively high N content, ie 2.43 percent. Application of A. pinnata of 7.5 t per ha increased significantly available soil P, indicated that A. pinnata requires a fairly high P to grow optimally. Application of A. pinnata of 7.5 t per ha gave highest dry grain yield, suggests that application A. pinnata did not suppress rice yield, even use of A. pinnata as organic matter source will help to conserve fossil fuels and foreign exchange as well as will allow more paddy fields that can be fertilized by N.

  7. Physiological Age Status of Female Adults and Off-Season Survival of Rice Leaffolder Cnaphalocrocis medinalis in India

    Directory of Open Access Journals (Sweden)

    Padmavathi Chintalapati

    2015-09-01

    Full Text Available Rice leaffolder, Cnaphalocrocis medinalis, is one of the major foliage feeders found in the rice growing regions in India. When the crop was at maturity, numerous adults of rice leaffolder were found in the rice fields though the larval population gradually decreased, and no eggs were found on rice leaves. The population characteristics of C. medinalis were assessed based on the physiological age status of adults at different crop growth stages. Based on egg development within ovarioles, ovariole appearance, number and colour of fat bodies, and characteristics of bursa copulatrix, physiological age status of the adults was described, which served as a basis for the determination of age composition. C. medinalis adults were found during the first week of August on rice plants, of which 44% were in Age 0 with immature ovaries, indicating immigrants. However, 28% adults each were at Ages 1–2 with developing ovaries, indicating local breeding population. The carryover and off-season survival of C. medinalis were also studied to determine the contribution of the alternative hosts in the population growth that helped in devising efficient management strategies. Rice was the most preferred host followed by Triticum aestivum, Echinochloa crusgulli and Brachiaria plantaginea. Various routes of the carryover of C. medinalis from season to season were discussed.

  8. Effect of heavy haze and aerosol pollution on rice and wheat productions in China

    Science.gov (United States)

    Tie, Xuexi; Huang, Ru-Jin; Dai, Wenting; Cao, Junji; Long, Xin; Su, Xiaoli; Zhao, Shuyu; Wang, Qiyuan; Li, Guohui

    2016-07-01

    In China, regional haze pollution is a serious environmental problem. The impact on ecosystem, however, is not clearly understood. This study investigates the effect of regional haze pollution on the yields of rice and wheat in China. The spatial and temporal distributions of aerosol optical depth (AOD) show high particulate pollution in the North China Plain region, Yangtze River Delta region, the central eastern China, and the Si Chuan Basin, coexisted largely with crop growth in time and space. The solar irradiance reaching these regions is estimated to reduce by up to 28-49%, calculated using the AOD distributions and tropospheric ultraviolet-visible (TUV) model. Reduction of solar irradiance in these regions can depress optimal yields of about 45% of rice and 75% of wheat growth in China, leading to 2% reduction in total rice production and 8% reduction in total wheat production in China. However, there are large uncertainties of the estimate related to the diffuse solar radiation. For high diffuse radiation case, the estimate reductions of rice and wheat decrease to 1% and 4.5%, respectively. A further detailed study is needed to clearly understand this effect to meet the growing food demand in the nation in the coming decades.

  9. Interaction study of rice stripe virus proteins reveals a region of the nucleocapsid protein (NP) required for NP self-interaction and nuclear localization.

    Science.gov (United States)

    Lian, Sen; Cho, Won Kyong; Jo, Yeonhwa; Kim, Sang-Min; Kim, Kook-Hyung

    2014-04-01

    Rice stripe virus (RSV), which belongs to the genus Tenuivirus, is an emergent virus problem. The RSV genome is composed of four single-strand RNAs (RNA1-RNA4) and encodes seven proteins. We investigated interactions between six of the RSV proteins by yeast-two hybrid (Y2H) assay in vitro and by bimolecular fluorescence complementation (BiFC) in planta. Y2H identified self-interaction of the nucleocapsid protein (NP) and NS3, while BiFC revealed self-interaction of NP, NS3, and NCP. To identify regions(s) and/or crucial amino acid (aa) residues required for NP self-interaction, we generated various truncated and aa substitution mutants. Y2H assay showed that the N-terminal region of NP (aa 1-56) is necessary for NP self-interaction. Further analysis with substitution mutants demonstrated that additional aa residues located at 42-47 affected their interaction with full-length NP. These results indicate that the N-terminal region (aa 1-36 and 42-47) is required for NP self-interaction. BiFC and co-localization studies showed that the region required for NP self-interaction is also required for NP localization at the nucleus. Overall, our results indicate that the N-terminal region (aa 1-47) of the NP is important for NP self-interaction and that six aa residues (42-47) are essential for both NP self-interaction and nuclear localization. Copyright © 2014 Elsevier B.V. All rights reserved.

  10. Assessing the impacts of climate change on rice yields in the main rice areas of China

    Energy Technology Data Exchange (ETDEWEB)

    Yao, Fengmei [College of Earth Sciences, The Graduate University of the Chinese Academy of Sciences, 19A, Yuquan Road, Beijing, 100049 (China); Xu, Yinglong; Lin, Erda [Agricultural Environment and Sustainable Development Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081 (China); Yokozawa, Masayuki [National Institute for Agro-environmental Sciences, Tsukuba 305-8604 (Japan); Zhang, Jiahua [Chinese Academy of Meteorological Sciences, Beijing, 100081 (China)

    2007-02-15

    This paper assesses the impact of climate change on irrigated rice yield using B2 climate change scenario from the Regional Climate Model (RCM) and CERES-rice model during 2071--2090. Eight typical rice stations ranging in latitude, longitude, and elevation that are located in the main rice ecological zones of China are selected for impact assessment. First, Crop Estimation through Resource and Environment Synthesis (CERES)-rice model is validated using farm experiment data in selected stations. The simulated results represent satisfactorily the trend of flowering duration and yields. The deviation of simulation within {+-} 10% of observed flowering duration and {+-} 15% of observed yield. Second, the errors of the outputs of RCM due to the difference of topography between station point and grid point is corrected. The corrected output of the RCM used for simulating rice flowering duration and yield is more reliable than the not corrected. Without CO2 direct effect on crop, the results from the assessment explore that B2 climate change scenario would have a negative impact on rice yield at most rice stations and have little impacts at Fuzhou and Kunming. To find the change of inter-annual rice yield, a preliminary assessment is made based on comparative cumulative probability at low and high yield and the coefficient variable of yield between the B2 scenario and baseline. Without the CO2 direct effect on rice yield, the result indicates that frequency for low yield would increase and it reverses for high yield, and the variance for rice yield would increase. It is concluded that high frequency at low yield and high variances of rice yield could pose a threat to rice yield at most selected stations in the main rice areas of China. With the CO2 direct effect on rice yield, rice yield increase in all selected stations.

  11. Assessing the impacts of climate change on rice yields in the main rice areas of China

    International Nuclear Information System (INIS)

    Yao, Fengmei; Xu, Yinglong; Lin, Erda; Yokozawa, Masayuki; Zhang, Jiahua

    2007-01-01

    This paper assesses the impact of climate change on irrigated rice yield using B2 climate change scenario from the Regional Climate Model (RCM) and CERES-rice model during 2071--2090. Eight typical rice stations ranging in latitude, longitude, and elevation that are located in the main rice ecological zones of China are selected for impact assessment. First, Crop Estimation through Resource and Environment Synthesis (CERES)-rice model is validated using farm experiment data in selected stations. The simulated results represent satisfactorily the trend of flowering duration and yields. The deviation of simulation within ± 10% of observed flowering duration and ± 15% of observed yield. Second, the errors of the outputs of RCM due to the difference of topography between station point and grid point is corrected. The corrected output of the RCM used for simulating rice flowering duration and yield is more reliable than the not corrected. Without CO2 direct effect on crop, the results from the assessment explore that B2 climate change scenario would have a negative impact on rice yield at most rice stations and have little impacts at Fuzhou and Kunming. To find the change of inter-annual rice yield, a preliminary assessment is made based on comparative cumulative probability at low and high yield and the coefficient variable of yield between the B2 scenario and baseline. Without the CO2 direct effect on rice yield, the result indicates that frequency for low yield would increase and it reverses for high yield, and the variance for rice yield would increase. It is concluded that high frequency at low yield and high variances of rice yield could pose a threat to rice yield at most selected stations in the main rice areas of China. With the CO2 direct effect on rice yield, rice yield increase in all selected stations

  12. Comparison of Rice Direct Seeding Methods (Mechanical and Manual with Transplanting Method

    Directory of Open Access Journals (Sweden)

    A Eyvani

    2014-04-01

    Full Text Available The main method of rice planting in Iran is transplanting. Due to poor mechanization of rice production, this method is laborious and costly. The other method is direct seeding in wet lands which is performed in the one third of rice cultivation area of the world. The most important problem in this method is high labor requirement of weed control. In order to compare the different rice planting methods (direct drilling, transplanting, and seed broadcasting a manually operated rice direct seeder (drum seeder was designed and fabricated. The research was conducted using a randomized complete block design with three treatments and three replications. Required draft force, field efficiency, effective field capacity, yield, and yield components were measured and the treatments were compared economically. Results showed that there were significant differences among the treatments from the view point of rice yield at the confidence level of 95% i.e. the transplanting method had the maximum yield. A higher rice yield was obtained from the direct seeder compared to the manual broadcasting method but, the difference between these two methods for crop yield was not significant even at the confidence level of the 95%. The coefficient of variation of seed distribution with direct seeding was more than 20%. The labor and time requirements per hectare reduced to 7 and 20 times, respectively when comparing the newly designed direct seeder with the transplanting method. The direct seeding method had the highest benefit to cost ratio in spite of its lower yield. Therefore, this method could be recommended in the rice growing regions.

  13. Multisensor Capacitance Probes for Simultaneously Monitoring Rice Field Soil-Water- Crop-Ambient Conditions.

    Science.gov (United States)

    Brinkhoff, James; Hornbuckle, John; Dowling, Thomas

    2017-12-26

    Multisensor capacitance probes (MCPs) have traditionally been used for soil moisture monitoring and irrigation scheduling. This paper presents a new application of these probes, namely the simultaneous monitoring of ponded water level, soil moisture, and temperature profile, conditions which are particularly important for rice crops in temperate growing regions and for rice grown with prolonged periods of drying. WiFi-based loggers are used to concurrently collect the data from the MCPs and ultrasonic distance sensors (giving an independent reading of water depth). Models are fit to MCP water depth vs volumetric water content (VWC) characteristics from laboratory measurements, variability from probe-to-probe is assessed, and the methodology is verified using measurements from a rice field throughout a growing season. The root-mean-squared error of the water depth calculated from MCP VWC over the rice growing season was 6.6 mm. MCPs are used to simultaneously monitor ponded water depth, soil moisture content when ponded water is drained, and temperatures in root, water, crop and ambient zones. The insulation effect of ponded water against cold-temperature effects is demonstrated with low and high water levels. The developed approach offers advantages in gaining the full soil-plant-atmosphere continuum in a single robust sensor.

  14. FRUIT FLIES AND THEIR PARASITOIDS IN THE FRUIT GROWING REGION OF LIVRAMENTO DE NOSSA SENHORA, BAHIA, WITH RECORDS OF UNPRECEDENTED INTERACTIONS

    Directory of Open Access Journals (Sweden)

    SUZANY AGUIAR LEITE

    2017-10-01

    Full Text Available ABSTRACT Several fruit fly species (Diptera: Tephritidae and Lonchaeidae assume the status of primary pests in fruit trees grown in Brazil, causing direct production losses. The aims of the study were to know aspects of diversity of fruit flies and their parasitoids in the fruit growing region of Livramento de Nossa Senhora, Bahia. Fruit samples were collected from 19 plant species during November/2011 and June/2014. Infestation rates were calculated in pupae.kg-1 of fruit and pupae.fruit-1. The results indicate the occurrence of Anastrepha obliqua (Macquart, Ceratitis capitata (Wiedemann and Neosilba pendula (Bezzi. Plant species Anacardium occidentale, Averrhoa carambola, Carica papaya, Eugenia uniflora, Malpighia emarginata, Mangifera indica var. “Haden”, “Rosa” and “Tommy Atkins”, Opuntia ficus indica, Pereskia bahiensis, Psidium guajava, Spondias lutea, Spondias purpurea and Spondias tuberosa are hosts of fruit flies in the region. Unprecedented bitrophic relationships between P. bahiensis and C. capitata and Anastrepha sp. and between Opuntia ficus indica and C. capitata and A. obliqua were recorded. Unprecedented tritrophic relationship for the state of Bahia Averrhoa carambola and C. capitata and parasitoid of the Pteromalidae Family were also recorded. Tritrophic associations between M. indica var. “Tommy Atkins” and S. purpurea and A. obliqua and Doryctobracon areolatus; and between S. purpurea and A. obliqua and Utetes anastrephae were observed.

  15. A novel region-growing based semi-automatic segmentation protocol for three-dimensional condylar reconstruction using cone beam computed tomography (CBCT.

    Directory of Open Access Journals (Sweden)

    Tong Xi

    Full Text Available OBJECTIVE: To present and validate a semi-automatic segmentation protocol to enable an accurate 3D reconstruction of the mandibular condyles using cone beam computed tomography (CBCT. MATERIALS AND METHODS: Approval from the regional medical ethics review board was obtained for this study. Bilateral mandibular condyles in ten CBCT datasets of patients were segmented using the currently proposed semi-automatic segmentation protocol. This segmentation protocol combined 3D region-growing and local thresholding algorithms. The segmentation of a total of twenty condyles was performed by two observers. The Dice-coefficient and distance map calculations were used to evaluate the accuracy and reproducibility of the segmented and 3D rendered condyles. RESULTS: The mean inter-observer Dice-coefficient was 0.98 (range [0.95-0.99]. An average 90th percentile distance of 0.32 mm was found, indicating an excellent inter-observer similarity of the segmented and 3D rendered condyles. No systematic errors were observed in the currently proposed segmentation protocol. CONCLUSION: The novel semi-automated segmentation protocol is an accurate and reproducible tool to segment and render condyles in 3D. The implementation of this protocol in the clinical practice allows the CBCT to be used as an imaging modality for the quantitative analysis of condylar morphology.

  16. Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome.

    Directory of Open Access Journals (Sweden)

    Gopala Krishnan S

    Full Text Available BACKGROUND: Rice is a major source of human food with a predominantly Asian production base. Domestication involved selection of traits that are desirable for agriculture and to human consumers. Wild relatives of crop plants are a source of useful variation which is of immense value for crop improvement. Australian wild rices have been isolated from the impacts of domestication in Asia and represents a source of novel diversity for global rice improvement. Oryza rufipogon is a perennial wild progenitor of cultivated rice. Oryza meridionalis is a related annual species in Australia. RESULTS: We have examined the sequence of the genomes of AA genome wild rices from Australia that are close relatives of cultivated rice through whole genome re-sequencing. Assembly of the resequencing data to the O. sativa ssp. japonica cv. Nipponbare shows that Australian wild rices possess 2.5 times more single nucleotide polymorphisms than in the Asian wild rice and cultivated O. sativa ssp. indica. Analysis of the genome of domesticated rice reveals regions of low diversity that show very little variation (polymorphism deserts. Both the perennial and annual wild rice from Australia show a high degree of conservation of sequence with that found in cultivated rice in the same 4.58 Mbp region on chromosome 5, which suggests that some of the 'polymorphism deserts' in this and other parts of the rice genome may have originated prior to domestication due to natural selection. CONCLUSIONS: Analysis of genes in the 'polymorphism deserts' indicates that this selection may have been due to biotic or abiotic stress in the environment of early rice relatives. Despite having closely related sequences in these genome regions, the Australian wild populations represent an invaluable source of diversity supporting rice food security.

  17. Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome.

    Science.gov (United States)

    Krishnan S, Gopala; Waters, Daniel L E; Henry, Robert J

    2014-01-01

    Rice is a major source of human food with a predominantly Asian production base. Domestication involved selection of traits that are desirable for agriculture and to human consumers. Wild relatives of crop plants are a source of useful variation which is of immense value for crop improvement. Australian wild rices have been isolated from the impacts of domestication in Asia and represents a source of novel diversity for global rice improvement. Oryza rufipogon is a perennial wild progenitor of cultivated rice. Oryza meridionalis is a related annual species in Australia. We have examined the sequence of the genomes of AA genome wild rices from Australia that are close relatives of cultivated rice through whole genome re-sequencing. Assembly of the resequencing data to the O. sativa ssp. japonica cv. Nipponbare shows that Australian wild rices possess 2.5 times more single nucleotide polymorphisms than in the Asian wild rice and cultivated O. sativa ssp. indica. Analysis of the genome of domesticated rice reveals regions of low diversity that show very little variation (polymorphism deserts). Both the perennial and annual wild rice from Australia show a high degree of conservation of sequence with that found in cultivated rice in the same 4.58 Mbp region on chromosome 5, which suggests that some of the 'polymorphism deserts' in this and other parts of the rice genome may have originated prior to domestication due to natural selection. Analysis of genes in the 'polymorphism deserts' indicates that this selection may have been due to biotic or abiotic stress in the environment of early rice relatives. Despite having closely related sequences in these genome regions, the Australian wild populations represent an invaluable source of diversity supporting rice food security.

  18. Thermal conditions of the grape growing season within the North-Eastern steppe land of Ukraine (on the example of Kharkiv region

    Directory of Open Access Journals (Sweden)

    Борис Шуліка

    2016-10-01

    Full Text Available The article analyzes the results of the thermal conditions observations within the North-Eastern steppe land of Ukraine as one of the most important factors for successful cultivation of grapes, thus providing crop productivity. Considering the effect of thermal factors, it can be noted that the intensity and speed of life processes of plants are well- defined under temperature conditions only in the circumstances where other environmental factors are not limited. The thermal regime was initially taken into account in practice in XVII century. In XIX century the agro-climatic areas to grow grapes were determined in North-Eastern steppe land of Ukraine. Detailed studies of agro-climatic conditions of specific areas can more thoroughly to make conclusions and recommendations for the cultivation of grapes as a whole in the territory, and specifically in those areas were given. In studying the thermal balance of the territory the average and extreme temperature should be paid attention to. Characteristic features of the thermal regime are given in this paper based on the study of atmospheric phenomena, geomorphology and territories with radiation influence and water flow regime. Thermal treatment is subjected to anthropogenic influence, and in cultivating tenants can use appropriate agricultural practices (conceal bushes, warm soil and air, and even crops in protective ground, in greenhouses. Characteristically, technology of greenhouses growers is even used in Kherson region. These data can be used in neighborhood and the adjacent areas, especially they are useful for the practice of growing grapes. The possibility of successful cultivation of dozens of grape varieties in the North-Eastern steppe land of Ukraine has been well-grounded.

  19. Occupancy modeling reveals territory-level effects of nest boxes on the presence, colonization, and persistence of a declining raptor in a fruit-growing region.

    Directory of Open Access Journals (Sweden)

    Megan E Shave

    Full Text Available Nest boxes for predators in agricultural regions are an easily implemented tool to improve local habitat quality with potential benefits for both conservation and agriculture. The potential for nest boxes to increase raptor populations in agricultural regions is of particular interest given their positions as top predators. This study examined the effects of cherry orchard nest boxes on the local breeding population of a declining species, the American Kestrel (Falco sparverius, in a fruit-growing region of Michigan. During the 2013-2016 study, we added a total of 23 new nest boxes in addition to 24 intact boxes installed previously; kestrels used up to 100% of our new boxes each season. We conducted temporally-replicated surveys along four roadside transects divided into 1.6 km × 500 m sites. We developed a multi-season occupancy model under a Bayesian framework and found that nest boxes had strong positive effects on first-year site occupancy, site colonization, and site persistence probabilities. The estimated number of occupied sites increased between 2013 and 2016, which correlated with the increase in number of sites with boxes. Kestrel detections decreased with survey date but were not affected by time of day or activity at the boxes themselves. These results indicate that nest boxes determined the presence of kestrels at our study sites and support the conclusion that the local kestrel population is likely limited by nest site availability. Furthermore, our results are highly relevant to the farmers on whose properties the boxes were installed, for we can conclude that installing a nest box in an orchard resulted in a high probability of kestrels occupying that orchard or the areas adjacent to it.

  20. Occupancy modeling reveals territory-level effects of nest boxes on the presence, colonization, and persistence of a declining raptor in a fruit-growing region.

    Science.gov (United States)

    Shave, Megan E; Lindell, Catherine A

    2017-01-01

    Nest boxes for predators in agricultural regions are an easily implemented tool to improve local habitat quality with potential benefits for both conservation and agriculture. The potential for nest boxes to increase raptor populations in agricultural regions is of particular interest given their positions as top predators. This study examined the effects of cherry orchard nest boxes on the local breeding population of a declining species, the American Kestrel (Falco sparverius), in a fruit-growing region of Michigan. During the 2013-2016 study, we added a total of 23 new nest boxes in addition to 24 intact boxes installed previously; kestrels used up to 100% of our new boxes each season. We conducted temporally-replicated surveys along four roadside transects divided into 1.6 km × 500 m sites. We developed a multi-season occupancy model under a Bayesian framework and found that nest boxes had strong positive effects on first-year site occupancy, site colonization, and site persistence probabilities. The estimated number of occupied sites increased between 2013 and 2016, which correlated with the increase in number of sites with boxes. Kestrel detections decreased with survey date but were not affected by time of day or activity at the boxes themselves. These results indicate that nest boxes determined the presence of kestrels at our study sites and support the conclusion that the local kestrel population is likely limited by nest site availability. Furthermore, our results are highly relevant to the farmers on whose properties the boxes were installed, for we can conclude that installing a nest box in an orchard resulted in a high probability of kestrels occupying that orchard or the areas adjacent to it.

  1. Growing Pains

    CERN Multimedia

    Katarina Anthony

    2013-01-01

    Heat expands and cold contracts: it’s a simple thermodynamic rule. But when temperatures swing from 300 K to near-absolute zero, this rule can mean a contraction of more than 80 metres across the LHC’s 27-km-long cryogenic system. Keeping this growth in check are compensators (a.k.a. bellows), which shrink and stretch in response to thermodynamic changes. Leak tests and X-rays now underway in the tunnel have revealed that these “joints” might be suffering from growing pains…   This 25-μm weld crack is thought to be the cause of the helium leaks. Prior to the LS1 warm-up, CERN’s cryogenic experts knew of two points in the machine’s cryogenic distribution system that were leaking helium. Fortunately, these leaks were sufficiently small, confined to known sub-sectors of the cryogenic line and – with help from the vacuum team (TE-VSC) – could easily be compensated for. But as the machine warmed up f...

  2. Induction of Xa10-like Genes in Rice Cultivar Nipponbare Confers Disease Resistance to Rice Bacterial Blight.

    Science.gov (United States)

    Wang, Jun; Tian, Dongsheng; Gu, Keyu; Yang, Xiaobei; Wang, Lanlan; Zeng, Xuan; Yin, Zhongchao

    2017-06-01

    Bacterial blight of rice, caused by Xanthomonas oryzae pv. oryzae, is one of the most destructive bacterial diseases throughout the major rice-growing regions in the world. The rice disease resistance (R) gene Xa10 confers race-specific disease resistance to X. oryzae pv. oryzae strains that deliver the corresponding transcription activator-like (TAL) effector AvrXa10. Upon bacterial infection, AvrXa10 binds specifically to the effector binding element in the promoter of the R gene and activates its expression. Xa10 encodes an executor R protein that triggers hypersensitive response and activates disease resistance. 'Nipponbare' rice carries two Xa10-like genes in its genome, of which one is the susceptible allele of the Xa23 gene, a Xa10-like TAL effector-dependent executor R gene isolated recently from 'CBB23' rice. However, the function of the two Xa10-like genes in disease resistance to X. oryzae pv. oryzae strains has not been investigated. Here, we designated the two Xa10-like genes as Xa10-Ni and Xa23-Ni and characterized their function for disease resistance to rice bacterial blight. Both Xa10-Ni and Xa23-Ni provided disease resistance to X. oryzae pv. oryzae strains that deliver the matching artificially designed TAL effectors (dTALE). Transgenic rice plants containing Xa10-Ni and Xa23-Ni under the Xa10 promoter provided specific disease resistance to X. oryzae pv. oryzae strains that deliver AvrXa10. Xa10-Ni and Xa23-Ni knock-out mutants abolished dTALE-dependent disease resistance to X. oryzae pv. oryzae. Heterologous expression of Xa10-Ni and Xa23-Ni in Nicotiana benthamiana triggered cell death. The 19-amino-acid residues at the N-terminal regions of XA10 or XA10-Ni are dispensable for their function in inducing cell death in N. benthamiana and the C-terminal regions of XA10, XA10-Ni, and XA23-Ni are interchangeable among each other without affecting their function. Like XA10, both XA10-Ni and XA23-Ni locate to the endoplasmic reticulum (ER) membrane

  3. The use of induced mutation combined with crossing in high quality rice breeding

    Energy Technology Data Exchange (ETDEWEB)

    Do Huu At; Bui Huy Thuy; Nguyen Van Bich; Tran Duy Quy [Agricultural Genetics Institute, Division of Genetics and Hybrid Rice Technology, Hanoi (Viet Nam); Nguyen Minh Cong [Hanoi No. 1 Teacher Training Univ., Department of Genetics (Viet Nam)

    2001-03-01

    The high quality rice varieties: Tam thom mutant rice Var., DT17 rice Var, DT21 glutinous rice Var were formed by induced mutation combined with crossing. Tam thom mutant rice Var. lost photosensitivity, could be planted 2 crops/year. DT17 rice Var with high yielding capacity, suitable for growth on lowland in summer crop, is replacing step-by-step Moctuyen rice Var. in North Vietnam. DT21 glutinous rice Var. could be planted 2 crops/year and had short growth duration, average yield was 4.0-4.5 tons/ha. These three ones had good quality, soft and scent cooked rice, suitable for customers and export requirements. Tam thom mutant rice Var. DT17 rice Var., DT21 and glutinous rice Var. were adopted for regional production by Ministry of Agriculture and Rural Development and allowed to be in trial production. (author)

  4. The use of induced mutation combined with crossing in high quality rice breeding

    International Nuclear Information System (INIS)

    Do Huu At; Bui Huy Thuy; Nguyen Van Bich; Tran Duy Quy; Nguyen Minh Cong

    2001-01-01

    The high quality rice varieties: Tam thom mutant rice Var., DT17 rice Var, DT21 glutinous rice Var were formed by induced mutation combined with crossing. Tam thom mutant rice Var. lost photosensitivity, could be planted 2 crops/year. DT17 rice Var with high yielding capacity, suitable for growth on lowland in summer crop, is replacing step-by-step Moctuyen rice Var. in North Vietnam. DT21 glutinous rice Var. could be planted 2 crops/year and had short growth duration, average yield was 4.0-4.5 tons/ha. These three ones had good quality, soft and scent cooked rice, suitable for customers and export requirements. Tam thom mutant rice Var. DT17 rice Var., DT21 and glutinous rice Var. were adopted for regional production by Ministry of Agriculture and Rural Development and allowed to be in trial production. (author)

  5. Interaction of a gibberellin-induced factor with the upstream region of an alpha-amylase gene in rice aleurone tissue.

    OpenAIRE

    Ou-Lee, T M; Turgeon, R; Wu, R

    1988-01-01

    The interaction between the DNA sequences of an alpha-amylase (EC 3.2.1.1) gene and a tissue-specific factor induced in rice (Oryza sativa L.) aleurone tissue by gibberellin was studied. DNA mobility-shift during electrophoresis indicated that a 500-base-pair sequence (HS500) of a rice alpha-amylase genomic clone (OSamy-a) specifically interacted with a factor from gibberellin-induced rice aleurone tissue. The amount of complex formed between the HS500 DNA fragment and the gibberellin-induced...

  6. Levels of some heavy metals and nutritional compositions of cocoa beans from selected cocoa- growing areas in Ashanti and Western regions of Ghana

    International Nuclear Information System (INIS)

    Asante, Nnuro William

    2013-03-01

    In this study, the levels of six heavy metals namely: cadmium, lead, copper, manganese, iron and zinc were determined in cocoa beans from some cocoa-growing areas in the Western and Ashanti Regions of Ghana using atomic absorption spectroscopy. The metal levels in the cocoa beans from the Western Region, expressed in mg/ kg varied from 0.045 to 0.066 with mean value of 0.054 for cadmium, from 0.013 to 0.030 with mean value of 0.020 for lead, from 46.47 to 55.17 with mean value of 51.98 for copper, from 48.36 to 64.65 with mean value of 55.18 for manganese, from 43.80 to 53.11 with the mean value of 47.51 iron and from 43.04 to 52.06 with the mean value of 48.29 for zinc. Those of Ashanti Region ranged from 0.050 to 0.065 with the mean value of 0.056 for cadmium, from 0.014 to 0.020 with the mean value of 0.017 for lead, from 47.43 to 54.17 with the mean value of 49.10 for copper, from 47.15 to 57.34 with the mean value of 54.62 for manganese, from 50.23 to 63.87 with the mean value of 54.63 for iron and from 53.02 to 58.71 with the mean value of 56.49 for zinc. Upon proximate analyses of four of the samples chosen at random (two samples from each region), it was found that all the samples were of high fat and carbohydrate content. The percentages of fat were 45.52%, 43.85%, 45.57% and 36.72% in samples from Kasapen, Asampaneye, Bekwai and Juaso respectively. Those of carbohydrates were 32.56%, 32.08%, 31.62% and 42.88% in cocoa samples from Kasapen, Asempaneye, Bekwai and Juaso respectively. Levels of proteins were 14.34%, 13.97%, 13.74% and 13.91% in the samples from the towns as listed in the order above. The samples from Kasapen in the Western Region gave 3.15%, 3.40% and 1.03% for moisture, ash and fibre contents respectively. The moisture, ash and fibre content in samples from Asempaneye also in the Western Region were 4.39%, 3.69% and 1.02% respectively. Samples from Bekwai in the Ashanti Region gave 4.46%, 3.52% and1.09% for moisture, ash and fibre contents

  7. Impacts of climate change on paddy rice yield in a temperate climate.

    Science.gov (United States)

    Kim, Han-Yong; Ko, Jonghan; Kang, Suchel; Tenhunen, John

    2013-02-01

    The crop simulation model is a suitable tool for evaluating the potential impacts of climate change on crop production and on the environment. This study investigates the effects of climate change on paddy rice production in the temperate climate regions under the East Asian monsoon system using the CERES-Rice 4.0 crop simulation model. This model was first calibrated and validated for crop production under elevated CO2 and various temperature conditions. Data were obtained from experiments performed using a temperature gradient field chamber (TGFC) with a CO2 enrichment system installed at Chonnam National University in Gwangju, Korea in 2009 and 2010. Based on the empirical calibration and validation, the model was applied to deliver a simulated forecast of paddy rice production for the region, as well as for the other Japonica rice growing regions in East Asia, projecting for years 2050 and 2100. In these climate change projection simulations in Gwangju, Korea, the yield increases (+12.6 and + 22.0%) due to CO2 elevation were adjusted according to temperature increases showing variation dependent upon the cultivars, which resulted in significant yield decreases (-22.1% and -35.0%). The projected yields were determined to increase as latitude increases due to reduced temperature effects, showing the highest increase for any of the study locations (+24%) in Harbin, China. It appears that the potential negative impact on crop production may be mediated by appropriate cultivar selection and cultivation changes such as alteration of the planting date. Results reported in this study using the CERES-Rice 4.0 model demonstrate the promising potential for its further application in simulating the impacts of climate change on rice production from a local to a regional scale under the monsoon climate system. © 2012 Blackwell Publishing Ltd.

  8. AUTOMATIC LUNG NODULE SEGMENTATION USING AUTOSEED REGION GROWING WITH MORPHOLOGICAL MASKING (ARGMM AND FEATURE EX-TRACTION THROUGH COMPLETE LOCAL BINARY PATTERN AND MICROSCOPIC INFORMATION PATTERN

    Directory of Open Access Journals (Sweden)

    Senthil Kumar

    2015-04-01

    Full Text Available An efficient Autoseed Region Growing with Morphological Masking(ARGMM is imple-mented in this paper on the Lung CT Slice to segment the 'Lung Nodules',which may be the potential indicator for the Lung Cancer. The segmentation of lung nodules car-ried out in this paper through Multi-Thresholding, ARGMM and Level Set Evolution. ARGMM takes twice the time compared to Level Set, but still the number of suspected segmented nodules are doubled, which make sure that no potential cancerous nodules go unnoticed at the earlier stages of diagnosis. It is very important not to panic the patient by finding the presence of nodules from Lung CT scan. Only 40 percent of nod-ules can be cancerous. Hence, in this paper an efficient Shape and Texture analysis is computed to quantitatively describe the segmented lung nodules. The Frequency spectrum of the lung nodules is developed and its frequency domain features are com-puted. The Complete Local binary pattern of lung nodules is computed in this paper by constructing the combine histogram of Sign and Magnitude Local Binary Patterns. Lo-cal Configuration Pattern is also determined in this work for lung nodules to numeri-cally model the microscopic information of nodules pattern.

  9. Analysis of the Economic Potential for a Mercosur Rice Futures Market

    OpenAIRE

    Waldemar Antonio da Rocha de Souza; João Gomes Martines-Filho; Claudio Zancan; Antonio Carlos Silva Costa; Andreza Galindo Alves de Queiróz

    2015-01-01

    World rice production reached 488.4 thousand tons, in 2012. Asian countries are the world’s largest rice producers, followed by Latinamerica, particularly Brazil, where rice is a basic food item. In spite of the clear economic benefits bestowed by commodity futures markets, neither Asia nor Mercosur have implemented a regional rice futures market. In sum, we propose to investigate the feasibility of a Brazilian rice futures contract to serve the Mercosur region by estimating Me...

  10. Labelling of rice seedlings and rice plants with 32P

    International Nuclear Information System (INIS)

    Achmad Nasroh, K.

