Sample records for reveals early cenozoic

  1. Early cenozoic differentiation of polar marine faunas.

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    J Alistair Crame

    Full Text Available The widespread assumption that the origin of polar marine faunas is linked to the onset of major global cooling in the Late Eocene-Early Oligocene is being increasingly challenged. The Antarctic fossil record in particular is suggesting that some modern Southern Ocean taxa may have Early Eocene or even Paleocene origins, i.e. well within the Early Cenozoic greenhouse world. A global analysis of one of the largest marine clades at the present day, the Neogastropoda, indicates that not only is there a decrease in the number of species from the tropics to the poles but also a decrease in the evenness of their distribution. A small number of neogastropod families with predominantly generalist trophic strategies at both poles points to the key role of seasonality in structuring the highest latitude marine assemblages. A distinct latitudinal gradient in seasonality is temperature-invariant and would have operated through periods of global warmth such as the Early Cenozoic. To test this concept a second global analysis was undertaken of earliest Cenozoic (Paleocene neogastropods and this does indeed show a certain degree of faunal differentiation at both poles. The Buccinidae, s.l. is especially well developed at this time, and this is a major generalist taxon at the present day. There is an element of asymmetry associated with this development of Paleocene polar faunas in that those in the south are more strongly differentiated than their northern counterparts; this can in turn be linked to the already substantial isolation of the southern high latitudes. The key role of seasonality in the formation of polar marine faunas has implications for contemporary ecosystem structure and stability.

  2. Pacific plate slab pull and intraplate deformation in the early Cenozoic

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    N. P. Butterworth


    Full Text Available Large tectonic plates are known to be susceptible to internal deformation, leading to a~range of phenomena including intraplate volcanism. However, the space and time dependence of intraplate deformation and its relationship with changing plate boundary configurations, subducting slab geometries, and absolute plate motion is poorly understood. We utilise a buoyancy-driven Stokes flow solver, BEM-Earth, to investigate the contribution of subducting slabs through time on Pacific plate motion and plate-scale deformation, and how this is linked to intraplate volcanism. We produce a series of geodynamic models from 62 to 42 Ma in which the plates are driven by the attached subducting slabs and mantle drag/suction forces. We compare our modelled intraplate deformation history with those types of intraplate volcanism that lack a clear age progression. Our models suggest that changes in Cenozoic subduction zone topology caused intraplate deformation to trigger volcanism along several linear seafloor structures, mostly by reactivation of existing seamount chains, but occasionally creating new volcanic chains on crust weakened by fracture zones and extinct ridges. Around 55 Ma, subduction of the Pacific-Izanagi ridge reconfigured the major tectonic forces acting on the plate by replacing ridge push with slab pull along its northwestern perimeter, causing lithospheric extension along pre-existing weaknesses. Large-scale deformation observed in the models coincides with the seamount chains of Hawaii, Louisville, Tokelau and Gilbert during our modelled time period of 62 to 42 Ma. We suggest that extensional stresses between 72 and 52 Ma are the likely cause of large parts of the formation of the Gilbert chain and that localised extension between 62 and 42 Ma could cause late-stage volcanism along the Musicians volcanic ridges. Our models demonstrate that early Cenozoic changes in Pacific plate driving forces only cause relatively minor changes in Pacific

  3. Paleoclimate from fossil plants and application to the early Cenozoic Rocky Mountains (United States)

    Wing, S. L.


    Wladimir Köppen called vegetation "crystallized, visible climate," and his metaphor encouraged paleobotanists to climb the chain of inference from fossil plants to paleovegetation to paleoclimate. Inferring paleovegetation from fossils has turned out to be very difficult, however, and today most paleobotanical methods for inferring paleoclimate do not try to reconstruct paleovegetation as a first step. Three major approaches are widely use to infer paleoclimate from plant fossils: 1) phylogenetic inferences rely on the climatic distributions of extant relatives of fossils, 2) morphological inferences use present-day correlations of climate with plant morphology (e.g, leaf shape, wood anatomy), and 3) chemical inferences rely on correlations between climate and the stable isotopic composition of plants or organic compounds. Each approach makes assumptions that are hard to verify. Phylogenetic inference depends on accurate identification of fossils, and also assumes that evolution and/or extinction has not shifted the climatic distributions of plant lineages through time. On average this assumption is less valid for older time periods, but probably it is not radically wrong for the early Cenozoic. Morphological approaches don't require taxonomic identification of plant fossils, but do assume that correlations between plant form and climate have been constant over time. This assumption is bolstered if the ecophysiological cause of the morphology-climate correlation is well understood, but often it isn't. Stable isotopic approaches assume that present-day correlations between isotopic composition and climate apply to the past. Commonly the chemical and physiological mechanisms responsible for the correlation are moderately well known, but often the variation among different taxonomic and functional groups of plants is poorly characterized. In spite of limitations and uncertainties on all methods for inferring paleoclimate from fossil plants, broad patterns emerge from

  4. The initiation and tectonic regimes of the Cenozoic extension in the Bohai Bay Basin, North China revealed by numerical modelling (United States)

    Li, Lu; Qiu, Nansheng


    In this study the dynamic aspects of the Cenozoic extension in the Bohai Bay Basin are considered in the context of initial thickness of the crust and lithosphere, tectonic force, strain rate and thermal rheology, which are directly or indirectly estimated from a pure shear extensional model. It is accordingly reasonable to expect that, in the Bohai Bay Basin, the thickness variation could be present prior to the initiation of extension. The extensional deformation is localized by a thickness variation of the crust and lithosphere and the heterogeneity of the initial thickness plays an important role in rifting dynamics. The onset of rifting requires a critical tectonic force (initial tectonic force) to be applied, which then immediately begins to decay gradually. Rifting will only occur when the total effective buoyancy force of the subducting slab reaches a critical level, after a certain amount of subduction taking place. The magnitude of the tectonic force decreases with time in the early phase of rifting, which indicates the weakening due to the increase in geothermal gradient. In order to deform the continental lithosphere within the currently accepted maximum magnitude of the force derived from subducted slab roll-back, the following conditions should be satisfied: (1) the thickness of the continental lithosphere is significantly thin and less than 125 km and (2) the lithosphere has a wet and hot rheology, which provides implications for rheological layering in continental lithosphere. Our results are strongly supported by the ;crème brûlée; model, in which the lower crust and mantle are relatively ductile.

  5. Constraints on early Cenozoic underplating-driven uplift and denudation of western Scotland from low temperature thermochronometry (United States)

    Persano, Cristina; Barfod, Dan N.; Stuart, Finlay M.; Bishop, Paul


    Apatite (U-Th)/He and fission track data from profiles in western Scotland constrain the timing and magnitude of denudation during the early Cenozoic when the north Atlantic region was the site of intense magmatic activity related to the proto-Icelandic plume. Apatite helium ages vary from 77 ± 8 to 265 ± 27 Ma (± 2 σ) at Sgorr Dhonuill, Ballachulish, and from 104 ± 10 Ma to 166 ± 17 Ma at Clisham, Outer Hebrides. At both locations apatite fission track (AFT) ages are older than the corresponding He ages; at Clisham they vary from 189 ± 28 Ma to 242 ± 26 Ma, and from 186 ± 6 Ma to 257 ± 12 Ma at Sgorr Dhonuill. Apatite He ages increase linearly with elevation suggesting that the cooling rate remained constant in the late Mesozoic. However, the apatite He age profile requires a period of rapid cooling after ˜ 100 Ma. Apatite He ages predicted from the AFT-derived thermal histories are indistinguishable from measured He ages for a rapid cooling event of 1 to 10 Myr duration between 61 and 47 Ma at Sgorr Dhonuill and 65 to 49 Ma at Clisham. The combined apatite FT- and He-derived thermal histories constrain the early Cenozoic geothermal gradient at 39 ± 9 °C/km at Sgorr Dhonuill and 19 ± 6 °C/km at Clisham. Amounts of denudation related to the rapid cooling event vary from 1330 ± 230 m at Sgorr Dhonuill to 2250 ± 750 m at Clisham, in agreement with models that predict greater amounts of denudation where magmatic underplating is thicker. However, the direct correlation between underplating-driven surface uplift and denudation may only be apparent and a more complex link between spatial variation of surface uplift and denudation is suggested. The integration of results from multiple low-temperature thermochronometers, combined with inverse and forward modelling, provides a convincing and quantitative method to deduce onshore erosional histories, and provides critical information about the spatial distribution of erosion that cannot be derived from the

  6. A low-angle normal fault and basement structures within the Enping Sag, Pearl River Mouth Basin: Insights into late Mesozoic to early Cenozoic tectonic evolution of the South China Sea area (United States)

    Ye, Qing; Mei, Lianfu; Shi, Hesheng; Shu, Yu; Camanni, Giovanni; Wu, Jing


    The basement structure of the Cenozoic Enping Sag, within the Pearl River Mouth Basin on the northern margin of South China Sea, is revealed by borehole-constrained high-quality 3D seismic reflection data. Such data suggest that the Enping Sag is bounded in the north by a low-angle normal fault. We interpret this low-angle normal fault to have developed as the result of the reactivation of a pre-existing thrust fault part of a pre-Cenozoic thrust system. This is demonstrated by the selective reactivation of the pre-existing thrust and by diffuse contractional deformation recognized from the accurate analysis of basement reflections. Another significant result of this study is the finding of some residual rift basins within the basement of the Enping Sag. Both the thrust system and the residual basins are interpreted to have developed after the emplacement of continental margin arc-related granitoids (J3-K1) that define the basement within the study area. Furthermore, seismic sections show that the pre-existing residual rift basins are offset by the main thrust fault and they are both truncated by the Tg unconformity. These structural relationships, interpreted in the frame of previous studies, help us to reconstruct a six-event structural evolution model for the Enping Sag from the late Mesozoic to the early Cenozoic. In particular, we interpret the residual rift basins to have formed as the result of back-arc extension due to the slab roll-back of the Paleo-Pacific Plate subduction in the early K2. The thrust system has recorded a compressional event in the late K2 that followed the back-arc extension in the SCS area. The mechanism of this compressional event is still to be clarified, and might be related to continuous subduction of the Paleo-Pacific Plate or to the continent-continent collision between a micro-continental block and the South China margin.

  7. High resolution cyclostratigraphy of the early Eocene – new insights into the origin of the Cenozoic cooling trend

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    T. Westerhold


    Full Text Available Here we present a high-resolution cyclostratigraphy based on X-ray fluorescence (XRF core scanning data from a new record retrieved from the tropical western Atlantic (Demerara Rise, ODP Leg 207, Site 1258. The Eocene sediments from ODP Site 1258 cover magnetochrons C20 to C24 and show well developed cycles. This record includes the missing interval for reevaluating the early Eocene part of the Geomagnetic Polarity Time Scale (GPTS, also providing key aspects for reconstructing high-resolution climate variability during the Early Eocene Climatic Optimum (EECO. Detailed spectral analysis demonstrates that early Eocene sedimentary cycles are characterized by precession frequencies modulated by short (100 kyr and long (405 kyr eccentricity with a generally minor obliquity component. Counting of both the precession and eccentricity cycles results in revised estimates for the duration of magnetochrons C21r through C24n. Our cyclostratigraphic framework also corroborates that the geochronology of the Eocene Green River Formation (Wyoming, USA is still questionable mainly due to the uncertain correlation of the "Sixth tuff" to the GPTS.

    Right at the onset of the long-term Cenozoic cooling trend the dominant eccentricity-modulated precession cycles of ODP Site 1258 are interrupted by strong obliquity cycles for a period of ~800 kyr in the middle of magnetochron C22r. These distinct obliquity cycles at this low latitude site point to (1 a high-latitude driving mechanism on global climate variability from 50.1 to 49.4 Ma, and (2 seem to coincide with a significant drop in atmospheric CO2 concentration below a critical threshold between 2- and 3-times the pre-industrial level (PAL. The here newly identified orbital configuration of low eccentricity in combination with high obliquity amplitudes during this ~800-kyr period and the crossing of a critical pCO2 threshold may have led to the formation of the first ephemeral

  8. The final pulse of the Early Cenozoic adakitic activity in the Eastern Pontides Orogenic Belt (NE Turkey): An integrated study on the nature of transition from adakitic to non-adakitic magmatism in a slab window setting (United States)

    Eyuboglu, Yener; Dudas, Francis O.; Santosh, M.; Eroğlu-Gümrük, Tuğba; Akbulut, Kübra; Yi, Keewook; Chatterjee, Nilanjan


    The Eastern Pontides Orogenic Belt, one of the best examples of a fossil continental arc in the Alpine-Himalayan system, is characterized by adakitic magmatism during the Early Cenozoic. Popular models correlate the adakitic magmatism to syn- or post-collisional processes occurring after the collision between the Eastern Pontides Orogenic Belt and the Tauride Platform at the end of Late Mesozoic and/or beginning of the Cenozoic. We present new geological, petrological and chronological data from andesites and felsic tuffs exposed in the Bayburt area, in the southern part of the Eastern Pontides Orogenic Belt, and discuss the nature of the transition from adakitic to non-adakitic activities in a continental arc. Major, trace and rare earth element concentrations of both andesites and felsic tuffs clearly suggest that they are related to arc magmatism in a continental arc with adakitic composition. The isotopic compositions are permissive of mixing between a component similar to depleted mantle and a second component that is either mafic lower crust or subducted oceanic crust. 39Ar/40Ar hornblende and U/Pb zircon dating indicate that this adakitic magmatism in the Bayburt area ended by about 47 Ma, and transformed into non-adakitic, granitoid arc magmatism in the area immediately north of Bayburt in the Lutetian (∼46 Ma). Based on our new results in conjunction with available data, we propose that the beginning of northward rollback of a south-directed subducting slab, and simultaneous opening of a slab window related to ridge subduction, triggered both adakitic magmatism for approximately a 10 Myr period between 57.6 and 47 Ma and arc-parallel extension that caused the opening of the Early Cenozoic sedimentary basins. We also suggest that the shallow marine environment, in which Nummulite-bearing sandy limestones accumulated in the Early Cenozoic, was transformed into a saline-lake environment during the pyroclastic activity that produced the studied felsic tuffs

  9. An atmosphere-ocean GCM modelling study of the climate response to changing Arctic seaways in the early Cenozoic. (United States)

    Roberts, C. D.; Legrande, A. N.; Tripati, A. K.


    The report of fossil Azolla (a freshwater aquatic fern) in sediments from the Lomonosov Ridge suggests low salinity conditions occurred in the Arctic Ocean in the early Eocene. Restricted passages between the Arctic Ocean and the surrounding oceans are hypothesized to have caused this Arctic freshening. We investigate this scenario using a water-isotope enabled atmosphere-ocean general circulation model with Eocene boundary conditions including 4xCO2, 7xCH4, altered bathymetry and topography, and an estimated distribution of Eocene vegetational types. In one experiment, oceanic exchange between the Arctic Ocean and other ocean basins was restricted to two shallow (~250 m) seaways, one in the North Atlantic, the Greenland-Norwegian seaway, and the second connecting the Arctic Ocean with the Tethys Ocean, the Turgai Straits. In the restricted configuration, the Greenland-Norwegian seaway was closed and exchange through the Turgai Straits was limited to a depth of ~60 m. The simulations suggest that the severe restriction of Arctic seaways in the early Eocene may have been sufficient to freshen Arctic Ocean surface waters, conducive to Azolla blooms. When exchange with the Arctic Ocean is limited, salinities in the upper several hundred meters of the water column decrease by ~10 psu. In some regions, surface salinity is within 2-3 psu of the reported maximum modern conditions tolerated by Azolla (~5 psu). In the restricted scenario, salt is stored preferentially in the North Atlantic and Tethys oceans, resulting in enhanced meridional overturning, increased poleward heat transport in the North Atlantic western boundary current, and warming of surface and intermediate waters in the North Atlantic by several degrees. Increased sensible and latent heat fluxes from the North Atlantic Ocean, combined with a reduction in cloud albedo, also lead to an increase in surface air temperature of over much of North America, Greenland and Eurasia. Our work is consistent with

  10. New aero-gravity results from the Arctic: Linking the latest Cretaceous-early Cenozoic plate kinematics of the North Atlantic and Arctic Ocean

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    Døssing, Arne; Hopper, J.R.; Olesen, Arne Vestergaard


    The tectonic history of the Arctic Ocean remains poorly resolved and highly controversial. Details regarding break up of the Lomonosov Ridge from the Barents-Kara shelf margins and the establishment of seafloor spreading in the Cenozoic Eurasia Basin are unresolved. Significantly, the plate...... tectonic evolution of the Mesozoic Amerasia Basin is essentially unknown. The Arctic Ocean north of Greenland is at a critical juncture that formed at the locus of a Mesozoic three-plate setting between the Lomonosov Ridge, Greenland, and North America. In addition, the area is close to the European plate...... plateau against an important fault zone north of Greenland. Our results provide new constraints for Cretaceous-Cenozoic plate reconstructions of the Arctic. Key Points Presentation of the largest aero-gravity survey acquired over the Arctic Ocean Plate tectonic link between Atlantic and Arctic spreading...

  11. Contraints on the cenozoic position of Sundaland (United States)

    Powell, C. McA.; Johnson, B. D.


    The Cenozoic ocean-floor path of the continental fragment, Greater India, is overlapped by the present western part of Malaysia and Sumatra which are now part of a coherent continental block, Sundaland. This part of Southeast Asia must consequently have lain further east during the Cenozoic. The past positions of Greater India, combined with published paleomagnetic data indicating that Sundaland has lain near the Equator since the Permian and rotated anticlockwise since the mid-Cretaceous, are used to reconstruct constraints on the relative motions of Sundaland and the Indian—Australian plate in 10 m.y. intervals. We show that the northern part of Sundaland has rotated a minimum of 550 km westward with respect to India in the last 50 m.y. (since Early Eocene) with most of the rotation occurring in the latter half of the Cenozoic. Accepting geological evidence for an even larger Cenozoic sinistral shear between Sundaland and Australia, we construct a model consistent with ocean-floor and paleomagnetic constraints in which Australia and Sundaland made their closest approach between 10 and 20 m.y. ago (Miocene). The S-shape of the Banda Arcs may have formed since mid-Miocene from an initially linear, E-W trending pair of arcs by the interaction of the large sinistral shear between Sundaland and Australia and the collision of the leading edge of Australia with these paired arcs commencing approximately 15 m.y. ago.

  12. Urine Metabonomics Reveals Early Biomarkers in Diabetic Cognitive Dysfunction. (United States)

    Song, Lili; Zhuang, Pengwei; Lin, Mengya; Kang, Mingqin; Liu, Hongyue; Zhang, Yuping; Yang, Zhen; Chen, Yunlong; Zhang, Yanjun


    Recently, increasing attention has been paid to diabetic encephalopathy, which is a frequent diabetic complication and affects nearly 30% of diabetics. Because cognitive dysfunction from diabetic encephalopathy might develop into irreversible dementia, early diagnosis and detection of this disease is of great significance for its prevention and treatment. This study is to investigate the early specific metabolites biomarkers in urine prior to the onset of diabetic cognitive dysfunction (DCD) by using metabolomics technology. An ultra-high performance liquid-chromatography-quadrupole time-of-flight-mass spectrometry (UPLC-Q/TOF-MS) platform was used to analyze the urine samples from diabetic mice that were associated with mild cognitive impairment (MCI) and nonassociated with MCI in the stage of diabetes (prior to the onset of DCD). We then screened and validated the early biomarkers using OPLS-DA model and support vector machine (SVM) method. Following multivariate statistical and integration analysis, we found that seven metabolites could be accepted as early biomarkers of DCD, and the SVM results showed that the prediction accuracy is as high as 91.66%. The identities of four biomarkers were determined by mass spectrometry. The identified biomarkers were largely involved in nicotinate and nicotinamide metabolism, glutathione metabolism, tryptophan metabolism, and sphingolipid metabolism. The present study first revealed reliable biomarkers for early diagnosis of DCD. It provides new insight and strategy for the early diagnosis and treatment of DCD.

  13. Review of cenozoic ooidal ironstones (United States)

    van Houten, Franklyn B.


    Cenozoic (Tertiary) ooidal ironstones (COI) in 20 districts (39 deposits) developed between the equatorial zone and 60° N, except for one Eocene district in mid-southern latitude. Stratigraphic distribution. Paleocene OI occur in northern Pakistan, western Siberia, southern Germany, northwestern Venezuela, and northeastern Colombia: Eocene OI in western Siberia, southern Germany, northwestern Romania, central North Africa, central-west Saudi Arabia, southwestern Central Africa, northwestern Venezuela, northeastern Colombia, south-central USA, and northwestern Australia; Oligocene OI in northwest and west-central Kazakhstan, central Denmark, and north-central Iran?; Miocene OI in northwestern Venezuela, northeastern Colombia, and southeastern Malaysia; Pliocene OI in southeastern Ukraine. Geotectonic framework. Ten districts developed in an interior or fractured craton: five along the south-trending Uralian Seaway, and one along the east-trending Northern European Seaway, the south-trending Trans-Saharan Seaway, in or near an early Red Sea embayment, in southeastern Malaysia, and in northwestern Australia. Ten districts lay near a eratonic margin: one along divergent margin and nine along the broad east-trending Caribbean and Tethyan seaways. Almost all COI accumulated during the Paleogene relatively high stand of sea level, especially in Early and Middle Eocene time. As sea level fell gradually in Neogene time COI developed in only three marginal districts (including the giant Pliocene Kerch-Taman deposit in southeastern Ukraine). Sedimentary environment. Almost all of the COI developed in deltaic to shallow marine facies. These are commonly associated with shoaling-upward siliciclastic sequences; a few are in mixed siliciclastic-carbonate sequences. A few COI apparently occurred in fluvial and lacustrine facies; some of these may have been reworked from laterite or from marine ironstones. Sedimentary petrology. Many COI are less than a few tens of centimeters

  14. Cenozoic Tectonic Characteristics in the Adare Basin, West Ross Sea: Evidence From Seismic Profiles (United States)

    Zhang, Q.; Gao, J.; Ding, W.


    Based on the geophysical data obtained from the Adare Basin and its adjacent areas, West Ross Sea, the authors employed the frequency wave-number filtering technique to recover the newly processed dataset with high signal noise ratio and complete seismic event which highly contributes to reveal more detailed deep-seated geological structures than previously thought. The structural features and magmatism of the study area in Cenozoic were classified and analyzed. Combined with glaciation, the associated sedimentary facies were summarized systematically. The authors' analysis revealed that, at 16 Ma, under the influence of the thermal effect caused by residual magmatism and asymmetric spreading of Adare Basin in the initial period, surrounding areas of two flanks of the Adare trough were characterized by uplift folds and tilted uplift zone, respectively. The small-scale uplift fold zone was characterized by nearly upright faults and folds and was located in the southern part of the eastern flank, whereas the tilted uplift zone dominated in the corresponding district of western flank that reached the continental margin. By utilizing the contact relationship between igneous rocks and surrounding rocks, igneous rocks can be divided into two periods: early-stage and late Cenozoic igneous rocks. The early-stage rocks are generally located dispersedly in the tilted uplift zone and the age is poorly known. It is suggested that they were related to the residual magmatism. On the other hand, the spatial distribution of Late Cenozoic igneous rocks, formed not earlier 5.5 Ma, was extensive and scattered, almost covering the whole study area, which indicates that they might be unrelated to the rifting in space and time, instead they were affected by decompression melting of the mantle because of the large-scale deglaciation since Pliocene.

  15. Links between CO2, glaciation and water flow: reconciling the Cenozoic history of the Antarctic Circumpolar Current

    International Nuclear Information System (INIS)

    Ladant, J.B.; Donnadieu, Y.; Dumas, C.


    The timing of the onset of the Antarctic Circumpolar Current (ACC) is a crucial event of the Cenozoic because of its cooling and isolating effect over Antarctica. It is intimately related to the glaciations occurring throughout the Cenozoic from the Eocene - Oligocene (EO) transition (∼ 34 Ma) to the middle Miocene glaciations (∼ 13.9 Ma). However, the exact timing of the onset remains debated, with evidence for a late Eocene setup contradicting other data pointing to an occurrence closer to the Oligocene - Miocene (OM) boundary. In this study, we show the potential impact of the Antarctic ice sheet on the initiation of a strong proto- ACC at the EO boundary. Our results reveal that the regional cooling effect of the ice sheet increases sea ice formation, which disrupts the meridional density gradient in the Southern Ocean and leads to the onset of a circumpolar current and its progressive strengthening. We also suggest that subsequent variations in atmospheric CO 2 , ice sheet volumes and tectonic reorganizations may have affected the ACC intensity after the Eocene - Oligocene transition. This allows us to build a hypothesis for the Cenozoic evolution of the Antarctic Circumpolar Current that may provide an explanation for the second initiation of the ACC at the Oligocene - Miocene boundary while reconciling evidence supporting both early Oligocene and early Miocene onset of the ACC. (authors)

  16. Early Neolithic water wells reveal the world's oldest wood architecture. (United States)

    Tegel, Willy; Elburg, Rengert; Hakelberg, Dietrich; Stäuble, Harald; Büntgen, Ulf


    The European Neolithization ~6000-4000 BC represents a pivotal change in human history when farming spread and the mobile style of life of the hunter-foragers was superseded by the agrarian culture. Permanent settlement structures and agricultural production systems required fundamental innovations in technology, subsistence, and resource utilization. Motivation, course, and timing of this transformation, however, remain debatable. Here we present annually resolved and absolutely dated dendroarchaeological information from four wooden water wells of the early Neolithic period that were excavated in Eastern Germany. A total of 151 oak timbers preserved in a waterlogged environment were dated between 5469 and 5098 BC and reveal unexpectedly refined carpentry skills. The recently discovered water wells enable for the first time a detailed insight into the earliest wood architecture and display the technological capabilities of humans ~7000 years ago. The timbered well constructions made of old oak trees feature an unopened tree-ring archive from which annually resolved and absolutely dated environmental data can be culled. Our results question the principle of continuous evolutionary development in prehistoric technology, and contradict the common belief that metal was necessary for complex timber constructions. Early Neolithic craftsmanship now suggests that the first farmers were also the first carpenters.

  17. Early Neolithic water wells reveal the world's oldest wood architecture.

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    Willy Tegel

    Full Text Available The European Neolithization ~6000-4000 BC represents a pivotal change in human history when farming spread and the mobile style of life of the hunter-foragers was superseded by the agrarian culture. Permanent settlement structures and agricultural production systems required fundamental innovations in technology, subsistence, and resource utilization. Motivation, course, and timing of this transformation, however, remain debatable. Here we present annually resolved and absolutely dated dendroarchaeological information from four wooden water wells of the early Neolithic period that were excavated in Eastern Germany. A total of 151 oak timbers preserved in a waterlogged environment were dated between 5469 and 5098 BC and reveal unexpectedly refined carpentry skills. The recently discovered water wells enable for the first time a detailed insight into the earliest wood architecture and display the technological capabilities of humans ~7000 years ago. The timbered well constructions made of old oak trees feature an unopened tree-ring archive from which annually resolved and absolutely dated environmental data can be culled. Our results question the principle of continuous evolutionary development in prehistoric technology, and contradict the common belief that metal was necessary for complex timber constructions. Early Neolithic craftsmanship now suggests that the first farmers were also the first carpenters.

  18. Cenozoic deformation from the Yakutat-North American collision to the eastern margin of the Northern Canadian Cordillera (United States)

    Enkelmann, E.


    The western margin of the Northern Cordillera of North America is dominated by transform motion of the Yakutat microplate along the Fairweather fault system. In southeast Alaska the transform boundary changes to convergence and the oblique collision of the buoyant Yakutat microplate formed the St. Elias Mountains. One of the outstanding questions in understanding the St. Elias orogeny is how stress from the plate boundary has been transferred inboard and distributed strain in the North American plate. The timing, amount, and spatial pattern of deformation and rock exhumation have been studied using multiple thermochronology methods. Together the data reveal that Late Cenozoic deformation inboard of the Fairweather Fault and the colliding Yakutat plate corner at the St. Elias syntaxis was spatially very limited, resulting in rock exhumation within a cooling associated with Cordilleran deformation, and Paleocene-Eocene cooling due to spreading-ridge subduction. In contrast, the region west of the St. Elias syntaxis is dominated by convergence, which resulted in significant Cenozoic deformation in southeastern and southern Alaska. In the St. Elias orogen itself, most of the Late Cenozoic deformation and exhumation occurs within the Yakutat microplate and its Cenozoic sedimentary cover that composes the fold-thrust belt. The efficient interaction between tectonic uplift and glacial erosion resulted in rapid exhumation (>1 km/Myr) and extreme rates (4 km/Myr) that are localized at the syntaxis region and have shifted southward over the past 10 Myr. Far-field deformation reaches more than 500 km to the northwest of the convergent margin and caused mountain building in south-central Alaska. Deformation to the northeast is unclear. New thermochronology data from the eastern margin of the Northern Canadian Cordillera (Northwest Territory) reveal exhumation during the Oligocene to early Miocene. At this time, transform motion was already dominating the plate margin in the

  19. Comparative genomics of neuroglobin reveals its early origins.

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    Jasmin Dröge

    Full Text Available Neuroglobin (Ngb is a hexacoordinated globin expressed mainly in the central and peripheral nervous system of vertebrates. Although several hypotheses have been put forward regarding the role of neuroglobin, its definite function remains uncertain. Ngb appears to have a neuro-protective role enhancing cell viability under hypoxia and other types of oxidative stress. Ngb is phylogenetically ancient and has a substitution rate nearly four times lower than that of other vertebrate globins, e.g. hemoglobin. Despite its high sequence conservation among vertebrates Ngb seems to be elusive in invertebrates.We determined candidate orthologs in invertebrates and identified a globin of the placozoan Trichoplax adhaerens that is most likely orthologous to vertebrate Ngb and confirmed the orthologous relationship of the polymeric globin of the sea urchin Strongylocentrotus purpuratus to Ngb. The putative orthologous globin genes are located next to genes orthologous to vertebrate POMT2 similarly to localization of vertebrate Ngb. The shared syntenic position of the globins from Trichoplax, the sea urchin and of vertebrate Ngb strongly suggests that they are orthologous. A search for conserved transcription factor binding sites (TFBSs in the promoter regions of the Ngb genes of different vertebrates via phylogenetic footprinting revealed several TFBSs, which may contribute to the specific expression of Ngb, whereas a comparative analysis with myoglobin revealed several common TFBSs, suggestive of regulatory mechanisms common to globin genes.Identification of the placozoan and echinoderm genes orthologous to vertebrate neuroglobin strongly supports the hypothesis of the early evolutionary origin of this globin, as it shows that neuroglobin was already present in the placozoan-bilaterian last common ancestor. Computational determination of the transcription factor binding sites repertoire provides on the one hand a set of transcriptional factors that are

  20. Thermochronological Evidence for Cenozoic Segmentation of Transantarctic Mountains (United States)

    Zattin, M.; Pace, D.; Andreucci, B.; Rossetti, F.; Talarico, F.


    The Transantarctic Mountains (TAM) represent the boundary between the cratonic East Antarctica and the West Antarctica and are thus related to formation of the Western Antarctic Rift system (WARS). However, temporal relationships between timing of TAM uplift and evolution of the WARS are not clear. The large amount of existing thermochronological data indicate that exhumation of the TAM occurred at different times and extents, with main cooling events in the Early Cretaceous, Late Cretaceous, and early Cenozoic. Uplift of the different segments of the TAM was not recorded according to regular trends along the mountain chain, but instead appears diachronous and without a recognizable spatial pattern. Here we present apatite fission-track (AFT) data from 20 samples, collected from metamorphic and intrusive rocks from the region comprised between the Blue Glacier and the Byrd Glacier. AFT data show a large variety of ages, ranging from 28.0 to 88.8 Ma and without a clear correlation between age and elevation. As a whole, spatial variations suggest a decrease of ages from S to the region of the Koettlitz Glacier, where ages suddenly raise up to Cretaceous values. A marked increase of ages has been detected also south of Darwin Glacier, that is in correspondence of the Britannia Range. Thermal modelling shows that cooling paths are usually composite, with a main cooling event followed by slower cooling to present day temperatures. Time of main cooling event is late Cretaceous for samples from the Britannia Range whereas it is Eocene-Oligocene for samples from Koettlitz and Mulock areas. In any case, cooling rates are always quite low also during periods of enhanced uplift, with values not exceeding 5°C/Ma. These data support the idea of tectonic block segmentation of the TAM during the last phases of exhumation. Most of vertical displacements occurred during the Oligocene across transverse fault zones such as the Discovery Accommodation Zone to the north and the

  1. A synthesis of Cenozoic sedimentation in the North Sea

    DEFF Research Database (Denmark)

    Anell, Ingrid Anna Margareta; Thybo, Hans; Rasmussen, E.S.


    study provides a regional synthesis of sedimentation based on a comprehensive interpretation of a regionally covering reflection seismic data set. We relate observations of sediment characteristics and unconformities to the geological evolution. The timing, regional expression and stratigraphic...... characteristics of many unconformities indicate that they were generated by eustatic sea-level fall, often in conjunction with other processes. Early Cenozoic unconformities, however, relate to tectonism associated with the opening of the North Atlantic. From observation on a regional scale, we infer...

  2. Detrital zircon U-Pb geochronological and sedimentological study of the Simao Basin, Yunnan: Implications for the Early Cenozoic evolution of the Red River (United States)

    Chen, Yi; Yan, Maodu; Fang, Xiaomin; Song, Chunhui; Zhang, Weilin; Zan, Jinbo; Zhang, Zhiguo; Li, Bingshuai; Yang, Yongpeng; Zhang, Dawen


    The paleo-Red River is suggested to have been a continental-scale drainage system connecting the Tibetan Plateau to the South China Sea. However, the evolution of the paleo-Red River is still under debate. This study presents new results from sedimentological analyses and detrital zircon U-Pb geochronologic data from fluvial sedimentary rocks of Paleocene to Oligocene age of the Simao Basin to constrain the nature of the paleo-drainage system of the Red River. The detrital zircon U-Pb results reveal multiple age groups at 190-240 Ma, 260-280 Ma, 450-540 Ma, 1700-1900 Ma and 2400-2600 Ma for the Paleocene to late Eocene Denghei Formation (Fm.), but only one conspicuous peak at 220-240 Ma for the late Eocene-Oligocene Mengla Fm. Provenance analyses illustrate that the former likely had source areas that included the Hoh-Xil, Songpan-Ganzi, northern Qiangtang, Yidun and western Yangtze Terranes, which are consistent with the catchments of the Upper and Lower Jinshajiang Segments, whereas the latter mainly transported material from a limited number of sources, such as the Lincang granitic intrusions west of the Simao Basin. Integrated with available detrital zircon U-Pb geochronologic and paleogeographic data, our study suggests the existence of a paleo-Red River during the Paleocene to late Eocene that was truncated and lost its northern sources after approximately 35 Ma, due to left-lateral strike-slip faulting of the Ailao Shan-Red River and clockwise rotation of the Lanping-Simao Terrane.

  3. Analysing the Cenozoic depositional record

    DEFF Research Database (Denmark)

    Goledowski, Bartosz; Clausen, O.R.; Nielsen, S.B.


    It is well known that sediment deposition in the North Sea and on the Norwegian Shelf varied significantly during the Cenozoic as a consequence of varying erosion rate mainly in Western Scandinavia, in Scotland and in the Alps. Recent results have demonstrated that a causal relationship exists...... of variations in erosion rates. Here we present the rationale behind the project, the data available and some preliminary results. The dense seismic and well coverage in the area makes it possible to estimate the rate of deposition of matrix mass. Assuming that sediment storage is not important, this provides...... models. The matrix mass deposition history will be compared with the paleoclimate record (e.g. oxygen isotope curves) to see if the previously observed correlation in the eastern North Sea can be extended to other ages and locations.  ...

  4. The hand of birds revealed by early ostrich embryos (United States)

    Feduccia, Alan; Nowicki, Julie


    The problem of resolving the homology of the digits of the avian hand has been framed as a conflict between paleontological and embryological evidence, the former thought to support a hand composed of digits I, II, III, because of similarity of the phalangeal formulae of the earliest known bird Archaeopteryx to that of Mesozoic pentadactyl archosaurs, while embryological evidence has traditionally favored a II, III, IV avian hand. We have identified the critical developmental period for the major features of the avian skeleton in a primitive bird, the ostrich. Analysis of digit anlagen in the avian hand has revealed those for digits/metacarpals I and V, thus confirming previous embryological studies that indirectly suggested that the avian hand comprises digits II, III, IV, and was primitively pentadactyl.

  5. East African Cenozoic vegetation history. (United States)

    Linder, Hans Peter


    The modern vegetation of East Africa is a complex mosaic of rainforest patches; small islands of tropic-alpine vegetation; extensive savannas, ranging from almost pure grassland to wooded savannas; thickets; and montane grassland and forest. Here I trace the evolution of these vegetation types through the Cenozoic. Paleogene East Africa was most likely geomorphologically subdued and, as the few Eocene fossil sites suggest, a woodland in a seasonal climate. Woodland rather than rainforest may well have been the regional vegetation. Mountain building started with the Oligocene trap lava flows in Ethiopia, on which rainforest developed, with little evidence of grass and none of montane forests. The uplift of the East African Plateau took place during the middle Miocene. Fossil sites indicate the presence of rainforest, montane forest and thicket, and wooded grassland, often in close juxtaposition, from 17 to 10 Ma. By 10 Ma, marine deposits indicate extensive grassland in the region and isotope analysis indicates that this was a C 3 grassland. In the later Miocene rifting, first of the western Albertine Rift and then of the eastern Gregory Rift, added to the complexity of the environment. The building of the high strato-volcanos during the later Mio-Pliocene added environments suitable for tropic-alpine vegetation. During this time, the C 3 grassland was replaced by C 4 savannas, although overall the extent of grassland was reduced from the mid-Miocene high to the current low level. Lake-level fluctuations during the Quaternary indicate substantial variation in rainfall, presumably as a result of movements in the intertropical convergence zone and the Congo air boundary, but the impact of these fluctuations on the vegetation is still speculative. I argue that, overall, there was an increase in the complexity of East African vegetation complexity during the Neogene, largely as a result of orogeny. The impact of Quaternary climatic fluctuation is still poorly understood

  6. Cenozoic Methane-Seep Faunas of the Caribbean Region.

    Directory of Open Access Journals (Sweden)

    Steffen Kiel

    Full Text Available We report new examples of Cenozoic cold-seep communities from Colombia, Cuba, the Dominican Republic, Trinidad, and Venezuela, and attempt to improve the stratigraphic dating of Cenozoic Caribbean seep communities using strontium isotope stratigraphy. Two seep faunas are distinguished in Barbados: the late Eocene mudstone-hosted 'Joes River fauna' consists mainly of large lucinid bivalves and tall abyssochrysoid gastropods, and the early Miocene carbonate-hosted 'Bath Cliffs fauna' containing the vesicomyid Pleurophopsis, the mytilid Bathymodiolus and small gastropods. Two new Oligocene seep communities from the Sinú River basin in Colombia consist of lucinid bivalves including Elongatolucina, thyasirid and solemyid bivalves, and Pleurophopsis. A new early Miocene seep community from Cuba includes Pleurophopsis and the large lucinid Meganodontia. Strontium isotope stratigraphy suggests an Eocene age for the Cuban Elmira asphalt mine seep community, making it the oldest in the Caribbean region. A new basal Pliocene seep fauna from the Dominican Republic is characterized by the large lucinid Anodontia (Pegophysema. In Trinidad we distinguish two types of seep faunas: the mudstone-hosted Godineau River fauna consisting mainly of lucinid bivalves, and the limestone-hosted Freeman's Bay fauna consisting chiefly of Pleurophopsis, Bathymodiolus, and small gastropods; they are all dated as late Miocene. Four new seep communities of Oligocene to Miocene age are reported from Venezuela. They consist mainly of large globular lucinid bivalves including Meganodontia, and moderately sized vesicomyid bivalves. After the late Miocene many large and typical 'Cenozoic' lucinid genera disappeared from the Caribbean seeps and are today known only from the central Indo-Pacific Ocean. We speculate that the increasingly oligotrophic conditions in the Caribbean Sea after the closure of the Isthmus of Panama in the Pliocene may have been unfavorable for such large

  7. The gap in the Arctic Cenozoic Record: Expect the Unexpected (United States)

    Sangiorgi, F.; Brumsack, H.; Schouten, S.; Brinkhuis, H.; Kaminski, M. A.; Reichart, G.; Stickley, C. E.; Willard, D. A.; Sinninghe Damste', J. S.


    Integrated Ocean Drilling Program Expedition 302, a.k.a. the Arctic Coring Expedition (ACEX), drilled more than 400 meters below the seafloor at the central Lomonosov Ridge, ca 250 km from the modern North Pole in water depths of about 1300 m. The partially recovered sediments provide a unique record of the geological and paleoceanographical evolution of the Arctic Ocean during the Cenozoic. The record indicates a transition from a "greenhouse world", characterized by a relative shallow marine setting, with organic-rich sediment and frequent brackish or even fresh surface waters during the latest Palaeocene and the early Eocene, to an "icehouse world" of hemipelagic sedimentation affected by the occurrence of sea ice from the middle Miocene to present. Much to our surprise, these two states are separated by a major hiatus, not obvious from the seismic record and the lithology of the cores, spanning at least 25 Ma as derived from dinocyst and benthic foraminifer stratigraphies. These testify that deposits of probable late early Miocene age directly overlie early middle Eocene sediments. To unravel the nature of the hiatus, we performed a multiproxy micropaleontological and geochemical study on the surrounding record, i.e. lithological units 1/6, 1/5 and 1/4, where the sediment changes from homogeneous dark into a cm-scaled alternation ("zebra-like") black and grey bands to light grey, blue and reddish-brown. Paleoenvironmental reconstructions based on organic-walled dinoflagellate cysts, pollen and spores, benthic foraminifera, inorganic and organic geochemistry and siliceous remains reveal conspicuous changes, suggesting a transition from brackish-freshwater to shallow-lagoonal and to open marine environments. These environmental turnovers, coupled with the occurrence of such a large hiatus, cannot be due to climatic shifts alone, but suggest that major tectonic rearrangements likely changed the depositional setting. On-going organic geochemical analysis will be

  8. Cenozoic structures and the tectonic evolution of the eastern North Sea

    DEFF Research Database (Denmark)

    Clausen, O.R.; Nielsen, S.B.; Egholm, D.L.


    Abundant seismic sections and well data from the Cenozoic succession in the eastern North Sea area generally reveal normal faulting, salt tectonics and localized tectonic inversion. However, inferences on the Cenozoic dynamic evolution of the region require thorough analysis of interactions between...... or cover tectonism took place. Our objectives are thus 1) to analyze the interaction between basement and cover structures, and if possible 2) to relate the structures to the regional tectonic evolution. The Zechstein evaporites pinch out onto the Ringkøbing-Fyn High, which in the eastern North Sea...... influencede.g. Miocene deposition and controlled the generation of second order faults. The latter detached along the top Chalk Group due to the topography generated during faulting, i.e. they are second order detachment surfaces. We conclude that the regional tectonic significance of the Cenozoic structures...

  9. Cenozoic volcanic rocks of Saudi Arabia (United States)

    Coleman, R.G.; Gregory, R.T.; Brown, G.F.


    The Cenozoic volcanic rocks of Saudi Arabia cover about 90,000 km2, one of the largest areas of alkali olivine basalt in the world. These volcanic rocks are in 13 separate fields near the eastern coast of the Red Sea and in the western Arabian Peninsula highlands from Syria southward to the Yemen Arab Republic.

  10. A Cenozoic record of the equatorial Pacific carbonate compensation depth. (United States)

    Pälike, Heiko; Lyle, Mitchell W; Nishi, Hiroshi; Raffi, Isabella; Ridgwell, Andy; Gamage, Kusali; Klaus, Adam; Acton, Gary; Anderson, Louise; Backman, Jan; Baldauf, Jack; Beltran, Catherine; Bohaty, Steven M; Bown, Paul; Busch, William; Channell, Jim E T; Chun, Cecily O J; Delaney, Margaret; Dewangan, Pawan; Dunkley Jones, Tom; Edgar, Kirsty M; Evans, Helen; Fitch, Peter; Foster, Gavin L; Gussone, Nikolaus; Hasegawa, Hitoshi; Hathorne, Ed C; Hayashi, Hiroki; Herrle, Jens O; Holbourn, Ann; Hovan, Steve; Hyeong, Kiseong; Iijima, Koichi; Ito, Takashi; Kamikuri, Shin-ichi; Kimoto, Katsunori; Kuroda, Junichiro; Leon-Rodriguez, Lizette; Malinverno, Alberto; Moore, Ted C; Murphy, Brandon H; Murphy, Daniel P; Nakamura, Hideto; Ogane, Kaoru; Ohneiser, Christian; Richter, Carl; Robinson, Rebecca; Rohling, Eelco J; Romero, Oscar; Sawada, Ken; Scher, Howie; Schneider, Leah; Sluijs, Appy; Takata, Hiroyuki; Tian, Jun; Tsujimoto, Akira; Wade, Bridget S; Westerhold, Thomas; Wilkens, Roy; Williams, Trevor; Wilson, Paul A; Yamamoto, Yuhji; Yamamoto, Shinya; Yamazaki, Toshitsugu; Zeebe, Richard E


    Atmospheric carbon dioxide concentrations and climate are regulated on geological timescales by the balance between carbon input from volcanic and metamorphic outgassing and its removal by weathering feedbacks; these feedbacks involve the erosion of silicate rocks and organic-carbon-bearing rocks. The integrated effect of these processes is reflected in the calcium carbonate compensation depth, which is the oceanic depth at which calcium carbonate is dissolved. Here we present a carbonate accumulation record that covers the past 53 million years from a depth transect in the equatorial Pacific Ocean. The carbonate compensation depth tracks long-term ocean cooling, deepening from 3.0-3.5 kilometres during the early Cenozoic (approximately 55 million years ago) to 4.6 kilometres at present, consistent with an overall Cenozoic increase in weathering. We find large superimposed fluctuations in carbonate compensation depth during the middle and late Eocene. Using Earth system models, we identify changes in weathering and the mode of organic-carbon delivery as two key processes to explain these large-scale Eocene fluctuations of the carbonate compensation depth.

  11. Cenozoic uplift of the Tibetan Plateau: Evidence from the tectonic–sedimentary evolution of the western Qaidam Basin

    Directory of Open Access Journals (Sweden)

    Yadong Wang


    Full Text Available Geologists agree that the collision of the Indian and Asian plates caused uplift of the Tibet Plateau. However, controversy still exists regarding the modes and mechanisms of the Tibetan Plateau uplift. Geology has recorded this uplift well in the Qaidam Basin. This paper analyzes the tectonic and sedimentary evolution of the western Qaidam Basin using sub-surface seismic and drill data. The Cenozoic intensity and history of deformation in the Qaidam Basin have been reconstructed based on the tectonic developments, faults growth index, sedimentary facies variations, and the migration of the depositional depressions. The changes in the sedimentary facies show that lakes in the western Qaidam Basin had gone from inflow to still water deposition to withdrawal. Tectonic movements controlled deposition in various depressions, and the depressions gradually shifted southeastward. In addition, the morphology of the surface structures in the western Qaidam Basin shows that the Cenozoic tectonic movements controlled the evolution of the Basin and divided it into (a the southern fault terrace zone, (b a central Yingxiongling orogenic belt, and (c the northern fold-thrust belt; divided by the XI fault (Youshi fault and Youbei fault, respectively. The field data indicate that the western Qaidam Basin formed in a Cenozoic compressive tectonic environment caused by the India–Asia plate collision. Further, the Basin experienced two phases of intensive tectonic deformation. The first phase occurred during the Middle Eocene–Early Miocene (Xia Ganchaigou Fm. and Shang Ganchaigou Fm., 43.8–22 Ma, and peaked in the Early Oligocene (Upper Xia Ganchaigou Fm., 31.5 Ma. The second phase occurred between the Middle Miocene and the Present (Shang Youshashan Fm. and Qigequan Fm., 14.9–0 Ma, and was stronger than the first phase. The tectonic–sedimentary evolution and the orientation of surface structures in the western Qaidam Basin resulted from the Tibetan


    Directory of Open Access Journals (Sweden)

    Viktor D. Mats


    Full Text Available The late Cretaceous-Cenozoic sediments of fossil soils and weathering crusts of the Baikal rift have been subject to long-term studies. Based on our research results, it is possible to distinguish the following litho-stratigraphic complexes which are related to particular stages of the rift development: the late Cretaceous–early Oligocene (crypto-rift Arheo-baikalian, the late Oligocene–early Pliocene (ecto-rift early orogenic Pra-baikalian, and the late Pliocene-Quaternary (ecto-rift late orogenic Pra-baikalian – Baikalian complexes. Changes of weathering modes (Cretaceous-quarter, soil formation (Miocene-quarter and differences of precipitation by vertical and lateral stratigraphy are analysed with regard to specific features of climate, tectonics and facial conditions of sedimentation. Tectonic phases are defined in the Cenozoic period of the Pribaikalie.

  13. Cenozoic basin thermal history reconstruction and petroleum systems in the eastern Colombian Andes (United States)

    Parra, Mauricio; Mora, Andres; Ketcham, Richard A.; Stockli, Daniel F.; Almendral, Ariel


    Late Mesozoic-Cenozoic retro-arc foreland basins along the eastern margin of the Andes in South America host the world's best detrital record for the study of subduction orogenesis. There, the world's most prolific petroleum system occur in the northernmost of these foreland basin systems, in Ecuador, Colombia and Venezuela, yet over 90% of the discovered hydrocarbons there occur in one single province in norteastern Venezuela. A successful industry-academy collaboration applied a multidisciplinary approach to the study of the north Andes with the aim of investigating both, the driving mechanisms of orogenesis, and its impact on hydrocarbon accumulation in eastern Colombia. The Eastern Cordillera is an inversion orogen located at the leading edge of the northern Andes. Syn-rift subsidence favored the accumulation of km-thick organic matter rich shales in a back-arc basin in the early Cretaceous. Subsequent late Cretaceous thermal subsidence prompted the accumulation of shallow marine sandstones and shales, the latter including the Turonian-Cenomanian main hydrocarbon source-rock. Early Andean uplift since the Paleocene led to development of a flexural basin, filled with mainly non-marine strata. We have studied the Meso-Cenozoic thermal evolution of these basins through modeling of a large thermochronometric database including hundreds of apatite and zircon fission-track and (U-Th)/He data, as well as paleothermometric information based on vitrinite reflectance and present-day temperatures measured in boreholes. The detrital record of Andean construction was also investigated through detrital zircon U-Pb geochronometry in outcrop and borehole samples. A comprehensive burial/exhumation history has been accomplished through three main modeling strategies. First, one-dimensional subsidence was used to invert the pre-extensional lithospheric thicknesses, the magnitude of stretching, and the resulting heat flow associated to extension. The amount of eroded section and

  14. Mesozoic and Cenozoic uplift and exhumation of the Bogda Mountain, NW China: Evidence from apatite fission track analysis

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    Wenhao Tang


    Full Text Available Apatite fission track (AFT analysis on samples collected from a Paleozoic series is used to constrain the cooling history of the Bogda Mountain, northwest China. AFT ages range from 136.2 to 85.6 Ma and are younger than rock depositional ages and the mean confined track lengths (11.0–13.2 μm mostly showing unimodal distribution are shorten, indicating significant track-annealing. Thermal histories modeling based on the distribution of fission-track lengths combined with the regional geological data show that two rapid cooling phases occurred in the latest Jurassic–early Cretaceous and the Oligocene–Miocene. Those new data together with previous published data show that the AFT ages become younger from the southwest to northeast in the western Bogda Mountain and its adjacent areas. The fission-track ages of the southwest area are relatively older (>100 Ma, recording the earlier rapid uplift phase during the late Jurassic–Cretaceous, while the ages in the north piedmont of the Bogda Mountain (namely the northeast part are younger (<60 Ma, mainly reflecting the later rapid uplift phase in the Oligocene–Miocene. The trend of younger AFT ages towards the northeast might be explained by post-Cretaceous large-scale crustal tilting towards the southwest. In the thrust fault-dominated northern limbs of the Bogda Mountain, AFT ages reveal a discontinuous pattern with age-jumps across the major fault zones, showing a possible strata tilting across each thrust faults due to the thrust ramps during the Cenozoic. The two rapid uplift stages might be related to the accretion and collision in the southern margin of the Asian continent during the late Jurassic and late Cenozoic, respectively.