    1989-01-01

    Labelling of rice seedlings and rice plants with 32 P. Labelled rice seedlings can be used to tag insect pests that feed on. Radioactivity counting of 32 P in the endosperm and in the shoot of rice seeds that soaked for 72 hours in KH 2 32 PO 4 solution of 1 μCi/ml were 29,300 and 9,500 cpm respectively. When these labelled seedlings were grown in unlabelled medium the radioactivity in the shoot increased. It was due to the 32 P that was translocated to the shoot from the endosperm. The 32 P translocation reached maximum about one week after the seedling were grown in the unlabelled medium. Labelled seedlings could also be produced by growing 5, 10 and 15 days old seedlings hydroponically in Kimura B solution containing 32 P. Ten days after growing, the radioactivity concentration of the seedlings stem reached about 115,000; 85,000 and 170,000 cpm/mg dry weight for the 5, 10 and 15 days old seedlings respectively. For the implementation of this method, 20 ml labelled Kimura B was needed for labelling of one seedling. The seedlings should be prepared in tap water. During the growth the 32 P in the labelled seedlings was distributed throughout the plant, so that new leaves and tillers became also radioactive. (author). 5 refs

  11. Extracting silica from rice husk treated with potassium permanganate

    International Nuclear Information System (INIS)

    Javed, S.H.; Naveed, S.

    2008-01-01

    As an agro-waste material the rice husk is abundantly available is rice growing areas. In many areas rice husk after burning involves disposal problems because of higher quantities of silica present in it. Rice husk contains about 20 per cent silica, which is present in hydrated amorphous form. On thermal treatment the silica converts into crystobalite, which is a crystalline form of silica. However amorphous silica can be produced under controlled conditions ensuring high reactivity and large surface area. Leaching the rice husk with organic acids and alkalies removes the metallic impurities from its surface. How a dilute solution of potassium permanganate affects the rice husk is the subject of this research paper. The rice husk was treated with the dilute solution of potassium permanganate at room temperature and then analyzed by SEM, TGA and the ash by analytical treatment after burning under controlled temperature. The SEM results revealed that the protuberances of the rice husk were eaten away by the solution of potassium permanganate. Pyrolysis of rice husks showed that the thermal degradation of the treated rice husk was faster than the untreated rice husk where as analytical results confirmed the presence of more amorphous silica than untreated rice husk. (author)

  12. Energy and Standardized Ileal Amino Acid Digestibilities of Chinese Distillers Dried Grains, Produced from Different Regions and Grains Fed to Growing Pigs

    Directory of Open Access Journals (Sweden)

    P. C. Xue

    2012-01-01

    Full Text Available Two experiments were conducted to determine the digestibility of crude protein (CP, amino acids and energy in three Chinese corn distillers dried grains with solubles (DDGS, one rice DDGS, one American corn DDGS and one American high protein distillers dried grains (HP-DDG. In Exp. 1, the apparent ileal digestibility (AID and standardized ileal digestibility (SID of CP and amino acids in the six samples were determined using cannulated barrows (initial BW: 43.3±1.7 kg. In Exp. 2, the digestible energy (DE and metabolizable energy (ME content of these six samples were determined using crossbred barrows (initial BW: 46.0±2.5 kg. The results of the two experiments indicated that Chinese corn DDGS is generally similar to American DDGS in chemical composition, digestibility of amino acids, DE and ME. However, Chinese DDGS had a lower Lys concentration (0.50% vs. 0.74% and SID Lys (52.3% vs. 57.0%, p<0.01. The DE and ME values in Chinese corn DDGS were 3,427 and 3,306 kcal/kg, respectively. Rice DDGS had a similar DE and ME (3,363 and 3,228 kcal/kg but higher Lys concentration (0.64% vs. 0.50% to corn DDGS, while the SID of Lys was quite low (61.8%, p<0.01. HP-DDG had high value of SID of Lys, DE and ME (79.8%, 3,899 and 3,746 kcal/kg. In conclusion, except for a lower Lys concentrations and availability, the chemical composition, digestibility of amino acids, DE and ME values in Chinese corn DDGS are similar to American corn DDGS. Additionally, the rice DDGS had lower Lys content and digestible Lys values than that in corn DDGS. Thirdly, HP-DDG has higher levels of digestible amino acids and energy than DDGS.

  13. The use of mutant stock for semi-dwarf plant type and early maturity as cross-breeding materials in rice (coordinated programme on semi-dwarf mutants for rice improvement in Asia and the Pacific Region - RCA)

    International Nuclear Information System (INIS)

    Pookamana, P.

    1985-11-01

    Development of semi-dwarf type varieties has led to a substantial yield increase in Thailand, where rice is cultivated on areas of about 8 million hectars. Of 19 recommended Thai rice varieties, 10 possess the DGWG gene which determines semi-dwarf character. This situation can create some problems in terms of genetic vulnerability towards pests, diseases and other adverse stresses. The authors found that susceptibility to disease and insect pests as well as poor grain quality are major drawbacks associated with the DGWG gene. With this background, the major project goal was to obtain, by mutation techniques, a new genetic source of semi-dwarfness. For this purpose 3 tall local Thai varieties (Leaung Awn 29, Niaw Sanpah Tawng and Khao Dawk Mali) with very good grain quality, were chosen as parent material. Using radiation techniques 2 glutinous and 7 non-glutinous semi-dwarf mutants were obtained. Results of agronomic trials indicated that the mutants from local varieties were more promising and higher yielding in comparison to introduced varieties from IRRI, Taiwan, China, France and the USA. The preliminary genetics analysis of these mutants indicated an allelic relationship to the DGWG gene. This result is very important for the rice breeding programme because it made available the semi-dwarf gene in a new genetic background - with desirable characteristics for cultivation in Thailand. These positive results stimulated efforts to obtain new semi-dwarf mutants from other local, lowland rice varieties such as Leaung Tawang and Leb Mue Nahng 111. 49 and 35 semi-dwarf mutants were already selected after irradiation and are now under agronomic evaluation

  14. PhosphoRice: a meta-predictor of rice-specific phosphorylation sites

    Directory of Open Access Journals (Sweden)

    Que Shufu

    2012-02-01

    Full Text Available Abstract Background As a result of the growing body of protein phosphorylation sites data, the number of phosphoprotein databases is constantly increasing, and dozens of tools are available for predicting protein phosphorylation sites to achieve fast automatic results. However, none of the existing tools has been developed to predict protein phosphorylation sites in rice. Results In this paper, the phosphorylation site predictors, NetPhos 2.0, NetPhosK, Kinasephos, Scansite, Disphos and Predphosphos, were integrated to construct meta-predictors of rice-specific phosphorylation sites using several methods, including unweighted voting, unreduced weighted voting, reduced unweighted voting and weighted voting strategies. PhosphoRice, the meta-predictor produced by using weighted voting strategy with parameters selected by restricted grid search and conditional random search, performed the best at predicting phosphorylation sites in rice. Its Matthew's Correlation Coefficient (MCC and Accuracy (ACC reached to 0.474 and 73.8%, respectively. Compared to the best individual element predictor (Disphos_default, PhosphoRice archieved a significant increase in MCC of 0.071 (P Conclusions PhosphoRice is a powerful tool for predicting unidentified phosphorylation sites in rice. Compared to the existing methods, we found that our tool showed greater robustness in ACC and MCC. PhosphoRice is available to the public at http://bioinformatics.fafu.edu.cn/PhosphoRice.

  15. Growing Region Segmentation Software (GRES) for quantitative magnetic resonance imaging of multiple sclerosis: intra- and inter-observer agreement variability: a comparison with manual contouring method

    International Nuclear Information System (INIS)

    Parodi, Roberto C.; Sardanelli, Francesco; Renzetti, Paolo; Rosso, Elisabetta; Losacco, Caterina; Ferrari, Alessandra; Levrero, Fabrizio; Pilot, Alberto; Inglese, Matilde; Mancardi, Giovanni L.

    2002-01-01

    Lesion area measurement in multiple sclerosis (MS) is one of the key points in evaluating the natural history and in monitoring the efficacy of treatments. This study was performed to check the intra- and inter-observer agreement variability of a locally developed Growing Region Segmentation Software (GRES), comparing them to those obtained using manual contouring (MC). From routine 1.5-T MRI study of clinically definite multiple sclerosis patients, 36 lesions seen on proton-density-weighted images (PDWI) and 36 enhancing lesion on Gd-DTPA-BMA-enhanced T1-weighted images (Gd-T1WI) were randomly chosen and were evaluated by three observers. The mean range of lesion size was 9.9-536.0 mm 2 on PDWI and 3.6-57.2 mm 2 on Gd-T1WI. The median intra- and inter-observer agreement were, respectively, 97.1 and 90.0% using GRES on PDWI, 81.0 and 70.0% using MC on PDWI, 88.8 and 80.0% using GRES on Gd-T1WI, and 85.8 and 70.0% using MC on Gd-T1WI. The intra- and inter-observer agreements were significantly greater for GRES compared with MC (P<0.0001 and P=0.0023, respectively) for PDWI, while no difference was found between GRES an MC for Gd-T1WI. The intra-observer variability for GRES was significantly lower on both PDWI (P=0.0001) and Gd-T1WI (P=0.0067), whereas for MC the same result was found only for PDWI (P=0.0147). These data indicate that GRES reduces both the intra- and the inter-observer variability in assessing the area of MS lesions on PDWI and may prove useful in multicentre studies. (orig.)

  16. Aquatic insect populations in the MUDA rice agroecosystem

    International Nuclear Information System (INIS)

    Rozilah Ismail; Ahyaudin Ali

    2002-01-01

    Periodic sampling of aquatic insects was carried out in an experimental plot of the Muda rice agroecosystem. The study which was conducted from August to December 1995, investigated the impact of the pesticides Broadox and Trebon on aquatic insect populations during the rice growing period. The results indicated that there was no significant difference in abundance and diversity of aquatic insects between the treated and non-treated area. The four dominant aquatic insects were from the families; Chironomidae, Dysticidae, Corixidae and Belostomatidae. Water temperature and dissolved oxygen showed changes throughout the rice growing season and the values of these parameters decreased gradually towards the end of the rice growing season in January when the rice plants were maturing. (Author)

  17. Combined effects of lanthanum (III) chloride and acid rain on photosynthetic parameters in rice.

    Science.gov (United States)

    Wang, Lihong; Wang, Wen; Zhou, Qing; Huang, Xiaohua

    2014-10-01

    Rare earth elements (REEs) pollution and acid rain are environmental issues, and their deleterious effects on plants attract worldwide attention. These two issues exist simultaneously in many regions, especially in some rice-growing areas. However, little is known about the combined effects of REEs and acid rain on plants. Here, the combined effects of lanthanum chloride (LaCl3), one type of REE salt, and acid rain on photosynthesis in rice were investigated. We showed that the combined treatment of 81.6 μM LaCl3 and acid rain at pH 4.5 increased net photosynthetic rate (Pn), stomatic conductance (Gs), intercellular CO2 concentration (Ci), Hill reaction activity (HRA), apparent quantum yield (AQY) and carboxylation efficiency (CE) in rice. The combined treatment of 81.6 μM LaCl3 and acid rain at pH 3.5 began to behave toxic effects on photosynthesis (decreasing Pn, Gs, HRA, AQY and CE, and increasing Ci), and the maximally toxic effects were observed in the combined treatment of 2449.0 μM LaCl3 and acid rain at pH 2.5. Moreover, the combined effects of LaCl3 and acid rain on photosynthesis in rice depended on the growth stage of rice, with the maximal effects occurring at the booting stage. Furthermore, the combined treatment of high-concentration LaCl3 and low-pH acid rain had more serious effects on photosynthesis in rice than LaCl3 or acid rain treatment alone. Finally, the combined effect of LaCl3 and acid rain on Pn in rice resulted from the changes in stomatic (Gs, Ci) and non-stomatic (HRA, AQY and CE) factors. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Spatial variability in soil properties and diagnostic leaf characteristics of apple (Malus domestica) in apple growing region of Dheerkot Azad Jammu and Kashmir (AJK), Pakistan

    International Nuclear Information System (INIS)

    Arjumend, T.; Abbasi, M. K.

    2016-01-01

    Scientific information on the spatial variability in soil properties and nutrient status is important for understanding ecosystem processes and evaluating agricultural land management practices. This study aims to characterize the spatial variation of selected soil properties and the nutrient status of ten representative sites of apple growing region, and also to evaluate the nutrient contents of apple leaves of the same sites from sub-division Dheerkot, Azad Jammu and Kashmir, (AJK) Pakistan. The sampling sites were: Hill, Chamankot, Chamyati-1 (upper), Chamyati-2 (lower), Dheerkot, Kotli, Karry, Sanghar, Neelabut, and Hanschoki. The treatments included; sites = 10; depths = 04 (0-15, 15-30, 30-45, and 45-60 cm) with 3 replications. Results indicated that texture of all the sites (except one) were loam or clay loam having silt and clay the dominant soil fractions. The soils were neutral to slightly alkaline, pH ranging from 7.2 to 8.3, non-saline, and moderately calcareous (CaCO/sub 3/ 0.00-8.97 percent). The nutrient index (NI) value for soil organic matter (SOM), available P and K were 2.5, 1.5 and 2.1 showing high, medium, and medium range, respectively. The concentration of AB-DTPA extractable Fe, Mn, Cu, and Zn showed high levels of Fe (10.2-16.8 mg kg-1) and Mn (0.90-2.71 mg kg/sup -1/) while Zn (0.42-2.31 mg kg/sup -1/) deficiency was observed in few samples. All the sites were severely deficient in Cu concentration (1.35-2.05 mg kg/sup -1/). The diagnosis of apples leaves indicated that none of the samples was deficient in N (2.30-3.49 percent) and P (0.13-0.33 percent) while out of ten sites, nine sites showed severe deficiency of K (0.85-1.40 percent). The study demonstrated a significant variation in different physico-chemical properties of the soils collected from the same ecological region. In order to overcome the deficiency of some of the nutrients observed both in soil and plant samples, proper fertilization especially the use of organic manures is

  19. Impact of land fragmentation on rice producers' technical efficiency in South-East China

    NARCIS (Netherlands)

    Tan, S.; Heerink, N.; Kuyvenhoven, A.; Qu Futian, F.

    2010-01-01

    Rice farming is important for income generation in large parts of China and Asia. This paper uses detailed household, crop- and plot-level data to investigate the levels and determinants of rice producers’ technical efficiency for three villages with different characteristics in a major rice-growing

  20. Efficiency in rice production : evidence from gogounou district in ...

    African Journals Online (AJOL)

    Thetechnical, allocative and economic efficiencies of rice growing in the District of Gogonou and factors determining the economic efficiency have been analysed with the help of a survey carried out among 150 rice producers randomly sampled during the agricultural year 2005-2006. The data analysis is essentially based ...

  1. Rice bran phytochemicals and dietary colon chemoprevention teamwork

    Science.gov (United States)

    A growing body of evidence supports that dietary rice bran exhibits gastrointestinal cancer control and prevention activity using carcinogen induced animal models and human colon cancer cell lines. Our laboratory has recently reported metabolomic differences in rice from globally and genetically dis...

  2. Comparative nutritional evaluation of fungus and alkali treated rice ...

    African Journals Online (AJOL)

    Feeding trial was conducted with growing white albino rats (Rattus norvegicus) for 56 days to determine whether alkali (NaOH) or fungus (Mushroom) treatment of rice husk would affect rat's performance. The treated rice husk comprised 10% of the rat's diets, the rests of which were 50% maize, 20% soybeans, 19% ...

  3. AFLP-Based Analysis of Genetic Diversity, Population Structure, and Relationships with Agronomic Traits in Rice Germplasm from North Region of Iran and World Core Germplasm Set.

    Science.gov (United States)

    Sorkheh, Karim; Masaeli, Mohammad; Chaleshtori, Maryam Hosseini; Adugna, Asfaw; Ercisli, Sezai

    2016-04-01

    Analysis of the genetic diversity and population structure of crops is very important for use in breeding programs and for genetic resources conservation. We analyzed the genetic diversity and population structure of 47 rice genotypes from diverse origins using amplified fragment length polymorphism (AFLP) markers and morphological characters. The 47 genotypes, which were composed of four populations: Iranian native varieties, Iranian improved varieties, International Rice Research Institute (IRRI) rice varieties, and world rice collections, were analyzed using ten primer combinations. A total of 221 scorable bands were produced with an average of 22.1 alleles per pair of primers, of which 120 (54.30%) were polymorphic. The polymorphism information content (PIC) values varied from 0.32 to 0.41 with an average of 0.35. The high percentage of polymorphic bands (%PB) was found to be 64.71 and the resolving power (R p) collections were 63.36. UPGMA clustering based on numerical data from AFLP patterns clustered all 47 genotypes into three large groups. The genetic similarity between individuals ranged from 0.54 to 0.94 with an average of 0.74. Population genetic tree showed that Iranian native cultivars formed far distant cluster from the other populations, which may indicate that these varieties had minimal genetic change over time. Analysis of molecular variance (AMOVA) revealed that the largest proportion of the variation (84%) to be within populations showing the inbreeding nature of rice. Therefore, Iranian native varieties (landraces) may have unique genes, which can be used for future breeding programs and there is a need to conserve this unique diversity. Furthermore, crossing of Iranian genotypes with the genetically distant genotypes in the other three populations may result in useful combinations, which can be used as varieties and/or lines for future rice breeding programs.

  4. Indica rice (Oryza sativa, BR29 and IR64).

    Science.gov (United States)

    Datta, Karabi; Datta, Swapan Kumar

    2006-01-01

    Rice is the world's most important food crop. Indica-type rice provides the staple food for more than half of the world population. To satisfy the growing demand of the ever-increasing population, more sustained production of indica-type rice is needed. In addition, because of the high per capita consumption of indica rice, improvement of any traits including its nutritive value may have a significant positive health outcome for the rice-consuming population. Rice yield productivity is greatly affected by different biotic stresses, like diseases and insect pests, and abiotic stresses like drought, cold, and salinity. Attempts to improve resistance in rice to these stresses by conventional breeding through introgression of traits have limited success owing to a lack of resistance germplasm in the wild relatives. Gene transfer technology with genes from other sources can be used to make rice plants resistant or tolerant to insect pests, diseases, and different environmental stresses. For improving the nutritional value of the edible endosperm part of the rice, genes for increasing iron, beta-carotene, or better quality protein can be introduced in rice plants by genetic engineering. Different crops have been transformed using various gene transfer methods, such as protoplast transformation, biolistic, and Agrobacterium-mediated transformation. This chapter describes the Agrobacterium-mediated transformation protocol for indica-type rice. The selectable marker genes used are hygromycin phosphotransferase (hpt), neomycin phosphotransferase (nptII), or phosphomannose isomerase (pmi), and, accordingly, the selection agents are hygromycin, kanamycin (G418), or mannose, respectively.

  5. Automated rice leaf disease detection using color image analysis

    Science.gov (United States)

    Pugoy, Reinald Adrian D. L.; Mariano, Vladimir Y.

    2011-06-01

    In rice-related institutions such as the International Rice Research Institute, assessing the health condition of a rice plant through its leaves, which is usually done as a manual eyeball exercise, is important to come up with good nutrient and disease management strategies. In this paper, an automated system that can detect diseases present in a rice leaf using color image analysis is presented. In the system, the outlier region is first obtained from a rice leaf image to be tested using histogram intersection between the test and healthy rice leaf images. Upon obtaining the outlier, it is then subjected to a threshold-based K-means clustering algorithm to group related regions into clusters. Then, these clusters are subjected to further analysis to finally determine the suspected diseases of the rice leaf.

  6. Managing flood prone ecosystem for rice production in Bihar plains

    International Nuclear Information System (INIS)

    Khan, A.R.; Singh, S.S.

    2002-06-01

    A large area of the eastern region especially Bihar (0.5 million hectare) faces flood submergence and/or drought every year which creates an unfavorable environment for crop production. In this ecosystem only flood prone rice is grown whose cultivation is entirely different than normal rice crop. Managing the flood prone ecosystem for rice production needs to evaluate the reasons and a comprehensive appropriate technology through research efforts for better rice production under such harsh ecology. An attempt was made to develop a suitable agronomic package for rice cultivation during and after flooding in flood prone plains of Bihar. (author)

  7. Defined fungal starter granules for purple glutinous rice wine

    OpenAIRE

    Ngo Thi Phuong Dung, N.T.P.

    2004-01-01

    The Mekong Delta region ofSouth Vietnamis particularly known as a production area of purple glutinous rice wine ( RuouNepThan ). The latter differs from regular rice wine for its sherry-like taste and flavour and its attractive brown-red colour. Wine is made from purple glutinous rice at home or by small cottage industries, by washing, soaking, steam-cooking, cooling and inoculation of the cooled rice with powdered rice-wine starter ( Men ). The fermentation takes place in two stages, i.e. an...

  8. Morphological description and DNA barcoding study of sand rice (Agriophyllum squarrosum, Chenopodiaceae) collected in Kazakhstan.

    Science.gov (United States)

    Genievskaya, Yuliya; Abugalieva, Saule; Zhubanysheva, Aibatsha; Turuspekov, Yerlan

    2017-11-14

    Sand rice (Agriophyllum squarrosum (L.) Moq.) is an annual shrub-like plant adapted to the mobile sand dunes in desert and semi-desert regions of Asia. It has a balanced nutrient composition with relatively high concentration of lipids and proteins, which results in its nutrition being similar to legumes. Sand rice's proteins contain the full range of essential amino acids. However, calories content is more similar to wheat. These features together with desert stress resistance make sand rice a potential food crop resilient to ongoing climate change. It is also an important fodder crop (on young stages of growth) for cattle in arid regions of Kazakhstan. In our work, sand rice samples were collected from two distant regions of Kazakhstan as a part of the nation-wide project to determine genetic variation of the native flora. Samples were collected in western and southeastern parts of Kazakhstan separated by distances of up to 1300 km. Sequences of the nuclear ribosomal DNA ITS1-5.8S-ITS2 region and the chloroplast matK gene confirmed the identity of species defined by morphological traits. Comparison with GenBank sequences revealed polymorphic sequence positions among Kazakh populations and GenBank references, and suggested a distinction among local populations of sand rice. The phylogenetic analysis of nucleotide sequences showed a clear partition of A. squarrosum (L.) Moq. from Agriophyllum minus Fisch. & C.A. Mey, which grows in the same sand dunes environment. DNA barcoding analyses of ITS and matK sequences showed a segregation of A. squarrosum from A. minus into separate clades in Maximum-Likelhood dendrograms. ITS analysis can be successfully used to characterize A. squarrosum populations growing quite distant from each other. The data obtained in this work provide the basis for further investigations on A. squarrosum population structure and may play a role in the screening of sand rice plants growing in desert and semi-desert environments of Central Asia

  9. DIFFUSION AND ADOPTION OF NEW RICE VARIETIES FOR AFRICA

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    Saharan Africa (SSA). It is ranked ... cultivated, rice is the most rapidly growing food .... population. Another parameter of interest is the average treatment effect on the treated, commonly denoted as ATE1 or ATT (Wooldridge, 2002, chapter 18).

  10. Economic and Environmental Impacts of Adoption of Genetically Modified Rice in California

    OpenAIRE

    Bond, Craig A.; Carter, Colin A.; Farzin, Y. Hossein

    2005-01-01

    Rice production in California is intensive in input usage. Weed resistance has led to growing chemical usage and has raised costs for many rice producers in California. In recent years, widespread adoption of genetically modified (GM) soybeans, corn, canola, and cotton has provided growers of those crops with new production alternatives that reduce chemical usage. But GM rice has not yet been approved for commercial production in California or elsewhere. One reason that GM rice production has...

  11. Rice as self: food, history and nation-building in Japan and Malaysia

    OpenAIRE

    Bray, Francesca

    2014-01-01

    Wherever rice is the traditional staple, people assume that eating rice, or growing rice, makes them who they are. The belief that their physical constitutions, mental aptitudes, social institutions or political formations are profoundly shaped by their dependence upon rice is sometimes expressed in everyday maxims and vernacular habits, sometimes formally elaborated by politicians, historians or scientists into theories of identity – as in the classic case of Japan, documented by Emiko Ohnuk...

  12. Chemometric classification of pigmented rice varieties based on antioxidative properties in relation to color

    Directory of Open Access Journals (Sweden)

    Phaiwan Pramai

    2016-10-01

    Full Text Available The pigmented Thai rice varieties including red and black color and non-pigmented rice (white collected from different growth sites in the north of Thailand and were determined for color and antioxidant properties. Anthocyanins were the major compound in group of black rice (21.15-441.96 mg/100 g rice. Total phenolic, flavonoid, and -tocopherol contents were highest in the black rice followed by red rice and antioxidant capacities were predominant in pigmented varieties. Black rice grown in mountainous area presented the highest antioxidant activity compared to the other growing locations. The color parameters, especially L* value presented the negative correlations with antioxidant parameters, while the antioxidant contents, excepted -oryzanol content had significant correlation with antioxidant capacities. Pigmented rice varieties could be clearly classified into 4 groups using PCA and HCA, which provided a good indicator to classify pigmented rice varieties based on color and antioxidative properties.

  13. Policies to support economic and environmental goals at farm and regional scales: Outcomes for rice farmers in Southern India depend on their resource endowment

    NARCIS (Netherlands)

    Senthilkumar, K.; Lubbers, M.T.M.H.; Ridder, de N.; Bindraban, P.S.; Thiyagarajan, T.M.; Giller, K.E.

    2011-01-01

    Improving water use and nitrogen efficiencies is of overall importance to society at large - to conserve scarce water resources and prevent environmental pollution. Efficient cultivation practices for rice which had no yield penalty were not adopted by farmers because of the open access to water

  14. In-silico mining, type and frequency analysis of genic microsatellites of finger millet (Eleusine coracana (L.) Gaertn.): a comparative genomic analysis of NBS-LRR regions of finger millet with rice.

    Science.gov (United States)

    Kalyana Babu, B; Pandey, Dinesh; Agrawal, P K; Sood, Salej; Kumar, Anil

    2014-05-01

    In recent years, the increased availability of the DNA sequences has given the possibility to develop and explore the expressed sequence tags (ESTs) derived SSR markers. In the present study, a total of 1956 ESTs of finger millet were used to find the microsatellite type, distribution, frequency and developed a total of 545 primer pairs from the ESTs of finger millet. Thirty-two EST sequences had more than two microsatellites and 1357 sequences did not have any SSR repeats. The most frequent type of repeats was trimeric motif, however the second place was occupied by dimeric motif followed by tetra-, hexa- and penta repeat motifs. The most common dimer repeat motif was GA and in case of trimeric SSRs, it was CGG. The EST sequences of NBS-LRR region of finger millet and rice showed higher synteny and were found on nearly same positions on the rice chromosome map. A total of eight, out of 15 EST based SSR primers were polymorphic among the selected resistant and susceptible finger millet genotypes. The primer FMBLEST5 could able to differentiate them into resistant and susceptible genotypes. The alleles specific to the resistant and susceptible genotypes were sequenced using the ABI 3130XL genetic analyzer and found similarity to NBS-LRR regions of rice and finger millet and contained the characteristic kinase-2 and kinase 3a motifs of plant R-genes belonged to NBS-LRR region. The In-silico and comparative analysis showed that the genes responsible for blast resistance can be identified, mapped and further introgressed through molecular breeding approaches for enhancing the blast resistance in finger millet.

  15. In vitro sterilization technique on embryo of black Toraja rice

    Science.gov (United States)

    Haring, F.; Riadi, M.; Rafiuddin; Sjahril, R.; Muchlis, A. R.

    2018-05-01

    Toraja black rice has a high anthocyanin content, a water-soluble pigments, with antioxidant activity. Toraja black rice has a variety of seeds colour in one panicles such as full black (the outside and inside the rice), medium black (the outside and slightly inside rice) and a little black (only the outside of rice). Embryo culture in vitro is one way to grow plants in sterile conditions. The presence of contamination and the death of the embryo require in vitro embryo culture. The sterilization technique is a very important first step to eliminate contamination and the death of embryos. This research aims to determine the right material composition for sterilization of black rice’s embryo. The experiment was done by growing black rice on half strength MS media with the treatment of three method of sterilization, i.e.: S1 (70% alcohol for 5 minutes, 3% and 2% Chlorox each for 10 minutes,), S2 (70% alcohol for 3 minutes, 2% Clorox for 10 minutes) and S3 (70% alcohol for 3 minutes and 1% Clorox for 15 minutes). The materials used are rice seedlings that have been cut in two and opened the pericarp of paddy grain, leaving a piece of rice that has a complete embryo. The best sterilization for Toraja black rice embryo culture was using the S3 composition. Best germination was seen on the seeds with full and medium black color.

  16. Life-cycle evaluation of nitrogen-use in rice-farming systems: implications for economically-optimal nitrogen rates

    Directory of Open Access Journals (Sweden)

    Y. Xia

    2011-11-01

    Full Text Available Nitrogen (N fertilizer plays an important role in agricultural systems in terms of food yield. However, N application rates (NARs are often overestimated over the rice (Oryza sativa L. growing season in the Taihu Lake region of China. This is largely because negative externalities are not entirely included when evaluating economically-optimal nitrogen rate (EONR, such as only individual N losses are taken into account, or the inventory flows of reactive N have been limited solely to the farming process when evaluating environmental and economic effects of N fertilizer. This study integrates important material and energy flows resulting from N use into a rice agricultural inventory that constitutes the hub of the life-cycle assessment (LCA method. An economic evaluation is used to determine an environmental and economic NAR for the Taihu Lake region. The analysis reveals that production and exploitation processes consume the largest proportion of resources, accounting for 77.2 % and 22.3 % of total resources, respectively. Regarding environmental impact, global warming creates the highest cost with contributions stemming mostly from fertilizer production and farming processes. Farming process incurs the biggest environmental impact of the three environmental impact categories considered, whereas transportation has a much smaller effect. When taking account of resource consumption and environmental cost, the marginal benefit of 1 kg rice would decrease from 2.4 to only 1.05 yuan. Accordingly, our current EONR has been evaluated at 187 kg N ha−1 for a single rice-growing season. This could enhance profitability, as well as reduce the N losses associated with rice growing.

  17. Analysis of the Economic Potential for a Mercosur Rice Futures Market

    Directory of Open Access Journals (Sweden)

    Waldemar Antonio da Rocha de Souza

    2015-08-01

    Full Text Available World rice production reached 488.4 thousand tons, in 2012. Asian countries are the world’s largest rice producers, followed by Latinamerica, particularly Brazil, where rice is a basic food item. In spite of the clear economic benefits bestowed by commodity futures markets, neither Asia nor Mercosur have implemented a regional rice futures market. In sum, we propose to investigate the feasibility of a Brazilian rice futures contract to serve the Mercosur region by estimating Mercosur rice price dynamics and analyze basis risk and hedging effectiveness for rice market agents in the region, in a simulation framework using a hypothetical regional contract price. Sample data and period was non-probabilistic, for accessibility and convenience. Mercosur rice price dynamics expressed Argentina and Uruguay rice prices moving in synchrony. Brazil rice prices were on lower levels. Also, all three pairs of rice price series are cointegrated, with one cointegrating equation. Again, results can be largely attributed to the different price data used, in Brazil was rough rice, while in Uruguay and Argentina milled white rice with 5%. Despite that, there are preliminary evidences that a Mercosur rice futures market could be feasible.

  18. Lead in rice: analysis of baseline lead levels in market and field collected rice grains.

    Science.gov (United States)

    Norton, Gareth J; Williams, Paul N; Adomako, Eureka E; Price, Adam H; Zhu, Yongguan; Zhao, Fang-Jie; McGrath, Steve; Deacon, Claire M; Villada, Antia; Sommella, Alessia; Lu, Ying; Ming, Lei; De Silva, P Mangala C S; Brammer, Hugh; Dasgupta, Tapash; Islam, M Rafiqul; Meharg, Andrew A

    2014-07-01

    In a large scale survey of rice grains from markets (13 countries) and fields (6 countries), a total of 1578 rice grain samples were analysed for lead. From the market collected samples, only 0.6% of the samples exceeded the Chinese and EU limit of 0.2 μg g(-1) lead in rice (when excluding samples collected from known contaminated/mine impacted regions). When evaluating the rice grain samples against the Food and Drug Administration's (FDA) provisional total tolerable intake (PTTI) values for children and pregnant women, it was found that only people consuming large quantities of rice were at risk of exceeding the PTTI from rice alone. Furthermore, 6 field experiments were conducted to evaluate the proportion of the variation in lead concentration in rice grains due to genetics. A total of 4 of the 6 field experiments had significant differences between genotypes, but when the genotypes common across all six field sites were assessed, only 4% of the variation was explained by genotype, with 9.5% and 11% of the variation explained by the environment and genotype by environment interaction respectively. Further work is needed to identify the sources of lead contamination in rice, with detailed information obtained on the locations and environments where the rice is sampled, so that specific risk assessments can be performed. Copyright © 2014 Elsevier B.V. All rights reserved.

  19. Effect of cultural practices on the incidence and carry over of insect pests in rice-wheat system

    International Nuclear Information System (INIS)

    Ramzan, M.; Akhtar, M.; Hussain, S.

    2008-01-01

    Changes in cultural practices in rice-wheat system like mechanical transplanted rice, broadcasting (parachute method) of rice seedlings, direct seeding of rice, bed planting of rice and wheat and zero-till wheat sowing may affect population of insect pests and their natural enemies. The population of insect pests and their damage intensity on rice and wheat crops were determined for resource conservation technologies in rice-wheat system. Unploughed fallow fields and those planted with berseem are the major over-wintering sites of rice stem borers (RSB). Growing of wheat after rice, either by conventional or zero-tillage minimizes RSB problem. The effect of technological shifts in rice-wheat systems was discussed on leaffolder (LF) and white backed planthopper (WBPH) populations. Conservation tillage might take on preventive management as the diversity and population size of many beneficial organisms, especially soil-inhabiting predators, can be increased. (author)

  20. Little white lies: pericarp color provides insights into the origins and evolution of Southeast Asian weedy rice

    Science.gov (United States)

    Weedy rice is a conspecific form of cultivated rice (Oryza sativa L.) that infests rice fields and results in severe crop losses. Weed strains in different world regions appear to have originated multiple times from different domesticated and/or wild rice progenitors. In the case of Malaysian weedy ...