  15. Quantitative Tissue Proteomics Analysis Reveals Versican as Potential Biomarker for Early-Stage Hepatocellular Carcinoma. (United States)

    Naboulsi, Wael; Megger, Dominik A; Bracht, Thilo; Kohl, Michael; Turewicz, Michael; Eisenacher, Martin; Voss, Don Marvin; Schlaak, Jörg F; Hoffmann, Andreas-Claudius; Weber, Frank; Baba, Hideo A; Meyer, Helmut E; Sitek, Barbara


    Hepatocellular carcinoma (HCC) is one of the most aggressive tumors, and the treatment outcome of this disease is improved when the cancer is diagnosed at an early stage. This requires biomarkers allowing an accurate and early tumor diagnosis. To identify potential markers for such applications, we analyzed a patient cohort consisting of 50 patients (50 HCC and 50 adjacent nontumorous tissue samples as controls) using two independent proteomics approaches. We performed label-free discovery analysis on 19 HCC and corresponding tissue samples. The data were analyzed considering events known to take place in early events of HCC development, such as abnormal regulation of Wnt/b-catenin and activation of receptor tyrosine kinases (RTKs). 31 proteins were selected for verification experiments. For this analysis, the second set of the patient cohort (31 HCC and corresponding tissue samples) was analyzed using selected (multiple) reaction monitoring (SRM/MRM). We present the overexpression of ATP-dependent RNA helicase (DDX39), Fibulin-5 (FBLN5), myristoylated alanine-rich C-kinase substrate (MARCKS), and Serpin H1 (SERPINH1) in HCC for the first time. We demonstrate Versican core protein (VCAN) to be significantly associated with well differentiated and low-stage HCC. We revealed for the first time the evidence of VCAN as a potential biomarker for early-HCC diagnosis.

  16. Climate vs. tectonic induced variations in Cenozoic sediment supply from western Scandinavia

    DEFF Research Database (Denmark)

    Gołędowski, Bartosz; Nielsen, S.B.; Clausen, O.R.

    The scope of this work is the causality of sediment flux variations from western Scandinavia during the Cenozoic. Over the decades of exploration in the North Sea and in the Norwegian shelf most of these variations were given tectonic causes. During the final period of North Atlantic break......-up (Paleocene-Early Eocene) this link is quite striking, especially in the northern British Isles and in the Faeroe-Shetland Platform where sediment production pulses can be correlated with well documented periods of tectonic activity (e.g. magmatism). However, during the subsequent Cenozoic epochs this link...... is much less constrained. For this period we therefore search for an alternative explanation in terms of climate and climate change [1-3] Methods The extensive seismic and well data set allow investigation of inland erosion rates via the offshore distribution of sediments. However, varying marine...

  17. Cenozoic plant diversity of Yunnan: A review

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    Yongjiang Huang


    Full Text Available Yunnan in southwestern China is renowned for its high plant diversity. To understand how this modern botanical richness formed, it is critical to investigate the past biodiversity throughout the geological time. In this review, we present a summary on plant diversity, floristics and climates in the Cenozoic of Yunnan and document their changes, by compiling published palaeobotanical sources. Our review demonstrates that thus far a total of 386 fossil species of ferns, gymnosperms and angiosperms belonging to 170 genera within 66 families have been reported from the Cenozoic, particularly the Neogene, of Yunnan. Angiosperms display the highest richness represented by 353 species grouped into 155 genera within 60 families, with Fagaceae, Fabaceae, Lauraceae and Juglandaceae being the most diversified. Most of the families and genera recorded as fossils still occur in Yunnan, but seven genera have disappeared, including Berryophyllum, Cedrelospermum, Cedrus, Palaeocarya, Podocarpium, Sequoia and Wataria. The regional extinction of these genera is commonly referred to an aridification of the dry season associated with Asian monsoon development. Floristic analyses indicate that in the late Miocene, Yunnan had three floristic regions: a northern subtropical floristic region in the northeast, a subtropical floristic region in the east, and a tropical floristic region in the southwest. In the late Pliocene, Yunnan saw two kinds of floristic regions: a subalpine floristic region in the northwest, and two subtropical floristic regions separately in the southwest and the eastern center. These floristic concepts are verified by results from our areal type analyses which suggest that in the Miocene southwestern Yunnan supported the most Pantropic elements, while in the Pliocene southwestern Yunnan had abundant Tropical Asia (Indo–Malaysia type and East Asia and North America disjunct type that were absent from northwestern Yunnan. From the late Miocene to

  18. Late Cenozoic fluvial successions in northern and western India: an overview and synthesis (United States)

    Sinha, R.; Kumar, R.; Sinha, S.; Tandon, S. K.; Gibling, M. R.


    Late Cenozoic fluvial successions are widespread in India. They include the deposits of the Siwalik basin which represent the accumulations of the ancient river systems of the Himalayan foreland basin. Palaeomagnetic studies reveal that fluvial architecture and styles of deposition were controlled by Himalayan tectonics as well as by major climatic fluctuations during the long (∼13 Ma) span of formation. The Indo-Gangetic plains form the world's most extensive Quaternary alluvial plains, and display spatially variable controls on sedimentation: Himalayan tectonics in the frontal parts, climate in the middle reaches, and eustasy in the lower reaches close to the Ganga-Brahmaputra delta. Climatic effects were mediated by strong fluctuations in the SW Indian Monsoon, and Himalayan rivers occupy deep valleys in the western Ganga plains where stream power is high, cut in part during early Holocene monsoon intensification; the broad interfluves record the simultaneous aggradation of plains-fed rivers since ∼100 ka. The eastward increase in precipitation across the Ganga Plains results in rivers with low stream power and a very high sediment flux, resulting in an aggradational mode and little incision. The river deposits of semi-arid to arid western India form important archives of Quaternary climate change through their intercalation with the eolian deposits of the Thar Desert. Although the synthesis documents strong variability-both spatial and temporal-in fluvial stratigraphy, climatic events such as the decline in precipitation during the Last Glacial Maximum and monsoon intensification in the early Holocene have influenced fluvial dynamics throughout the region.

  19. EEG reveals an early influence of social conformity on visual processing in group pressure situations. (United States)

    Trautmann-Lengsfeld, Sina Alexa; Herrmann, Christoph Siegfried


    Humans are social beings and often have to perceive and perform within groups. In conflict situations, this puts them under pressure to either adhere to the group opinion or to risk controversy with the group. Psychological experiments have demonstrated that study participants adapt to erroneous group opinions in visual perception tasks, which they can easily solve correctly when performing on their own. Until this point, however, it is unclear whether this phenomenon of social conformity influences early stages of perception that might not even reach awareness or later stages of conscious decision-making. Using electroencephalography, this study has revealed that social conformity to the wrong group opinion resulted in a decrease of the posterior-lateral P1 in line with a decrease of the later centro-parietal P3. These results suggest that group pressure situations impact early unconscious visual perceptual processing, which results in a later diminished stimulus discrimination and an adaptation even to the wrong group opinion. These findings might have important implications for understanding social behavior in group settings and are discussed within the framework of social influence on eyewitness testimony.

  20. Cenozoic stratigraphy and structure of the Chesapeake Bay region (United States)

    Powars, David S.; Edwards, Lucy E.; Kidwell, Susan M.; Schindler, J. Stephen


    The Salisbury embayment is a broad tectonic downwarp that is filled by generally seaward-thickening, wedge-shaped deposits of the central Atlantic Coastal Plain. Our two-day field trip will take us to the western side of this embayment from the Fall Zone in Washington, D.C., to some of the bluffs along Aquia Creek and the Potomac River in Virginia, and then to the Calvert Cliffs on the western shore of the Chesapeake Bay. We will see fluvial-deltaic Cretaceous deposits of the Potomac Formation. We will then focus on Cenozoic marine deposits. Transgressive and highstand deposits are stacked upon each other with unconformities separating them; rarely are regressive or lowstand deposits preserved. The Paleocene and Eocene shallow shelf deposits consist of glauconitic, silty sands that contain varying amounts of marine shells. The Miocene shallow shelf deposits consist of diatomaceous silts and silty and shelly sands. The lithology, thickness, dip, preservation, and distribution of the succession of coastal plain sediments that were deposited in our field-trip area are, to a great extent, structurally controlled. Surficial and subsurface mapping using numerous continuous cores, auger holes, water-well data, and seismic surveys has documented some folds and numerous high-angle reverse and normal faults that offset Cretaceous and Cenozoic deposits. Many of these structures are rooted in early Mesozoic and/or Paleozoic NE-trending regional tectonic fault systems that underlie the Atlantic Coastal Plain. On Day 1, we will focus on two fault systems (stops 1–2; Stafford fault system and the Skinkers Neck–Brandywine fault system and their constituent fault zones and faults). We will then see (stops 3–5) a few of the remaining exposures of largely unlithified marine Paleocene and Eocene strata along the Virginia side of the Potomac River including the Paleocene-Eocene Thermal Maximum boundary clay. These exposures are capped by fluvial-estuarine Pleistocene terrace

  1. Mid Cenozoic freshwater wetlands of the Sunda region

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    Robert J. Morley


    Full Text Available The Sunda region was the scene of widespread rifting during the mid-Cenozoic, resulting in the development of numerous large lake-filled rifts, analogous in scale to the rift valley system of East Africa. The Tonle Sap in Cambodia forms the closest modern analogue for these lakes in the Southeast Asian region. Many of the palaeolakes were long lived, continuing uninterrupted as open lakes for several millions of years during the Oligocene. Smaller rift systems infilled with fluvial sediments, but the larger ones remained as lakes, and with Late Oligocene subsidence, were transformed by brackish, and in the earliest Miocene, by marine incursion, into large inland seas. These seas reached their greatest extent at the time of the mid Miocene thermal maximum. This paper describes the development and eventual demise of these lakes following marine transgression, and, based on their rich content of pollen and spores, illustrates the variety of fresh and brackish water swamp communities which developed around their margins. The marginal swamps can be divided into: i seasonally inundated swamps, mainly during the Oligocene, characterised by Barringtonia, Lagerstroemia and grasses/sedges; ii fern swamps and iii from the Late Oligocene onward alluvial swamps, often characterised by Pandanus; and iv peat swamps. The latter can be differentiated into kerapah peat swamps, first occurring during the Oligocene, and basinal peat swamps, becoming widespread from the Early Miocene onward.

  2. Changing provenance of late Cenozoic sediments in the Jianghan Basin

    Directory of Open Access Journals (Sweden)

    Lei Shao


    Full Text Available The Yangtze River is one of the most important components of the East Asia river system. In this study, sediments in the Jianghan Basin, middle Yangtze River, were selected for trace element and rare earth element (REE measurements, in order to decipher information on the change of sediment provenance and evolution of the Yangtze River. According to the elemental variations, the late Cenozoic sediments of the Jianghan Basin could be divided into four parts. During 2.68–2.28 Ma and 1.25–0 Ma, provenance of the sediments was consistent, whereas sediments were derived from variable sources during 2.28–1.25 Ma. Comparison of the elemental compositions between the Pliocene and Quaternary sediments revealed a change in sediment source from a more felsic source area to a more basic source area around the Pliocene–Quaternary boundary. Input from the Emeishan LIP should account for this provenance change. Based on the provenance analysis of sediments in the Jianghan Basin, we infer that the Yangtze River developed into a large river with its drainage basin extended to the Emeishan LIP no later than the Pliocene–Quaternary boundary.

  3. A short-time scale colloidal system reveals early bacterial adhesion dynamics.

    Directory of Open Access Journals (Sweden)

    Christophe Beloin


    Full Text Available The development of bacteria on abiotic surfaces has important public health and sanitary consequences. However, despite several decades of study of bacterial adhesion to inert surfaces, the biophysical mechanisms governing this process remain poorly understood, due, in particular, to the lack of methodologies covering the appropriate time scale. Using micrometric colloidal surface particles and flow cytometry analysis, we developed a rapid multiparametric approach to studying early events in adhesion of the bacterium Escherichia coli. This approach simultaneously describes the kinetics and amplitude of early steps in adhesion, changes in physicochemical surface properties within the first few seconds of adhesion, and the self-association state of attached and free-floating cells. Examination of the role of three well-characterized E. coli surface adhesion factors upon attachment to colloidal surfaces--curli fimbriae, F-conjugative pilus, and Ag43 adhesin--showed clear-cut differences in the very initial phases of surface colonization for cell-bearing surface structures, all known to promote biofilm development. Our multiparametric analysis revealed a correlation in the adhesion phase with cell-to-cell aggregation properties and demonstrated that this phenomenon amplified surface colonization once initial cell-surface attachment was achieved. Monitoring of real-time physico-chemical particle surface properties showed that surface-active molecules of bacterial origin quickly modified surface properties, providing new insight into the intricate relations connecting abiotic surface physicochemical properties and bacterial adhesion. Hence, the biophysical analytical method described here provides a new and relevant approach to quantitatively and kinetically investigating bacterial adhesion and biofilm development.

  4. Cenozoic planktonic marine diatom diversity and correlation to climate change (United States)

    Lazarus, David; Barron, John; Renaudie, Johan; Diver, Patrick; Türke, Andreas


    Marine planktonic diatoms export carbon to the deep ocean, playing a key role in the global carbon cycle. Although commonly thought to have diversified over the Cenozoic as global oceans cooled, only two conflicting quantitative reconstructions exist, both from the Neptune deep-sea microfossil occurrences database. Total diversity shows Cenozoic increase but is sample size biased; conventional subsampling shows little net change. We calculate diversity from a separately compiled new diatom species range catalog, and recalculate Neptune subsampled-in-bin diversity using new methods to correct for increasing Cenozoic geographic endemism and decreasing Cenozoic evenness. We find coherent, substantial Cenozoic diversification in both datasets. Many living cold water species, including species important for export productivity, originate only in the latest Miocene or younger. We make a first quantitative comparison of diatom diversity to the global Cenozoic benthic ∂18O (climate) and carbon cycle records (∂13C, and 20-0 Ma pCO2). Warmer climates are strongly correlated with lower diatom diversity (raw: rho = .92, p2 were only moderately higher than today. Diversity is strongly correlated to both ∂13C and pCO2 over the last 15 my (for both: r>.9, detrended r>.6, all p<.001), but only weakly over the earlier Cenozoic, suggesting increasingly strong linkage of diatom and climate evolution in the Neogene. Our results suggest that many living marine planktonic diatom species may be at risk of extinction in future warm oceans, with an unknown but potentially substantial negative impact on the ocean biologic pump and oceanic carbon sequestration. We cannot however extrapolate our my-scale correlations with generic climate proxies to anthropogenic time-scales of warming without additional species-specific information on proximate ecologic controls.

  5. Cenozoic planktonic marine diatom diversity and correlation to climate change.

    Directory of Open Access Journals (Sweden)

    David Lazarus

    Full Text Available Marine planktonic diatoms export carbon to the deep ocean, playing a key role in the global carbon cycle. Although commonly thought to have diversified over the Cenozoic as global oceans cooled, only two conflicting quantitative reconstructions exist, both from the Neptune deep-sea microfossil occurrences database. Total diversity shows Cenozoic increase but is sample size biased; conventional subsampling shows little net change. We calculate diversity from a separately compiled new diatom species range catalog, and recalculate Neptune subsampled-in-bin diversity using new methods to correct for increasing Cenozoic geographic endemism and decreasing Cenozoic evenness. We find coherent, substantial Cenozoic diversification in both datasets. Many living cold water species, including species important for export productivity, originate only in the latest Miocene or younger. We make a first quantitative comparison of diatom diversity to the global Cenozoic benthic ∂(18O (climate and carbon cycle records (∂(13C, and 20-0 Ma pCO2. Warmer climates are strongly correlated with lower diatom diversity (raw: rho = .92, p.9, detrended r>.6, all p<.001, but only weakly over the earlier Cenozoic, suggesting increasingly strong linkage of diatom and climate evolution in the Neogene. Our results suggest that many living marine planktonic diatom species may be at risk of extinction in future warm oceans, with an unknown but potentially substantial negative impact on the ocean biologic pump and oceanic carbon sequestration. We cannot however extrapolate our my-scale correlations with generic climate proxies to anthropogenic time-scales of warming without additional species-specific information on proximate ecologic controls.

  6. Active nuclear transcriptome analysis reveals inflammasome-dependent mechanism for early neutrophil response to Mycobacterium marinum. (United States)

    Kenyon, Amy; Gavriouchkina, Daria; Zorman, Jernej; Napolitani, Giorgio; Cerundolo, Vincenzo; Sauka-Spengler, Tatjana


    The mechanisms governing neutrophil response to Mycobacterium tuberculosis remain poorly understood. In this study we utilise biotagging, a novel genome-wide profiling approach based on cell type-specific in vivo biotinylation in zebrafish to analyse the initial response of neutrophils to Mycobacterium marinum, a close genetic relative of M. tuberculosis used to model tuberculosis. Differential expression analysis following nuclear RNA-seq of neutrophil active transcriptomes reveals a significant upregulation in both damage-sensing and effector components of the inflammasome, including caspase b, NLRC3 ortholog (wu: fb15h11) and il1β. Crispr/Cas9-mediated knockout of caspase b, which acts by proteolytic processing of il1β, results in increased bacterial burden and less infiltration of macrophages to sites of mycobacterial infection, thus impairing granuloma development. We also show that a number of immediate early response genes (IEGs) are responsible for orchestrating the initial neutrophil response to mycobacterial infection. Further perturbation of the IEGs exposes egr3 as a key transcriptional regulator controlling il1β transcription.

  7. MMP-13 In-Vivo Molecular Imaging Reveals Early Expression in Lung Adenocarcinoma.

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    Mathieu Salaün

    Full Text Available Several matrix metalloproteinases (MMPs are overexpressed in lung cancer and may serve as potential targets for the development of bioactivable probes for molecular imaging.To characterize and monitor the activity of MMPs during the progression of lung adenocarcinoma.K-rasLSL-G12D mice were imaged serially during the development of adenocarcinomas using fluorescence molecular tomography (FMT and a probe specific for MMP-2, -3, -9 and -13. Lung tumors were identified using FMT and MRI co-registration, and the probe concentration in each tumor was assessed at each time-point. The expression of Mmp2, -3, -9, -13 was quantified by qRT-PCR using RNA isolated from microdissected tumor cells. Immunohistochemical staining of overexpressed MMPs in animals was assessed on human lung tumors.In mice, 7 adenomas and 5 adenocarcinomas showed an increase in fluorescent signal on successive FMT scans, starting between weeks 4 and 8. qRT-PCR assays revealed significant overexpression of only Mmp-13 in mice lung tumors. In human tumors, a high MMP-13 immunostaining index was found in tumor cells from invasive lesions (24/27, but in none of the non-invasive (0/4 (p=0.001.MMP-13 is detected in early pulmonary invasive adenocarcinomas and may be a potential target for molecular imaging of lung cancer.

  8. MMP-13 In-Vivo Molecular Imaging Reveals Early Expression in Lung Adenocarcinoma (United States)

    Salaün, Mathieu; Peng, Jing; Hensley, Harvey H.; Roder, Navid; Flieder, Douglas B.; Houlle-Crépin, Solène; Abramovici-Roels, Olivia; Sabourin, Jean-Christophe; Thiberville, Luc; Clapper, Margie L.


    Introduction Several matrix metalloproteinases (MMPs) are overexpressed in lung cancer and may serve as potential targets for the development of bioactivable probes for molecular imaging. Objective To characterize and monitor the activity of MMPs during the progression of lung adenocarcinoma. Methods K-rasLSL-G12D mice were imaged serially during the development of adenocarcinomas using fluorescence molecular tomography (FMT) and a probe specific for MMP-2, -3, -9 and -13. Lung tumors were identified using FMT and MRI co-registration, and the probe concentration in each tumor was assessed at each time-point. The expression of Mmp2, -3, -9, -13 was quantified by qRT-PCR using RNA isolated from microdissected tumor cells. Immunohistochemical staining of overexpressed MMPs in animals was assessed on human lung tumors. Results In mice, 7 adenomas and 5 adenocarcinomas showed an increase in fluorescent signal on successive FMT scans, starting between weeks 4 and 8. qRT-PCR assays revealed significant overexpression of only Mmp-13 in mice lung tumors. In human tumors, a high MMP-13 immunostaining index was found in tumor cells from invasive lesions (24/27), but in none of the non-invasive (0/4) (p=0.001). Conclusion MMP-13 is detected in early pulmonary invasive adenocarcinomas and may be a potential target for molecular imaging of lung cancer. PMID:26193700

  9. Ancient DNA from European Early Neolithic Farmers Reveals Their Near Eastern Affinities (United States)

    Haak, Wolfgang; Balanovsky, Oleg; Sanchez, Juan J.; Koshel, Sergey; Zaporozhchenko, Valery; Adler, Christina J.; Der Sarkissian, Clio S. I.; Brandt, Guido; Schwarz, Carolin; Nicklisch, Nicole; Dresely, Veit; Fritsch, Barbara; Balanovska, Elena; Villems, Richard; Meller, Harald; Alt, Kurt W.; Cooper, Alan


    In Europe, the Neolithic transition (8,000–4,000 b.c.) from hunting and gathering to agricultural communities was one of the most important demographic events since the initial peopling of Europe by anatomically modern humans in the Upper Paleolithic (40,000 b.c.). However, the nature and speed of this transition is a matter of continuing scientific debate in archaeology, anthropology, and human population genetics. To date, inferences about the genetic make up of past populations have mostly been drawn from studies of modern-day Eurasian populations, but increasingly ancient DNA studies offer a direct view of the genetic past. We genetically characterized a population of the earliest farming culture in Central Europe, the Linear Pottery Culture (LBK; 5,500–4,900 calibrated b.c.) and used comprehensive phylogeographic and population genetic analyses to locate its origins within the broader Eurasian region, and to trace potential dispersal routes into Europe. We cloned and sequenced the mitochondrial hypervariable segment I and designed two powerful SNP multiplex PCR systems to generate new mitochondrial and Y-chromosomal data from 21 individuals from a complete LBK graveyard at Derenburg Meerenstieg II in Germany. These results considerably extend the available genetic dataset for the LBK (n = 42) and permit the first detailed genetic analysis of the earliest Neolithic culture in Central Europe (5,500–4,900 calibrated b.c.). We characterized the Neolithic mitochondrial DNA sequence diversity and geographical affinities of the early farmers using a large database of extant Western Eurasian populations (n = 23,394) and a wide range of population genetic analyses including shared haplotype analyses, principal component analyses, multidimensional scaling, geographic mapping of genetic distances, and Bayesian Serial Simcoal analyses. The results reveal that the LBK population shared an affinity with the modern-day Near East and Anatolia, supporting a major

  10. Ancient DNA from European early neolithic farmers reveals their near eastern affinities.

    Directory of Open Access Journals (Sweden)

    Wolfgang Haak

    Full Text Available In Europe, the Neolithic transition (8,000-4,000 B.C. from hunting and gathering to agricultural communities was one of the most important demographic events since the initial peopling of Europe by anatomically modern humans in the Upper Paleolithic (40,000 B.C.. However, the nature and speed of this transition is a matter of continuing scientific debate in archaeology, anthropology, and human population genetics. To date, inferences about the genetic make up of past populations have mostly been drawn from studies of modern-day Eurasian populations, but increasingly ancient DNA studies offer a direct view of the genetic past. We genetically characterized a population of the earliest farming culture in Central Europe, the Linear Pottery Culture (LBK; 5,500-4,900 calibrated B.C. and used comprehensive phylogeographic and population genetic analyses to locate its origins within the broader Eurasian region, and to trace potential dispersal routes into Europe. We cloned and sequenced the mitochondrial hypervariable segment I and designed two powerful SNP multiplex PCR systems to generate new mitochondrial and Y-chromosomal data from 21 individuals from a complete LBK graveyard at Derenburg Meerenstieg II in Germany. These results considerably extend the available genetic dataset for the LBK (n = 42 and permit the first detailed genetic analysis of the earliest Neolithic culture in Central Europe (5,500-4,900 calibrated B.C.. We characterized the Neolithic mitochondrial DNA sequence diversity and geographical affinities of the early farmers using a large database of extant Western Eurasian populations (n = 23,394 and a wide range of population genetic analyses including shared haplotype analyses, principal component analyses, multidimensional scaling, geographic mapping of genetic distances, and Bayesian Serial Simcoal analyses. The results reveal that the LBK population shared an affinity with the modern-day Near East and Anatolia, supporting

  11. The impacts of Cenozoic climate and habitat changes on small mammal diversity of North America (United States)

    Samuels, Joshua X.; Hopkins, Samantha S. B.


    Through the Cenozoic, paleoclimate records show general trends of global cooling and increased aridity, and environments in North America shifted from predominantly forests to more open habitats. Paleobotanical records indicate grasses were present on the continent in the Eocene; however, paleosol and phytolith studies indicate that open habitats did not arise until the late Eocene or even later in the Oligocene. Studies of large mammalian herbivores have documented changes in ecomorphology and community structure through time, revealing that shifts in mammalian morphology occurred millions of years after the environmental changes thought to have triggered them. Smaller mammals, like rodents and lagomorphs, should more closely track climate and habitat changes due to their shorter generation times and smaller ranges, but these animals have received much less study. To examine changes in smaller mammals through time, we have assembled and analyzed an ecomorphological database of all North American rodent and lagomorph species. Analyses of these data found that rodent and lagomorph community structure changed dramatically through the Cenozoic, and shifts in diversity and ecology correspond closely with the timing of habitat changes. Cenozoic rodent and lagomorph species diversity is strongly biased by sampling of localities, but sampling-corrected diversity reveals diversity dynamics that, after an initial density-dependent diversification in the Eocene, track habitat changes and the appearance of new ecological adaptations. As habitats became more open and arid through time, rodent and lagomorph crown heights increased while burrowing, jumping, and cursorial adaptations became more prevalent. Through time, open-habitat specialists were added during periods of diversification, while closed-habitat taxa were disproportionately lost in subsequent diversity declines. While shifts among rodents and lagomorphs parallel changes in ungulate communities, they started

  12. Early herding practices revealed through organic residue analysis of pottery from the early Neolithic rock shelter of Mala Triglavca, Slovenia

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    Lucija Šoberl


    Full Text Available A collection of pottery from the early Neolithic site of Mala Triglavca was analysed with the aim of obtaining insights into vessel use and early animal domestication and husbandry practices in the Adriatic region. Total lipid extracts were submitted to gas chromatography (GC, GC-mass spectrometry (GC-MS and GC-combustion-isotope ratio MS (GC-C-IRMS in order to obtain molecular and stable carbon isotope signatures as the basis for determining the nature and origins of the residues. The extracts were dominated by degraded animal fats. The majority (70% of the total lipid extracts displayed intact triacylglycerol distributions attributable to ruminant adipose and dairy fats, which were subsequently confirmed through C16:0 and C18:0 fatty acid δ13C values.

  13. N2-fixing tropical legume evolution: a contributor to enhanced weathering through the Cenozoic? (United States)

    Epihov, Dimitar Z; Batterman, Sarah A; Hedin, Lars O; Leake, Jonathan R; Smith, Lisa M; Beerling, David J


    Fossil and phylogenetic evidence indicates legume-rich modern tropical forests replaced Late Cretaceous palm-dominated tropical forests across four continents during the early Cenozoic (58-42 Ma). Tropical legume trees can transform ecosystems via their ability to fix dinitrogen (N 2 ) and higher leaf N compared with non-legumes (35-65%), but it is unclear how their evolutionary rise contributed to silicate weathering, the long-term sink for atmospheric carbon dioxide (CO 2 ). Here we hypothesize that the increasing abundance of N 2 -fixing legumes in tropical forests amplified silicate weathering rates by increased input of fixed nitrogen (N) to terrestrial ecosystems via interrelated mechanisms including increasing microbial respiration and soil acidification, and stimulating forest net primary productivity. We suggest the high CO 2 early Cenozoic atmosphere further amplified legume weathering. Evolution of legumes with high weathering rates was probably driven by their high demand for phosphorus and micronutrients required for N 2 -fixation and nodule formation. © 2017 The Author(s).

  14. Altered Evoked Gamma-Band Responses Reveal Impaired Early Visual Processing in ADHD Children (United States)

    Lenz, Daniel; Krauel, Kerstin; Flechtner, Hans-Henning; Schadow, Jeanette; Hinrichs, Hermann; Herrmann, Christoph S.


    Neurophysiological studies yield contrary results whether attentional problems of patients with attention-deficit/hyperactivity disorder (ADHD) are related to early visual processing deficits or not. Evoked gamma-band responses (GBRs), being among the first cortical responses occurring as early as 90 ms after visual stimulation in human EEG, have…

  15. Oxygen restriction as challenge test reveals early high-fat-diet-induced changes in glucose and lipid metabolism

    NARCIS (Netherlands)

    Duivenvoorde, L.P.M.; Schothorst, van E.M.; Derous, D.; Stelt, van der I.; Masania, J.; Rabbani, N.; Thornalley, P.J.; Keijer, J.


    Challenge tests stress homeostasis and may reveal deviations in health that remain masked under unchallenged conditions. Ideally, challenge tests are non-invasive and applicable in an early phase of an animal experiment. Oxygen restriction (OxR; based on ambient, mild normobaric hypoxia) is a

  16. A diminutive perinate European Enantiornithes reveals an asynchronous ossification pattern in early birds. (United States)

    Knoll, Fabien; Chiappe, Luis M; Sanchez, Sophie; Garwood, Russell J; Edwards, Nicholas P; Wogelius, Roy A; Sellers, William I; Manning, Phillip L; Ortega, Francisco; Serrano, Francisco J; Marugán-Lobón, Jesús; Cuesta, Elena; Escaso, Fernando; Sanz, Jose Luis


    Fossils of juvenile Mesozoic birds provide insight into the early evolution of avian development, however such fossils are rare. The analysis of the ossification sequence in these early-branching birds has the potential to address important questions about their comparative developmental biology and to help understand their morphological evolution and ecological differentiation. Here we report on an early juvenile enantiornithine specimen from the Early Cretaceous of Europe, which sheds new light on the osteogenesis in this most species-rich clade of Mesozoic birds. Consisting of a nearly complete skeleton, it is amongst the smallest known Mesozoic avian fossils representing post-hatching stages of development. Comparisons between this new specimen and other known early juvenile enantiornithines support a clade-wide asynchronous pattern of osteogenesis in the sternum and the vertebral column, and strongly indicate that the hatchlings of these phylogenetically basal birds varied greatly in size and tempo of skeletal maturation.

  17. Active faults paragenesis and the state of crustal stresses in the Late Cenozoic in Central Mongolia

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    V. A. Sankov


    Full Text Available Active faults of the Hangay-Hentiy tectonic saddle region in Central Mongolia are studied by space images interpretation, relief analysis, structural methods and tectonic stress reconstruction. The study results show that faults activation during the Late Cenozoic stage was selective, and a cluster pattern of active faults is typical for the study region. Morphological and genetic types and the kinematics of faults in the Hangay-Hentiy saddle region are related the direction of the ancient inherited structural heterogeneities. Latitudinal and WNW trending faults are left lateral strike-slips with reverse or thrust component (Dzhargalantgol and North Burd faults. NW trending faults are reverse faults or thrusts with left lateral horizontal component. NNW trending faults have right lateral horizontal component. The horizontal component of the displacements, as a rule, exceeds the vertical one. Brittle deformations in fault zones do not conform with the Pliocene and, for the most part, Pleistocene topography. With some caution it may be concluded that the last phase of revitalization of strike slip and reverse movements along the faults commenced in the Late Pleistocene. NE trending disjunctives are normal faults distributed mainly within the Hangay uplift. Their features are more early activation within the Late Cenozoic and the lack of relation to large linear structures of the previous tectonic stages. According to the stress tensor reconstructions of the last phase of deformation in zones of active faults of the Hangay-Hentiy saddle using data on tectonic fractures and fault displacements, it is revealed that conditions of compression and strike-slip with NNE direction of the axis of maximum compression were dominant. Stress tensors of extensional type with NNW direction of minimum compression are reconstructed for the Orkhon graben. It is concluded that the activation of faults in Central Mongolia in the Pleistocene-Holocene, as well as

  18. Relating Cenozoic North Sea sediments to topography in southern Norway:

    DEFF Research Database (Denmark)

    Anell, Ingrid Anna Margareta; Thybo, Hans; Stratford, Wanda Rose


    the Shetland platform continued throughout the Cenozoic while supply from southern Norway increased markedly around the Eocene–Oligocene, coeval with the greenhouse–icehouse transition. Mass balance calculations of sediment and eroded rock volumes suggest that while some topography along the western margin...... that Plio-Pleistocene erosion over-deepened a pre-existing topography....

  19. Patterns of Cenozoic sediment flux from western Scandinavia

    DEFF Research Database (Denmark)

    Gołędowski, Bartosz; Nielsen, S.B.; Clausen, O.R.


    deposits in the North Sea, the post-mid-Miocene Molo and Kai Formations of the Norwegian Shelf, the southern North Sea delta system and large volumes of the Late Pliocene-Holocene Naust Formation. The sediment flux from Scandinavia during the Cenozoic is in general agreement with the detrital flux...

  20. Large-scale Metabolomic Analysis Reveals Potential Biomarkers for Early Stage Coronary Atherosclerosis. (United States)

    Gao, Xueqin; Ke, Chaofu; Liu, Haixia; Liu, Wei; Li, Kang; Yu, Bo; Sun, Meng


    Coronary atherosclerosis (CAS) is the pathogenesis of coronary heart disease, which is a prevalent and chronic life-threatening disease. Initially, this disease is not always detected until a patient presents with seriously vascular occlusion. Therefore, new biomarkers for appropriate and timely diagnosis of early CAS is needed for screening to initiate therapy on time. In this study, we used an untargeted metabolomics approach to identify potential biomarkers that could enable highly sensitive and specific CAS detection. Score plots from partial least-squares discriminant analysis clearly separated early-stage CAS patients from controls. Meanwhile, the levels of 24 metabolites increased greatly and those of 18 metabolites decreased markedly in early CAS patients compared with the controls, which suggested significant metabolic dysfunction in phospholipid, sphingolipid, and fatty acid metabolism in the patients. Furthermore, binary logistic regression showed that nine metabolites could be used as a combinatorial biomarker to distinguish early-stage CAS patients from controls. The panel of nine metabolites was then tested with an independent cohort of samples, which also yielded satisfactory diagnostic accuracy (AUC = 0.890). In conclusion, our findings provide insight into the pathological mechanism of early-stage CAS and also supply a combinatorial biomarker to aid clinical diagnosis of early-stage CAS.

  1. Cenozoic extensional tectonics of the Western Anatolia Extended Terrane, Turkey

    International Nuclear Information System (INIS)

    Cemen, I; Catlos, E J; Gogus, O; Diniz, E; Hancer, M


    The Western Anatolia Extended Terrane in Turkey is located on the eastern side of the Aegean Extended Terrane and contains one of the largest metamorphic core complexes in the world, the Menderes massif. It has experienced a series of continental collisions from the Late Cretaceous to the Eocene during the formation of the Izmir-Ankara-Erzincan suture zone. Based our field work and monazite ages, we suggest that the north-directed postcollisional Cenozoic extension in the region is the product of three consecutive stages, triggered by three different mechanisms. The first stage was initiated about 30 Ma ago, in the Oligocene by the Orogenic Collapse the thermally weakened continental crust along the north-dipping Southwest Anatolian shear zone. The shear zone was formed as an extensional simple-shear zone with listric geometry at depth and exhibits predominantly normal-slip along its southwestern end. But, it becomes a high-angle oblique-slip shear zone along its northeastern termination. Evidence for the presence of the shear zone includes (1) the dominant top to the north-northeast shear sense indicators throughout the Menderes massif, such as stretching lineations trending N10E to N30E; and (2) a series of Oligocene extensional basins located adjacent to the shear zone that contain only carbonate and ophiolitic rock fragments, but no high grade metamorphic rock fragments. During this stage, erosion and extensional unroofing brought high-grade metamorphic rocks of the Central Menderes massif to the surface by the early Miocene. The second stage of the extension was triggered by subduction roll-back and associated back-arc extension in the early Miocene and produced the north-dipping Alasehir and the south-dipping Bueyuek Menderes detachments of the central Menderes massif and the north-dipping Simav detachment of the northern Menderes massif. The detachments control the Miocene sedimentation in the Alasehir, Bueyuek Menderes, and Simav grabens, containing high

  2. Biomarkers and their stable isotopes in Cenozoic sediments above the Chicxulub impact crater (United States)

    Grice, K.; Schaefer, B.; Coolen, M.; Greenwood, P. F.; Scarlett, A. G.; Freeman, K.; Lyons, S. L.


    The most widely accepted hypothesis for the cause of the End-Cretaceous mass extinction (K/Pg event) 66 Ma ago is the impact of an extra-terrestrial body, which produced the 200 km wide Chicxulub impact structure. This event led to an extinction of 75% of all species on Earth. The massive extinction in the terrestrial realm is partly attributed to the intense heat pulse, the widespread wild fires caused by the impact and the ensuing darkness, as dust and sulfate aerosols blocked out the sun leading to photosynthesis shut off and productivity collapse in both the terrestrial and marine realms. The marine realm may additionally have experienced ocean acidification resulting in mass extinction of plankton (foraminifera and coccolithophorids) and marine reptiles. Samples from the Cenozoic marine sediments including the Paleocene-Eocene Thermal Maximum (PETM) have been extracted for hydrocarbons and analysed to investigate the molecular and isotopic organic record of biotic and environmental change after the K/Pg boundary event. Specific biomarker-precursor relationship has been established by the direct correlation of sedimentary biomarkers with the biochemicals (e.g. lipids) of extant biological systems. The structural characterisation of biomarkers as well as their stable isotopic compositions (C, H and N) are used to evaluate the source(s) of organic matter (OM) and to reconstruct paleoenvironmental depositional conditions. Throughout the Cenozoic sediments (including the PETM) the biomarker distribution suggests a variation in the source of organic matter from terrestrial to marine. Furthermore, the presence of sulfurised biomarkers indicates euxinic environmental conditions at the time of deposition. Biomarker distributions indicative of green sulfur bacteria reveal persistent photic zone euxinic conditions at several intervals in the Cenozoic. Further compound specific isotope analyses will provide insights into the long-term biogeochemical cycling of C, H and S

  3. Transcriptomic profiling of bovine IVF embryos revealed candidate genes and pathways involved in early embryonic development

    Directory of Open Access Journals (Sweden)

    Yandell Brian S


    Full Text Available Abstract Background Early embryonic loss is a large contributor to infertility in cattle. Although genetic factors are known to affect early embryonic development, the discovery of such factors has been a serious challenge. The objective of this study was to identify genes differentially expressed between blastocysts and degenerative embryos at early stages of development. Results Using microarrays, genome-wide RNA expression was profiled and compared for in vitro fertilization (IVF - derived blastocysts and embryos undergoing degenerative development up to the same time point. Surprisingly similar transcriptomic profiles were found in degenerative embryos and blastocysts. Nonetheless, we identified 67 transcripts that significantly differed between these two groups of embryos at a 15% false discovery rate, including 33 transcripts showing at least a two-fold difference. Several signaling and metabolic pathways were found to be associated with the developmental status of embryos, among which were previously known important steroid biosynthesis and cell communication pathways in early embryonic development. Conclusions This study presents the first direct and comprehensive comparison of transcriptomes between IVF blastocysts and degenerative embryos, providing important information for potential genes and pathways associated with early embryonic development.

  4. Molecular imaging reveals elevated VEGFR-2 expression in retinal capillaries in diabetes: a novel biomarker for early diagnosis (United States)

    Sun, Dawei; Nakao, Shintaro; Xie, Fang; Zandi, Souska; Bagheri, Abouzar; Kanavi, Mozhgan Rezaei; Samiei, Shahram; Soheili, Zahra-Soheila; Frimmel, Sonja; Zhang, Zhongyu; Ablonczy, Zsolt; Ahmadieh, Hamid; Hafezi-Moghadam, Ali


    Diabetic retinopathy (DR) is a microvascular complication of diabetes and a leading cause of vision loss. Biomarkers and methods for early diagnosis of DR are urgently needed. Using a new molecular imaging approach, we show up to 94% higher accumulation of custom designed imaging probes against vascular endothelial growth factor receptor 2 (VEGFR-2) in retinal and choroidal vessels of diabetic animals (PM. R., Samiei, S., Soheili, Z.-S., Frimmel, S., Zhang, Z., Ablonczy, Z., Ahmadieh, H., Hafezi-Moghadam, A. Molecular imaging reveals elevated VEGFR-2 expression in retinal capillaries in diabetes: a novel biomarker for early diagnosis. PMID:24903276

  5. Cenozoic lithospheric deformation in Northeast Asia and the rapidly-aging Pacific Plate (United States)

    Yang, Ting; Moresi, Louis; Zhao, Dapeng; Sandiford, Dan; Whittaker, Joanne


    Northeast Asia underwent widespread rifting and magmatic events during the Cenozoic. The geodynamic origins of these tectonic events are often linked to Pacific plate subduction beneath Northeast Asia. However, the Japan Sea did not open until the late Oligocene, tens of millions of years after Pacific Plate subduction initiation in the Paleocene. Moreover, it is still not clear why the Baikal Rift Zone extension rate increased significantly after the late Miocene, while the Japan Sea opening ceased at the same time. Geodynamic models suggest these enigmatic events are related to the rapidly-aging Pacific Plate at the trench after Izanagi-Pacific spreading ridge subduction. Subduction of the young Pacific Plate delayed the Japan Sea opening during the Eocene while advection of the old Pacific Plate towards the trench increases seafloor age rapidly, allowing the Japan Sea to open after the early Miocene. The Japan Sea opening promotes fast trench retreat and slab stagnation, with subduction-induced wedge zone convection gradually increasing its extent during this process. The active rifting center associated with wedge zone convection upwelling also shifts inland-ward during slab stagnation, preventing further Japan Sea spreading while promoting the Baikal Rift Zone extension. Our geodynamic model provides a good explanation for the temporal-spatial patterns of the Cenozoic tectonic and magmatic events in Northeast Asia.

  6. Early Top-Down Influences on Bistable Perception Revealed by Event-Related Potentials (United States)

    Pitts, Michael A.; Gavin, William J.; Nerger, Janice L.


    A longstanding debate exists in the literature concerning bottom-up vs. top-down influences on bistable perception. Recently, a technique has been developed to measure early changes in brain activity (via ERPs) related to perceptual reversals (Kornmeier & Bach, 2004). An ERP component, the reversal negativity (RN) has been identified, and is…

  7. Barium distributions in teeth reveal early-life dietary transitions in primates. (United States)

    Austin, Christine; Smith, Tanya M; Bradman, Asa; Hinde, Katie; Joannes-Boyau, Renaud; Bishop, David; Hare, Dominic J; Doble, Philip; Eskenazi, Brenda; Arora, Manish


    Early-life dietary transitions reflect fundamental aspects of primate evolution and are important determinants of health in contemporary human populations. Weaning is critical to developmental and reproductive rates; early weaning can have detrimental health effects but enables shorter inter-birth intervals, which influences population growth. Uncovering early-life dietary history in fossils is hampered by the absence of prospectively validated biomarkers that are not modified during fossilization. Here we show that large dietary shifts in early life manifest as compositional variations in dental tissues. Teeth from human children and captive macaques, with prospectively recorded diet histories, demonstrate that barium (Ba) distributions accurately reflect dietary transitions from the introduction of mother's milk through the weaning process. We also document dietary transitions in a Middle Palaeolithic juvenile Neanderthal, which shows a pattern of exclusive breastfeeding for seven months, followed by seven months of supplementation. After this point, Ba levels in enamel returned to baseline prenatal levels, indicating an abrupt cessation of breastfeeding at 1.2 years of age. Integration of Ba spatial distributions and histological mapping of tooth formation enables novel studies of the evolution of human life history, dietary ontogeny in wild primates, and human health investigations through accurate reconstructions of breastfeeding history.

  8. Barium distributions in teeth reveal early life dietary transitions in primates (United States)

    Austin, Christine; Smith, Tanya M.; Bradman, Asa; Hinde, Katie; Joannes-Boyau, Renaud; Bishop, David; Hare, Dominic J.; Doble, Philip; Eskenazi, Brenda; Arora, Manish


    Early life dietary transitions reflect fundamental aspects of primate evolution and are important determinants of health in contemporary human populations1,2. Weaning is critical to developmental and reproductive rates; early weaning can have detrimental health effects but enables shorter inter-birth intervals, which influences population growth3. Uncovering early life dietary history in fossils is hampered by the absence of prospectively-validated biomarkers that are not modified during fossilisation4. Here we show that major dietary shifts in early life manifest as compositional variations in dental tissues. Teeth from human children and captive macaques, with prospectively-recorded diet histories, demonstrate that barium (Ba) distributions accurately reflect dietary transitions from the introduction of mother’s milk and through the weaning process. We also document transitions in a Middle Palaeolithic juvenile Neanderthal, which shows a pattern of exclusive breastfeeding for seven months, followed by seven months of supplementation. After this point, Ba levels in enamel returned to baseline prenatal levels, suggesting an abrupt cessation of breastfeeding at 1.2 years of age. Integration of Ba spatial distributions and histological mapping of tooth formation enables novel studies of the evolution of human life history, dietary ontogeny in wild primates, and human health investigations through accurate reconstructions of breastfeeding history. PMID:23698370

  9. Dynamic locomotor capabilities revealed by early dinosaur trackmakers from southern Africa.

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    Jeffrey A Wilson

    Full Text Available BACKGROUND: A new investigation of the sedimentology and ichnology of the Early Jurassic Moyeni tracksite in Lesotho, southern Africa has yielded new insights into the behavior and locomotor dynamics of early dinosaurs. METHODOLOGY/PRINCIPAL FINDINGS: The tracksite is an ancient point bar preserving a heterogeneous substrate of varied consistency and inclination that includes a ripple-marked riverbed, a bar slope, and a stable algal-matted bar top surface. Several basal ornithischian dinosaurs and a single theropod dinosaur crossed its surface within days or perhaps weeks of one another, but responded to substrate heterogeneity differently. Whereas the theropod trackmaker accommodated sloping and slippery surfaces by gripping the substrate with its pedal claws, the basal ornithischian trackmakers adjusted to the terrain by changing between quadrupedal and bipedal stance, wide and narrow gauge limb support (abduction range = 31 degrees , and plantigrade and digitigrade foot posture. CONCLUSIONS/SIGNIFICANCE: The locomotor adjustments coincide with changes in substrate consistency along the trackway and appear to reflect 'real time' responses to a complex terrain. It is proposed that these responses foreshadow important locomotor transformations characterizing the later evolution of the two main dinosaur lineages. Ornithischians, which shifted from bipedal to quadrupedal posture at least three times in their evolutionary history, are shown to have been capable of adopting both postures early in their evolutionary history. The substrate-gripping behavior demonstrated by the early theropod, in turn, is consistent with the hypothesized function of pedal claws in bird ancestors.

  10. Chinese characters reveal impacts of prior experience on very early stages of perception

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    Stollhoff Rainer


    Full Text Available Abstract Background Visual perception is strongly determined by accumulated experience with the world, which has been shown for shape, color, and position perception, in the field of visuomotor learning, and in neural computation. In addition, visual perception is tuned to statistics of natural scenes. Such prior experience is modulated by neuronal top-down control the temporal properties of which had been subject to recent studies. Here, we deal with these temporal properties and address the question how early in time accumulated past experience can modulate visual perception. Results We performed stimulus discrimination experiments and compared a group of Chinese participants with a German control group. The perception of our briefly presented visual objects (targets was disturbed by masking stimuli which appeared in close spatiotemporal proximity. These masking stimuli were either intact or scrambled Chinese characters and did not overlap with the targets. In contrast to German controls, Chinese participants show substantial performance differences for real versus scrambled Chinese characters if these masking stimuli were presented as early as less than 100 milliseconds after the onset of the target. For Chinese observers, it even occured that meaningful masking stimuli enhanced target identification if they were shown at least 100 milliseconds after target onset while the same stimuli impaired recognition if presented in close temporal proximity to the target. The latter finding challenges interpretations of our data that solely rely on stimulus contours or geometric properties and emphasizes the impact of prior experience on the very early temporal dynamics of the visual system. Conclusions Our findings demonstrate that prior experience which had been accummulated long before the experiments can modulate the time course of perception intriguingly early, namely already immediately after the perceptual onset of a visual event. This modulation

  11. Late Cenozoic continuous aridification in the western Qaidam Basin: evidence from sporopollen records

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    Y. F. Miao


    Full Text Available Cenozoic climate changes in inner Asia provide a basis for understanding linkages between global cooling, the Tibetan Plateau uplift, and possibly the development of the East Asian monsoon. Based on a compilation of palynological results from the western Qaidam Basin, this study reconstructed a 15-million-year (Ma record of changing vegetation and paleoclimates spanning the middle Miocene to present (comprising two series: ~ 18–5 Ma and ~ 3.1–0 Ma, respectively. The thermophilic percentages were highest between 18 and 14 Ma, and decreased after 14 Ma, closely corresponding to the Middle Miocene Climatic Optimum (MMCO between 18 and 14 Ma and the following global climatic cooling between 14 and 5 Ma. At the same time, decreases in the xerophytic and coniferous taxa percentages, and the increasing logarithmic ratio of non-arboreal pollen to arboreal pollen (ln (NAP/AP, reveal the continuous aridification across both the basin and surrounding mountains. Between ~ 3.1 and 0 Ma, the percentages of the thermophilic, xerophytic and coniferous pollen as well as the ln (NAP/AP imply further cooling and drying in this region since 3.1 Ma. We argue that these vegetation and climate patterns during the late Cenozoic western Qaidam Basin are primarily a result of the global cooling, with the Tibetan Plateau uplift and East Asian summer monsoon having contributions of lesser importance.

  12. Bird-like anatomy, posture, and behavior revealed by an early jurassic theropod dinosaur resting trace (United States)

    Milner, Andrew R.C.; Harris, J.D.; Lockley, M.G.; Kirkland, J.I.; Matthews, N.A.


    Background: Fossil tracks made by non-avian theropod dinosaurs commonly reflect the habitual bipedal stance retained in living birds. Only rarely-captured behaviors, such as crouching, might create impressions made by the hands. Such tracks provide valuable information concerning the often poorly understood functional morphology of the early theropod forelimb. Methodology/Principal Findings: Here we describe a well-preserved theropod trackway in a Lower Jurassic (???198 millionyear- old) lacustrine beach sandstone in the Whitmore Point Member of the Moenave Formation in southwestern Utah. The trackway consists of prints of typical morphology, intermittent tail drags and, unusually, traces made by the animal resting on the substrate in a posture very similar to modern birds. The resting trace includes symmetrical pes impressions and well-defined impressions made by both hands, the tail, and the ischial callosity. Conclusions/Significance: The manus impressions corroborate that early theropods, like later birds, held their palms facing medially, in contrast to manus prints previously attributed to theropods that have forward-pointing digits. Both the symmetrical resting posture and the medially-facing palms therefore evolved by the Early Jurassic, much earlier in the theropod lineage than previously recognized, and may characterize all theropods.

  13. The TESIS Project: Revealing Massive Early-Type Galaxies at z > 1 (United States)

    Saracco, P.; Longhetti, M.; Severgnini, P.; Della Ceca, R.; Braito, V.; Bender, R.; Drory, N.; Feulner, G.; Hopp, U.; Mannucci, F.; Maraston, C.

    How and when present-day massive early-type galaxies built up and what type of evolution has characterized their growth (star formation and/or merging) still remain open issues. The different competing scenarios of galaxy formation predict much different properties of early-type galaxies at z > 1. The "monolithic" collapse predicts that massive spheroids formed at high redshift (z > 2.5-3) and that their comoving density is constant at z 1, their comoving density decreases from z = 0 to z ~ 1.5 and they should experience their last burst of star formation at z 1 can be probed observationally once a well defined sample of massive early-types at z > 1 is available. We are constructing such a sample through a dedicated near-IR very low resolution (λ/Δλ≃50) spectroscopic survey (TNG EROs Spectroscopic Identification Survey, TESIS, [6]) of a complete sample of 30 bright (K < 18.5) Extremely Red Objects (EROs).

  14. Bird-like anatomy, posture, and behavior revealed by an early jurassic theropod dinosaur resting trace.

    Directory of Open Access Journals (Sweden)

    Andrew R C Milner

    Full Text Available BACKGROUND: Fossil tracks made by non-avian theropod dinosaurs commonly reflect the habitual bipedal stance retained in living birds. Only rarely-captured behaviors, such as crouching, might create impressions made by the hands. Such tracks provide valuable information concerning the often poorly understood functional morphology of the early theropod forelimb. METHODOLOGY/PRINCIPAL FINDINGS: Here we describe a well-preserved theropod trackway in a Lower Jurassic ( approximately 198 million-year-old lacustrine beach sandstone in the Whitmore Point Member of the Moenave Formation in southwestern Utah. The trackway consists of prints of typical morphology, intermittent tail drags and, unusually, traces made by the animal resting on the substrate in a posture very similar to modern birds. The resting trace includes symmetrical pes impressions and well-defined impressions made by both hands, the tail, and the ischial callosity. CONCLUSIONS/SIGNIFICANCE: The manus impressions corroborate that early theropods, like later birds, held their palms facing medially, in contrast to manus prints previously attributed to theropods that have forward-pointing digits. Both the symmetrical resting posture and the medially-facing palms therefore evolved by the Early Jurassic, much earlier in the theropod lineage than previously recognized, and may characterize all theropods.

  15. Bird-like anatomy, posture, and behavior revealed by an early jurassic theropod dinosaur resting trace. (United States)

    Milner, Andrew R C; Harris, Jerald D; Lockley, Martin G; Kirkland, James I; Matthews, Neffra A


    Fossil tracks made by non-avian theropod dinosaurs commonly reflect the habitual bipedal stance retained in living birds. Only rarely-captured behaviors, such as crouching, might create impressions made by the hands. Such tracks provide valuable information concerning the often poorly understood functional morphology of the early theropod forelimb. Here we describe a well-preserved theropod trackway in a Lower Jurassic ( approximately 198 million-year-old) lacustrine beach sandstone in the Whitmore Point Member of the Moenave Formation in southwestern Utah. The trackway consists of prints of typical morphology, intermittent tail drags and, unusually, traces made by the animal resting on the substrate in a posture very similar to modern birds. The resting trace includes symmetrical pes impressions and well-defined impressions made by both hands, the tail, and the ischial callosity. The manus impressions corroborate that early theropods, like later birds, held their palms facing medially, in contrast to manus prints previously attributed to theropods that have forward-pointing digits. Both the symmetrical resting posture and the medially-facing palms therefore evolved by the Early Jurassic, much earlier in the theropod lineage than previously recognized, and may characterize all theropods.

  16. Age and provenance of Triassic to Cenozoic sediments of West and Central Sarawak, Malaysia (United States)

    Breitfeld, H. Tim; Galin, Thomson; Hall, Robert


    Sarawak is located on the northern edge of Sundaland in NW Borneo. West and Central Sarawak include parts of the Kuching and Sibu Zones. These contain remnants of several sedimentary basins with ages from Triassic to Cenozoic. New light mineral, heavy mineral and U-Pb detrital zircon ages show differences in provenance reflecting the tectonic evolution of the region. The oldest clastic sediments are Triassic (Sadong Formation and its deep marine equivalent Kuching Formation). They were sourced by a Triassic (Carnian to Norian) volcanic arc and reworked Paleoproterozoic detritus derived from Cathaysialand. The Upper Jurassic to Cretaceous Pedawan Formation is interpreted as forearc basin fill with distinctive zircon populations indicating subduction beneath present-day West Sarawak which initiated in the Late Jurassic. Subsequent subduction until the early Late Cretaceous formed the Schwaner Mountains magmatic arc. After collision of SW Borneo and other microcontinental fragments with Sundaland in the early Late Cretaceous, deep marine sedimentation (Pedawan Formation) ceased, and there was uplift forming the regional Pedawan-Kayan unconformity. Two episodes of extension followed and were responsible for basin development on land in West Sarawak from the latest Cretaceous onwards, probably in a pull-apart setting. The first episode is associated with sediments of the Kayan Group, deposited in the Latest Cretaceous (Maastrichtian) to Eocene, and the second episode with Upper Eocene sediments of the Ketungau Basin. Zircon ages indicate volcanic activity throughout the Early Cenozoic in NW Borneo, and inherited zircon ages indicate reworking of Triassic and Cretaceous rocks. A large deep marine basin, the Rajang Basin, was north of the Lupar Line Fault in Central Sarawak (Sibu Zone) from the Late Cretaceous to the Late Eocene. Zircons from sediments of the Rajang Basin indicate they have similar ages and provenance to contemporaneous terrestrial sediments of the Kayan

  17. Reworked crustal of early Paleozoic WuYi Orogen revealed by receiver function data (United States)

    Wei, Y.; Duan, Y.; Tian, X.; Zhao, Y.


    Intraplate orogenic belt, which occurs at the rigid and undeformable plate interiors, is a distinct new type of orogen rather than an interplate or plate marginal orogenic belt, whose deformation occurs exclusively at plate margins. Therefore, intraplate orogenic belts are the most obvious exception to the plate-tectonic paradigm, they are uncommon in Earth's history. The early Paleozoic Wuyi orogen in South China is one of the few examples of intraplate orogen, and is a key to understanding the process of intraplate orogenesis and global early Paleozoic geodynamics. In this study, we select teleseismic records from 45 mobile linear seismic stations deployed in Wuyi Mountain and 58 permanent stations setting in Jiangxi and Fujian provinces, from January 2011 to December 2012, and calculate the crustal thickness and average crustal Vp/Vs ratio using the H-κ stacking method. The main results include the following: 1) the crustal average Poission's ratio shows an increase tendency from land to sea, the interior of Wuyi orogen belt with an low ration less than 0.23, and the coastline with high ration which is up to 0.28, which indicate a very heterogeneous crustal structure and composition in Wuyi orogen and coast belt. 2) the crustal thickness ranges 28-34 km and shows a tendency of thinning from inland to coast in the region of SE China margin, which maight mean the eastern Eurasia lithospheric is extension and thinning induced by the subducted paleo-Pacific slab. To conclusion, we assume that Wuyi orogen experienced upper crustal thickening, lower crust and lithosphere delamination during the early Paleozoic orogeny, and lithosphere extension in Mesozoic. This research is founded by the Natural Science Foundation of China (41174052 and 41604048).

  18. Classification tree analyses reveal limited potential for early targeted prevention against childhood overweight. (United States)

    Beyerlein, Andreas; Kusian, Dennis; Ziegler, Anette-Gabriele; Schaffrath-Rosario, Angelika; von Kries, Rüdiger


    Whether specific combinations of risk factors in very early life might allow identification of high-risk target groups for overweight prevention programs was examined. Data of n = 8981 children from the German KiGGS study were analyzed. Using a classification tree approach, predictive risk factor combinations were assessed for overweight in 3-6, 7-10, and 11-17-year-old children. In preschool children, the subgroup with the highest overweight risk were migrant children with at least one obese parent, with a prevalence of 36.6 (95% confidence interval or CI: 22.9, 50.4)%, compared to an overall prevalence of 10.0 (8.9, 11.2)%. The prevalence of overweight increased from 18.3 (16.8, 19.8)% to 57.9 (46.6, 69.3)% in 7-10-year-old children, if at least one parent was obese and the child had been born large-for-gestational-age. In 11-17-year-olds, the overweight risk increased from 20.1 (18.9, 21.3)% to 63.0 (46.4, 79.7)% in the highest risk group. However, high prevalence ratios were found only in small subgroups, containing <10% of all overweight cases in the respective age group. Our results indicate only a limited potential for early targeted preventions against overweight in children and adolescents. Copyright © 2013 The Obesity Society.

  19. Starch grains reveal early root crop horticulture in the Panamanian tropical forest. (United States)

    Piperno, D R; Ranere, A J; Holst, I; Hansell, P


    Native American populations are known to have cultivated a large number of plants and domesticated them for their starch-rich underground organs. Suggestions that the likely source of many of these crops, the tropical forest, was an early and influential centre of plant husbandry have long been controversial because the organic remains of roots and tubers are poorly preserved in archaeological sediments from the humid tropics. Here we report the occurrence of starch grains identifiable as manioc (Manihot esculenta Crantz), yams (Dioscorea sp.) and arrowroot (Maranta arundinacea L.) on assemblages of plant milling stones from preceramic horizons at the Aguadulce Shelter, Panama, dated between 7,000 and 5,000 years before present (BP). The artefacts also contain maize starch (Zea mays L.), indicating that early horticultural systems in this region were mixtures of root and seed crops. The data provide the earliest direct evidence for root crop cultivation in the Americas, and support an ancient and independent emergence of plant domestication in the lowland Neotropical forest.

  20. Synchrotron Reveals Early Triassic Odd Couple: Injured Amphibian and Aestivating Therapsid Share Burrow.

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    Vincent Fernandez

    Full Text Available Fossorialism is a beneficial adaptation for brooding, predator avoidance and protection from extreme climate. The abundance of fossilised burrow casts from the Early Triassic of southern Africa is viewed as a behavioural response by many tetrapods to the harsh conditions following the Permo-Triassic mass-extinction event. However, scarcity of vertebrate remains associated with these burrows leaves many ecological questions unanswered. Synchrotron scanning of a lithified burrow cast from the Early Triassic of the Karoo unveiled a unique mixed-species association: an injured temnospondyl amphibian (Broomistega that sheltered in a burrow occupied by an aestivating therapsid (Thrinaxodon. The discovery of this rare rhinesuchid represents the first occurrence in the fossil record of a temnospondyl in a burrow. The amphibian skeleton shows signs of a crushing trauma with partially healed fractures on several consecutive ribs. The presence of a relatively large intruder in what is interpreted to be a Thrinaxodon burrow implies that the therapsid tolerated the amphibian's presence. Among possible explanations for such unlikely cohabitation, Thrinaxodon aestivation is most plausible, an interpretation supported by the numerous Thrinaxodon specimens fossilised in curled-up postures. Recent advances in synchrotron imaging have enabled visualization of the contents of burrow casts, thus providing a novel tool to elucidate not only anatomy but also ecology and biology of ancient tetrapods.

  1. Immediate relativity: EEG reveals early engagement of comparison in social information processing. (United States)

    Ohmann, Katharina; Stahl, Jutta; Mussweiler, Thomas; Kedia, Gayannée


    A wide array of social decisions relies on social comparisons. As such, these decisions require fast access to relative information. Therefore, we expect that signatures of the comparative process should be observable in electrophysiological components at an early stage of information processing. However, to date, little is known about the neural time course of social target comparisons. Therefore, we tested this hypothesis in 2 electroencephalography (EEG) studies using a social distance effect paradigm. The distance effect capitalizes on the fact that stimuli close on a certain dimension take longer to compare than stimuli clearly differing on this dimension. Here, we manipulated the distance of face characteristics regarding their levels of attractiveness (Study 1) and trustworthiness (Study 2), 2 essential social dimensions. In both studies, size comparisons served as a nonsocial control condition. In Study 1, distance related effects were apparent 170 ms (vertex positive potential, VPP) and 200 ms (N2) after stimulus onset for attractiveness comparisons. In Study 2, trustworthiness comparisons took effect already after 100 ms (N1) and likewise carried over to an event-related N2. Remarkably, we observed a similar temporal pattern for social (attractiveness, trustworthiness) and nonsocial (size) dimensions. These results speak in favor of an early encoding of comparative information and emphasize the primary role of comparison in social information processing. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  2. Fires in the Cenozoic: a late flowering of flammable ecosystems


    Bond, William J.


    Modern flammable ecosystems include tropical and subtropical savannas, steppe grasslands, boreal forests, and temperate sclerophyll shrublands. Despite the apparent fiery nature of much contemporary vegetation, terrestrial fossil evidence would suggest we live in a time of low fire activity relative to the deep past. The inertinite content of coal, fossil charcoal, is strikingly low from the Eocene to the Pleistocene and no charcoalified mesofossils have been reported for the Cenozoic. Marine...

  3. Late-Cenozoic relief evolution under evolving climate: A review


    Champagnac Jean Daniel; Valla Pierre G.; Herman Frédéric


    The present review paper is an attempt to summarize quantitative evidence of Late Cenozoic changes in topographic relief. Different meanings of the word "relief" as it is commonly used and detail the metrics used to quantify it. We then specify methodological tools used to quantify relief change (primarily low temperature thermochronometry and terrestrial cosmogenic nuclides) and analyze published evidence for different regions.Our review first shows that relief changes and rates of changes a...

  4. The III working days of the Cenozoic

    International Nuclear Information System (INIS)


    The third working days in geology were organized by the Uruguayan Society of geology and took place in DINAMIGE in June - 2012. The lectures were given by national and foreign professionals and included important topics such as mineral raw materials used in the archaeological artifacts in Guayacas - Dayman - Paysandu . The Holocene in the coastal zone of Uruguay. Aspect of the early human occupation in Uruguay. Change effects in the land use about the mineral clay (eucalyptus forestation, illite). Paleoclimatic and paleoenvironmental reconstruction for middle and late holocene (Rocha). Gas hydrate resource quantification in Uruguay. Application of the geophysical techniques in the environmental pollution in Montevideo - Piriapolis. Environmental evolution and builders of small hills in India Muerta zone. Human or natural forcing in the geomorphological processes in Pocitos and Ramirez beaches (80 years of aerophotographic records).Tipology and nomenclature proposal for technological soil. Quarries reconditioning methodology. Hydraulic conductivity in sugar cane cultivated in soils previous vinaza application. Paleosoils and pedogenic calcretes formations in Fray Bentos (Oligocene - early miocene) Raigon (late pliocene and Middle pleistocene) and Libertad (early - middle pleistocene). Tectonics and sedimentary process in the continental talud in Uruguay. Rio de la Plata as paleoenvironmental focus using diatomos as proxies. Oleistocene mammals in the late-early Holocene in Santa Lucia river basin (Uruguay southern). Anthropization in Montevideo Bay during the Holocene. Paleocene stratigraphic plays in Uruguay offshore. Continental Influence versus marine transition in Rio de la Plata zone - internal continental shelf of the South Atlantic - a multiproxy study. Macrofossils vegetable in Palmar formation (later pleistocene) in Entre Rios - Argentina. Phytolith analysis in quaternary fluvial sediment (plio-pleistocene) in San Salvador and Palmar formation - Uruguay

  5. Ancient igneous intrusions and early expansion of the Moon revealed by GRAIL gravity gradiometry. (United States)

    Andrews-Hanna, Jeffrey C; Asmar, Sami W; Head, James W; Kiefer, Walter S; Konopliv, Alexander S; Lemoine, Frank G; Matsuyama, Isamu; Mazarico, Erwan; McGovern, Patrick J; Melosh, H Jay; Neumann, Gregory A; Nimmo, Francis; Phillips, Roger J; Smith, David E; Solomon, Sean C; Taylor, G Jeffrey; Wieczorek, Mark A; Williams, James G; Zuber, Maria T


    The earliest history of the Moon is poorly preserved in the surface geologic record due to the high flux of impactors, but aspects of that history may be preserved in subsurface structures. Application of gravity gradiometry to observations by the Gravity Recovery and Interior Laboratory (GRAIL) mission results in the identification of a population of linear gravity anomalies with lengths of hundreds of kilometers. Inversion of the gravity anomalies indicates elongated positive-density anomalies that are interpreted to be ancient vertical tabular intrusions or dikes formed by magmatism in combination with extension of the lithosphere. Crosscutting relationships support a pre-Nectarian to Nectarian age, preceding the end of the heavy bombardment of the Moon. The distribution, orientation, and dimensions of the intrusions indicate a globally isotropic extensional stress state arising from an increase in the Moon's radius by 0.6 to 4.9 kilometers early in lunar history, consistent with predictions of thermal models.

  6. Infrasound reveals transition to oscillatory discharge regime during lava fountaining: Implication for early warning (United States)

    Ulivieri, Giacomo; Ripepe, Maurizio; Marchetti, Emanuele


    present the analysis of ~4 million infrasonic signals which include 39 episodes of lava fountains recorded at 5.5 km from the active vents. We show that each eruptive episode is characterized by a distinctive trend in the amplitude, waveform, and frequency content of the acoustic signals, reflecting different explosive levels. Lava fountain starts with an ~93 min long violent phase of acoustic transients at ~1.25 Hz repeating every 2-5 s. Infrasound suddenly evolves into a persistent low-frequency quasi-monochromatic pressure oscillation at ~0.4 Hz. We interpret this shift as induced by the transition from the slug (discrete Strombolian) to churn flow (sustained lava fountain) regime that is reflecting an increase in the gas discharge rate. We calculate that infrasonic transition can occur at a gas superficial velocity of ≤76 m/s and it can be used to define infrasonic-based thresholds for an efficient early warning system.

  7. The behavior of larval zebrafish reveals stressor-mediated anorexia during early vertebrate development (United States)

    De Marco, Rodrigo J.; Groneberg, Antonia H.; Yeh, Chen-Min; Treviño, Mario; Ryu, Soojin


    The relationship between stress and food consumption has been well documented in adults but less so in developing vertebrates. Here we demonstrate that an encounter with a stressor can suppress food consumption in larval zebrafish. Furthermore, we provide indication that food intake suppression cannot be accounted for by changes in locomotion, oxygen consumption and visual responses, as they remain unaffected after exposure to a potent stressor. We also show that feeding reoccurs when basal levels of cortisol (stress hormone in humans and teleosts) are re-established. The results present evidence that the onset of stress can switch off the drive for feeding very early in vertebrate development, and add a novel endpoint for analyses of metabolic and behavioral disorders in an organism suitable for high-throughput genetics and non-invasive brain imaging. PMID:25368561

  8. Ancient DNA reveals genetic connections between early Di-Qiang and Han Chinese. (United States)

    Li, Jiawei; Zeng, Wen; Zhang, Ye; Ko, Albert Min-Shan; Li, Chunxiang; Zhu, Hong; Fu, Qiaomei; Zhou, Hui


    Ancient Di-Qiang people once resided in the Ganqing region of China, adjacent to the Central Plain area from where Han Chinese originated. While gene flow between the Di-Qiang and Han Chinese has been proposed, there is no evidence to support this view. Here we analyzed the human remains from an early Di-Qiang site (Mogou site dated ~4000 years old) and compared them to other ancient DNA across China, including an early Han-related site (Hengbei site dated ~3000 years old) to establish the underlying genetic relationship between the Di-Qiang and ancestors of Han Chinese. We found Mogou mtDNA haplogroups were highly diverse, comprising 14 haplogroups: A, B, C, D (D*, D4, D5), F, G, M7, M8, M10, M13, M25, N*, N9a, and Z. In contrast, Mogou males were all Y-DNA haplogroup O3a2/P201; specifically one male was further assigned to O3a2c1a/M117 using targeted unique regions on the non-recombining region of the Y-chromosome. We compared Mogou to 7 other ancient and 38 modern Chinese groups, in a total of 1793 individuals, and found that Mogou shared close genetic distances with Taojiazhai (a more recent Di-Qiang population), Hengbei, and Northern Han. We modeled their interactions using Approximate Bayesian Computation, and support was given to a potential admixture of ~13-18% between the Mogou and Northern Han around 3300-3800 years ago. Mogou harbors the earliest genetically identifiable Di-Qiang, ancestral to the Taojiazhai, and up to ~33% paternal and ~70% of its maternal haplogroups could be found in present-day Northern Han Chinese.

  9. Gene expression profiles reveal key genes for early diagnosis and treatment of adamantinomatous craniopharyngioma. (United States)

    Yang, Jun; Hou, Ziming; Wang, Changjiang; Wang, Hao; Zhang, Hongbing


    Adamantinomatous craniopharyngioma (ACP) is an aggressive brain tumor that occurs predominantly in the pediatric population. Conventional diagnosis method and standard therapy cannot treat ACPs effectively. In this paper, we aimed to identify key genes for ACP early diagnosis and treatment. Datasets GSE94349 and GSE68015 were obtained from Gene Expression Omnibus database. Consensus clustering was applied to discover the gene clusters in the expression data of GSE94349 and functional enrichment analysis was performed on gene set in each cluster. The protein-protein interaction (PPI) network was built by the Search Tool for the Retrieval of Interacting Genes, and hubs were selected. Support vector machine (SVM) model was built based on the signature genes identified from enrichment analysis and PPI network. Dataset GSE94349 was used for training and testing, and GSE68015 was used for validation. Besides, RT-qPCR analysis was performed to analyze the expression of signature genes in ACP samples compared with normal controls. Seven gene clusters were discovered in the differentially expressed genes identified from GSE94349 dataset. Enrichment analysis of each cluster identified 25 pathways that highly associated with ACP. PPI network was built and 46 hubs were determined. Twenty-five pathway-related genes that overlapped with the hubs in PPI network were used as signatures to establish the SVM diagnosis model for ACP. The prediction accuracy of SVM model for training, testing, and validation data were 94, 85, and 74%, respectively. The expression of CDH1, CCL2, ITGA2, COL8A1, COL6A2, and COL6A3 were significantly upregulated in ACP tumor samples, while CAMK2A, RIMS1, NEFL, SYT1, and STX1A were significantly downregulated, which were consistent with the differentially expressed gene analysis. SVM model is a promising classification tool for screening and early diagnosis of ACP. The ACP-related pathways and signature genes will advance our knowledge of ACP pathogenesis

  10. Early Gene Expression in Wounded Human Keratinocytes Revealed by DNA Microarray Analysis

    Directory of Open Access Journals (Sweden)

    Pascal Barbry


    Full Text Available Wound healing involves several steps: spreading of the cells, migration and proliferation. We have profiled gene expression during the early events of wound healing in normal human keratinocytes with a home-made DNA microarray containing about 1000 relevant human probes. An original wounding machine was used, that allows the wounding of up to 40% of the surface of a confluent monolayer of cultured cells grown on a Petri dish (compared with 5% with a classical ‘scratch’ method. The two aims of the present study were: (a to validate a limited number of genes by comparing the expression levels obtained with this technique with those found in the literature; (b to combine the use of the wounding machine with DNA microarray analysis for large-scale detection of the molecular events triggered during the early stages of the wound-healing process. The time-courses of RNA expression observed at 0.5, 1.5, 3, 6 and 15 h after wounding for genes such as c-Fos, c-Jun, Egr1, the plasminogen activator PLAU (uPA and the signal transducer and transcription activator STAT3, were consistent with previously published data. This suggests that our methodologies are able to perform quantitative measurement of gene expression. Transcripts encoding two zinc finger proteins, ZFP36 and ZNF161, and the tumour necrosis factor α-induced protein TNFAIP3, were also overexpressed after wounding. The role of the p38 mitogen-activated protein kinase (p38MAPK in wound healing was shown after the inhibition of p38 by SB203580, but our results also suggest the existence of surrogate activating pathways.

  11. The role of Mesozoic sedimentary basin tapers on the formation of Cenozoic crustal shortening structures and foredeep in the western Sichuan Basin, China (United States)

    Wang, M.


    The foreland basin records important clues of tectonic and sedimentary process of mountain-building, thus to explore its dynamic mechanism on the formation is an important issue of the mountain-basin interaction. The Longmen Shan fold-and-thrust belt and its adjacent Sichuan basin located in the eastern margin of Tibetan Plateau, are one of the most-concerned regions of studying modern mountain-building and seismic process, and are also a natural laboratory of studying the dynamics of the formation and development of foreland basin. However, it still need further explore on the mechanics of the development of the Cenozoic foreland basin and thrust-belts in the western Sichuan Basin. The Longmen Shan thrust belt has experienced multi-stages of tectonics evolution, foreland basin formation and topography growth since Late Triassic, and whether the early formed basin architecture and large Mesozoic sedimentary basin taper can influence the formation and development of the Cenozoic foreland basin and thrust belts? To solve these issues, this project aim to focus on the Cenozoic foreland basin and internal crustal shortening structures in the western Sichuan basin, on the basis of growth critical wedge taper theory. We will reconstruct the shape of multi-phases of sedimentary basin tapers, the temporal-spatial distribution of crustal shortening and thrusting sequences, and analyze the control mechanism of Mesozoic sedimentary basin taper on the formation of Cenozoic foreland basins, and final explore the interaction between the tectonics geomorphology, stress field and dynamic propagation of foreland basin.

  12. Study on the relationships between the structural evolution and sandstone-type uranium mineralization in mesozoic era and cenozoic era in the northern of Chaidam basin

    International Nuclear Information System (INIS)

    Liu Lin; Song Zhe; Song Xiansheng; Feng Wei


    By detailed expounding the characteristics of the Mesozoic and Cenozoic structural evolution in northern of Chaidam basin, the author inquires into its relationships with the sandstone-type uranium mineralization, analyzes the prospect of forming uranium deposit, and thinks that the Mesozoic and Cenozoic strata are mainly controlled by the tectonic role of the later Yanshan movement and the later Cenozoic era. The north-west palaeo-structural slope belt is formed in the later Cretacous Epoch that is favorable for developing palaeo-interlayer oxidized zone. After the slightly extensional role of the oldest Tertiary and the early Plioeene, the middle and lower Jurassic were buried, and the block-imbricated slope belts are formed in the tectonic movement of the later Cenozoic, which are favorable for developing recent interlayer oxidized zone. According to drilling, it has the conditions for forming palaeo-recent interlayer oxidized zone sandstone-type uranium deposit at the northern of Chaidam basin. Finally, the author lays his finger on the prospecting of uranium. (authors)

  13. Integrative analyses reveal novel strategies in HPV11,-16 and-45 early infection

    DEFF Research Database (Denmark)

    Kaczkowski, Bogumil; Rossing, Maria; Andersen, Ditte


    of genes not previously implicated in HPV biology, such as the PSG family and ANKRD1, and of genes implicated in the biology of other viruses, e. g. MX1, IFI44 and DDX60. Carcinogenesis-related genes, e. g. ABL2, MGLL and CYR61, were upregulated by high-risk HPV16 and -45. The integrative analysis revealed...... the suppression of DNA repair by HPV11 and -16, and downregulation of cytoskeleton genes by all HPV types. Various signalling pathways were affected by the HPVs: IL-2 by HPV11; JAK-STAT by HPV16; and TGF-beta, NOTCH and tyrosine kinase signalling by HPV45. This study uncovered novel strategies employed by HPV...... to establish infection and promote uncontrolled growth....

  14. Stratigraphy and Mesozoic–Cenozoic tectonic history of northern Sierra Los Ajos and adjacent areas, Sonora, Mexico (United States)

    Page, William R.; Gray, Floyd; Iriondo, Alexander; Miggins, Daniel P.; Blodgett, Robert B.; Maldonado, Florian; Miller, Robert J.


    Geologic mapping in the northern Sierra Los Ajos reveals new stratigraphic and structural data relevant to deciphering the Mesozoic–Cenozoic tectonic evolution of the range. The northern Sierra Los Ajos is cored by Proterozoic, Cambrian, Devonian, Mississippian, and Pennsylvanian strata, equivalent respectively to the Pinal Schist, Bolsa Quartzite and Abrigo Limestone, Martin Formation, Escabrosa Limestone, and Horquilla Limestone. The Proterozoic–Paleozoic sequence is mantled by Upper Cretaceous rocks partly equivalent to the Fort Crittenden and Salero Formations in Arizona, and the Cabullona Group in Sonora, Mexico.Absence of the Upper Jurassic–Lower Cretaceous Bisbee Group below the Upper Cretaceous rocks and above the Proterozoic–Paleozoic rocks indicates that the Sierra Los Ajos was part of the Cananea high, a topographic highland during the Late Jurassic and Early Cretaceous. Deposition of Upper Cretaceous rocks directly on Paleozoic and Proterozoic rocks indicates that the Sierra Los Ajos area had subsided as part of the Laramide Cabullona basin during Late Cretaceous time. Basal beds of the Upper Cretaceous sequence are clast-supported conglomerate composed locally of basement (Paleozoic) clasts. The conglomerate represents erosion of Paleozoic basement in the Sierra Los Ajos area coincident with development of the Cabullona basin.The present-day Sierra Los Ajos reaches elevations of greater than 2600 m, and was uplifted during Tertiary basin-and-range extension. Upper Cretaceous rocks are exposed at higher elevations in the northern Sierra Los Ajos and represent an uplifted part of the inverted Cabullona basin. Tertiary uplift of the Sierra Los Ajos was largely accommodated by vertical movement along the north-to-northwest-striking Sierra Los Ajos fault zone flanking the west side of the range. This fault zone structurally controls the configuration of the headwaters of the San Pedro River basin, an important bi-national water resource in the US

  15. Early Miocene amber inclusions from Mexico reveal antiquity of mangrove-associated copepods. (United States)

    Huys, Rony; Suárez-Morales, Eduardo; Serrano-Sánchez, María de Lourdes; Centeno-García, Elena; Vega, Francisco J


    Copepods are aquatic microcrustaceans and represent the most abundant metazoans on Earth, outnumbering insects and nematode worms. Their position of numerical world predominance can be attributed to three principal radiation events, i.e. their major habitat shift into the marine plankton, the colonization of freshwater and semiterrestrial environments, and the evolution of parasitism. Their variety of life strategies has generated an incredible morphological plasticity and disparity in body form and shape that are arguably unrivalled among the Crustacea. Although their chitinous exoskeleton is largely resistant to chemical degradation copepods are exceedingly scarce in the geological record with limited body fossil evidence being available for only three of the eight currently recognized orders. The preservation of aquatic arthropods in amber is unusual but offers a unique insight into ancient subtropical and tropical ecosystems. Here we report the first discovery of amber-preserved harpacticoid copepods, represented by ten putative species belonging to five families, based on Early Miocene (22.8 million years ago) samples from Chiapas, southeast Mexico. Their close resemblance to Recent mangrove-associated copepods highlights the antiquity of the specialized harpacticoid fauna living in this habitat. With the taxa reported herein, the Mexican amber holds the greatest diversity of fossil copepods worldwide.

  16. Adaptive genomic evolution of opsins reveals that early mammals flourished in nocturnal environments. (United States)

    Borges, Rui; Johnson, Warren E; O'Brien, Stephen J; Gomes, Cidália; Heesy, Christopher P; Antunes, Agostinho


    Based on evolutionary patterns of the vertebrate eye, Walls (1942) hypothesized that early placental mammals evolved primarily in nocturnal habitats. However, not only Eutheria, but all mammals show photic characteristics (i.e. dichromatic vision, rod-dominated retina) suggestive of a scotopic eye design. Here, we used integrative comparative genomic and phylogenetic methodologies employing the photoreceptive opsin gene family in 154 mammals to test the likelihood of a nocturnal period in the emergence of all mammals. We showed that mammals possess genomic patterns concordant with a nocturnal ancestry. The loss of the RH2, VA, PARA, PARIE and OPN4x opsins in all mammals led us to advance a probable and most-parsimonious hypothesis of a global nocturnal bottleneck that explains the loss of these genes in the emerging lineage (> > 215.5 million years ago). In addition, ancestral character reconstruction analyses provided strong evidence that ancestral mammals possessed a nocturnal lifestyle, ultra-violet-sensitive vision, low visual acuity and low orbit convergence (i.e. panoramic vision). Overall, this study provides insight into the evolutionary history of the mammalian eye while discussing important ecological aspects of the photic paleo-environments ancestral mammals have occupied.

  17. Mesozoic to Cenozoic magmatic history of the Pamir (United States)

    Chapman, James B.; Scoggin, Shane H.; Kapp, Paul; Carrapa, Barbara; Ducea, Mihai N.; Worthington, James; Oimahmadov, Ilhomjon; Gadoev, Mustafo


    New geochronologic, geochemical, and isotopic data for Mesozoic to Cenozoic igneous rocks and detrital minerals from the Pamir Mountains help to distinguish major regional magmatic episodes and constrain the tectonic evolution of the Pamir orogenic system. After final accretion of the Central and South Pamir terranes during the Late Triassic to Early Jurassic, the Pamir was largely amagmatic until the emplacement of the intermediate (SiO2 > 60 wt.%), calc-alkaline, and isotopically evolved (-13 to -5 zircon εHf(t)) South Pamir batholith between 120-100 Ma, which is the most volumetrically significant magmatic complex in the Pamir and includes a high flux magmatic event at ∼105 Ma. The South Pamir batholith is interpreted as the northern (inboard) equivalent of the Cretaceous Karakoram batholith and the along-strike equivalent of an Early Cretaceous magmatic belt in the northern Lhasa terrane in Tibet. The northern Lhasa terrane is characterized by a similar high-flux event at ∼110 Ma. Migration of continental arc magmatism into the South Pamir terrane during the mid-Cretaceous is interpreted to reflect northward directed, low-angle to flat-slab subduction of the Neo-Tethyan oceanic lithosphere. Late Cretaceous magmatism (80-70 Ma) in the Pamir is scarce, but concentrated in the Central and northern South Pamir terranes where it is comparatively more mafic (SiO2 roll-back of the Neotethyan oceanic slab, which is consistent with similarly aged extension-related magmatism in the Karakoram terrane and Kohistan. There is an additional pulse of magmatism in the Pamir at 42-36 Ma that is geographically restricted (∼150 km diameter ellipsoidal area) and referred to as the Vanj magmatic complex. The Vanj complex comprises metaluminous, high-K calc-alkaline to shoshonitic monzonite, syenite, and granite that is adakitic (La/YbN = 13 to 57) with low Mg# (35-41). The Vanj complex displays a range of SiO2 (54-75 wt.%) and isotopic compositions (-7 to -3 εNd(i), 0.706 to

  18. Comparative Genomics of Early-Diverging Brucella Strains Reveals a Novel Lipopolysaccharide Biosynthesis Pathway (United States)

    Wattam, Alice R.; Inzana, Thomas J.; Williams, Kelly P.; Mane, Shrinivasrao P.; Shukla, Maulik; Almeida, Nalvo F.; Dickerman, Allan W.; Mason, Steven; Moriyón, Ignacio; O’Callaghan, David; Whatmore, Adrian M.; Sobral, Bruno W.; Tiller, Rebekah V.; Hoffmaster, Alex R.; Frace, Michael A.; De Castro, Cristina; Molinaro, Antonio; Boyle, Stephen M.; De, Barun K.; Setubal, João C.


    ABSTRACT Brucella species are Gram-negative bacteria that infect mammals. Recently, two unusual strains (Brucella inopinata BO1T and B. inopinata-like BO2) have been isolated from human patients, and their similarity to some atypical brucellae isolated from Australian native rodent species was noted. Here we present a phylogenomic analysis of the draft genome sequences of BO1T and BO2 and of the Australian rodent strains 83-13 and NF2653 that shows that they form two groups well separated from the other sequenced Brucella spp. Several important differences were noted. Both BO1T and BO2 did not agglutinate significantly when live or inactivated cells were exposed to monospecific A and M antisera against O-side chain sugars composed of N-formyl-perosamine. While BO1T maintained the genes required to synthesize a typical Brucella O-antigen, BO2 lacked many of these genes but still produced a smooth LPS (lipopolysaccharide). Most missing genes were found in the wbk region involved in O-antigen synthesis in classic smooth Brucella spp. In their place, BO2 carries four genes that other bacteria use for making a rhamnose-based O-antigen. Electrophoretic, immunoblot, and chemical analyses showed that BO2 carries an antigenically different O-antigen made of repeating hexose-rich oligosaccharide units that made the LPS water-soluble, which contrasts with the homopolymeric O-antigen of other smooth brucellae that have a phenol-soluble LPS. The results demonstrate the existence of a group of early-diverging brucellae with traits that depart significantly from those of the Brucella species described thus far. PMID:22930339

  19. Genome-wide allelotyping of a new in vitro model system reveals early events in breast cancer progression. (United States)

    Li, Zheng; Meng, Zhen Hang; Sayeed, Aejaz; Shalaby, Refaat; Ljung, Britt-Marie; Dairkee, Shanaz H


    Toward the goal of identifying early genetic losses, which mediate the release of human breast epithelium from replicative suppression leading to cellular immortalization, we have used a newly developed in vitro model system. This system consists of epithelial cultures derived from noncancerous breast tissue, treated with the chemical carcinogen N-ethyl-N-nitrosourea, and continuously passaged to yield cell populations culminating in the immortal phenotype. Genome-wide allelotyping of early passage N-ethyl-N-nitrosourea-exposed cell populations revealed aberrations at >10% (18 of 169) loci examined. Allelic losses encompassing chromosomes 6q24-6q27, implicating immortalization-associated candidate genes, hZAC and SEN6, occurred in two independently derived cell lines before the Hayflick limit. Additional LOH sites were present in one cell line at 3p11-3p26, 11p15, and 20p12-13. Allelic losses reported in this cell line preceded detectable levels of telomerase activity and the occurrence of p53-related aberrations. Information gained from the search for early immortalization-associated genetic deletions in cultured cells was applied in a novel approach toward the analysis of morphologically normal terminal ductal lobular units microdissected from 20 cases of ductal carcinoma in situ. Notably, clonal allelic losses at chromosome 3p24 and 6q24 were an early occurrence in adjoining terminal ductal lobular units of a proportion of primary tumors, which displayed loss of heterozygosity (3 of 11 and 3 of 6, respectively). The biological insights provided by the new model system reported here strongly suggest that early allelic losses delineated in immortalized cultures and validated in vivo could serve as surrogate endpoints to assist in the identification and intervention of high-risk benign breast tissue, which sustains the potential for continuous proliferation.

  20. Liquefaction along Late Pleistocene to early Holocene Faults as Revealed by Lidar in Northwest Tasmania, Australia (United States)

    Webb, J.; Gardner, T.


    In northwest Tasmania well-preserved mid-Holocene beach ridges with maximum radiocarbon ages of 5.25 ka occur along the coast; inland are a parallel set of lower relief beach ridges of probable MIS 5e age. The latter are cut by northeast-striking faults clearly visible on LIDAR images, with a maximum vertical displacement (evident as difference in topographic elevation) of 3 m. Also distinct on the LIDAR images are large sand boils along the fault lines; they are up to 5 m in diameter and 2-3 m high and mostly occur on the hanging wall close to the fault traces. Without LIDAR it would have been almost impossible to distinguish either the fault scarps or the sand boils. Excavations through the sand boils show that they are massive, with no internal structure, suggesting that they formed in a single event. They are composed of well-sorted, very fine white sand, identical to the sand in the underlying beach ridges. The sand boils overlie a peaty paleosol; this formed in the tea-tree swamp that formerly covered the area, and has been offset along the faults. Radiocarbon dating of the buried organic-rich paleosol gave ages of 14.8-7.2 ka, suggesting that the faulting is latest Pleistocene to early Holocene in age; it occurred prior to deposition of the mid-Holocene beach ridges, which are not offset. The beach ridge sediments are up to 7 m thick and contain an iron-cemented hard pan 1-3 m below the surface. The water table is very shallow and close to the ground surface, so the sands of the beach ridges are mostly saturated. During faulting these sands experienced extensive liquefaction. The resulting sand boils rose to a substantial height of 2-3 m, probably possibly reflecting the elevation of the potentiometric surface within the confined part of the beach ridge sediments below the iron-cemented hard pan. Motion on the faults was predominantly dip slip (shown by an absence of horizontal offset) and probably reverse, which is consistent with the present-day northwest

  1. A zebrafish larval model reveals early tissue-specific innate immune responses to Mucor circinelloides. (United States)

    Voelz, Kerstin; Gratacap, Remi L; Wheeler, Robert T


    Mucormycosis is an emerging fungal infection that is clinically difficult to manage, with increasing incidence and extremely high mortality rates. Individuals with diabetes, suppressed immunity or traumatic injury are at increased risk of developing disease. These individuals often present with defects in phagocytic effector cell function. Research using mammalian models and phagocytic effector cell lines has attempted to decipher the importance of the innate immune system in host defence against mucormycosis. However, these model systems have not been satisfactory for direct analysis of the interaction between innate immune effector cells and infectious sporangiospores in vivo. Here, we report the first real-time in vivo analysis of the early innate immune response to mucormycete infection using a whole-animal zebrafish larval model system. We identified differential host susceptibility, dependent on the site of infection (hindbrain ventricle and swim bladder), as well as differential functions of the two major phagocyte effector cell types in response to viable and non-viable spores. Larval susceptibility to mucormycete spore infection was increased upon immunosuppressant treatment. We showed for the first time that macrophages and neutrophils were readily recruited in vivo to the site of infection in an intact host and that spore phagocytosis can be observed in real-time in vivo. While exploring innate immune effector recruitment dynamics, we discovered the formation of phagocyte clusters in response to fungal spores that potentially play a role in fungal spore dissemination. Spores failed to activate pro-inflammatory gene expression by 6 h post-infection in both infection models. After 24 h, induction of a pro-inflammatory response was observed only in hindbrain ventricle infections. Only a weak pro-inflammatory response was initiated after spore injection into the swim bladder during the same time frame. In the future, the zebrafish larva as a live whole

  2. Correlation of transcriptomic responses and metal bioaccumulation in Mytilus edulis L. reveals early indicators of stress

    Energy Technology Data Exchange (ETDEWEB)

    Poynton, Helen C., E-mail:; Robinson, William E.; Blalock, Bonnie J.; Hannigan, Robyn E.


    , three transcripts directly involved in the unfolded protein response (UPR) were induced in the metal treatments at 2 weeks and were further up-regulated at 4 weeks. Overall, correlation of tissue concentrations and gene expression responses indicates that as mussels accumulate higher concentrations of metals, initial stress responses are mobilized to protect tissues. However, given the role of UPR in apoptosis, it serves as an early indicator of stress, which once overwhelmed will result in adverse physiological effects.

  3. Methods of early revealing, prognosis of further course and complications of pollinosis

    Directory of Open Access Journals (Sweden)

    Chukhrienko N.D.


    Full Text Available Under our observation there were 59 patients with pollinosis – 39 females and 20 males at the age from 18 to 68 years. All patients were in the phase of disease exacerbation. General clinical symptoms were: rhinitis, conjunctivitis and bronchial spasm. The results showed that first clinical manifestations appear in persons of young age. Half of the patients had aggravated allergologic anamnesis. Taking into account that pollinosis is a typical representative of diseases having mechanism of immunoglobulin E (IgE-dependent allergic reactions of the first type, the authors have studied in detail level of IgE and its link with other factors. Practically in all patients with pollinosis level of total IgE exceeded the norm. As a result of studies performed, it was established that high IgE level, presence of phagocytosis defect and prolong duration of illness are the criteria which affect disease progress, aggravation of patients’ state, less efficacy of treatment. Due to the fact that development of bronchial obstruction and transformation of pollinosis into bronchial asthma is the most topical issue nowadays, the authors studied its link with other factors and findings. It was established that risk of pollinosis transformation into pollen bronchial asthma increases in the presence of high level of total IgE, aggravation of allergologic anamnesis, decrease of forced expiration volume (FEV, significant duration of disease course. In the course of investigation it was revealed that the highest efficacy of treatment is noted in patients receiving allergen-specific therapy; this confirms data of world scientific literature. The best treatment results are observed in pollinosis patients, with aggravated family history not in parents but in grandparents.

  4. Evidence of Late Palaeocene-Early Eocene equatorial rain forest ...

    Indian Academy of Sciences (India)



    Nov 2, 2009 ... influx of CO2 during early Cenozoic times (Kent and Muttoni. 2008), besides ... Palaeocene – Eocene lignite and coal deposits of India. .... journey of the Indian subcontinent and massive outpouring ..... ice age (Plana 2004).

  5. Modes, tempo and spatial variability of Cenozoic cratonic denudation: morphoclimatic constraints from West Africa (United States)

    Beauvais, Anicet; Chardon, Dominique


    After the onset of Gondwana break-up in the Early Mesozoic, the emerged part of the African plate underwent long Greenhouse effect climatic periods and epeirogeny. The last Greenhouse effect period in the Early Cenozoic and the alternation of wet and dry climatic periods since the Eocene enhanced episodes of rock chemical weathering and laterite production, forming bauxites and ferricretes, interrupted by drier periods of dominantly mechanical denudation, shaping glacis [1]. In Sub-Saharan West Africa, this evolution resulted in pulsate and essentially climatically-forced denudation that has shaped an ubiquitous sequence of five stepped lateritic paleosurfaces that synchronously developed over Cenozoic times. The modes, timing and spatial variability of continental denudation of the region are investigated by combining geomorphologic and geochronological data sets. The geomorphologic data set comprises the altitudinal distribution of the lateritic paleosurfaces relicts and their differential elevation from 42 locations in Sub-Saharan West Africa where the sequence (or part of it) has been documented. The geochronological data set consists in the age ranges of each paleosurface tackled by radiometric 39Ar-40Ar dating of the neoformed oxy-hydroxides (i.e., cryptomelane, K1-2Mn8O16, nH2O, [4]) carried by their laterites at the Tambao reference site, Burkina Faso [1, 3]. Five groups of 39Ar-40Ar ages, ~ 59 - 45 Ma, ~ 29 - 24 Ma, ~ 18 - 11.5 Ma, ~ 7.2 - 5.8 Ma, and ~ 3.4 - 2.9 Ma, characterize periods of chemical weathering whereas the time laps between these groups of ages correspond to episodes of mechanical denudation that reflect physical shaping of the paleosurfaces. For the last 45 Ma, the denudation rate estimates (3 to 8 m Ma-1) are comparable with those derived on shorter time scale (103 to 106 y.) in the same region by the cosmogenic radionuclide method [2]. Combined with the geomorphologic data set, these age ranges allow the visualization of the regional

  6. Dynamic topography and the Cenozoic carbonate compensation depth (United States)

    Campbell, S. M.; Moucha, R.; Raymo, M. E.; Derry, L. A.


    The carbonate compensation depth (CCD), the ocean depth at which the calcium carbonate accumulation rate goes to zero, can provide valuable insight into climatic and weathering conditions over the Cenozoic. The paleoposition of the CCD can be inferred from sediment core data. As the carbonate accumulation rate decreases linearly with depth between the lysocline and CCD, the CCD can be calculated using a linear regression on multiple sediment cores with known carbonate accumulation rates and paleodepths. It is therefore vital to have well-constrained estimates of paleodepths. Paleodepths are typically calculated using models of thermal subsidence and sediment loading and compaction. However, viscous convection-related stresses in the mantle can warp the ocean floor by hundreds of meters over broad regions and can also vary significantly over millions of years. This contribution to paleobathymetry, termed dynamic topography, can be calculated by modeling mantle flow backwards in time. Herein, we demonstrate the effect dynamic topography has on the inference of the late Cenozoic CCD with an example from the equatorial Pacific, considering sites from IODP Expeditions 320/321. The equatorial Pacific, given its large size and high productivity, is closely tied to the global carbon cycle. Accordingly, long-term changes in the equatorial Pacific CCD can be considered to reflect global changes in weathering fluxes and the carbon cycle, in addition to more regional changes in productivity and thermohaline circulation. We find that, when the dynamic topography contribution to bathymetry is accounted for, the equatorial Pacific CCD is calculated to be appreciably shallower at 30 Ma than previous estimates would suggest, implying a greater deepening of the Pacific CCD over the late Cenozoic.

  7. Tectonic/climatic control on sediment provenance in the Cape Roberts Project core record (southern Victoria Land, Antarctica): A pulsing late Oligocene/early Miocene signal from south revealed by detrital thermochronology (United States)

    Olivetti, V.; Balestrieri, M. L.; Rossetti, F.; Talarico, F. M.


    The Mesozoic-Cenozoic West Antarctic Rift System (WARS) is one of the largest intracontinental rift on Earth. The Transantarctic Mountains (TAM) form its western shoulder, marking the boundary between the East and West Antarctica. The rifting evolution is commonly considered polyphase and involves an Early Cretaceous phase linked to the Gondwana break-up followed by a major Cenozoic one, starting at c. 50-40 Ma. This Cenozoic episode corresponds to the major uplift/denudation phase of the TAM, which occurred concurrently with transition from orthogonal to oblique rifting. The Cenozoic rift reorganization occurred concurrently with a major change in the global climate system and a global reorganization of plate motions. This area thus provide an outstanding natural laboratory for studying a range of geological problems that involve feedback relationships between tectonics and climate. A key to address the tectonic/climate feedback relations is to look on apparent synchronicity in erosion signal between different segments, and to compare these with well-dated regional and global climatic events. However, due to the paucity of Cenozoic rock sequences exposed along the TAM front, a few information is available about the neotectonics of the rift and rift-flank uplift system. The direct physical record of the tectonic/climate history of the WARS recovered by core drillings along the western margin of the Ross sea (DSDP, CIROS, Cape Roberts and ANDRILL projects) provides an invaluable tool to address this issue. Twenty-three samples distributed throughout the entire composite drill-cored stratigraphic succession of Cape Roberts were analyzed. Age probability plots of eighteen detrital samples with depositional ages between 34 Ma and the Pliocene were decomposed into statistically significant age populations or peaks using binomial peak-fitting. Moreover, three granitic pebbles, one dolerite clast and one sample of Beacon sandstones have been dated. From detrital samples

  8. Uranium and thorium in Cenozoic basaltods of Kamchatka

    International Nuclear Information System (INIS)

    Puzankov, Yu.M.


    Regularities in distribution of radioactive elements (RAE) in basaltoids of Kamchatka have been analyzed. The RAE concentration in samples was determined by γ-spectrometric method. The results compared with the instrumental neutron-activation analysis data are found to be in agreement. Results of evaluating the average contents of U, Th and roch-forming elements in ce-- nozoic basaltoids are presented. The radiogeochemical data enable to associate the origin of the Kamchatka Cenozoic basaltoids with both fractional melting of the upper mantle depleted of radioactive elements and the development of magmatic chambers in submerged blocks of the Pre-Cretaceous melanocratic basement the composition of which is close to oceanic tholeiite

  9. Multimodal MR-imaging reveals large-scale structural and functional connectivity changes in profound early blindness (United States)

    Bauer, Corinna M.; Hirsch, Gabriella V.; Zajac, Lauren; Koo, Bang-Bon; Collignon, Olivier


    In the setting of profound ocular blindness, numerous lines of evidence demonstrate the existence of dramatic anatomical and functional changes within the brain. However, previous studies based on a variety of distinct measures have often provided inconsistent findings. To help reconcile this issue, we used a multimodal magnetic resonance (MR)-based imaging approach to provide complementary structural and functional information regarding this neuroplastic reorganization. This included gray matter structural morphometry, high angular resolution diffusion imaging (HARDI) of white matter connectivity and integrity, and resting state functional connectivity MRI (rsfcMRI) analysis. When comparing the brains of early blind individuals to sighted controls, we found evidence of co-occurring decreases in cortical volume and cortical thickness within visual processing areas of the occipital and temporal cortices respectively. Increases in cortical volume in the early blind were evident within regions of parietal cortex. Investigating white matter connections using HARDI revealed patterns of increased and decreased connectivity when comparing both groups. In the blind, increased white matter connectivity (indexed by increased fiber number) was predominantly left-lateralized, including between frontal and temporal areas implicated with language processing. Decreases in structural connectivity were evident involving frontal and somatosensory regions as well as between occipital and cingulate cortices. Differences in white matter integrity (as indexed by quantitative anisotropy, or QA) were also in general agreement with observed pattern changes in the number of white matter fibers. Analysis of resting state sequences showed evidence of both increased and decreased functional connectivity in the blind compared to sighted controls. Specifically, increased connectivity was evident between temporal and inferior frontal areas. Decreases in functional connectivity were observed

  10. Feedbacks of lithosphere dynamics and environmental change of the Cenozoic West Antarctic Rift System.

    NARCIS (Netherlands)

    van der Wateren, F.M.; Cloetingh, S.A.P.L.


    This special issue of Global and Planetary Change contains 11 contributions dealing with various aspects of the Cenozoic West Antarctic Rift System. During the last two decades, investigations of the interplay of tectonics and climate greatly improved understanding of Cenozoic global change. Major

  11. Molecular imaging reveals elevated VEGFR-2 expression in retinal capillaries in diabetes: a novel biomarker for early diagnosis. (United States)

    Sun, Dawei; Nakao, Shintaro; Xie, Fang; Zandi, Souska; Bagheri, Abouzar; Kanavi, Mozhgan Rezaei; Samiei, Shahram; Soheili, Zahra-Soheila; Frimmel, Sonja; Zhang, Zhongyu; Ablonczy, Zsolt; Ahmadieh, Hamid; Hafezi-Moghadam, Ali


    Diabetic retinopathy (DR) is a microvascular complication of diabetes and a leading cause of vision loss. Biomarkers and methods for early diagnosis of DR are urgently needed. Using a new molecular imaging approach, we show up to 94% higher accumulation of custom designed imaging probes against vascular endothelial growth factor receptor 2 (VEGFR-2) in retinal and choroidal vessels of diabetic animals (P<0.01), compared to normal controls. More than 80% of the VEGFR-2 in the diabetic retina was in the capillaries, compared to 47% in normal controls (P<0.01). Angiography in rabbit retinas revealed microvascular capillaries to be the location for VEGF-A-induced leakage, as expressed by significantly higher rate of fluorophore spreading with VEGF-A injection when compared to vehicle control (26±2 vs. 3±1 μm/s, P<0.05). Immunohistochemistry showed VEGFR-2 expression in capillaries of diabetic animals but not in normal controls. Macular vessels from diabetic patients (n=7) showed significantly more VEGFR-2 compared to nondiabetic controls (n=5) or peripheral retinal regions of the same retinas (P<0.01 in both cases). Here we introduce a new approach for early diagnosis of DR and VEGFR-2 as a molecular marker. VEGFR-2 could become a key diagnostic target, one that might help to prevent retinal vascular leakage and proliferation in diabetic patients. © FASEB.

  12. Single-virus tracking approach to reveal the interaction of Dengue virus with autophagy during the early stage of infection (United States)

    Chu, Li-Wei; Huang, Yi-Lung; Lee, Jin-Hui; Huang, Long-Ying; Chen, Wei-Jun; Lin, Ya-Hsuan; Chen, Jyun-Yu; Xiang, Rui; Lee, Chau-Hwang; Ping, Yueh-Hsin


    Dengue virus (DENV) is one of the major infectious pathogens worldwide. DENV infection is a highly dynamic process. Currently, no antiviral drug is available for treating DENV-induced diseases since little is known regarding how the virus interacts with host cells during infection. Advanced molecular imaging technologies are powerful tools to understand the dynamics of intracellular interactions and molecular trafficking. This study exploited a single-virus particle tracking technology to address whether DENV interacts with autophagy machinery during the early stage of infection. Using confocal microscopy and three-dimensional image analysis, we showed that DENV triggered the formation of green fluorescence protein-fused microtubule-associated protein 1A/1B-light chain 3 (GFP-LC3) puncta, and DENV-induced autophagosomes engulfed DENV particles within 15-min postinfection. Moreover, single-virus particle tracking revealed that both DENV particles and autophagosomes traveled together during the viral infection. Finally, in the presence of autophagy suppressor 3-methyladenine, the replication of DENV was inhibited and the location of DENV particles spread in cytoplasma. In contrast, the numbers of newly synthesized DENV were elevated and the co-localization of DENV particles and autophagosomes was detected while the cells were treated with autophagy inducer rapamycin. Taken together, we propose that DENV particles interact with autophagosomes at the early stage of viral infection, which promotes the replication of DENV.