  1. Transgenic Bacillus thuringiensis (Bt rice is safer to aquatic ecosystems than its non-transgenic counterpart.

    Directory of Open Access Journals (Sweden)

    Guangsheng Li

    Full Text Available Rice lines genetically modified with the crystal toxin genes from Bacillus thuringiensis (Bt have experienced rapid development, with biosafety certificates for two Bt rice lines issued in 2009. There has still been no commercial release of these lines yet due to public concerns about human health and environmental risks. Some studies confirmed that Bt rice was as safe as conventional rice to non-target organisms when pesticides were not applied, however, pesticides are still required in Bt rice to control non-lepidopteran pests. In this study, we assessed the environmental effects of two Bt rice lines expressing either the cry1Ab/1Ac or cry2A genes, respectively, by using zooplanktons as indicator species under normal field management practices using pesticides when required. In the whole rice growing season, non-Bt rice was sprayed 5 times while Bt rice was sprayed 2 times, which ensured both rice achieved a normal yield. Field investigations showed that rice type (Bt and non-Bt significantly influenced zooplankton abundance and diversity, which were up to 95% and 80% lower in non-Bt rice fields than Bt rice fields. Laboratory rearing showed that water from non-Bt rice fields was significantly less suitable for the survival and reproduction of Daphnia magna and Paramecium caudatum in comparison with water from Bt rice fields. Higher pesticide residues were detected in the water from non-Bt than Bt rice fields, accounting for the bad performance of zooplankton in non-Bt field water. Our results demonstrate that Bt rice is safer to aquatic ecosystems than non-Bt rice, and its commercialization will be beneficial for biodiversity restoration in rice-based ecosystems.

  2. Induced Mutations in Thai Rice

    International Nuclear Information System (INIS)

    Klakhaeng, Kanchana

    2014-01-01

    Rice is the primary source of food for more than half of the world's population. It benefits greatly from technological inputs in the area of breeding such as induced mutation. Induced mutation can produce mutants with significant improvement in plant type, maturity, yields and protein ratio when compared to the parent. These improved traits enable the mutants to fit into farming systems with either shorter or longer growing seasons. Three induced mutant rice varieties, including RD6, RD10 and RD15, are well accepted by farmers and consumers in Thailand. RD6 and RD15 were aromatic, photosensitive varieties which were derived from KDML105 by acute irradiation of 20 and 15 kilorad gamma ray, respectively. After induced mutation, pedigree selection was applied. RD6 showed drought tolerance and also good grain quality including softness and good aroma with a higher average yield than the famous glutinous variety, San-Pah-Tong. Additionally, it was resistant to blast and brown spot diseases with an average yield of 4.19 tons/ha. RD15 showed drought tolerance and resistance to brown spot disease with the highest yield of 3.5 tons/ha. These two mutant varieties are currently the most famous aromatic rice varieties in Thailand. On the other hand, RD10 is a glutinous, photoperiod insensitive rice variety which was derived from RD1 by irradiation of 1 kilorad fast neutrons. RD10 showed good grain quality such as softness and stickiness with the yield of 4.25 tons/ha. As an on-going project, recommended rice varieties were irradiated with electron beam for anaerobic germination ability, submergence tolerance, stagnant-flood tolerance and also internode elongation.

  3. Building a Rice Decision Support System to Support Global Food Security and Commodity Markets, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Rice is an important crop globally that influences food security and the Earth system. Rice is the predominant food staple in many regions with approximately 700...

  4. Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl.

    Science.gov (United States)

    Miller, Michael R.; Garr, Jay D.; Coates, Peter S.

    2010-01-01

    Harvested rice fields provide critical foraging habitat for wintering waterfowl in North America, but their value depends upon post-harvest treatments. We visited harvested ricefields in the Sacramento Valley, California, during the winters of 2007 and 2008 (recent period) and recorded their observed status as harvested (standing or mechanically modified stubble), burned, plowed, or flooded. We compared these data with those from identical studies conducted during the 1980s (early period). We documented substantial changes in field status between periods. First, the area of flooded rice increased 4-5-fold, from about 15% to >40% of fields, because of a 3-4-fold increase in the percentage of fields flooded coupled with a 37-41% increase in the area of rice produced. Concurrently, the area of plowed fields increased from 35% of fields, burned fields declined from about 40% to 1%, and fields categorized as harvested declined from 22-54% to rice field status survey in the Sacramento Valley and other North American rice growing regions as appropriate to support long-term monitoring programs and wetland habitat conservation planning for wintering waterfowl.

  5. Integrated rice-duck farming mitigates the global warming potential in rice season.

    Science.gov (United States)

    Xu, Guochun; Liu, Xin; Wang, Qiangsheng; Yu, Xichen; Hang, Yuhao

    2017-01-01

    Integrated rice-duck farming (IRDF), as a mode of ecological agriculture, is an important way to realize sustainable development of agriculture. A 2-year split-plot field experiment was performed to evaluate the effects of IRDF on methane (CH 4 ) and nitrous oxide (N 2 O) emissions and its ecological mechanism in rice season. This experiment was conducted with two rice farming systems (FS) of IRDF and conventional farming (CF) under four paddy-upland rotation systems (PUR): rice-fallow (RF), annual straw incorporating in rice-wheat rotation system (RWS), annual straw-based biogas residues incorporating in rice-wheat rotation system (RWB), and rice-green manure (RGM). During the rice growing seasons, IRDF decreased the CH 4 emission by 8.80-16.68%, while increased the N 2 O emission by 4.23-15.20%, when compared to CF. Given that CH 4 emission contributed to 85.83-96.22% of global warming potential (GWP), the strong reduction in CH 4 emission led to a significantly lower GWP of IRDF as compared to CF. The reason for this trend was because IRDF has significant effect on dissolved oxygen (DO) and soil redox potential (Eh), which were two pivotal factors for CH 4 and N 2 O emissions in this study. The IRDF not only mitigates the GWP, but also increases the rice yield by 0.76-2.43% compared to CF. Moreover, compared to RWS system, RF, RWB and RGM systems significantly reduced CH 4 emission by 50.17%, 44.89% and 39.51%, respectively, while increased N 2 O emission by 10.58%, 14.60% and 23.90%, respectively. And RWS system had the highest GWP. These findings suggest that mitigating GWP and improving rice yield could be simultaneously achieved by the IRDF, and employing suitable PUR would benefit for relieving greenhouse effect. Copyright © 2016 Elsevier B.V. All rights reserved.

  6. Rice production model based on the concept of ecological footprint

    Science.gov (United States)

    Faiz, S. A.; Wicaksono, A. D.; Dinanti, D.

    2017-06-01

    Pursuant to what had been stated in Region Spatial Planning (RTRW) of Malang Regency for period 2010-2030, Malang Regency was considered as the center of agricultural development, including districts bordered with Malang City. To protect the region functioning as the provider of rice production, then the policy of sustainable food farming-land (LP2B) was made which its implementation aims to protect rice-land. In the existing condition, LP2B system was not maximally executed, and it caused a limited extend of rice-land to deliver rice production output. One cause related with the development of settlements and industries due to the effect of Malang City that converted land-function. Location of research focused on 30 villages with direct border with Malang City. Review was conducted to develop a model of relation between farming production output and ecological footprint variables. These variables include rice-land area (X1), built land percentage (X2), and number of farmers (X3). Analysis technique was regression. Result of regression indicated that the model of rice production output Y=-207,983 + 10.246X1. Rice-land area (X1) was the most influential independent variable. It was concluded that of villages directly bordered with Malang City, there were 11 villages with higher production potential because their rice production yield was more than 1,000 tons/year, while 12 villages were threatened with low production output because its rice production yield only attained 500 tons/year. Based on the model and the spatial direction of RTRW, it can be said that the direction for the farming development policy must be redesigned to maintain rice-land area on the regions on which agricultural activity was still dominant. Because rice-land area was the most influential factor to farming production. Therefore, the wider the rice-land is, the higher rice production output is on each village.

  7. Growing an Emerging Research University

    Science.gov (United States)

    Birx, Donald L.; Anderson-Fletcher, Elizabeth; Whitney, Elizabeth

    2013-01-01

    The emerging research college or university is one of the most formidable resources a region has to reinvent and grow its economy. This paper is the first of two that outlines a process of building research universities that enhance regional technology development and facilitate flexible networks of collaboration and resource sharing. Although the…

  8. Farmers’ Preference for Rice Traits: Insights from Farm Surveys in Central Luzon, Philippines, 1966-2012

    Science.gov (United States)

    Laborte, Alice G.; Paguirigan, Neale C.; Moya, Piedad F.; Nelson, Andrew; Sparks, Adam H.; Gregorio, Glenn B.

    2015-01-01

    Many modern rice varieties (MVs) have been released but only a few have been widely adopted by farmers. To understand farmers’ preferences, we characterized MVs released in the Philippines from 1966 to 2013 and identified important characteristics of the varieties that were widely adopted in Central Luzon using farm surveys conducted in 1966–2012. We found that farmers adopt MVs that are high yielding, mature faster, and have long and slender grains, high milling recovery, and intermediate amylose content. The amylose content of adopted varieties has been declining, suggesting value in developing softer rice. To have a high potential for adoption, new MVs should have characteristics within the ranges of values observed for the adopted MVs. In addition, new MVs should have higher head rice recovery, less chalky grains, and better resistance to pests and diseases. Most MVs released in 2005–2013 compared poorly in these three traits. To reduce the risk of severe outbreaks, broad spectrum resistance should be incorporated into new MVs. This analysis of five decades of farm surveys provides insights into the varietal characteristics preferred by farmers which could contribute to the establishment of a product profile for developing improved MVs that are more targeted and, hence, would have high potential for adoption by farmers in Central Luzon and similar areas. We recommend a similar analysis be done in other major rice growing regions to aid the development of MVs that are more responsive to farmers’ needs and preferences. PMID:26317505

  9. A Large Rice Body-Containing Cyst Mimicking Infection following Total Hip Arthroplasty: A Case Report

    Directory of Open Access Journals (Sweden)

    Wael Bayoud

    2017-01-01

    Full Text Available Introduction. Soft tissue mass following total hip arthroplasty raises several differential diagnoses not limited to infection, hematoma, wear debris, malignancy, and bursitis. Rice body formation in the hip region is an uncommon process denoting a chronic inflammation. We report here the second case of its kind in the medical literature of a wide symptomatic rice-like body cyst complicating a total hip arthroplasty. Case Presentation. This is the case of an 82-year-old white female, presenting with a warm, red, and inflated groin five years after revision of right total hip arthroplasty. Surgical intervention reveals a large well circumscribed cyst containing well-organized rice-like bodies. This eventuality was never reported in differential diagnosis of hip periprosthetic soft tissue masses before. Conclusion. This case report helps widening the array of the differential diagnosis in patients presenting with a slow growing soft tissue mass following total hip arthroplasty, making rice-like bodies cyst a valid one to consider.

  10. Biological control of rice brown spot with native isolates of three Trichoderma species

    Directory of Open Access Journals (Sweden)

    Elham Khalili

    2012-03-01

    Full Text Available Brown spot caused by Bipolaris oryzae is an important rice disease in Southern coast of Caspian Sea, the major rice growing region in Iran. A total of 45 Trichoderma isolates were obtained from rice paddy fields in Golestan and Mazandaran provinces which belonged to Trichoderma harzianum, T. virens and T. atroviride species. Initially, they were screened against B. oryzae by antagonism tests including dual culture, volatile and nonvolatile metabolites and hyperparasitism. Results showed that Trichoderma isolates can significantly inhibit mycelium growth of pathogen in vitro by producing volatile and nonvolatile metabolites Light microscopic observations showed no evidence of mycoparasitic behaviour of the tested isolates of Trichoderma spp. such as coiling around the B. oryzae. According to in vitro experiments, Trichoderma isolates were selected in order to evaluate their efficacy in controlling brown spot in glasshouse using seed treatment and foliar spray methods. Concerning the glasshouse tests, two strains of T. harzianum significantly controlled the disease and one strain of T. atroviride increased the seedling growth. It is the first time that the biological control of rice brown spot and increase of seedling growth with Trichoderma species have been studied in Iran.

  11. The land use potential of flood-prone rice fields using floating rice system in Bojonegoro regency in East Java

    Science.gov (United States)

    Irianto, H.; Mujiyo; Riptanti, E. W.; Qonita, A.

    2018-03-01

    Bojonegoro regency occupies the largest flood-prone rice fields of about 14,198 hectares, in East Java province. Floods commonly occur due to Bengawan Solo river over-burst, particularly in rainy season. The fields are potential for cultivating rice, but floods lasting for months causing these areas to be unproductive. The objective of this article is to examine the potential land use of flood prone rice fields in Bojonegoro regency using floating rice system as an effort to maintain productivity in rainy season. The method of this study is referential study about the rice production using floating cultivation system in other regions, which are later compared with the physical condition of the fields in Bojonegoro. The results of analysis show that rice cultivation using floating system can maintain rice production in flood prone areas during rainy season. The potential production of rice is 5-6 tons/ha. However, technical problems for cultivating rice cannot be ignored since farmers are not familiar with cultivating flooded fields. This article also explains alternatives of floating rice cultivation technique, which can be implemented effectively and efficiently. Pioneer work of developing floating rice in Bojonegoro that has been done by the Team of Faculty of Agriculture of UNS, Surakarta, is expected to serve as a medium for accelerating the adoption of cultivation technology innovation to farmers.

  12. Rice peasants and rice research in Colombia

    NARCIS (Netherlands)

    Spijkers, P.A.N.M.

    1983-01-01

    Rice has been grown as a food crop in Latin America from early colonial times. In Colombia rice became a prominent subsistence crop especially on the north coast where it has been grown since the 17th century, sometimes also as a commercial crop. During the last twenty years there has been a sharp

  13. The puzzle of Italian rice origin and evolution: determining genetic divergence and affinity of rice germplasm from Italy and Asia.

    Directory of Open Access Journals (Sweden)

    Xingxing Cai

    Full Text Available The characterization of genetic divergence and relationships of a set of germplasm is essential for its efficient applications in crop breeding and understanding of the origin/evolution of crop varieties from a given geographical region. As the largest rice producing country in Europe, Italy holds rice germplasm with abundant genetic diversity. Although Italian rice varieties and the traditional ones in particular have played important roles in rice production and breeding, knowledge concerning the origin and evolution of Italian traditional varieties is still limited. To solve the puzzle of Italian rice origin, we characterized genetic divergence and relationships of 348 rice varieties from Italy and Asia based on the polymorphisms of microsatellite fingerprints. We also included common wild rice O. rufipogon as a reference in the characterization. Results indicated relatively rich genetic diversity (H(e = 0.63-0.65 in Italian rice varieties. Further analyses revealed a close genetic relationship of the Italian traditional varieties with those from northern China, which provides strong genetic evidence for tracing the possible origin of early established rice varieties in Italy. These findings have significant implications for the rice breeding programs, in which appropriate germplasm can be selected from a given region and utilized for transferring unique genetic traits based on its genetic diversity and evolutionary relationships.

  14. Diversity and population dynamics of pests and predators in irrigated rice fields with treated and untreated pesticide.

    Science.gov (United States)

    Rattanapun, W

    2012-01-01

    The monitoring of rice pests and their predators in pesticide untreated and treated rice fields was conducted at the southern of Thailand. Twenty-two species in 15 families and 6 orders of rice pests were sampled from untreated rice field. For treated rice field, 22 species in 14 families and 5 orders of rice pest were collected. Regardless of treatment type, dominant species and individual number of rice pest varied to physiological stage of rice. Lepidopteran pests had highest infestation during the vegetative stage of rice growth, while hemipteran pests composed of hopper species (Hemipetra: Auchenorrhyncha) and heteropteran species (Hemiptera: Heteroptera) were dominant groups during the reproductive stage and grain formation and ripening stage of rice growth. In contrast, dominant species of predator did not change throughout rice growing season. There were 35 species in 25 families and seven orders and 40 species in 29 families and seven orders of predators collected from untreated and treated rice field, respectively. Major predators of both rice fields were Micraspis discolor (Fabricius) (Coleoptera: Coccinellidae), Tetragnatha sp. (Araneae: Tetragnathidae) and Agriocnemis pygmaea Rambur (Odonata: Agrionidae). The population dynamic of predators were not related with rice pest population in both treatments. However, the fluctuation of population pattern of rice pests in the untreated treatment were more distinctly synchronized with their predators than that of the treated treatment. There were no significant differences in the total number of rice pest and predator between two treatments at vegetative and reproductive stages of rice growth. Untreated rice field had a higher population number of predator and a lower population number of rice pest than that of treated rice field during grain formation and ripening stages. These results indicated the ago-ecosystem balance in rice fields could be produced through minimal pesticide application, in order to allow

  15. NAL1 allele from a rice landrace greatly increases yield in modern indica cultivars.

    Science.gov (United States)

    Fujita, Daisuke; Trijatmiko, Kurniawan Rudi; Tagle, Analiza Grubanzo; Sapasap, Maria Veronica; Koide, Yohei; Sasaki, Kazuhiro; Tsakirpaloglou, Nikolaos; Gannaban, Ritchel Bueno; Nishimura, Takeshi; Yanagihara, Seiji; Fukuta, Yoshimichi; Koshiba, Tomokazu; Slamet-Loedin, Inez Hortense; Ishimaru, Tsutomu; Kobayashi, Nobuya

    2013-12-17

    Increasing crop production is essential for securing the future food supply in developing countries in Asia and Africa as economies and populations grow. However, although the Green Revolution led to increased grain production in the 1960s, no major advances have been made in increasing yield potential in rice since then. In this study, we identified a gene, SPIKELET NUMBER (SPIKE), from a tropical japonica rice landrace that enhances the grain productivity of indica cultivars through pleiotropic effects on plant architecture. Map-based cloning revealed that SPIKE was identical to NARROW LEAF1 (NAL1), which has been reported to control vein pattern in leaf. Phenotypic analyses of a near-isogenic line of a popular indica cultivar, IR64, and overexpressor lines revealed increases in spikelet number, leaf size, root system, and the number of vascular bundles, indicating the enhancement of source size and translocation capacity as well as sink size. The near-isogenic line achieved 13-36% yield increase without any negative effect on grain appearance. Expression analysis revealed that the gene was expressed in all cell types: panicles, leaves, roots, and culms supporting the pleiotropic effects on plant architecture. Furthermore, SPIKE increased grain yield by 18% in the recently released indica cultivar IRRI146, and increased spikelet number in the genetic background of other popular indica cultivars. The use of SPIKE in rice breeding could contribute to food security in indica-growing regions such as South and Southeast Asia.

  16. Impacts of short-rotation early-growing season prescribed fire on a ground nesting bird in the central hardwoods region of North America

    Science.gov (United States)

    Pittman, H. Tyler; Krementz, David G.

    2016-01-01

    Landscape-scale short-rotation early-growing season prescribed fire, hereafter prescribed fire, in upland hardwood forests represents a recent shift in management strategies across eastern upland forests. Not only does this strategy depart from dormant season to growing season prescriptions, but the strategy also moves from stand-scale to landscape-scale implementation (>1,000 ha). This being so, agencies are making considerable commitments in terms of time and resources to this management strategy, but the effects on wildlife in upland forests, especially those dominated by hardwood canopy species, are relatively unknown. We initiated our study to assess whether this management strategy affects eastern wild turkey reproductive ecology on the Ozark-St. Francis National Forest. We marked 67 wild turkey hens with Global Positioning System (GPS) Platform Transmitting Terminals in 2012 and 2013 to document exposure to prescribed fire, and estimate daily nest survival, nest success, and nest-site selection. We estimated these reproductive parameters in forest units managed with prescribed fire (treated) and units absent of prescribed fire (untreated). Of 60 initial nest attempts monitored, none were destroyed or exposed to prescribed fire because a majority of fires occurred early than a majority of the nesting activity. We found nest success was greater in untreated units than treated units (36.4% versus 14.6%). We did not find any habitat characteristic differences between successful and unsuccessful nest-sites. We found that nest-site selection criteria differed between treated and untreated units. Visual concealment and woody ground cover were common selection criteria in both treated and untreated units. However, in treated units wild turkey selected nest-sites with fewer small shrubs (20 cm DBH) but not in untreated units. In untreated units wild turkey selected nest-sites with more large shrubs (≥5cm ground diameter) but did not select for small shrubs or large

  17. Impacts of Short-Rotation Early-Growing Season Prescribed Fire on a Ground Nesting Bird in the Central Hardwoods Region of North America.

    Directory of Open Access Journals (Sweden)

    H Tyler Pittman

    Full Text Available Landscape-scale short-rotation early-growing season prescribed fire, hereafter prescribed fire, in upland hardwood forests represents a recent shift in management strategies across eastern upland forests. Not only does this strategy depart from dormant season to growing season prescriptions, but the strategy also moves from stand-scale to landscape-scale implementation (>1,000 ha. This being so, agencies are making considerable commitments in terms of time and resources to this management strategy, but the effects on wildlife in upland forests, especially those dominated by hardwood canopy species, are relatively unknown. We initiated our study to assess whether this management strategy affects eastern wild turkey reproductive ecology on the Ozark-St. Francis National Forest. We marked 67 wild turkey hens with Global Positioning System (GPS Platform Transmitting Terminals in 2012 and 2013 to document exposure to prescribed fire, and estimate daily nest survival, nest success, and nest-site selection. We estimated these reproductive parameters in forest units managed with prescribed fire (treated and units absent of prescribed fire (untreated. Of 60 initial nest attempts monitored, none were destroyed or exposed to prescribed fire because a majority of fires occurred early than a majority of the nesting activity. We found nest success was greater in untreated units than treated units (36.4% versus 14.6%. We did not find any habitat characteristic differences between successful and unsuccessful nest-sites. We found that nest-site selection criteria differed between treated and untreated units. Visual concealment and woody ground cover were common selection criteria in both treated and untreated units. However, in treated units wild turkey selected nest-sites with fewer small shrubs (20 cm DBH but not in untreated units. In untreated units wild turkey selected nest-sites with more large shrubs (≥5 cm ground diameter but did not select for small

  18. Impacts of Short-Rotation Early-Growing Season Prescribed Fire on a Ground Nesting Bird in the Central Hardwoods Region of North America.

    Science.gov (United States)

    Pittman, H Tyler; Krementz, David G

    2016-01-01

    Landscape-scale short-rotation early-growing season prescribed fire, hereafter prescribed fire, in upland hardwood forests represents a recent shift in management strategies across eastern upland forests. Not only does this strategy depart from dormant season to growing season prescriptions, but the strategy also moves from stand-scale to landscape-scale implementation (>1,000 ha). This being so, agencies are making considerable commitments in terms of time and resources to this management strategy, but the effects on wildlife in upland forests, especially those dominated by hardwood canopy species, are relatively unknown. We initiated our study to assess whether this management strategy affects eastern wild turkey reproductive ecology on the Ozark-St. Francis National Forest. We marked 67 wild turkey hens with Global Positioning System (GPS) Platform Transmitting Terminals in 2012 and 2013 to document exposure to prescribed fire, and estimate daily nest survival, nest success, and nest-site selection. We estimated these reproductive parameters in forest units managed with prescribed fire (treated) and units absent of prescribed fire (untreated). Of 60 initial nest attempts monitored, none were destroyed or exposed to prescribed fire because a majority of fires occurred early than a majority of the nesting activity. We found nest success was greater in untreated units than treated units (36.4% versus 14.6%). We did not find any habitat characteristic differences between successful and unsuccessful nest-sites. We found that nest-site selection criteria differed between treated and untreated units. Visual concealment and woody ground cover were common selection criteria in both treated and untreated units. However, in treated units wild turkey selected nest-sites with fewer small shrubs (20 cm DBH) but not in untreated units. In untreated units wild turkey selected nest-sites with more large shrubs (≥5 cm ground diameter) but did not select for small shrubs or

  19. Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA.

    Directory of Open Access Journals (Sweden)

    Seonghee Lee

    Full Text Available The Pi-ta gene in rice has been effectively used to control rice blast disease caused by Magnaporthe oryzae worldwide. Despite a number of studies that reported the Pi-ta gene in domesticated rice and wild species, little is known about how the Pi-ta gene has evolved in US weedy rice, a major weed of rice. To investigate the genome organization of the Pi-ta gene in weedy rice and its relationship to gene flow between cultivated and weedy rice in the US, we analyzed nucleotide sequence variation at the Pi-ta gene and its surrounding 2 Mb region in 156 weedy, domesticated and wild rice relatives. We found that the region at and around the Pi-ta gene shows very low genetic diversity in US weedy rice. The patterns of molecular diversity in weeds are more similar to cultivated rice (indica and aus, which have never been cultivated in the US, rather than the wild rice species, Oryza rufipogon. In addition, the resistant Pi-ta allele (Pi-ta found in the majority of US weedy rice belongs to the weedy group strawhull awnless (SH, suggesting a single source of origin for Pi-ta. Weeds with Pi-ta were resistant to two M. oryzae races, IC17 and IB49, except for three accessions, suggesting that component(s required for the Pi-ta mediated resistance may be missing in these accessions. Signatures of flanking sequences of the Pi-ta gene and SSR markers on chromosome 12 suggest that the susceptible pi-ta allele (pi-ta, not Pi-ta, has been introgressed from cultivated to weedy rice by out-crossing.

  20. Molecular Evolution of the Rice Blast Resistance Gene Pi-ta in Invasive Weedy Rice in the USA

    Science.gov (United States)

    Lee, Seonghee; Jia, Yulin; Jia, Melissa; Gealy, David R.; Olsen, Kenneth M.; Caicedo, Ana L.

    2011-01-01

    The Pi-ta gene in rice has been effectively used to control rice blast disease caused by Magnaporthe oryzae worldwide. Despite a number of studies that reported the Pi-ta gene in domesticated rice and wild species, little is known about how the Pi-ta gene has evolved in US weedy rice, a major weed of rice. To investigate the genome organization of the Pi-ta gene in weedy rice and its relationship to gene flow between cultivated and weedy rice in the US, we analyzed nucleotide sequence variation at the Pi-ta gene and its surrounding 2 Mb region in 156 weedy, domesticated and wild rice relatives. We found that the region at and around the Pi-ta gene shows very low genetic diversity in US weedy rice. The patterns of molecular diversity in weeds are more similar to cultivated rice (indica and aus), which have never been cultivated in the US, rather than the wild rice species, Oryza rufipogon. In addition, the resistant Pi-ta allele (Pi-ta) found in the majority of US weedy rice belongs to the weedy group strawhull awnless (SH), suggesting a single source of origin for Pi-ta. Weeds with Pi-ta were resistant to two M. oryzae races, IC17 and IB49, except for three accessions, suggesting that component(s) required for the Pi-ta mediated resistance may be missing in these accessions. Signatures of flanking sequences of the Pi-ta gene and SSR markers on chromosome 12 suggest that the susceptible pi-ta allele (pi-ta), not Pi-ta, has been introgressed from cultivated to weedy rice by out-crossing. PMID:22043312

  1. Gas exchange variability and water use efficiency of thirty landraces of rice still under cultivation in Kumaun region of the Indian Central Himalaya.

    Science.gov (United States)

    Agnihotri, R K; Palni, L M S; Chandra, Suman; Joshi, S C

    2009-10-01

    Gas exchange characteristics of thirty landraces of rice (Oryza sativa L.) along with an introduced variety VL-206 (recommended high yielding variety for rainfed uplands of the Indian Central Himalaya, ICH), grown in earthen pots and kept in the open at the Institute nursery at Kosi (1150m amsl, 79°38'10″E and 29°38'15″N) were studied. The photosynthetic rate (Pn) and other related parameters were found to vary considerably among landraces. Based on the comparison of Pn of landraces with that of VL-206, these were categorized into two groups: i) high (〉6.0 µmol m(-2)s(-1)), and ii) low (water use efficiency (WUE), mesophyll efficiency (low Ci/gs ratio) and chlorophyll (Chl) content in comparison to landraces in the low Pn group. However, significant differences were not found in the intercellular CO2 concentration (Ci) between landraces belonging to the high and low Pn groups. Differences among landraces were found with regard to dark respiration; landraces with low Pn respired proportionately more of the carbon fixed than those of high Pn group. Based on the studied gas exchange characteristics Saurajubawan, Syaudhan and Taichin, local landraces of rice, may be identified as potential cultivars with high Pn and WUE.

  2. Binding Site Concentration Explains the Differential Susceptibility of Chilo suppressalis and Sesamia inferens to Cry1A-Producing Rice

    OpenAIRE

    Han, Lanzhi; Han, Chao; Liu, Zewen; Chen, Fajun; Jurat-Fuentes, Juan Luis; Hou, Maolin; Peng, Yufa

    2014-01-01

    Chilo suppressalis and Sesamia inferens are two important lepidopteran rice pests that occur concurrently during outbreaks in paddy fields in the main rice-growing areas of China. Previous and current field tests demonstrate that the transgenic rice line Huahui 1 (HH1) producing a Cry1Ab-Cry1Ac hybrid toxin from the bacterium Bacillus thuringiensis reduces egg and larval densities of C. suppressalis but not of S. inferens. This differential susceptibility to HH1 rice correlates with the reduc...

  3. Growing media [Chapter 5

    Science.gov (United States)

    Douglass F. Jacobs; Thomas D. Landis; Tara Luna

    2009-01-01

    Selecting the proper growing medium is one of the most important considerations in nursery plant production. A growing medium can be defined as a substance through which roots grow and extract water and nutrients. In native plant nurseries, a growing medium can consist of native soil but is more commonly an "artificial soil" composed of materials such as peat...

  4. 76 FR 13890 - Importation of Bromeliad Plants in Growing Media From Belgium, Denmark, and the Netherlands

    Science.gov (United States)

    2011-03-15

    ... importation into the United States be free of sand, soil, earth, and other growing media. This requirement is..., Quarantine, Reporting and recordkeeping requirements, Rice, Vegetables. Accordingly, we propose to amend 7...

  5. Economic Viability of Small Scale Organic Production of Rice, Common Bean and Maize in Goias State, Brazil

    Directory of Open Access Journals (Sweden)

    Alcido Elenor Wander

    2007-04-01

    Full Text Available This study was conducted to assess the economic feasibility of small scale organic production of rice, common bean and maize in Goias State, Brazil. During 2004/05 and 2005/06 growing seasons, rice, common bean and maize were produced at the organic farm of Embrapa Rice and Beans in five mulching systems (fallow, Crotalaria juncea, Cajanus cajan, Mucuna aterrima and Sorghum bicolor , with and without tillage. Soil tillage consisted of heavy disc harrowing followed by light disc harrowing. All operations and used inputs were recorded. Based on those records, the production costs for each crop were estimated for each cropping season. The costs included operations like sowing, ploughing, harrowing, spraying, fertilizer broadcasting and harvesting, as well as inputs like seeds, inoculant strains of Rhizobium, neem oil and organic fertilizers. The benefits include the gross revenue obtained by multiplying the production amount with the market price for non-organic products. For the purpose of analysis of competitiveness of organic production in comparison to conventional farming the market prices assumed were those of conventional production. In the analysis, the costs of certification were not considered yet due to lack of certifiers in the region. For comparison between traits, net revenue, the benefit-cost-ratio (BCR and the break even point were used. In 2004/05 growing season the BCR varied from 0.27 for common bean on S. bicolor mulch system with tillage up to 4.05 for green harvested maize produced after C. juncea in no tillage system. Common bean and rice were not economically viable in this growing season. In 2005/06 growing season the BCR varied between 0.75 for common bean after S. bicolor in tillage system and 4.50 for green harvested maize produced after fallow in no tillage system. In this season common bean was economically viable in leguminous mulching systems and green harvested maize was viable in all mulching systems.

  6. Low-level maternal methylmercury exposure through rice ingestion and potential implications for offspring health

    Energy Technology Data Exchange (ETDEWEB)

    Rothenberg, Sarah E., E-mail: rothenberg.sarah@gmail.com [State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, 46 Guanshui Lu, Guiyang 550002 (China); Feng Xinbin, E-mail: fengxinbin@vip.skleg.cn [State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, 46 Guanshui Lu, Guiyang 550002 (China); Li Ping [State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, 46 Guanshui Lu, Guiyang 550002 (China)

    2011-04-15

    Fish consumption is considered the primary pathway for MeHg (MeHg) exposure; however, MeHg exposure also occurs through rice ingestion. Rice is grown in an aquatic environment and although documented MeHg concentrations in rice are lower compared to fish tissue, human exposures exceed international guidelines in some regions where rice is a staple food and rice MeHg levels are elevated. Studies concerning human health exposure to MeHg should also include populations where maternal MeHg exposure occurs through ingestion of rice. Rice does not contain long-chain polyunsaturated fatty acids, which are associated with confounding developmental outcomes in offspring. Rice is also a staple food for more than half the world's population; therefore, it is critical to investigate the potential health risks of maternal ingestion of rice to the developing fetus, the most susceptible population to the deleterious effects of MeHg. Data concerning MeHg in rice are reviewed and micronutrients in rice are discussed. - Research highlights: > Maternal methylmercury exposure through rice may be important. > Rice does not contain the same micronutrients as fish, but may contain methylmercury. > Effects to offspring from methylmercury without beneficial micronutrients are unknown. - Studies concerning maternal methylmercury exposure and cognitive outcomes for offspring should include populations where rice ingestion is the primary methylmercury exposure pathway.

  7. Low-level maternal methylmercury exposure through rice ingestion and potential implications for offspring health

    International Nuclear Information System (INIS)

    Rothenberg, Sarah E.; Feng Xinbin; Li Ping

    2011-01-01

    Fish consumption is considered the primary pathway for MeHg (MeHg) exposure; however, MeHg exposure also occurs through rice ingestion. Rice is grown in an aquatic environment and although documented MeHg concentrations in rice are lower compared to fish tissue, human exposures exceed international guidelines in some regions where rice is a staple food and rice MeHg levels are elevated. Studies concerning human health exposure to MeHg should also include populations where maternal MeHg exposure occurs through ingestion of rice. Rice does not contain long-chain polyunsaturated fatty acids, which are associated with confounding developmental outcomes in offspring. Rice is also a staple food for more than half the world's population; therefore, it is critical to investigate the potential health risks of maternal ingestion of rice to the developing fetus, the most susceptible population to the deleterious effects of MeHg. Data concerning MeHg in rice are reviewed and micronutrients in rice are discussed. - Research highlights: → Maternal methylmercury exposure through rice may be important. → Rice does not contain the same micronutrients as fish, but may contain methylmercury. → Effects to offspring from methylmercury without beneficial micronutrients are unknown. - Studies concerning maternal methylmercury exposure and cognitive outcomes for offspring should include populations where rice ingestion is the primary methylmercury exposure pathway.

  8. Physiology and modelling of zinc allocation in aerobic rice

    NARCIS (Netherlands)

    Jiang, W.

    2008-01-01

    Keywords: Zinc, rice, Oryza sativa, grain, Zn mass concentration, biofortification

    Zinc (Zn) deficiency in humans is widespread in many regions of the world, especially in the developing world. Rice, the staple food of more than half of the world’s population, is potentially an important

  9. ISSR markers for gender identification and genetic diagnosis of Hippophae rhamnoides ssp. turkestanica growing at high altitudes in Ladakh region (Jammu and Kashmir).

    Science.gov (United States)

    Das, Kamal; Ganie, Showkat Hussain; Mangla, Yash; Dar, Tanvir-Ul-Hassan; Chaudhary, Manju; Thakur, Rakesh Kumar; Tandon, Rajesh; Raina, S N; Goel, Shailendra

    2017-03-01

    Hippophae rhamnoides L. ssp. turkestanica (Elaeagnaceae) is a predominantly dioecious and wind-pollinated medicinal plant species. The mature fruits of the species possess antioxidative, anti-inflammatory, antimicrobial, anticancerous, and antistimulatory properties that are believed to improve the immune system. The identification of male and female plants in H. rhamnoides ssp. turkestanica is quite difficult until flowering which usually takes 3-4 years or more. A sex-linked marker can be helpful in establishing the orchards through identification of genders at an early stage of development. Therefore, we studied the genetic diversity of populations in Ladakh with the aim to identify a gender-specific marker using ISSR markers. Fifty-eight ISSR primers were used to characterize the genome of H. rhamnoides ssp. turkestanica, of which eight primers generated 12 sex-specific fragments specific to one or more populations. The ISSR primer (P-45) produced a fragment which faithfully segregates all the males from the female plants across all the three valleys surveyed. This male-specific locus was converted into a SCAR. Forward and reverse primers designed from this fragment amplified a 750-bp sequence in males only, thus specifying it as an informative male-specific sex-linked marker. This SCAR marker was further validated for its capability to differentiate gender on an additional collection of plants, representing three geographically isolated valleys (Nubra, Suru, and Indus) from Ladakh region of India. The results confirmed sex-linked specificity of the marker suggesting that this conserved sequence at the Y chromosome is well preserved through the populations in Ladakh region. At present, there are no reliable markers which can differentiate male from female plants across all the three valleys of Ladakh region at an early stage of plant development. It is therefore envisaged that the developed SCAR marker shall provide a reliable molecular tool for early

  10. Rice DB: an Oryza Information Portal linking annotation, subcellular location, function, expression, regulation, and evolutionary information for rice and Arabidopsis.

    Science.gov (United States)

    Narsai, Reena; Devenish, James; Castleden, Ian; Narsai, Kabir; Xu, Lin; Shou, Huixia; Whelan, James

    2013-12-01

    Omics research in Oryza sativa (rice) relies on the use of multiple databases to obtain different types of information to define gene function. We present Rice DB, an Oryza information portal that is a functional genomics database, linking gene loci to comprehensive annotations, expression data and the subcellular location of encoded proteins. Rice DB has been designed to integrate the direct comparison of rice with Arabidopsis (Arabidopsis thaliana), based on orthology or 'expressology', thus using and combining available information from two pre-eminent plant models. To establish Rice DB, gene identifiers (more than 40 types) and annotations from a variety of sources were compiled, functional information based on large-scale and individual studies was manually collated, hundreds of microarrays were analysed to generate expression annotations, and the occurrences of potential functional regulatory motifs in promoter regions were calculated. A range of computational subcellular localization predictions were also run for all putative proteins encoded in the rice genome, and experimentally confirmed protein localizations have been collated, curated and linked to functional studies in rice. A single search box allows anything from gene identifiers (for rice and/or Arabidopsis), motif sequences, subcellular location, to keyword searches to be entered, with the capability of Boolean searches (such as AND/OR). To demonstrate the utility of Rice DB, several examples are presented including a rice mitochondrial proteome, which draws on a variety of sources for subcellular location data within Rice DB. Comparisons of subcellular location, functional annotations, as well as transcript expression in parallel with Arabidopsis reveals examples of conservation between rice and Arabidopsis, using Rice DB (http://ricedb.plantenergy.uwa.edu.au). © 2013 The Authors The Plant Journal © 2013 John Wiley & Sons Ltd.

  11. Drought resistant rice mutants, characteristics and discussions on possibilities for planting them in some Arab Countries which import rice

    International Nuclear Information System (INIS)

    Abo-Hegazi, A.M.T.

    1994-01-01

    A number of drought resistant mutants of rice were produced from ordinary rice varieties being planted in several parts of Egypt through utilization of gamma rays as a mutagen. The mutants have water requirements less than one half of that of their mother varieties. According to official data, authorities in Egypt insure about 18000 M 3 of irrigation water for every hectare (10000 M 2 ) of rice and about 6700 M 3 , 6900 M 3 for every hectare of corn and ground nuts, respectively. Peanuts and corn are summer crops like the drought resistant rice mutants. The mentioned mutants can produce good yield under water requirements very near to that of corn and peanuts. The wide gap in agricultural food stuffs for the Arab Countries (more than 20000 million US $ annually) includes rice imports usually exceeds 700 million US $ per year> Rice imports of Arab Countries such as Saudi Arabia, Yemen, Syria, Libya and the Sudan, reached 180, 47, 21, 16 and 14 million US $ in 1988 as an example. Such countries could make use of the drought resistant rice mutants for plantation on water requirements very near to those of usual summer crops such as corn and peanuts which is significantly less than one half of water requirements of their mother varieties. Some characteristics of such mutants as well as discussions on possibilities for planting them in some of the nominated Arab Countries are presented. However, arrangements for ensuring the minimum water requirements during the growing period irrespective to rain which in many cases did not accord the growing period of the mutants should be taken if such countries wants to make use of the drought resistant rice mutants. The author believe that most if not all requirements of rice of such countries could locally be ensured through planting of the above mentioned rice mutants. In this case, maximizing the efficiency of utilizing the limited water resources of such countries could also be counted as another cause for presenting this

  12. Testing climate-smart irrigation strategies to reduce methane emissions from rice fields

    Science.gov (United States)

    Runkle, B.; Suvocarev, K.; Reba, M. L.

    2017-12-01

    Approximately 11% of the global 308 Tg CH4 anthropogenic emissions are currently attributed to rice cultivation. In this study, the impact of water conservation practices on rice field CH4 emissions was evaluated in Arkansas, the leading state in US rice cultivation. While conserving water, the Alternate Wetting and Drying (AWD) irrigation practice can also reduce CH4 emissions through the deliberate, periodic introduction of aerobic conditions. Seasonal CH4emissions from a pair of adjacent, production-sized rice fields were estimated and compared during the 2015 to 2017 growing seasons using the eddy covariance method on each field. The fields were alternately treated with continuous flood (CF) and AWD irrigation. In 2015, the seasonal cumulative carbon losses by CH4 emission were 30.3 ± 6.3 and 141.9 ± 8.6 kg CH4-C ha-1 for the AWD and CF treatments, respectively. Data from 2016 and 2017 will be analyzed and shown within this presentation; an initial view demonstrates consistent findings to 2015. When accounting for differences in field conditions and soils, the AWD practice is attributable to a 36-51% reduction in seasonal emissions. The substantial decrease in CH4 emissions by AWD supports previous chamber-based research and offers strong evidence for the efficacy of AWD in reducing CH4 emissions in Arkansas rice production. The AWD practice has enabled the sale of credits for carbon offsets trading and this new market could encourage CH4 emissions reductions on a national scale. These eddy covariance towers are being placed into a regional perspective including crop and forest land in the three states comprising the Mississippi Delta: Arkansas, Mississippi, and Louisiana.

  13. Phytoremediation of arsenic contaminated soil by Pteris vittata L. II. Effect on arsenic uptake and rice yield.

    Science.gov (United States)

    Mandal, Asit; Purakayastha, T J; Patra, A K; Sanyal, S K

    2012-07-01

    A greenhouse experiment evaluated the effect of phytoextraction of arsenic from a contaminated soil by Chinese Brake Fern (Pteris vittata L.) and its subsequent effects on growth and uptake of arsenic by rice (Oryza sativa L.) crop. Pteris vittata was grown for one or two growing cycles of four months each with two phosphate sources, using single super phosphate (SSP) and di-ammonium phosphate (DAP). Rice was grown on phytoextracted soils followed by measurements of biomass yield (grain, straw, and root), arsenic concentration and, uptake by individual plant parts. The biomass yield (grain, straw and rice) of rice was highest in soil phytoextracted with Pteris vittata grown for two cycles and fertilized with diammonium phosphate (DAP). Total arsenic uptake in contaminated soil ranged from 8.2 to 16.9 mg pot(-1) in first growing cycle and 5.5 to 12.0 mg pot(-1) in second growing cycle of Pteris vittata. There was thus a mean reduction of 52% in arsenic content of rice grain after two growing cycle of Pteris vittata and 29% after the one growing cycle. The phytoextraction of arsenic contaminated soil by Pteris vittata was beneficial for growing rice resulted in decreased arsenic content in rice grain of <1 ppm. There was a mean improvement in rice grain yield 14% after two growing cycle and 8% after the one growing cycle of brake fern.

  14. Development of three allele-specific co-Dominant PCR markers suitable for marker-assisted selection of amylose class and paste viscosity of rice

    Science.gov (United States)

    Most rice is consumed as whole kernel cooked rice, and the consumer preferences for cooked rice texture and other sensory properties differ among regions of the world. Rice is also used as an ingredient in a multitude of foods by food-processing companies across the globe. These sensory and function...

  15. Fine mapping and characterization of BPH27, a brown planthopper resistance gene from wild rice (Oryza rufipogon Griff.).

    Science.gov (United States)

    Huang, D; Qiu, Y; Zhang, Y; Huang, F; Meng, J; Wei, S; Li, R; Chen, B

    2013-01-01

    The brown planthopper (Nilaparvata lugens Stål; BPH) is one of the most serious rice pests worldwide. Growing resistant varieties is the most effective way to manage this insect, and wild rice species are a valuable source of resistance genes for developing resistant cultivars. BPH27 derived from an accession of Guangxi wild rice, Oryza rufipogon Griff. (Accession no. 2183, hereafter named GX2183), was primarily mapped to a 17-cM region on the long arm of the chromosome four. In this study, fine mapping of BPH27 was conducted using two BC(1)F(2) populations derived from introgression lines of GX2183. Insect resistance was evaluated in the BC(1)F(2) populations with 6,010 individual offsprings, and 346 resistance extremes were obtained and employed for fine mapping of BPH27. High-resolution linkage analysis defined the BPH27 locus to an 86.3-kb region in Nipponbare. Regarding the sequence information of rice cultivars, Nipponbare and 93-11, all predicted open reading frames (ORFs) in the fine-mapping region have been annotated as 11 types of proteins, and three ORFs encode disease-related proteins. Moreover, the average BPH numbers showed significant differences in 96-120 h after release in comparisons between the preliminary near-isogenic lines (pre-NILs, lines harboring resistance genes) and BaiR54. BPH growth and development were inhibited and survival rates were lower in the pre-NIL plants compared with the recurrent parent BaiR54. The pre-NIL exhibited 50.7% reductions in population growth rates (PGR) compared to BaiR54. The new development in fine mapping of BPH27 will facilitate the efforts to clone this important resistant gene and to use it in BPH-resistance rice breeding.

  16. Study on rice absorption and distribution of Cd in applying Zn fertilizer with 65Zn, 115Cdm tracing technique

    International Nuclear Information System (INIS)

    Tang Nianxin; Shen Jinxiong

    1994-01-01

    Results of study by using 65 Zn and 115 Cd m tracers show that, along with the increase of the amount of Cd in applying Zn fertilizer to soil, rice has the phenomena of growth retard and tiller delay in the earlier growing stage. The inhibiting phenomenon is lightened along with the progress of rice growth. Very small quantity of Cd might be helpful to the growth of rice. It would cause serious inhibition to rice growth when the amount of Cd reaches to a definite limitation (64 x 10 -6 ). The distribution of Cd in a rice plant follows the following order in content: root>stem and leaves>brown rice>ear stalk>rice shell. Cd is mainly accumulated in rice root, taking 90% of the total amount of Cd contained in whole rice plant. The amount of Cd absorbed by rice increases with the amount of Cd applied to soil, though the total absorption extremely low, for example, only about 0.1% of the applied amount could be absorbed by two crops of rice, most of the applied Cd still retains in soil. Less and less Zn could be absorbed and utilized by rice along with the increase of the amount of the applied Cd. Application of Mn fertilizer affects negatively the absorption of Cd by rice, especially in brown rice

  17. Rice yield estimation with multi-temporal Radarsat-2 data

    Science.gov (United States)

    Chen, Chi-Farn; Son, Nguyen-Thanh; Chen, Cheng-Ru

    2015-04-01

    Rice is the most important food crop in Taiwan. Monitoring rice crop yield is thus crucial for agronomic planners to formulate successful strategies to address national food security and rice grain export issues. However, there is a real challenge for this monitoring purpose because the size of rice fields in Taiwan was generally small and fragmented, and the cropping calendar was also different from region to region. Thus, satellite-based estimation of rice crop yield requires the data that have sufficient spatial and temporal resolutions. This study aimed to develop models to estimate rice crop yield from multi-temporal Radarsat-2 data (5 m resolution). Data processing were carried out for the first rice cropping season from February to July in 2014 in the western part of Taiwan, consisting of four main steps: (1) constructing time-series backscattering coefficient data, (2) spatiotemporal noise filtering of the time-series data, (3) establishment of crop yield models using the time-series backscattering coefficients and in-situ measured yield data, and (4) model validation using field data and government's yield statistics. The results indicated that backscattering behavior varied from region to region due to changes in cultural practices and cropping calendars. The highest correlation coefficient (R2 > 0.8) was obtained at the ripening period. The robustness of the established models was evaluated by comparisons between the estimated yields and in-situ measured yield data showed satisfactory results, with the root mean squared error (RMSE) smaller than 10%. Such results were reaffirmed by the correlation analysis between the estimated yields and government's rice yield statistics (R2 > 0.8). This study demonstrates advantages of using multi-temporal Radarsat-2 backscattering data for estimating rice crop yields in Taiwan prior to the harvesting period, and thus the methods were proposed for rice yield monitoring in other regions.

  18. Diversity of global rice markets and the science required for consumer-targeted rice breeding.

    Directory of Open Access Journals (Sweden)

    Mariafe Calingacion

    Full Text Available With the ever-increasing global demand for high quality rice in both local production regions and with Western consumers, we have a strong desire to understand better the importance of the different traits that make up the quality of the rice grain and obtain a full picture of rice quality demographics. Rice is by no means a 'one size fits all' crop. Regional preferences are not only striking, they drive the market and hence are of major economic importance in any rice breeding / improvement strategy. In this analysis, we have engaged local experts across the world to perform a full assessment of all the major rice quality trait characteristics and importantly, to determine how these are combined in the most preferred varieties for each of their regions. Physical as well as biochemical characteristics have been monitored and this has resulted in the identification of no less than 18 quality trait combinations. This complexity immediately reveals the extent of the specificity of consumer preference. Nevertheless, further assessment of these combinations at the variety level reveals that several groups still comprise varieties which consumers can readily identify as being different. This emphasises the shortcomings in the current tools we have available to assess rice quality and raises the issue of how we might correct for this in the future. Only with additional tools and research will we be able to define directed strategies for rice breeding which are able to combine important agronomic features with the demands of local consumers for specific quality attributes and hence, design new, improved crop varieties which will be awarded success in the global market.

  19. Diversity of Global Rice Markets and the Science Required for Consumer-Targeted Rice Breeding

    Science.gov (United States)

    Calingacion, Mariafe; Laborte, Alice; Nelson, Andrew; Resurreccion, Adoracion; Concepcion, Jeanaflor Crystal; Daygon, Venea Dara; Mumm, Roland; Reinke, Russell; Dipti, Sharifa; Bassinello, Priscila Zaczuk; Manful, John; Sophany, Sakhan; Lara, Karla Cordero; Bao, Jinsong; Xie, Lihong; Loaiza, Katerine; El-hissewy, Ahmad; Gayin, Joseph; Sharma, Neerja; Rajeswari, Sivakami; Manonmani, Swaminathan; Rani, N. Shobha; Kota, Suneetha; Indrasari, Siti Dewi; Habibi, Fatemeh; Hosseini, Maryam; Tavasoli, Fatemeh; Suzuki, Keitaro; Umemoto, Takayuki; Boualaphanh, Chanthkone; Lee, Huei Hong; Hung, Yiu Pang; Ramli, Asfaliza; Aung, Pa Pa; Ahmad, Rauf; Wattoo, Javed Iqbal; Bandonill, Evelyn; Romero, Marissa; Brites, Carla Moita; Hafeel, Roshni; Lur, Huu-Sheng; Cheaupun, Kunya; Jongdee, Supanee; Blanco, Pedro; Bryant, Rolfe; Thi Lang, Nguyen; Hall, Robert D.; Fitzgerald, Melissa

    2014-01-01

    With the ever-increasing global demand for high quality rice in both local production regions and with Western consumers, we have a strong desire to understand better the importance of the different traits that make up the quality of the rice grain and obtain a full picture of rice quality demographics. Rice is by no means a ‘one size fits all’ crop. Regional preferences are not only striking, they drive the market and hence are of major economic importance in any rice breeding / improvement strategy. In this analysis, we have engaged local experts across the world to perform a full assessment of all the major rice quality trait characteristics and importantly, to determine how these are combined in the most preferred varieties for each of their regions. Physical as well as biochemical characteristics have been monitored and this has resulted in the identification of no less than 18 quality trait combinations. This complexity immediately reveals the extent of the specificity of consumer preference. Nevertheless, further assessment of these combinations at the variety level reveals that several groups still comprise varieties which consumers can readily identify as being different. This emphasises the shortcomings in the current tools we have available to assess rice quality and raises the issue of how we might correct for this in the future. Only with additional tools and research will we be able to define directed strategies for rice breeding which are able to combine important agronomic features with the demands of local consumers for specific quality attributes and hence, design new, improved crop varieties which will be awarded success in the global market. PMID:24454799

  20. Elemental content of Vietnamese rice. Part 2. Multivariate data analysis.

    Science.gov (United States)

    Kokot, S; Phuong, T D

    1999-04-01

    Rice samples were obtained from the Red River region and some other parts of Vietnam as well as from Yanco, Australia. These samples were analysed for 14 elements (P, K, Mg, Ca, Mn, Zn, Fe, Cu, Al, Na, Ni, As, Mo and Cd) by ICP-AES, ICP-MS and FAAS as described in Part 1. This data matrix was then submitted to multivariate data analysis by principal component analysis to investigate the influences of environmental and crop cultivation variables on the elemental content of rice. Results revealed that geographical location, grain variety, seasons and soil conditions are the most likely significant factors causing changes in the elemental content between the rice samples. To assess rice quality according to its elemental content and physio-biological properties, a multicriteria decision making method (PROMETHEE) was applied. With the Vietnamese rice, the sticky rice appeared to contain somewhat higher levels of nutritionally significant elements such as P, K and Mg than the non-sticky rice. Also, rice samples grown during the wet season have better levels of nutritionally significant mineral elements than those of the dry season, but in general, the wet season seemed to provide better overall elemental and physio-biological rice quality.

  1. Avian foods, foraging and habitat conservation in world rice fields

    Science.gov (United States)

    Stafford, J.D.; Kaminski, R.M.; Reinecke, K.J.

    2010-01-01

    Worldwide, rice (Oryza sativa) agriculture typically involves seasonal flooding and soil tillage, which provides a variety of microhabitats and potential food for birds. Water management in rice fields creates conditions ranging from saturated mud flats to shallow (seed mass from North America ranging from 66672 kg/ha. Although initially abundant after harvest, waste rice availability can be temporally limited. Few abundance estimates for other foods, such as vertebrate prey or forage vegetation, exist for rice fields. Outside North America, Europe and Japan, little is known about abundance and importance of any avian food in rice fields. Currently, flooding rice fields after harvest is the best known management practice to attract and benefit birds. Studies from North America indicate specific agricultural practices (e.g. burning stubble) may increase use and improve access to food resources. Evaluating and implementing management practices that are ecologically sustainable, increase food for birds and are agronomically beneficial should be global priorities to integrate rice production and avian conservation. Finally, land area devoted to rice agriculture appears to be stable in the USA, declining in China, and largely unquantified in many regions. Monitoring trends in riceland area may provide information to guide avian conservation planning in rice-agriculture ecosystems.

  2. Estimation of rice grain yield from dual-polarization Radarsat-2 SAR data by integrating a rice canopy scattering model and a genetic algorithm

    Science.gov (United States)

    Zhang, Yuan; Yang, Bin; Liu, Xiaohui; Wang, Cuizhen

    2017-05-01

    Fast and accurate estimation of rice yield plays a role in forecasting rice productivity for ensuring regional or national food security. Microwave synthetic aperture radar (SAR) data has been proved to have a great potential for rice monitoring and parameters retrieval. In this study, a rice canopy scattering model (RCSM) was revised and then was applied to simulate the backscatter of rice canopy. The combination of RCSM and genetic algorithm (GA) was proposed for retrieving two important rice parameters relating to grain yield, ear length and ear number density, from a C-band, dual-polarization (HH and HV) Radarsat-2 SAR data. The stability of retrieved results of GA inversion was also evaluated by changing various parameter configurations. Results show that RCSM can effectively simulate backscattering coefficients of rice canopy at HH and HV mode with an error of <1 dB. Reasonable selection of GA's parameters is essential for stability and efficiency of rice parameter retrieval. Two rice parameters are retrieved by the proposed RCSM-GA technology with better accuracy. The rice ear length are estimated with error of <1.5 cm, and ear number density with error of <23 #/m2. Rice grain yields are effectively estimated and mapped by the retrieved ear length and number density via a simple yield regression equation. This study further illustrates the capability of C-band Radarsat-2 SAR data on retrieval of rice ear parameters and the practicability of radar remote sensing technology for operational yield estimation.

  3. Rice antioxidants: phenolic acids, flavonoids, anthocyanins, proanthocyanidins, tocopherols, tocotrienols, γ-oryzanol, and phytic acid

    Science.gov (United States)

    Goufo, Piebiep; Trindade, Henrique

    2014-01-01

    Epidemiological studies suggested that the low incidence of certain chronic diseases in rice-consuming regions of the world might be associated with the antioxidant compound contents of rice. The molecules with antioxidant activity contained in rice include phenolic acids, flavonoids, anthocyanins, proanthocyanidins, tocopherols, tocotrienols, γ-oryzanol, and phytic acid. This review provides information on the contents of these compounds in rice using a food composition database built from compiling data from 316 papers. The database provides access to information that would have otherwise remained hidden in the literature. For example, among the four types of rice ranked by color, black rice varieties emerged as those exhibiting the highest antioxidant activities, followed by purple, red, and brown rice varieties. Furthermore, insoluble compounds appear to constitute the major fraction of phenolic acids and proanthocyanidins in rice, but not of flavonoids and anthocyanins. It is clear that to maximize the intake of antioxidant compounds, rice should be preferentially consumed in the form of bran or as whole grain. With respect to breeding, japonica rice varieties were found to be richer in antioxidant compounds compared with indica rice varieties. Overall, rice grain fractions appear to be rich sources of antioxidant compounds. However, on a whole grain basis and with the exception of γ-oryzanol and anthocyanins, the contents of antioxidants in other cereals appear to be higher than those in rice. PMID:24804068

  4. Rice antioxidants: phenolic acids, flavonoids, anthocyanins, proanthocyanidins, tocopherols, tocotrienols, γ-oryzanol, and phytic acid.

    Science.gov (United States)

    Goufo, Piebiep; Trindade, Henrique

    2014-03-01

    Epidemiological studies suggested that the low incidence of certain chronic diseases in rice-consuming regions of the world might be associated with the antioxidant compound contents of rice. The molecules with antioxidant activity contained in rice include phenolic acids, flavonoids, anthocyanins, proanthocyanidins, tocopherols, tocotrienols, γ-oryzanol, and phytic acid. This review provides information on the contents of these compounds in rice using a food composition database built from compiling data from 316 papers. The database provides access to information that would have otherwise remained hidden in the literature. For example, among the four types of rice ranked by color, black rice varieties emerged as those exhibiting the highest antioxidant activities, followed by purple, red, and brown rice varieties. Furthermore, insoluble compounds appear to constitute the major fraction of phenolic acids and proanthocyanidins in rice, but not of flavonoids and anthocyanins. It is clear that to maximize the intake of antioxidant compounds, rice should be preferentially consumed in the form of bran or as whole grain. With respect to breeding, japonica rice varieties were found to be richer in antioxidant compounds compared with indica rice varieties. Overall, rice grain fractions appear to be rich sources of antioxidant compounds. However, on a whole grain basis and with the exception of γ-oryzanol and anthocyanins, the contents of antioxidants in other cereals appear to be higher than those in rice.

  5. A global analysis of alternative tillage and crop establishment practices for economically and environmentally efficient rice production.

    Science.gov (United States)

    Chakraborty, Debashis; Ladha, Jagdish Kumar; Rana, Dharamvir Singh; Jat, Mangi Lal; Gathala, Mahesh Kumar; Yadav, Sudhir; Rao, Adusumilli Narayana; Ramesha, Mugadoli S; Raman, Anitha

    2017-08-24

    Alternative tillage and rice establishment options should aim at less water and labor to produce similar or improved yields compared with traditional puddled-transplanted rice cultivation. The relative performance of these practices in terms of yield, water input, and economics varies across rice-growing regions. A global meta and mixed model analysis was performed, using a dataset involving 323 on-station and 9 on-farm studies (a total of 3878 paired data), to evaluate the yield, water input, greenhouse gas emissions, and cost and net return with five major tillage/crop establishment options. Shifting from transplanting to direct-seeding was advantageous but the change from conventional to zero or reduced tillage reduced yields. Direct-seeded rice under wet tillage was the best alternative with yield advantages of 1.3-4.7% (p Direct-seeding under zero tillage was another potential alternative with high savings in water input and cost of cultivation, with no yield penalty. The alternative practices reduced methane emissions but increased nitrous oxide emissions. Soil texture plays a key role in relative yield advantages, and therefore refinement of the practice to suit a specific agro-ecosystem is needed.

  6. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    Science.gov (United States)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-05-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  7. A Study on Land Suitability for Rice Cultivation in Khordha District of Odisha (India) Using Remote Sensing and GIS

    Science.gov (United States)

    Rath, Sudhansu S.; Panda, Jagabandhu; Annadurai, R.; Nanda, Sachikanta

    2018-02-01

    With the global population on the rise, it is important to address the increasing demand for food. According to FAO (Food and Agriculture Organization, United Nations), by 2050, the developing countries must double their food production to meet the growing demand. Proper land utilization can be one of the solutions for this problem. In view of this, the current study focussed on land suitability analysis for Khordha district of Odisha (India) for rice crop. This study estimated that the amount of land suitable for rice cropping was 195,731 ha against the currently cultivated land of 122,183.38 ha. Therefore, there was a possibility of more amount of land that could be available for rice cultivation in Khordha district than the currently cultivated area. In order to perform this exercise, the land use and land cover data from IRS (Indian remote sensing satellite), soil nutrient parameters like pH values and nitrogen, potassium, phosphorous and organic carbon contents were considered. In addition, the climatic parameters such as near surface temperature, rainfall and number of rainy days were taken into account. The unused land identified in Khordha district in this study might be utilized for cultivating rice crop in this region.

  8. TECHNICAL ECONOMIC FEASIBILITY OF PADDY RICE FIELDS VARIETY OF APPROACH PTT SPECIFIC LOCATIONS IN PAPUA (Case Jayapura

    Directory of Open Access Journals (Sweden)

    Afrizal Malik

    2013-01-01

    Full Text Available Study aims to determine technical economically feasibility of irrigration rice in village of Sumbe, Namblong District, Jayapura on-farm research involving farmers with an area of 2.50 ha cooperators, July to November 2011. Technology introduced: PTT, 4:1 legowo systems, seed varieties Inpari labeled 1, 2, 4, 6, 7, 9, 10, and Sintanur. Fertilizer: urea 150 kg +100 kg +100 kg SP-36 Phonska KCl +50 kg per ha. Variables: height and number of tillers 35 and 65 dap, weight of 1000 seeds, productivity, input, and output. Data were analyzed descriptively. Highest productivity in varieties Inpari 7 (7.925 tonnes per ha Milled Rice (MR and lowest Sintanur varieties (4.625 tonnes per ha MR. Pest stand: rice leaffolder and stinky rice pest. Lowest expenditure on non-cooperators Ciherang farmers IDR 12.15 million per ha per Growing Season (GS and highest in varieties Inpari 7 (IDR 15,005,000 per ha per GS. Lowest Acceptance Ciherang farmers on non-cooperators, IDR 16.4 million per ha per GS and highest in varieties Inpari 7, IDR 27.7 million per ha per GS. If farmers apply recommendation technologies using Inpari 7 varieties, farmers receiving IDR 3,173,750 per month (greater than Regional Minimum Wage of Jayapura. Need government support in order to minimize dependence on outside

  9. Rice (Oryza) hemoglobins

    Science.gov (United States)

    Hemoglobins (Hbs) corresponding to non-symbiotic (nsHb) and truncated (tHb) Hbs have been identified in rice (Oryza). This review discusses the major findings from the current studies on rice Hbs. At the molecular level, a family of the nshb genes, consisting of hb1, hb2, hb3, hb4 and hb5, and a sin...

  10. Optimizing Greenhouse Rice Production: Summary of Recommendations

    OpenAIRE

    Eddy, Robert; Acosta, Kevin; Liu, Yisi; Russell, Michael

    2016-01-01

    This publication provides a single-page chart summarizing our protocols for growing Rice (japonica). Split into three production goals, recommendations are given for photoperiod, temperature, lighting, container, root medium, planting density, irrigation, fertilization, algae control and fungus gnat control. This version updates our fertilization frequency, pot size, root medium and algae control recommendations. This document summarizes a series of questions and answers originally posted ...

  11. Combined influence of Bt rice and rice dwarf virus on biological parameters of a non-target herbivore, Nephotettix cincticeps (Uhler (Hemiptera: Cicadellidae.

    Directory of Open Access Journals (Sweden)

    Qianjin Wang

    Full Text Available The advent of genetically modified (GM Bt rice creates the possibility of interactions among Bt crops, crop pathogens and non-target herbivores. In particular, information on how pathogen-infected Bt-expressing plants will influence non-target herbivores is necessary to predict the sustainability of GM cropping systems. Laboratory bioassays were conducted to evaluate the potential combined impacts of rice dwarf virus (RDV and two Bt rice lines, T1C-19 (Cry1C and T2A-1 (Cry2A, on non-target green rice leafhopper (GRLH, Nephotettix cincticeps (Uhler (Hemiptera: Cicadellidae. In the first experiment, GRLHs feeding preference tests on Bt rice lines compared to a parental control rice line, MH63, were conducted. As rice plants were uninfected with RDV, GRLHs generally preferred the control MH63 line over the two Bt lines during the initial 8 h, with no significant preference during the following 64 h. As rice plants were infected with RDV, there were no clear preferences between the Bt rice lines and the control MH63 line. In the second experiment, we assessed the combined influence of RDV-infection status and Bt rice lines on GRLH biological parameters. Egg duration, adult weights, and male adult longevity were significantly affected on RDV-infected Bt rice. Other parameters, egg hatching rate, nymph survival and fecundity were not significantly influenced. We infer that interaction effect among two testing Bt rice lines and RDV will not lead to enlarged pest populations, thus demonstrating that growing these two Bt rice lines will poses negligible risk to GRLH in sustainable rice agroecosystems. Long-term field experiments to monitor the population dynamics of GRLHs at large scale need to be carried out to confirm the current results.

  12. Combined influence of Bt rice and rice dwarf virus on biological parameters of a non-target herbivore, Nephotettix cincticeps (Uhler) (Hemiptera: Cicadellidae).

    Science.gov (United States)

    Wang, Qianjin; Han, Naishun; Dang, Cong; Lu, Zengbin; Wang, Fang; Yao, Hongwei; Peng, Yufa; Stanley, David; Ye, Gongyin

    2017-01-01

    The advent of genetically modified (GM) Bt rice creates the possibility of interactions among Bt crops, crop pathogens and non-target herbivores. In particular, information on how pathogen-infected Bt-expressing plants will influence non-target herbivores is necessary to predict the sustainability of GM cropping systems. Laboratory bioassays were conducted to evaluate the potential combined impacts of rice dwarf virus (RDV) and two Bt rice lines, T1C-19 (Cry1C) and T2A-1 (Cry2A), on non-target green rice leafhopper (GRLH), Nephotettix cincticeps (Uhler) (Hemiptera: Cicadellidae). In the first experiment, GRLHs feeding preference tests on Bt rice lines compared to a parental control rice line, MH63, were conducted. As rice plants were uninfected with RDV, GRLHs generally preferred the control MH63 line over the two Bt lines during the initial 8 h, with no significant preference during the following 64 h. As rice plants were infected with RDV, there were no clear preferences between the Bt rice lines and the control MH63 line. In the second experiment, we assessed the combined influence of RDV-infection status and Bt rice lines on GRLH biological parameters. Egg duration, adult weights, and male adult longevity were significantly affected on RDV-infected Bt rice. Other parameters, egg hatching rate, nymph survival and fecundity were not significantly influenced. We infer that interaction effect among two testing Bt rice lines and RDV will not lead to enlarged pest populations, thus demonstrating that growing these two Bt rice lines will poses negligible risk to GRLH in sustainable rice agroecosystems. Long-term field experiments to monitor the population dynamics of GRLHs at large scale need to be carried out to confirm the current results.