  13. Late Cenozoic Paleoceanography of the Central Arctic Ocean

    International Nuclear Information System (INIS)

    O'Regan, Matt


    The Arctic Ocean is the smallest and perhaps least accessible of the worlds oceans. It occupies only 26% of the global ocean area, and less than 10% of its volume. However, it exerts a disproportionately large influence on the global climate system through a complex set of positive and negative feedback mechanisms directly or indirectly related to terrestrial ice and snow cover and sea ice. Increasingly, the northern high latitude cryosphere is seen as an exceptionally fragile part of the global climate system, a fact exemplified by observed reductions in sea ice extent during the past decades [2]. The paleoceanographic evolution of the Arctic Ocean can provide important insights into the physical forcing mechanisms that affect the form, intensity and permanence of ice in the high Arctic, and its sensitivity to these mechanisms in vastly different climate states of the past. However, marine records capturing the late Cenozoic paleoceanography of the Arctic are limited - most notably because only a single deep borehole exists from the central parts of this Ocean. This paper reviews the principal late Cenozoic (Neogene/Quaternary) results from the Arctic Coring Expedition to the Lomonosov Ridge and in light of recent data and observations on modern sea ice, outlines emerging questions related to three main themes: 1) the establishment of the 'modern' Arctic Ocean and the opening of the Fram Strait 2) the inception of perennial sea ice 3) The Quaternary intensification of Northern Hemisphere glaciations.

  14. A coccolithophore concept for constraining the Cenozoic carbon cycle (United States)

    Henderiks, J.; Rickaby, R. E. M.


    An urgent question for future climate, in light of increased burning of fossil fuels, is the temperature sensitivity of the climate system to atmospheric carbon dioxide (pCO>sub>2). To date, no direct proxy for past levels of pCO2 exists beyond the reach of the polar ice core records. We propose a new methodology for placing a constraint on pCO2 over the Cenozoic based on the physiological plasticity of extant coccolithophores. Specifically, our premise is that the contrasting calcification tolerance of various extant species of coccolithophore to raised pCO2 reflects an "evolutionary memory" of past atmospheric composition. The different times of evolution of certain morphospecies allows an upper constraint of past pCO2 to be placed on Cenozoic timeslices. Further, our hypothesis has implications for the response of marine calcifiers to ocean acidification. Geologically "ancient" species, which have survived large changes in ocean chemistry, are likely more resilient to predicted acidification.

  15. Preliminary Depositional and Provenance Records of Mesozoic Basin Evolution and Cenozoic Shortening in the High Andes, La Ramada Fold-Thrust Belt, Southern-Central Andes (32-33°S) (United States)

    Mackaman-Lofland, C.; Horton, B. K.; Fuentes, F.; Constenius, K. N.; McKenzie, R.; Alvarado, P. M.


    The Argentinian Andes define key examples of retroarc shortening and basin evolution above a zone of active subduction. The La Ramada fold-thrust belt (RFTB) in the High Andes provides insights into the relative influence and temporal records of diverse convergent margin processes (e.g. flat-slab subduction, convergent wedge dynamics, structural inversion). The RFTB contains Mesozoic extensional basin strata deformed by later Andean shortening. New detrital zircon U-Pb analyses of Mesozoic rift sediments reveal: (1) a dominant Permo-Triassic age signature (220-280 Ma) associated with proximal sources of effective basement (Choiyoi Group) during Triassic synrift deposition; (2) upsection younging of maximum depositional ages from Late Triassic through Early Cretaceous (230 to 100 Ma) with the increasing influence of western Andean arc sources; and (3) a significant Late Cretaceous influx of Paleozoic (~350-550 Ma) and Proterozoic (~650-1300 Ma) populations during the earliest shift from back-arc post-extensional subsidence to upper-plate shortening. The Cenozoic detrital record of the Manantiales foreland basin (between the Frontal Cordillera and Precordillera) records RFTB deformation prior to flat-slab subduction. A Permo-Triassic Choiyoi age signature dominates the Miocene succession, consistent with sources in the proximal Espinacito range. Subordinate Mesozoic (~80-250 Ma) to Proterozoic (~850-1800 Ma) U-Pb populations record exhumation of the Andean magmatic arc and recycling of different structural levels in the RFTB during thrusting/inversion of Mesozoic rift basin strata and subjacent Paleozoic units. Whereas maximum depositional ages of sampled Manantiales units cluster at 18-20 Ma, the Estancia Uspallata basin (~50 km to the south) shows consistent upsection younging of Cenozoic populations attributed to proximal volcanic centers. Ongoing work will apply low-temperature thermochronology to pinpoint basin accumulation histories and thrust timing.

  16. Radiolarians decreased silicification as an evolutionary response to reduced Cenozoic ocean silica availability. (United States)

    Lazarus, David B; Kotrc, Benjamin; Wulf, Gerwin; Schmidt, Daniela N


    It has been hypothesized that increased water column stratification has been an abiotic "universal driver" affecting average cell size in Cenozoic marine plankton. Gradually decreasing Cenozoic radiolarian shell weight, by contrast, suggests that competition for dissolved silica, a shared nutrient, resulted in biologic coevolution between radiolaria and marine diatoms, which expanded dramatically in the Cenozoic. We present data on the 2 components of shell weight change--size and silicification--of Cenozoic radiolarians. In low latitudes, increasing Cenozoic export of silica to deep waters by diatoms and decreasing nutrient upwelling from increased water column stratification have created modern silica-poor surface waters. Here, radiolarian silicification decreases significantly (r = 0.91, P stratification and abundance of diatoms. In high southern latitudes, Southern Ocean circulation, present since the late Eocene, maintains significant surface water silica availability. Here, radiolarian silicification decreased insignificantly (r = 0.58, P = 0.1), from approximately 0.13 at 35 Ma to 0.11 today. Trends in shell size in both time series are statistically insignificant and are not correlated with each other. We conclude that there is no universal driver changing cell size in Cenozoic marine plankton. Furthermore, biologic and physical factors have, in concert, by reducing silica availability in surface waters, forced macroevolutionary changes in Cenozoic low-latitude radiolarians.

  17. Genesis of Cenozoic intraplate high Mg# andesites in Northeast China (United States)

    Liu, J. Q.; Chen, L. H.; Zhong, Y.; Wang, X. J.


    High-Mg# andesites (HMAs) are usually generated in the converged plate boundary and have genetic relationships with slab subduction. However, it still remained controversial about the origin of those HMAs erupted in the intra-plate setting. Here we present major, trace element, and Sr-Nd-Pb-Hf isotopic compositions for the Cenozoic intra-plate HMAs from Northeast China to constrain their origin and formation process. Cenozoic Xunke volcanic rocks are located in the northern Lesser Khingan Range, covering an area of about 3, 000 km2. These volcanic rocks are mainly basaltic andesite and basaltic trachyandesite, with only several classified as trachyandesite and andesites. They have high SiO2 contents (54.3-57.4 wt%) and Mg# (49.6-57.8), falling into the scope of high Mg# andesites. The Xunke HMAs are enriched in large ion lithophile elements but depleted in high field strength elements, with positive Ba, K, Sr and negative Zr-Hf, and Ti anomalies. Their trace element absolute concentrations are between those of potassic basalts and Wuchagou HMAs. The Xunke HMAs have relatively enriched Sr-Nd-Hf isotopes (87Sr/86Sr = 0.705398-0.705764, ɛNd=-8.8-3.8, ɛHf=0.5-11.7), and low radiogenic Pb isotopes (206Pb/204Pb = 16.701-17.198), towards to the EM1 end-member, which indicates that they are ultimately derived from ancient, recycled crustal components. Primitive silica-rich melts were generated from higher degrees of partial melting of recycled crustal materials (relative to potassic basalts) and then interacted with the peridotite to produce the Xunke HMAs.

  18. Fires in the Cenozoic: a late flowering of flammable ecosystems

    Directory of Open Access Journals (Sweden)

    William John Bond


    Full Text Available Modern flammable ecosystems include tropical and subtropical savannas, steppe grasslands, boreal forests and temperate sclerophyll shrublands. Despite the apparent fiery nature of much contemporary vegetation, terrestrial fossil evidence would suggest we live in a time of low fire activity relative to the deep past. The inertinite content of coal, fossil charcoal, is strikingly low from the Eocene to the Pleistocene and no charcoalified mesofossils have been reported for the Cenozoic. Marine cores have been analysed for charcoal in the North Pacific, the north and south Atlantic off Africa, and the south China sea. These tell a different story with the oldest records indicating low levels of fire activity from the Eocene but a surge of fire from the late Miocene (~7 Ma. Phylogenetic studies of woody plants adapted to frequent savanna fires show them beginning to appear from the Late Miocene with peak origins in the late Pliocene in both South American and African lineages. Phylogenetic studies indicate ancient origins (60 Ma+ for clades characteristic of flammable sclerophyll vegetation from Australia and the Cape region of South Africa. However, as for savannas, there was a surge of speciation from the Late Miocene associated with the retreat of closed fire-intolerant forests. The wide geographic spread of increased fire activity in the last few million years suggests a global cause. However none of the potential global factors (oxygen, rainfall seasonality, CO2 , novel flammable growth forms provides an adequate explanation as yet. The global patterns and processes of fire and flammable vegetation in the Cenozoic, especially since the Late Miocene, deserve much more attention to better understand fire in the earth system.

  19. Fires in the Cenozoic: a late flowering of flammable ecosystems. (United States)

    Bond, William J


    Modern flammable ecosystems include tropical and subtropical savannas, steppe grasslands, boreal forests, and temperate sclerophyll shrublands. Despite the apparent fiery nature of much contemporary vegetation, terrestrial fossil evidence would suggest we live in a time of low fire activity relative to the deep past. The inertinite content of coal, fossil charcoal, is strikingly low from the Eocene to the Pleistocene and no charcoalified mesofossils have been reported for the Cenozoic. Marine cores have been analyzed for charcoal in the North Pacific, the north and south Atlantic off Africa, and the south China sea. These tell a different story with the oldest records indicating low levels of fire activity from the Eocene but a surge of fire from the late Miocene (~7 Ma). Phylogenetic studies of woody plants adapted to frequent savanna fires show them beginning to appear from the Late Miocene with peak origins in the late Pliocene in both South American and African lineages. Phylogenetic studies indicate ancient origins (60 Ma+) for clades characteristic of flammable sclerophyll vegetation from Australia and the Cape region of South Africa. However, as for savannas, there was a surge of speciation from the Late Miocene associated with the retreat of closed fire-intolerant forests. The wide geographic spread of increased fire activity in the last few million years suggests a global cause. However, none of the potential global factors (oxygen, rainfall seasonality, CO2, novel flammable growth forms) provides an adequate explanation as yet. The global patterns and processes of fire and flammable vegetation in the Cenozoic, especially since the Late Miocene, deserve much more attention to better understand fire in the earth system.

  20. Sulfur Geochemistry of a Lacustrine Record from Taiwan Reveals Enhanced Marine Aerosol Input during the Early Holocene. (United States)

    Ding, Xiaodong; Li, Dawei; Zheng, Liwei; Bao, Hongyan; Chen, Huei-Fen; Kao, Shuh-Ji


    Lacustrine record of marine aerosol input has rarely been documented. Here, we present the sulfur geochemistry during the last deglaciation and early Holocene of a sediment core retrieved from the Dongyuan Lake in southern Taiwan. An unusually high sulfur peak accompanying pyrite presence is observed at 10.5 ka BP. Such high sulfur content in lacustrine record is unusual. The δ 34 S of sulfur varied from +9.5 to + 17.1‰ with two significant positive shifts at 10.5 and 9.4 ka BP. The sources of sulfur and potential processes involving the sulfur isotope variation including bacterial sulfate reduction, volcanic emissions, in-catchment sulfide oxidation and marine aerosol input are discussed. Enhanced marine aerosol input is the most likely explanation for such sulfur peaks and δ 34 S shifts. The positive δ 34 S shifts appeared concurrently with the maximum landslide events over Taiwan resulted from enhanced typhoon activities. The synchronicity among records suggests that increased typhoon activities promoted sea spray, and consequently enhanced the marine aerosol input with 34 S-enriched sulfate. Our sulfur geochemistry data revealed sea spray history and marine influence onto terrestrial environment at coastal regions. Wider coverage of spatial-temporal lacustrine sulfur geochemistry record is needed to validate the applicability of sulfur proxy in paleoenvironmental research.

  1. History of oceanic front development in the New Zealand sector of the Southern Ocean during the Cenozoic: a synthesis

    International Nuclear Information System (INIS)

    Nelson, C.S.; Cooke, P.J.


    The New Zealand sector of the Southern Ocean (NZSSO) has opened about the Indian-Pacific spreading ridge throughout the Cenozoic. Today the NZSSO is characterised by broad zonal belts of antarctic (cold), subantarctic (cool), and subtropical (warm) surface-water masses separated by prominent oceanic fronts: the Subtropical Front (STF) c. 43 degrees S, Subantarctic Front (SAF) c. 50 degrees S, and Antarctic Polar Front (AAPF) c. 60 degrees S. Despite a meagre database, the broad pattern of Cenozoic evolution of these fronts is reviewed from the results of Deep Sea Drilling Project-based studies of sediment facies, microfossil assemblages and diversity, and stable isotope records, as well as from evidence in onland New Zealand Cenozoic sequences. Results are depicted schematically on seven paleogeographic maps covering the NZSSO at 10 m.y. intervals through the Cenozoic. During the Paleocene and most of the Eocene (65-35 Ma), the entire NZSSO was under the influence of warm to cool subtropical waters, with no detectable oceanic fronts. In the latest Eocene (c. 35 Ma), a proto-STF is shown separating subantarctic and subtropical waters offshore from Antarctica, near 65 degrees S paleolatitude. During the earliest Oligocene, this front was displaced northwards by development of an AAPF following major global cooling and biotic turnover associated with ice sheet expansion to sea level on East Antarctica. Early Oligocene full opening (c. 31 Ma) of the Tasmanian gateway initiated vigorous proto-circum-Antarctic flow of cold/cool waters, possibly through a West Antarctic seaway linking the southern Pacific and Atlantic Oceans, including detached northwards 'jetting' onto the New Zealand plateau where condensation and unconformity development was widespread in cool-water carbonate facies. Since this time, a broad tripartite division of antarctic, subantarctic, and subtropical waters has existed in the NZSSO, including possible development of a proto-SAF within the

  2. Equatorial heat accumulation as a long-term trigger of permanent Antarctic ice sheets during the Cenozoic. (United States)

    Tremblin, Maxime; Hermoso, Michaël; Minoletti, Fabrice


    Growth of the first permanent Antarctic ice sheets at the Eocene-Oligocene Transition (EOT), ∼33.7 million years ago, indicates a major climate shift within long-term Cenozoic cooling. The driving mechanisms that set the stage for this glaciation event are not well constrained, however, owing to large uncertainties in temperature reconstructions during the Eocene, especially at lower latitudes. To address this deficiency, we used recent developments in coccolith biogeochemistry to reconstruct equatorial Atlantic sea surface temperature (SST) and atmospheric pCO 2 values from pelagic sequences preceding and spanning the EOT. We found significantly more variability in equatorial SSTs than previously reported, with pronounced cooling from the Early to Middle Eocene and subsequent warming during the Late Eocene. Thus, we show that the Antarctic glaciation at the Eocene-Oligocene boundary was preceded by a period of heat accumulation in the low latitudes, likely focused in a progressively contracting South Atlantic gyre, which contributed to cooling high-latitude austral regions. This prominent redistribution of heat corresponds to the emplacement of a strong meridional temperature gradient that typifies icehouse climate conditions. Our equatorial coccolith-derived geochemical record thus highlights an important period of global climatic and oceanic upheaval, which began 4 million years before the EOT and, superimposed on a long-term pCO 2 decline, drove the Earth system toward a glacial tipping point in the Cenozoic.

  3. Cenozoic North American Drainage Basin Evolution, Sediment Yield, and Accumulation in the Gulf of Mexico Basin (United States)

    Galloway, W.; Ganey-Curry, P. E.


    The Cenozoic fill of the Gulf of Mexico basin contains a continuous record of sediment supply from the North American continental interior for the past 65 million years. Regional mapping of unit thickness and paleogeography for 18 depositional episodes defines patterns of shifting entry points of continental fluvial systems and quantifies the total volume of sediment supplied during each episode. Eight fluvio-deltaic depocenters, named for geographic similarities to entry points and drainage basins of modern rivers, are present. From southwest to northeast, they are the Rio Bravo, Rio Grande, Guadalupe, Colorado, Houston-Brazos, Red, Mississippi, and Tennessee axes. Sediment volume was calculated from hand-contoured unit thickness maps compiled from basin-wide well and seismic control. Using a GIS algorithm to sum volumes within polygons bounding interpreted North American river contribution, the total extant volume was then calculated. General compaction factors were used to convert modern volume to quantitative approximations of total grain volume. Grain volume rate of supply for each depositional episode was then calculated. Values vary by more than an order of magnitude. Supply rate has commonly varied by two-fold or more between successive depositional episodes. Sediment supply is a significant, independent variable in development of stratigraphic sequences within the Gulf basin. Paleogeographic maps of the continental interior for eleven Cenozoic time intervals display the evolving and complex interplay of intracontinental tectonism, climate change, and drainage basin evolution. Five tectono-climatic eras are differentiated: Paleocene late Laramide era; early to middle Eocene terminal Laramide era; middle Cenozoic (Late Eocene—Early Miocene) dry, volcanogenic era; middle Neogene (Middle—Late Miocene) arid, extensional era; and late Neogene (Plio—Pleistocene) monsoonal, epeirogenic uplift era. Sediment supply to the GOM reflects the interplay of (1

  4. Determination of Cenozoic sedimentary structures using integrated geophysical surveys: A case study in the Barkol Basin, Xinjiang, China (United States)

    Sun, Kai; Chen, Chao; Du, Jinsong; Wang, Limin; Lei, Binhua


    Thickness estimation of sedimentary basin is a complex geological problem, especially in an orogenic environment. Intense and multiple tectonic movements and climate changes result in inhomogeneity of sedimentary layers and basement configurations, which making sedimentary structure modelling difficult. In this study, integrated geophysical methods, including gravity, magnetotelluric (MT) sounding and electrical resistivity tomography (ERT), were used to estimate basement relief to understand the geological structure and evolution of the eastern Barkol Basin in China. This basin formed with the uplift of the eastern Tianshan during the Cenozoic. Gravity anomaly map revealed the framework of the entire area, and ERT as well as MT sections reflected the geoelectric features of the Cenozoic two-layer distribution. Therefore, gravity data, constrained by MT, ERT and boreholes, were utilized to estimate the spatial distribution of the Quaternary layer. The gravity effect of the Quaternary layer related to the Tertiary layer was later subtracted to obtain the residual anomaly for inversion. For the Tertiary layer, the study area was divided into several parts because of lateral difference of density contrasts. Gravity data were interpreted to determine the density contrast constrained by the MT results. The basement relief can be verified by geological investigation, including the uplift process and regional tectonic setting. The agreement between geophysical survey and prior information from geology emphasizes the importance of integrated geophysical survey as a complementary means of geological studies in this region.

  5. The complete mitochondrial genome of Pauropus longiramus (Myriapoda: Pauropoda): implications on early diversification of the myriapods revealed from comparative analysis. (United States)

    Dong, Yan; Sun, Hongying; Guo, Hua; Pan, Da; Qian, Changyuan; Hao, Sijing; Zhou, Kaiya


    Myriapods are among the earliest arthropods and may have evolved to become part of the terrestrial biota more than 400 million years ago. A noticeable lack of mitochondrial genome data from Pauropoda hampers phylogenetic and evolutionary studies within the subphylum Myriapoda. We sequenced the first complete mitochondrial genome of a microscopic pauropod, Pauropus longiramus (Arthropoda: Myriapoda), and conducted comprehensive mitogenomic analyses across the Myriapoda. The pauropod mitochondrial genome is a circular molecule of 14,487 bp long and contains the entire set of thirty-seven genes. Frequent intergenic overlaps occurred between adjacent tRNAs, and between tRNA and protein-coding genes. This is the first example of a mitochondrial genome with multiple intergenic overlaps and reveals a strategy for arthropods to effectively compact the mitochondrial genome by overlapping and truncating tRNA genes with neighbor genes, instead of only truncating tRNAs. Phylogenetic analyses based on protein-coding genes provide strong evidence that the sister group of Pauropoda is Symphyla. Additionally, approximately unbiased (AU) tests strongly support the Progoneata and confirm the basal position of Chilopoda in Myriapoda. This study provides an estimation of myriapod origins around 555 Ma (95% CI: 444-704 Ma) and this date is comparable with that of the Cambrian explosion and candidate myriapod-like fossils. A new time-scale suggests that deep radiations during early myriapod diversification occurred at least three times, not once as previously proposed. A Carboniferous origin of pauropods is congruent with the idea that these taxa are derived, rather than basal, progoneatans. Copyright © 2012 Elsevier B.V. All rights reserved.

  6. The early asthmatic response is associated with glycolysis, calcium binding and mitochondria activity as revealed by proteomic analysis in rats

    Directory of Open Access Journals (Sweden)

    Xu Yu-Dong


    Full Text Available Abstract Background The inhalation of allergens by allergic asthmatics results in the early asthmatic response (EAR, which is characterized by acute airway obstruction beginning within a few minutes. The EAR is the earliest indicator of the pathological progression of allergic asthma. Because the molecular mechanism underlying the EAR is not fully defined, this study will contribute to a better understanding of asthma. Methods In order to gain insight into the molecular basis of the EAR, we examined changes in protein expression patterns in the lung tissue of asthmatic rats during the EAR using 2-DE/MS-based proteomic techniques. Bioinformatic analysis of the proteomic data was then performed using PPI Spider and KEGG Spider to investigate the underlying molecular mechanism. Results In total, 44 differentially expressed protein spots were detected in the 2-DE gels. Of these 44 protein spots, 42 corresponded to 36 unique proteins successfully identified using mass spectrometry. During subsequent bioinformatic analysis, the gene ontology classification, the protein-protein interaction networking and the biological pathway exploration demonstrated that the identified proteins were mainly involved in glycolysis, calcium binding and mitochondrial activity. Using western blot and semi-quantitative RT-PCR, we confirmed the changes in expression of five selected proteins, which further supports our proteomic and bioinformatic analyses. Conclusions Our results reveal that the allergen-induced EAR in asthmatic rats is associated with glycolysis, calcium binding and mitochondrial activity, which could establish a functional network in which calcium binding may play a central role in promoting the progression of asthma.

  7. Multiple Polyploidization Events across Asteraceae with Two Nested Events in the Early History Revealed by Nuclear Phylogenomics. (United States)

    Huang, Chien-Hsun; Zhang, Caifei; Liu, Mian; Hu, Yi; Gao, Tiangang; Qi, Ji; Ma, Hong


    Biodiversity results from multiple evolutionary mechanisms, including genetic variation and natural selection. Whole-genome duplications (WGDs), or polyploidizations, provide opportunities for large-scale genetic modifications. Many evolutionarily successful lineages, including angiosperms and vertebrates, are ancient polyploids, suggesting that WGDs are a driving force in evolution. However, this hypothesis is challenged by the observed lower speciation and higher extinction rates of recently formed polyploids than diploids. Asteraceae includes about 10% of angiosperm species, is thus undoubtedly one of the most successful lineages and paleopolyploidization was suggested early in this family using a small number of datasets. Here, we used genes from 64 new transcriptome datasets and others to reconstruct a robust Asteraceae phylogeny, covering 73 species from 18 tribes in six subfamilies. We estimated their divergence times and further identified multiple potential ancient WGDs within several tribes and shared by the Heliantheae alliance, core Asteraceae (Asteroideae-Mutisioideae), and also with the sister family Calyceraceae. For two of the WGD events, there were subsequent great increases in biodiversity; the older one proceeded the divergence of at least 10 subfamilies within 10 My, with great variation in morphology and physiology, whereas the other was followed by extremely high species richness in the Heliantheae alliance clade. Our results provide different evidence for several WGDs in Asteraceae and reveal distinct association among WGD events, dramatic changes in environment and species radiations, providing a possible scenario for polyploids to overcome the disadvantages of WGDs and to evolve into lineages with high biodiversity. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  8. Segment polarity gene expression in a myriapod reveals conserved and diverged aspects of early head patterning in arthropods. (United States)

    Janssen, Ralf


    Arthropods show two kinds of developmental mode. In the so-called long germ developmental mode (as exemplified by the fly Drosophila), all segments are formed almost simultaneously from a preexisting field of cells. In contrast, in the so-called short germ developmental mode (as exemplified by the vast majority of arthropods), only the anterior segments are patterned similarly as in Drosophila, and posterior segments are added in a single or double segmental periodicity from a posterior segment addition zone (SAZ). The addition of segments from the SAZ is controlled by dynamic waves of gene activity. Recent studies on a spider have revealed that a similar dynamic process, involving expression of the segment polarity gene (SPG) hedgehog (hh), is involved in the formation of the anterior head segments. The present study shows that in the myriapod Glomeris marginata the early expression of hh is also in a broad anterior domain, but this domain corresponds only to the ocular and antennal segment. It does not, like in spiders, represent expression in the posterior adjacent segment. In contrast, the anterior hh pattern is conserved in Glomeris and insects. All investigated myriapod SPGs and associated factors are expressed with delay in the premandibular (tritocerebral) segment. This delay is exclusively found in insects and myriapods, but not in chelicerates, crustaceans and onychophorans. Therefore, it may represent a synapomorphy uniting insects and myriapods (Atelocerata hypothesis), contradicting the leading opinion that suggests a sister relationship of crustaceans and insects (Pancrustacea hypothesis). In Glomeris embryos, the SPG engrailed is first expressed in the mandibular segment. This feature is conserved in representatives of all arthropod classes suggesting that the mandibular segment may have a special function in anterior patterning.

  9. Types of Cenozoic Mollusca from Java in the Martin Collection of Naturalis

    NARCIS (Netherlands)

    Leloux, J.; Wesselingh, F.P.


    An updated type catalogue of the Martin Collection (fossil Mollusca, predominantly from the Cenozoic of Java, Indonesia) is presented. Type specimen data, updated locality data, and illustrations are given.

  10. 3-D thermal effect of late Cenozoic erosion and deposition within the Lofoten-Vesterålen segment of the Mid-Norwegian continental margin (United States)

    Maystrenko, Yuriy Petrovich; Gernigon, Laurent; Olesen, Odleiv; Ottesen, Dag; Rise, Leif


    A 3-D subsurface temperature distribution within the Lofoten-Vesterålen segment of the Mid-Norwegian continental margin and adjacent areas has been studied to understand the thermal effect of late Cenozoic erosion of old sedimentary and crystalline rocks and subsequent deposition of glacial sediments during the Pleistocene. A lithosphere-scale 3-D structural model of the Lofoten-Vesterålen area has been used as a realistic approximation of the geometries of the sedimentary infill, underlying crystalline crust and lithospheric mantle during the 3-D thermal modelling. The influence of late Cenozoic erosion and sedimentation has been included during the 3-D thermal calculations. In addition, the 3-D thermal modelling has been carried out by taking also into account the influence of early Cenozoic continental breakup. The results of the 3-D thermal modelling demonstrate that the mainland is generally colder than the basin areas within the upper part of the 3-D model. The thermal influence of the early Cenozoic breakup is still clearly recognizable within the western and deep parts of the Lofoten-Vesterålen margin segment in terms of the increased temperatures. The thermal effects of the erosion and deposition within the study area also indicate that a positive thermal anomaly exists within the specific subareas where sedimentary and crystalline rocks were eroded. A negative thermal effect occurs in the subareas affected by subsidence and sedimentation. The erosion-related positive thermal anomaly reaches its maximum of more than +27 °C at depths of 17-22 km beneath the eastern part of the Vestfjorden Basin. The most pronounced deposition-related negative anomaly shows a minimum of around -70 °C at 17-20 km depth beneath the Lofoten Basin. The second negative anomaly is located within the northeastern part of the Vøring Basin and has minimal values of around -48 °C at 12-14 km depth. These prominent thermal anomalies are associated with the subareas where

  11. Late Cretaceous and Cenozoic exhumation history of the Malay Peninsula (United States)

    François, Thomas; Daanen, Twan; Matenco, Liviu; Willingshofer, Ernst; van der Wal, Jorien


    The evolution of Peninsular Malaysia up to the collisional period in the Triassic is well described but the evolution since the collision between Indochina and the Sukhothai Arc in Triassic times is less well described in the literature. The processes affecting Peninsular Malaysia during the Jurassic up to current day times have to explain the emplacement multiple intrusions (the Stong Complex, and the Kemahang granite), the Jurassic/Cretaceous onland basins, the Cenozoic offshore basins, and the asymmetric extension, which caused the exhumation of Taku Schists dome. The orogenic period in Permo-Triassic times, which also formed the Bentong-Raub suture zone, resulted in thickening of the continental crust of current day Peninsular Malaysia due to the collision of the Indochina continental block and the Sukhothai Arc, and is related to the subduction of oceanic crust once present between these continental blocks. The Jurassic/Cretaceous is a period of extension, resulting in the onland Jurassic/Cretaceous basins, synchronous melting of the crust, resulting in the emplacement Stong Complex and the Kemahang granite and thinning of the continental crust on the scale of the Peninsular, followed by uplift of the Peninsular. Different models can explain these observations: continental root removal, oceanic slab detachment, or slab delamination. These models all describe the melting of the lower crust due to asthenospheric upwelling, resulting in uplift and subsequent extension either due to mantle convective movements or gravitational instabilities related to uplift. The Cenozoic period is dominated by extension and rapid exhumation in the area as documented by low temperature thermocrological ages The extension in this period is most likely related to the subduction, which resumed at 45 Ma, of the Australian plate beneath the Eurasian plate after it terminated in Cretaceous times due to the collision of an Australian microcontinental fragment with the Sunda margin in the

  12. Characteristics of juvenile survivors reveal spatio-temporal differences in early life stage survival of Baltic cod

    DEFF Research Database (Denmark)

    Huwer, Bastian; Hinrichsen, H.H.; Böttcher, U.


    with previous modeling studies on the survival chances of early-stage larvae and with general spatio-temporal patterns of larval prey availability suggests that differences in survival are related to food availability during the early larval stage. Results are discussed in relation to the recruitment process...

  13. Estimates of late Cenozoic climate change relevant to Earth surface processes in tectonically active orogens (United States)

    Mutz, Sebastian G.; Ehlers, Todd A.; Werner, Martin; Lohmann, Gerrit; Stepanek, Christian; Li, Jingmin


    LGM reveal satisfactory to good performance of the model in reproducing precipitation changes, although in some cases discrepancies between neighbouring proxy observations highlight contradictions between proxy observations themselves. Finally, we document regions where the largest magnitudes of late Cenozoic changes in precipitation and temperature occur and offer the highest potential for future observational studies that quantify the impact of climate change on denudation and weathering rates.

  14. Cenozoic geology of the Yolomécatl-Tlaxiaco area, Northwestern Oaxaca, Southeastern Mexico: Stratigraphy, structure and regional significance (United States)

    Ferrusquía-Villafranca, Ismael; Ruiz-González, José E.; Torres-Hernández, José Ramón; Anderson, Thomas H.; Urrutia-Fucugauchi, Jaime; Martínez-Hernández, Enrique; García-Villegas, Felipe


    The Yolomécatl-Tlaxiaco Area, lies in the rugged Sierra Madre del Sur (SMS) of northwestern Oaxaca (YOTLA), southeastern Mexico. Within the area Cenozoic units unconformably overlie metamorphic, clastic and carbonate rock units of Late Paleozoic to Cretaceous ages as well as the Mixteco/Oaxaca Terrane boundary. The Cenozoic sequence, emphasized herein, includes from botton to top: (1) basal, calcilithitic Early Tertiary Tamazulapam Conglomerate, (2) andesitic lava flows of Nduayaco "Group," (3-4) Epiclastic/pyroclastic strata composing Yolomécatl Formation (∼40.3 ± 1.0 Ma), and Tayata Pyroepiclastics (5) Early Oligocene (∼32.9 Ma), felsic, pyroclastic Nundichi "Group," (6) Late Oligocene (∼27.7 ± 0.7 Ma) andesitic lava flows of Nicananduta "Group" containing intercalations of unit (7) ?Chilapa Formation (largely lacustrine). Quaternary deposits unconformably overlie the sequence. The structural record includes NNW-SSE folds in the Mesozoic units, and one in Tayata Pyroepiclastics, as well as numerous fractures/faults of diverse types, whose pattern seems to roughly define four geographic/structural domains, NW, SW, S, and E. The Tertiary sequence records four magmatic and six deformational events: Pre-Late Eocene Extension accommodated by the Tamazulapam fault, along which magma of the Nduayaco "Group" moved upward. The next episode is the earliest Late Eocene extension recorded by the Yucuxaco-Santa Cruz Tayata fault was followed by accumulation of Yolomécatl Formation, Tayata Pyroepiclastics, and synsedimentary emplacement of tuff sheets at ∼40.3 ± 1.0 Ma. After this date, left lateral transpression emplaced a Teposcolula Limestone block over Nduayaco "Group" and ?Yolomécatl Formation, whereas the Tayata Pyroepiclastics was folded into an open anticline. Movement along the Yucuxaco-Santa Cruz Tayayata fault suite influenced accumulation of the Nundichi "Group" strata ca. ∼32.9 Ma. Subsequent ENE-WSW extension affected the Nundichi "Group," partly

  15. Mass Balance of Cenozoic Andes-Amazon Source to Sink System—Marañón Basin, Peru

    Directory of Open Access Journals (Sweden)

    Gérôme Calvès


    Full Text Available We investigate the mass balance of the Cenozoic Andes-Amazon source to sink system using rock uplift proxies and solid sedimentation of the Marañón Basin in Peru. The evolution of sedimentation rates is calibrated with regional structural restored cross-section. The quantification of eroded sediments from reliefs to sedimentary basin is achieved with ×10 Myr resolution and compared to present day proxies from the HYBAM (HYdrologie et Biogéochimie du Bassin Amazonien Critical Zone Observatory. Erosion of the early Andean landforms started during the Upper Mesozoic period, but sediment rates significantly increase during the Neogene. This is in agreement with the calibrated increase of rock uplift in the Andean orogenic belt.

  16. Glacial removal of late Cenozoic subglacially emplaced volcanic edifices by the West Antarctic ice sheet (United States)

    Behrendt, John C.; Blankenship, D.D.; Damaske, D.; Cooper, A. K.


    Local maxima of the horizontal gradient of pseudogravity from closely spaced aeromagnetic surveys over the Ross Sea, northwestern Ross Ice Shelf, and the West Antarctic ice sheet, reveal a linear magnetic rift fabric and numerous subcircular, high-amplitude anomalies. Geophysical data indicate two or three youthful volcanic edifices at widely separated areas beneath the sea and ice cover in the West Antarctic rift system. In contrast, we suggest glacial removal of edifices of volcanic sources of many more anomalies. Magnetic models, controlled by marine seismic reflection and radar ice-sounding data, allow us to infer that glacial removal of the associated late Cenozoic volcanic edifices (probably debris, comprising pillow breccias, and hyaloclastites) has occurred essentially concomitantly with their subglacial eruption. "Removal' of unconsolidated volcanic debris erupted beneath the ice is probably a more appropriate term than "erosion', given its fragmented, ice-contact origin. The exposed volcanoes may have been protected from erosion by the surrounding ice sheet because of more competent rock or high elevation above the ice sheet. -from Authors

  17. Cenozoic mountain building on the northeastern Tibetan Plateau (United States)

    Lease, Richard O.


    Northeastern Tibetan Plateau growth illuminates the kinematics, geodynamics, and climatic consequences of large-scale orogenesis, yet only recently have data become available to outline the spatiotemporal pattern and rates of this growth. I review the tectonic history of range growth across the plateau margin north of the Kunlun fault (35°–40°N) and east of the Qaidam basin (98°–107°E), synthesizing records from fault-bounded mountain ranges and adjacent sedimentary basins. Deformation began in Eocene time shortly after India-Asia collision, but the northeastern orogen boundary has largely remained stationary since this time. Widespread middle Miocene–Holocene range growth is portrayed by accelerated deformation, uplift, erosion, and deposition across northeastern Tibet. The extent of deformation, however, only expanded ~150 km outward to the north and east and ~150 km laterally to the west. A middle Miocene reorganization of deformation characterized by shortening at various orientations heralds the onset of the modern kinematic regime where shortening is coupled to strike slip. This regime is responsible for the majority of Cenozoic crustal shortening and thickening and the development of the northeastern Tibetan Plateau.

  18. The evolution of a Late Cretaceous-Cenozoic intraplate basin (Duaringa Basin), eastern Australia: evidence for the negative inversion of a pre-existing fold-thrust belt (United States)

    Babaahmadi, Abbas; Sliwa, Renate; Esterle, Joan; Rosenbaum, Gideon


    The Duaringa Basin in eastern Australia is a Late Cretaceous?-early Cenozoic sedimentary basin that developed simultaneously with the opening of the Tasman and Coral Seas. The basin occurs on the top of an earlier (Permian-Triassic) fold-thrust belt, but the negative inversion of this fold-thrust belt, and its contribution to the development of the Duaringa Basin, are not well understood. Here, we present geophysical datasets, including recently surveyed 2D seismic reflection lines, aeromagnetic and Bouguer gravity data. These data provide new insights into the structural style in the Duaringa Basin, showing that the NNW-striking, NE-dipping, deep-seated Duaringa Fault is the main boundary fault that controlled sedimentation in the Duaringa Basin. The major activity of the Duaringa Fault is observed in the southern part of the basin, where it has undergone the highest amount of displacement, resulting in the deepest and oldest depocentre. The results reveal that the Duaringa Basin developed in response to the partial negative inversion of the pre-existing Permian-Triassic fold-thrust belt, which has similar orientation to the extensional faults. The Duaringa Fault is the negative inverted part of a single Triassic thrust, known as the Banana Thrust. Furthermore, small syn-depositional normal faults at the base of the basin likely developed due to the reactivation of pre-existing foliations, accommodation faults, and joints associated with Permian-Triassic folds. In contrast to equivalent offshore basins, the Duaringa Basin lacks a complex structural style and thick syn-rift sediments, possibly because of the weakening of extensional stresses away from the developing Tasman Sea.

  19. Fossil Cenozoic crassatelline bivalves from Peru: New species and generic insights

    Directory of Open Access Journals (Sweden)

    Thomas J. DeVries


    Full Text Available Discoveries of new fossil Cenozoic crassatellines in Peru provide a new phylogenetic perspective on “large” Neogene genera, in which four lineages are considered to have arisen independently from different Paleogene Crassatella ancestors. Latest Oligocene and early Miocene species of the new genus Tilicrassatella gen. nov.―T. ponderosa, T. torrens sp. nov., and T. sanmartini sp. nov. from the East Pisco Basin―probably evolved from the late Eocene species, Crassatella rafaeli sp. nov., which itself differed in significant respects from slightly older species of the East Pisco Basin, C. neorhynchus and C. pedroi sp. nov. The paciphilic genus, Hybolophus, is raised to full generic status. Added to its ranks are the East Pisco Miocene species H. maleficae sp. nov., H. terrestris sp. nov., and the oldest species of the genus, the late Eocene or Oligocene H. disenum sp. nov. from the Talara Basin of northern Peru. Kalolophus gen. nov., encompassing circum-Caribbean fossil species, the extant species, K. speciosus, and the trans-isthmus species, K. antillarum, appears to have evolved from the early Oligocene Floridian species, Crassatella portelli sp. nov. The genus Marvacrassatella is a western Atlantic Miocene lineage most likely descended from Kalolophus. The genus Eucrassatella is restricted to Australian and New Zealand taxa. The Eocene New Zealand species, Spissatella media, is transferred to Eucrassatella and deemed a candidate for the most recent common ancestor of younger Eucrassatella and all Spissatella species. In the southern Pacific Ocean, the circum-Caribbean region, and tropical western America, crassatelline lineages developed one or more of the following characters: large resilifers, smooth ventral margins, and an extended left anterior cardinal tooth. Some of these late Paleogene convergent character changes might have countered increased shear forces exerted on the crassatelline valves while burrowing into finer-grained and

  20. Precise U-Pb dating of Cenozoic tropical reef carbonates: Linking the evolution of Cenozoic Caribbean reef carbonates to climatic and environmental changes. (United States)

    Silva-Tamayo, J. C.; Ducea, M.; Cardona, A.; Montes, C.; Rincon, D.; Machado, A.; Flores, A.; Sial, A.; Pardo, A.; Niño, H.; Ramirez, V.; Jaramillo, C.; Zapata, P.; Barrios, L.; Rosero, S.; Bayona, G.; Zapata, V.


    Coral reefs are very diverse and productive ecosystems; and have long been the base of the economic activity of several countries along the tropics. Because coral reefs are very sensitive to environmental changes and their adaptation to changing stressing conditions is very slow, the combination of current rapid environmental changes and the additional stresses created by growing human populations (i.e. rapid anthropogenic CO2 additions to the atmosphere),plus the economic and coastal development may become a lethal synergy. The ongoing acidification of modern oceans is a major issue of concern because it may have serious consequences for the survival of shelly marine invertebrates as the 21st century progresses. Ocean Acidification (OA) is now being driven by rapid CO2 release to the atmosphere. Although evidences of the devastating effects of oceanic acidification in the marine biota are provided by the decreased rate of coral skeleton production and the reduced ability of algae and free-swimming zooplankton to maintain protective shells, among others, predicting the effects of oceanic acidification on the future oceans (2050-2100) has remained rather difficult because the atmospheric CO2 sequestration by the global oceans occurs in geologic time scales. Important changes in the atmospheric pCO2 and major climatic/environmental events seem to have controlled the evolution of the Cenozoic equatorial-tropical carbonates r1-10. Rapid additions of green house gases to the atmosphere occurred during the Paleocene-Eocene transition and would have promoted several other events of global warming until the early Oligocene (i.e. the Eocene thermal maximum). These periods of high greenhouse gases concentrations would have also resulted on OA, affecting the reef carbonate ecology and tropical carbonate budgets. Relating temporal variations in the Cenozoic reef carbonate structure, ecology and factory is vital to help understanding and predicting the future effects of the

  1. Late Cenozoic structure and stratigraphy of south-central Washington

    International Nuclear Information System (INIS)

    Reidel, S.P.; Fecht, K.R.; Lindsey, K.A.


    The structural framework of the Columbia Basin began developing before Columbia River Basalt Group (CRBG) volcanism. Prior to 17.5 Ma, the eastern part of the basin was a relatively stable area, with a basement of Paleozoic and older crystalline rock. The western part was an area of subsidence in which large volumes of sediment and volcanic rocks accumulated. Concurrent with eruption of the CRBG, anticlinal ridges of the Yakima Fold Belt (YFB) were growing under north-south compression. Topographic expression of these features was later masked by the large volume of CRBG basalt flowing west from fissures in the eastern Columbia Basin. The folds continued to develop after cessation of volcanism, leading to as much as 1,000 m of structural relief in the past 10 million years. Post-CRBG evolution of the Columbia Basin is recorded principally in folding and faulting in the YFB and sediments deposited in the basins. The accompanying tectonism resulted in lateral migration of major depositional systems into subsiding structural lows. Although known late Cenozoic faults are on anticlinal ridges, earthquake focal mechanisms and contemporary strain measurements indicate most stress release is occurring in the synclinal areas under north-south compression. There is no obvious correlation between focal mechanisms for earthquakes whose foci are in the CRBG and the location of known faults. High in situ stress values help to explain the occurrence of microseismicity in the Columbia Basin but not the pattern. Microseismicity appears to occur in unaltered fresh basalt. Faulted basalt associated with the YFB is highly brecciated and commonly altered to clay. The high stress, abundance of ground water in confined aquifers of the CRBG, and altered basalt in fault zones suggest that the frontal faults on the anticlinal ridges probably have some aseismic deformation. 85 refs

  2. Evolution of Meso-Cenozoic lithospheric thermal-rheological structure in the Jiyang sub-basin, Bohai Bay Basin, eastern North China Craton (United States)

    Xu, Wei; Qiu, Nansheng; Wang, Ye; Chang, Jian


    The Meso-Cenozoic lithospheric thermal-rheological structure and lithospheric strength evolution of the Jiyang sub-basin were modeled using thermal history, crustal structure, and rheological parameter data. Results indicate that the thermal-rheological structure of the Jiyang sub-basin has exhibited obvious rheological stratification and changes over time. During the Early Mesozoic, the uppermost portion of the upper crust, middle crust, and the top part of the upper mantle had a thick brittle layer. During the early Early Cretaceous, the top of the middle crust's brittle layer thinned because of lithosphere thinning and temperature increase, and the uppermost portion of the upper mantle was almost occupied by a ductile layer. During the late Early Cretaceous, the brittle layer of the middle crust and the upper mantle changed to a ductile one. Then, the uppermost portion of the middle crust changed to a thin brittle layer in the late Cretaceous. During the early Paleogene, the thin brittle layer of the middle crust became even thinner and shallower under the condition of crustal extension. Currently, with the decrease in lithospheric temperature, the top of the upper crust, middle crust, and the uppermost portion of the upper mantle are of a brittle layer. The total lithospheric strength and the effective elastic thickness ( T e) in Meso-Cenozoic indicate that the Jiyang sub-basin experienced two weakened stages: during the late Early Cretaceous and the early Paleogene. The total lithospheric strength (approximately 4-5 × 1013 N m-1) and T e (approximately 50-60 km) during the Early Mesozoic was larger than that after the Late Jurassic (2-7 × 1012 N m-1 and 19-39 km, respectively). The results also reflect the subduction, and rollback of Pacific plate is the geodynamic mechanism of the destruction of the eastern North China Craton.

  3. Proteomic responses reveal the differential effects induced by cadmium in mussels Mytilus galloprovincialis at early life stages. (United States)

    Xu, Lanlan; Peng, Xiao; Yu, Deliang; Ji, Chenglong; Zhao, Jianmin; Wu, Huifeng


    Cadmium (Cd) has become an important metal contaminant and posed severe risk on the organisms in the coastal environments of the Bohai Sea. Marine mussel Mytilus galloprovincialis is widely distributed along the Bohai coast and consumed as seafood by local residents. Evidences indicate that the early stages of marine organisms are more sensitive to metal contaminants. In this study, we applied two-dimensional electrophoresis-based proteomics to characterize the biological effects of Cd (50 μg L(-1)) in the early life stages (D-shape larval and juvenile) of mussels. The different proteomic responses demonstrated the differential responsive mechanisms to Cd exposure in these two early life stages of mussels. In details, results indicated that Cd mainly induced immune and oxidative stresses in both D-shape larval and juvenile mussels via different pathways. In addition, the significant up-regulation of triosephosphate isomerase and metallothionein confirmed the enhanced energy demand and mobilized detoxification mechanism in D-shape larval mussels exposed to Cd. In juvenile mussels, Cd exposure also induced clear apoptosis. Overall, this work suggests that Cd is a potential immune toxicant to mussel M. galloprovincialis at early life stages. Copyright © 2016 Elsevier Ltd. All rights reserved.

  4. Molecular imaging reveals elevated VEGFR-2 expression in retinal capillaries in diabetes: a novel biomarker for early diagnosis


    Sun, Dawei; Nakao, Shintaro; Xie, Fang; Zandi, Souska; Bagheri, Abouzar; Kanavi, Mozhgan Rezaei; Samiei, Shahram; Soheili, Zahra-Soheila; Frimmel, Sonja; Zhang, Zhongyu; Ablonczy, Zsolt; Ahmadieh, Hamid; Hafezi-Moghadam, Ali


    Diabetic retinopathy (DR) is a microvascular complication of diabetes and a leading cause of vision loss. Biomarkers and methods for early diagnosis of DR are urgently needed. Using a new molecular imaging approach, we show up to 94% higher accumulation of custom designed imaging probes against vascular endothelial growth factor receptor 2 (VEGFR-2) in retinal and choroidal vessels of diabetic animals (P

  5. 7T T-2*-weighted magnetic resonance imaging reveals cortical phase differences between early- and late-onset Alzheimer's disease

    NARCIS (Netherlands)

    van Rooden, S.; Doan, N.T.; Versluis, M.J.; Goos, J.D.C.; Webb, A.G.; Oleksik, A.M.; van der Flier, W.M.; Scheltens, P.; Barkhof, F.; Weverlinge-Rynsburger, A.W.E.; Blauw, G. J.; Reiber, J.H.C.; van Buchem, M.A.; Milles, J.; van der Grond, J.


    The aim of this study is to explore regional iron-related differences in the cerebral cortex, indicative of Alzheimer's disease pathology, between early- and late-onset Alzheimer's disease (EOAD, LOAD, respectively) patients using 7T magnetic resonance phase images. High-resolution T

  6. Comparative Analysis of WUSCHEL-Related Homeobox Genes Revealed Their Parent-of-Origin and Cell Type-Specific Expression Pattern During Early Embryogenesis in Tobacco

    Directory of Open Access Journals (Sweden)

    Xuemei Zhou


    Full Text Available WUSCHEL-related homeobox (WOX gene is a plant-specific clade of homeobox transcription factors. Increasing evidences reveal that WOXs play critical roles in early embryogenesis, which involves zygote development, initiation of zygote division, and apical or basal cell lineage establishment. However, how WOXs regulate these developmental events remains largely unknown, and even detailed expression pattern in gametes and early proembryos is not yet available. Here, 13 WOX family genes were identified in Nicotiana tabacum genome. Comparative analysis of 13 WOX family genes with their homologs in Arabidopsis thaliana reveals relatively conserved expression pattern of WUS and WOX5 in shoot/root apical meristem. Whereas variations were also found, e.g., lacking homolog of WOX8 (a marker for suspensor cell in tobacco genome and the expression of WOX2/WOX9 in both apical cell and basal cell. Transient transcriptional activity analysis revealed that WOXs in WUS clade have repressive activities for their target's transcription, whereas WOXs in ancient and intermediate clade have activation activities, giving a molecular basis for the phylogenetic classification of tobacco WOXs into three major clades. Expression pattern analysis revealed that some WOXs (e.g., WOX 13a expressed in both male and female gametes and some WOXs (e.g., WOX 11 and WOX 13b displayed the characteristics of parent-of-origin genes. Interestingly, some WOXs (e.g., WOX2 and WOX9, which are essential for early embryo patterning, were de novo transcribed in zygote, indicating relevant mechanism for embryo pattern formation is only established in zygote right after fertilization and not carried in by gametes. We also found that most WOXs displayed a stage-specific and cell type-specific expression pattern. Taken together, this work provides a detailed landscape of WOXs in tobacco during fertilization and early embryogenesis, which will facilitate the understanding of their specific roles

  7. Cenozoic Uplift and Climate Change of the Northeast Tibetan Plateau: Evidence from Leaf Wax Stable Isotopic Records (United States)

    Hou, M.; Zhuang, G.; Wu, M.