  13. Classification and Mapping of Paddy Rice by Combining Landsat and SAR Time Series Data

    Directory of Open Access Journals (Sweden)

    Seonyoung Park

    2018-03-01

    Full Text Available Rice is an important food resource, and the demand for rice has increased as population has expanded. Therefore, accurate paddy rice classification and monitoring are necessary to identify and forecast rice production. Satellite data have been often used to produce paddy rice maps with more frequent update cycle (e.g., every year than field surveys. Many satellite data, including both optical and SAR sensor data (e.g., Landsat, MODIS, and ALOS PALSAR, have been employed to classify paddy rice. In the present study, time series data from Landsat, RADARSAT-1, and ALOS PALSAR satellite sensors were synergistically used to classify paddy rice through machine learning approaches over two different climate regions (sites A and B. Six schemes considering the composition of various combinations of input data by sensor and collection date were evaluated. Scheme 6 that fused optical and SAR sensor time series data at the decision level yielded the highest accuracy (98.67% for site A and 93.87% for site B. Performance of paddy rice classification was better in site A than site B, which consists of heterogeneous land cover and has low data availability due to a high cloud cover rate. This study also proposed Paddy Rice Mapping Index (PMI considering spectral and phenological characteristics of paddy rice. PMI represented well the spatial distribution of paddy rice in both regions. Google Earth Engine was adopted to produce paddy rice maps over larger areas using the proposed PMI-based approach.

  14. Contribution of rice straw carbon to CH4 emission from rice paddies using 13C-enriched rice straw

    Science.gov (United States)

    Watanabe, Akira; Yoshida, Mariko; Kimura, Makoto

    1998-04-01

    It is generally recognized that the application of rice straw (RS) increases CH4 emission from rice paddies. To estimate the contribution of RS carbon to CH4 emission, a pot experiment was conducted using 13C-enriched RS. The percentage contributions of RS carbon to CH4 emission throughout the rice growth period were 10±1, 32±3, and 43±3% for the treatments with RS applied at the rates of 2, 4, and 6 g kg-1 soil, respectively. The increase in the rate of application of RS increased CH4 emission derived from both RS carbon and other carbon sources. The percentage contribution of RS carbon to CH4 emission was larger in the earlier period (maximum 96%) when the decomposition rate of RS was larger. After RS decomposition had slowed, CH4 emission derived from RS carbon decreased. However, the δ13C values of CH4 emitted from the pots with 13C-enriched RS applied at rates of 4 and 6 g kg-1 soil were significantly higher than those from the pots with natural RS until the harvesting stage. An increased atom-13C% of roots of rice plants growing in the pots with 6 g kg-1 of 13C-enriched RS at around the maximum tiller number stage and a decrease during the following 2 months suggested that rice plants assimilated RS carbon once and then released a portion of it. This supply of RS carbon from roots may be one of the sources of CH4 in the late period of rice growth.

  15. 7 CFR 457.170 - Cultivated wild rice crop insurance provisions.

    Science.gov (United States)

    2010-01-01

    ... reinsured policies: Cultivated Wild Rice Crop Provisions. 1. Definitions Approved laboratory. A testing.... Cultivated Wild Rice. A member of the grass family Zizania Palustris L., adapted for growing in man-made... for the crop year. Planted acreage. In addition to the definition contained in the Basic Provisions...

  16. Heavy metals screening of rice bran oils and its relation to composition

    Science.gov (United States)

    Rice bran oil contains beneficial compounds that contribute to the high stability of the oil itself, as well as the health of consumers. As a result, rice bran oil has been growing in popularity and is now widely used in many countries. However, concerns have surfaced in recent years related to the ...

  17. Incorporation of Bacterial Blight Resistance Genes Into Lowland Rice Cultivar Through Marker-Assisted Backcross Breeding.

    Science.gov (United States)

    Pradhan, Sharat Kumar; Nayak, Deepak Kumar; Pandit, Elssa; Behera, Lambodar; Anandan, Annamalai; Mukherjee, Arup Kumar; Lenka, Srikanta; Barik, Durga Prasad

    2016-07-01

    Bacterial blight (BB) of rice caused by Xanthomonas oryzae pv. oryzae is a major disease of rice in many rice growing countries. Pyramided lines carrying two BB resistance gene combinations (Xa21+xa13 and Xa21+xa5) were developed in a lowland cultivar Jalmagna background through backcross breeding by integrating molecular markers. In each backcross generation, markers closely linked to the disease resistance genes were used to select plants possessing the target genes. Background selection was continued in those plants carrying resistant genes until BC(3) generation. Plants having the maximum contribution from the recurrent parent genome were selected in each generation and hybridized with the recipient parent. The BB-pyramided line having the maximum recipient parent genome recovery of 95% was selected among BC3F1 plants and selfed to isolate homozygous BC(3)F(2) plants with different combinations of BB resistance genes. Twenty pyramided lines with two resistance gene combinations exhibited high levels of tolerance against the BB pathogen. In order to confirm the resistance, the pyramided lines were inoculated with different X. oryzae pv. oryzae strains of Odisha for bioassay. The genotypes with combination of two BB resistance genes conferred high levels of resistance to the predominant X. oryzae pv. oryzae isolates prevalent in the region. The pyramided lines showed similarity with the recipient parent with respect to major agro-morphologic traits.

  18. Genome-wide association study of salt tolerance at the seed germination stage in rice.

    Science.gov (United States)

    Shi, Yingyao; Gao, Lingling; Wu, Zhichao; Zhang, Xiaojing; Wang, Mingming; Zhang, Congshun; Zhang, Fan; Zhou, Yongli; Li, Zhikang

    2017-05-30

    Improving the salt tolerance of direct-seeding rice at the seed germination stage is a major breeding goal in many Asian rice-growing countries, where seedlings must often establish in soils with a high salt content. Thus, it is important to understand the genetic mechanisms of salt tolerance in rice and to screen for germplasm with salt tolerance at the seed germination stage. Here, we investigated seven seed germination-related traits under control and salt-stress conditions and conducted a genome-wide association study based on the re-sequencing of 478 diverse rice accessions. The analysis used a mixed linear model and was based on 6,361,920 single nucleotide polymorphisms in 478 rice accessions grouped into whole, indica, and non-indica panels. Eleven loci containing 22 significant salt tolerance-associated single nucleotide polymorphisms were identified based on the stress-susceptibility indices (SSIs) of vigor index (VI) and mean germination time (MGT). From the SSI of VI, six major loci were identified, explaining 20.2% of the phenotypic variation. From the SSI of MGT, five major loci were detected, explaining 26.4% of the phenotypic variation. Of these, seven loci on chromosomes 1, 5, 6, 11, and 12 were close to six previously identified quantitative gene loci/genes related to tolerance to salinity or other abiotic stresses. The strongest association region for the SSI of MGT was identified in a ~ 13.3 kb interval (15450039-15,463,330) on chromosome 1, near salt-tolerance quantitative trait loci controlling the Na + : K + ratio, total Na + uptake, and total K + concentration. The strongest association region for the SSI of VI was detected in a ~ 164.2 kb interval (526662-690,854) on chromosome 2 harboring two nitrate transporter family genes (OsNRT2.1 and OsNRT2.2), which affect gene expression under salt stress. The haplotype analysis indicated that OsNRT2.2 was associated with subpopulation differentiation and its minor/rare tolerant haplotype was

  19. The Role of Node Restriction on Cadmium Accumulation in the Brown Rice of 12 Chinese Rice (Oryza sativa L.) Cultivars.

    Science.gov (United States)

    Huang, Gaoxiang; Ding, Changfeng; Guo, Fuyu; Li, Xiaogang; Zhou, Zhigao; Zhang, Taolin; Wang, Xingxiang

    2017-11-29

    For selection or breeding of rice (Oryza sativa L.) cultivars with low Cd affinity, the role of node Cd restriction on Cd accumulation in brown rice was studied. A pot experiment was conducted to investigate the concentration of Cd in different sections of 12 Chinese rice cultivars. The results indicated that the Cd accumulation in the brown rice was mainly dependent on the root or shoot Cd concentration. Among the cultivars with nearly equal shoot Cd concentrations, Cd accumulation in brown rice was mainly dependent on the transport of Cd in the shoot. However, the Cd transport in the shoot was significantly restricted by the nodes, especially by the first node. Furthermore, the area of the diffuse vascular bundle in the junctional region of the flag leaf and the first node was a key contributor to the variations in Cd restriction by the nodes.

  20. [Effects of combined applications of pig manure and chemical fertilizers on CH4 and N2O emissions and their global warming potentials in paddy fields with double-rice cropping].

    Science.gov (United States)

    Wang, Cong; Shen, Jian-Lin; Zheng, Liang; Liu, Jie-Yun; Qin, Hong-Ling; Li, Yong; Wu, Jin-Shui

    2014-08-01

    A field experiment was carried out to study the effects of combined applications of pig manure and chemical fertilizers on CH4 and N2O emissions, which were measured using the static chamber/gas chromatography method, and their global warming potentials in typical paddy fields with double-rice cropping in Hunan province. The results showed that the combined applications of pig manure and chemical fertilizers did not change the seasonal patterns of CH4 and N2O emissions from paddy soils, but significantly changed the magnitudes of CH4 and N2O fluxes in rice growing seasons as compared with sole application of chemical fertilizers. During the two rice growing seasons, the cumulative CH4 emissions for the pig manure and chemical nitrogen (N) fertilizer each contributing to 50% of the total applied N (1/2N + PM) treatment were higher than those for the treatments of no N fertilizer (ON), half amount of chemical N fertilizer (1/2N) and 100% chemical N fertilizer (N) by 54.83%, 33.85% and 43.30%, respectively (P global warming potential (GWP) in both rice growing seasons, which contributed more than 99% to the integrated GWP of CH4 and N2O emissions for all the four treatments. Both GWP and yield-scaled GWP for the treatment of 1/2N + PM were significantly higher than the other three treatments. The yield-scaled GWP for the treatment of 1/2N + PM was higher than those for the N, 1/2N and ON treatments by 58.21%, 26.82% and 20. 63%, respectively. Therefore, combined applications of pig manure and chemical fertilizers in paddy fields would increase the GWP of CH4 and N2O emissions during rice growing seasons and this effect should be considered in regional greenhouse gases emissions inventory.

  1. Mapping paddy rice distribution using multi-temporal Landsat imagery in the Sanjiang Plain, northeast China

    Science.gov (United States)

    XIAO, Xiangming; DONG, Jinwei; QIN, Yuanwei; WANG, Zongming

    2016-01-01

    Information of paddy rice distribution is essential for food production and methane emission calculation. Phenology-based algorithms have been utilized in the mapping of paddy rice fields by identifying the unique flooding and seedling transplanting phases using multi-temporal moderate resolution (500 m to 1 km) images. In this study, we developed simple algorithms to identify paddy rice at a fine resolution at the regional scale using multi-temporal Landsat imagery. Sixteen Landsat images from 2010–2012 were used to generate the 30 m paddy rice map in the Sanjiang Plain, northeast China—one of the major paddy rice cultivation regions in China. Three vegetation indices, Normalized Difference Vegetation Index (NDVI), Enhanced Vegetation Index (EVI), and Land Surface Water Index (LSWI), were used to identify rice fields during the flooding/transplanting and ripening phases. The user and producer accuracies of paddy rice on the resultant Landsat-based paddy rice map were 90% and 94%, respectively. The Landsat-based paddy rice map was an improvement over the paddy rice layer on the National Land Cover Dataset, which was generated through visual interpretation and digitalization on the fine-resolution images. The agricultural census data substantially underreported paddy rice area, raising serious concern about its use for studies on food security. PMID:27695637

  2. Utilização da fitase em dietas com ou sem farelo de arroz desengordurado para suínos em crescimento/terminação Use of phytase in diets with or without defatted rice bran for growing/finishing pigs

    Directory of Open Access Journals (Sweden)

    Maria do Carmo Mohaupt Marques Ludke

    2002-09-01

    Full Text Available Este trabalho foi conduzido com o objetivo de comparar a eficiência de diferentes níveis de fitase em relação à suplementação de fosfato inorgânico (fosfato bicálcico, quando adicionados em dietas sem e com farelo de arroz desengordurado (FAD. Foram utilizados 128 suínos com peso inicial médio de 21,2 ± 2,4 kg, alojados em baias coletivas, para avaliar o desempenho nas fases de crescimento e terminação. Os suínos foram abatidos com peso médio de 95,4 ± 5,3 kg e coletado o osso metacarpo para determinação do cálcio e do fósforo. Foram usados oito tratamentos, sendo quatro dietas sem FAD (milho e farelo de soja e quatro dietas com 30% de inclusão de FAD, nas quais foram adicionados níveis de 0, 750 ou 1000 UF (Unidades de Fitase/kg. Foi observado que adicionar fitase, tanto em dietas sem FAD quanto em dietas com FAD, melhora a disponibilidade do fósforo orgânico. Com os níveis de 750 e 1000 UF/kg adicionados em ambas as dietas, sem suplementação de fosfato bicálcico, não houve prejuízo sobre o desempenho dos animais. Entretanto, as características ósseas são prejudicadas se as dietas com fitase não forem suplementadas com a fonte de fósforo inorgânico.The objective of this work was to compare the efficiency of different levels of phytase with the use of inorganic phosphate (dicalcium phosphate when added to diets with or without defatted rice bran (DRB. One hundred and twenty eight pigs with average initial weight of 21.6 ± 2.4 kg were housed in collective boxes for the pig performance evaluation in the growing and finishing phase. The pigs were slaughtered with an average weight of 95.42 ± 5.3 kg and the metacarpus bones were collected to determine the calcium and phosphorus content. Eight treatments were used with four diets being formulated without DRB (corn-soybean meal and the other four diets with DRB. The phytase levels added in the diets were 0, 750 or 1000 PU/kg of the diet. It was observed that

  3. Growing Safflower in Utah

    OpenAIRE

    Pace, M. G.; Israelsen, C. E.; Creech, E.; Allen, N.

    2015-01-01

    This fact sheet provides information on growing safflower in Utah. It has become popular on dryland farms in rotation with winter wheat. Safflower seed provides three products, oil, meal, and birdseed.

  4. An N-terminal region of a Myb-like protein is involved in its intracellular localization and activation of a gibberellin-inducible proteinase gene in germinated rice seeds.

    Science.gov (United States)

    Sutoh, Keita; Washio, Kenji; Imai, Ryozo; Wada, Masamitsu; Nakai, Tomonori; Yamauchi, Daisuke

    2015-01-01

    The expression of the gene for a proteinase (Rep1) is upregulated by gibberellins. The CAACTC regulatory element (CARE) of the Rep1 promoter is involved in the gibberellin response. We isolated a cDNA for a CARE-binding protein containing a Myb domain in its carboxyl-terminal region and designated the gene Carboxyl-terminal Myb1 (CTMyb1). This gene encodes two polypeptides of two distinctive lengths, CTMyb1L and CTMyb1S, which include or exclude 213 N-terminal amino acid residues, respectively. CTMyb1S transactivated the Rep1 promoter in the presence of OsGAMyb, but not CTMyb1L. We observed an interaction between CTMyb1S and the rice prolamin box-binding factor (RPBF). A bimolecular fluorescence complex analysis detected the CTMyb1S and RPBF complex in the nucleus, but not the CTMyb1L and RPBF complex. The results suggest that the arrangement of the transfactors is involved in gibberellin-inducible expression of Rep1.

  5. Investigation of Hg uptake and transport between paddy soil and rice seeds combining Hg isotopic composition and speciation

    OpenAIRE

    C. Feng; Z. Pedrero; P. Li; B. Du; X. Feng; M. Monperrus; E. Tessier; S. Berail; D. Amouroux

    2016-01-01

    Abstract Human consumption of rice constitutes a potential toxicological risk in mercury (Hg) polluted areas such as Hg mining regions in China. It is recognized to be an important source of Hg for the local human diet considering the efficient bioaccumulation of methylmercury (MeHg) in rice seed. To assess Hg sources and uptake pathways to the rice plants, Hg speciation and isotopic composition were investigated in rice seeds and their corresponding paddy soils from different locations withi...

  6. Hormonal regulation of floret closure of rice (Oryza sativa)

    Science.gov (United States)

    Huang, Youming; Zeng, Xiaochun

    2018-01-01

    Plant hormones play important roles in regulating every aspect of growth, development, and metabolism of plants. We are interested in understanding hormonal regulation of floret opening and closure in plants. This is a particularly important problem for hybrid rice because regulation of flowering time is vitally important in hybrid rice seed production. However, little was known about the effects of plant hormones on rice flowering. We have shown that jasmonate and methyl jasmonate play significant roles in promoting rice floret opening. In this study, we investigated the effects of auxins including indole-3-acidic acid (IAA), indole-3-butyric acid (IBA), 1-naphthalene-acetic acid (NAA), 2,4-dichlorophenoxy acetic acid (2,4-D) and 3,6-dichloro-2-methoxybenzoic acid (DIC) and abscisic acid (ABA) on floret closure of four fertile and three sterile varieties of rice. The results from field studies in three growing seasons in 2013–2015 showed that the percentages of closed florets were significantly lower in plants treated with IAA, IBA, 2,4-D, DIC and NAA and that the durations of floret opening were significantly longer in plants treated with the same auxins. The auxins exhibited time- and concentration-dependant effects on floret closure. ABA displayed opposite effects of auxins because it increased the percentages of floret closure and decreased the length of floret opening of rice varieties. The degree of auxin-inhibiting and ABA-promoting effects on floret closure was varied somewhat but not significantly different among the rice varieties. Endogenous IAA levels were the highest in florets collected shortly before opening followed by a sharp decline in florets with maximal angles of opening and a significant jump of IAA levels shortly after floret closure in both fertile and sterile rice plants. ABA levels showed an opposite trend in the same samples. Our results showed that auxins delayed but ABA promoted the closure of rice floret regardless of the varieties

  7. Hormonal regulation of floret closure of rice (Oryza sativa.

    Directory of Open Access Journals (Sweden)

    Youming Huang

    Full Text Available Plant hormones play important roles in regulating every aspect of growth, development, and metabolism of plants. We are interested in understanding hormonal regulation of floret opening and closure in plants. This is a particularly important problem for hybrid rice because regulation of flowering time is vitally important in hybrid rice seed production. However, little was known about the effects of plant hormones on rice flowering. We have shown that jasmonate and methyl jasmonate play significant roles in promoting rice floret opening. In this study, we investigated the effects of auxins including indole-3-acidic acid (IAA, indole-3-butyric acid (IBA, 1-naphthalene-acetic acid (NAA, 2,4-dichlorophenoxy acetic acid (2,4-D and 3,6-dichloro-2-methoxybenzoic acid (DIC and abscisic acid (ABA on floret closure of four fertile and three sterile varieties of rice. The results from field studies in three growing seasons in 2013-2015 showed that the percentages of closed florets were significantly lower in plants treated with IAA, IBA, 2,4-D, DIC and NAA and that the durations of floret opening were significantly longer in plants treated with the same auxins. The auxins exhibited time- and concentration-dependant effects on floret closure. ABA displayed opposite effects of auxins because it increased the percentages of floret closure and decreased the length of floret opening of rice varieties. The degree of auxin-inhibiting and ABA-promoting effects on floret closure was varied somewhat but not significantly different among the rice varieties. Endogenous IAA levels were the highest in florets collected shortly before opening followed by a sharp decline in florets with maximal angles of opening and a significant jump of IAA levels shortly after floret closure in both fertile and sterile rice plants. ABA levels showed an opposite trend in the same samples. Our results showed that auxins delayed but ABA promoted the closure of rice floret regardless of

  8. Fat-soluble bioactive components in colored rice varieties.

    Science.gov (United States)

    Minatel, Igor Otavio; Han, Sang-Ik; Aldini, Giancarlo; Colzani, Mara; Matthan, Nirupa R; Correa, Camila Renata; Fecchio, Denise; Yeum, Kyung-Jin

    2014-10-01

    Bioactive components in rice vary depending on the variety and growing condition. Fat-soluble components such as γ-oryzanol, tocopherols, tocotrienols, carotenoids, and fatty acids were analyzed in brown, sugary brown, red, and black rice varieties using established high-performance liquid chromatography (HPLC) and GC methodologies. In addition, these colored rice varieties were further analyzed using a high-resolution liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS) (LTQ-Orbitrap XL) to identify the [M-H](-) ions of γ-oryzanol, ranging from m/z 573.3949 to 617.4211. The highest content of tocopherols (α-, 1.5; γ-, 0.5 mg/100 g) and carotenoids (lutein 244; trans-β carotene 25 μg/100 g) were observed in black rice; tocotrienols (α-, 0.07; γ-, 0.14 mg/100 g) in red rice, and γ-oryzanol (115 mg/100 g) in sugary brown rice. In all colored rice varieties, the major fatty acids were palmitic (16:0), oleic (18:1n-9), and linoleic (18:2n-6) acids. When the γ-oryzanol components were further analyzed by LC-MS/MS, 3, 10, 8, and 8 triterpene alcohols or sterol ferulates were identified in brown, sugary brown, red, and black rice varieties, respectively. Such structural identification can lead to the elucidation of biological function of each component at the molecular level. Consumption of colored rice rich in beneficial bioactive compounds may be a useful dietary strategy for achieving optimal health.

  9. Transfer of gaseous iodine from atmosphere to rough rice, brown rice and polished rice

    International Nuclear Information System (INIS)

    Sumiya, Misako; Uchida, Shigeo; Muramatsu, Yasuyuki; Ohmomo, Yoichiro; Yamaguchi, Shuho; Obata, Hitoshi.

    1987-01-01

    Experiments were carried out in order to obtain information required for establishing transfer coefficients of gaseous iodine (I 2 ) to rough rice, brown rice and polished rice. The gaseous iodine deposited on young rice plants before the heading period was scarcely found in the rough rice harvested at the full ripe stage. The biological half life of iodine in hull, however, was much slower than that in leaves of 14 days. The translocation of iodine from leaves and stalks to rough rice was not clearly recognized. Therefore, it was deduced that iodine found in brown rice mainly should originate from that deposited on the hull. The distribution ratios of iodine between rough rice and brown rice, and between brown rice and polished rice were 100:4 and 100:30 on 100 grains basis, respectively. If average normalized deposition velocity (V d(m) ) or derived deposition velocity (V s ) are given, the transfer coefficients of gaseous iodine to rough rice (TF r ), brown rice (TF b ) and polished rice (TF p ) could be calculated. (author)

  10. Seasonal variation of carbon dioxide and methane exchange between rice paddy fields and atmosphere in Japan

    Science.gov (United States)

    Kokubo, R.

    2017-12-01

    Rice paddy fields spread throughout Asia and play an important role in terms of regulating greenhouse gases on the ground. Rice paddies have the potential to either increase or decrease the net balance of greenhouse gases in the atmosphere. In the rice growth period, rice paddy fields are sources of CH4, whereas they generally act as a sink of CO2. However, the behavior of greenhouse gases during fallow periods has not been well understood. A field experiment was conducted at a rice paddy field in Fuchu, central Japan in 2014. We evaluated CO2 and CH4 fluxes in the rice paddy field using the eddy covariance method. Except for 20 days after transplanting (DAT), temporal CO2 fluxes showed negative values during a rice growth period whereas they showed positive values throughout a fallow period. The positive CO2 fluxes at 2 emissions by respiration of rice plants and soil microorganisms than CO2 uptake by photosynthesis of rice plants. In the middle of the growing season at around DAT=50, CO2 emission became dominant again because flooded water was temporarily drained in the rice paddy field. Seasonal CH4 fluxes during a growth period were regulated by water management and plant growth stages. During a fallow period, however, the field was kept a non-flooded condition that resulted in an aerobic soil condition and thus very low CH4 emission.

  11. Water management practices affect arsenic and cadmium accumulation in rice grains.

    Science.gov (United States)

    Sun, Liming; Zheng, Manman; Liu, Hongyan; Peng, Shaobing; Huang, Jianliang; Cui, Kehui; Nie, Lixiao

    2014-01-01

    Cadmium (Cd) and arsenic (As) accumulation in rice grains is a great threat to its productivity, grain quality, and thus human health. Pot and field studies were carried out to unravel the effect of different water management practices (aerobic, aerobic-flooded, and flooded) on Cd and As accumulation in rice grains of two different varieties. In pot experiment, Cd or As was also added into the soil as treatment. Pots without Cd or As addition were maintained as control. Results indicated that water management practices significantly influenced the Cd and As concentration in rice grains and aerobic cultivation of rice furnished less As concentration in its grains. Nonetheless, Cd concentration in this treatment was higher than the grains of flooded rice. Likewise, in field study, aerobic and flooded rice cultivation recorded higher Cd and As concentration, respectively. However, growing of rice in aerobic-flooded conditions decreased the Cd concentration by 9.38 times on average basis as compared to aerobic rice. Furthermore, this treatment showed 28% less As concentration than that recorded in flooded rice cultivation. The results suggested that aerobic-flooded cultivation may be a promising strategy to reduce the Cd and As accumulations in rice grains simultaneously.

  12. Looking Inward to the Use of Unmanned Aerial Vehicle (UAV) for Rice Production Assessment in Indonesia

    Science.gov (United States)

    Komaladara, A. A. S. P.; Ambarawati, I. G. A. A.; Wijaya, I. M. A. S.; Hongo, C.; Mirah Adi, A. A. A.

    2015-12-01

    Rice is the main source of carbohydrate for most Indonesians. Rice production has been very dynamic due to improved infrastructure, research and development, and better farm management. However, rice production is susceptible to loss caused by drought, pest and disease attack and climate change. With the growing concern on sustainable and self-reliance food production in the country, there is an urgency to encourage research and efforts to increase rice productivity. Attempts to provide spatial distribution of rice fields on high resolution optical remote sensing data have been employed to some extent, however this technology could be costly. The use of UAV has been introduced to estimate damage ratio in rice crop recently in Indonesia. This technology is one of the ways to estimate rice production quicker, cost-saving and before harvesting time. This study aims to analyze spatio temporal and damage ratio of rice crop using UAV in Indonesia. The study empirically presents the use of UAV (Phantom 2 Vision +) on rice fields to the soil condition and development of management zone map in Bali as an example. The study concludes that the use of UAV allows researchers to pin point characteristics of crop and land in a specific area of a farm. This will then allow researchers to assist farmers in implementing specific and appropriate solutions to production issues. Key words: UAV, rice production, damage ratio

  13. Assessment of rice yield loss due to exposure to ozone pollution in Southern Vietnam

    Energy Technology Data Exchange (ETDEWEB)

    Danh, Ngo Thanh; Huy, Lai Nguyen; Oanh, Nguyen Thi Kim, E-mail: kimoanh@ait.ac.th

    2016-10-01

    The study domain covered the Eastern region of Southern of Vietnam that includes Ho Chi Minh City (HCMC) and five other provinces. Rice production in the domain accounted for 13% of the national total with three crop cycles per year. We assessed ozone (O{sub 3}) induced rice production loss in the domain for 2010 using simulated hourly surface O{sub 3} concentrations (WRF/CAMx; 4 km resolution). Simulated O{sub 3} was higher in January–February (largely overlaps the first crop) and September–December (third crop), and lower in March–June (second crop). Spatially, O{sub 3} was higher in downwind locations of HCMC and were comparable with observed data. Relative yield loss (RYL) was assessed for each crop over the respective growing period (105 days) using three metrics: AOT40, M7 and flux-based O{sub 3} dose of POD{sub 10}. Higher RYL was estimated for the downwind of HCMC. Overall, the rice production loss due to O{sub 3} exposure in the study domain in 2010 was the highest for the first crop (up to 25,800 metric tons), the second highest for the third crop (up to 21,500 tons) and the least for the second crop (up to 6800 tons). The low RYL obtained for the second crop by POD{sub 10} may be due to the use of a high threshold value (Y = 10 nmol m{sup −2} s{sup −1}). Linear regression between non-null radiation POD{sub 0} and POD{sub 10} had similar slopes for the first and third crop when POD{sub 0} was higher and very low slope for the second crop when POD{sub 0} was low. The results of this study can be used for the rice crop planning to avoid the period of potential high RYL due to O{sub 3} exposure. - Highlights: • Simulated O{sub 3} was used to assess rice yield loss in a domain of Southern Vietnam. • Exposure metrics of AOT40, M7, POD{sub 0} and POD{sub 10} were considered. • POD{sub 10} gave the highest rice production loss. • Higher production loss was found downwind of Ho Chi Minh City.

  14. Assessment of rice yield loss due to exposure to ozone pollution in Southern Vietnam

    International Nuclear Information System (INIS)

    Danh, Ngo Thanh; Huy, Lai Nguyen; Oanh, Nguyen Thi Kim

    2016-01-01

    The study domain covered the Eastern region of Southern of Vietnam that includes Ho Chi Minh City (HCMC) and five other provinces. Rice production in the domain accounted for 13% of the national total with three crop cycles per year. We assessed ozone (O 3 ) induced rice production loss in the domain for 2010 using simulated hourly surface O 3 concentrations (WRF/CAMx; 4 km resolution). Simulated O 3 was higher in January–February (largely overlaps the first crop) and September–December (third crop), and lower in March–June (second crop). Spatially, O 3 was higher in downwind locations of HCMC and were comparable with observed data. Relative yield loss (RYL) was assessed for each crop over the respective growing period (105 days) using three metrics: AOT40, M7 and flux-based O 3 dose of POD 10 . Higher RYL was estimated for the downwind of HCMC. Overall, the rice production loss due to O 3 exposure in the study domain in 2010 was the highest for the first crop (up to 25,800 metric tons), the second highest for the third crop (up to 21,500 tons) and the least for the second crop (up to 6800 tons). The low RYL obtained for the second crop by POD 10 may be due to the use of a high threshold value (Y = 10 nmol m −2 s −1 ). Linear regression between non-null radiation POD 0 and POD 10 had similar slopes for the first and third crop when POD 0 was higher and very low slope for the second crop when POD 0 was low. The results of this study can be used for the rice crop planning to avoid the period of potential high RYL due to O 3 exposure. - Highlights: • Simulated O 3 was used to assess rice yield loss in a domain of Southern Vietnam. • Exposure metrics of AOT40, M7, POD 0 and POD 10 were considered. • POD 10 gave the highest rice production loss. • Higher production loss was found downwind of Ho Chi Minh City.

  15. Compressive Strength Of Rice Husk Ash-Cement Sandcrete Blocks ...

    African Journals Online (AJOL)

    There is growing demand for alternative, low-cost building material in developing countries. The effect of partial substitution of ordinary Portland cement with Rice Husk Ash (RHA) on the compressive strength of hollow sandcrete block was investigated through laboratory experimental procedures. The specific gravity, initial ...

  16. Not just a grain of rice: the quest for quality

    NARCIS (Netherlands)

    Fizgerald, M.A.; McCouch, S.R.; Hall, R.D.

    2009-01-01

    A better understanding of the factors that contribute to the overall grain quality of rice (Oryza sativa) will lay the foundation for developing new breeding and selection strategies for combining high quality, with high yield. This is necessary to meet the growing global demand for high quality

  17. The competitiveness of domestic rice production in East Africa: A domestic resource cost approach in Uganda

    Directory of Open Access Journals (Sweden)

    Masao Kikuchi

    2016-03-01

    Full Text Available The rapid increase of rice imports in sub-Saharan Africa under the unstable situation in the world rice market during the 2000s has made it an important policy target for the countries in the region to increase self-sufficiency in rice in order to enhance food security. Whether domestic rice production can be competitive with imported rice is a serious question in East African countries that lie close, just across the Arabian Sea, to major rice exporting countries in South Asia. This study investigates the international competitiveness of domestic rice production in Uganda in terms of the domestic resource cost ratio. The results show that rainfed rice cultivation, which accounts for 95% of domestic rice production, does not have a comparative advantage with respect to rice imported from Pakistan, the largest supplier of imported rice to Uganda. However, the degree of non-competitiveness is not serious, and a high possibility exists for Uganda’s rainfed rice cultivation to become internationally competitive by improving yield levels by applying more modern inputs and enhancing labour productivity. Irrigated rice cultivation, though very limited in area, is competitive even under the present input-output structure when the cost of irrigation infrastructure is treated as a sunk cost. If the cost of installing irrigation infrastructure and its operation and maintenance is taken into account, the types of irrigation development that are economically feasible are not large-scale irrigation projects, but are small- and microscale projects for lowland rice cultivation and rain-water harvesting for upland rice cultivation.

  18. Logistics cost analysis of rice residues for second generation bioenergy production in Ghana.

    Science.gov (United States)

    Vijay Ramamurthi, Pooja; Cristina Fernandes, Maria; Sieverts Nielsen, Per; Pedro Nunes, Clemente

    2014-12-01

    This study explores the techno-economic potential of rice residues as a bioenergy resource to meet Ghana's energy demands. Major rice growing regions of Ghana have 70-90% of residues available for bioenergy production. To ensure cost-effective biomass logistics, a thorough cost analysis was made for two bioenergy routes. Logistics costs for a 5 MWe straw combustion plant were 39.01, 47.52 and 47.89 USD/t for Northern, Ashanti and Volta regions respectively. Logistics cost for a 0.25 MWe husk gasification plant (with roundtrip distance 10 km) was 2.64 USD/t in all regions. Capital cost (66-72%) contributes significantly to total logistics costs of straw, however for husk logistics, staff (40%) and operation and maintenance costs (46%) dominate. Baling is the major processing logistic cost for straw, contributing to 46-48% of total costs. Scale of straw unit does not have a large impact on logistic costs. Transport distance of husks has considerable impact on logistic costs. Copyright © 2014 Elsevier Ltd. All rights reserved.