    Topics about the deformation history and uplift mechanism of Tibetan Plateau have been largely debated in the past few decades. Different geodynamic models present different predictions on the mountain building processes and hence the surface uplift history. For example, one tectonic model suggests a rapid uplift (>1.0 to 2.0 km) of the Tibetan Plateau in the period of ca. 10 to 8 Ma as result of isostatic rebound due to the removal of over-thickened mental lithosphere beneath. Whilst the stepwise uplift model infers that the high topography was growing progressively from south to north with the Northeast Tibetan Plateau being built in the Pliocene to present. In this case, the timing of Cenozoic uplift of Northeast Tibetan Plateau would provide information for distinguishing competing geodynamic processes. The stable isotope based paleoaltimetry holds the key to answering when the high topography was built. Additionally, the evolution of Cenozoic Asian climate was argued to be closely related to the high topography built up on the Tibetan Plateau since the India-Asian collision and/or impacted by the global change. To understand when the high topography was built and how the growth of Tibetan Plateau impacted the climate, we reconstructed the long-term histories of paleohydrology from hinterland and foreland basins in the Northeast Tibetan Plateau. We applied the compound-specific isotope hydrogen analysis to leaf wax n-alkanes (δ2Hn-alk) that are preserved in well-dated stratigraphic series (ca. 24 Ma to the present) in the Northeast Tibetan Plateau. The newly reconstructed δ2Hn-alk supports the inference of high topography on the Northeast Tibetan Plateau was built during the middle to late Miocene. Our inference is consistent with sedimentary and basement rock studies that show fundamental changes in facies and provenance and exhumation history. The new δ2Hn-alk record also reveals that the regional climate became drier since the middle Miocene following the

  8. Extensional vs contractional Cenozoic deformation in Ibiza (Balearic Promontory, Spain): Integration in the West Mediterranean back-arc setting (United States)

    Etheve, Nathalie; Frizon de Lamotte, Dominique; Mohn, Geoffroy; Martos, Raquel; Roca, Eduard; Blanpied, Christian


    Based on field work and seismic reflection data, we investigate the Cenozoic tectono-sedimentary evolution offshore and onshore Ibiza allowing the proposal of a new tectonic agenda for the region and its integration in the geodynamic history of the West Mediterranean. The late Oligocene-early Miocene rifting event, which characterizes the Valencia Trough and the Algerian Basin, located north and south of the study area respectively, is also present in Ibiza and particularly well-expressed in the northern part of the island. Among these two rifted basins initiated in the frame of the European Cenozoic Rift System, the Valencia Trough failed rapidly while the Algerian Basin evolved after as a back-arc basin related to the subduction of the Alpine-Maghrebian Tethys. The subsequent middle Miocene compressional deformation was localized by the previous extensional faults, which were either inverted or passively translated depending on their initial orientation. Despite the lateral continuity between the External Betics and the Balearic Promontory, it appears from restored maps that this tectonic event cannot be directly related to the Betic orogen, but results from compressive stresses transmitted through the Algerian Basin. A still active back-arc asthenospheric rise likely explains the stiff behavior of this basin, which has remained poorly deformed up to recent time. During the late Miocene a new extensional episode reworked the southern part of the Balearic Promontory. It is suggested that this extensional deformation developed in a trans-tensional context related to the westward translation of the Alboran Domain and the coeval right-lateral strike-slip movement along the Emile Baudot Escarpment bounding the Algerian Basin to the north.

  9. Late Cenozoic Samtskhe-Javakheti Volcanic Highland, Georgia:The Result of Mantle Plumes Activity (United States)

    Okrostsvaridze, Avtandil


    Late Cenozoic Samtskhe-Javakheti continental volcanic highland (1500-2500 m a.s.l) is located in the SW part of the Lesser Caucasus. In Georgia the highland occupies more than 4500 km2, however its large part spreads towards the South over the territories of Turkey and Armenia. One can point out three stages of magmatic activity in this volcanic highland: 1. Early Pliocene activity (5.2-2.8 Ma; zircons U-Pb age) - when a large part of the highland was built up. It is formed from volcanic lava-breccias of andesite-dacitic composition, pyroclastic rocks and andesite-basalt lava flow. The evidences of this structure are: a large volume of volcanic material (>1500 km3); big thickness (700-1100 m in average), large-scale of lava flows (length 35 km, width 2.5-3.5 km, thickness 30-80 m), big thickness of volcanic ash horizons (300 cm at some places) and big size of volcanic breccias (diameter >1 m). Based on this data we assume that a source of this structure was a supervolcano (Okrostsvaridze et al., 2016); 2. Early Pleistocene activity (2.4 -1.6 Ma; zircons U-Pb age) - when continental flood basalts of 100-300 m thickness were formed. The flow is fully crystalline, coarse-grained, which mainly consist of olivine and basic labradorite. There 143Nd/144Nd parameter varies in the range of +0.41703 - +0.52304, and 87Sr/88Sr - from 0.7034 to 0.7039; 3. Late Pleistocene activity (0.35-0.021 Ma; zircons U-Pb age) - when intraplate Abul-Samsari linear volcanic ridge of andesite composition was formed stretching to the S-N direction for 40 km with the 8-12 km width and contains more than 20 volcanic edifices. To the South of the Abul-Samsari ridge the oldest (0.35-0.30 Ma; zircons U-Pb age) volcano Didi Abuli (3305 m a.s.l.) is located. To the North ages of volcano edifices gradually increase. Farther North the youngest volcano Tavkvetili (0.021-0. 030 Ma) is located (2583 m a.s.l.). One can see from this description that the Abul-Samsari ridge has all signs characterizing

  10. Gene expression profiling reveals underlying molecular mechanisms of the early stages of tamoxifen-induced rat hepatocarcinogenesis

    International Nuclear Information System (INIS)

    Pogribny, Igor P.; Bagnyukova, Tetyana V.; Tryndyak, Volodymyr P.; Muskhelishvili, Levan; Rodriguez-Juarez, Rocio; Kovalchuk, Olga; Han Tao; Fuscoe, James C.; Ross, Sharon A.; Beland, Frederick A.


    Tamoxifen is a widely used anti-estrogenic drug for chemotherapy and, more recently, for the chemoprevention of breast cancer. Despite the indisputable benefits of tamoxifen in preventing the occurrence and re-occurrence of breast cancer, the use of tamoxifen has been shown to induce non-alcoholic steatohepatitis, which is a life-threatening fatty liver disease with a risk of progression to cirrhosis and hepatocellular carcinoma. In recent years, the high-throughput microarray technology for large-scale analysis of gene expression has become a powerful tool for increasing the understanding of the molecular mechanisms of carcinogenesis and for identifying new biomarkers with diagnostic and predictive values. In the present study, we used the high-throughput microarray technology to determine the gene expression profiles in the liver during early stages of tamoxifen-induced rat hepatocarcinogenesis. Female Fisher 344 rats were fed a 420 ppm tamoxifen containing diet for 12 or 24 weeks, and gene expression profiles were determined in liver of control and tamoxifen-exposed rats. The results indicate that early stages of tamoxifen-induced liver carcinogenesis are characterized by alterations in several major cellular pathways, specifically those involved in the tamoxifen metabolism, lipid metabolism, cell cycle signaling, and apoptosis/cell proliferation control. One of the most prominent changes during early stages of tamoxifen-induced hepatocarcinogenesis is dysregulation of signaling pathways in cell cycle progression from the G 1 to S phase, evidenced by the progressive and sustained increase in expression of the Pdgfc, Calb3, Ets1, and Ccnd1 genes accompanied by the elevated level of the PI3K, p-PI3K, Akt1/2, Akt3, and cyclin B, D1, and D3 proteins. The early appearance of these alterations suggests their importance in the mechanism of neoplastic cell transformation induced by tamoxifen

  11. Metabolomics and transcriptomics reveal the toxicity of difenoconazole to the early life stages of zebrafish (Danio rerio). (United States)

    Teng, Miaomiao; Zhu, Wentao; Wang, Dezhen; Qi, Suzhen; Wang, Yao; Yan, Jin; Dong, Kai; Zheng, Mingqi; Wang, Chengju


    Difenoconazole is widely used to inhibit the growth of fungi, but its residue in the water environment may threaten ecosystem and human health. Here, 1 H nuclear magnetic resonance (NMR) and LC-MS/MS based metabolomics and transcriptomics approaches were used to assess the response of zebrafish to difenoconazole exposure. Early life stages of zebrafish were exposed to difenoconazole at environmentally relevant concentrations for 168h. Their comparison with the control group suggested an adverse development and disturbance of steroid hormones and VTG. KEGG pathway analysis identified five biological processes on the basis of differentially expressed genes (DEGs), as well as altered metabolites and amino acids in zebrafish following difenoconazole exposure. These affected processes included energy metabolism, amino acids metabolism, lipid metabolism, nucleotide metabolism, and an immune-related pathway. Collectively, these results bring us closer to an incremental understanding of the toxic effects of difenoconazole on zebrafish in its early development, and lend support to the continued use of the early life stages of zebrafish as a classical model to evaluate underlying environmental risks of xenobiotics in aquatic organisms. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Tikal, Guatemala, and Emergent Maya Civilization: Excavations reveal evidence of early complex-living at a prime Maya Indian site. (United States)

    Coe, W R


    It would be extravagant to claim that these pages have outlined meaningfully the early evolution of Tikal. Data have been provided largely for one excavation locus at a site which, for all its importance, merely has symptomatic value. We cannot claim to have, at present, sufficient material to document satisfyingly the conditions and products of community-wide living at any point in these early times. Present knowledge of Eb and Tzec ceramics and of all the usual archeological correlates (architecture and so on) is disturbingly incomplete. While we do have a good many data on residence throughout much of Preclassic time, considerably more information is needed before a solid evaluation of Preclassic Tikal society can be achieved. One can only hope that pending excavation programs will provide it. Yet, experience shows that probably only a tiny percentage of early cultural remains, regardless of their grandeur and importance at the time, would have survived the constant quest for construction fills to satisfy a seemingly interminable need to build and revamp.

  13. A mouse model for creatine transporter deficiency reveals early onset cognitive impairment and neuropathology associated with brain aging. (United States)

    Baroncelli, Laura; Molinaro, Angelo; Cacciante, Francesco; Alessandrì, Maria Grazia; Napoli, Debora; Putignano, Elena; Tola, Jonida; Leuzzi, Vincenzo; Cioni, Giovanni; Pizzorusso, Tommaso


    Mutations in the creatine (Cr) transporter (CrT) gene lead to cerebral creatine deficiency syndrome-1 (CCDS1), an X-linked metabolic disorder characterized by cerebral Cr deficiency causing intellectual disability, seizures, movement and autistic-like behavioural disturbances, language and speech impairment. Since no data are available about the neural and molecular underpinnings of this disease, we performed a longitudinal analysis of behavioural and pathological alterations associated with CrT deficiency in a CCDS1 mouse model. We found precocious cognitive and autistic-like defects, mimicking the early key features of human CCDS1. Moreover, mutant mice displayed a progressive impairment of short and long-term declarative memory denoting an early brain aging. Pathological examination showed a prominent loss of GABAergic synapses, marked activation of microglia, reduction of hippocampal neurogenesis and the accumulation of autofluorescent lipofuscin. Our data suggest that brain Cr depletion causes both early intellectual disability and late progressive cognitive decline, and identify novel targets to design intervention strategies aimed at overcoming brain CCDS1 alterations. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email:

  14. Cenozoic intraplate tectonics in Central Patagonia: Record of main Andean phases in a weak upper plate (United States)

    Gianni, G. M.; Echaurren, A.; Folguera, A.; Likerman, J.; Encinas, A.; García, H. P. A.; Dal Molin, C.; Valencia, V. A.


    Contraction in intraplate areas is still poorly understood relative to similar deformation at plate margins. In order to contribute to its comprehension, we study the Patagonian broken foreland (PBF) in South America whose evolution remains controversial. Time constraints of tectonic events and structural characterization of this belt are limited. Also, major causes of strain location in this orogen far from the plate margin are enigmatic. To unravel tectonic events, we studied the Cenozoic sedimentary record of the central sector of the Patagonian broken foreland (San Bernardo fold and thrust belt, 44°30‧S-46°S) and the Andes (Meseta de Chalia, 46°S) following an approach involving growth-strata detection, U-Pb geochronology and structural modeling. Additionally, we elaborate a high resolution analysis of the effective elastic thickness (Te) to examine the relation between intraplate contraction location and variations in lithospheric strength. The occurrence of Eocene growth-strata ( 44-40 Ma) suggests that contraction in the Andes and the Patagonian broken foreland was linked to the Incaic phase. Detection of synextensional deposits suggests that the broken foreland collapsed partially during Oligocene to early Miocene. During middle Miocene times, the Quechua contractional phase produced folding of Neogene volcanic rocks and olistostrome deposition at 17 Ma. Finally, the presented Te map shows that intraplate contraction related to Andean phases localized preferentially along weak lithospheric zones (Te < 15 km). Hence, the observed strain distribution in the PBF appears to be controlled by lateral variations in the lithospheric strength. Variations in this parameter could be related to thermo-mechanical weakening produced by intraplate rifting in Paleozoic-Mesozoic times.

  15. Cenozoic to Cretaceous paleomagnetic dataset from Egypt: New data, review and global analysis (United States)

    Perrin, Mireille; Saleh, Ahmed


    Different phases of igneous activity took place in Egypt during the Mesozoic and the Cenozoic and oriented samples were collected from three Cenozoic localities (Baharya oasis in the Western Desert, Abu Had in the Eastern Desert and Quseir along the Red Sea coast), and four Cretaceous localities (Toshki & Abu Simbel south of Aswan, and Shalaten & Abu Shihat along the Red Sea coast). Rock magnetic properties of the samples indicate magnetite and titanomagnetite as the main carrier of the remanent magnetization. Following stepwise demagnetization, characteristic remanent directions were identified only for 62% of the samples, a fairly low rate for that type of samples, and 8 new paleomagnetic poles were calculated. All our Cenozoic poles fall clearly off Master Polar Wander Paths proposed for South Africa. Therefore, all paleomagnetic results, previously published for Egypt, were compiled from Cretaceous to Quaternary. The published poles largely overlap, blurring the Egyptian Apparent Polar Wander Path. A new analysis at the site level was then carried out. Only poles having a kappa larger than 50 were selected, and new pole positions were calculated by area and by epoch, when at least 3 sites were available. Even though the selection drastically reduced the number of considered poles, it allows definition of a reliable Cenozoic apparent polar wander trend for Egypt that differs from the South African Master Polar Wander Path by about 10-15 °. If the Cretaceous igneous poles are in good agreement with the rest of the African data, the sedimentary poles plot close to the Cenozoic portion of the South African Master Polar Wander Path, a discrepancy that could be related either to inclination flattening and/or error on age and/or remagnetization in the Cenozoic.

  16. Shallow gas in Cenozoic sediments of the Southern North Sea (United States)

    Trampe, Anna F.; Lutz, Rüdiger; Franke, Dieter; Thöle, Hauke; Arfai, Jashar


    Shallow petroleum systems in the southern North Sea are known for several decades but they were not actively explored for a long time. In recent years these unconventional shallow petroleum systems are studied in greater detail and one shallow gas field (A-12) is in production in the Netherlands. Additionally, oil was encountered in Miocene sandstones in the southern Danish North Sea (Lille John well) just north of the Danish-German border. Seismic amplitude anomalies are an indication for hydrocarbons in sediments. Therefore we have mapped the occurrence of seismic amplitude anomalies in the German North Sea based on more than 25.000 km of 2D seismic data and around 4.000 km2 of 3D seismic data. Amplitude anomalies are ubiquitous phenomena in the study area. These anomalies are not only caused by hydrocarbons but also by changing lithologies e.g. peat or fluid migration. Therefore several classes of seismic anomalies, e.g. bright spots, chimneys, blanking areas and velocity pull-down were mapped. Examples for these classes were studied with AVO (amplitude variation with offset) analyses to verify the existence or non-existence of gas in the sediments. Shallow gas can be produced and transported through the dense pipeline grid of the southern and central North Sea or it could be burned offshore close to wind parks in small power plants and the electric energy then transported through the existing power connections of the wind parks. Thus enabling a continuous energy supply during calm wind periods. This study is carried out within the framework of the project "Geoscientific Potential of the German North Sea (GPDN)" in which the Cenozoic sedimentary system was mapped in great detail. A detailed model of delta evolution (Baltic river system) was developed which serves as a structural framework. The studied interval is time equivalent to the Utsira formation which is used offshore Norway for sequestration of CO2. These different possibilities of using or exploiting

  17. The Cenozoic geological evolution of the Central and Northern North Sea based on seismic sequence stratigraphy

    Energy Technology Data Exchange (ETDEWEB)

    Jordt, Henrik


    This thesis represents scientific results from seismic sequence stratigraphic investigations. These investigations and results are integrated into an ongoing mineralogical study of the Cenozoic deposits. the main results from this mineralogical study are presented and discussed. The seismic investigations have provided boundary conditions for a forward modelling study of the Cenozoic depositional history. Results from the forward modelling are presented as they emphasise the influence of tectonics on sequence development. The tectonic motions described were important for the formation of the large oil and gas fields in the North Sea.

  18. Small RNA Sequencing Reveals Differential miRNA Expression in the Early Development of Broccoli (Brassica oleracea var. italica) Pollen. (United States)

    Li, Hui; Wang, Yu; Wu, Mei; Li, Lihong; Jin, Chuan; Zhang, Qingli; Chen, Chengbin; Song, Wenqin; Wang, Chunguo


    Pollen development is an important and complex biological process in the sexual reproduction of flowering plants. Although the cytological characteristics of pollen development are well defined, the regulation of its early stages remains largely unknown. In the present study, miRNAs were explored in the early development of broccoli ( Brassica oleracea var. italica ) pollen. A total of 333 known miRNAs that originated from 235 miRNA families were detected. Fifty-five novel miRNA candidates were identified. Sixty of the 333 known miRNAs and 49 of the 55 predicted novel miRNAs exhibited significantly differential expression profiling in the three distinct developmental stages of broccoli pollen. Among these differentially expressed miRNAs, miRNAs that would be involved in the developmental phase transition from uninucleate microspores to binucleate pollen grains or from binucleate to trinucleate pollen grains were identified. miRNAs that showed significantly enriched expression in a specific early stage of broccoli pollen development were also observed. In addition, 552 targets for 127 known miRNAs and 69 targets for 40 predicted novel miRNAs were bioinformatically identified. Functional annotation and GO (Gene Ontology) analysis indicated that the putative miRNA targets showed significant enrichment in GO terms that were related to plant organ formation and morphogenesis. Some of enriched GO terms were detected for the targets directly involved in plant male reproduction development. These findings provided new insights into the functions of miRNA-mediated regulatory networks in broccoli pollen development.

  19. New early Eocene vertebrate assemblage from western India reveals a mixed fauna of European and Gondwana affinities

    Directory of Open Access Journals (Sweden)

    Thierry Smith


    Full Text Available The Ypresian Cambay Shale Formation at Vastan and Mangrol lignite mines in Gujarat, western India, has yielded a rich vertebrate fauna with numerous taxa of European affinities. Here we report a new, approximately contemporary vertebrate assemblage from two fossiliferous layers in the nearby mine of Tadkeshwar. These layers have yielded a similar mammal fauna with the co-occurrence of the perissodactyl-like cambaytheriid Cambaytherium thewissi, the adapoid primates Marcgodinotius indicus and cf. Asiadapis cambayensis, and the hyaenodontid Indohyaenodon raoi. The presence of these species in both Vastan and Tadkeshwar mines and at different levels suggests that the deposits between the two major lignite seams represent a single land mammal age. Apart from the aforementioned species there is a new, smaller species of Cambaytherium, and a new genus and species of esthonychid tillodont. This fauna also contains the first large early Eocene vertebrates from India, including an unidentified Coryphodon-like pantodont, a dyrosaurid crocodyliform and a new giant madtsoiid snake. Among the Tadkeshwar vertebrates several taxa are of Gondwana affinities, such as Pelomedusoides turtles, dyrosaurids, and large madtsoiids, attesting that the early Eocene was a crucial period in India during which Laurasian taxa of European affinities co-existed with relict taxa from Gondwana before the India-Asia collision. Our results suggest that terrestrial faunas could have dispersed to or from Europe during episodes of contact between the Indian subcontinent and different island blocks along the northern margin of the Neotethys, such as the Kohistan–Ladakh island-arc system. Gondwana taxa might represent remnants of ghost lineages shared with Madagascar, which reached the Indian subcontinent during the late Cretaceous; alternatively they might have come from North Africa and passed along the southern margin of the Neotethys to reach the Indian subcontinent. These

  20. Serum Metabolomics Reveals Serotonin as a Predictor of Severe Dengue in the Early Phase of Dengue Fever (United States)

    Thein, Tun Linn; Fang, Jinling; Pang, Junxiong; Ooi, Eng Eong; Leo, Yee Sin; Ong, Choon Nam; Tannenbaum, Steven R.


    Effective triage of dengue patients early in the disease course for in- or out-patient management would be useful for optimal healthcare resource utilization while minimizing poor clinical outcome due to delayed intervention. Yet, early prognosis of severe dengue is hampered by the heterogeneity in clinical presentation and routine hematological and biochemical measurements in dengue patients that collectively correlates poorly with eventual clinical outcome. Herein, untargeted liquid-chromatography mass spectrometry metabolomics of serum from patients with dengue fever (DF) and dengue hemorrhagic fever (DHF) in the febrile phase (1.5) in the serum, among which are two products of tryptophan metabolism–serotonin and kynurenine. Serotonin, involved in platelet aggregation and activation decreased significantly, whereas kynurenine, an immunomodulator, increased significantly in patients with DHF, consistent with thrombocytopenia and immunopathology in severe dengue. To sensitively and accurately evaluate serotonin levels as prognostic biomarkers, we implemented stable-isotope dilution mass spectrometry and used convalescence samples as their own controls. DHF serotonin was significantly 1.98 fold lower in febrile compared to convalescence phase, and significantly 1.76 fold lower compared to DF in the febrile phase of illness. Thus, serotonin alone provided good prognostic utility (Area Under Curve, AUC of serotonin = 0.8). Additionally, immune mediators associated with DHF may further increase the predictive ability than just serotonin alone. Nine cytokines, including IFN-γ, IL-1β, IL-4, IL-8, G-CSF, MIP-1β, FGF basic, TNFα and RANTES were significantly different between DF and DHF, among which IFN-γ ranked top by multivariate statistics. Combining serotonin and IFN-γ improved the prognosis performance (AUC = 0.92, sensitivity = 77.8%, specificity = 95.8%), suggesting this duplex panel as accurate metrics for the early prognosis of DHF. PMID:27055163

  1. Ancient DNA from South-East Europe Reveals Different Events during Early and Middle Neolithic Influencing the European Genetic Heritage. (United States)

    Hervella, Montserrat; Rotea, Mihai; Izagirre, Neskuts; Constantinescu, Mihai; Alonso, Santos; Ioana, Mihai; Lazăr, Cătălin; Ridiche, Florin; Soficaru, Andrei Dorian; Netea, Mihai G; de-la-Rua, Concepcion


    The importance of the process of Neolithization for the genetic make-up of European populations has been hotly debated, with shifting hypotheses from a demic diffusion (DD) to a cultural diffusion (CD) model. In this regard, ancient DNA data from the Balkan Peninsula, which is an important source of information to assess the process of Neolithization in Europe, is however missing. In the present study we show genetic information on ancient populations of the South-East of Europe. We assessed mtDNA from ten sites from the current territory of Romania, spanning a time-period from the Early Neolithic to the Late Bronze Age. mtDNA data from Early Neolithic farmers of the Starčevo Criş culture in Romania (Cârcea, Gura Baciului and Negrileşti sites), confirm their genetic relationship with those of the LBK culture (Linienbandkeramik Kultur) in Central Europe, and they show little genetic continuity with modern European populations. On the other hand, populations of the Middle-Late Neolithic (Boian, Zau and Gumelniţa cultures), supposedly a second wave of Neolithic migration from Anatolia, had a much stronger effect on the genetic heritage of the European populations. In contrast, we find a smaller contribution of Late Bronze Age migrations to the genetic composition of Europeans. Based on these findings, we propose that permeation of mtDNA lineages from a second wave of Middle-Late Neolithic migration from North-West Anatolia into the Balkan Peninsula and Central Europe represent an important contribution to the genetic shift between Early and Late Neolithic populations in Europe, and consequently to the genetic make-up of modern European populations.

  2. Historical DNA reveals the demographic history of Atlantic cod (Gadus morhua) in medieval and early modern Iceland. (United States)

    Ólafsdóttir, Guðbjörg Ásta; Westfall, Kristen M; Edvardsson, Ragnar; Pálsson, Snæbjörn


    Atlantic cod (Gadus morhua) vertebrae from archaeological sites were used to study the history of the Icelandic Atlantic cod population in the time period of 1500-1990. Specifically, we used coalescence modelling to estimate population size and fluctuations from the sequence diversity at the cytochrome b (cytb) and Pantophysin I (PanI) loci. The models are consistent with an expanding population during the warm medieval period, large historical effective population size (NE), a marked bottleneck event at 1400-1500 and a decrease in NE in early modern times. The model results are corroborated by the reduction of haplotype and nucleotide variation over time and pairwise population distance as a significant portion of nucleotide variation partitioned across the 1550 time mark. The mean age of the historical fished stock is high in medieval times with a truncation in age in early modern times. The population size crash coincides with a period of known cooling in the North Atlantic, and we conclude that the collapse may be related to climate or climate-induced ecosystem change.

  3. Effects of Repeated Concussions and Sex on Early Processing of Emotional Facial Expressions as Revealed by Electrophysiology. (United States)

    Carrier-Toutant, Frédérike; Guay, Samuel; Beaulieu, Christelle; Léveillé, Édith; Turcotte-Giroux, Alexandre; Papineau, Samaël D; Brisson, Benoit; D'Hondt, Fabien; De Beaumont, Louis


    Concussions affect the processing of emotional stimuli. This study aimed to investigate how sex interacts with concussion effects on early event-related brain potentials (ERP) measures (P1, N1) of emotional facial expressions (EFE) processing in asymptomatic, multi-concussion athletes during an EFE identification task. Forty control athletes (20 females and 20 males) and 43 multi-concussed athletes (22 females and 21 males), recruited more than 3 months after their last concussion, were tested. Participants completed the Beck Depression Inventory II, the Beck Anxiety Inventory, the Post-Concussion Symptom Scale, and an Emotional Facial Expression Identification Task. Pictures of male and female faces expressing neutral, angry, and happy emotions were randomly presented and the emotion depicted had to be identified as fast as possible during EEG acquisition. Relative to controls, concussed athletes of both sex exhibited a significant suppression of P1 amplitude recorded from the dominant right hemisphere while performing the emotional face expression identification task. The present study also highlighted a sex-specific suppression of the N1 component amplitude after concussion which affected male athletes. These findings suggest that repeated concussions alter the typical pattern of right-hemisphere response dominance to EFE in early stages of EFE processing and that the neurophysiological mechanisms underlying the processing of emotional stimuli are distinctively affected across sex. (JINS, 2018, 24, 1-11).

  4. New Genetic Insights into Pearl Millet Diversity As Revealed by Characterization of Early- and Late-Flowering Landraces from Senegal

    Directory of Open Access Journals (Sweden)

    Oumar Diack


    Full Text Available Pearl millet (Pennisetum glaucum (L. R. Br. is a staple food and a drought-tolerant cereal well adapted to Sub-Saharan Africa agro-ecosystems. An important diversity of pearl millet landraces has been widely conserved by farmers and therefore could help copping with climate changes and contribute to future food security. Hence, characterizing its genetic diversity and population structure can contribute to better assist breeding programs for a sustainable agricultural productivity enhancement. Toward this goal, a comprehensive panel of 404 accessions were used that correspond to 12 improved varieties, 306 early flowering and 86 late-flowering cultivated landraces from Senegal. Twelve highly polymorphic SSR markers were used to study diversity and population structure. Two genes, PgMADS11 and PgPHYC, were genotyped to assess their association to flowering phenotypic difference in landraces. Results indicate a large diversity and untapped potential of Senegalese pearl millet germplasm as well as a genetic differentiation between early- and late-flowering landraces. Further, a fine-scale genetic difference of PgPHYC and PgMADS11 (SNP and indel, respectively and co-variation of their alleles with flowering time were found among landraces. These findings highlight new genetic insights of pearl millet useful to define heterotic populations for breeding, genomic association panel, or crosses for trait-specific mapping.

  5. The cenozoic strike-slip faults and TTHE regional crust stability of Beishan area

    International Nuclear Information System (INIS)

    Guo Zhaojie; Zhang Zhicheng; Zhang Chen; Liu Chang; Zhang Yu; Wang Ju; Chen Weiming


    The remote sensing images and geological features of Beishan area indicate that the Altyn Tagh fault, Sanweishan-Shuangta fault, Daquan fault and Hongliuhe fault are distributed in Beishan area from south to north. The faults are all left-lateral strike-slip faults with trending of NE40-50°, displaying similar distribution pattern. The secondary branch faults are developed at the end of each main strike-slip fault with nearly east to west trending form dendritic oblique crossings at the angle of 30-50°. Because of the left-lateral slip of the branch faults, the granites or the blocks exposed within the branch faults rotate clockwisely, forming 'Domino' structures. So the structural style of Beishan area consists of the Altyn Tagh fault, Sanweishan-Shuangta fault, Daquan fault, Hongliuhe fault and their branch faults and rotational structures between different faults. Sedimentary analysis on the fault valleys in the study area and ESR chronological test of fault clay exhibit that the Sanweishan-Shuangta fault form in the late Pliocene (N2), while the Daquan fault displays formation age of l.5-1.2 Ma, and the activity age of the relevant branch faults is Late Pleistocene (400 ka). The ages become younger from the Altyn Tagh fault to the Daquan fault and strike-slip faults display NW trending extension, further revealing the lateral growth process of the strike-slip boundary at the northern margin during the Cenozoic uplift of Tibetan Plateau. The displacement amounts on several secondary faults caused by the activities of the faults are slight due to the above-mentioned structural distribution characteristics of Beishan area, which means that this area is the most stable active area with few seismic activities. We propose the main granitic bodies in Beishan area could be favorable preselected locations for China's high level radioactive waste repository. (authors)

  6. Combined chromatin and expression analysis reveals specific regulatory mechanisms within cytokine genes in the macrophage early immune response.

    Directory of Open Access Journals (Sweden)

    Maria Jesus Iglesias

    Full Text Available Macrophages play a critical role in innate immunity, and the expression of early response genes orchestrate much of the initial response of the immune system. Macrophages undergo extensive transcriptional reprogramming in response to inflammatory stimuli such as Lipopolysaccharide (LPS.To identify gene transcription regulation patterns involved in early innate immune responses, we used two genome-wide approaches--gene expression profiling and chromatin immunoprecipitation-sequencing (ChIP-seq analysis. We examined the effect of 2 hrs LPS stimulation on early gene expression and its relation to chromatin remodeling (H3 acetylation; H3Ac and promoter binding of Sp1 and RNA polymerase II phosphorylated at serine 5 (S5P RNAPII, which is a marker for transcriptional initiation. Our results indicate novel and alternative gene regulatory mechanisms for certain proinflammatory genes. We identified two groups of up-regulated inflammatory genes with respect to chromatin modification and promoter features. One group, including highly up-regulated genes such as tumor necrosis factor (TNF, was characterized by H3Ac, high CpG content and lack of TATA boxes. The second group, containing inflammatory mediators (interleukins and CCL chemokines, was up-regulated upon LPS stimulation despite lacking H3Ac in their annotated promoters, which were low in CpG content but did contain TATA boxes. Genome-wide analysis showed that few H3Ac peaks were unique to either +/-LPS condition. However, within these, an unpacking/expansion of already existing H3Ac peaks was observed upon LPS stimulation. In contrast, a significant proportion of S5P RNAPII peaks (approx 40% was unique to either condition. Furthermore, data indicated a large portion of previously unannotated TSSs, particularly in LPS-stimulated macrophages, where only 28% of unique S5P RNAPII peaks overlap annotated promoters. The regulation of the inflammatory response appears to occur in a very specific manner at

  7. Studies of Physcomitrella patens reveal that ethylene-mediated submergence responses arose relatively early in land-plant evolution

    KAUST Repository

    Yasumura, Yuki


    Colonization of the land by multicellular green plants was a fundamental step in the evolution of life on earth. Land plants evolved from fresh-water aquatic algae, and the transition to a terrestrial environment required the acquisition of developmental plasticity appropriate to the conditions of water availability, ranging from drought to flood. Here we show that extant bryophytes exhibit submergence-induced developmental plasticity, suggesting that submergence responses evolved relatively early in the evolution of land plants. We also show that a major component of the bryophyte submergence response is controlled by the phytohormone ethylene, using a perception mechanism that has subsequently been conserved throughout the evolution of land plants. Thus a plant environmental response mechanism with major ecological and agricultural importance probably had its origins in the very earliest stages of the colonization of the land. © 2012 Blackwell Publishing Ltd.

  8. Automated analysis of connected speech reveals early biomarkers of Parkinson's disease in patients with rapid eye movement sleep behaviour disorder. (United States)

    Hlavnička, Jan; Čmejla, Roman; Tykalová, Tereza; Šonka, Karel; Růžička, Evžen; Rusz, Jan


    For generations, the evaluation of speech abnormalities in neurodegenerative disorders such as Parkinson's disease (PD) has been limited to perceptual tests or user-controlled laboratory analysis based upon rather small samples of human vocalizations. Our study introduces a fully automated method that yields significant features related to respiratory deficits, dysphonia, imprecise articulation and dysrhythmia from acoustic microphone data of natural connected speech for predicting early and distinctive patterns of neurodegeneration. We compared speech recordings of 50 subjects with rapid eye movement sleep behaviour disorder (RBD), 30 newly diagnosed, untreated PD patients and 50 healthy controls, and showed that subliminal parkinsonian speech deficits can be reliably captured even in RBD patients, which are at high risk of developing PD or other synucleinopathies. Thus, automated vocal analysis should soon be able to contribute to screening and diagnostic procedures for prodromal parkinsonian neurodegeneration in natural environments.

  9. Weighted gene co-expression network analysis reveals potential genes involved in early metamorphosis process in sea cucumber Apostichopus japonicus. (United States)

    Li, Yongxin; Kikuchi, Mani; Li, Xueyan; Gao, Qionghua; Xiong, Zijun; Ren, Yandong; Zhao, Ruoping; Mao, Bingyu; Kondo, Mariko; Irie, Naoki; Wang, Wen


    Sea cucumbers, one main class of Echinoderms, have a very fast and drastic metamorphosis process during their development. However, the molecular basis under this process remains largely unknown. Here we systematically examined the gene expression profiles of Japanese common sea cucumber (Apostichopus japonicus) for the first time by RNA sequencing across 16 developmental time points from fertilized egg to juvenile stage. Based on the weighted gene co-expression network analysis (WGCNA), we identified 21 modules. Among them, MEdarkmagenta was highly expressed and correlated with the early metamorphosis process from late auricularia to doliolaria larva. Furthermore, gene enrichment and differentially expressed gene analysis identified several genes in the module that may play key roles in the metamorphosis process. Our results not only provide a molecular basis for experimentally studying the development and morphological complexity of sea cucumber, but also lay a foundation for improving its emergence rate. Copyright © 2017 Elsevier Inc. All rights reserved.

  10. Differential gene expression profile reveals deregulation of pregnancy specific β1 glycoprotein 9 early during colorectal carcinogenesis

    Directory of Open Access Journals (Sweden)

    Gallinger Steven


    Full Text Available Abstract Background APC (Adenomatous polyposis coli plays an important role in the pathogenesis of both familial and sporadic colorectal cancer. Patients carrying germline APC mutations develop multiple colonic adenomas at younger age and higher frequency than non-carrier cases which indicates that silencing of one APC allele may be sufficient to initiate the transformation process. Methods To elucidate the biological dysregulation underlying adenoma formation we examined global gene expression profiles of adenomas and corresponding normal mucosa from an FAP patient. Differential expression of the most significant gene identified in this study was further validated by mRNA in situ hybridization, reverse transcriptase PCR and Northern blotting in different sets of adenomas, tumours and cancer cell lines. Results Eighty four genes were differentially expressed between all adenomas and corresponding normal mucosa, while only seven genes showed differential expression within the adenomas. The first group included pregnancy specific β-1 glycoprotein 9 (PSG9 (p PSG9 is a member of the carcinoembryonic antigen (CEA/PSG family and is produced at high levels during pregnancy, mainly by syncytiotrophoblasts. Further analysis of sporadic and familial colorectal cancer confirmed that PSG9 is ectopically upregulated in vivo by cancer cells. In total, deregulation of PSG9 mRNA was detected in 78% (14/18 of FAP adenomas and 75% (45/60 of sporadic colorectal cancer cases tested. Conclusion Detection of PSG9 expression in adenomas, and at higher levels in FAP cases, indicates that germline APC mutations and defects in Wnt signalling modulate PSG9 expression. Since PSG9 is not found in the non-pregnant adult except in association with cancer, and it appears to be an early molecular event associated with colorectal cancer monitoring of its expression may be useful as a biomarker for the early detection of this disease.

  11. An alternative model for the early peopling of southern South America revealed by analyses of three mitochondrial DNA haplogroups. (United States)

    de Saint Pierre, Michelle; Bravi, Claudio M; Motti, Josefina M B; Fuku, Noriyuki; Tanaka, Masashi; Llop, Elena; Bonatto, Sandro L; Moraga, Mauricio


    After several years of research, there is now a consensus that America was populated from Asia through Beringia, probably at the end of the Pleistocene. But many details such as the timing, route(s), and origin of the first settlers remain uncertain. In the last decade genetic evidence has taken on a major role in elucidating the peopling of the Americas. To study the early peopling of South America, we sequenced the control region of mitochondrial DNA from 300 individuals belonging to indigenous populations of Chile and Argentina, and also obtained seven complete mitochondrial DNA sequences. We identified two novel mtDNA monophyletic clades, preliminarily designated B2l and C1b13, which together with the recently described D1g sub-haplogroup have locally high frequencies and are basically restricted to populations from the extreme south of South America. The estimated ages of D1g and B2l, about ~15,000 years BP, together with their similar population dynamics and the high haplotype diversity shown by the networks, suggests that they probably appeared soon after the arrival of the first settlers and agrees with the dating of the earliest archaeological sites in South America (Monte Verde, Chile, 14,500 BP). One further sub-haplogroup, D4h3a5, appears to be restricted to Fuegian-Patagonian populations and reinforces our hypothesis of the continuity of the current Patagonian populations with the initial founders. Our results indicate that the extant native populations inhabiting South Chile and Argentina are a group which had a common origin, and suggest a population break between the extreme south of South America and the more northern part of the continent. Thus the early colonization process was not just an expansion from north to south, but also included movements across the Andes.

  12. Multisensory representation of frequency across audition and touch: high density electrical mapping reveals early sensory-perceptual coupling. (United States)

    Butler, John S; Foxe, John J; Fiebelkorn, Ian C; Mercier, Manuel R; Molholm, Sophie


    The frequency of environmental vibrations is sampled by two of the major sensory systems, audition and touch, notwithstanding that these signals are transduced through very different physical media and entirely separate sensory epithelia. Psychophysical studies have shown that manipulating frequency in audition or touch can have a significant cross-sensory impact on perceived frequency in the other sensory system, pointing to intimate links between these senses during computation of frequency. In this regard, the frequency of a vibratory event can be thought of as a multisensory perceptual construct. In turn, electrophysiological studies point to temporally early multisensory interactions that occur in hierarchically early sensory regions where convergent inputs from the auditory and somatosensory systems are to be found. A key question pertains to the level of processing at which the multisensory integration of featural information, such as frequency, occurs. Do the sensory systems calculate frequency independently before this information is combined, or is this feature calculated in an integrated fashion during preattentive sensory processing? The well characterized mismatch negativity, an electrophysiological response that indexes preattentive detection of a change within the context of a regular pattern of stimulation, served as our dependent measure. High-density electrophysiological recordings were made in humans while they were presented with separate blocks of somatosensory, auditory, and audio-somatosensory "standards" and "deviants," where the deviant differed in frequency. Multisensory effects were identified beginning at ∼200 ms, with the multisensory mismatch negativity (MMN) significantly different from the sum of the unisensory MMNs. This provides compelling evidence for preattentive coupling between the somatosensory and auditory channels in the cortical representation of frequency.

  13. Behavioral characterization of A53T mice reveals early and late stage deficits related to Parkinson's disease.

    Directory of Open Access Journals (Sweden)

    Katrina L Paumier

    Full Text Available Parkinson's disease (PD pathology is characterized by the formation of intra-neuronal inclusions called Lewy bodies, which are comprised of alpha-synuclein (α-syn. Duplication, triplication or genetic mutations in α-syn (A53T, A30P and E46K are linked to autosomal dominant PD; thus implicating its role in the pathogenesis of PD. In both PD patients and mouse models, there is increasing evidence that neuronal dysfunction occurs before the accumulation of protein aggregates (i.e., α-syn and neurodegeneration. Characterization of the timing and nature of symptomatic dysfunction is important for understanding the impact of α-syn on disease progression. Furthermore, this knowledge is essential for identifying pathways and molecular targets for therapeutic intervention. To this end, we examined various functional and morphological endpoints in the transgenic mouse model expressing the human A53T α-syn variant directed by the mouse prion promoter at specific ages relating to disease progression (2, 6 and 12 months of age. Our findings indicate A53T mice develop fine, sensorimotor, and synaptic deficits before the onset of age-related gross motor and cognitive dysfunction. Results from open field and rotarod tests show A53T mice develop age-dependent changes in locomotor activity and reduced anxiety-like behavior. Additionally, digigait analysis shows these mice develop an abnormal gait by 12 months of age. A53T mice also exhibit spatial memory deficits at 6 and 12 months, as demonstrated by Y-maze performance. In contrast to gross motor and cognitive changes, A53T mice display significant impairments in fine- and sensorimotor tasks such as grooming, nest building and acoustic startle as early as 1-2 months of age. These mice also show significant abnormalities in basal synaptic transmission, paired-pulse facilitation and long-term depression (LTD. Combined, these data indicate the A53T model exhibits early- and late-onset behavioral and synaptic

  14. Behavioral Characterization of A53T Mice Reveals Early and Late Stage Deficits Related to Parkinson’s Disease (United States)

    Paumier, Katrina L.; Sukoff Rizzo, Stacey J.; Berger, Zdenek; Chen, Yi; Gonzales, Cathleen; Kaftan, Edward; Li, Li; Lotarski, Susan; Monaghan, Michael; Shen, Wei; Stolyar, Polina; Vasilyev, Dmytro; Zaleska, Margaret; D. Hirst, Warren; Dunlop, John


    Parkinson's disease (PD) pathology is characterized by the formation of intra-neuronal inclusions called Lewy bodies, which are comprised of alpha-synuclein (α-syn). Duplication, triplication or genetic mutations in α-syn (A53T, A30P and E46K) are linked to autosomal dominant PD; thus implicating its role in the pathogenesis of PD. In both PD patients and mouse models, there is increasing evidence that neuronal dysfunction occurs before the accumulation of protein aggregates (i.e., α-syn) and neurodegeneration. Characterization of the timing and nature of symptomatic dysfunction is important for understanding the impact of α-syn on disease progression. Furthermore, this knowledge is essential for identifying pathways and molecular targets for therapeutic intervention. To this end, we examined various functional and morphological endpoints in the transgenic mouse model expressing the human A53T α-syn variant directed by the mouse prion promoter at specific ages relating to disease progression (2, 6 and 12 months of age). Our findings indicate A53T mice develop fine, sensorimotor, and synaptic deficits before the onset of age-related gross motor and cognitive dysfunction. Results from open field and rotarod tests show A53T mice develop age-dependent changes in locomotor activity and reduced anxiety-like behavior. Additionally, digigait analysis shows these mice develop an abnormal gait by 12 months of age. A53T mice also exhibit spatial memory deficits at 6 and 12 months, as demonstrated by Y-maze performance. In contrast to gross motor and cognitive changes, A53T mice display significant impairments in fine- and sensorimotor tasks such as grooming, nest building and acoustic startle as early as 1–2 months of age. These mice also show significant abnormalities in basal synaptic transmission, paired-pulse facilitation and long-term depression (LTD). Combined, these data indicate the A53T model exhibits early- and late-onset behavioral and synaptic impairments

  15. Quantitative N-linked Glycoproteomics of Myocardial Ischemia and Reperfusion Injury Reveals Early Remodeling in the Extracellular Environment

    DEFF Research Database (Denmark)

    Parker, Benjamin L; Palmisano, Giuseppe; Edwards, Alistair V G


    , while dimethyl labeling confirmed 46 of these and revealed an additional 62 significant changes. These were mainly from predicted extracellular matrix and basement membrane proteins that are implicated in cardiac remodeling. Analysis of N-glycans released from myocardial proteins suggest...... that the observed changes were not due to significant alterations in N-glycan structures. Altered proteins included the collagen-laminin-integrin complexes and collagen assembly enzymes, cadherins, mast cell proteases, proliferation-associated secreted protein acidic and rich in cysteine, and microfibril......Extracellular and cell surface proteins are generally modified with N-linked glycans and glycopeptide enrichment is an attractive tool to analyze these proteins. The role of N-linked glycoproteins in cardiovascular disease, particularly ischemia and reperfusion injury, is poorly understood...

  16. Targeted Metabolomics Reveals Early Dominant Optic Atrophy Signature in Optic Nerves of Opa1delTTAG/+ Mice. (United States)

    Chao de la Barca, Juan Manuel; Simard, Gilles; Sarzi, Emmanuelle; Chaumette, Tanguy; Rousseau, Guillaume; Chupin, Stéphanie; Gadras, Cédric; Tessier, Lydie; Ferré, Marc; Chevrollier, Arnaud; Desquiret-Dumas, Valérie; Gueguen, Naïg; Leruez, Stéphanie; Verny, Christophe; Miléa, Dan; Bonneau, Dominique; Amati-Bonneau, Patrizia; Procaccio, Vincent; Hamel, Christian; Lenaers, Guy; Reynier, Pascal; Prunier-Mirebeau, Delphine


    Dominant optic atrophy (MIM No. 165500) is a blinding condition related to mutations in OPA1, a gene encoding a large GTPase involved in mitochondrial inner membrane dynamics. Although several mouse models mimicking the disease have been developed, the pathophysiological mechanisms responsible for retinal ganglion cell degeneration remain poorly understood. Using a targeted metabolomic approach, we measured the concentrations of 188 metabolites in nine tissues, that is, brain, three types of skeletal muscle, heart, liver, retina, optic nerve, and plasma in symptomatic 11-month-old Opa1delTTAG/+ mice. Significant metabolic signatures were found only in the optic nerve and plasma of female mice. The optic nerve signature was characterized by altered concentrations of phospholipids, amino acids, acylcarnitines, and carnosine, whereas the plasma signature showed decreased concentrations of amino acids and sarcosine associated with increased concentrations of several phospholipids. In contrast, the investigation of 3-month-old presymptomatic Opa1delTTAG/+ mice showed no specific plasma signature but revealed a significant optic nerve signature in both sexes, although with a sex effect. The Opa1delTTAG/+ versus wild-type optic nerve signature was characterized by the decreased concentrations of 10 sphingomyelins and 10 lysophosphatidylcholines, suggestive of myelin sheath alteration, and by alteration in the concentrations of metabolites involved in neuroprotection, such as dimethylarginine, carnitine, spermine, spermidine, carnosine, and glutamate, suggesting a concomitant axonal metabolic dysfunction. Our comprehensive metabolomic investigations revealed in symptomatic as well as in presymptomatic Opa1delTTAG/+ mice, a specific sensitiveness of the optic nerve to Opa1 insufficiency, opening new routes for protective therapeutic strategies.

  17. The Amazonian Craton and its influence on past fluvial systems (Mesozoic-Cenozoic, Amazonia)

    NARCIS (Netherlands)

    Hoorn, C.; Roddaz, M.; Dino, R.; Soares, E.; Uba, C.; Ochoa-Lozano, D.; Mapes, R.; Hoorn, C.; Wesselingh, F.P.


    The Amazonian Craton is an old geological feature of Archaean/Proterozoic age that has determined the character of fluvial systems in Amazonia throughout most of its past. This situation radically changed during the Cenozoic, when uplift of the Andes reshaped the relief and drainage patterns of

  18. Late Cenozoic History of the Genus Micromys (Mammalia, Rodentia) in Central Europe

    Czech Academy of Sciences Publication Activity Database

    Horáček, I.; Knitlová, M.; Wagner, Jan; Kordos, L.; Nadachowski, A.


    Roč. 8, č. 5 (2013), e62498 E-ISSN 1932-6203 R&D Projects: GA ČR GA205/09/0184 Institutional support: RVO:67985831 Keywords : Mammalia * Rodentia * Genus Micromys * Late Cenozoic Subject RIV: DB - Geology ; Mineralogy Impact factor: 3.534, year: 2013

  19. Cenozoic alkaline volcanic rocks with carbonatite affinity in the Bohemian Massif: Their sources and magma generation

    Czech Academy of Sciences Publication Activity Database

    Ulrych, Jaromír; Štěpánková-Svobodová, Jana


    Roč. 46, 1/2 (2014), s. 45-58 ISSN 0369-2086 R&D Projects: GA AV ČR(CZ) IAA300130902 Institutional support: RVO:67985831 Keywords : alkaline volcanic rocks * melilitic rocks * carbonatites * magma generation * metasomatism * Cenozoic * Bohemian Massif Subject RIV: DB - Geology ; Mineralogy

  20. From mantle roots to surface eruptions: Cenozoic and Mesozoic continental basaltic magmatism

    Czech Academy of Sciences Publication Activity Database

    Kämpf, H.; Németh, K.; Puziewicz, J.; Mrlina, Jan; Geissler, W.H.


    Roč. 104, č. 8 (2015), s. 1909-1912 ISSN 1437-3254 Institutional support: RVO:67985530 Keywords : continental basaltic volcanism * BASALT 2013 conference * Cenozoic * Mesozoic Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 2.133, year: 2015

  1. Temporal expression profiling of plasma proteins reveals oxidative stress in early stages of Type 1 Diabetes progression

    International Nuclear Information System (INIS)

    Liu, Chih-Wei; Bramer, Lisa; Computational Modeling); Webb-Robertson, Bobbie-Jo; Computational Modeling); Waugh, Kathleen; Rewers, Marian J.; Zhang, Qibin; Biochemistry)


    We report that blood markers other than islet autoantibodies are greatly needed to indicate the pancreatic beta cell destruction process as early as possible, and more accurately reflect the progression of Type 1 Diabetes Mellitus (T1D). To this end, a longitudinal proteomic profiling of human plasma using TMT-10plex-based LC-MS/MS analysis was performed to track temporal proteomic changes of T1D patients (n = 11) across 9 serial time points, spanning the period of T1D natural progression, in comparison with those of the matching healthy controls (n = 10). To our knowledge, the current study represents the largest (> 2000 proteins measured) longitudinal expression profiles of human plasma proteome in T1D research. By applying statistical trend analysis on the temporal expression patterns between T1D and controls, and Benjamini-Hochberg procedure for multiple-testing correction, 13 protein groups were regarded as having statistically significant differences during the entire follow-up period. Moreover, 16 protein groups, which play pivotal roles in response to oxidative stress, have consistently abnormal expression trend before seroconversion to islet autoimmunity. Importantly, the expression trends of two key reactive oxygen species-decomposing enzymes, Catalase and Superoxide dismutase were verified independently by ELISA.

  2. 7T T₂*-weighted magnetic resonance imaging reveals cortical phase differences between early- and late-onset Alzheimer's disease. (United States)

    van Rooden, Sanneke; Doan, Nhat Trung; Versluis, Maarten J; Goos, Jeroen D C; Webb, Andrew G; Oleksik, Ania M; van der Flier, Wiesje M; Scheltens, Philip; Barkhof, Frederik; Weverling-Rynsburger, Annelies W E; Blauw, Gerard Jan; Reiber, Johan H C; van Buchem, Mark A; Milles, Julien; van der Grond, Jeroen


    The aim of this study is to explore regional iron-related differences in the cerebral cortex, indicative of Alzheimer's disease pathology, between early- and late-onset Alzheimer's disease (EOAD, LOAD, respectively) patients using 7T magnetic resonance phase images. High-resolution T2(∗)-weighted scans were acquired in 12 EOAD patients and 17 LOAD patients with mild to moderate disease and 27 healthy elderly control subjects. Lobar peak-to-peak phase shifts and regional mean phase contrasts were computed. An increased peak-to-peak phase shift was found for all lobar regions in EOAD patients compared with LOAD patients (p < 0.05). Regional mean phase contrast in EOAD patients was higher than in LOAD patients in the superior medial and middle frontal gyrus, anterior and middle cingulate gyrus, postcentral gyrus, superior and inferior parietal gyrus, and precuneus (p ≤ 0.042). These data suggest that EOAD patients have an increased iron accumulation, possibly related to an increased amyloid deposition, in specific cortical regions as compared with LOAD patients. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. Knockdown of Fanconi anemia genes in human embryonic stem cells reveals early developmental defects in the hematopoietic lineage. (United States)

    Tulpule, Asmin; Lensch, M William; Miller, Justine D; Austin, Karyn; D'Andrea, Alan; Schlaeger, Thorsten M; Shimamura, Akiko; Daley, George Q


    Fanconi anemia (FA) is a genetically heterogeneous, autosomal recessive disorder characterized by pediatric bone marrow failure and congenital anomalies. The effect of FA gene deficiency on hematopoietic development in utero remains poorly described as mouse models of FA do not develop hematopoietic failure and such studies cannot be performed on patients. We have created a human-specific in vitro system to study early hematopoietic development in FA using a lentiviral RNA interference (RNAi) strategy in human embryonic stem cells (hESCs). We show that knockdown of FANCA and FANCD2 in hESCs leads to a reduction in hematopoietic fates and progenitor numbers that can be rescued by FA gene complementation. Our data indicate that hematopoiesis is impaired in FA from the earliest stages of development, suggesting that deficiencies in embryonic hematopoiesis may underlie the progression to bone marrow failure in FA. This work illustrates how hESCs can provide unique insights into human development and further our understanding of genetic disease.

  4. Geometry and evolution of low-angle normal faults (LANF) within a Cenozoic high-angle rift system, Thailand: Implications for sedimentology and the mechanisms of LANF development (United States)

    Morley, Chris K.