  19. Logistics cost analysis of rice residues for second generation bioenergy production in Ghana

    DEFF Research Database (Denmark)

    Vijay Ramamurthi, Pooja; Cristina Fernandes, Maria; Nielsen, Per Sieverts

    2014-01-01

    This study explores the techno-economic potential of rice residues as a bioenergy resource to meet Ghana’s energy demands. Major rice growing regions of Ghana have 70–90% of residues available for bioenergy production. To ensure cost-effective biomass logistics, a thorough cost analysis was made...... for two bioenergy routes. Logistics costs for a 5MWe straw combustion plant were 39.01, 47.52 and 47.89USD/t for Northern, Ashanti and Volta regions respectively. Logistics cost for a 0.25MWe husk gasification plant (with roundtrip distance 10km) was 2.64USD/t in all regions. Capital cost (66......–72%) contributes significantly to total logistics costs of straw, however for husk logistics, staff (40%) and operation and maintenance costs (46%) dominate. Baling is the major processing logistic cost for straw, contributing to 46–48% of total costs. Scale of straw unit does not have a large impact on logistic...

  20. Prevalence of Rice Yellow Mottle Virus (RYMV) on Rice Plants ...

    African Journals Online (AJOL)

    Abstract. Incidence of Rice yellow mottle virus (RYMV) on rice plants (ofada) grown in two local government areas (LGAs) of Ogun State had been evaluated during a two year field survey. Six month old rice plants were observed for symptom expression and leaf samples collected for serological indexing. Of the 60 leaf ...

  1. Mapping Changes in Area and the Cropping Season of Irrigated Rice in Senegal and Mauritania between 2003 and 2014 Using the PhenoRice Algorithm and MODIS Imagery

    Science.gov (United States)

    Zwart, S.; Busetto, L.; Diagne, M.; Boschetti, M.; Nelson, A.

    2017-12-01

    Government policies have resulted in rapid expansion of irrigated rice area in Mauritania and Senegal through private and public investments. Farmers switch rice cultivation from the wet to the dry season to achieve higher production while rice double cropping is increasingly practiced. As a result Senegal is close to attaining self-sufficiency in the coming years. However, tools to monitor those changes are absent and this inhibits assessments on for example its impact on wetlands located in the delta area, increased water demands and climate induced risks to farmers. In this study we aimed to map changes in irrigated rice area in the wet and dry seasons. We applied the PhenoRice algorithm on a combined time-series of MODIS Aqua and Terra images obtained between 2003 and 2016 to map pixels dominated by rice and determine the start, end and length of the growing season from sowing/transplanting to maturity. Between 2002 and 2010 researchers from the Africa Rice Center interviewed annually around 100 rice farmers located in two irrigation schemes in Senegal. We extracted the reported sowing/transplanting and harvest dates from the data base and used these to validate the estimates obtained by PhenoRice. We also compared the obtained rice areas with official statistics provided by the Senegalese Ministry of Agriculture. Analysis of PhenoRice results highlighted that starting 2008, rice farmers cultivate also during the dry season; the area is steadily increasing from 2008 onwards and in the recent years approximately almost equals that of the wet season. This was confirmed by official statistics, though the total area estimated by PhenoRice is smaller than reported, most likely due to the mismatch between pixel size and the small cultivated areas. However, the algorithm was able to detect the overall trends and inter-annual variations observed in the wet (r2=0.57) and dry season rice cultivated area (r2=0.91). The start of the season, that varied maximally 4 weeks

  2. Defined fungal starter granules for purple glutinous rice wine

    NARCIS (Netherlands)

    Ngo Thi Phuong Dung, N.T.P.

    2004-01-01

    The Mekong Delta region ofregion>South Vietnamregion>is particularly known as a production area of purple glutinous rice wine ( RuouNepThan ). The latter differs from regular

  3. 7 CFR 868.310 - Grades and grade requirements for the classes Long Grain Milled Rice, Medium Grain Milled Rice...

    Science.gov (United States)

    2010-01-01

    ... Grain Milled Rice, Medium Grain Milled Rice, Short Grain Milled Rice, and Mixed Milled Rice. (See also Â... Milled Rice Principles Governing Application of Standards § 868.310 Grades and grade requirements for the classes Long Grain Milled Rice, Medium Grain Milled Rice, Short Grain Milled Rice, and Mixed Milled Rice...

  4. Secretome of Aspergillus oryzae in Shaoxing rice wine koji.

    Science.gov (United States)

    Zhang, Bo; Guan, Zheng-Bing; Cao, Yu; Xie, Guang-Fa; Lu, Jian

    2012-04-16

    Shaoxing rice wine is the most famous and representative Chinese rice wine. Aspergillus oryzae SU16 is used in the manufacture of koji, the Shaoxing rice wine starter culture. In the current study, a comprehensive analysis of the secretome profile of A. oryzae SU16 in Shaoxing rice wine koji was performed for the first time. The proteomic analysis for the identification of the secretory proteins was done using two-dimensional electrophoresis combined with matrix-assisted laser desorption/ionization-tandem time of flight mass spectrometry based on the annotated A. oryzae genome sequence. A total of 41 unique proteins were identified from the secretome. These proteins included 17 extracellular proteins following the classical secretory pathway, and 10 extracellular proteins putatively secreted by the non-classical secretory pathway. The present secretome profile greatly differed from previous reports on A. oryzae growing in other solid-state nutrient sources. Several new secretory or putative secretory proteins were also found. These proteomic data will significantly aid the advancement of research on the secretome of A. oryzae, especially in solid-state cultures, and in elucidating the production process mechanism of Shaoxing rice wine koji. The findings may promote the technological development and innovation of the Shaoxing rice wine industry. Copyright © 2012 Elsevier B.V. All rights reserved.

  5. Growing Plants and Minds

    Science.gov (United States)

    Presser, Ashley Lewis; Kamdar, Danae; Vidiksis, Regan; Goldstein, Marion; Dominguez, Ximena; Orr, Jillian

    2017-01-01

    Many preschool classrooms explore plant growth. However, because many plants take a long time to grow, it is often hard to facilitate engagement in some practices (i.e., since change is typically not observable from one day to another, children often forget their prior predictions or cannot recall what plants looked like days or weeks earlier).…

  6. Growing Backyard Textiles

    Science.gov (United States)

    Nelson, Eleanor Hall

    1975-01-01

    For those involved in creative work with textiles, the degree of control possible in texture, finish, and color of fiber by growing and processing one's own (perhaps with students' help) can make the experience rewarding. The author describes the processes for flax and nettles and gives tips on necessary equipment. (Author/AJ)

  7. Extraction of rice bran oil from local rice husk

    International Nuclear Information System (INIS)

    Anwar, J.; Zaman, W.; Salman, M.; Jabeen, N.

    2006-01-01

    Rice Bran Oil is widely used in pharmaceutical, food and chemical industries due to its unique properties and high medicinal value. In the present work, extraction of rice bran oil from different samples of rice husk collected from local rice shellers by solvent extraction method has been studied. Experiments were conducted using a soxhelt apparatus, to extract rice bran oil using hexane, petroleum ether, ethanol and methanol as the solvents and the yields obtained under different conditions were compared. Batch extraction tests showed that the rate of extraction decreases with time and the solution approaches saturation at an exponential rate. (author)

  8. Weed communities of rain-fed lowland rice vary with infestation by Rhamphicarpa fistulosa

    Science.gov (United States)

    Houngbédji, Tossimidé; Dessaint, Fabrice; Nicolardot, Bernard; Shykoff, Jacqui A.; Gibot-Leclerc, Stéphanie

    2016-11-01

    The facultative hemiparasitic plant Rhamphicarpa fistulosa (Orobanchaceae) thrives in seasonally wet soils in sub-Saharan Africa, mainly in marginal lowland rice growing environments where weeds are already a major constraint for rice production. Because lowland rice production is increasing in tropical Africa, it is important to ascertain the influence of R. fistulosa on weed plant communities in these rice-growing habitats. We investigated weed plant community richness and composition at four different levels of R. fistulosa infestation across two years of surveys from lowland rice fields in northern Togo (West Africa). Despite a lack of significant differences in community richness among sites with different R. fistulosa infestation levels, there were significant differences in community composition, both when estimated from presence-absence data and from relative abundance data, after controlling statistically for geographic proximity among sites. Rhamphicarpa fistulosa infestation, therefore, may influence the competitive balance between rice and its weeds and shape weed community structure. However, experimental studies are required to elucidate the weed host range of R. fistulosa and the direct and indirect effects of this hemiparasite in rice fields in order to predict its net impact on rice and its weed species.

  9. Global Rice Watch: Spatial-temporal dynamics, driving factors, and impacts of paddy rice agriculture in the world

    Science.gov (United States)

    Xiao, X.; Dong, J.; Zhang, G.; Xin, F.; Li, X.

    2017-12-01

    Paddy rice croplands account for more than 12% of the global cropland areas, and provide food to feed more than 50% of the world population. Spatial patterns and temporal dynamics of paddy rice croplands have changed remarkably in the past decades, driven by growing human population and their changing diet structure, land use (e.g., urbanization, industrialization), climate, markets, and technologies. In this presentation, we will provide a comprehensive review of our current knowledge on (1) the spatial patterns and temporal dynamics of paddy rice croplands from agricultural statistics data and remote sensing approaches; (2) major driving factors for the observed changes in paddy rice areas, including social, economic, climate, land use, markets, crop breeding technology, and farming technology; and (3) major impacts on atmospheric methane concentration, land surface temperature, water resources and use, and so on. We will highlight the results from a few case studies in China and monsoon Asia. We will also call for a global synthesis analysis of paddy rice agriculture, and invite researchers to join the effort to write and edit a book that provides comprehensive and updated knowledge on paddy rice agriculture.

  10. Stomatal conductance, mesophyll conductance, and trans piration efficiency in relation to leaf anatomy in rice and wheat genotypes under drought

    NARCIS (Netherlands)

    Ouyang, Wenjing; Struik, Paul C.; Yin, Xinyou; Yang, Jianchang

    2017-01-01

    Increasing leaf transpiration efficiency (TE) may provide leads for growing rice like dryland cereals such as wheat (Triticum aestivum). To explore avenues for improving TE in rice, variations in stomatal conductance (g s) and mesophyll conductance (g m) and their anatomical determinants were

  11. Radiation use efficiency of rice under different planting methods and environmental conditions

    International Nuclear Information System (INIS)

    Apakupakul, R.

    1995-01-01

    Radiation use efficiency is an important parameter which has often been used in many crop growth models to estimate total biomass and yield. Studies of the relationships between above-ground biomass and accumulative absorbed photosynthetically active radiation (PARa, MJ/square m) of rice were examined both on-farms and on-station in Phatthalung. Planting methods were wet-sown and transplanted rice for Suphanburi 90 in the 1993 dry season and Chieng in the 1993-94 wet season. Solar radiation of the two growing seasons were calculated from climatic data. The objectives of this experiment were (1) to know the pattern of relationship between above-ground biomass and accumulative absorbed PAR of rice cultivars grown in South Thailand, (2) to compare the radiation use efficiency of rice cultivars under different planting methods and (3) to obtain the primary data for rice growth modelling in the southern climate. Results presented that only the duration of first growing period up to stem elongation in both cultivars, above-ground biomass and leaf area index were higher in wet-sown than in transplanted rice. Relationship between above-ground biomass accumulation through growing period and accumulative absorbed PAR was in positive linear regression with R*[2)0.85. Erect leaf of Suphanburi 90 had a radiation use efficiency (RUE, g/MJ) higher than non-erect leaf of Chieng. A problem of weed infestation in wet-sown rice in both cultivars had an effect on the RUE which were highly significant lower than transplanted rice. The Rue of wet-sown and transplanted rice were 2.77 and 3.20 g/MJ, respectively for Suphanburi 90, 2.13 and 2.67 g/MJ for Chieng. These results suggest that when dealing with radiation use efficiency in the rice growth modelling the differences of cultivars and planting methods should be taken into consideration

  12. Mapping rice-fallow cropland areas for short-season grain legumes intensification in South Asia using MODIS 250 m time-series data

    Science.gov (United States)

    Gumma, Murali Krishna; Thenkabail, Prasad S.; Teluguntla, Pardhasaradhi G.; Rao, Mahesh N.; Mohammed, Irshad A.; Whitbread, Anthony M.

    2016-01-01

    The goal of this study was to map rainfed and irrigated rice-fallow cropland areas across South Asia, using MODIS 250 m time-series data and identify where the farming system may be intensified by the inclusion of a short-season crop during the fallow period. Rice-fallow cropland areas are those areas where rice is grown during the kharif growing season (June–October), followed by a fallow during the rabi season (November–February). These cropland areas are not suitable for growing rabi-season rice due to their high water needs, but are suitable for a short -season (≤3 months), low water-consuming grain legumes such as chickpea (Cicer arietinum L.), black gram, green gram, and lentils. Intensification (double-cropping) in this manner can improve smallholder farmer’s incomes and soil health via rich nitrogen-fixation legume crops as well as address food security challenges of ballooning populations without having to expand croplands. Several grain legumes, primarily chickpea, are increasingly grown across Asia as a source of income for smallholder farmers and at the same time providing rich and cheap source of protein that can improve the nutritional quality of diets in the region. The suitability of rainfed and irrigated rice-fallow croplands for grain legume cultivation across South Asia were defined by these identifiers: (a) rice crop is grown during the primary (kharif) crop growing season or during the north-west monsoon season (June–October); (b) same croplands are left fallow during the second (rabi) season or during the south-east monsoon season (November–February); and (c) ability to support low water-consuming, short-growing season (≤3 months) grain legumes (chickpea, black gram, green gram, and lentils) during rabi season. Existing irrigated or rainfed crops such as rice or wheat that were grown during kharif were not considered suitable for growing during the rabi season, because the moisture/water demand of these crops is too high. The

  13. Development of a real-time hydrological cycle - rice growth coupled simulation system as a tool for farmers' decision making in an ungauged basin in Cambodia for the better agricultural water resources management

    Science.gov (United States)

    Tsujimoto, K.; Ohta, T.; Yasukawa, M.; Koike, T.; Kitsuregawa, M.; Homma, K.

    2013-12-01

    The entire country of Cambodia depends on agriculture for its economy. Rice is the staple food, making it the major agricultural product (roughly 80% of total national production). The target area of this study is western Cambodia, where rice production is the greatest in the country and most land is rainfed. Since most farmers rely only on their (non-science-based) experience, they would not adjust to changing rainfall and degraded water resources under climate change, so food security in the region would be seriously threatened (Monichoth et al., 2013). Under this condition, irrigation master plans are being considered by several ODA projects. This study aims to contribute to the design of such irrigation plans through the development of a real-time hydrological cycle - rice growth coupled simulation system. The purpose of the development of this system is to support decision making 1) for determining the necessary agricultural water resources and 2) for allocating limited water resources to various sectors. Rice growing condition as affected by water stress due to the water shortage is supposed to be shown for both of the cases with and without irrigation for several rainfall patterns. A dynamically coupled model of a distributed hydrological model (WEB-DHM., Wang et al., 2009) and a rice growth model (SIMRIW-rainfed, Homma et al., 2009) has been developed with a simple irrigation model. The target basin, a small basin in western Cambodia, is basically an ungauged basin and the model was validated by soil moisture, LAI, dry matter production of the rice crop, and rice yield, using both intensive field observation and satellite observations. Calibrating hourly satellite precipitation dataset (GSMaP/NRT) using ground rain gauges, hydrological cycle (soil moisture at three layers, river discharge, irrigatable water amount, water level of each paddy field, water demand of each paddy field, etc.) and rice growth (LAI, developmental index of the rice crop, dry matter

  14. Gasification of rice husks

    Energy Technology Data Exchange (ETDEWEB)

    Marzetti, P. (ENEA, Rome (Italy). Dipt. Fonti Alternative e Risparmio Energetico)

    The paper outlines the thermochemical processes and equipment involved in the gasification of rice husks. An assessment is made of the feasibility (availability, technology requirements, economics of production and marketing) of this renewable energy source. Results, reported here in tabular form, of experimental trials at an Italian pilot plant (producing, with the use of 165 kg/h of rice husks, 350,000 kcal/h of gas with a conversion yield of 70%) indicated good feasibility. More research is required to improve the combustion qualities of the final product.

  15. Structure, Function, and Evolution of Rice Centromeres

    Energy Technology Data Exchange (ETDEWEB)

    Jiang, Jiming

    2010-02-04

    The centromere is the most characteristic landmark of eukaryotic chromosomes. Centromeres function as the site for kinetochore assembly and spindle attachment, allowing for the faithful pairing and segregation of sister chromatids during cell division. Characterization of centromeric DNA is not only essential to understand the structure and organization of plant genomes, but it is also a critical step in the development of plant artificial chromosomes. The centromeres of most model eukaryotic species, consist predominantly of long arrays of satellite DNA. Determining the precise DNA boundary of a centromere has proven to be a difficult task in multicellular eukaryotes. We have successfully cloned and sequenced the centromere of rice chromosome 8 (Cen8), representing the first fully sequenced centromere from any multicellular eukaryotes. The functional core of Cen8 spans ~800 kb of DNA, which was determined by chromatin immunoprecipitation (ChIP) using an antibody against the rice centromere-specific H3 histone. We discovered 16 actively transcribed genes distributed throughout the Cen8 region. In addition to Cen8, we have characterized eight additional rice centromeres using the next generation sequencing technology. We discovered four subfamilies of the CRR retrotransposon that is highly enriched in rice centromeres. CRR elements are constitutively transcribed and different CRR subfamilies are differentially processed by RNAi. These results suggest that different CRR subfamilies may play different roles in the RNAi-mediated pathway for formation and maintenance of centromeric chromatin.

  16. Analyzing the impact of price subsidy on rice self-sufficiency level in Malaysia: A preliminary finding

    Science.gov (United States)

    Rahim, Farah Hanim Abdul; Abidin, Norhaslinda Zainal; Hawari, Nurul Nazihah

    2017-11-01

    The Malaysian government had targeted for the rice industry in the country to achieve 100% rice self-sufficiency where Malaysia's rice self-sufficiency level (SSL) is currently at 65% to 75%. Thus, the government had implemented few policies to increase the rice production in Malaysia in order to meet the growing demand of rice. In this paper, the effect of price support on the rice production system in Malaysia is investigated. This study utilizes the system dynamics approach of the rice production system in Malaysia where the complexity of the factor is interrelated and changed dynamically through time. Scenario analysis was conducted using system dynamics model by making changes on the price subsidy to see its effect on the rice production and rice SSL. The system dynamics model provides a framework for understanding the effect of price subsidy on the rice self-sufficiency level. The scenario analysis of the model shows that a 50% increase in the price subsidy leads to a substantial increase in demand as the rice price drops. Accordingly, the local production increases by 15%. However, the SSL slightly decreases as the local production is insufficient to meet the large demand.

  17. Water Footprint Analysis of Paddy Rice and the Nexus of Water-Land-Rice in Taiwan: 2005-2014

    Science.gov (United States)

    Wu, T. C.

    2018-05-01

    This paper explores the water footprint (WF) of paddy rice and the nexus of water-land-food (rice) in Taiwan. The research results indicate that the average annual rice WF for the years 2005-2014 was about 7,580 m3/ton, of which 80% was blue, 17% was green, and 3% was grey. This average annual footprint was about 5.7 times larger than the 2000-2004 average annual WF of rice for countries around the globe of 1325 m3/ton, of which 48% was green, 44% was blue, and 8% was grey. The blue WF is the most important source of water for rice production in Taiwan. The water consumption of the second crop is higher than that of the first crop. The water use efficiency in the southern region of Taiwan is the best, while the northern part of Taiwan exhibits relatively high inefficiency. The rates of change in cultivated land and rice production in Taiwan are decreasing in a stable manner. However, the annual rate of change in the rice WF is unstable. The nexus of land, water, and food should be taken into consideration to protect water availability, maintain agricultural production, and avoid land degradation. The results could offer useful information for agriculture policy and water resource management.

  18. Speciation of arsenic in rice and estimation of daily intake of different arsenic species by Brazilians through rice consumption.

    Science.gov (United States)

    Batista, Bruno L; Souza, Juliana M O; De Souza, Samuel S; Barbosa, Fernando

    2011-07-15

    Rice is an important source of essential elements. However, rice may also contain toxic elements such as arsenic. Therefore, in the present study, the concentration of total arsenic and five main chemical species of arsenic (As(3+), As(5+), DMA, MMA and AsB) were evaluated in 44 different rice samples (white, parboiled white, brown, parboiled brown, parboiled organic and organic white) from different Brazilian regions using high-performance liquid chromatography hyphenated to inductively coupled plasma mass spectrometry (HPLC-ICP-MS). The mean level of total arsenic was 222.8 ng g(-1) and the daily intake of inorganic arsenic (the most toxic form) from rice consumption was estimated as 10% of the Provisional Tolerable Daily Intake (PTDI) with a daily ingestion of 88 g of rice. Inorganic arsenic (As(3+), As(5+)) and dimethylarsinic acid (DMA) are the predominant forms in all samples. The percentages of species were 38.7; 39.7; 3.7 and 17.8% for DMA, As(3+), MMA and As(5+), respectively. Moreover, rice samples harvested in the state of Rio Grande do Sul presented more fractions of inorganic arsenic than rice in Minas Gerais or Goiás, which could lead to different risks of arsenic exposure. Copyright © 2011 Elsevier B.V. All rights reserved.

  19. Estimating the effect of urease inhibitor on rice yield based on NDVI at key growth stages

    Directory of Open Access Journals (Sweden)

    Kailou LIU,Yazhen LI,Huiwen HU

    2014-06-01

    Full Text Available The effect of the urease inhibitor, N-(n-butyl thiophosphoric triamide (NBPT at a range of application rates on rice production was examined in a field experiment at Jinxian County, Jiangxi Province, China. The normalized difference vegetation index (NDVI was measured at key growth stages in both early and late rice. The results showed that the grain yield increased significantly when urea was applied with NBPT, with the highest yield observed at 1.00% NBPT (wt/wt. NDVI differed with the growth stage of rice; it remained steady from the heading to the filling stage. Rice yield could be predicted from the NDVI taken at key rice growing stages, with R2 ranging from 0.34 to 0.69 in early rice and 0.49 to 0.70 in late rice. The validation test showed that RMSE (t·hm-2 values were 0.77 and 0.87 in early and late rice, respectively. Therefore, it was feasible to estimate rice yield for different amounts of urease inhibitor using NDVI.

  20. Can Rice (Oryza sativa) Mitigate Pesticides and Nutrients in Agricultural Runoff?

    Science.gov (United States)

    Moore, M T; Locke, M A

    2018-01-01

    Phytoremediation of nutrients and pesticides in runoff is a growing conservation effort, particularly in agriculturally intensive areas such as the lower Mississippi River Valley. In the current study, rice (Oryza sativa) was examined for its mitigation capacity of nitrogen, phosphorus, diazinon, and permethrin. Twenty-two high density polyethylene circular containers (56 cm x 45 cm) were used as mesocosms, with 12 mesocosms planted with rice and 10 mesocosms remaining unvegetated. Mesocosms were hydraulically connected and arranged in a series of two, with each system providing a 4 h hydraulic retention time (HRT) for a total system retention time of 8 h. Two treatments (RICE/RICE and RICE/BARE) of four replicates each were utilized, with three replicates of controls (BARE/BARE). Systems with RICE/RICE (8 h HRT) significantly reduced diazinon (p = 0.0126), cis-permethrin (p = 0.0442), filtered orthophosphate (p = 0.0058), and total orthophosphate (p = 0.0123) compared to control systems. No significant differences were noted for trans-permethrin, nitrate, or ammonium. Results indicate promise in phytoremediation of agricultural runoff by rice. If further studies reveal contaminants are not transferred into seeds, then rice could potentially serve as both a remediation tool and food source in countries facing agricultural pollution challenges.

  1. A comparison of spider communities in Bt and non-Bt rice fields.

    Science.gov (United States)

    Lee, Sue Yeon; Kim, Seung Tae; Jung, Jong Kook; Lee, Joon-Ho

    2014-06-01

    To assess the potential adverse effects of a Bt rice line (Japonica rice cultivar, Nakdong) expressing a synthetic cry1Ac1 gene, C7-1-9-1-B, which was highly active against all larval stages of Cnaphalocrocis medinalis (Guenée) (Lepidoptera: Crambidae), we investigated the community structure of spiders in Bt and non-Bt rice fields during the rice-growing season in 2007 and 2008 in Chungcheongnam-do, Korea. Spiders were surveyed with a sweep net and suction device. Suction sampling captured more spiders, measured in terms of species level and abundance, than sweeping. Araneidae and Thomisidae were captured more by sweeping, and certain species were captured only by sweeping. These findings show that both suction and sweep sampling methods should be used because these methods are most likely complementary. In total, 29 species in 23 genera and nine families were identified from the 4,937 spiders collected, and both Bt and non-Bt rice fields showed a typical Korean spider assemblage. The temporal patterns of spider species richness and spider abundance were very similar between Bt and non-Bt rice, although significant differences in species richness were observed on a few occasions. Overall, spider community structure, including diversity, the dominant species, and abundance did not differ between Bt and non-Bt rice. The results of the study indicated that the transgenic Cry1Ac rice lines tested in this study had no adverse effects on the spider community structure of the rice fields.

  2. Utilization of wastewater on seed germination and physioogical parameters of rice (Oryza sativa L.)

    Science.gov (United States)

    Huy, V.; Iwai, C. B.

    2018-03-01

    Due to increasing world population and demand, fresh water availability is becoming a limited resource. Reusing wastewater for agriculture has received attention since it contains nutrients, which are beneficial for growing crops. Even though wastewater can be used as the nutrient source for the plant, the toxicity of wastewater can still be a cause for concern and investigation. The main objective of this paper was to assess the effect of different sources of wastewater on the germination of Jasmine rice (KDML105), White rice (Phatum Thani 1), and Sticky rice (RD6) under laboratory conditions. Petri dish cultures were used with various concentrations (0, 50, and 100%) of wastewater collected from swine farm, aquaculture activity, and domestic. Seed germination, root length, shoot length, seed vigor index, fresh weight and dry weight were measured after each experiment. The results have shown that domestic wastewater and aquaculture activity wastewater did not decrease performance of Jasmine rice (KDML105), White rice (Phatum thani 1), and Sticky rice (RD6) while the germination of Jasmine rice (KDML105), White rice (Phatum thani 1), and Sticky rice (RD6) decreased when irrigated with swine farm wastewater. Therefore, using domestic and aquaculture activity wastewater for irrigation are suitable for growth of these crop.

  3. How to Grow Old

    Institute of Scientific and Technical Information of China (English)

    Bertrand Russell

    2008-01-01

    <正>1. In spite of the title, this article will really be on how not to grow old, which, at my time of life, is a much more important subject. My first advice would be to choose your ancestors carefully. Although both my parents died young, I have done well in this respect as regards my other ancestors. My maternal grandfather, it is true, was cut off in the flower of his youth at the age of sixty-seven,

  4. Role of sulphur in rice production

    International Nuclear Information System (INIS)

    Sachdev, Pamila; Sachdev, M.S.

    2002-01-01

    Sulphur is an essential plant nutrient growing in international importance. Rice farmers usually apply nitrogen, phosphorus and potassium at high rates to the crop. Whenever there is an imbalance between off take and input of nutrients, it may lead to a decline in soil fertility and increase incidence of deficiencies of certain plant nutrients especially sulphur and zinc. On the basis of available information, nutritional requirement, uptake values, crop response and measures to overcome S deficiency are some of the aspects critically dealt with

  5. Implications of Water Use and Water Scarcity Footprint for Sustainable Rice Cultivation

    Directory of Open Access Journals (Sweden)

    Thapat Silalertruksa

    2017-12-01

    Full Text Available Rice cultivation is a vital economic sector of many countries in Asia, including Thailand, with the well-being of people relying significantly on selling rice commodities. Water-intensive rice cultivation is facing the challenge of water scarcity. The study assessed the volumetric freshwater use and water scarcity footprint of the major and second rice cultivation systems in the Chao Phraya, Tha Chin, Mun, and Chi watersheds of Thailand. The results revealed that a wide range of freshwater use, i.e., 0.9–3.0 m3/kg of major rice and 0.9–2.3 m3/kg of second rice, and a high water use of rice was found among the watersheds in the northeastern region, like the Mun and Chi watersheds. However, the water scarcity footprint results showed that the second rice cultivation in watersheds, like in Chao Phraya and Tha Chin in the central region, need to be focused for improving the irrigation water use efficiency. The alternate wetting and drying (AWD method was found to be a promising approach for substituting the pre-germinated seed broadcasting system to enhance the water use efficiency of second rice cultivation in the central region. Recommendations vis-à-vis the use of the water stress index as a tool for agricultural zoning policy were also discussed.

  6. Genetic Diversity of Aromatic Rice Germplasm Revealed By SSR Markers

    Directory of Open Access Journals (Sweden)

    Saba Jasim Aljumaili

    2018-01-01

    Full Text Available Aromatic rice cultivars constitute a small but special group of rice and are considered the best in terms of quality and aroma. Aroma is one of the most significant quality traits of rice, and variety with aroma has a higher price in the market. This research was carried out to study the genetic diversity among the 50 aromatic rice accessions from three regions (Peninsular Malaysia, Sabah, and Sarawak with 3 released varieties as a control using the 32 simple sequence repeat (SSR markers. The objectives of this research were to quantify the genetic divergence of aromatic rice accessions using SSR markers and to identify the potential accessions for introgression into the existing rice breeding program. Genetic diversity index among the three populations such as Shannon information index (I ranged from 0.25 in control to 0.98 in Sabah population. The mean numbers of effective alleles and Shannon’s information index were 0.36 and 64.90%, respectively. Similarly, the allelic diversity was very high with mean expected heterozygosity (He of 0.60 and mean Nei’s gene diversity index of 0.36. The dendrogram based on UPGMA and Nei’s genetic distance classified the 53 rice accessions into 10 clusters. Analysis of molecular variance (AMOVA revealed that 89% of the total variation observed in this germplasm came from within the populations, while 11% of the variation emanated among the populations. These results reflect the high genetic differentiation existing in this aromatic rice germplasm. Using all these criteria and indices, seven accessions (Acc9993, Acc6288, Acc6893, Acc7580, Acc6009, Acc9956, and Acc11816 from three populations have been identified and selected for further evaluation before introgression into the existing breeding program and for future aromatic rice varietal development.

  7. Genetic Diversity of Aromatic Rice Germplasm Revealed By SSR Markers.

    Science.gov (United States)

    Jasim Aljumaili, Saba; Rafii, M Y; Latif, M A; Sakimin, Siti Zaharah; Arolu, Ibrahim Wasiu; Miah, Gous

    2018-01-01

    Aromatic rice cultivars constitute a small but special group of rice and are considered the best in terms of quality and aroma. Aroma is one of the most significant quality traits of rice, and variety with aroma has a higher price in the market. This research was carried out to study the genetic diversity among the 50 aromatic rice accessions from three regions (Peninsular Malaysia, Sabah, and Sarawak) with 3 released varieties as a control using the 32 simple sequence repeat (SSR) markers. The objectives of this research were to quantify the genetic divergence of aromatic rice accessions using SSR markers and to identify the potential accessions for introgression into the existing rice breeding program. Genetic diversity index among the three populations such as Shannon information index ( I ) ranged from 0.25 in control to 0.98 in Sabah population. The mean numbers of effective alleles and Shannon's information index were 0.36 and 64.90%, respectively. Similarly, the allelic diversity was very high with mean expected heterozygosity ( H e ) of 0.60 and mean Nei's gene diversity index of 0.36. The dendrogram based on UPGMA and Nei's genetic distance classified the 53 rice accessions into 10 clusters. Analysis of molecular variance (AMOVA) revealed that 89% of the total variation observed in this germplasm came from within the populations, while 11% of the variation emanated among the populations. These results reflect the high genetic differentiation existing in this aromatic rice germplasm. Using all these criteria and indices, seven accessions (Acc9993, Acc6288, Acc6893, Acc7580, Acc6009, Acc9956, and Acc11816) from three populations have been identified and selected for further evaluation before introgression into the existing breeding program and for future aromatic rice varietal development.

  8. Genetic Diversity of Aromatic Rice Germplasm Revealed By SSR Markers

    Science.gov (United States)

    Jasim Aljumaili, Saba; Sakimin, Siti Zaharah; Arolu, Ibrahim Wasiu; Miah, Gous

    2018-01-01

    Aromatic rice cultivars constitute a small but special group of rice and are considered the best in terms of quality and aroma. Aroma is one of the most significant quality traits of rice, and variety with aroma has a higher price in the market. This research was carried out to study the genetic diversity among the 50 aromatic rice accessions from three regions (Peninsular Malaysia, Sabah, and Sarawak) with 3 released varieties as a control using the 32 simple sequence repeat (SSR) markers. The objectives of this research were to quantify the genetic divergence of aromatic rice accessions using SSR markers and to identify the potential accessions for introgression into the existing rice breeding program. Genetic diversity index among the three populations such as Shannon information index (I) ranged from 0.25 in control to 0.98 in Sabah population. The mean numbers of effective alleles and Shannon's information index were 0.36 and 64.90%, respectively. Similarly, the allelic diversity was very high with mean expected heterozygosity (He) of 0.60 and mean Nei's gene diversity index of 0.36. The dendrogram based on UPGMA and Nei's genetic distance classified the 53 rice accessions into 10 clusters. Analysis of molecular variance (AMOVA) revealed that 89% of the total variation observed in this germplasm came from within the populations, while 11% of the variation emanated among the populations. These results reflect the high genetic differentiation existing in this aromatic rice germplasm. Using all these criteria and indices, seven accessions (Acc9993, Acc6288, Acc6893, Acc7580, Acc6009, Acc9956, and Acc11816) from three populations have been identified and selected for further evaluation before introgression into the existing breeding program and for future aromatic rice varietal development. PMID:29736396

  9. Application of gamma-ray irradiation technique to select, create and develop super rice with high quality to substitute the imported hybrid rice

    International Nuclear Information System (INIS)

    Tran Duy Quy; Tran Duy Vuong; Tran Duy Duong; Bui Huy Thuc

    2015-01-01

    Three varieties NPT3, BQ and TQ14 were selected by irradiation ray source Gamma Co-60 with dry seed, 13% grain moisture and created at 25-30 krad. NPT3 is super rice varieties with characteristics such as: extremely short growing period (105-110 day crop; 130- 135 days in the spring, the average yield of 9-10 tones/ha), quality, stem, leaf stand, suitable for intensive capability, able to resist pests and unfavorable conditions especially the elements of productivity (amylase from 15-16%) and mass produced including hybrid rice as Nhi Uu 868, Thien Nguyen Uu 9, HYT100, etc. BQ rice varieties were high quality, average productivity gain of 7.5- 8.0 ton/ha, equivalent to hybrid rice, short growth period (105-110 days in summer season; 120- 130 days in spring season), and quality rice: content 18-20% amylose, rice delicious, supple as BC15. TQ14 varieties was planted in 2 seasons/ year, with agricultural and biological characteristics as Khang-Dan18 mutant with wide adaptation, high yield potential, the average gain from 5.9 to 6.2 tones/ha, short growth period (105-110 days in summer season, 130-135 days in spring season), insect resistance, quality of rice suitable for manufacturing technology like noodles, instant noodles, rice noodles, Ethanol. (author)

  10. Toxicity of essential oils from leaves of Piperaceae species in rice stalk stink bug eggs, Tibraca limbativentris (Hemiptera: Pentatomidae

    Directory of Open Access Journals (Sweden)

    Diones Krinski

    Full Text Available ABSTRACT Tibraca limbativentris to is an important rice pest and occurs in all rice-growing regions of Latin America. The control this insect is accomplished with synthetic chemical insecticides, however, new approaches are needed to reduce risks to the environment, to the natural enemies and also to avoid the onset of insecticides resistance. This study was designed to assess the toxicity of essential oils (EOs from leaves of Piper aduncum, P. gaudichaudianum, P. malacophyllum, P. marginatum and P. tuberculatum (Piperaceae on rice stalk stink bug eggs, T. limbativentris. Essential oils were extracted with steam distillation and dilutions were made for bioassays at concentrations of 0.25; 0.5; 1.0; 2.0 and 4.0%. Essential oils from all species of Piperaceae displayed ovicidal activity. The LC50 values indicated that both younger and older eggs were susceptible to these oils. Ovicidal activity is related to the potential toxicity of several compounds, especially dilapiolle, myristicin, cubebene, α-guaiene, longifolene, prezizane, spathulenol, sabinene and δ-2-carene. Thus, EOs tested showed promising results for use as biorational botanical insecticides.

  11. Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change.

    Directory of Open Access Journals (Sweden)

    Regina S Redman

    Full Text Available Climate change and catastrophic events have contributed to rice shortages in several regions due to decreased water availability and soil salinization. Although not adapted to salt or drought stress, two commercial rice varieties achieved tolerance to these stresses by colonizing them with Class 2 fungal endophytes isolated from plants growing across moisture and salinity gradients.Plant growth and development, water usage, ROS sensitivity and osmolytes were measured with and without stress under controlled conditions.The endophytes conferred salt, drought and cold tolerance to growth chamber and greenhouse grown plants. Endophytes reduced water consumption by 20-30% and increased growth rate, reproductive yield, and biomass of greenhouse grown plants. In the absence of stress, there was no apparent cost of the endophytes to plants, however, endophyte colonization decreased from 100% at planting to 65% compared to greenhouse plants grown under continual stress (maintained 100% colonization.These findings indicate that rice plants can exhibit enhanced stress tolerance via symbiosis with Class 2 endophytes, and suggest that symbiotic technology may be useful in mitigating impacts of climate change on other crops and expanding agricultural production onto marginal lands.

  12. Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change.

    Science.gov (United States)

    Redman, Regina S; Kim, Yong Ok; Woodward, Claire J D A; Greer, Chris; Espino, Luis; Doty, Sharon L; Rodriguez, Rusty J

    2011-01-01

    Climate change and catastrophic events have contributed to rice shortages in several regions due to decreased water availability and soil salinization. Although not adapted to salt or drought stress, two commercial rice varieties achieved tolerance to these stresses by colonizing them with Class 2 fungal endophytes isolated from plants growing across moisture and salinity gradients.Plant growth and development, water usage, ROS sensitivity and osmolytes were measured with and without stress under controlled conditions.The endophytes conferred salt, drought and cold tolerance to growth chamber and greenhouse grown plants. Endophytes reduced water consumption by 20-30% and increased growth rate, reproductive yield, and biomass of greenhouse grown plants. In the absence of stress, there was no apparent cost of the endophytes to plants, however, endophyte colonization decreased from 100% at planting to 65% compared to greenhouse plants grown under continual stress (maintained 100% colonization).These findings indicate that rice plants can exhibit enhanced stress tolerance via symbiosis with Class 2 endophytes, and suggest that symbiotic technology may be useful in mitigating impacts of climate change on other crops and expanding agricultural production onto marginal lands.

  13. Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: A strategy for mitigating impacts of climate change

    Science.gov (United States)

    Redman, R.S.; Kim, Y.-O.; Woodward, C.J.D.A.; Greer, C.; Espino, L.; Doty, S.L.; Rodriguez, R.J.

    2011-01-01

    Climate change and catastrophic events have contributed to rice shortages in several regions due to decreased water availability and soil salinization. Although not adapted to salt or drought stress, two commercial rice varieties achieved tolerance to these stresses by colonizing them with Class 2 fungal endophytes isolated from plants growing across moisture and salinity gradients. Plant growth and development, water usage, ROS sensitivity and osmolytes were measured with and without stress under controlled conditions. The endophytes conferred salt, drought and cold tolerance to growth chamber and greenhouse grown plants. Endophytes reduced water consumption by 20–30% and increased growth rate, reproductive yield, and biomass of greenhouse grown plants. In the absence of stress, there was no apparent cost of the endophytes to plants, however, endophyte colonization decreased from 100% at planting to 65% compared to greenhouse plants grown under continual stress (maintained 100% colonization). These findings indicate that rice plants can exhibit enhanced stress tolerance via symbiosis with Class 2 endophytes, and suggest that symbiotic technology may be useful in mitigating impacts of climate change on other crops and expanding agricultural production onto marginal lands.

  14. Diseases of wild rice

    Science.gov (United States)

    Diseases are much more pronounced in cultivated wild rice than in natural stands, most likely due to the narrower genetic base of the populations, plant stress due to high planting density and floodwater removal prior to harvest, and high relative humidity in the plant canopy. Yield losses occur as ...

  15. Promising rice mutants

    International Nuclear Information System (INIS)

    Hakim, L.; Azam, M.A.; Miah, A.J.; Mansur, M.A.; Akanda, H.R.

    1988-01-01

    Two induced mutants namely, Mut NS 1 (tall) and Mut NS 5 (semi-dwarf) derived from rice variety Nizersail were evaluated for various agronomic characters at four locations in Bangladesh. Both the mutants matured about three weeks earlier and yielded significantly higher than the parent variety Nizersail. (author). 3 tabs., 9 refs

  16. Investigating differences in light stable isotopes between Thai jasmine rice and Sungyod rice

    Science.gov (United States)

    Kukusamude, C.; Kongsri, S.

    2017-10-01

    We report the differences in light stable isotopes between two kinds of Thai rice (Thai jasmine and Sungyod rice). Thai jasmine rice and Sungyod rice were cultivated in the northeast and the south of Thailand. Light isotopes including 13C, 15N and 18O of Thai jasmine rice and Sungyod rice samples were carried out using isotope ratio mass spectrometry (IRMS). Thai jasmine rice (Khao Dawk Mali 105) was cultivated from Thung Kula Rong Hai area, whereas Sungyod rice was cultivated from Phathalung province. Hypothesis testing of difference of each isotope between Thai jasmine rice and Sungyod rice was also studied. The study was the feasibility test whether the light stable isotopes can be the variables to identify Thai jasmine rice and Sungyod rice. The result shows that there was difference in the isotope patterns of Thai jasmine rice and Sungyod rice. Our results may provide the useful information in term of stable isotope profiles of Thai rice.

  17. CROP SPECIES RECOGNITION AND DISCRIMINATION PADDY-RICE-GROWINGFIELDS FROM REAPED-FIELDS BY THE RADAR VEGETATION INDEX (RVI OF ALOS-2/PALSAR2

    Directory of Open Access Journals (Sweden)

    Y. Yamada

    2016-06-01

    Full Text Available The Japanese ALOS-2 satellite was launched on May 24th, 2014. It has the L-band SAR, PALSAR-2. Kim,Y. and van Zyl, J.J. proposed a kind of Radar Vegetation Index (RVI as RVI = 8 * σ0hv / (σ0hh + σ0vv + 2* σ0hv by L-band full-polarimetric radar data. Kim, Y. and Jackson, T.J., et al. applied the equation into rice and soybean by multi-frequency polarimetric scatterometer above 4.16 meters from the ground. Their report showed the L-band was the most promising wave length for estimating LAI and NDVI from RVI. The author tried to apply the analysis to the actual paddy field areas, both Inashiki region and Miyagi region in the eastern main island, “Honshu”, areas of Japan by ALOS-2/PALSAR-2 full-polarimetry data in the summer season, the main crop growing time, of 2015. Judging from conventional methods, it will be possible to discriminate paddy rice growing fields from reaped fields or the other crops growing fields by the PALSAR-2 data. But the RVI value is vaguely related to such land use or biomass at the present preliminary experiment. The continuous research by the additional PALSAR-2 full-polarimetry data should be desired.

  18. Evaluation of real-time PCR detection methods for detecting rice products contaminated by rice genetically modified with a CpTI-KDEL-T-nos transgenic construct.

    Science.gov (United States)

    Nakamura, Kosuke; Akiyama, Hiroshi; Kawano, Noriaki; Kobayashi, Tomoko; Yoshimatsu, Kayo; Mano, Junichi; Kitta, Kazumi; Ohmori, Kiyomi; Noguchi, Akio; Kondo, Kazunari; Teshima, Reiko

    2013-12-01

    Genetically modified (GM) rice (Oryza sativa) lines, such as insecticidal Kefeng and Kemingdao, have been developed and found unauthorised in processed rice products in many countries. Therefore, qualitative detection methods for the GM rice are required for the GM food regulation. A transgenic construct for expressing cowpea (Vigna unguiculata) trypsin inhibitor (CpTI) was detected in some imported processed rice products contaminated with Kemingdao. The 3' terminal sequence of the identified transgenic construct for expression of CpTI included an endoplasmic reticulum retention signal coding sequence (KDEL) and nopaline synthase terminator (T-nos). The sequence was identical to that in a report on Kefeng. A novel construct-specific real-time polymerase chain reaction (PCR) detection method for detecting the junction region sequence between the CpTI-KDEL and T-nos was developed. The imported processed rice products were evaluated for the contamination of the GM rice using the developed construct-specific real-time PCR methods, and detection frequency was compared with five event-specific detection methods. The construct-specific detection methods detected the GM rice at higher frequency than the event-specific detection methods. Therefore, we propose that the construct-specific detection method is a beneficial tool for screening the contamination of GM rice lines, such as Kefeng, in processed rice products for the GM food regulation. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Radiation disinfestation of Basmati rice

    International Nuclear Information System (INIS)

    Rao, V.S.; Gholap, A.S.; Adhikari, H.R.; Nair, P.M.

    1994-01-01

    Effect of low dose γ-radiation on prepackaged Basmati rice was studied in order to achieve disinfestation of rice. Basmati rice procured from local market was repacked in 1 kg pouches made from high density polyethylene (HDP) and biaxially oriented polypropylene: low density polyethylene (BOPP/LDP) laminate and irradiated at doses from 0.25-1.0 kGy. Within one month of storage at room temperature, unirradiated (control) Basmati rice developed heavy infestation. No infestation was observed in any of the irradiated samples even at 0.25 kGy and the rice could be stored for 6 months in a clean state. Irradiation (at 0.25 kGy) did not alter the moisture content of the rice. Likewise, no significant change was noted due to irradiation in the functional properties of rice such as swelling index and water absorption and in total volatile components responsible for flavour of Basmati rice. In organoleptic evaluation, no significant difference was found between the acceptability of irradiated (0.25 kGy) and control rice. These results are significant in view of the high export potential of Basmati rice and the transit losses at present due to infestation. (author). 24 refs., 5 tabs., 1 fig

  20. Farinha de mandioca enriquecida com bioproteínas (Saccharomyces cerevisiae, em associação ao feijão e arroz, na dieta de ratos em crescimento Cassava flour enriched with yeast (Saccharomyces cerevisiae protein, in association with beans and rice, in the diet of growing rats

    Directory of Open Access Journals (Sweden)

    Anastácia Cavalcanti Metri

    2003-01-01

    Full Text Available Avaliou-se o efeito da mistura de feijão, arroz e farinha de mandioca enriquecida com bioproteína (Saccharomyces cerevisiae, em ratos wistar machos recém-desmamados (n=60, durante 28 dias. Foram utilizadas as seguintes dietas: experimentais (feijão, arroz e farinha de mandioca enriquecida com leveduras; feijão, arroz e farinha de mandioca comum; controle (farinha de mandioca enriquecida com levedura; e padrão (caseína. Determinaram-se os testes biológicos. Os orgãos foram removidos para análise de pesos úmido e seco (rim esquerdo, baço e amostras do fígado e cérebro, teor de proteína (fígado e cérebro e histopatologia (fígado, coração e rim direito. Foram ainda quantificados os lipídios totais da carcaça dos animais. Os dados foram estatisticamente avaliados pelo teste Não Paramétrico de Kruskal-Wallis e pelo teste de Comparações Múltiplas (pThe effect of a mixture of beans, rice and cassava flour enriched with yeast (Saccharomyces cerevisiae protein was assessed in weanling male Wistar rats (n=60, during 28 days. The following diets were used: experimental (beans, rice and manioc flour with yeast protein; beans, rice and cassava flour without yeast protein; control (cassava flour with yeast protein; and standard (casein. The biological test were determined. The organs were removed for evaluation of wet and dry weights (left kidney, spleen and liver and brain samples, protein levels (liver and brain, and histopathology (heart, right kidney and liver. Carcass total lipids were also recorded. Results were statistically analyzed by the Nonparametric Test of Kruskal-Wallis and the Test of Multiple Comparisons (p<0.05. The highest values for all investigated parameters were found in the casein-fed group, followed by the experimental groups. Data suggest that flour enriched with yeast protein can be recommended as a dietary supplement to eradicate the nutritional deficiency in the poor population.

  1. Comparative physical mapping between wheat chromosome arm 2BL and rice chromosome 4.

    Science.gov (United States)

    Lee, Tong Geon; Lee, Yong Jin; Kim, Dae Yeon; Seo, Yong Weon

    2010-12-01

    Physical maps of chromosomes provide a framework for organizing and integrating diverse genetic information. DNA microarrays are a valuable technique for physical mapping and can also be used to facilitate the discovery of single feature polymorphisms (SFPs). Wheat chromosome arm 2BL was physically mapped using a Wheat Genome Array onto near-isogenic lines (NILs) with the aid of wheat-rice synteny and mapped wheat EST information. Using high variance probe set (HVP) analysis, 314 HVPs constituting genes present on 2BL were identified. The 314 HVPs were grouped into 3 categories: HVPs that match only rice chromosome 4 (298 HVPs), those that match only wheat ESTs mapped on 2BL (1), and those that match both rice chromosome 4 and wheat ESTs mapped on 2BL (15). All HVPs were converted into gene sets, which represented either unique rice gene models or mapped wheat ESTs that matched identified HVPs. Comparative physical maps were constructed for 16 wheat gene sets and 271 rice gene sets. Of the 271 rice gene sets, 257 were mapped to the 18-35 Mb regions on rice chromosome 4. Based on HVP analysis and sequence similarity between the gene models in the rice chromosomes and mapped wheat ESTs, the outermost rice gene model that limits the translocation breakpoint to orthologous regions was identified.

  2. Application of two-stream model to solar radiation of rice canopy

    International Nuclear Information System (INIS)

    Kawakata, T.

    2005-01-01

    The amount of solar radiation absorbed by a crop canopy is correlated with crop production, and thus it is necessary to estimate both transmission and reflection around the canopy for crop growth models. The 'forward and backward streams' representation of radiation has been refined to account for both transmission and reflection in the crop canopy. However, this model has not been applied to a rice canopy through the growing period. The purpose of this study is to examine whether the two-stream model is applicable to the rice canopy, and to investigate the parameters of the model. The values for both transmittance below the rice canopy and reflectance above it that were derived from the two-stream model represent the observed values throughout the growing period. The inclination factor of leaves (F), which is used in the two-stream model, was almost equivalent to the extinction coefficient of transmittance in the case of the rice canopy

  3. Selectivity and weed control efficacy of some herbicides applied to sprinkler irrigated rice (Oryza sativa L.)

    Energy Technology Data Exchange (ETDEWEB)

    Cavero, J; Zaragoza, C; Cirujeda, A; Anzalone, A; Faci, J M; Blanco, O

    2011-07-01

    Sprinkler irrigation can reduce the irrigation water needed to grow rice. However, most available information on weed control with herbicides is related to flood irrigated rice because this is the main growing method. Field experiments were conducted at Zaragoza (Spain) during two years to study weed control and tolerance of sprinkler irrigated rice to several herbicides. The main weeds were Atriplex prostrata Boucher ex DC., Cyperus rotundus L., Echinochloa crus-galli (L.) Beauv. and Sonchus oleraceus L. Rice cv Guadiamar was tolerant to preemergence (PRE) application of clomazone at 0.36 kg ha{sup -}1 and oxadiazon at 0.5 kg ha{sup -}1. PRE application of pendimethalin at 1.32 kg ha{sup -}1 combined with clomazone at 0.36 kg ha{sup -}1 decreased rice yield. Postemergence (POST) application of bentazon at 1.6 kg ha{sup -}1 + MCPA at 0.25 kg ha{sup -}1 did not injure rice but POST application of azimsulfuron at 0.025 kg ha{sup -}1 produced visual crop injury. Only treatments that controlled grassy weeds since rice was planted and by more than 80% at harvest time lead to acceptable rice yield (> 5,000 kg ha{sup -}1). Clomazone applied PRE at 0.36 kg ha{sup -}1 provided good control of grassy weeds (> 80%) and the highest rice yield, so it is recommended as a selective and efficacious PRE treatment for weed control of annual weeds in sprinkler irrigated rice. The perennial purple nutsedge was difficult to control at high plant densities (> 150 plants m{sup -}2) and the recommended herbicide is azimsulfuron applied at POST at 0.02 kg ha{sup -}1. (Author) 37 refs.

  4. Mosquitoes of the rice agroecosystem of Malaysia: species composition and their abundance in relation to rice farming

    International Nuclear Information System (INIS)

    Abu Hassan Ahmad; Che Salmah Md Rawi

    2002-01-01

    Mosquito abundance in relation to rice farming was studied in the Muda and the Kerian Irrigation Schemes. Mosquito larvae were collected using dippers for several growing seasons. Adult mosquitoes were collected by using human bait and cow bait and net trap at nights. Culex, Mansonia and Anopheles were the three genera of mosquito found in the rice agroecosystem. Four species of Mansonia were found biting on human bait. Culex mosquitoes were caught biting on human and cow baits. Culex tritaeniorhynchus, C pseudovishnui, C vishnui, C gelidus and C bitaeniorhynchus were the most common Culex mosquitoes found. Anoheles sinensis and A. peditaeniatus were the most dominant panopheline mosquitoes. High abundance of larvae and adult mosquitoes were observed during ploughing, planting, and tillering stages of rice farming. (Author)

  5. Creating rigorous pathways to monetize methane and nitrous oxide emission reductions at small scale rice farms in three states of semi-arid peninsular India

    Science.gov (United States)

    Kritee, K.; Tiwari, R.; Nair, D.; Adhya, T. K.; Rudek, J.

    2014-12-01

    As a part of a joint undertaking by Environmental Defense Fund and the Fair Climate Network, we have measured reduction in methane and nitrous oxide emissions due to alternate "low carbon" rice cultivation practices for three ago-ecological zones in India for the past two years. Sampling for nitrous oxide and methane emissions was done on approximately 60-80% of the total number of days in a growing season and was based on modified GRACEnet protocol. In recognition of farmer's economic interest and global food security demands, we also measured the effect of rice cultivation practices on farm economics and yields. Our data from three agro-ecological zones for 2012-2014 suggest that, for semi-arid peninsular India, low-carbon rice cultivation practices offer large range of emission reduction potential (0.5-5 metric tons CO2e/acre/year). The regions with sandy soils (Alfisols) had high rates of nitrous oxide emissions even under baseline "flooded" rice cultivation regimes and, thus, the Tier 1 IPCC emissions factors grossly underestimate both the amount of nitrous oxide emission from conventional rice cultivation practices, and the extent to which it can be reduced through better fertilizer management. Also, the IPCC factors overestimate the methane emission reduction possible due to water management for rice paddies. Therefore, it is crucial to customize N and water management to each region such that yields and net GHG emission reduction are maximized. These practices also have the potential to decrease water use by 10-30% and improve long term soil health by optimizing organic matter and increasing water-holding capacity. In addition, through GPS based demarcation of farmer plots, recording baseline practices through extensive surveys, documenting the parameters required to aggregate and prove implementation of low carbon rice farming practices, and to model the GHG emission reduction over large scales, we have put forward a path for better monetization of GHG

  6. Growing a market economy

    Energy Technology Data Exchange (ETDEWEB)

    Basu, N.; Pryor, R.J.

    1997-09-01

    This report presents a microsimulation model of a transition economy. Transition is defined as the process of moving from a state-enterprise economy to a market economy. The emphasis is on growing a market economy starting from basic microprinciples. The model described in this report extends and modifies the capabilities of Aspen, a new agent-based model that is being developed at Sandia National Laboratories on a massively parallel Paragon computer. Aspen is significantly different from traditional models of the economy. Aspen`s emphasis on disequilibrium growth paths, its analysis based on evolution and emergent behavior rather than on a mechanistic view of society, and its use of learning algorithms to simulate the behavior of some agents rather than an assumption of perfect rationality make this model well-suited for analyzing economic variables of interest from transition economies. Preliminary results from several runs of the model are included.

  7. The growing fibroadenoma

    International Nuclear Information System (INIS)

    Sanders, Linda M; Sara, Rana

    2015-01-01

    Fibroadenomas (FAs) are the most common tumors of the breast clinically and pathologically in adolescent and young women but may be discovered at any age. With increasing use of core biopsy rather than excision for diagnosis, it is now commonplace to follow these lesions with imaging. To assess the incidence of epithelial abnormalities (atypia, in situ or invasive, ductal or lobular malignancies) in FAs diagnosed by core biopsy and to re-evaluate the management paradigm for any growing FA. A retrospective review of the senior author’s pathology results over 19 years identified 2062 nodular FAs (biopsied by ultrasound or stereotactic guidance). Eighty-three core biopsied FAs were identified which subsequently enlarged. Twelve of 2062 of core biopsied nodules demonstrated atypia, in situ, or invasive malignancy (ductal or lobular) within or adjacent to the FA (0.58%). Eighty-three FAs enlarged and underwent either surgical excision (n = 65), repeat core biopsy (n = 9), or imaging follow-up (n = 9). The incidence of atypia, in situ or invasive malignancy was 0/83 (0%). Two enlarging FAs were subsequently surgically diagnosed as benign phyllodes tumors (PT). Malignancy in or adjacent to a core biopsied FA is rare. The risk of cancer in a growing FA is even rarer; none were present in our series. FAs with abnormal epithelial abnormalities require excision. Otherwise, FAs without epithelial abnormality diagnosed by core biopsy need no specific follow-up considering the negligible incidence of conversion to malignancy. The breast interventionalist must know how to manage discordant pathology results

  8. Biochar amendment reduced methylmercury accumulation in rice plants

    Energy Technology Data Exchange (ETDEWEB)

    Shu, Rui; Wang, Yongjie [School of Environment, Nanjing University, State Key Laboratory of Pollution Control and Resource Reuse, Nanjing, Jiangsu Province, People’s Republic of China (China); Zhong, Huan, E-mail: zhonghuan@nju.edu.cn [School of Environment, Nanjing University, State Key Laboratory of Pollution Control and Resource Reuse, Nanjing, Jiangsu Province, People’s Republic of China (China); Environmental and Life Sciences Program (EnLS), Trent University, Peterborough, Ontario (Canada)

    2016-08-05

    Highlights: • Biochar amendment could evidently reduce methylmercury (MeHg) levels in rice grain. • Biochar could enhance microbial production of MeHg, probably by providing sulfate. • Biochar could immobilize MeHg in soil, and reduce MeHg availability to rice plants. • Biochar amendment increased grain biomass, leading to biodilution of MeHg in grain. - Abstract: There is growing concern about methylmercury (MeHg) accumulation in rice grains and thus enhanced dietary exposure to MeHg in Asian countries. Here, we explored the possibility of reducing grain MeHg levels by biochar amendment, and the underlying mechanisms. Pot (i.e., rice cultivation in biochar amended soils) and batch experiments (i.e., incubation of amended soils under laboratory conditions) were carried out, to investigate MeHg dynamics (i.e., MeHg production, partitioning and phytoavailability in paddy soils, and MeHg uptake by rice) under biochar amendment (1–4% of soil mass). We demonstrate for the first time that biochar amendment could evidently reduce grain MeHg levels (49–92%). The declines could be attributed to the combined effects of: (1) increased soil MeHg concentrations, probably explained by the release of sulfate from biochar and thus enhanced microbial production of MeHg (e.g., by sulfate-reducing bacteria), (2) MeHg immobilization in soils, facilitated by the large surface areas and high organosulfur content of biochar, and (3) biodilution of MeHg in rice grains, due to the increased grain biomass under biochar amendment (35–79%). These observations together with mechanistic explanations improve understanding of MeHg dynamics in soil-rice systems, and support the possibility of reducing MeHg phytoaccumulation under biochar amendment.

  9. Biochar amendment reduced methylmercury accumulation in rice plants

    International Nuclear Information System (INIS)

    Shu, Rui; Wang, Yongjie; Zhong, Huan

    2016-01-01

    Highlights: • Biochar amendment could evidently reduce methylmercury (MeHg) levels in rice grain. • Biochar could enhance microbial production of MeHg, probably by providing sulfate. • Biochar could immobilize MeHg in soil, and reduce MeHg availability to rice plants. • Biochar amendment increased grain biomass, leading to biodilution of MeHg in grain. - Abstract: There is growing concern about methylmercury (MeHg) accumulation in rice grains and thus enhanced dietary exposure to MeHg in Asian countries. Here, we explored the possibility of reducing grain MeHg levels by biochar amendment, and the underlying mechanisms. Pot (i.e., rice cultivation in biochar amended soils) and batch experiments (i.e., incubation of amended soils under laboratory conditions) were carried out, to investigate MeHg dynamics (i.e., MeHg production, partitioning and phytoavailability in paddy soils, and MeHg uptake by rice) under biochar amendment (1–4% of soil mass). We demonstrate for the first time that biochar amendment could evidently reduce grain MeHg levels (49–92%). The declines could be attributed to the combined effects of: (1) increased soil MeHg concentrations, probably explained by the release of sulfate from biochar and thus enhanced microbial production of MeHg (e.g., by sulfate-reducing bacteria), (2) MeHg immobilization in soils, facilitated by the large surface areas and high organosulfur content of biochar, and (3) biodilution of MeHg in rice grains, due to the increased grain biomass under biochar amendment (35–79%). These observations together with mechanistic explanations improve understanding of MeHg dynamics in soil-rice systems, and support the possibility of reducing MeHg phytoaccumulation under biochar amendment.

  10. Study of Rice Marketing System in Iran

    OpenAIRE

    Feizabadi, Yaser

    2011-01-01

    Rice comes second after wheat in Iran`s food consumption economy. Rising population and recent growth in GDP has made Iran one of the greatest rice importer countries all over the world. That is why rice marketing has always been a controversial issue in Iran`s agricultural economics. To study rice marketing system in Iran, this paper aims to calculate rice marketing margin, market efficiency and marketing cost coefficient in seaside Mazandaran province( where 70 percent of domestic rice prod...

  11. Understanding the nature of methane emission from rice ecosystems as basis of mitigation strategies

    Energy Technology Data Exchange (ETDEWEB)

    Buendia, L.V.; Neue, H.U.; Wassmann, R. [International Rice Research Institute, Laguna (Philippines)] [and others

    1996-12-31

    Methane is considered as an important Greenhouse gas and rice fields are one of the major atmospheric methane sources. The paper aims to develop sampling strategies and formulate mitigation options based on diel (day and night) and seasonal pattern of methane emission. The study was conducted in 4 countries to measure methane flux using an automatic closed chamber system. A 24-hour bihourly methane emissions were continuously obtained during the whole growing season. Daily and seasonal pattern of methane fluxes from different rice ecosystems were evaluated. Diel pattern of methane emission from irrigated rice fields, in all sites, displayed similar pattern from planting to flowering. Fluxes at 0600, 1200, and 1800 h were important components of the total diel flux. A proposed sampling frequency to accurately estimate methane emission within the growing season was designed based on the magnitude of daily flux variation. Total methane emission from different ecosystems follow the order: deepwater rice > irrigated rice > rainfed rice. Application of pig manure increased total emission by 10 times of that without manure. Green manure application increased emission by 49% of that applied only with inorganic fertilizer. Removal of floodwater at 10 DAP and 35 DAP, within a period of 4 days, inhibited production and emission of methane. The level of variation in daily methane emission and seasonal emission pattern provides useful information for accurate determination of methane fluxes. Characterization of seasonal emission pattern as to ecologies, fertilizer amendments, and water management gives an idea of where to focus mitigation strategies for sustainable rice production.

  12. Viking Disruptions or Growing Integration?

    DEFF Research Database (Denmark)

    Sindbæk, Søren Michael

    2012-01-01

    Long-distance communication has emerged as a particular focus for archaeological exploration using network theory, analysis, and modelling. Initial attempts to adapt methods from social network analysis to archaeological data have, however, struggled to produce decisive results. This paper...... demonstrates how formal network analysis can be combined with a contextual reading of evidence relating to a long-distance communication network in the past. A study of the combined distributions of ten vessel types in 152 settlement sites from the 10th century suggests the outline of the core structure...... of the network. The model implies that 10th century long-distance exchange in the North Sea region featured long-distance links equal to those of the Carolingian emporia trade, and represented a growth in terms of new axes of integration, above all the growing links between the Scandinavian Peninsula...

  13. Marker-assisted backcrossing: a useful method for rice improvement.

    Science.gov (United States)

    Hasan, Muhammad Mahmudul; Rafii, Mohd Y; Ismail, Mohd R; Mahmood, Maziah; Rahim, Harun A; Alam, Md Amirul; Ashkani, Sadegh; Malek, Md Abdul; Latif, Mohammad Abdul

    2015-03-04

    The world's population is increasing very rapidly, reducing the cultivable land of rice, decreasing table water, emerging new diseases and pests, and the climate changes are major issues that must be addressed to researchers to develop sustainable crop varieties with resistance to biotic and abiotic stresses. However, recent scientific discoveries and advances particularly in genetics, genomics and crop physiology have opened up new opportunities to reduce the impact of these stresses which would have been difficult if not impossible as recently as the turn of the century. Marker assisted backcrossing (MABC) is one of the most promising approaches is the use of molecular markers to identify and select genes controlling resistance to those factors. Regarding this, MABC can contribute to develop resistant or high-yielding or quality rice varieties by incorporating a gene of interest into an elite variety which is already well adapted by the farmers. MABC is newly developed efficient tool by which using large population sizes (400 or more plants) for the backcross F 1 generations, it is possible to recover the recurrent parent genotype using only two or three backcrosses. So far, many high yielding, biotic and abiotic stresses tolerance, quality and fragrance rice varieties have been developed in rice growing countries through MABC within the shortest timeframe. Nowadays, MABC is being used widely in plant breeding programmes to develop new variety/lines especially in rice. This paper reviews recent literature on some examples of variety/ line development using MABC strategy.

  14. Biodiversity Conservation in Rice Paddies in China: Toward Ecological Sustainability

    Directory of Open Access Journals (Sweden)

    Yufeng Luo

    2014-09-01

    Full Text Available Rice paddies are artificial wetlands that supply people with food and provide wildlife with habitats, breeding areas, shelters, feeding grounds and other services, and rice paddies play an important part in agricultural ecological systems. However, modern agricultural practices with large-scale intensive farming have significantly accelerated the homogenization of the paddy field ecosystem. Modern agriculture mostly relies on chemically-driven modern varieties and irrigation to ensure high production, resulting in the deterioration and imbalance of the ecosystem. Consequently, outbreaks of diseases, insects and weeds have become more frequent in paddy fields. This paper describes the current situation of rice paddy biodiversity in China and analyzes the community characteristics of arthropods and weedy plants. Meanwhile, we discuss how biodiversity was affected by modern agriculture changes, which have brought about a mounting crisis threatening to animals and plants once common in rice paddies. Measures should be focused to firstly preventing further deterioration and, then, also, promoting restoration processes. Ecological sustainability can be achieved by restoring paddy field biodiversity through protecting the ecological environment surrounding the paddy fields, improving paddy cropping patterns, growing rice with less agricultural chemicals and chemical fertilizers, constructing paddy systems with animals and plants and promoting ecological education and public awareness.

  15. Biochar amendment reduced methylmercury accumulation in rice plants.

    Science.gov (United States)

    Shu, Rui; Wang, Yongjie; Zhong, Huan

    2016-08-05

    There is growing concern about methylmercury (MeHg) accumulation in rice grains and thus enhanced dietary exposure to MeHg in Asian countries. Here, we explored the possibility of reducing grain MeHg levels by biochar amendment, and the underlying mechanisms. Pot (i.e., rice cultivation in biochar amended soils) and batch experiments (i.e., incubation of amended soils under laboratory conditions) were carried out, to investigate MeHg dynamics (i.e., MeHg production, partitioning and phytoavailability in paddy soils, and MeHg uptake by rice) under biochar amendment (1-4% of soil mass). We demonstrate for the first time that biochar amendment could evidently reduce grain MeHg levels (49-92%). The declines could be attributed to the combined effects of: (1) increased soil MeHg concentrations, probably explained by the release of sulfate from biochar and thus enhanced microbial production of MeHg (e.g., by sulfate-reducing bacteria), (2) MeHg immobilization in soils, facilitated by the large surface areas and high organosulfur content of biochar, and (3) biodilution of MeHg in rice grains, due to the increased grain biomass under biochar amendment (35-79%). These observations together with mechanistic explanations improve understanding of MeHg dynamics in soil-rice systems, and support the possibility of reducing MeHg phytoaccumulation under biochar amendment. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. Nicaragua - Rice and Banana Farmers

    Data.gov (United States)

    Millennium Challenge Corporation — This report is an impact evaluation of two components of the Rural Business Development Program (RBD) in Nicaragua, specifically the components benefitting rice and...