    At least eight examples of large (5-35 km heave), low-angle normal faults (LANFs, 20°-30° dip) occur in the Cenozoic rift basins of Thailand and laterally pass into high-angle extensional fault systems. Three large-displacement LANFs are found in late Oligocene-Miocene onshore rift basins (Suphan Buri, Phitsanulok, and Chiang Mai basins), they have (1) developed contemporaneous with, or after the onset of, high-angle extension, (2) acted as paths for magma and associated fluids, and (3) impacted sedimentation patterns. Displacement on low-angle faults appears to be episodic, marked by onset of lacustrine conditions followed by axial progradation of deltaic systems that infilled the lakes during periods of low or no displacement. The Chiang Mai LANF is a low-angle (15°-25°), high-displacement (15-35 km heave), ESE dipping LANF immediately east of the late early Miocene Doi Inthanon and Doi Suthep metamorphic core complexes. Early Cenozoic transpressional crustal thickening followed by the northward motion of India coupled with Burma relative to east Burma and Thailand (˜40-30 Ma) caused migmatization and gneiss dome uplift in the late Oligocene of the core complex region, followed by LANF activity. LANF displacement lasted 4-6 Ma during the early Miocene and possibly transported a late Oligocene-early Miocene high-angle rift system 35 km east. Other LANFs in Thailand have lower displacements and no associated metamorphic core complexes. The three LANFs were initiated as low-angle faults, not by isostatic rotation of high-angle faults. The low-angle dips appear to follow preexisting low-angle fabrics (thrusts, shear zones, and other low-angle ductile foliations) predominantly developed during Late Paleozoic and early Paleogene episodes of thrusting and folding.

  5. Mesozoic to Cenozoic tectonic transition process in Zhanhua Sag, Bohai Bay Basin, East China (United States)

    Cheng, Yanjun; Wu, Zhiping; Lu, Shunan; Li, Xu; Lin, Chengyan; Huang, Zheng; Su, Wen; Jiang, Chao; Wang, Shouye


    The Zhanhua sag is part of the Bohai Bay intracontinental basin system that has developed since the Mesozoic in East China. The timing of this basin system coincides with the final assembly of East Asia and the development of Western Pacific-type plate margin. Here we use 3-D seismic and core log data to investigate the evolution of this basin and discuss its broad tectonic settings. Our new structural study of Zhanhua sag suggests that there are four major tectonic transitions occurred in the Bohai Bay Basin during Mesozoic and Cenozoic: (1) The first tectonic transition was from stable Craton to thrusting during the Triassic, mainly caused by the South China Block's subduction northward beneath the North China Block, which induced the formation of the NW-striking thrust faults. (2) The second tectonic transition was mainly characterized by a change from compression to extension, which can be further divided into two-stages. At the first stage, two episodes of NW-SE shortening occurred in East Asia during Early-Middle Jurassic and Late Jurassic-earliest Cretaceous, respectively. At the second stage, the extension and left-lateral shearing took place during Early Cretaceous while compression occurred during Late Cretaceous. The NW-striking thrust faults changed to normal faults and the NNE-striking left-lateral strike-slip faults started to influence the eastern part of the basin. (3) The third transition occurred when the NW-SE extension and NNE-striking right-lateral shearing started to form during Paleogene, and the peak deformation happen around 40 Ma due to the change of the subduction direction of Pacific Plate relative to Eurasia Plate. The NE-striking normal faults are the main structure, and the pre-existing NNE-striking strike-slip faults changed from left-lateral to right-lateral. (4) The fourth transition saw the regional subsidence during Neogene, which was probably caused by the India-Asia "Hard collision" between 25 and 20 Ma.

  6. Cenozoic sedimentation in the Mumbai Offshore Basin: Implications for tectonic evolution of the western continental margin of India (United States)

    Nair, Nisha; Pandey, Dhananjai K.


    Interpretation of multichannel seismic reflection data along the Mumbai Offshore Basin (MOB) revealed the tectonic processes that led to the development of sedimentary basins during Cenozoic evolution. Structural interpretation along three selected MCS profiles from MOB revealed seven major sedimentary sequences (∼3.0 s TWT, thick) and the associated complex fault patterns. These stratigraphic sequences are interpreted to host detritus of syn- to post rift events during rift-drift process. The acoustic basement appeared to be faulted with interspaced intrusive bodies. The sections also depicted the presence of slumping of sediments, subsidence, marginal basins, rollover anticlines, mud diapirs etc accompanied by normal to thrust faults related to recent tectonics. Presence of upthrusts in the slope region marks the locations of local compression during collision. Forward gravity modeling constrained with results from seismic and drill results, revealed that the crustal structure beneath the MOB has undergone an extensional type tectonics intruded with intrusive bodies. Results from the seismo-gravity modeling in association with litholog data from drilled wells from the western continental margin of India (WCMI) are presented here.

  7. Early stages of functional diversification in the Rab GTPase gene family revealed by genomic and localization studies in Paramecium species. (United States)

    Bright, Lydia J; Gout, Jean-Francois; Lynch, Michael


    New gene functions arise within existing gene families as a result of gene duplication and subsequent diversification. To gain insight into the steps that led to the functional diversification of paralogues, we tracked duplicate retention patterns, expression-level divergence, and subcellular markers of functional diversification in the Rab GTPase gene family in three Paramecium aurelia species. After whole-genome duplication, Rab GTPase duplicates are more highly retained than other genes in the genome but appear to be diverging more rapidly in expression levels, consistent with early steps in functional diversification. However, by localizing specific Rab proteins in Paramecium cells, we found that paralogues from the two most recent whole-genome duplications had virtually identical localization patterns, and that less closely related paralogues showed evidence of both conservation and diversification. The functionally conserved paralogues appear to target to compartments associated with both endocytic and phagocytic recycling functions, confirming evolutionary and functional links between the two pathways in a divergent eukaryotic lineage. Because the functionally diversifying paralogues are still closely related to and derived from a clade of functionally conserved Rab11 genes, we were able to pinpoint three specific amino acid residues that may be driving the change in the localization and thus the function in these proteins. © 2017 Bright et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (

  8. Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes.

    Directory of Open Access Journals (Sweden)

    Stella A G D Salvo

    Full Text Available Embryogenic tissue culture systems are utilized in propagation and genetic engineering of crop plants, but applications are limited by genotype-dependent culture response. To date, few genes necessary for embryogenic callus formation have been identified or characterized. The goal of this research was to enhance our understanding of gene expression during maize embryogenic tissue culture initiation. In this study, we highlight the expression of candidate genes that have been previously regarded in the literature as having important roles in somatic embryogenesis. We utilized RNA based sequencing (RNA-seq to characterize the transcriptome of immature embryo explants of the highly embryogenic and regenerable maize genotype A188 at 0, 24, 36, 48, and 72 hours after placement of explants on tissue culture initiation medium. Genes annotated as functioning in stress response, such as glutathione-S-transferases and germin-like proteins, and genes involved with hormone transport, such as PINFORMED, increased in expression over 8-fold in the study. Maize genes with high sequence similarity to genes previously described in the initiation of embryogenic cultures, such as transcription factors BABY BOOM, LEAFY COTYLEDON, and AGAMOUS, and important receptor-like kinases such as SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASES and CLAVATA, were also expressed in this time course study. By combining results from whole genome transcriptome analysis with an in depth review of key genes that play a role in the onset of embryogenesis, we propose a model of coordinated expression of somatic embryogenesis-related genes, providing an improved understanding of genomic factors involved in the early steps of embryogenic culture initiation in maize and other plant species.

  9. Asynchrony of the early maturation of white matter bundles in healthy infants: Quantitative landmarks revealed noninvasively by diffusion tensor imaging

    International Nuclear Information System (INIS)

    Dubois, J.; Perrin, M.; Mangin, J.F.; Cointepas, Y.; Duchesnay, E.; Le Bihan, D.; Hertz-Pannier, L.; Dehaene-Lambertz, G.; Dubois, J.; Dehaene-Lambertz, G.; Perrin, M.; Mangin, J.F.; Cointepas, Y.; Duchesnay, E.; Le Bihan, D.; Hertz-Pannier, L.


    Normal cognitive development in infants follows a well-known temporal sequence, which is assumed to be correlated with the structural maturation of underlying functional networks. Postmortem studies and, more recently, structural MR imaging studies have described qualitatively the heterogeneous spatio-temporal progression of white matter myelination. However, in vivo quantification of the maturation phases of fiber bundles is still lacking. We used noninvasive diffusion tensor MR imaging and tractography in twenty-three 1-4-month-old healthy infants to quantify the early maturation of the main cerebral fascicles. A specific maturation model, based on the respective roles of different maturational processes on the diffusion phenomena, was designed to highlight asynchronous maturation across bundles by evaluating the time-course of mean diffusivity and anisotropy changes over the considered developmental period. Using an original approach, a progression of maturation in four relative stages was determined in each tract by estimating the maturation state and speed, from the diffusion indices over the infants group compared with an adults group on one hand, and in each tract compared with the average over bundles on the other hand. Results were coherent with, and extended previous findings in 8 of 11 bundles, showing the anterior limb of the internal capsule and cingulum as the most immature, followed by the optic radiations, arcuate and inferior longitudinal fascicles, then the spino-thalamic tract and fornix, and finally the cortico-spinal tract as the most mature bundle. Thus, this approach provides new quantitative landmarks for further noninvasive research on brain-behavior relationships during normal and abnormal development. (authors)

  10. Contrasting Networks for Recognition Memory and Recency Memory Revealed by Immediate-Early Gene Imaging in the Rat (United States)


    The expression of the immediate-early gene c-fos was used to compare networks of activity associated with recency memory (temporal order memory) and recognition memory. In Experiment 1, rats were first familiarized with sets of objects and then given pairs of different, familiar objects to explore. For the recency test group, each object in a pair was separated by 110 min in the time between their previous presentations. For the recency control test, each object in a pair was separated by less than a 1 min between their prior presentations. Temporal discrimination of the objects correlated with c-fos activity in the recency test group in several sites, including area Te2, the perirhinal cortex, lateral entorhinal cortex, as well as the dentate gyrus, hippocampal fields CA3 and CA1. For both the test and control conditions, network models were derived using structural equation modeling. The recency test model emphasized serial connections from the perirhinal cortex to lateral entorhinal cortex and then to the CA1 subfield. The recency control condition involved more parallel pathways, but again highlighted CA1 within the hippocampus. Both models contrasted with those derived from tests of object recognition (Experiment 2), because stimulus novelty was associated with pathways from the perirhinal cortex to lateral entorhinal cortex that then involved both the dentate gyrus (and CA3) and CA1 in parallel. The present findings implicate CA1 for the processing of familiar stimuli, including recency discriminations, while the dentate gyrus and CA3 pathways are recruited when the perirhinal cortex signals novel stimuli. PMID:24933661

  11. A zebrafish model of congenital disorders of glycosylation with phosphomannose isomerase deficiency reveals an early opportunity for corrective mannose supplementation

    Directory of Open Access Journals (Sweden)

    Jaime Chu


    Individuals with congenital disorders of glycosylation (CDG have recessive mutations in genes required for protein N-glycosylation, resulting in multi-systemic disease. Despite the well-characterized biochemical consequences in these individuals, the underlying cellular defects that contribute to CDG are not well understood. Synthesis of the lipid-linked oligosaccharide (LLO, which serves as the sugar donor for the N-glycosylation of secretory proteins, requires conversion of fructose-6-phosphate to mannose-6-phosphate via the phosphomannose isomerase (MPI enzyme. Individuals who are deficient in MPI present with bleeding, diarrhea, edema, gastrointestinal bleeding and liver fibrosis. MPI-CDG patients can be treated with oral mannose supplements, which is converted to mannose-6-phosphate through a minor complementary metabolic pathway, restoring protein glycosylation and ameliorating most symptoms, although liver disease continues to progress. Because Mpi deletion in mice causes early embryonic lethality and thus is difficult to study, we used zebrafish to establish a model of MPI-CDG. We used a morpholino to block mpi mRNA translation and established a concentration that consistently yielded 13% residual Mpi enzyme activity at 4 days post-fertilization (dpf, which is within the range of MPI activity detected in fibroblasts from MPI-CDG patients. Fluorophore-assisted carbohydrate electrophoresis detected decreased LLO and N-glycans in mpi morphants. These deficiencies resulted in 50% embryonic lethality by 4 dpf. Multi-systemic abnormalities, including small eyes, dysmorphic jaws, pericardial edema, a small liver and curled tails, occurred in 82% of the surviving larvae. Importantly, these phenotypes could be rescued with mannose supplementation. Thus, parallel processes in fish and humans contribute to the phenotypes caused by Mpi depletion. Interestingly, mannose was only effective if provided prior to 24 hpf. These data provide insight into treatment efficacy

  12. Diets and environments of late Cenozoic mammals in the Qaidam Basin, Tibetan Plateau: Evidence from stable isotopes (United States)

    Zhang, Chunfu; Wang, Yang; Li, Qiang; Wang, Xiaoming; Deng, Tao; Tseng, Zhijie J.; Takeuchi, Gary T.; Xie, Gangpu; Xu, Yingfeng


    The timing history and driving mechanisms of C4 expansion and Tibetan uplift are hotly debated issues. Paleoenvironmental evidence from within the Tibetan Plateau is essential to help resolve these issues. Here we report results of stable C and O isotope analyses of tooth enamel samples from a variety of late Cenozoic mammals, including deer, giraffe, horse, rhino, and elephant, from the Qaidam Basin in the northeastern Tibetan Plateau. The enamel-δ13C values are diets and only a few individuals (besides the exceptional rhino CD0722) may have consumed some C4 plants. Based on geological evidence, however, the Qaidam Basin was probably warmer and more humid during the late Miocene and early Pliocene than today. Thus, these δ13C values likely indicate that many individuals had significant dietary intakes of C4 plants, and the Qaidam Basin had more C4 plants in the late Miocene and early Pliocene than today. Moreover, the Qaidam Basin likely had much denser vegetation at those times in order to support such large mammals as rhinos and elephants. While the δ18O values did not increase monotonously with time, the range of variation seems to have increased considerably since the early Pliocene, indicating increased aridification in the basin. The mean δ18O values of large mammals and those reconstructed for local meteoric waters display a significant negative shift in the late Miocene, consistent with the marine δ18O record which shows a cooling trend in the same period. Taken together, the isotope data suggest a warmer, wetter, and perhaps lower Qaidam Basin during the late Miocene and early Pliocene. Increased aridification after the early Pliocene is likely due to a combined effect of regional tectonism, which resulted in a more effective barrier preventing moisture from the Indian Ocean or Bay of Bengal from reaching the basin, and global cooling.

  13. Deep RNA sequencing reveals hidden features and dynamics of early gene transcription in Paramecium bursaria chlorella virus 1.

    Directory of Open Access Journals (Sweden)

    Guillaume Blanc

    Full Text Available Paramecium bursaria chlorella virus 1 (PBCV-1 is the prototype of the genus Chlorovirus (family Phycodnaviridae that infects the unicellular, eukaryotic green alga Chlorella variabilis NC64A. The 331-kb PBCV-1 genome contains 416 major open reading frames. A mRNA-seq approach was used to analyze PBCV-1 transcriptomes at 6 progressive times during the first hour of infection. The alignment of 17 million reads to the PBCV-1 genome allowed the construction of single-base transcriptome maps. Significant transcription was detected for a subset of 50 viral genes as soon as 7 min after infection. By 20 min post infection (p.i., transcripts were detected for most PBCV-1 genes and transcript levels continued to increase globally up to 60 min p.i., at which time 41% or the poly (A+-containing RNAs in the infected cells mapped to the PBCV-1 genome. For some viral genes, the number of transcripts in the latter time points (20 to 60 min p.i. was much higher than that of the most highly expressed host genes. RNA-seq data revealed putative polyadenylation signal sequences in PBCV-1 genes that were identical to the polyadenylation signal AAUAAA of green algae. Several transcripts have an RNA fragment excised. However, the frequency of excision and the resulting putative shortened protein products suggest that most of these excision events have no functional role but are probably the result of the activity of misled splicesomes.

  14. Environmental proteomics reveals early microbial community responses to biostimulation at a uranium- and nitrate-contaminated site

    Energy Technology Data Exchange (ETDEWEB)

    Chourey, Karuna [ORNL; Nissen, Silke [ORNL; Vishnivetskaya, T. [University of Tennessee, Knoxville (UTK); Shah, Manesh B [ORNL; Pffifner, Susan [University of Tennessee, Knoxville (UTK); Hettich, Robert {Bob} L [ORNL; Loeffler, Frank E [ORNL


    High performance mass spectrometry instrumentation coupled with improved protein extraction techniques enable metaproteomics to identify active members of soil and groundwater microbial communities. Metaproteomics workflows were applied to study the initial responses (i.e., 4 days post treatment) of the indigenous aquifer microbiota to biostimulation with emulsified vegetable oil (EVO) at a uranium-contaminated site. Members of the Betaproteobacteria (i.e., Dechloromonas, Ralstonia, Rhodoferax, Polaromonas, Delftia, Chromobacterium) and Firmicutes dominated the biostimulated aquifer community. Proteome characterization revealed distinct differences in protein expression between the microbial biomass collected from groundwater influenced by biostimulation and groundwater collected up-gradient of the EVO injection points. In particular, proteins involved in ammonium assimilation, EVO degradation, and polyhydroxybutyrate (PHB) granule formation were prominent following biostimulation. Interestingly, the atypical NosZ of a Dechloromonas sp. was highly expressed suggesting active nitrous oxide (N2O) respiration. c-type cytochromes were barely detected, as was citrate synthase, a biomarker for hexavalent uranium reduction activity, suggesting that metal reduction has not commenced 4 days post EVO delivery. Environmental metaproteomics identified microbial community responses to biostimulation and elucidated active pathways demonstrating the value of this technique for complementing nucleic acid-based approaches.

  15. Differentially expressed androgen-regulated genes in androgen-sensitive tissues reveal potential biomarkers of early prostate cancer.

    Directory of Open Access Journals (Sweden)

    Dogus Murat Altintas

    Full Text Available BACKGROUND: Several data favor androgen receptor implication in prostate cancer initiation through the induction of several gene activation programs. The aim of the study is to identify potential biomarkers for early diagnosis of prostate cancer (PCa among androgen-regulated genes (ARG and to evaluate comparative expression of these genes in normal prostate and normal prostate-related androgen-sensitive tissues that do not (or rarely give rise to cancer. METHODS: ARG were selected in non-neoplastic adult human prostatic epithelial RWPE-1 cells stably expressing an exogenous human androgen receptor, using RNA-microarrays and validation by qRT-PCR. Expression of 48 preselected genes was quantified in tissue samples (seminal vesicles, prostate transitional zones and prostate cancers, benign prostatic hypertrophy obtained from surgical specimens using TaqMan® low-density arrays. The diagnostic performances of these potential biomarkers were compared to that of genes known to be associated with PCa (i.e. PCA3 and DLX1. RESULTS AND DISCUSSION: By crossing expression studies in 26 matched PCa and normal prostate transitional zone samples, and 35 matched seminal vesicle and PCa samples, 14 genes were identified. Similarly, 9 genes were overexpressed in 15 benign prostatic hypertrophy samples, as compared to PCa samples. Overall, we selected 8 genes of interest to evaluate their diagnostic performances in comparison with that of PCA3 and DLX1. Among them, 3 genes: CRYAB, KCNMA1 and SDPR, were overexpressed in all 3 reference non-cancerous tissues. The areas under ROC curves of these genes reached those of PCA3 (0.91 and DLX1 (0.94. CONCLUSIONS: We identified ARG with reduced expression in PCa and with significant diagnostic values for discriminating between cancerous and non-cancerous prostatic tissues, similar that of PCA3. Given their expression pattern, they could be considered as potentially protective against prostate cancer. Moreover, they could

  16. Exome sequencing analysis reveals variants in primary immunodeficiency genes in patients with very early onset inflammatory bowel disease. (United States)

    Kelsen, Judith R; Dawany, Noor; Moran, Christopher J; Petersen, Britt-Sabina; Sarmady, Mahdi; Sasson, Ariella; Pauly-Hubbard, Helen; Martinez, Alejandro; Maurer, Kelly; Soong, Joanne; Rappaport, Eric; Franke, Andre; Keller, Andreas; Winter, Harland S; Mamula, Petar; Piccoli, David; Artis, David; Sonnenberg, Gregory F; Daly, Mark; Sullivan, Kathleen E; Baldassano, Robert N; Devoto, Marcella


    Very early onset inflammatory bowel disease (VEO-IBD), IBD diagnosed at 5 years of age or younger, frequently presents with a different and more severe phenotype than older-onset IBD. We investigated whether patients with VEO-IBD carry rare or novel variants in genes associated with immunodeficiencies that might contribute to disease development. Patients with VEO-IBD and parents (when available) were recruited from the Children's Hospital of Philadelphia from March 2013 through July 2014. We analyzed DNA from 125 patients with VEO-IBD (age, 3 wk to 4 y) and 19 parents, 4 of whom also had IBD. Exome capture was performed by Agilent SureSelect V4, and sequencing was performed using the Illumina HiSeq platform. Alignment to human genome GRCh37 was achieved followed by postprocessing and variant calling. After functional annotation, candidate variants were analyzed for change in protein function, minor allele frequency less than 0.1%, and scaled combined annotation-dependent depletion scores of 10 or less. We focused on genes associated with primary immunodeficiencies and related pathways. An additional 210 exome samples from patients with pediatric IBD (n = 45) or adult-onset Crohn's disease (n = 20) and healthy individuals (controls, n = 145) were obtained from the University of Kiel, Germany, and used as control groups. Four hundred genes and regions associated with primary immunodeficiency, covering approximately 6500 coding exons totaling more than 1 Mbp of coding sequence, were selected from the whole-exome data. Our analysis showed novel and rare variants within these genes that could contribute to the development of VEO-IBD, including rare heterozygous missense variants in IL10RA and previously unidentified variants in MSH5 and CD19. In an exome sequence analysis of patients with VEO-IBD and their parents, we identified variants in genes that regulate B- and T-cell functions and could contribute to pathogenesis. Our analysis could lead to the

  17. Screening of the Open Source Malaria Box Reveals an Early Lead Compound for the Treatment of Alveolar Echinococcosis.

    Directory of Open Access Journals (Sweden)

    Britta Stadelmann


    Full Text Available The metacestode (larval stage of the tapeworm Echinococcus multilocularis causes alveolar echinococcosis (AE, a very severe and in many cases incurable disease. To date, benzimidazoles such as albendazole and mebendazole are the only approved chemotherapeutical treatment options. Benzimidazoles inhibit metacestode proliferation, but do not act parasiticidal. Thus, benzimidazoles have to be taken a lifelong, can cause adverse side effects such as hepatotoxicity, and are ineffective in some patients. We here describe a newly developed screening cascade for the evaluation of the in vitro efficacy of new compounds that includes assessment of parasiticidal activity. The Malaria Box from Medicines for Malaria Venture (MMV, comprised of 400 commercially available chemicals that show in vitro activity against Plasmodium falciparum, was repurposed. Primary screening was carried out at 10 μM by employing the previously described PGI assay, and resulted in the identification of 24 compounds that caused physical damage in metacestodes. Seven out of these 24 drugs were also active at 1 μM. Dose-response assays revealed that only 2 compounds, namely MMV665807 and MMV665794, exhibited an EC50 value below 5 μM. Assessments using human foreskin fibroblasts and Reuber rat hepatoma cells showed that the salicylanilide MMV665807 was less toxic for these two mammalian cell lines than for metacestodes. The parasiticidal activity of MMV665807 was then confirmed using isolated germinal layer cell cultures as well as metacestode vesicles by employing viability assays, and its effect on metacestodes was morphologically evaluated by electron microscopy. However, both oral and intraperitoneal application of MMV665807 to mice experimentally infected with E. multilocularis metacestodes did not result in any reduction of the parasite load.

  18. RNA-Seq reveals the dynamic and diverse features of digestive enzymes during early development of Pacific white shrimp Litopenaeus vannamei. (United States)

    Wei, Jiankai; Zhang, Xiaojun; Yu, Yang; Li, Fuhua; Xiang, Jianhai


    The Pacific white shrimp (Litopenaeus vannamei), with high commercial value, has a typical metamorphosis pattern by going through embryo, nauplius, zoea, mysis and postlarvae during early development. Its diets change continually in this period, and a high mortality of larvae also occurs in this period. Since there is a close relationship between diets and digestive enzymes, a comprehensive investigation about the types and expression patterns of all digestive enzyme genes during early development of L. vannamei is of considerable significance for shrimp diets and larvae culture. Using RNA-Seq data, the types and expression characteristics of the digestive enzyme genes were analyzed during five different development stages (embryo, nauplius, zoea, mysis and postlarvae) in L. vannamei. Among the obtained 66,815 unigenes, 296 were annotated as 16 different digestive enzymes including five types of carbohydrase, seven types of peptidase and four types of lipase. Such a diverse suite of enzymes illustrated the capacity of L. vannamei to exploit varied diets to fit their nutritional requirements. The analysis of their dynamic expression patterns during development also indicated the importance of transcriptional regulation to adapt to the diet transition. Our study revealed the diverse and dynamic features of digestive enzymes during early development of L. vannamei. These results would provide support to better understand the physiological changes during diet transition. Copyright © 2014 Elsevier Inc. All rights reserved.

  19. Structural evolution of Cenozoic basins in northeastern Tunisia, in response to sinistral strike-slip movement on the El Alia-Teboursouk Fault (United States)

    Bejaoui, Hamida; Aïfa, Tahar; Melki, Fetheddine; Zargouni, Fouad


    This paper resolves the structural complexity of Cenozoic sedimentary basins in northeastern Tunisia. These basins trend NE-SW to ∼ E-W, and are bordered by old fracture networks. Detailed descriptions of the structural features in outcrop and in subsurface data suggest that the El Alia-Teboursouk Fault zone in the Bizerte area evolved through a series of tectonic events. Cross sections, lithostratigraphic correlations, and interpretation of seismic profiles through the basins show evidence for: (i) a Triassic until Jurassic-Early Cretaceous rifting phase that induced lateral variations of facies and strata thicknesses; (ii) a set of faults oriented NE-SW, NW-SE, N-S, and E-W that guided sediment accumulation in pull-apart basins, which were subject to compressive and transpressive deformation during Eocene (Lutetian-Priabonian), Miocene (Tortonian), and Pliocene-Quaternary; and (iii) NNW-SSE to NS contractional events that occurred during the Late Pliocene. Part of the latest phase has been the formation of different synsedimentary folded structures with significant subsidence inversion. Such events have been responsible for the reactivation of inherited faults, and the intrusion of Triassic evaporites, ensuring the role of a slip layer. The combined effects of the different paleoconstraints and halokinetic movements are at the origin of the evolution of these pull-apart basins. The subsurface data suggest that an important fault displacement occurred during the Mesozoic-Cenozoic. The patterns of sediment accumulation in the different basins reflect a high activity of deep ancient faults.

  20. Tectono-sedimentary events and geodynamic evolution of the Mesozoic and Cenozoic basins of the Alpine Margin, Gulf of Tunis, north-eastern Tunisia offshore (United States)

    Melki, Fetheddine; Zouaghi, Taher; Chelbi, Mohamed Ben; Bédir, Mourad; Zargouni, Fouad


    The structural pattern, tectono-sedimentary framework and geodynamic evolution for Mesozoic and Cenozoic deep structures of the Gulf of Tunis (north-eastern Tunisia) are proposed using petroleum well data and a 2-D seismic interpretation. The structural system of the study area is marked by two sets of faults that control the Mesozoic subsidence and inversions during the Paleogene and Neogene times: (i) a NE-SW striking set associated with folds and faults, which have a reverse component; and (ii) a NW-SE striking set active during the Tertiary extension episodes and delineating grabens and subsiding synclines. In order to better characterize the tectono-sedimentary evolution of the Gulf of Tunis structures, seismic data interpretations are compared to stratigraphic and structural data from wells and neighbouring outcrops. The Atlas and external Tell belonged to the southernmost Tethyan margin record a geodynamic evolution including: (i) rifting periods of subsidence and Tethyan oceanic accretions from Triassic until Early Cretaceous: we recognized high subsiding zones (Raja and Carthage domains), less subsiding zones (Gamart domain) and a completely emerged area (Raouad domain); (ii) compressive events during the Cenozoic with relaxation periods of the Oligocene-Aquitanian and Messinian-Early Pliocene. The NW-SE Late Eocene and Tortonian compressive events caused local inversions with sealed and eroded folded structures. During Middle to Late Miocene and Early Pliocene, we have identified depocentre structures corresponding to half-grabens and synclines in the Carthage and Karkouane domains. The north-south contractional events at the end of Early Pliocene and Late Pliocene periods are associated with significant inversion of subsidence and synsedimentary folded structures. Structuring and major tectonic events, recognized in the Gulf of Tunis, are linked to the common geodynamic evolution of the north African and western Mediterranean basins.

  1. How Vulnerable is Perennial Sea Ice? Insights from Earth's Late Cenozoic Natural Experiments (Invited) (United States)

    Brigham-Grette, J.; Polyak, L. V.; Caissie, B.; Sharko, C. J.; Petsch, S.


    Sea ice is an important component of the climate system. Yet, reconstructions of Arctic sea ice conditions reflecting glacial and interglacial change over the past 3 million years are almost nonexistent. Our work to evaluate the sea ice and sea surface temperature record of the Bering Strait region builds on a review of the sea ice history of the pan-Arctic. The best estimates of sea ice make use of indirect proxies based on reconstructions of treeline, sea surface temperatures, depositional systems, and the ecological preferences of extant marine microfossil species. The development of new proxies of past sea ice extent including microfossil assemblages (diatoms, ostracodes) and biomarker proxies (IP25) show promise for quantifying seasonal concentrations of sea ice cover on centennial to millennial timescales. Using both marine and terrestrial information, periods of restricted sea ice and ice-free Arctic conditions can be inferred for parts of the late Cenozoic. The Arctic Ocean borderlands contain clear stratigraphic evidence for forested conditions at intervals over the past 50 million years, recording the migration of treeline from High Arctic coastal locations within the Canadian Archipelago. Metasequoia forests of the peak Eocene gave way to a variety of biomass-rich circumarctic redwood forests by 46 Ma. Between 23 and 16 Ma, cool-temperate metasequoia forests dominated NE Alaska and the Yukon while mixed conifer-hardwood forests (similar to those of modern southern maritime Canada and New England) dominated the central Canadian Archipelago. By 16 Ma, these forests gave way to larch and spruce. From 5 to 3 Ma the braid plains of the Beaufort Fm were dominated by over 100 vascular plants including pine and birch, while other locations remained dominated by spruce and larch. Boreal conditions across northern Greenland and arctic Alaska are consistent with the presence of bivalve Arctica islandica in marine sediments capping the Beaufort Formation on Meighen

  2. Cenozoic tectonic jumping and implications for hydrocarbon accumulation in basins in the East Asia Continental Margin (United States)

    Suo, Yanhui; Li, Sanzhong; Yu, Shan; Somerville, Ian D.; Liu, Xin; Zhao, Shujuan; Dai, Liming


    Tectonic migration is a common geological process of basin formation and evolution. However, little is known about tectonic migration in the western Pacific margins. This paper focuses on the representative Cenozoic basins of East China and its surrounding seas in the western Pacific domain to discuss the phenomenon of tectonic jumping in Cenozoic basins, based on structural data from the Bohai Bay Basin, the South Yellow Sea Basin, the East China Sea Shelf Basin, and the South China Sea Continental Shelf Basin. The western Pacific active continental margin is the eastern margin of a global convergent system involving the Eurasian Plate, the Pacific Plate, and the Indian Plate. Under the combined effects of the India-Eurasia collision and retrogressive or roll-back subduction of the Pacific Plate, the western Pacific active continental margin had a wide basin-arc-trench system which migrated or ‘jumped’ eastward and further oceanward. This migration and jumping is characterized by progressive eastward younging of faulting, sedimentation, and subsidence within the basins. Owing to the tectonic migration, the geological conditions associated with hydrocarbon and gashydrate accumulation in the Cenozoic basins of East China and its adjacent seas also become progressively younger from west to east, showing eastward younging in the generation time of reservoirs, seals, traps, accumulations and preservation of hydrocarbon and gashydrate. Such a spatio-temporal distribution of Cenozoic hydrocarbon and gashydrate is significant for the oil, gas and gashydrate exploration in the East Asian Continental Margin. Finally, this study discusses the mechanism of Cenozoic intrabasinal and interbasinal tectonic migration in terms of interplate, intraplate and underplating processes. The migration or jumping regimes of three separate or interrelated events: (1) tectonism-magmatism, (2) basin formation, and (3) hydrocarbon-gashydrate accumulation are the combined effects of the

  3. Evidence for subduction-related magmatism during the Cretaceous and Cenozoic in Myanmar (United States)

    Sevastjanova, Inga; Sagi, David Adam; Webb, Peter; Masterton, Sheona; Hill, Catherine; Davies, Clare


    Myanmar's complex geological history, numerous controversies around its tectonic evolution and the presence of prospective hydrocarbon basins make it a key area of interest for geologists. Understanding whether a passive or an active margin existed in the region during the Cenozoic is particularly important for the production of accurate basin models; active Cenozoic subduction would imply that hydrocarbon basins in the forearc experienced extension due to slab rollback. The geology of Myanmar was influenced by the regional tectonics associated with the Cretaceous and Cenozoic closure of the Neotethys Ocean. During this time, India travelled rapidly from Gondwana to Asia at speeds up to 20 cm/yr. To accommodate the north-eastward motion of India, the Neotethys Ocean was consumed at the subduction zone along the southern margin of Eurasia. Based on our Global Plate Model, this subduction zone can reasonably be expected to extend for the entire width of the Neotethys Ocean as far as Myanmar and Southeast Asia at their eastern extent. Moreover, a) Cretaceous volcanism onshore Myanmar, b) the middle Cenozoic arc-related extension in the Present Day eastern Andaman Sea and c) the late Cenozoic uplift of the Indo-Burman Ranges are all contemporaneous with the subduction ages predicted by the global plate motions. However, because of the geological complexity of the area, additional evidence would augment interpretations that are based on structural data. In an attempt to reduce the uncertainty in the existing interpretations, we have compiled published zircon geochronological data from detrital and igneous rocks in the region. We have used published zircon U-Pb ages and, where available, published Hf isotope data and CL images (core/rim) in order to distinguish 'juvenile' mantle-derived zircons from those of reworked crustal origin. The compilation shows that Upper Cretaceous and Cenozoic zircons, which are interpreted to have a volcanic provenance, are common across the

  4. Climate vs. tectonic induced variations in Cenozoic sediment supply from western Scandinavia

    DEFF Research Database (Denmark)

    Gołędowski, Bartosz; Nielsen, S.B.; Clausen, O.R.

    Eocene times tectonic activity related to the final stage of opening of the North Atlantic was apparently controlling the sediment input in the North Sea as sediment pulses correlate well with tectonic events. Although there is no signs of Cenozoic tectonic activity onshore Scandinavia (igneous bodies......, faulting), tectonic disturbance related to ocean opening could be responsible for deposition of thick Paleocene wedges along the western coast of Norway. During subsequent Cenozoic periods domal structures in the Norwegian shelf are a proof for mild and protracted compression. However, depositional...... patterns from offshore Scandinavia have been interpreted as a result of significant tectonic movements. In the absence of proofs for active tectonic agents we attempt to explain these sediment input variations as a result of climate fluctuations. The Eocene-Oligocene greenhouse-icehouse climate transition...

  5. Sr-Nd isotope systematics of xenoliths in Cenozoic volcanic rocks from SW Japan

    International Nuclear Information System (INIS)

    Kagami, Hiroo; Iwata, Masatoshi; Iizumi, Shigeru; Nureki, Terukazu.


    Based on new and previously published Sr and Nd isotope data, we examined the petrogenetic relationship between deep crust- and upper mantle-derived xenoliths contained in Cenozoic volcanic rocks and Cretaceous-Paleogene granitoid rocks in SW Japan. The deep crust- and upper mantle-derived mafic to ultramafic xenoliths contained in Cenozoic volcanic rocks from SW Japan have comparable initial Sr and Nd isotope ratios to the Cretaceous-Paleogene granitoid rocks in their respective districts. This may suggest that these xenoliths were genetically related to the Cretaceous-Paleogene granitoid rocks in SW Japan, and that regional variations in Sr and Nd isotope ratios observed in the granitoid rocks are attributed to differences in the geochemistry of the magma sources. (author)

  6. Switch of Sensitivity Dynamics Revealed with DyGloSA Toolbox for Dynamical Global Sensitivity Analysis as an Early Warning for System's Critical Transition (United States)

    Baumuratova, Tatiana; Dobre, Simona; Bastogne, Thierry; Sauter, Thomas


    Systems with bifurcations may experience abrupt irreversible and often unwanted shifts in their performance, called critical transitions. For many systems like climate, economy, ecosystems it is highly desirable to identify indicators serving as early warnings of such regime shifts. Several statistical measures were recently proposed as early warnings of critical transitions including increased variance, autocorrelation and skewness of experimental or model-generated data. The lack of automatized tool for model-based prediction of critical transitions led to designing DyGloSA – a MATLAB toolbox for dynamical global parameter sensitivity analysis (GPSA) of ordinary differential equations models. We suggest that the switch in dynamics of parameter sensitivities revealed by our toolbox is an early warning that a system is approaching a critical transition. We illustrate the efficiency of our toolbox by analyzing several models with bifurcations and predicting the time periods when systems can still avoid going to a critical transition by manipulating certain parameter values, which is not detectable with the existing SA techniques. DyGloSA is based on the SBToolbox2 and contains functions, which compute dynamically the global sensitivity indices of the system by applying four main GPSA methods: eFAST, Sobol's ANOVA, PRCC and WALS. It includes parallelized versions of the functions enabling significant reduction of the computational time (up to 12 times). DyGloSA is freely available as a set of MATLAB scripts at It requires installation of MATLAB (versions R2008b or later) and the Systems Biology Toolbox2 available at DyGloSA can be run on Windows and Linux systems, -32 and -64 bits. PMID:24367574

  7. A synthetic eicosanoid LX-mimetic unravels host-donor interactions in allogeneic BMT-induced GvHD to reveal an early protective role for host neutrophils. (United States)

    Devchand, Pallavi R; Schmidt, Birgitta A; Primo, Valeria C; Zhang, Qing-yin; Arnaout, M Amin; Serhan, Charles N; Nikolic, Boris


    Lipoxin A(4) (LXA(4)) and aspirin-triggered 15-epi-LXA(4) are potent endogenous lipid mediators thought to define the inflammatory set-point. We used single prophylactic administrations of a synthetic aspirin-triggered lipoxin A(4) signal mimetic, ATLa, to probe dynamics of early host-donor interactions in a mouse model for the inflammation-associated multifactorial disease of allogeneic bone marrow transplant (BMT) -induced graft-vs.-host disease (GvHD). We first demonstrated that both host and donor are responsive to the ATLa signals. The simple and restricted regimen of a single prophylactic administration of ATLa [100 ng/mL to donor cells or 1 microg (approximately 50 microg/kg) i.v. to host] was sufficient to delay death. Clinical indicators of weight, skin lesions, diarrhea and eye inflammation were monitored. Histological analyses on day 45 post-BMT showed that the degree of cellular trafficking, particularly neutrophil infiltrate, and protection of end-organ target pathology are different, depending on whether the host or donor was treated with ATLa. Taken together, these results chart some ATLa protective effects on GvHD cellular dynamics over time and identify a previously unrecognized effect of host neutrophils in the early phase post-BMT as important determinants in the dynamics of GvHD onset and progression.-Devchand, P. R., Schmidt, B. A., Primo, V. C., Zhang, Q.-y., Arnaout, M. A., Serhan, C. N., Nikolic, B. A synthetic eicosanoid LX-mimetic unravels host-donor interactions in allogeneic BMT-induced GvHD to reveal an early protective role for host neutrophils.

  8. Switch of sensitivity dynamics revealed with DyGloSA toolbox for dynamical global sensitivity analysis as an early warning for system's critical transition. (United States)

    Baumuratova, Tatiana; Dobre, Simona; Bastogne, Thierry; Sauter, Thomas


    Systems with bifurcations may experience abrupt irreversible and often unwanted shifts in their performance, called critical transitions. For many systems like climate, economy, ecosystems it is highly desirable to identify indicators serving as early warnings of such regime shifts. Several statistical measures were recently proposed as early warnings of critical transitions including increased variance, autocorrelation and skewness of experimental or model-generated data. The lack of automatized tool for model-based prediction of critical transitions led to designing DyGloSA - a MATLAB toolbox for dynamical global parameter sensitivity analysis (GPSA) of ordinary differential equations models. We suggest that the switch in dynamics of parameter sensitivities revealed by our toolbox is an early warning that a system is approaching a critical transition. We illustrate the efficiency of our toolbox by analyzing several models with bifurcations and predicting the time periods when systems can still avoid going to a critical transition by manipulating certain parameter values, which is not detectable with the existing SA techniques. DyGloSA is based on the SBToolbox2 and contains functions, which compute dynamically the global sensitivity indices of the system by applying four main GPSA methods: eFAST, Sobol's ANOVA, PRCC and WALS. It includes parallelized versions of the functions enabling significant reduction of the computational time (up to 12 times). DyGloSA is freely available as a set of MATLAB scripts at It requires installation of MATLAB (versions R2008b or later) and the Systems Biology Toolbox2 available at DyGloSA can be run on Windows and Linux systems, -32 and -64 bits.

  9. Successful in vitro expansion and differentiation of cord blood derived CD34+ cells into early endothelial progenitor cells reveals highly differential gene expression.

    Directory of Open Access Journals (Sweden)

    Ingo Ahrens

    Full Text Available Endothelial progenitor cells (EPCs can be purified from peripheral blood, bone marrow or cord blood and are typically defined by a limited number of cell surface markers and a few functional tests. A detailed in vitro characterization is often restricted by the low cell numbers of circulating EPCs. Therefore in vitro culturing and expansion methods are applied, which allow at least distinguishing two different types of EPCs, early and late EPCs. Herein, we describe an in vitro culture technique with the aim to generate high numbers of phenotypically, functionally and genetically defined early EPCs from human cord blood. Characterization of EPCs was done by flow cytometry, immunofluorescence microscopy, colony forming unit (CFU assay and endothelial tube formation assay. There was an average 48-fold increase in EPC numbers. EPCs expressed VEGFR-2, CD144, CD18, and CD61, and were positive for acetylated LDL uptake and ulex lectin binding. The cells stimulated endothelial tube formation only in co-cultures with mature endothelial cells and formed CFUs. Microarray analysis revealed highly up-regulated genes, including LL-37 (CAMP, PDK4, and alpha-2-macroglobulin. In addition, genes known to be associated with cardioprotective (GDF15 or pro-angiogenic (galectin-3 properties were also significantly up-regulated after a 72 h differentiation period on fibronectin. We present a novel method that allows to generate high numbers of phenotypically, functionally and genetically characterized early EPCs. Furthermore, we identified several genes newly linked to EPC differentiation, among them LL-37 (CAMP was the most up-regulated gene.

  10. Gene expression analysis reveals early changes in several molecular pathways in cerebral malaria-susceptible mice versus cerebral malaria-resistant mice

    Directory of Open Access Journals (Sweden)

    Grau Georges E


    Full Text Available Abstract Background Microarray analyses allow the identification and assessment of molecular signatures in whole tissues undergoing pathological processes. To better understand cerebral malaria pathogenesis, we investigated intra-cerebral gene-expression profiles in well-defined genetically cerebral malaria-resistant (CM-R and CM-susceptible (CM-S mice, upon infection by Plasmodium berghei ANKA (PbA. We investigated mouse transcriptional responses at early and late stages of infection by use of cDNA microarrays. Results Through a rigorous statistical approach with multiple testing corrections, we showed that PbA significantly altered brain gene expression in CM-R (BALB/c, and in CM-S (CBA/J and C57BL/6 mice, and that 327 genes discriminated between early and late infection stages, between mouse strains, and between CM-R and CM-S mice. We further identified 104, 56, 84 genes with significant differential expression between CM-R and CM-S mice on days 2, 5, and 7 respectively. The analysis of their functional annotation indicates that genes involved in metabolic energy pathways, the inflammatory response, and the neuroprotection/neurotoxicity balance play a major role in cerebral malaria pathogenesis. In addition, our data suggest that cerebral malaria and Alzheimer's disease may share some common mechanisms of pathogenesis, as illustrated by the accumulation of β-amyloid proteins in brains of CM-S mice, but not of CM-R mice. Conclusion Our microarray analysis highlighted marked changes in several molecular pathways in CM-S compared to CM-R mice, particularly at early stages of infection. This study revealed some promising areas for exploration that may both provide new insight into the knowledge of CM pathogenesis and the development of novel therapeutic strategies.

  11. Stratigraphy of the late Cenozoic sediments beneath the 216-B and C crib facilities

    International Nuclear Information System (INIS)

    Fecht, K.R.; Last, G.V.; Marratt, M.C.


    The stratigraphy of the late Cenozoic sediments beneath the 216-B and C Crib Facilities is presented as lithofacies cross sections and is based on textural variations of the sedimentary sequence lying above the basalt bedrock. The primary source of data in this study is geologic information obtained from well drilling operations and geophysical logging. Stratigraphic interpretations are based primarily on textural analysis and visual examination of sediment samples and supplemented by drillers logs and geophysical logs

  12. Stratigraphy of the late Cenozoic sediments beneath the 216-A Crib Facilities

    International Nuclear Information System (INIS)

    Fecht, K.R.; Last, G.V.; Marratt, M.C.


    The stratigraphy of the late Cenozoic sediments beneath the 216-A Crib Facilities is presented as lithofacies cross sections and is based on textural variations of the sedimentary sequence lying above the basalt bedrock. The primary source of data in this study is geologic information obtained from well drilling operations and geophysical logging. Stratigraphic interpretations are based primarily on textural analysis and visual examination of sediment samples and supplemented by drillers logs and geophysical logs

  13. Cenozoic deposits exposed along Rio de la Plata coast in the Canelones Department (Uruguay)

    International Nuclear Information System (INIS)

    Goso Aguilar, C.; Spoturno, J.


    This paper allows to know some sedimentological and stratigraphical features of the Cenozoic deposits exposed along Rio de la Plata coast in the Canelones department, Uruguay. The results, mainly collected from metric thickness of local stratigraphical sections and coastal outcrops of that region are presented. Both Tertiary and Quaternary sediments are present, however transitional Pleistocenic deposits of Chuy Formation and continental sediments of Libertad Formation are more dominant [es

  14. Geochemistry and petrology of pyroxenite xenoliths from Cenozoic alkaline basalts, Bohemian Massif

    Czech Academy of Sciences Publication Activity Database

    Ackerman, Lukáš; Špaček, Petr; Medaris Jr., G.; Hegner, E.; Svojtka, Martin; Ulrych, Jaromír


    Roč. 57, č. 4 (2012), s. 199-219 ISSN 1802-6222 R&D Projects: GA ČR(CZ) GA205/09/1170 Institutional research plan: CEZ:AV0Z30130516; CEZ:AV0Z30120515 Institutional support: RVO:67985831 ; RVO:67985530 Keywords : pyroxenite * xenolith * Cenozoic * basalt * Sr-Nd isotopes * geothermobarometry Subject RIV: DD - Geochemistry Impact factor: 0.804, year: 2012

  15. Distribution of Cenozoic plant relicts in China explained by drought in dry season. (United States)

    Huang, Yongjiang; Jacques, Frédéric M B; Su, Tao; Ferguson, David K; Tang, Hui; Chen, Wenyun; Zhou, Zhekun


    Cenozoic plant relicts are those groups that were once widespread in the Northern Hemisphere but are now restricted to some small isolated areas as a result of drastic climatic changes. They are good proxies to study how plants respond to climatic changes since their modern climatic requirements are known. Herein we look at the modern distribution of 65 palaeoendemic genera in China and compare it with the Chinese climatic pattern, in order to find a link between the plant distribution and climate. Central China and Taiwan Island are shown to be diversity centres of Cenozoic relict genera, consistent with the fact that these two regions have a shorter dry season with comparatively humid autumn and spring in China. Species distribution models indicate that the precipitation parameters are the most important variables to explain the distribution of relict genera. The Cenozoic wide-scale distribution of relict plants in the Northern Hemisphere is therefore considered to be linked to the widespread humid climate at that time, and the subsequent contraction of their distributional ranges was probably caused by the drying trend along with global cooling.

  16. Construction of the seawater 87Sr/86Sr curve for the Cenozoic and Cretaceous: supporting data

    International Nuclear Information System (INIS)

    Koepnick, R.B.; Burke, W.H.; Denison, R.E.; Hetherington, E.A.; Nelson, H.F.; Otto, J.B.; Waite, L.E.


    We present the data used to construct the Cenozoic and Cretaceous portion of the Phanerozoic curve of seawater 87 Sr/ 86 Sr that had been given in summary form by W.H. Burke and coworkers. All Cenozoic samples (128) and 22 Cretaceous samples are foram-nannofossil oozes and limestones from DSDP cores distributed among 13 sites in the Atlantic, Pacific and Indian Oceans, and the Caribbean Sea. Non-DSDP Cretaceous samples (126) include limestone, anhydrite and phosphate samples from North America, Europe and Asia. Determination of the 87 Sr/ 86 Sr value of seawater at particular times in the past is based on comparison of ratios derived from coeval marine samples from widely separated geographic areas. The general configuration of the Cenozoic and Cretaceous curve appears to be strongly influenced by the history of plate interactions and sea-floor spreading. Specific rises and falls in the 87 Sr/ 86 Sr of seawater, however, may be caused by a variety of factors such as variation in lithologic composition of the crust exposed to weathering, configuration and topographic relief of continents, volcanic activity, rate of sea-floor spreading, extent of continental inundation by epeiric seas, and variations in both climate and paleo-oceanographic conditions. Many or all of these factors are probably related to global tectonic processes, yet their combined effect on the temporal variation of seawater 87 Sr/ 86 Sr can complicate a direct plate-tectonic interpretation for portions of the seawater curve. (Auth.)

  17. Late Cenozoic Arctic Ocean sea ice and terrestrial paleoclimate. (United States)

    Carter, L.D.; Brigham-Grette, J.; Marincovich, L.; Pease, V.L.; Hillhouse, J.W.


    Sea otter remains found in deposits of two marine transgressions (Bigbendian and Fishcreekian) of the Alaskan Arctic Coastal Plain which occurred between 2.4 and 3 Ma suggest that during these two events the southern limit of seasonal sea ice was at least 1600 km farther north than at present in Alaskan waters. Perennial sea ice must have been severely restricted or absent, and winters were warmer than at present during these two sea-level highstands. Paleomagnetic, faunal, and palynological data indicate that the later transgression (Fishcreekian) occurred during the early part of the Matuyama Reversed-Polarity Chron. -from Authors

  18. Origins of the Asian-Australian monsoons related to Cenozoic plate movement and Tibetan Plateau uplift - A modeling study (United States)

    Liu, X.; Dong, B.; Yin, Z. Y.; Smith, R. S.; Guo, Q.