  17. Improvement of nitrogen accumulation and metabolism in rice (Oryza sativa L.) by the endophyte Phomopsis liquidambari.

    Science.gov (United States)

    Yang, Bo; Ma, Hai-Yan; Wang, Xiao-Mi; Jia, Yong; Hu, Jing; Li, Xia; Dai, Chuan-Chao

    2014-09-01

    The fungal endophyte Phomopsis liquidambari can enhance nitrogen (N) uptake and metabolism of rice plants under hydroponic conditions. To investigate the effects of P. liquidambari on N accumulation and metabolism in rice (Oryza sativa L.) under field conditions during the entire growing season (S1, the seedling stage; S2, the tillering stage; S3, the heading stage; S4, the ripening stage), we utilized pot experiments to examine metabolic and physiological levels in both shoot and root tissues of rice, with endophyte (E+) and without endophyte (E-), in response to three different N levels. We found that under low-N treatment, P. liquidambari symbiosis increased the rice yield and N use efficiency by 12% and by 11.59%, respectively; that the total N contents in E+ rice plants at the four growth stages were separately increased by 29.05%, 14.65%, 21.06% and 18.38%, respectively; and that the activities of nitrate reductase and glutamine synthetase in E+ rice roots and shoots were significantly increased by fungal infection during the S1 to S3 stages. Moreover, P. liquidambari significantly increased the free NH4(+), NO3(-), amino acid and soluble protein contents in infected rice tissues under low-N treatment during the S1 to S3 stages. The obtained results offer novel data concerning the systemic changes induced by P. liquidambari in rice during the entire growth period and confirm the hypothesis that the rice-P. liquidambari interaction improved the N accumulation and metabolism of rice plants, consequently increasing rice N utilization in nutrient-limited soil. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  18. Water reuse and cost-benefit of pumping at different spatial levels in a rice irrigation system in UPRIIS, Philippines

    Science.gov (United States)

    Hafeez, M. M.; Bouman, B. A. M.; Van de Giesen, N.; Mushtaq, S.; Vlek, P.; Khan, S.

    As agricultural water resources in Asia become increasingly scarce, the irrigation efficiency of rice must be improved. However, in this region there is very limited information available about water use efficiency across spatial levels in irrigation systems. This study quantifies the volume of water reuse and its related cost-benefits at five different spatial levels, ranging from 1500 ha to 18,000 ha, under gravity-fed irrigation system in Upper Pumpanga River Integrated Irrigation System (UPRIIS), Philippines. The major sources of water reuse are considered, namely groundwater pumping, pumping from creeks, combined use and irrigation supplies from check dams. The volume of water available from all four sources of water reuse was quantified through extensive measurements. Production functions were developed to quantify water-yield relationships and to measure the economic value of water reuse. This study was conducted during the dry season of 2001, which existed from 19 November 2000 until 18 May 2001. The water reuse by pumping and check dams was 7% and 22% of the applied surface water at District 1 level. The reuse of surface water through check dams increased linearly with 4.6 Mm 3 per added 1000 ha. Similarly, the total amount of reused water from pumping is equivalent to 30% of the water lost through rice evapotranspiration during the dry season 2001. The results showed that water reuse plays a dominant role in growing a rice crop during the dry season. The result showed no difference in pumping costs between the creek (US0.011/m 3) and shallow pumps (US0.012/m 3). The marginal value of productivity (MVP) of water reuse from creek (US0.044/m 3) was slightly higher than the water reuse through the pumping ground water (US0.039/m 3). Results also indicated that the total volume pumped per ha (m 3/ha) was ranging from 0.39 to 6.93 m 3/ha during the dry season. The results clearly indicate that the quantification of amount of water reuse is very crucial for

  19. Sorghum and rice: Mali

    International Nuclear Information System (INIS)

    2003-01-01

    Agriculture is the mainstay of the Malian economy and yet cereal imports absorb 6.5% of GDP. Food self-sufficiency is therefore a national priority. The Joint FAO/IAEA Division is supporting a programme to improve local varieties of sorghum and rice by using nuclear techniques to develop new cultivars that will produce higher yields under Mali's semi-arid climatic conditions. (IAEA)

  20. White rice consumption and CVD risk factors among Iranian population.

    Science.gov (United States)

    Khosravi-Boroujeni, Hossein; Sarrafzadegan, Nizal; Mohammadifard, Noushin; Sajjadi, Firouzeh; Maghroun, Maryam; Asgari, Sedigheh; Rafieian-Kopaei, Mahmoud; Azadbakht, Leila

    2013-06-01

    Association between white rice intake and risk factors of cardiovascular diseases remained uncertain. Most of the previous published studies have been done in western countries with different lifestyles, and scant data are available from the Middle East region, including Iran. This cross-sectional study was conducted in the structure of Isfahan Healthy Heart Program (IHHP) to assess the association between white rice consumption and risk factors of cardiovascular diseases. In the present study, 3,006 men were included from three counties of Isfahan, Najafabad, and Arak by multistage cluster random-sampling method. Dietary intake was assessed with a 49-item food frequency questionnaire (FFQ). Laboratory assessment was done in a standardized central laboratory. Outcome variables were fasting blood glucose, serum lipid levels, and anthropometric variables. Socioeconomic and demographic data, physical activity, and body mass index (BMI) were considered covariates and were adjusted in analysis. In this study, Student's t-test, chi-square test, and logistic regression were used for statistical analyses. Means of BMI among those subjects who consumed white rice less than 7 times per week and people who consumed 7-14 times per week were almost similar--24.8 +/- 4.3 vs 24.5 +/- 4.7 kg/m2. There was no significant association between white rice consumption and risk factors of cardiovascular diseases, such as fasting blood sugar arid serum lipid profiles. Although whole grain consumption has undeniable effect on preventing cardiovascular disease risk, white rice consumption was not associated with cardiovascular risks among Iranian men in the present study. Further prospective studies with a semi-quantitative FFQ or dietary record questionnaire, representing type and portion-size of rice intake as well as cooking methods and other foods consumed with rice that affect glycaemic index (GI) of rice, are required to support our finding and to illustrate the probable mechanism.

  1. Detection of DNA fingerprints of cultivated rice by hybridization with a human minisatellite DNA probe

    International Nuclear Information System (INIS)

    Dallas, J.F.

    1988-01-01

    A human minisatellite DNA probe detects several restriction fragment length polymorphisms in cultivars of Asian and African rice. Certain fragments appear to be inherited in a Mendelian fashion and may represent unlinked loci. The hybridization patterns appear to be cultivar-specific and largely unchanged after the regeneration of plants from tissue culture. The results suggest that these regions of the rice genome may be used to generate cultivar-specific DNA fingerprints. The demonstration of similarity between a human minisatellite sequence and polymorphic regions in the rice genome suggests that such regions also occur in the genomes of many other plant species

  2. Improving the phenotypic expression of rice genotypes: Rethinking “intensification” for production systems and selection practices for rice breeding

    Directory of Open Access Journals (Sweden)

    Norman Uphoff

    2015-06-01

    Full Text Available Intensification in rice crop production is generally understood as requiring increased use of material inputs: water, inorganic fertilizers, and agrochemicals. However, this is not the only kind of intensification available. More productive crop phenotypes, with traits such as more resistance to biotic and abiotic stresses and shorter crop cycles, are possible through modifications in the management of rice plants, soil, water, and nutrients, reducing rather than increasing material inputs. Greater factor productivity can be achieved through the application of new knowledge and more skill, and (initially more labor, as seen from the System of Rice Intensification (SRI, whose practices are used in various combinations by as many as 10 million farmers on about 4 million hectares in over 50 countries. The highest yields achieved with these management methods have come from hybrids and improved rice varieties, confirming the importance of making genetic improvements. However, unimproved varieties are also responsive to these changes, which induce better growth and functioning of rice root systems and more abundance, diversity, and activity of beneficial soil organisms. Some of these organisms as symbiotic endophytes can affect and enhance the expression of rice plants' genetic potential as well as their phenotypic resilience to multiple stresses, including those of climate change. SRI experience and data suggest that decades of plant breeding have been selecting for the best crop genetic endowments under suboptimal growing conditions, with crowding of plants that impedes their photosynthesis and growth, flooding of rice paddies that causes roots to degenerate and forgoes benefits derived from aerobic soil organisms, and overuse of agrochemicals that adversely affect these organisms as well as soil and human health. This review paper reports evidence from research in India and Indonesia that changes in crop and water management can improve the

  3. Deforestation and Rice: Using Methods in Modeling and Remote Sensing to Project Patterns of Forest Change in Eastern Madagascar

    Science.gov (United States)

    Armstrong, A. H.; Fatoyinbo, T. E.; Fischer, R.; Huth, A.; Shugart, H. H.

    2013-12-01

    In the species rich tropics, forest conservation is often eclipsed by anthropogenic disturbance, resulting in a heightened need for an accurate assessment of biomass and the gaining of predictive capability before these ecosystems disappear. The combination of multi-temporal remote sensing data, field data and forest growth modeling to quantify carbon stocks and flux is therefore of great importance. In this study, we utilize these methods to (1) improve forest biomass and carbon flux estimates for the study region in Eastern Madagascar, and (2) initialize an individual-based growth model that incorporates the anthropogenic factors causing deforestation to project ecosystem response to future environmental change. Recent studies have shown that there is a direct correlation between the international rice market and rates of deforestation in tropical countries such as Madagascar (see Minten et al., 2006). Further, although law protects the remaining forest areas, dictatorships and recent political unrest have lead to poor or non-existent enforcement of precious wood and forest protection over the past 35 years. Our approach combined multi-temporal remote sensing analysis and ecological modeling using a theoretical and mathematical approach to assess biomass change and to understand how tree growth and life history (growth response patterns) relate to past and present economic variability in Madagascar forests of the eastern Toamasina region. We measured rates of change of deforestation with respect to politics and the price of rice by classifying and comparing biomass using 30m Landsat during 5 political regime time periods (1985-1992, 1993-1996, 1997-2001, 2002-2008, 2009 to present). Forest biomass estimations were calibrated using forest inventory data collected over 3 growing seasons over the study region (130 small circular plots in primary forest). This information was then built into the previously parameterized (Armstrong et al., in prep and Fischer et al in

  4. Management of soil physical properties of lowland puddled rice soil for sustainable food production

    International Nuclear Information System (INIS)

    Bhagat, R.M.

    2004-01-01

    About 3 billion people who rely on rice as their staple food today will have multiplied to some 4.4 billion by the middle of this century. With rice demand growing at an average rate of about 3 percent annually, 70 percent more rice has to be produced in next 30 years compared to present day production levels. More rice has to come from less favorable environments, with less water and nutrients. Agricultural population densities on Asia's rice producing lands are among the highest in the world and continue to increase at a remarkable rate. Rice has widely adapted itself: to the hot Australian and Egyptian deserts, to the cool Himalayan foothills of Nepal. Hill tribes in Southeast Asia plant it on slash-and-burned forest slopes; that's upland rice. However, low lying areas in Asia, which are subject to uncontrolled flooding, are home to more than 100 million poor farmers. Puddling or wet tillage in rice, decreases total soil porosity only slightly, but markedly changes porosity distribution with both storage and residual porosity increasing at the expanse of transmission porosity. Soil texture plays an important role in soil water retention following soil disturbance. Cracking pattern of the soils is studied after six years of different levels of regular addition of residue. Cracking pattern at a soil surface affects the hydrodynamic properties of soil. Cracking extends the soil-air interface into the soil profile and thereby may increase the moisture loss through evaporation

  5. A dynamic compartment model for evaluating transfer of radionuclide into rice-plant after acute release

    International Nuclear Information System (INIS)

    Keum, D.K.; Lee, H.S.; Choi, H.J.; Kang, H.S.; Lee, C.W.

    2004-01-01

    In this paper a dynamic compartment model is presented to estimate the transfer of radionuclides deposited on rice-fields after an accidental release. The present model includes a surface water compartment and a direct shoot-base absorption from the surface water to the rice plant to account for the flooded condition of rice-fields, which are major features discriminating the present model from the existing model. In order to test the validity of model, a number of simulated Cs-137 deposition experiments were performed while growing rice-plant in a green house. For the experiments the radionuclide was indirectly treated in the root zone soil before transplanting and on the surface water without a direct contamination of rice-plant after transplanting. In the first year of deposition the shoot-base absorption was a predominant process for the transfer of radionuclide into rice when the radionuclide was treated on the surface water, and from the second year, the root-uptake was dominant. The model calculation predicted reasonably well the first year experimental result showing the importance of shoot base absorption as well as the concentration of rice-body and grain measured from respective rice-plant grown consecutively on the contaminated soils for years. (author)

  6. Arsenic uptake and accumulation in rice (Oryza sativa L.) with selenite fertilization and water management.

    Science.gov (United States)

    Wan, Yanan; Camara, Aboubacar Younoussa; Huang, Qingqing; Yu, Yao; Wang, Qi; Li, Huafen

    2018-07-30

    The accumulation of arsenic (As) in rice grain is a potential threat to human health. Our study investigated the possible mediatory role of selenite fertilization on As uptake and accumulation by rice (Oryza sativa L.) under different water management regimes (aerobic or flooded) in a pot experiment. Soil solutions were also extracted during the growing season to monitor As dynamics. Results showed that As contents in the soil solutions, seedlings, and mature rice were higher under flooded than under aerobic water management. Under aerobic conditions, selenite additions slightly increased As concentrations in soil solutions (in the last two samplings), but decreased As levels in rice plants. Relative to the control, 0.5 mg kg -1 selenite decreased rice grain As by 27.5%. Under flooded conditions, however, selenite additions decreased As in soil solutions, while increased As in rice grain. Tendencies also showed that selenite additions decreased the proportion of As in rice shoots both at the seedling stage and maturity, and were more effective in aerobic soil. Our results demonstrate that the effect of selenite fertilizer on As accumulation by rice is related to water management. Copyright © 2018 Elsevier Inc. All rights reserved.

  7. Impacts of aerosol pollutant mitigation on lowland rice yields in China

    Science.gov (United States)

    Zhang, Tianyi; Li, Tao; Yue, Xu; Yang, Xiaoguang

    2017-10-01

    Aerosol pollution in China is significantly altering radiative transfer processes and is thereby potentially affecting rice photosynthesis and yields. However, the response of rice photosynthesis to aerosol-induced radiative perturbations is still not well understood. Here, we employ a process-based modelling approach to simulate changes in incoming radiation (RAD) and the diffuse radiation fraction (DF) with aerosol mitigation in China and their associated impacts on rice yields. Aerosol reduction has the positive effect of increasing RAD and the negative effect of decreasing DF on rice photosynthesis and yields. In rice production areas where the average RAD during the growing season is lower than 250 W m-2, aerosol reduction is beneficial for higher rice yields, whereas in areas with RAD>250 W m-2, aerosol mitigation causes yield declines due to the associated reduction in the DF, which decreases the light use efficiency. As a net effect, rice yields were estimated to significantly increase by 0.8%-2.6% with aerosol concentrations reductions from 20 to 100%, which is lower than the estimates obtained in earlier studies that only considered the effects of RAD. This finding suggests that both RAD and DF are important processes influencing rice yields and should be incorporated into future assessments of agricultural responses to variations in aerosol-induced radiation under climate change.

  8. Impacts of aerosol mitigation on Chinese rice photosynthesis: An integrated modeling approach

    Science.gov (United States)

    Zhang, T.; Li, T.; Yue, X.; Yang, X.

    2017-12-01

    Aerosol pollution in China is significantly altering radiative transfer processes and is thereby potentially affecting rice photosynthesis. However, the response of rice photosynthesis to aerosol-induced radiative perturbations is still not well understood. Here, we employ an integrated process-based modeling approach to simulate changes in incoming radiation (RAD) and the diffuse radiation fraction (DF) with aerosol mitigation in China and their associated impacts on rice yields. Aerosol reduction has the positive effect of increasing RAD and the negative effect of decreasing DF on rice photosynthesis and yields. In rice production areas where the average RAD during the growing season is lower than 250 W m-2, aerosol reduction is beneficial for higher rice yields, whereas in areas with RAD>250 W m-2, aerosol mitigation causes yield declines due to the associated reduction in the DF, which decreases the light use efficiency. This response pattern and threshold are similar with observations, even through more data are needed in future investigation. As a net effect, rice yields were estimated to significantly increase by 0.8-2.6% with aerosol concentrations reductions from 20 to 100%, which is lower than the estimates obtained in earlier studies that only considered the effects of RAD. This finding suggests that both RAD and DF are important processes influencing rice yields and should be incorporated into future assessments of agricultural responses to variations in aerosol-induced radiation under climate change.

  9. A Study Of Biogas Production From Rice Straw In An Underground Digester

    International Nuclear Information System (INIS)

    Akpabio, O; Sambo, A.S; Fai, F

    2002-01-01

    The rising cost of petroleum products, the growing world population with diminishing resources and increasing wastes has brought about the need for sourcing alternative resources in order to bring about sustainable development. In this regard. this research was conceived to innovate design and construction of a biogas digester and to study the production of biogas from rice straw. An underground biogas digester was designed. Constructed and tested. The test digestion produced biogas yield of 0.020 M/KXg from green cow dung. In the study of biogas production from rice straw, four bench digesters of one d m3 (I litre) each were used. The bench digester produced biogas yields of 0.0149 m3/kg of rice straw, 0.0389 m3/kg of a mixture of rice straw and cow dung and 0.0792 m3/kg of cow dung. Scaled up digestion of rice straw in the underground digester gave biogas yield of 7.37 x 104 m3/kg. The biogas produced from rice straw was found to contain 38.52% of carbon dioxide and no hydrogen sulphide. It was concluded that the biogas generation from rice straw was encouraging, but scale up yields was low. The limiting factors on biogas production from rice straw with the effect of digester design or biogas production are presented and discussed

  10. Nitrogen fixation in rice systems: State of knowledge and future prospects

    International Nuclear Information System (INIS)

    Ladha, J.K.; Reddy, P.M.

    2001-01-01

    Rice is the most important cereal crop. In the next three decades, the world will need to produce about 60% more rice than today's global production to feed the extra billion people. Nitrogen is the major nutrient limiting rice production. Development of fertilizer-responsive varieties in the Green Revolution, coupled with the realization by farmers of the importance of nitrogen, has led to high rates of N fertilizer use on rice. Increased future demand for rice will entail increased application of fertilizer N. Awareness is growing, however, that such an increase in agricultural production needs to be achieved without endangering the environment. To achieve food security through sustainable agriculture, the requirement for fixed nitrogen must increasingly met by biological nitrogen fixation (BNF) rather than by using nitrogen fixed industrially. It is thus imperative to improve existing BNF systems and develop N 2 -fixing non-leguminous crops such as rice. Here we review the potentials and constraints of conventional BNF systems in rice agriculture, as well as the prospects of achieving in planta nitrogen fixation in rice. (author)

  11. Diversity of some endophytic fungi associated with rice black bug Paraeucosmetus pallicornis on rice plant

    OpenAIRE

    Nur, Amin; La Daha; Nurariaty, Agus; Ade, Rosmana; Muh., Fadlan

    2015-01-01

    A new rice insect pest was sighted in some rice producing areas of South Sulawesi Province, Indonesia. This pest is rice black bugs Paraeucosmetus pallicornis. The research aimed to isolation of fungi associated with rice black bugs Paraeucosmetus pallicornis, so as to know the cause of a bitter taste to the rice. The isolation of the fungi consist of three kinds of treatment, namely rice black bugs without sterilization, with sterilization and rice black bugs cut and sterilized. The resul...

  12. Establishment of a rice-duck integrated farming system and its effects on soil fertility and rice disease control

    Science.gov (United States)

    Teng, Qing; Hu, Xue-Feng; Cheng, Chang; Luo, Zhi-Qing; Luo, Fan

    2015-04-01

    Rice-duck integrated farming is an ecological farming system newly established in some areas of southern China . It was reported that the ducks walking around the paddy fields is beneficial to control weed hazards and reduce rice pests and diseases. To study and evaluate the effects of the rice-duck integrated farming on soil fertility and rice disease control, a field experiment of rice cultivation was carried out in the suburb of Shanghai in 2014. It includes a treatment of raising ducks in the fields and a control without ducks. The treatment was implemented by building a duck coop nearby the experimental fields and driving 15 ducks into a plot at daytime since the early stage of rice growth. Each plot is 667 m2 in area. The treatment and control were replicated for three times. No any herbicides, pesticides, fungicides and chemical fertilizers were applied during the experiment to prevent any disturbance to duck growing and rice weed hazards and disease incidences from agrochemicals. The results are as follows: (1) The incidences of rice leaf rollers (Cnaphalocrocis medinalis) and stem borers treated with ducks, 0.45%and 1.18% on average, respectively, are lower than those of the control, 0.74% and 1.44% on average, respectively. At the late stage of rice growth, the incidence of rice sheath blight treated with ducks, 13.15% on average, is significantly lower than that of the control, 16.9% on average; and the incidence of rice planthoppers treated with ducks, 11.3 per hill on average, is also significantly lower than that of the control, 47.4 per hill on average. (2) The number of weeds in the plots treated with ducks, 8.3 per m2 on average, is significantly lower than that of the control, 87.5 m2 on average. (3) Raising ducks in the fields could also enhance soil enzyme activity and nutrient status. At the late stage of rice growth, the activities of urease, phosphatase, sucrase and catalase in the soils treated with ducks are 1.39 times, 1.40 times, 1

  13. Melting ice, growing trade?

    Directory of Open Access Journals (Sweden)

    Sami Bensassi

    2016-05-01

    Full Text Available Abstract Large reductions in Arctic sea ice, most notably in summer, coupled with growing interest in Arctic shipping and resource exploitation have renewed interest in the economic potential of the Northern Sea Route (NSR. Two key constraints on the future viability of the NSR pertain to bathymetry and the future evolution of the sea ice cover. Climate model projections of future sea ice conditions throughout the rest of the century suggest that even under the most “aggressive” emission scenario, increases in international trade between Europe and Asia will be very low. The large inter-annual variability of weather and sea ice conditions in the route, the Russian toll imposed for transiting the NSR, together with high insurance costs and scarce loading/unloading opportunities, limit the use of the NSR. We show that even if these obstacles are removed, the duration of the opening of the NSR over the course of the century is not long enough to offer a consequent boost to international trade at the macroeconomic level.

  14. Broken rice kernels and the kinetics of rice hydration and texture during cooking.

    Science.gov (United States)

    Saleh, Mohammed; Meullenet, Jean-Francois

    2013-05-01

    During rice milling and processing, broken kernels are inevitably present, although to date it has been unclear as to how the presence of broken kernels affects rice hydration and cooked rice texture. Therefore, this work intended to study the effect of broken kernels in a rice sample on rice hydration and texture during cooking. Two medium-grain and two long-grain rice cultivars were harvested, dried and milled, and the broken kernels were separated from unbroken kernels. Broken rice kernels were subsequently combined with unbroken rice kernels forming treatments of 0, 40, 150, 350 or 1000 g kg(-1) broken kernels ratio. Rice samples were then cooked and the moisture content of the cooked rice, the moisture uptake rate, and rice hardness and stickiness were measured. As the amount of broken rice kernels increased, rice sample texture became increasingly softer (P hardness was negatively correlated to the percentage of broken kernels in rice samples. Differences in the proportions of broken rice in a milled rice sample play a major role in determining the texture properties of cooked rice. Variations in the moisture migration kinetics between broken and unbroken kernels caused faster hydration of the cores of broken rice kernels, with greater starch leach-out during cooking affecting the texture of the cooked rice. The texture of cooked rice can be controlled, to some extent, by varying the proportion of broken kernels in milled rice. © 2012 Society of Chemical Industry.

  15. The Haitian Rice Tariff

    Directory of Open Access Journals (Sweden)

    Mats Lundahl

    2016-04-01

    Full Text Available Se ha argumentado que los problemas agríco-las de Haití derivan de la tarifa del arroz de a mediados de los años noventa. Antes, supues-tamente, Haití fue autosuficiente, abastecida por su producción doméstica. Después de la reducción, el mercado haitiano se inundó en importaciones de arroz barato de los EEUU, lo cual despojó a los campesinos de sus fincas, convirtiendolos en migrantes internos, hacia los empleos de bajo pago de las ciudades. El artículo rechaza ese argumento y demuestra que es falso. La malnutrición fue un fenómeno extendido en Haití mucho antes de la reducción de la tarifa del arroz, la cual tampoco tuvo un gran impacto en la importación y la producción doméstica del arroz. Lo que sí impulsó el aumento de las importaciones fue el crecimiento de la población. También el artículo argumenta que un aumento de la tarifa del arroz no solucionará el problema de la alimentación que sufre Haití. English: It has been argued that Haiti’s agricultural problems derive from the reduction of the rice tariff in the mid-1990s. Before that Haiti was allegedly able to meet its food needs by domestic production. After the reduction the Haitian market was swamped by imports of cheap American rice which drove the farmers off their lands and forced them to migrate to low-wage industrial jobs in the cities. The article demonstrates that the argument is false. Malnutrition was widespread in Haiti long before the rice tariff reduction, and the latter did not have much of an impact on rice imports and domestic production. Instead, the main driving force behind imports appears to be population growth. It is also shown that an increase of the rice tariff will not solve Haiti’s food problem.

  16. Nutritional test of rice in rats

    International Nuclear Information System (INIS)

    Horii, Masaji; Yoshikawa, Seiji

    1980-01-01

    Behaviors on N derived from rice were followed up by means of 15 N-labeled rice. In the first test, the single unpolished rice diet and the diet of rice and bean lecithin (4.5%) produced urinary excretion of 10 - 12% of 15 N, and that of rice and mannan from devil's tongue (3%), 16 - 20%. The single unpolished rice diet showed slightly more urinary excretion of 15 N, and the other 2 diets showed a similar proportion of 15 N in 3 days. The results indicated that the diet containing mannan from devil's tongue resulted in a poor N absorption by rice, a large quantity of N being excreted over a long period of time. This suggested differences and time lags in the excretion of rice N into the stool and urine depending on the diet constitution. With the unpolished rice diet, a small quantity of rice protein was not absorbed, but was excreted. In the 2nd test with 15 N-polished rice, the urinary excretion rate was 11.44% for a single rice diet, 11.16% for a mixed diet of rice and bean (1:1 in protein), 10.99% for rice and egg yolk, 9.66% for rice, bean and egg yolk and 8.10% for rice and bean lecithin. This decrease in urinary excretion indicated a corresponding increase in absorption of rice protein. (Chiba, N.)

  17. Development and assessment of a lysophospholipid-based deep learning model to discriminate geographical origins of white rice.

    Science.gov (United States)

    Long, Nguyen Phuoc; Lim, Dong Kyu; Mo, Changyeun; Kim, Giyoung; Kwon, Sung Won

    2017-08-17

    Geographical origin determination of white rice has become the major issue of food industry. However, there is still lack of a high-throughput method for rapidly and reproducibly differentiating the geographical origins of commercial white rice. In this study, we developed a method that employed lipidomics and deep learning to discriminate white rice from Korea to China. A total of 126 white rice of 30 cultivars from different regions were utilized for the method development and validation. By using direct infusion-mass spectrometry-based targeted lipidomics, 17 lysoglycerophospholipids were simultaneously characterized within minutes per sample. Unsupervised data exploration showed a noticeable overlap of white rice between two countries. In addition, lysophosphatidylcholines (lysoPCs) were prominent in white rice from Korea while lysophosphatidylethanolamines (lysoPEs) were enriched in white rice from China. A deep learning prediction model was built using 2014 white rice and validated using two different batches of 2015 white rice. The model accurately discriminated white rice from two countries. Among 10 selected predictors, lysoPC(18:2), lysoPC(14:0), and lysoPE(16:0) were the three most important features. Random forest and gradient boosting machine models also worked well in this circumstance. In conclusion, this study provides an architecture for high-throughput classification of white rice from different geographical origins.

  18. Mercury flow through an Asian rice-based food web

    International Nuclear Information System (INIS)

    Abeysinghe, Kasun S.; Qiu, Guangle; Goodale, Eben; Anderson, Christopher W.N.; Bishop, Kevin; Evers, David C.; Goodale, Morgan W.; Hintelmann, Holger; Liu, Shengjie

    2017-01-01

    Mercury (Hg) is a globally-distributed pollutant, toxic to humans and animals. Emissions are particularly high in Asia, and the source of exposure for humans there may also be different from other regions, including rice as well as fish consumption, particularly in contaminated areas. Yet the threats Asian wildlife face in rice-based ecosystems are as yet unclear. We sought to understand how Hg flows through rice-based food webs in historic mining and non-mining regions of Guizhou, China. We measured total Hg (THg) and methylmercury (MeHg) in soil, rice, 38 animal species (27 for MeHg) spanning multiple trophic levels, and examined the relationship between stable isotopes and Hg concentrations. Our results confirm biomagnification of THg/MeHg, with a high trophic magnification slope. Invertivorous songbirds had concentrations of THg in their feathers that were 15x and 3x the concentration reported to significantly impair reproduction, at mining and non-mining sites, respectively. High concentrations in specialist rice consumers and in granivorous birds, the later as high as in piscivorous birds, suggest rice is a primary source of exposure. Spiders had the highest THg concentrations among invertebrates and may represent a vector through which Hg is passed to vertebrates, especially songbirds. Our findings suggest there could be significant population level health effects and consequent biodiversity loss in sensitive ecosystems, like agricultural wetlands, across Asia, and invertivorous songbirds would be good subjects for further studies investigating this possibility. - Highlights: • Hg concentrations were measured across rice-based food webs in Guizhou, China. • Of 38 animal species, THg concentrations were highest for invertivorous songbirds. • High THg levels in rice pests and in granivorous birds suggest rice as a source. • Levels of THg in songbird feathers at mining site were among highest ever recorded. • Even at non-mining site, THg in such

  19. Functional analysis of the rice rubisco activase promoter in transgenic Arabidopsis

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Zhipan; Lu, Qingtao; Wen, Xiaogang [Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093 (China); Chen, Fan [Key Laboratory of Molecular and Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100080 (China); Lu, Congming, E-mail: lucm@ibcas.ac.cn [Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093 (China)

    2012-02-17

    Highlights: Black-Right-Pointing-Pointer Rice rubisco activase promoter was analyzed in transgenic Arabidopsis system. Black-Right-Pointing-Pointer Region conferring tissue specific and light inducible expression of Rca was identified. Black-Right-Pointing-Pointer -58 to +43 bp region mediates tissue-specific expression of rice Rca. Black-Right-Pointing-Pointer Light inducible expression of rice Rca is mediated by -297 to -58 bp region. Black-Right-Pointing-Pointer Rice nuclear proteins bind specifically with the light inducible region. -- Abstract: To gain a better understanding of the regulatory mechanism of the rice rubisco activase (Rca) gene, variants of the Rca gene promoter (one full-length and four deletion mutants) fused to the coding region of the bacterial reporter gene {beta}-glucuronidase (GUS) were introduced into Arabidopsis via Agrobacterium-mediated transformation. Our results show that a 340 bp fragment spanning from -297 to +43 bp relative to the transcription initiation site is enough to promote tissue-specific and light-inducible expression of the rice Rca gene as done by the full-length promoter (-1428 to +43 bp). Further deletion analysis indicated that the region conferring tissue-specificity of Rca expression is localized within a 105 bp fragment from -58 to +43 bp, while light-inducible expression of Rca is mediated by the region from -297 to -58 bp. Gel shift assays and competition experiments demonstrated that rice nuclear proteins bind specifically with the fragment conferring light responsiveness at more than one binding site. This implies that multiple cis-elements may be involved in light-induced expression of the rice Rca gene. These works provide a useful reference for understanding transcriptional regulation mechanism of the rice Rca gene, and lay a strong foundation for further detection of related cis-elements and trans-factors.

  20. Functional analysis of the rice rubisco activase promoter in transgenic Arabidopsis

    International Nuclear Information System (INIS)

    Yang, Zhipan; Lu, Qingtao; Wen, Xiaogang; Chen, Fan; Lu, Congming

    2012-01-01

    Highlights: ► Rice rubisco activase promoter was analyzed in transgenic Arabidopsis system. ► Region conferring tissue specific and light inducible expression of Rca was identified. ► −58 to +43 bp region mediates tissue-specific expression of rice Rca. ► Light inducible expression of rice Rca is mediated by −297 to −58 bp region. ► Rice nuclear proteins bind specifically with the light inducible region. -- Abstract: To gain a better understanding of the regulatory mechanism of the rice rubisco activase (Rca) gene, variants of the Rca gene promoter (one full-length and four deletion mutants) fused to the coding region of the bacterial reporter gene β-glucuronidase (GUS) were introduced into Arabidopsis via Agrobacterium-mediated transformation. Our results show that a 340 bp fragment spanning from −297 to +43 bp relative to the transcription initiation site is enough to promote tissue-specific and light-inducible expression of the rice Rca gene as done by the full-length promoter (−1428 to +43 bp). Further deletion analysis indicated that the region conferring tissue-specificity of Rca expression is localized within a 105 bp fragment from −58 to +43 bp, while light-inducible expression of Rca is mediated by the region from −297 to −58 bp. Gel shift assays and competition experiments demonstrated that rice nuclear proteins bind specifically with the fragment conferring light responsiveness at more than one binding site. This implies that multiple cis-elements may be involved in light-induced expression of the rice Rca gene. These works provide a useful reference for understanding transcriptional regulation mechanism of the rice Rca gene, and lay a strong foundation for further detection of related cis-elements and trans-factors.