    The origin of monsoon is a subject that has attracted much attention in the scientific community and even today it is still controversial. According to geological records, there is conflicting evidence regarding the timings of establishment of the monsoon climates in South Asia, East Asia, and northern Australia. Additionally, different explanations for the monsoon origins have been derived from various numerical simulations. To further investigate the origin and evolution of the Asian and Australian monsoons, we designed a series of numerical experiments using a coupled atmospheric-oceanic general circulation model. Since the Indian-Australian plate has shifted its position significantly during the Cenozoic, together with the large-scale uplift of the Tibetan Plateau (TP), in these experiments we considered the configurations of ocean-land masses and large topographic features based on geological evidence of plate motion and TP uplift in 5 typical Cenozoic geological periods: mid-Paleocene ( 60Ma), late-Eocene ( 40Ma), late-Oligocene ( 25Ma), late-Miocene ( 10Ma), and present day. These experiments allowed us to examine the combined effects of the changes in the land-ocean configuration due to plate movement and TP uplift, they also provided insight into the effects of the high CO2 levels during the Eocene. The simulations revealed that during the Paleocene, the Indian Subcontinent was still positioned in the Southern Hemisphere (SH) and, therefore, its climate behaved as the SH tropical monsoon. By the late Eocene, it moved into the tropical Northern Hemisphere, which allowed the establishment of the South Asian monsoon. In contrast, the East Asian and Australian monsoon did not exist in the late Oligocene. These monsoon systems were established in the Miocene and then enhanced thereafter. Establishments of the low-latitude monsoons in South Asia and Australia were entirely determined by the position of the Indian-Australian plate and not related to the TP uplift

  19. The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record. (United States)

    Hsiang, Allison Y; Field, Daniel J; Webster, Timothy H; Behlke, Adam D B; Davis, Matthew B; Racicot, Rachel A; Gauthier, Jacques A


    The highly derived morphology and astounding diversity of snakes has long inspired debate regarding the ecological and evolutionary origin of both the snake total-group (Pan-Serpentes) and crown snakes (Serpentes). Although speculation abounds on the ecology, behavior, and provenance of the earliest snakes, a rigorous, clade-wide analysis of snake origins has yet to be attempted, in part due to a dearth of adequate paleontological data on early stem snakes. Here, we present the first comprehensive analytical reconstruction of the ancestor of crown snakes and the ancestor of the snake total-group, as inferred using multiple methods of ancestral state reconstruction. We use a combined-data approach that includes new information from the fossil record on extinct crown snakes, new data on the anatomy of the stem snakes Najash rionegrina, Dinilysia patagonica, and Coniophis precedens, and a deeper understanding of the distribution of phenotypic apomorphies among the major clades of fossil and Recent snakes. Additionally, we infer time-calibrated phylogenies using both new 'tip-dating' and traditional node-based approaches, providing new insights on temporal patterns in the early evolutionary history of snakes. Comprehensive ancestral state reconstructions reveal that both the ancestor of crown snakes and the ancestor of total-group snakes were nocturnal, widely foraging, non-constricting stealth hunters. They likely consumed soft-bodied vertebrate and invertebrate prey that was subequal to head size, and occupied terrestrial settings in warm, well-watered, and well-vegetated environments. The snake total-group - approximated by the Coniophis node - is inferred to have originated on land during the middle Early Cretaceous (~128.5 Ma), with the crown-group following about 20 million years later, during the Albian stage. Our inferred divergence dates provide strong evidence for a major radiation of henophidian snake diversity in the wake of the Cretaceous-Paleogene (K

  20. Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos (United States)

    Wang, Xinyi; Liu, Denghui; He, Dajian; Suo, Shengbao; Xia, Xian; He, Xiechao; Han, Jing-Dong J.; Zheng, Ping


    Preimplantation embryogenesis encompasses several critical events including genome reprogramming, zygotic genome activation (ZGA), and cell-fate commitment. The molecular basis of these processes remains obscure in primates in which there is a high rate of embryo wastage. Thus, understanding the factors involved in genome reprogramming and ZGA might help reproductive success during this susceptible period of early development and generate induced pluripotent stem cells with greater efficiency. Moreover, explaining the molecular basis responsible for embryo wastage in primates will greatly expand our knowledge of species evolution. By using RNA-seq in single and pooled oocytes and embryos, we defined the transcriptome throughout preimplantation development in rhesus monkey. In comparison to archival human and mouse data, we found that the transcriptome dynamics of monkey oocytes and embryos were very similar to those of human but very different from those of mouse. We identified several classes of maternal and zygotic genes, whose expression peaks were highly correlated with the time frames of genome reprogramming, ZGA, and cell-fate commitment, respectively. Importantly, comparison of the ZGA-related network modules among the three species revealed less robust surveillance of genomic instability in primate oocytes and embryos than in rodents, particularly in the pathways of DNA damage signaling and homology-directed DNA double-strand break repair. This study highlights the utility of monkey models to better understand the molecular basis for genome reprogramming, ZGA, and genomic stability surveillance in human early embryogenesis and may provide insights for improved homologous recombination-mediated gene editing in monkey. PMID:28223401

  1. Early Eocene climatic optimum: Environmental impact on the North Iberian continental margin

    NARCIS (Netherlands)

    Payros, A.; Ortiz, S.; Millán, I.; Arostegi, J.; Orue-Etxebarria, X.; Apellaniz, E.


    The early Eocene climatic optimum, which constituted the peak of the long-term early Cenozoic global warming, had a significant impact on the environmental evolution of terrestrial and oceanic areas. Surprisingly, however, its influence on continental margins is poorly known. New insights are

  2. Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life. (United States)

    Xiong, Weili; Brown, Christopher T; Morowitz, Michael J; Banfield, Jillian F; Hettich, Robert L


    ) utilization and short-chain fatty acid production. Overall, this study reports species-specific proteome profiles and metabolic functions of human gut microbiota during early colonization. In particular, our work contributes to reveal microbiota-associated shifts and variations in the metabolism of three major nutrient sources and short-chain fatty acid during colonization of preterm infant gut.

  3. Spontaneous Recovery from Unresponsive Wakefulness Syndrome to a Minimally Conscious State: Early Structural Changes Revealed by 7-T Magnetic Resonance Imaging

    Directory of Open Access Journals (Sweden)

    Xufei Tan


    Full Text Available BackgroundDetermining the early changes of brain structure that occur from vegetative state/unresponsive wakefulness syndrome (VS/UWS to a minimally conscious state (MCS is important for developing our understanding of the processes underlying disorders of consciousness (DOC, particularly during spontaneous recovery from severe brain damage.ObjectiveThis study used a multi-modal neuroimaging approach to investigate early structural changes during spontaneous recovery from VS/UWS to MCS.MethodsThe Coma Recovery Scale-Revised (CRS-R score, 24-h electroencephalography (EEG, and ultra-high field 7-T magnetic resonance imaging were used to investigate a male patient with severe brain injury when he was in VS/UWS compared to MCS. Using white matter connectometry analysis, fibers in MCS were compared with the same fibers in VS/UWS. Whole-brain analysis was used to compare all fibers showing a 10% increase in density with each other as a population.ResultsBased on connectometry analysis, the number of fibers with increased density, and the magnitude of increase in MCS compared to VS/UWS, was greatest in the area of the temporoparietal junction (TPJ, and was mostly located in the right hemisphere. These results are in accordance with the active areas observed on 24-h EEG recordings. Moreover, analysis of different fibers across the brain, showing at least a 10% increase in density, revealed that altered white matter connections with higher discriminative weights were located within or across visual-related areas, including the cuneus_R, calcarine_R, occipital_sup_R, and occipital_mid_R. Furthermore, the temporal_mid_R, which is related to the auditory cortex, showed the highest increase in connectivity to other areas. This was consistent with improvements in the visual and auditory components of the CRS-R, which were greater than other improvements.ConclusionThese results provide evidence to support the important roles for the TPJ and the visual and

  4. Mesozoic-Cenozoic tectonic evolution and its relation to sandstone-type uranium mineralization in northern Tarim area--Evidence from apatite fission track

    International Nuclear Information System (INIS)

    Liu Hongxu; Dong Wenming; Liu Zhangyue; Chen Xiaolin


    The apatite fission track dating and inversion result of geological thermal history of four rock specimens from Sawafuqi area and Talike area in northern Tarim Basin show that two areas uplifted at different ages. The apatite fission track ages of Sawafuqi range from 3.5 to 3.9 Ma, while the ages of Talike range from 53 to 59 Ma. The thermal history recorded by rock samples reveals that there are at least three prominent cooling phases since Late Cretaceous epoch. Detailed study was made on the division of uplifting stages during Mesozoic and Cenozoic tectonic evolution with the existing data in northern Tarim area. And new ideas on tectonic evolution and sandstone-type uranium mineralization have been put forward by combining with the sandstone-type uranium mineralization ages in this area.(authors)

  5. Did the Bering Sea Form as a Cenozoic Backarc Basin? (United States)

    Stern, R. J.; Barth, G. A.; Scheirer, D. S.; Scholl, D. W.


    Understanding the origins of Bering Sea marginal basins (Aleutian, Bowers, and Komandorsky basins; AB, BB, KB) is key for reconstructing N. Pacific tectonic and magmatic evolution. New acquisitions and recompilations of MCS, OBS, and potential field data (Barth et al. poster. this session) for USGS Extended Continental Shelf project and selection of Aleutians as GeoPrisms Subduction Cycles and Deformation focus site stimulate reconsideration of BB, KB, and especially AB origins. AB has long been regarded as N. Pacific crust trapped when the Aleutian subduction began ~45-50 Ma. BB and KB probably formed together as Miocene backarc basins. Presence of Oligo-Miocene arc volcanics on Bowers and Shirshov ridges suggests that these are remnant arcs, orphaned by AB and KB opening. Seven lines of evidence suggest that AB formed as a Paleogene backarc basin: 1) AB heatflow suggests an age of about 44 Ma (Langseth et al 1980 JGR). 2) Formation of NNW-trending rift basins on Bering shelf (Navarin, Pribilof, and St. George basins) in Paleogene time indicate extension at this time. 3) The early Paleogene "red unconformity" of the Beringian margin could indicate uplift, erosion, and subsidence associated with AB opening. 4) ~N-S magnetic anomalies in AB contrasts with E-W Kula anomalies on N. Pacific, indicating that the two tracts of oceanic crust formed at different spreading ridges. 5) Thicker sediment in AB (2-4 km) vs. BB and KB (oceanic crust.ectonic scenario for formation of Aleutian Arc and Bering Sea basins. Green = present land; yellow = shelf; AB = Aleutian Basin; KB = Komandorsky Basin; BB = Bowers Basin; SR = Shirshov Ridge, BR = Bowers Ridge; Red = active volcanism and spreading ; Blue = extinct volcanism and spreading

  6. Proteomic analysis of stipe explants reveals differentially expressed proteins involved in early direct somatic embryogenesis of the tree fern Cyathea delgadii Sternb. (United States)

    Domżalska, Lucyna; Kędracka-Krok, Sylwia; Jankowska, Urszula; Grzyb, Małgorzata; Sobczak, Mirosław; Rybczyński, Jan J; Mikuła, Anna


    Using cyto-morphological analysis of somatic embryogenesis (SE) in the tree fern Cyathea delgadii as a guide, we performed a comparative proteomic analysis in stipe explants undergoing direct SE. Plant material was cultured on hormone-free medium supplemented with 2% sucrose. Phenol extracted proteins were separated using two-dimensional gel electrophoresis (2-DE) and mass spectrometry was performed for protein identification. A total number of 114 differentially regulated proteins was identified during early SE, i.e. when the first cell divisions started and several-cell pro-embryos were formed. Proteins were assigned to seven functional categories: carbohydrate metabolism, protein metabolism, cell organization, defense and stress responses, amino acid metabolism, purine metabolism, and fatty acid metabolism. Carbohydrate and protein metabolism were found to be the most sensitive SE functions with the greatest number of alterations in the intensity of spots in gel. Differences, especially in non-enzymatic and structural protein abundance, are indicative for cell organization, including cytoskeleton rearrangement and changes in cell wall components. The highest induced changes concern those enzymes related to fatty acid metabolism. Global analysis of the proteome reveals several proteins that can represent markers for the first 16days of SE induction and expression in fern. The findings of this research improve the understanding of molecular processes involved in direct SE in C. delgadii. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. Paleoarchean bedrock lithologies across the Makhonjwa Mountains of South Africa and Swaziland linked to geochemical, magnetic and tectonic data reveal early plate tectonic genes flanking subduction margins

    Directory of Open Access Journals (Sweden)

    Maarten de Wit


    Full Text Available The Makhonjwa Mountains, traditionally referred to as the Barberton Greenstone Belt, retain an iconic Paleoarchean archive against which numerical models of early earth geodynamics can be tested. We present new geologic and structural maps, geochemical plots, geo- and thermo-chronology, and geophysical data from seven silicic, mafic to ultramafic complexes separated by major shear systems across the southern Makhonjwa Mountains. All reveal signs of modern oceanic back-arc crust and subduction-related processes. We compare the rates of processes determined from this data and balance these against plate tectonic and plume related models. Robust rates of both horizontal and vertical tectonic processes derived from the Makhonjwa Mountain complexes are similar, well within an order of magnitude, to those encountered across modern oceanic and orogenic terrains flanking Western Pacific-like subduction zones. We conclude that plate tectonics and linked plate-boundary processes were well established by 3.2–3.6 Ga. Our work provides new constraints for modellers with rates of a ‘basket’ of processes against which to test Paleoarchean geodynamic models over a time period close to the length of the Phanerozoic. Keywords: Paleoarchean, Barberton Greenstone Belt, Onverwacht Suite, Geologic bedrock and structural maps, Geochemistry and geophysics, Plate tectonics

  8. Review of the upper Cenozoic stratigraphy overlying the Columbia River Basalt Group in western Idaho

    International Nuclear Information System (INIS)

    Strowd, W.B.


    This report is a synthesis of information currently available on the rocks that stratigraphically overlie the Columbia River Basalt Group in Idaho. The primary objective is to furnish a brief but comprehensive review of the literature available on upper Cenozoic rocks in western Idaho and to discuss their general stratigraphic relationships. This study also reviews the derivation of the present stratigraphy and notes weaknesses in our present understanding of the geology and the stratigraphy. This report was prepared in support of a study to evaluate the feasibility of nuclear waste storage in the Columbia River Basalt Group of the Pasco Basin, Washington

  9. Discussion on geological characteristics and types of uranium deposit of Mesozoic-cenozoic basin in Guangdong

    International Nuclear Information System (INIS)

    Wang Kesheng; Deng Shihua


    Systematic summary is briefly made of the distribution, classification, formation, regional geological setting, uranium deposit type, ore-controlling geological conditions of the Mesozoic-Cenozoic basin in Guangdong area, and on this basis it is proposed that there exist different ore-controlling conditions in different types of basin and different types of deposit can be formed in them, thus indicating the direction for exploration of the basin type uranium deposit from now on and expanding the prospect of ore-finding in the basins in Guangdong area

  10. New Eocene damselflies and first Cenozoic damsel-dragonfly of the isophlebiopteran lineage (Insecta: Odonata). (United States)

    Garrouste, Romain; Nel, André


    The study of a new specimen of Petrolestes hendersoni from the Eocene Green Formation allows a more precise description of the enigmatic damselfly and the diagnosis of the Petrolestini. Petrolestes messelensis sp. nov. is described from the Eocene Messel Formation in Germany, extending the distribution of the Petrolestini to the European Eocene. The new damsel-dragonfly family Pseudostenolestidae is described for the new genus and species Pseudostenolestes bechlyi, from the Eocene Messel Formation. It is the first Cenozoic representative of the Mesozoic clade Isophlebioptera.

  11. Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution. (United States)

    Miller, Phillip W; Pokutta, Sabine; Mitchell, Jennyfer M; Chodaparambil, Jayanth V; Clarke, D Nathaniel; Nelson, William; Weis, William I; Nichols, Scott A


    The evolution of cell adhesion mechanisms in animals facilitated the assembly of organized multicellular tissues. Studies in traditional animal models have revealed two predominant adhesion structures, the adherens junction (AJ) and focal adhesions (FAs), which are involved in the attachment of neighboring cells to each other and to the secreted extracellular matrix (ECM), respectively. The AJ (containing cadherins and catenins) and FAs (comprising integrins, talin, and paxillin) differ in protein composition, but both junctions contain the actin-binding protein vinculin. The near ubiquity of these structures in animals suggests that AJ and FAs evolved early, possibly coincident with multicellularity. However, a challenge to this perspective is that previous studies of sponges-a divergent animal lineage-indicate that their tissues are organized primarily by an alternative, sponge-specific cell adhesion mechanism called "aggregation factor." In this study, we examined the structure, biochemical properties, and tissue localization of a vinculin ortholog in the sponge Oscarella pearsei ( Op ). Our results indicate that Op vinculin localizes to both cell-cell and cell-ECM contacts and has biochemical and structural properties similar to those of vertebrate vinculin. We propose that Op vinculin played a role in cell adhesion and tissue organization in the last common ancestor of sponges and other animals. These findings provide compelling evidence that sponge tissues are indeed organized like epithelia in other animals and support the notion that AJ- and FA-like structures extend to the earliest periods of animal evolution. Published under license by The American Society for Biochemistry and Molecular Biology, Inc.

  12. Effect of Warfarin Treatment on Survival of Patients With Pulmonary Arterial Hypertension (PAH) in the Registry to Evaluate Early and Long-Term PAH Disease Management (REVEAL). (United States)

    Preston, Ioana R; Roberts, Kari E; Miller, Dave P; Sen, Ginny P; Selej, Mona; Benton, Wade W; Hill, Nicholas S; Farber, Harrison W


    Long-term anticoagulation is recommended in idiopathic pulmonary arterial hypertension (IPAH). In contrast, limited data support anticoagulation in pulmonary arterial hypertension (PAH) associated with systemic sclerosis (SSc-PAH). We assessed the effect of warfarin anticoagulation on survival in IPAH and SSc-PAH patients enrolled in Registry to Evaluate Early and Long-term PAH Disease Management (REVEAL), a longitudinal registry of group I PAH. Patients who initiated warfarin on study (n=187) were matched 1:1 with patients never on warfarin, by enrollment site, etiology, and diagnosis status. Descriptive analyses were conducted to compare warfarin users and nonusers by etiology. Survival analyses with and without risk adjustment were performed from the time of warfarin initiation or a corresponding quarterly update in matched pairs to avoid immortal time bias. Time-varying covariate models were used as sensitivity analyses. Mean warfarin treatment was 1 year; mean international normalized ratios were 1.9 (IPAH) and 2.0 (SSc-PAH). Two-thirds of patients initiating warfarin discontinued treatment before the last study assessment. There was no survival difference with warfarin in IPAH patients (adjusted hazard ratio, 1.37; P=0.21) or in SSc-PAH patients (adjusted hazard ratio, 1.60; P=0.15) in comparison with matched controls. However, SSc-PAH patients receiving warfarin within the previous year (hazard ratio, 1.57; P=0.031) or any time postbaseline (hazard ratio, 1.49; P=0.046) had increased mortality in comparison with warfarin-naïve patients. No significant survival advantage was observed in IPAH patients who started warfarin. In SSc-PAH patients, long-term warfarin was associated with poorer survival than in patients not receiving warfarin, even after adjusting for confounders. URL: Unique identifier: NCT00370214. © 2015 The Authors.

  13. Mass Cytometry Analysis Reveals the Landscape and Dynamics of CD32a+ CD4+ T Cells From Early HIV Infection to Effective cART. (United States)

    Coindre, Sixtine; Tchitchek, Nicolas; Alaoui, Lamine; Vaslin, Bruno; Bourgeois, Christine; Goujard, Cecile; Avettand-Fenoel, Veronique; Lecuroux, Camille; Bruhns, Pierre; Le Grand, Roger; Beignon, Anne-Sophie; Lambotte, Olivier; Favier, Benoit


    CD32a has been proposed as a specific marker of latently HIV-infected CD4 + T cells. However, CD32a was recently found to be expressed on CD4 + T cells of healthy donors, leading to controversy on the relevance of this marker in HIV persistence. Here, we used mass cytometry to characterize the landscape and variation in the abundance of CD32a + CD4 + T cells during HIV infection. To this end, we analyzed CD32a + CD4 + T cells in primary HIV infection before and after effective combination antiretroviral therapy (cART) and in healthy donors. We found that CD32a + CD4 + T cells include heterogeneous subsets that are differentially affected by HIV infection. Our analysis revealed that naive ( N ), central memory ( CM ), and effector/memory ( Eff/Mem ) CD32a + CD4 + T-cell clusters that co-express LILRA2- and CD64-activating receptors were more abundant in primary HIV infection and cART stages. Conversely, LILRA2 - CD32a + CD4 + T-cell clusters of either the T N , T CM , or T Eff/Mem phenotype were more abundant in healthy individuals. Finally, an activated CD32a + CD4 + T Eff/Mem cell cluster co-expressing LILRA2, CD57, and NKG2C was more abundant in all HIV stages, particularly during primary HIV infection. Overall, our data show that multiple abundance modifications of CD32a + CD4 + T-cell subsets occur in the early phase of HIV infection, and some of which are conserved after effective cART. Our study brings a better comprehension of the relationship between CD32a expression and CD4 + T cells during HIV infection.

  14. Mass Cytometry Analysis Reveals the Landscape and Dynamics of CD32a+ CD4+ T Cells From Early HIV Infection to Effective cART

    Directory of Open Access Journals (Sweden)

    Sixtine Coindre


    Full Text Available CD32a has been proposed as a specific marker of latently HIV-infected CD4+ T cells. However, CD32a was recently found to be expressed on CD4+ T cells of healthy donors, leading to controversy on the relevance of this marker in HIV persistence. Here, we used mass cytometry to characterize the landscape and variation in the abundance of CD32a+ CD4+ T cells during HIV infection. To this end, we analyzed CD32a+ CD4+ T cells in primary HIV infection before and after effective combination antiretroviral therapy (cART and in healthy donors. We found that CD32a+ CD4+ T cells include heterogeneous subsets that are differentially affected by HIV infection. Our analysis revealed that naive (N, central memory (CM, and effector/memory (Eff/Mem CD32a+ CD4+ T-cell clusters that co-express LILRA2- and CD64-activating receptors were more abundant in primary HIV infection and cART stages. Conversely, LILRA2− CD32a+ CD4+ T-cell clusters of either the TN, TCM, or TEff/Mem phenotype were more abundant in healthy individuals. Finally, an activated CD32a+ CD4+ TEff/Mem cell cluster co-expressing LILRA2, CD57, and NKG2C was more abundant in all HIV stages, particularly during primary HIV infection. Overall, our data show that multiple abundance modifications of CD32a+ CD4+ T-cell subsets occur in the early phase of HIV infection, and some of which are conserved after effective cART. Our study brings a better comprehension of the relationship between CD32a expression and CD4+ T cells during HIV infection.

  15. Unusual ruby-sapphire transition in alluvial megacrysts, Cenozoic basaltic gem field, New England, New South Wales, Australia (United States)

    Sutherland, Frederick L.; Graham, Ian T.; Harris, Stephen J.; Coldham, Terry; Powell, William; Belousova, Elena A.; Martin, Laure


    Rare ruby crystals appear among prevailing sapphire crystals mined from placers within basaltic areas in the New England gem-field, New South Wales, Australia. New England ruby (NER) has distinctive trace element features compared to those from ruby elsewhere in Australia and indeed most ruby from across the world. The NER suite includes ruby (up to 3370 ppm Cr), pink sapphire (up to 1520 ppm Cr), white sapphire (up to 910 ppm) and violet, mauve, purple, or bluish sapphire (up to 1410 ppm Cr). Some crystals show outward growth banding in this respective colour sequence. All four colour zones are notably high in Ga (up to 310 ppm) and Si (up to 1820 ppm). High Ga and Ga/Mg values are unusual in ruby and its trace element plots (laser ablation-inductively coupled plasma-mass spectrometry) and suggests that magmatic-metasomatic inputs were involved in the NER suite genesis. In situ oxygen isotope analyses (secondary ion mass spectrometry) across the NER suite colour range showed little variation (n = 22; δ18O = 4.4 ± 0.4, 2σ error), and are values typical for corundum associated with ultramafic/mafic rocks. The isolated NER xenocryst suite, corroded by basalt transport and with few internal inclusions, presents a challenge in deciphering its exact origin. Detailed consideration of its high Ga chemistry in relation to the known geology of the surrounding region was used to narrow down potential sources. These include Late Palaeozoic-Triassic fractionated I-type granitoid magmas or Mesozoic-Cenozoic felsic fractionates from basaltic magmas that interacted with early Palaeozoic Cr-bearing ophiolite bodies in the New England Orogen. Other potential sources may lie deeper within lower crust-mantle metamorphic assemblages, but need to match the anomalous high-Ga geochemistry of the New England ruby suite.

  16. Paleomagnetic constraints on the Cenozoic kinematic evolution of the Pamir plateau from the Western Kunlun Shan foreland (United States)

    Li, Zhenyu; Ding, Lin; Lippert, Peter C.; Wei, Honghong


    Thick Cenozoic marine and terrestrial sediments are widely distributed along the perimeter of the Pamir plateau and provide valuable information on the kinematic evolution of the region. Here, we report new biostratigraphic and paleomagnetic results from the piedmont of the Western Kunlun Shan to constrain the magnitude and timing of vertical-axis rotations along the eastern margin of the Pamir. Sampling sites were selected by rock formations and ages, which are based on previous field mapping and on litholostratigraphic and biostratigraphic work presented here. Thermomagnetic analysis, step-wise thermal demagnetization behavior, and positive field tests all suggest that the characteristic remanent magnetization (ChRM) directions most probably have a primary detrital and chemical origin. Our results indicate variable, minor, but in some intervals significant vertical axis rotations with respect to a stable Asian reference frame. This pattern of rotations is similar to paleomagnetic data reported in previously published studies from the Eastern Pamir foreland. In contrast, published paleomagnetic data from the Western Pamir foreland consistently indicate significant CCW rotations within that region. Collectively, these results challenge simple oroclinal bending models for the origin of the Pamir salient, and instead are more consistent with an asymmetric "half-orocline" kinematic model in which the curvature of the Western Pamir is the product of a combination of lithospheric bending of an originally quasi-linear mountain belt and radial thrusting, and the subdued curvature of the eastern edge of the plateau is the result of lateral translation of the Pamir plateau northward past Tibet and Tarim along the Kashgar-Yecheng transfer system. Our results are consistent with activity on the Kashgar-Yecheng transfer system in the Early Miocene.

  17. Cenozoic Deformation of the Tarim Basin (Xinjiang, China): a Record of the Deformation Propagation through the Asian Orogenic System (United States)

    Laborde, A.; Barrier, L.; Simoes, M.; Li, H.


    During the Cenozoic, the ongoing India-Eurasia collision resulted in the formation of the Himalayan-Tibetan plateau and reactivated the Tian Shan and Altai ranges located thousands of kilometers further north. Despite numerous studies carried out on the geology and tectonics of this large convergent orogenic system, several mechanisms remain controversial such as the stress propagation through the Asia Continent or the strain partitioning between crustal thickening and lateral extruding of its lithosphere. Located between the Tibetan Plateau and the Tian Shan Range, the Tarim Basin and its several kilometres thick Cenozoic sediments derived from the surrounding mountain belts are key recorders to reconstruct the evolution of the latters. Moreover, this basin is often considered as a relatively rigid block, which behaved as a secondary ``indenter'' transmitting collisional stresses to the Tian Shan. However, due to the size of the Tarim and its thick Cenozoic sedimentary series hiding most of its structures, the constraints on the spatial distribution and timing of the its Cenozoic deformation remain fragmentary. Therefore, the main objective of our study was to produce a synthetic view of this deformation at the scale of the whole basin. Based on numerous surface and subsurface data (satellite images, field surveys, seismic profiles, and well data), we established a tectonic map of the Cenozoic structures in the region and built balanced geological cross-sections across the basin. Our surface and subsurface observations confirm that, contrary to what had been proposed, the Tarim block has also undergone a major deformation during the Cenozoic. The quantification and history of this deformation provide useful insights into the modalities of the crustal shortening in the area and the problems of stress propagation and strain partitioning following the Indo-Asian collision.

  18. Seismic facies and stratigraphy of the Cenozoic succession in McMurdo Sound, Antarctica: Implications for tectonic, climatic and glacial history (United States)

    Fielding, C.R.; Whittaker, J.; Henrys, S.A.; Wilson, T.J.; Nash, T.R.


    A new stratigraphic model is presented for the evolution of the Cenozoic Victoria Land Basin of the West Antarctic Rift, based on integration of seismic reflection and drilling data. The Early Rift phase (?latest Eocene to Early Oligocene) comprises wedges of strata confined by early extensional faults, and which contain seismic facies consistent with drainage via coarse-grained fans and deltas into discrete, actively subsiding grabens and half-grabens. The Main Rift phase (Early Oligocene to Early Miocene) comprises a lens of strata that thickens symmetrically from the basin margins into a central depocenter, and in which stratal events pass continuously over the top of the Early Rift extensional topography. Internal seismic facies and lithofacies indicate a more organized, cyclical shallow marine succession, influenced increasingly upward by cycles of glacial advance and retreat into the basin. The Passive Thermal Subsidence phase (Early Miocene to ?) comprises an evenly distributed sheet of strata that does not thicken appreciably into the depocentre, with more evidence for clinoform sets and large channels. These patterns are interpreted to record accumulation under similar environmental conditions but in a regime of slower subsidence. The Renewed Rifting phase (? to Recent, largely unsampled by coring thus far) has been further divided into 1, a lower interval, in which the section thickens passively towards a central depocentre, and 2. an upper interval, in which more dramatic thickening patterns are complicated by magmatic activity. The youngest part of the stratigraphy was accumulated under the influence of flexural loading imposed by the construction of large volcanic edifices, and involved minimal sediment supply from the western basin margin, suggesting a change in environmental (glacial) conditions at possibly c. 2 Ma.


    Directory of Open Access Journals (Sweden)



    Full Text Available In the past three decades numerous researches have been published containing maps describing basement morphology. The first basement interpretations were based on the correlation of borehole data, then in the ’80s further seismic surveys offered the possibility to refine the outcomes. We collected and compared these data – by following a geoinformatical approach - and integrated them during the preparation stage of the measurement obtained in the 2012 field trip of Eötvös Loránd University, Department of Geophysics and Space Science. By summing up all the data we are able to create a more accurate Pre-Cenozioc basemap of the studied area. The map covers approx. 300 km2 area in the west of Hungary, between the national border and Szombathely, in the eastern foreground of Vas-hegy. We compared five basemaps (KILENYI & RUMPLER 1984, FLÜGEL 1988, KILÉNYI & ŠEFARA 1989, DANK & FÜLÖP 1990, HASS et al. 2010, two magnetic (HOFFER 1960, FANCSIK et al. 2006, a Bouguer-anomaly map (FANCSIK et al. 2005 and torsion balance anomaly map (VAJK 1938. Apparently, by this comparison we can see that the depth of Pre-Cenozoic basement is interpreted in different ways in each article. In contradictory and information deficient areas an attempt was made to produce supplement data with seismic and magnetic measurements. Eventually, a refined Pre-Cenozoic basemap of the area has been created with the help of our complementing measurements, the old maps and more than twenty boreholes reaching basement. Our results revealed an eastern foothill buried under the surface, although the saddle morphology is unlikely. The model contains a basement with fairly steady slope based on industrial sesmic surveys, our results doubt its hole-like feature.

  20. Late Cenozoic thrusting of major faults along the central segment of Longmen Shan, eastern Tibet: Evidence from low-temperature thermochronology (United States)

    Tan, Xi-Bin; Xu, Xi-Wei; Lee, Yuan-Hsi; Lu, Ren-Qi; Liu, Yiduo; Xu, Chong; Li, Kang; Yu, Gui-Hua; Kang, Wen-Jun


    The Cenozoic orogenic process of the Longmen Shan (LMS) and the kinematics of major faults along the LMS are crucial for understanding the growth history and mechanism of the eastern Tibetan Plateau. Three major faults, from west to east, are present in the central segment of the LMS: the Wenchuan-Maoxian Fault (WMF), the Beichuan-Yingxiu Fault (BYF), and the Jiangyou-Guanxian Fault (JGF). Previous researchers have placed great impetus on the Pengguan Massif, between the WMF and BYF. However, limited low-temperature thermochronology data coverage in other areas prevents us from fully delineating the tectonic history of the LMS. In this study, we collect 22 samples from vertical profiles in the Xuelongbao Massif and the range frontal area located at the hanging walls of the WMF and JGF respectively, and conduct apatite and zircon fission track analyses. New fission track data reveal that the Xuelongbao Massif has been undergoing rapid exhumation with an average rate of 0.7-0.9 mm/yr since 11 Ma, and the range frontal area began rapid exhumation at 7.5 Ma with total exhumation of 2.5-4.5 km. The exhumation histories indicate that the three major faults (WMF, BYF and JGF) in the central LMS are all reverse faults, and show a basinward in-sequence propagation from middle Miocene to present-day. Such a pattern further implies that upper crustal shortening is the primary driver for the LMS' uplift during the Late Cenozoic. Nevertheless, middle-lower crustal deformation is difficult to be constrained by the exhumation histories, and its contribution to LMS' uplift cannot be ruled out.

  1. Late cenozoic magmatism in the South Patagonian batholith: SHRIMP U-Pb zircon age evidence

    International Nuclear Information System (INIS)

    Fanning, C.M; Herve, F; Pankhurst, R.J; Thomson, S; Faundez, V


    The North Patagonian Batholith (NPB) has a zonal age pattern which includes a well defined belt of Miocene and Mio-Pliocene plutons in its central portion (Pankhurst et al., 1999) which are spatially, and probably genetically related to the Liquine-Ofqui Fault Zone. Previous geochronological studies in the Southern Patagonian Batholith (SPB), as summarized by Bruce et al. (1991), have yielded 9 late Cenozoic K-Ar or Ar-Ar ages out of a total of 116 age determinations. None of these young ages correspond to U-Pb determinations on zircons, and some of the young ages correspond to satellite plutons east of the SPB proper, such as the Torres del Paine intrusion. In this paper we present the first late Cenozoic SHRIMP U-Pb zircon ages in the area of the SPB. The morphology of the analysed zircon crystals is described and leads to some inferences on the methodology and on the geological interpretation of the obtained ages (au)

  2. Tectonic implications of Mesozoic magmatism to initiation of Cenozoic basin development within the passive South China Sea margin (United States)

    Mai, Hue Anh; Chan, Yu Lu; Yeh, Meng Wan; Lee, Tung Yi


    The South China Sea (SCS) is one of the classical example of a non-volcanic passive margin situated within three tectonic plates of the Eurasian, Indo-Australian and Philippine Sea plate. The development of SCS resulted from interaction of various types of plate boundaries, and complex tectonic assemblage of micro blocks and accretionary prisms. Numerous models were proposed for the formation of SCS, yet none can fully satisfy different aspects of tectonic forces. Temporal and geographical reconstruction of Cretaceous and Cenozoic magmatism with the isochrones of major basins was conducted. Our reconstruction indicated the SE margin of Asia had gone through two crustal thinning events. The sites for rifting development are controlled by localized thermal weakening of magmatism. NW-SE extension setting during Late Cretaceous revealed by magmatism distribution and sedimentary basins allow us to allocate the retreated subduction of Pacific plate to the cause of first crustal thinning event. A magmatic gap between 75 and 65 Ma prior to the initiation of first basin rifting suggested a significant modification of geodynamic setting occurred. The Tainan basin, Pearl River Mouth basin, and Liyue basins started to develop since 65 Ma where the youngest Late Cretaceous magmatism concentrated. Sporadic bimodal volcanism between 65 and 40 Ma indicates further continental extension prior to the opening of SCS. The E-W extension of Malay basin and West Natuna began since late Eocene followed by N-S rifting of SCS as Neotethys subducted. The SCS ridge developed between Pearl River Mouth basin and Liyue basin where 40 Ma volcanic activities concentrated. The interaction of two continental stretching events by Pacific followed by Neotethys subduction with localized magmatic thermal weakening is the cause for the non-volcanic nature of SCS.

  3. Stratigraphic and structural relationships between Meso-Cenozoic Lagonegro basin and coeval carbonate platforms in southern Apennines, Italy (United States)

    Pescatore, Tullio; Renda, Pietro; Schiattarella, Marcello; Tramutoli, Mariano


    Lucanian segment — are shown by means of both regional and detailed geological cross-sections. The Lagonegro units constantly underlie the carbonate units originating from detachment and thrusting of the western platform and overlie the eastern (i.e. Apulian) platform. The Lagonegro units show a strong lateral variability of map-scale structures. Dome-and-basin folds are in fact largely observable in the Lucanian Apennine. Further, the belt is widely affected by Plio-Quaternary strike-slip and extensional faults. Yet, excluding the brittle deformation due to Quaternary faulting, the complexity of structural styles seems to result from the Neogene refolding of more ancient structures produced by Oligo-Miocene intraplate deformation. This hypothesis is supported by two independent lines of evidence: the first is the recognition of unconformities between the lower Miocene Numidian sandstone and the underlying Lagonegro successions, at least in the southwestern sectors; the second is that the internal (i.e. western) platform remains undeformed until the early Miocene. Both stratigraphic and structural data suggest an external position of the Meso-Cenozoic Lagonegro basin with regard to the coeval Apenninic platform.

  4. The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes

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    Lemieux Claude


    Full Text Available Abstract Background The phylum Chlorophyta contains the majority of the green algae and is divided into four classes. The basal position of the Prasinophyceae has been well documented, but the divergence order of the Ulvophyceae, Trebouxiophyceae and Chlorophyceae is currently debated. The four complete chloroplast DNA (cpDNA sequences presently available for representatives of these classes have revealed extensive variability in overall structure, gene content, intron composition and gene order. The chloroplast genome of Pseudendoclonium (Ulvophyceae, in particular, is characterized by an atypical quadripartite architecture that deviates from the ancestral type by a large inverted repeat (IR featuring an inverted rRNA operon and a small single-copy (SSC region containing 14 genes normally found in the large single-copy (LSC region. To gain insights into the nature of the events that led to the reorganization of the chloroplast genome in the Ulvophyceae, we have determined the complete cpDNA sequence of Oltmannsiellopsis viridis, a representative of a distinct, early diverging lineage. Results The 151,933 bp IR-containing genome of Oltmannsiellopsis differs considerably from Pseudendoclonium and other chlorophyte cpDNAs in intron content and gene order, but shares close similarities with its ulvophyte homologue at the levels of quadripartite architecture, gene content and gene density. Oltmannsiellopsis cpDNA encodes 105 genes, contains five group I introns, and features many short dispersed repeats. As in Pseudendoclonium cpDNA, the rRNA genes in the IR are transcribed toward the single copy region featuring the genes typically found in the ancestral LSC region, and the opposite single copy region harbours genes characteristic of both the ancestral SSC and LSC regions. The 52 genes that were transferred from the ancestral LSC to SSC region include 12 of those observed in Pseudendoclonium cpDNA. Surprisingly, the overall gene organization of

  5. Regionwide Geodynamic Analyses of the Cenozoic Carbonate Burial in Sri Lanka Related to Climate and Atmospheric CO2

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    Amila Sandaruwan Ratnayake


    Full Text Available Asian tectonism and exhumation are critical components to develop modern icehouse climate. In this study, stratigraphic sections of eight wells in the Mannar and Cauvery basins were considered. The author demonstrated that this local system records a wealth of information to understated regional and global paleoclimatic trends over the Cenozoic era. The lithostratigraphic framework has been generally characterized by deposition of carbonate-rich sediments since the Middle Cenozoic. Geological provenance of carbonate sediments had probably related to local sources from Sri Lankan and Indian land masses. The main controlling factor of carbonate burial is rather questionable. However, this carbonate burial has indicated the possible link to the Middle to Late Cenozoic global climatic transition. This major climatic shift was characterized by long-term reduction of atmospheric carbon dioxide concentration over the Cenozoic era. Consequently, this geological trend (carbonate burial has a straightforward teleconnection to the global cooling towards the glaciated earth followed by the development of polar ice sheets that persist today.

  6. DNA methylation profiling of sorted cells from myelofibrosis patients reveals aberrant epigenetic regulation of immune pathways and identifies early MPN driver genes

    DEFF Research Database (Denmark)

    Nielsen, Helene Myrtue; Andersen, Christen Lykkegaard; Kristensen, Lasse Sommer


    Background: Primary myelofibrosis (PMF) belongs to the heterogeneous group of chronic myeloproliferative neoplasms (MPN) together with essential thrombocytosis (ET) and polycythemia vera (PV). It has been suggested that these neoplasms represent a biological continuum from early cancer stage (ET...

  7. Multiple cooling episodes in the Central Tarim (Northwest China) revealed by apatite fission track analysis and vitrinite reflectance data (United States)

    Chang, Jian; Qiu, Nansheng; Song, Xinying; Li, Huili


    Apatite fission track and vitrinite reflectance are integrated for the first time to study the cooling history in the Central Tarim, northwest China. The paleo-temperature profiles from vitrinite reflectance data of the Z1 and Z11 wells showed a linear relationship with depth, suggesting an approximately 24.8 °C/km paleo-geothermal gradient and 2700-3900 m of erosion during the Early Mesozoic. The measured apatite fission track ages from well Z2 in the Central Tarim range from 39 to 159 Ma and effectively record the Meso-Cenozoic cooling events that occurred in Central Tarim. Moreover, two cooling events at 190-140 Ma in the Early Jurassic-Early Cretaceous and 80-45 Ma in the Late Cretaceous-Paleocene revealed by measured AFT data and thermal modeling results are related to the collisions of the Qiangtang-Lhasa terranes and the Greater India Plate with the southern margin of the Eurasian Plate, respectively. This study provides new insights into the tectonic evolution of the Tarim Basin (and more broadly Central Asia) and for hydrocarbon generation and exploration in the Central Tarim.

  8. Mesozoic and Cenozoic structural evolution of North Oman: New insights from high-quality 3D seismic from the Lekhwair area (United States)

    Bazalgette, Loïc; Salem, Hisham


    This paper highlights the role of Triassic-Jurassic extension and late Cretaceous compression in the Mesozoic-Cenozoic (Alpine) structuring of North Oman. The syn/post-Mesozoic regional structural evolution is usually documented as a succession of two stages of deformation. The Alpine 1 phase, late Cretaceous in age, occurred in association with two ophiolite obduction stages (Semail and Masirah ophiolites). It was characterised by strike slip to extensional deformation in the North Oman foreland basin sub-surface. The Alpine 2 phase, Miocene in age, was related to the continental collision responsible for both the Zagros orogen and the uplift of the Oman Mountains. The Alpine 2 deformation was transpressional to compressional. Observation and interpretation of good quality 3D seismic in the Lekhwair High area enabled the distinction of two earlier phases. Early Mesozoic extension occurred concomitantly with the regional Triassic to Jurassic rifting, developing Jurassic-age normal faults. Late Cretaceous compression occurred prior to the main Alpine 1 phase and triggered the inversion of Jurassic-seated normal faults as well as the initiation of compressional folds in the Cretaceous overburden. These early phases have been ignored or overlooked as part of the North Oman history although they are at the origin of structures hosting major local and regional hydrocarbon accumulations.

  9. The ATLAS3D project - IX. The merger origin of a fast- and a slow-rotating early-type galaxy revealed with deep optical imaging: first results (United States)

    Duc, Pierre-Alain; Cuillandre, Jean-Charles; Serra, Paolo; Michel-Dansac, Leo; Ferriere, Etienne; Alatalo, Katherine; Blitz, Leo; Bois, Maxime; Bournaud, Frédéric; Bureau, Martin; Cappellari, Michele; Davies, Roger L.; Davis, Timothy A.; de Zeeuw, P. T.; Emsellem, Eric; Khochfar, Sadegh; Krajnović, Davor; Kuntschner, Harald; Lablanche, Pierre-Yves; McDermid, Richard M.; Morganti, Raffaella; Naab, Thorsten; Oosterloo, Tom; Sarzi, Marc; Scott, Nicholas; Weijmans, Anne-Marie; Young, Lisa M.


    The mass assembly of galaxies leaves imprints in their outskirts, such as shells and tidal tails. The frequency and properties of such fine structures depend on the main acting mechanisms - secular evolution, minor or major mergers - and on the age of the last substantial accretion event. We use this to constrain the mass assembly history of two apparently relaxed nearby early-type galaxies (ETGs) selected from the ATLAS3D sample, NGC 680 and 5557. Our ultra-deep optical images obtained with MegaCam on the Canada-France-Hawaii Telescope reach 29 mag arcsec-2 in the g band. They reveal very low surface brightness (LSB) filamentary structures around these ellipticals. Among them, a gigantic 160 kpc long, narrow, tail east of NGC 5557 hosts three gas-rich star-forming objects, previously detected in H I with the Westerbork Synthesis Radio Telescope and in UV with GALEX. NGC 680 exhibits two major diffuse plumes apparently connected to extended H I tails, as well as a series of arcs and shells. Comparing the outer stellar and gaseous morphology of the two ellipticals with that predicted from models of colliding galaxies, we argue that the LSB features are tidal debris and that each of these two ETGs was assembled during a relatively recent, major wet merger, which most likely occurred after the redshift z ≃ 0.5 epoch. Had these mergers been older, the tidal features should have already fallen back or be destroyed by more recent accretion events. However, the absence of molecular gas and of a prominent young stellar population in the core region of the galaxies indicates that the merger is at least 1-2 Gyr old: the memory of any merger-triggered nuclear starburst has indeed been lost. The star-forming objects found towards the collisional debris of NGC 5557 are then likely tidal dwarf galaxies. Such recycled galaxies here appear to be long-lived and continue to form stars while any star formation activity has stopped in their parent galaxy. The inner kinematics of NGC

  10. Radioactive occurrence in sediments of Cenozoic age near Bandha village, Jaisalmer district, Rajasthan

    International Nuclear Information System (INIS)

    Gupta, Sumangal; Barik, Maninee P.; Ariketi, Ravinder; Jain, D.; Biswal, Samir


    The radioactivity is dependent on the isotope and their concentration in the mineral such as potassium (K), uranium (U) and thorium (Th). In this paper the presence of a 3 to 5 m thick uranium and thorium bearing sediment of Cenozoic age is reported above Goru Formation of Jaisalmer basin. Gamma ray log response of Well-1 which falls under the study area has marked with very high GR (gamma ray) readings ranging from 350-1488 API coupled with high uranium and thorium content from spectral gamma ray log ranging from 92-178 ppm and 60-80 ppm respectively at the depth of 50 m from ground surface (-110m above MSL). Further studies are required to delineate the lateral thickness variation for mining purpose which may be a radioactive source. (author)

  11. Petrographic and geochemical data for Cenozoic volcanic rocks of the Bodie Hills, California and Nevada (United States)

    du Bray, Edward A.; John, David A.; Box, Stephen E.; Vikre, Peter G.; Fleck, Robert J.; Cousens, Brian L.


    Petrographic and geochemical data for Cenozoic volcanic rocks of the Bodie Hills, California and Nevada // // This report presents petrographic and geochemical data for samples collected during investigations of Tertiary volcanism in the Bodie Hills of California and Nevada. Igneous rocks in the area are principally 15–6 Ma subduction-related volcanic rocks of the Bodie Hills volcanic field but also include 3.9–0.1 Ma rocks of the bimodal, post-subduction Aurora volcanic field. Limited petrographic results for local basement rocks, including Mesozoic granitoid rocks and their metamorphic host rocks, are also included in the compilation. The petrographic data include visual estimates of phenocryst abundances as well as other diagnostic petrographic criteria. The geochemical data include whole-rock major oxide and trace element data, as well as limited whole-rock isotopic data.

  12. Meso-cenozoic extensional tectonics and uranium metallogenesis in southeast China

    International Nuclear Information System (INIS)

    Chen Yuehui; Chen Zuyi; Cai Yuqi; Fu Jin; Feng Quanhong; Shi Zuhai


    Through a systematic study on Meso-Cenozoic extensional tectonics in Southeast China, the authors point out that there are three major types of extensional tectonics such as taphrogenic thermo-upwelling, and gravitational extensional tectonics. The characteristics of structural forms, combination patterns, movement style and syn-tectonic magmatism of different extensional tectonics are studied. Then according to the known isotope age data of uranium mineralizations in the area, the relations between the process of extensional tectonics and regional uranium metallogenesis, as well as the corresponding relations in space and time between extensional tectonics and uranium deposits of different types are analyzed. In conclusion, the authors suggest that the uranium mineralizations of different types in Southeast China are characterized by an united ore-forming mechanism due to the apparent control of extensional tectonics to the regional uranium metallogenesis

  13. Rates and style of Cenozoic deformation around the Gonghe Basin, northeastern Tibetan Plateau (United States)

    Craddock, William H.; Kirby, Eric; Zhang, Huiping; Clark, Marin K.; Champagnac, Jean-Daniel; Yuan, Daoyang


    The northeastern Tibetan Plateau constitutes a transitional region between the low-relief physiographic plateau to the south and the high-relief ranges of the Qilian Shan to the north. Cenozoic deformation across this margin of the plateau is associated with localized growth of fault-cored mountain ranges and associated basins. Herein, we combine detailed structural analysis of the geometry of range-bounding faults and deformation of foreland basin strata with geomorphic and exhumational records of erosion in hanging-wall ranges in order to investigate the magnitude, timing, and style of deformation along the two primary fault systems, the Qinghai Nan Shan and the Gonghe Nan Shan. Structural mapping shows that both ranges have developed above imbricate fans of listric thrust faults, which sole into décollements in the middle crust. Restoration of shortening along balanced cross sections suggests a minimum of 0.8–2.2 km and 5.1–6.9 km of shortening, respectively. Growth strata in the associated foreland basin record the onset of deformation on the two fault systems at ca. 6–10 Ma and ca. 7–10 Ma, respectively, and thus our analysis suggests late Cenozoic shortening rates of 0.2 +0.2/–0.1 km/m.y. and 0.7 +0.3/–0.2 km/m.y. along the north and south sides of Gonghe Basin. Along the Qinghai Nan Shan, these rates are similar to late Pleistocene slip rates of ∼0.10 ± 0.04 mm/yr, derived from restoration and dating of a deformed alluvial-fan surface. Collectively, our results imply that deformation along both flanks of the doubly vergent Qilian Shan–Nan Shan initiated by ca. 10 Ma and that subsequent shortening has been relatively steady since that time.

  14. Community Structure Analysis of Transcriptional Networks Reveals Distinct Molecular Pathways for Early- and Late-Onset Temporal Lobe Epilepsy with Childhood Febrile Seizures (United States)

    Moreira-Filho, Carlos Alberto; Bando, Silvia Yumi; Bertonha, Fernanda Bernardi; Iamashita, Priscila; Silva, Filipi Nascimento; Costa, Luciano da Fontoura; Silva, Alexandre Valotta; Castro, Luiz Henrique Martins; Wen, Hung-Tzu


    Age at epilepsy onset has a broad impact on brain plasticity and epilepsy pathomechanisms. Prolonged febrile seizures in early childhood (FS) constitute an initial precipitating insult (IPI) commonly associated with mesial temporal lobe epilepsy (MTLE). FS-MTLE patients may have early disease onset, i.e. just after the IPI, in early childhood, or late-onset, ranging from mid-adolescence to early adult life. The mechanisms governing early (E) or late (L) disease onset are largely unknown. In order to unveil the molecular pathways underlying E and L subtypes of FS-MTLE we investigated global gene expression in hippocampal CA3 explants of FS-MTLE patients submitted to hippocampectomy. Gene coexpression networks (GCNs) were obtained for the E and L patient groups. A network-based approach for GCN analysis was employed allowing: i) the visualization and analysis of differentially expressed (DE) and complete (CO) - all valid GO annotated transcripts - GCNs for the E and L groups; ii) the study of interactions between all the system’s constituents based on community detection and coarse-grained community structure methods. We found that the E-DE communities with strongest connection weights harbor highly connected genes mainly related to neural excitability and febrile seizures, whereas in L-DE communities these genes are not only involved in network excitability but also playing roles in other epilepsy-related processes. Inversely, in E-CO the strongly connected communities are related to compensatory pathways (seizure inhibition, neuronal survival and responses to stress conditions) while in L-CO these communities harbor several genes related to pro-epileptic effects, seizure-related mechanisms and vulnerability to epilepsy. These results fit the concept, based on fMRI and behavioral studies, that early onset epilepsies, although impacting more severely the hippocampus, are associated to compensatory mechanisms, while in late MTLE development the brain is less able to

  15. Gene expression profiling reveals different molecular patterns in G-protein coupled receptor signaling pathways between early- and late-onset preeclampsia. (United States)

    Liang, Mengmeng; Niu, Jianmin; Zhang, Liang; Deng, Hua; Ma, Jian; Zhou, Weiping; Duan, Dongmei; Zhou, Yuheng; Xu, Huikun; Chen, Longding


    Early-onset preeclampsia and late-onset preeclampsia have been regarded as two different phenotypes with heterogeneous manifestations; To gain insights into the pathogenesis of the two traits, we analyzed the gene expression profiles in preeclamptic placentas. A whole genome-wide microarray was used to determine the gene expression profiles in placental tissues from patients with early-onset (n = 7; 36 weeks) preeclampsia and their controls who delivered preterm (n = 5; 36 weeks). Genes were termed differentially expressed if they showed a fold-change ≥ 2 and q-value preeclampsia (177 genes were up-regulated and 450 were down-regulated). Gene ontology analysis identified significant alterations in several biological processes; the top two were immune response and cell surface receptor linked signal transduction. Among the cell surface receptor linked signal transduction-related, differentially expressed genes, those involved in the G-protein coupled receptor protein signaling pathway were significantly enriched. G-protein coupled receptor signaling pathway related genes, such as GPR124 and MRGPRF, were both found to be down-regulated in early-onset preeclampsia. The results were consistent with those of western blotting that the abundance of GPR124 was lower in early-onset compared with late-onset preeclampsia. The different gene expression profiles reflect the different levels of transcription regulation between the two conditions and supported the hypothesis that they are separate disease entities. Moreover, the G-protein coupled receptor signaling pathway related genes may contribute to the mechanism underlying early- and late-onset preeclampsia. Copyright © 2016 Elsevier Ltd. All rights reserved.

  16. Geologic strip map along the Hines Creek Fault showing evidence for Cenozoic displacement in the western Mount Hayes and northeastern Healy quadrangles, eastern Alaska Range, Alaska (United States)

    Nokleberg, Warren J.; Aleinikoff, John N.; Bundtzen, Thomas K.; Hanshaw, Maiana N.


    Geologic mapping of the Hines Creek Fault and the adjacent Trident Glacier and McGinnis Glacier Faults to the north in the eastern Alaska Range, Alaska, reveals that these faults were active during the Cenozoic. Previously, the Hines Creek Fault, which is considered to be part of the strike-slip Denali Fault system (Ridgway and others, 2002; Nokleberg and Richter, 2007), was interpreted to have been welded shut during the intrusion of the Upper Cretaceous Buchanan Creek pluton (Wahrhaftig and others, 1975; Gilbert, 1977; Sherwood and Craddock, 1979; Csejtey and others, 1992). Our geologic mapping along the west- to west-northwest-striking Hines Creek Fault in the northeastern Healy quadrangle and central to northwestern Mount Hayes quadrangle reveals that (1) the Buchanan Creek pluton is truncated by the Hines Creek Fault and (2) a tectonic collage of fault-bounded slices of various granitic plutons, metagabbro, metabasalt, and sedimentary rock of the Pingston terrane occurs south of the Hines Creek Fault.

  17. Cenozoic global sea level, sequences, and the New Jersey transect: Results from coastal plain and continental slope drilling (United States)

    Miller, K.G.; Mountain, Gregory S.; Browning, J.V.; Kominz, M.; Sugarman, P.J.; Christie-Blick, N.; Katz, M.E.; Wright, J.D.


    The New Jersey Sea Level Transect was designed to evaluate the relationships among global sea level (eustatic) change, unconformity-bounded sequences, and variations in subsidence, sediment supply, and climate on a passive continental margin. By sampling and dating Cenozoic strata from coastal plain and continental slope locations, we show that sequence boundaries correlate (within ??0.5 myr) regionally (onshore-offshore) and interregionally (New Jersey-Alabama-Bahamas), implicating a global cause. Sequence boundaries correlate with ??18O increases for at least the past 42 myr, consistent with an ice volume (glacioeustatic) control, although a causal relationship is not required because of uncertainties in ages and correlations. Evidence for a causal connection is provided by preliminary Miocene data from slope Site 904 that directly link ??18O increases with sequence boundaries. We conclude that variation in the size of ice sheets has been a primary control on the formation of sequence boundaries since ~42 Ma. We speculate that prior to this, the growth and decay of small ice sheets caused small-amplitude sea level changes (changes on mid-ocean ridges. Although our results are consistent with the general number and timing of Paleocene to middle Miocene sequences published by workers at Exxon Production Research Company, our estimates of sea level amplitudes are substantially lower than theirs. Lithofacies patterns within sequences follow repetitive, predictable patterns: (1) coastal plain sequences consist of basal transgressive sands overlain by regressive highstand silts and quartz sands; and (2) although slope lithofacies variations are subdued, reworked sediments constitute lowstand deposits, causing the strongest, most extensive seismic reflections. Despite a primary eustatic control on sequence boundaries, New Jersey sequences were also influenced by changes in tectonics, sediment supply, and climate. During the early to middle Eocene, low siliciclastic and

  18. The ``Problem of the quaternary'' and the taxonomic rank of the late cenozoic in the international stratigraphic scale (United States)

    Zubakov, V. A.


    An international scientific conflict has arisen around the International Stratigraphic Scale, the main document that regulates the rules of reading of geological records and, hence, concerns all Earth sciences. The matter of debate is the geological time scale of 2004, developed by the International Commission on Stratigraphy, where the Quaternary system was abandoned. This ICS decision triggered a protest among Quaternary geologists, members of INQUA, and became the subject of much controversy. This article provides a comprehensive analysis of the Quaternary problem and proposes a reasonable scientific solution that may be appropriate for both parties. The subject of Late Cenozoic geology is discussed: glaciations, human evolution, and recent deposits. In contrast to Charles Lyell's definition of the Plio-Pleistocene according to the percentage of modern mollusk species, it is defined here as a blanket formation, which is correlative to the topography and consists of mapped stratogens hosting fossils of modern biogeocenoses. Features of the description of the Plio-Pleistocene in terms of gravitational orbital tuning are considered. Four paleogeographic phases of modern environment evolution are recognized and ranked as stages: (1) The Messinian evolutionary explosion involved the appearance of many biogeocenoses and the bipedal walking of our extinct ancestors armed with sticks. It was a consequence of the Early Greenland (7.6 Ma BP) and Patagonian (6.7 Ma BP) hyperglaciations. (2) The Zanclean age is marked by climatic and hydrological but not evolutionary boundaries. (3) The appearance of the Villafranchian animal assemblage and Australopithecus, who used stones as weapon: 4.0-3.6 Ma BP. Orogeny and isolation of the Arctic Ocean changed the global climate dramatically. (4) The sexual revolution became the third evolutionary jump: the appearance of the first woman, "Eve", and the genus Homo with her: 1.9 Ma BP. According to the current view, the Plio

  19. Heterogeneous Cenozoic cooling of central Britain: insights into the complex evolution of the North Atlantic passive margin (United States)

    Łuszczak, Katarzyna; Persano, Cristina; Stuart, Finlay


    The western flank of the North Atlantic passive margin has experienced multiple episodes of rock uplift and denudation during the Cenozoic that have been locally variable in scale. Two regional scale exhumation events have been identified: early Palaeogene and Neogene [see 1 for review]. The former has been identified both onshore and offshore and it appears to be temporally coincident with basaltic magmatism related to the arrival of the proto-Iceland mantle plume beneath thinned continental lithosphere, which may have cause long wavelength, low amplitude dynamic uplift. Quantifying the amount of early Palaeogene exhumation using mineral thermochronometers may be complicated by elevated heat flow. The magnitude and timing of exhumation during the Neogene is even less clear, as is the driving mechanism. Quantifying the amount of early Palaeogene exhumation, determining the precise timing as well as the amount of uplift and erosion in the Neogene, require detailed application of low temperature thermochronometers. Here we present the first multiple low temperature thermochronometer study from S Scotland, N England and N Wales. New apatite fission track (AFT) data are integrated with apatite and zircon (U-Th-Sm)/He (AHe and ZHe, respectively) ages to establish regional rock cooling history from 200°C to 30°C. To precisely constrain the early Palaeogene cooling history, and to better define the possible Neogene cooling event, >20 single grain AHe ages have been produced on key samples and modelled using the newly codified HelFrag technique. The new AFT and AHe ages confirm earlier studies that show the Lake District and North Pennines experienced rapid cooling from >120°C in the Palaeogene. The amount of cooling/exhumation gradually decreases northwards into S Scotland and southwards in N Wales; there is no evidence for the rapid Palaeogene event in areas ~70 km from the Lake District centre. Inverse modelling of the AHe and AFT data suggest that the rapid cooling

  20. A review of the paleomagnetic data from Cretaceous to lower Tertiary rocks from Vietnam, Indochina and South China, and their implications for Cenozoic tectonism in Vietnam and adjacent areas (United States)

    Cung, Thu'ọ'ng Chí; Geissman, John W.


    Available paleomagnetic data from rock formations of Cretaceous age from Vietnam, Indochina and South China are compiled and reviewed in the context of their tectonic importance in a common reference frame with respect to Eurasia's coeval paleopoles. Key factors that play an important role in determining the reliability of a paleomagnetic result for utilization in tectonic studies have been taken into consideration and include the absence of evidence of remagnetization, which is a feature common to many rocks in this region. Overall, the Cretaceous paleomagnetic data from the South China Block show that the present geographic position of the South China Block has been relatively stable with respect to Eurasia since the mid-Cretaceous and that the paleomagnetically detected motion of a coherent lithospheric block must be based on the representative data obtained from different specific localities across the block in order to separate more localized, smaller scale deformation from true lithosphere scale motion (translation and/or rotation) of a tectonic block. Cretaceous to early Tertiary paleomagnetic data from the Indochina-Shan Thai Block reveal complex patterns of intra-plate deformation in response to the India-Eurasia collision. Paleomagnetically detected motions from the margins of tectonic blocks are interpreted to mainly reflect displacement of upper crustal blocks due to folding and faulting processes. Rigid, lithosphere scale block rotation is not necessarily supported by the paleomagnetic data. The paleomagnetic results from areas east and south of the Red River fault system suggest that this major transcurrent fault system has had a complicated slip history through much of the Cenozoic and that it does not demarcate completely non-rotated and significantly rotated parts of the crust in this area. However, most paleomagnetic results from areas east and south of the Red River fault system at the latitude of Yunnan Province are consistent with a very modest

  1. Late cenozoic tectonic and geomorphic evolution of the Patagonian Andes between 42oS and 52oS, southern Chile assessed using fission-track thermochronology

    International Nuclear Information System (INIS)

    Thomson, S.N; Herve, F; Stockhert, B.; Brix, M.R.; Adriasola, A


    Fission-track (FT) analysis has been applied in the Patagonian Andes of southern Chile to assess the late Cenozoic geomorphic and tectonic response of the overriding plate to subduction of the Chile rise active oceanic spreading centre (Thomson et al., 2001). The timing and nature of tectonic uplift and denudation along the southern parts of the major transpression intra-arc Liquine-Ofqui fault (LOF) system have also been investigated (Thomson, 2001, submitted). Results from 130 FT ages (72 zircon and 58 apatite ages) and 39 apatite track length measurements reveal initiation of rapid cooling and denudation at ca. 30 Ma at the western margin of southern continental South America. This was followed by a ca. 200km eastward migration of the locus of maximum denudation to the position of the present day topographic divide between ca. 30 Ma and ca. 12 to 10 Ma. East of the Andean divide less than 3 km of denudation has occurred since the Late Cretaceous. Enhanced denudation is interpreted to be the result of increased tectonic uplift driven by a large increase in convergence rates at ca. 28 to 26 Ma that triggered orographically enhanced precipitation on the west-side of the Patagonian Andes allowing increased erosion by fluvial incision and mass transport processes. The eastward migration of the locus of maximum denudation can be related to either coeval eastward migration of the retro-arc deformation front, the effects of subduction erosion in the overriding plate at the Peru-Chile trench or shallowing of the angle of subduction. Away from the influence of the LOF the process of spreading centre subduction and collision itself coincides with an overall slow-down in denudation rates in the overriding plate most likely caused by a major reduction in the main tectonic force driving tectonic uplift in the upper plate to subduction. In contrast to the Andes south of ca. 46 o S, increased cooling and denudation related to transpression induced rock uplift and erosion along

  2. Cenozoic exhumation and tectonic evolution of the Qimen Tagh Range, northern Tibetan Plateau: Insights from the heavy mineral compositions, detrital zircon U-Pb ages and seismic interpretations (United States)

    Zhu, W.; Wu, C.; Wang, J.; Zhou, T.; Zhang, C.; Li, J.


    The Qaidam Basin is the largest intermountain basin within the Tibetan Plateau. The Cenozoic sedimentary flling characteristics of the basin was significantly influenced by the surrounding tectonic belt, such as the Altyn Tagh Range to the north-west and Qimen Tagh Range to the south. The tectonic evolution of the Qimen Tagh Range and the structural relationship between the Qaidam Basin and Qimen Tagh Range remain controversial. To address these issues, we analyzed thousands of heavy mineral data, 720 detrital zircon ages and seismic data of the Qaidam Basin. Based on the regional geological framework and our kinematic analyses, the Cenozoic tectonic evolution of the Qimen Tagh Range can be divided into two stages. From the Early Eocene to the Middle Miocene, the Devonian (400-360 Ma) and Permian to Triassic (300-200 Ma) zircons which were sourced from the Qimen Tagh Range and the heavy mineral assemblage of zircon-leucoxene-garnet-sphene on the north flank of the Qimen Tagh Range indicated that the Qimen Tagh Range has been exhumed before the Eocene and acted as the primary provenance of the Qaidam Basin. The Kunbei fault system (i.e. the Kunbei, Arlar and Hongliuquan faults) in the southwest of the Qaidam Basin, which can be seen as a natural study window of the Qimen Tagh Range, was characterized by left-lateral strike-slip faults and weak south-dipping thrust faults based on the seismic sections. This strike-slip motion was generated by the uplift of the Tibetan Plateau caused by the onset of the Indian-Eurasian collision. Since the Middle Miocene, the primary mineral assemblages along the northern flank of the Qimen Tagh Range changed from the zircon-leucoxene-garnet-sphene assemblage to the epidote-hornblende-garnet-leucoxene assemblage. Simultaneously, the Kunbei fault system underwent intense south-dipping thrusting, and a nearly 2.2-km uplift can be observed in the hanging wall of the Arlar fault. We attributed these variations to the rapid uplift event of

  3. Meso-Cenozoic tectonic evolution of the SE Brazilian continental margin: Petrographic, kinematic and dynamic analysis of the onshore Araruama Lagoon Fault System (United States)

    Souza, Pricilla Camões Martins de; Schmitt, Renata da Silva; Stanton, Natasha


    The Ararauama Lagoon Fault System composes one of the most prominent set of lineaments of the SE Brazilian continental margin. It is located onshore in a key tectonic domain, where the basement inheritance rule is not followed. This fault system is characterized by ENE-WSW silicified tectonic breccias and cataclasites showing evidences of recurrent tectonic reactivations. Based on field work, microtectonic, kinematic and dynamic analysis, we reconstructed the paleostresses in the region and propose a sequence of three brittle deformational phases accountable for these reactivations: 1) NE-SW dextral transcurrence; 2) NNW-SSE dextral oblique extension that evolved to NNW-SSE "pure" extension; 3) ENE-WSW dextral oblique extension. These phases are reasonably correlated with the tectonic events responsible for the onset and evolution of the SE onshore rift basins, between the Neocretaceous and Holocene. However, based on petrographic studies and supported by regional geological correlations, we assume that the origin of this fault system is older, related to the Early Cretaceous South Atlantic rifting. This study provides significant information about one of the main structural trends of the SE Brazilian continental margin and the tectonic events that controlled its segmentation, since the Gondwana rifting, and compartmentalization of its onshore sedimentary deposits during the Cenozoic.

  4. Early transcriptome analyses of Z-3-Hexenol-treated zea mays revealed distinct transcriptional networks and anti-herbivore defense potential of green leaf volatiles.

    Directory of Open Access Journals (Sweden)

    Jurgen Engelberth

    Full Text Available Green leaf volatiles (GLV, which are rapidly emitted by plants in response to insect herbivore damage, are now established as volatile defense signals. Receiving plants utilize these molecules to prime their defenses and respond faster and stronger when actually attacked. To further characterize the biological activity of these compounds we performed a microarray analysis of global gene expression. The focus of this project was to identify early transcriptional events elicited by Z-3-hexenol (Z-3-HOL as our model GLV in maize (Zea mays seedlings. The microarray results confirmed previous studies on Z-3-HOL -induced gene expression but also provided novel information about the complexity of Z-3-HOL -induced transcriptional networks. Besides identifying a distinct set of genes involved in direct and indirect defenses we also found significant expression of genes involved in transcriptional regulation, Ca(2+-and lipid-related signaling, and cell wall reinforcement. By comparing these results with those obtained by treatment of maize seedlings with insect elicitors we found a high degree of correlation between the two expression profiles at this early time point, in particular for those genes related to defense. We further analyzed defense gene expression induced by other volatile defense signals and found Z-3-HOL to be significantly more active than methyl jasmonate, methyl salicylate, and ethylene. The data presented herein provides important information on early genetic networks that are activated by Z-3-HOL and demonstrates the effectiveness of this compound in the regulation of typical plant defenses against insect herbivores in maize.

  5. Magnetic fabrics of arc plutons reveal a significant Late Jurassic to Early Cretaceous change in the relative plate motions of the Pacific Ocean basin and North America

    Czech Academy of Sciences Publication Activity Database

    Žák, J.; Verner, K.; Tomek, Filip; Johnson, K.; Schwartz, J. J.


    Roč. 13, č. 1 (2017), s. 11-21 ISSN 1553-040X Grant - others:AV ČR(CZ) MSM100131601 Program:Program na podporu mezinárodní spolupráce začínajících výzkumných pracovníků Institutional support: RVO:67985831 Keywords : PB geochronology * Late Jurassic/Early Cretaceous * Blue Mountains province Subject RIV: DB - Geology ; Mineralogy OBOR OECD: Geology Impact factor: 2.304, year: 2016

  6. High performance mass spectrometry based proteomics reveals enzyme and signaling pathway regulation in neutrophils during the early stage of surgical trauma

    DEFF Research Database (Denmark)

    Arshid, Samina; Tahir, Muhammad; Fontes, Belchor


    and surgical trauma rats in this study. Extracted proteins were analyzed using nano liquid chromatography coupled to tandem mass spectrometry. A total of 2924 rat neutrophil proteins were identified in our analysis, of which 393 were found differentially regulated between control and trauma groups. By using...... functional pathways analysis of the 190 proteins up-regulated in surgical trauma we found proteins related to transcription initiation and protein biosynthesis. On the other hand, among the 203 proteins down-regulated in surgical trauma we found enrichment for proteins of the immune response, proteasome...... degradation and actin cytoskeleton. Overall, enzyme prediction analysis revealed that regulated enzymes are directly involved in neutrophil apoptosis, directional migration and chemotaxis. Our observations were then confirmed by in silico protein-protein interaction analysis. Collectively, our results reveal...

  7. Interactions between magma and the lithospheric mantle during Cenozoic rifting in Central Europe (United States)

    Meyer, Romain; Elkins-Tanton, Linda T.


    During the Cenozoic, extensive intraplate volcanic activity occurred throughout Central Europe. Volcanic eruptions extend over France (the Massif Central), central Germany (Eifel, Vogelsberg, Rhön; Heldburg), the Czech Republic (the Eger graben) and SW Poland (Lower Silesia), a region ~1,200 km wide. The origin of this predominantly alkaline intraplate magmatism is often genetically linked to one or several mantle plumes, but there is no convincing evidence for this. We have measured Pb isotope ratios, together with major and trace elements, in a representative set of mafic to felsic igneous rocks from the intra-plate Cenozoic Rhön Mts. and the Heldburg dike swarm in order to gain insight into the melting source and petrogenetic history of these melts. Three different mafic rock types (tholeiitic basalt, alkali basalt, basanite) were distinguished based on petrography and geochemistry within the investigated areas. Except for the lherzolite-bearing phonolite from the Veste Heldburg all other evolved magmas are trachytes. REE geochemistry and calculated partial melting modeling experiments for the three mafic magma types point to different degrees of partial melting in a garnet-bearing mantle source. In addition a new version of the ternary Th-Hf-Ta diagram is presented in this study as a useful petrological tool. This diagram is not only able to define potentially involved melting source end-members (e.g. asthenosphere, sub-continental lithospheric mantle and continental crust) but also interactions between these members are illustrated. An advantage of this diagram compared to partial melting degree sensitive multi-element diagrams is that a ternary diagram is a closed system. An earlier version of this diagram has been recently used to establish the nature and extent of crust mantle melt interaction of volcanic rifted margins magmas (Meyer et al. 2009). The Th-Hf-Ta geochemistry of the investigated magmas is similar to spinel and garnet xenoliths from different

  8. Study on Sr-Nd isotopes of mesozoic-cenozoic granites in Qinghai-Tibetan plateau

    International Nuclear Information System (INIS)

    Qiu Ruizhao; Deng Jinfu; Zhou Su; Xiao Qinghui; Cai Zhiyong


    Mesozoic-Cenozoic magmatic activities were intensive in Qinghai-Tibetan plateau. Nd-Sr isotopic compositions of representative granitic plutons in western Qinghai-Tibetan plateau are reported in this paper. Combining with past isotopic data, which has reported in eastern Qinghai-Tibetan plateau, Sr-Nd isotopic compositions and material source and genesis of Mesozoic and Cenozoic granites in Qinghai-Tibetan plateau have been studied. The research result indicates there are three types of granite existing in Qinghai-Tibetan plateau, the granites of Late stage of Yanshan Period which distributing on north and south boundary of Gandes block (namely in north and south granitic belts of Dangdes) and cause of oceanic crust subduction, have ( 87 Sr/ 86 Sr)i of 0.7041-0.7064, ε (Nd) t of +2.5 - +5.7 and TDM age of 312-562 Ma, positive ε Nd, low ( 87 Sr/ 86 Sr)i ratio and young Nd model ages suggest relatively high contents of mantle-derived components in their sources, and this type granite might melt from subduction oceanic crust. The granites occurred intra-Gangdes block which were caused by collision of continent and post-collision, have ( 87 Sr/ 86 Sr)i of 0.706-0.719, ε (Nd) t of -5.3 - -8.3 and TDM age of 1323-1496 Ma, negative ε Nd, relative high ( 87 Sr/ 86 Sr)i ratio with an mid-Proterozoic Nd model ages, suggest granite has the mixing genesis of mantle-derived components and old crustal components in their sources. With relatively small variation range in ε (Nd) t and TDM age, it might imply granitic isotopic source in Gandes block to keep relative homogenization in long period. The granites in Himalayan block which there is not oceanic material to join in melting and to cause of intra-continental subduction, has most ( 87 Sr/ 86 Sr)i ratio more than 0.720, ε (Nd) t of -10.3 - -16.3 and TDM age of 1792-2206 Ma, high ( 87 Sr/ 86 Sr)i ratio, low negative ε (Nd)t with old Nd isotopic model ages and consistent with the Sr, Nd isotopic compositions of basement

  9. Evolution of basin architecture in an incipient continental rift: the Cenozoic Most Basin, Eger Graben (Central Europe)

    Czech Academy of Sciences Publication Activity Database

    Rajchl, M.; Uličný, David; Grygar, R.; Mach, K.


    Roč. 21, č. 3 (2009), s. 269-294 ISSN 0950-091X R&D Projects: GA AV ČR IAA3012705; GA ČR GA205/01/0629; GA ČR(CZ) GA205/06/1823 Institutional research plan: CEZ:AV0Z30120515 Keywords : Cenozoic Most Basin * continental rift * Eger Graben Subject RIV: DB - Geology ; Mineralogy Impact factor: 2.161, year: 2009

  10. Cenozoic fossil fishes of the extinct alepisauroid family Polymerichthyidae from the Sakhalin Island, Russia

    Directory of Open Access Journals (Sweden)

    Mikhail V. Nazarkin


    Full Text Available Five incomplete skeletons of fishes of the extinct monotypic family Polymerichthyidae (Aulopiformes: Alepisauroidei from the Paleogene and Neogene of Sakhalin Island, Russia, are identified as Polymerichthys sp., described in detail, and compared with known representatives of the family. The results of this study suggest that polymerichthyids were characterized by a prolonged rostrum, behind which the upper jaw symphysis was placed; by an anal fin without spinules, contrary to what was assumed earlier; and, probably, by sexual dimorphism. Morphological analysis reveals the closest relationships of Polymerichthyidae to be with Recent Alepisauridae, but their taxonomic position is still unresolved. The new material is the second occurrence of articulated skeleton of fishes of this family. The new findings from Sakhalin expand the known geographical distribution of Pacific polymerichthyids by about 12° of latitude, and extend the time interval for this family to as early as the late Oligocene.

  11. Diffusion tractography and graph theory analysis reveal the disrupted rich-club organization of white matter structural networks in early Tourette Syndrome children (United States)

    Wen, Hongwei; Liu, Yue; Wang, Shengpei; Zhang, Jishui; Peng, Yun; He, Huiguang


    Tourette syndrome (TS) is a childhood-onset neurobehavioral disorder. At present, the topological disruptions of the whole brain white matter (WM) structural networks remain poorly understood in TS children. Considering the unique position of the topologically central role of densely interconnected brain hubs, namely the rich club regions, therefore, we aimed to investigate whether the rich club regions and their related connections would be particularly vulnerable in early TS children. In our study, we used diffusion tractography and graph theoretical analyses to explore the rich club structures in 44 TS children and 48 healthy children. The structural networks of TS children exhibited significantly increased normalized rich club coefficient, suggesting that TS is characterized by increased structural integrity of this centrally embedded rich club backbone, potentially resulting in increased global communication capacity. In addition, TS children showed a reorganization of rich club regions, as well as significantly increased density and decreased number in feeder connections. Furthermore, the increased rich club coefficients and feeder connections density of TS children were significantly positively correlated to tic severity, indicating that TS may be characterized by a selective alteration of the structural connectivity of the rich club regions, tending to have higher bridging with non-rich club regions, which may increase the integration among tic-related brain circuits with more excitability but less inhibition for information exchanges between highly centered brain regions and peripheral areas. In all, our results suggest the disrupted rich club organization in early TS children and provide structural insights into the brain networks.

  12. Cenozoic tectonic and climatic events in southern Iberian Peninsula: Implications for the evolutionary history of freshwater fish of the genus Squalius (Actinopterygii, Cyprinidae). (United States)

    Perea, Silvia; Cobo-Simon, Marta; Doadrio, Ignacio


    Southern Iberian freshwater ecosystems located at the border between the European and African plates represent a tectonically complex region spanning several geological ages, from the uplifting of the Betic Mountains in the Serravalian-Tortonian periods to the present. This area has also been subjected to the influence of changing climate conditions since the Middle-Upper Pliocene when seasonal weather patterns were established. Consequently, the ichthyofauna of southern Iberia is an interesting model system for analyzing the influence of Cenozoic tectonic and climatic events on its evolutionary history. The cyprinids Squalius malacitanus and Squalius pyrenaicus are allopatrically distributed in southern Iberia and their evolutionary history may have been defined by Cenozoic tectonic and climatic events. We analyzed MT-CYB (510 specimens) and RAG1 (140 specimens) genes of both species to reconstruct phylogenetic relationships and to estimate divergence times and ancestral distribution ranges of the species and their populations. We also assessed their levels of genetic structure and diversity as well as the amount of gene flow between populations. To investigate recent paleogeographical and climatic factors in southern Iberia, we modeled changes-through-time in sea level from the LGM to the present. Phylogenetic, geographic and population structure analyses revealed two well-supported species (S. malacitanus and S. pyrenaicus) in southern Iberia and two subclades (Atlantic and Mediterranean) within S. malacitanus. The origin of S. malacitanus and the separation of its Atlantic and Mediterranean populations occurred during the Serravalian-Tortonian and Miocene-Pliocene periods, respectively. These divergence events occurred in the Middle Pliocene and Pleistocene in S. pyrenaicus. In both species, Atlantic basins possessed populations with higher genetic diversity than Mediterranean, which may be explained by the Janda Lagoon. The isolation of S. malacitanus was

  13. Examination of two lowland rice cultivars reveals that gibberellin-dependent early response to submergence is not necessarily mediated by ethylene. (United States)

    Dubois, Vincent; Moritz, Thomas; García-Martínez, José L


    Using two lowland rice (Oryza sativa L.) cultivars we found that in both cases submerged-induced elongation early after germination depends on gibberellins (GAs). Submergence increases the content of the active GA 1 by enhancing the expression of GA biosynthesis genes, thus facilitating the seedlings to escape from the water and preventing asphyxiation. However, the two cultivars differ in their response to ethylene. The cultivar Senia (short), by contrast to cultivar Bomba (tall), does not elongate after ethylene application, and submerged-induced elongation is not negated by an inhibitor of ethylene perception. Also, while ethylene emanation in Senia is not altered by submergence, Bomba seedlings emanate more ethylene upon de-submergence, associated with enhanced expression of the ethylene biosynthesis gene OsACS5. The cultivar Senia thus allows the possibility of clarifying the role of ethylene and other factors as triggers of GA biosynthesis enhancement in rice seedlings under submergence.

  14. Transmission of clonal hepatitis C virus genomes reveals the dominant but transitory role of CD8¿ T cells in early viral evolution

    DEFF Research Database (Denmark)

    Callendret, Benoît; Bukh, Jens; Eccleston, Heather B


    occurred slowly over several years of chronic infection. Together these observations indicate that during acute hepatitis C, virus evolution was driven primarily by positive selection pressure exerted by CD8(+) T cells. This influence of immune pressure on viral evolution appears to subside as chronic......The RNA genome of the hepatitis C virus (HCV) diversifies rapidly during the acute phase of infection, but the selective forces that drive this process remain poorly defined. Here we examined whether Darwinian selection pressure imposed by CD8(+) T cells is a dominant force driving early amino acid...... replacement in HCV viral populations. This question was addressed in two chimpanzees followed for 8 to 10 years after infection with a well-defined inoculum composed of a clonal genotype 1a (isolate H77C) HCV genome. Detailed characterization of CD8(+) T cell responses combined with sequencing of recovered...

  15. De novo analysis of Wolfiporia cocos transcriptome to reveal the differentially expressed carbohydrate-active enzymes (CAZymes genes during the early stage of sclerotial growth

    Directory of Open Access Journals (Sweden)

    Shaopeng eZhang


    Full Text Available The sclerotium of Wolfiporia cocos has been used as an edible mushroom and/or a traditional herbal medicine for centuries. W. cocos sclerotial formation is dependent on parasitism of the wood of Pinus species. Currently, the sclerotial development mechanisms of W. cocos remain largely unknown and the lack of pine resources limit the commercial production. The CAZymes (carbohydrate-active enzymes play important roles in degradation of the plant cell wall to provide carbohydrates for fungal growth, development and reproduction. In this study, the transcript profiles from W. cocos mycelium and two-months-old sclerotium, the early stage of sclerotial growth, were specially analyzed using de novo sequencing technology. A total of 142,428,180 high-quality reads of mycelium and 70,594,319 high-quality reads of two-months-old sclerotium were obtained. Additionally, differentially expressed genes from the W. cocos mycelium and two-months-old sclerotium stages were analyzed, resulting in identification of 69 CAZymes genes which were significantly up-regulated during the early stage of sclerotial growth compared to that of in mycelium stage, and more than half of them belonged to glycosyl hydrolases (GHs family, indicating the importance of W. cocos GHs family for degrading the pine woods. And qRT-PCR was further used to confirm the expression pattern of these up-regulated CAZymes genes. Our results will provide comprehensive CAZymes genes expression information during W. cocos sclerotial growth at the transcriptional level and will lay a foundation for functional genes studies in this fungus. In addition, our study will also facilitate the efficient use of limited pine resources, which is significant for promoting steady development of Chinese W. cocos industry.

  16. Eye Tracking Reveals Abnormal Visual Preference for Geometric Images as an Early Biomarker of an Autism Spectrum Disorder Subtype Associated With Increased Symptom Severity. (United States)

    Pierce, Karen; Marinero, Steven; Hazin, Roxana; McKenna, Benjamin; Barnes, Cynthia Carter; Malige, Ajith


    Clinically and biologically, autism spectrum disorder (ASD) is heterogeneous. Unusual patterns of visual preference as indexed by eye tracking are hallmarks; however, whether they can be used to define an early biomarker of ASD as a whole or leveraged to define a subtype is unclear. To begin to examine this issue, large cohorts are required. A sample of 334 toddlers from six distinct groups (115 toddlers with ASD, 20 toddlers with ASD features, 57 toddlers with developmental delay, 53 toddlers with other conditions [e.g., premature birth, prenatal drug exposure], 64 toddlers with typical development, and 25 unaffected toddlers with siblings with ASD) was studied. Toddlers watched a movie containing geometric and social images. Fixation duration and number of saccades within each area of interest and validation statistics for this independent sample were computed. Next, to maximize power, data from our previous study (n = 110) were added for a total of 444 subjects. A subset of toddlers repeated the eye-tracking procedure. As in the original study, a subset of toddlers with ASD fixated on geometric images >69% of the time. Using this cutoff, sensitivity for ASD was 21%, specificity was 98%, and positive predictive value was 86%. Toddlers with ASD who strongly preferred geometric images had 1) worse cognitive, language, and social skills relative to toddlers with ASD who strongly preferred social images and 2) fewer saccades when viewing geometric images. Unaffected siblings of ASD probands did not show evidence of heightened preference for geometric images. Test-retest reliability was good. Examination of age effects suggested that this test may not be appropriate with children >4 years old. Enhanced visual preference for geometric repetition may be an early developmental biomarker of an ASD subtype with more severe symptoms. Copyright © 2016 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.

  17. Eye-tracking Reveals Abnormal Visual Preference for Geometric Images as an Early Biomarker of an ASD Subtype Associated with Increased Symptom Severity (United States)

    Pierce, Karen; Marinero, Steven; Hazin, Roxana; McKenna, Benjamin; Barnes, Cynthia Carter; Malige, Ajith


    Background Clinically and biologically, ASD is heterogeneous. Unusual patterns of visual preference as indexed by eye-tracking are hallmarks, yet whether they can be used to define an early biomarker of ASD as a whole, or leveraged to define a subtype is unclear. To begin to examine this issue, large cohorts are required. Methods A sample of 334 toddlers from 6 distinct groups (115 ASD, 20 ASD-Features, 57 DD, 53 Other, 64 TD, and 25 Typ SIB) participated. Toddlers watched a movie containing both geometric and social images. Fixation duration and number of saccades within each AOI and validation statistics for this independent sample computed. Next, to maximize power, data from our previous study (N=110) was added totaling 444 subjects. A subset of toddlers repeated the eye-tracking procedure. Results As in the original study, a subset of toddlers with ASD fixated on geometric images greater than 69%. Using this cutoff, sensitivity for ASD was 21%, specificity 98%, and PPV 86%. Toddlers with ASD who strongly preferred geometric images had (a) worse cognitive, language, and social skills relative to toddlers with ASD who strongly preferred social images and (b) fewer saccades when viewing geometric images. Unaffected siblings of ASD probands did not show evidence of heightened preference for geometric images. Test-retest reliability was good. Examination of age effects suggest that this test may not be appropriate with children > 4 years. Conclusions Enhanced visual preference for geometric repetition may be an early developmental biomarker of an ASD subtype with more severe symptoms. PMID:25981170

  18. New Mesozoic and Cenozoic fossils from Ecuador: Invertebrates, vertebrates, plants, and microfossils (United States)

    Cadena, Edwin A.; Mejia-Molina, Alejandra; Brito, Carla M.; Peñafiel, Sofia; Sanmartin, Kleber J.; Sarmiento, Luis B.


    Ecuador is well known for its extensive extant biodiversity, however, its paleobiodiversity is still poorly explored. Here we report seven new Mesozoic and Cenozoic fossil localities from the Pacific coast, inter-Andean depression and Napo basin of Ecuador, including vertebrates, invertebrates, plants, and microfossils. The first of these localities is called El Refugio, located near the small town of Chota, Imbabura Province, from where we report several morphotypes of fossil leaves and a mycetopodid freshwater mussel of the Upper Miocene Chota Formation. A second site is also located near the town of Chota, corresponding to potentially Pleistocene to Holocene lake deposits from which we report the occurrence of leaves and fossil diatoms. A third locality is at the Pacific coast of the country, near Rocafuerte, a town in Esmeraldas Province, from which we report a late Miocene palm leaf. We also report the first partially articulated skull with teeth from a Miocene scombridid (Mackerels) fish from El Cruce locality, and completely preserved seeds from La Pila locality, both sites from Manabí Province. Two late Cretaceous fossil sites from the Napo Province, one near Puerto Napo showing a good record of fossil shrimps and a second near the town of Loreto shows the occurrence of granular amber and small gymnosperms seeds and cuticles. All these new sites and fossils show the high potential of the sedimentary sequences and basins of Ecuador for paleontological studies and for a better understanding of the fossil record of the country and northern South America.

  19. Biogeography of speciation in Cenozoic marine ostracoda: the role of climatic change

    Energy Technology Data Exchange (ETDEWEB)

    Cronin, T.M.


    Evolutionary theory holds that geographic isolation of populations with its resultant reproductive isolation is an important factor in the origin of new species. Climatic change alters species' biogeography by creating and eliminating barriers that affect gene flow between populations. For benthic organisms such as shallow marine ostracodes, thermal gradients at biogeographic province boundaries and the area of continental shelf are factors affected by climatic and associated sea level changes. Studies of Cenozoic marine ostracodes show that allopatric speciation does not account for paleobiogeographic patterns of species subjected to climatic change. Studies of 127 endemic species from middle latitudes of the western Atlantic show that most speciation events in temperature and subtropical taxa are, in the zoogeographic sense, sympatric or parapatric-clinal and are induced by oceanographic changes related to climatic events rather than geographic isolation of populations. Most ostracode species in middle latitudes are adapted to frequent, cyclical climatic changes typical of these regions and originated during rare periods of major climatic transition. High-latitude arctic-subarctic genera such as Finmarchinella have circumpolar distributions. A parapatric-clinal model accounts for speciation patterns observed in some high-latitude and tropical taxa. However the dynamic nature of thermal gradients and species' biogeography during climatic change renders questionable the controversial distinction between parapatric and allopatric-peripatric speciation models.

  20. Age relationships and tectonic implications of late Cenozoic basaltic volcanism in Northland, New Zealand

    Energy Technology Data Exchange (ETDEWEB)

    Smith, I E.M. [Department of Geology, Auckland University, Auckland (New Zealand); Okada, T [Okayama University of Science, Hiruzen Research Institute, Okayama (Japan); Itaya, T [Okayama University of Science, Hiruzen Research Institute, Okayama (Japan); Black, P M [Department of Geology, Auckland University, Auckland (New Zealand)


    An episode of late Miocene-Recent essentially basaltic volcanism is the latest in a sequence of magmatic events recognised in the tectonically complex geological development of the Northland Peninsula. New K-Ar dates together with an extensive collection of new major and trace element chemical analyses prompt a reassessment of the significance of these late Cenozoic basalts. The main time/space groupings recognised are Tertiary volcanics in the Kaikohe-Bay of Islands, Puhipuhi, Ti Point, and Stony Batter areas and Quaternary basalts in the Kaikohe-Bay of Islands and Whangarei areas and at Tara. Basalts in the Kaikohe-Bay of Islands area are transitional to alkalic in character, while those in the south are transitional to tholeiitic, with the Ti Point and Stony Batter rocks being geochemically distinct. A consistent model for these observations is that the magmas originate from different levels of a layered mantle source in which the upper part carries a geochemical signature inherited from an earlier subduction event. (author). 27 refs., 7 figs., 1 tab.

  1. Three-dimensional geologic mapping of the Cenozoic basin fill, Amargosa Desert basin, Nevada and California (United States)

    Taylor, Emily M.; Sweetkind, Donald S.


    Understanding the subsurface geologic framework of the Cenozoic basin fill that underlies the Amargosa Desert in southern Nevada and southeastern California has been improved by using borehole data to construct three-dimensional lithologic and interpreted facies models. Lithologic data from 210 boreholes from a 20-kilometer (km) by 90-km area were reduced to a limited suite of descriptors based on geologic knowledge of the basin and distributed in three-dimensional space using interpolation methods. The resulting lithologic model of the Amargosa Desert basin portrays a complex system of interfingered coarse- to fine-grained alluvium, playa and palustrine deposits, eolian sands, and interbedded volcanic units. Lithologic units could not be represented in the model as a stacked stratigraphic sequence due to the complex interfingering of lithologic units and the absence of available time-stratigraphic markers. Instead, lithologic units were grouped into interpreted genetic classes, such as playa or alluvial fan, to create a three-dimensional model of the interpreted facies data. Three-dimensional facies models computed from these data portray the alluvial infilling of a tectonically formed basin with intermittent internal drainage and localized regional groundwater discharge. The lithologic and interpreted facies models compare favorably to resistivity, aeromagnetic, and geologic map data, lending confidence to the interpretation.

  2. Age relationships and tectonic implications of late Cenozoic basaltic volcanism in Northland, New Zealand

    International Nuclear Information System (INIS)

    Smith, I.E.M.; Okada, T.; Itaya, T.; Black, P.M.


    An episode of late Miocene-Recent essentially basaltic volcanism is the latest in a sequence of magmatic events recognised in the tectonically complex geological development of the Northland Peninsula. New K-Ar dates together with an extensive collection of new major and trace element chemical analyses prompt a reassessment of the significance of these late Cenozoic basalts. The main time/space groupings recognised are Tertiary volcanics in the Kaikohe-Bay of Islands, Puhipuhi, Ti Point, and Stony Batter areas and Quaternary basalts in the Kaikohe-Bay of Islands and Whangarei areas and at Tara. Basalts in the Kaikohe-Bay of Islands area are transitional to alkalic in character, while those in the south are transitional to tholeiitic, with the Ti Point and Stony Batter rocks being geochemically distinct. A consistent model for these observations is that the magmas originate from different levels of a layered mantle source in which the upper part carries a geochemical signature inherited from an earlier subduction event. (author). 27 refs., 7 figs., 1 tab

  3. Geobiological constraints on Earth system sensitivity to CO₂ during the Cretaceous and Cenozoic. (United States)

    Royer, D L; Pagani, M; Beerling, D J


    Earth system climate sensitivity (ESS) is the long-term (>10³ year) response of global surface temperature to doubled CO₂ that integrates fast and slow climate feedbacks. ESS has energy policy implications because global temperatures are not expected to decline appreciably for at least 10³ year, even if anthropogenic greenhouse gas emissions drop to zero. We report provisional ESS estimates of 3 °C or higher for some of the Cretaceous and Cenozoic based on paleo-reconstructions of CO₂ and temperature. These estimates are generally higher than climate sensitivities simulated from global climate models for the same ancient periods (approximately 3 °C). Climate models probably do not capture the full suite of positive climate feedbacks that amplify global temperatures during some globally warm periods, as well as other characteristic features of warm climates such as low meridional temperature gradients. These absent feedbacks may be related to clouds, trace greenhouse gases (GHGs), seasonal snow cover, and/or vegetation, especially in polar regions. Better characterization and quantification of these feedbacks is a priority given the current accumulation of atmospheric GHGs. © 2012 Blackwell Publishing Ltd.

  4. Preliminary geologic map of the late Cenozoic sediments of the western half of the Pasco Basin

    International Nuclear Information System (INIS)

    Lillie, J.T.; Tallman, A.M.; Caggiano, J.A.


    The U.S. Department of Energy, through the Basalt Waste Isolation Program within the Rockwell Hanford Operations, is investigating the feasibility of terminal storage of radioactive waste in deep caverns constructed in Columbia River Basalt. This report represents a portion of the geological work conducted during fiscal year 1978 to assess the geological conditions in the Pasco Basin. The surficial geology of the western half of the Pasco Basin was studied and mapped in a reconnaissance fashion at a scale of 1:62,500. The map was produced through a compilation of existing geologic mapping publications and additional field data collected during the spring of 1978. The map was produced primarily to: (1) complement other mapping work currently being conducted in the Pasco Basin and in the region by Rockwell Hanford Operations and its subcontractors; and, (2) to provide a framework for more detailed late Cenozoic studies within the Pasco Basin. A description of procedures used to produce the surficial geologic map and geologic map units is summarized in this report

  5. Unbiased cell quantification reveals a continued increase in the number of neocortical neurones during early post-natal development in mice

    DEFF Research Database (Denmark)

    Lyck, Lise; Krøigård, Thomas; Finsen, Bente


    The post-natal growth spurt of the mammalian neocortex has been attributed to maturation of dendritic arborizations, growth and myelination of axons, and addition of glia. It is unclear whether this growth may also involve recruitment of additional neurones. Using stereological methods, we analysed...... the number of neurones and glia in the neocortex during post-natal development in two separate strains of mice. Cell counting by the optical fractionator revealed that the number of neurones increased 80-100% from the time of birth to post-natal day (P)16, followed by a reduction by approximately 25...... was delayed until P16. The number of glia reached its maximum at P16, whereas the number of oligodendroglia, identified using a transgenic marker, increased until P55, the latest time of observation. Neurones continued to accumulate in the developing neocortex during the first 2 weeks of post...

  6. Detection of histone acetylation levels in the dorsal hippocampus reveals early tagging on specific residues of H2B and H4 histones in response to learning.

    Directory of Open Access Journals (Sweden)

    Olivier Bousiges

    Full Text Available The recent literature provides evidence that epigenetic mechanisms such as DNA methylation and histone modification are crucial to gene transcription linked to synaptic plasticity in the mammalian brain--notably in the hippocampus--and memory formation. We measured global histone acetylation levels in the rat hippocampus at an early stage of spatial or fear memory formation. We found that H3, H4 and H2B underwent differential acetylation at specific sites depending on whether rats had been exposed to the context of a task without having to learn or had to learn about a place or fear therein: H3K9K14 acetylation was mostly responsive to any experimental conditions compared to naive animals, whereas H2B N-terminus and H4K12 acetylations were mostly associated with memory for either spatial or fear learning. Altogether, these data suggest that behavior/experience-dependent changes differently regulate specific acetylation modifications of histones in the hippocampus, depending on whether a memory trace is established or not: tagging of H3K9K14 could be associated with perception/processing of testing-related manipulations and context, thereby enhancing chromatin accessibility, while tagging of H2B N-terminus tail and H4K12 could be more closely associated with the formation of memories requiring an engagement of the hippocampus.

  7. Fetal and early post-natal mineralization of the tympanic bulla in fin whales may reveal a Hitherto undiscovered evolutionary trait.

    Directory of Open Access Journals (Sweden)

    Bruno Cozzi

    Full Text Available The evolution of the cetacean skeleton followed a path that differentiated this group from other terrestrial mammals about 50 million years ago [1], and debate is still going on about the relationships between Cetacea and Artiodactyla [2], [3], [4]. Some skeletal traits of the basilosaurids (the more advanced forms of Archaeocetes, such as the expansion of the peribullary air sinuses, dental modification and vertebral size uniformity [5] are maintained and further emphasized also in contemporary odontocetes and mysticetes. Using Dual-Energy X-Ray Absorptiometry here we report that the deposition of bone mineral in fetal and newborn specimens of the fin whale Balaenoptera physalus is remarkably higher in the bulla tympanica than in the adjacent basal skull or in the rest of the skeleton. Ossification of the tympanic bulla in fetal Artiodactyla (bovine, hippopotamus is minimal, becomes sensible after birth and then progresses during growth, contrarily to the precocious mineralization that we observed in fin whales. Given the importance of the ear bones for the precise identification of phylogenetic relationship in therian evolution [6], this feature may indicate a specific evolutionary trait of fin whales and possibly other cetacean species or families. Early mineralization of the tympanic bulla allows immediate sound conduction in the aquatic medium and consequently holds potential importance for mother-calf relationship and postnatal survival.

  8. Proteomics Analysis Reveals Abnormal Electron Transport and Excessive Oxidative Stress Cause Mitochondrial Dysfunction in Placental Tissues of Early-Onset Preeclampsia. (United States)

    Xu, Zhongwei; Jin, Xiaohan; Cai, Wei; Zhou, Maobin; Shao, Ping; Yang, Zhen; Fu, Rong; Cao, Jin; Liu, Yan; Yu, Fang; Fan, Rong; Zhang, Yan; Zou, Shuang; Zhou, Xin; Yang, Ning; Chen, Xu; Li, Yuming


    Early-onset preeclampsia (EOS-PE) refers to preeclampsia that occurred before 34 gestation weeks. This study was conducted to explore the relationship between mitochondrial dysfunction and the pathogenesis of EOS-PE using proteomic strategy. To identify altering expressed mitochondrial proteins between severe EOS-PE and healthy pregnancies, enrichment of mitochondria coupled with iTRAQ-based quantitative proteomic method was performed. IHC and western blot were performed to detect the alteration of changing expression proteins, and confirmed the accuracy of proteomic results. We totally quantified 1372 proteins and screened 132 altering expressed mitochondrial proteins, including 86 down-regulated expression proteins and 46 up-regulated expression proteins (pelectron transport chain and oxidative phosphorylation. Especially, mitochondrial related molecules, PRDX2, PARK7, BNIP3, BCL2, PDHA1, SUCLG1, ACADM and NDUFV1, were involved in energy production process in the matrix and membrane of mitochondria. Our results showed that abnormal electron transport, excessive oxidative stress and mitochondrion disassembly might be the main cause of mitochondrial dysfunction, and was related to the pathogenesis of EOS-PE. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.


    International Nuclear Information System (INIS)

    Harra, Louise K.; Matthews, Sarah; Culhane, J. L.; Cheung, Mark C. M.; Kontar, Eduard P.; Hara, Hirohisa


    Non-thermal velocity measurements of the solar atmosphere, particularly from UV and X-ray emission lines have demonstrated over the decades that this parameter is important in understanding the triggering of solar flares. Enhancements have often been observed before intensity enhancements are seen. However, until the launch of Hinode, it has been difficult to determine the spatial location of the enhancements to better understand the source region. The Hinode EUV Imaging Spectrometer has the spectral and spatial resolution to allow us to probe the early stages of flares in detail. We analyze four events, all of which are GOES M- or X-classification flares, and all are located toward the limb for ease of flare geometry interpretation. Three of the flares were eruptive and one was confined. In all events, pre-flare enhancement in non-thermal velocity at the base of the active region and its surroundings has been found. These enhancements seem to be consistent with the footpoints of the dimming regions, and hence may be highlighting the activation of a coronal flux rope for the three eruptive events. In addition, pre-flare enhancements in non-thermal velocity were found above the looptops for the three eruptive events

  10. Molecular characterization of WFS1 in an Iranian family with Wolfram syndrome reveals a novel frameshift mutation associated with early symptoms. (United States)

    Sobhani, Maryam; Tabatabaiefar, Mohammad Amin; Rajab, Asadollah; Kajbafzadeh, Abdol-Mohammad; Noori-Daloii, Mohammad Reza


    Wolfram syndrome (WS) is a rare autosomal recessive neurodegenerative disorder that represents a likely source of childhood diabetes especially among countries in the consanguinity belt. The main responsible gene is WFS1 for which over one hundred mutations have been reported from different ethnic groups. The aim of this study was to identify the molecular etiology of WS and to perform a possible genotype-phenotype correlation in Iranian kindred. An Iranian family with two patients was clinically studied and WS was suspected. Genetic linkage analysis via 5 STR markers was carried out. For identification of mutations, DNA sequencing of WFS1 including all the exons, exon-intron boundaries and the promoter was performed. Linkage analysis indicated linkage to the WFS1 region. After DNA sequencing of WFS1, one novel pathogenic mutation, which causes frameshift alteration c.2177_2178insTCTTC (or c.2173_2177dupTCTTC) in exon eight, was found. The genotype-phenotype correlation analysis suggests that the presence of the homozygous mutation may be associated with early onset of disease symptoms. This study stresses the necessity of considering the molecular analysis of WFS1 in childhood diabetes with some symptoms of WS. © 2013 Elsevier B.V. All rights reserved.

  11. Evidence for Cenozoic extensional basin development and tectonic inversion south of the flat-slab segment, southern Central Andes, Chile (33° 36°S.L.) (United States)

    Charrier, R.; Baeza, O.; Elgueta, S.; Flynn, J. J.; Gans, P.; Kay, S. M.; Muñoz, N.; Wyss, A. R.; Zurita, E.


    The mainly volcanic Cenozoic deposits that make up much of the western part of the Principal Cordillera in Central Chile are generally subdivided into two major units: an older Abanico or Coya-Machalí Formation and a younger Farellones Formation. Difficulty in differentiating these units has led to considerable debate. On the basis of the wide distribution, great thickness, and presence of sedimentary intercalations, it has been postulated that these arc volcanics were deposited in an intermontane basin; more recently, it has been proposed that this basin developed under extensional conditions and underwent subsequent tectonic inversion. We present field, geochronologic, geochemical, and thermal maturity data that support the latter interpretation. Collectively, this new information clarifies the stratigraphic, tectonic, and paleogeographic evolution of these deposits. The vast geographic extent of the Abanico Formation and lateral equivalents, which reach from at least 32°30' to 44°S along the Principal Cordillera, its great thickness, and the presence of repeated thick fluvial and lacustrine intercalations all indicate deposition in a large, strongly subsident, and probably north-south oriented basin, developed between middle to late Eocene and Oligocene. The unconformable contact with underlying Mesozoic units observed at several localities indicates that deposition followed a substantial erosional episode during late Cretaceous and/or early Cenozoic time. Basal deposits of the Abanico Formation near Termas del Flaco increase rapidly in thickness to the west. Still further to the west, a thick Abanico section contains, in its upper part, mammal fossils older than those found in the basal deposits near Termas. This evidence indicates a major space of deposition west of this locality, which had been filled before deposition took place at Termas. The east-vergent, high-angle El Fierro thrust fault on the east side of the westward-growing deposits is interpreted

  12. Integrative testis transcriptome analysis reveals differentially expressed miRNAs and their mRNA targets during early puberty in Atlantic salmon. (United States)

    Skaftnesmo, K O; Edvardsen, R B; Furmanek, T; Crespo, D; Andersson, E; Kleppe, L; Taranger, G L; Bogerd, J; Schulz, R W; Wargelius, A


    Our understanding of the molecular mechanisms implementing pubertal maturation of the testis in vertebrates is incomplete. This topic is relevant in Atlantic salmon aquaculture, since precocious male puberty negatively impacts animal welfare and growth. We hypothesize that certain miRNAs modulate mRNAs relevant for the initiation of puberty. To explore which miRNAs regulate mRNAs during initiation of puberty in salmon, we performed an integrated transcriptome analysis (miRNA and mRNA-seq) of salmon testis at three stages of development: an immature, long-term quiescent stage, a prepubertal stage just before, and a pubertal stage just after the onset of single cell proliferation activity in the testis. Differentially expressed miRNAs clustered into 5 distinct expression profiles related to the immature, prepubertal and pubertal salmon testis. Potential mRNA targets of these miRNAs were predicted with miRmap and filtered for mRNAs displaying negatively correlated expression patterns. In summary, this analysis revealed miRNAs previously known to be regulated in immature vertebrate testis (miR-101, miR-137, miR-92b, miR-18a, miR-20a), but also miRNAs first reported here as regulated in the testis (miR-new289, miR-30c, miR-724, miR-26b, miR-new271, miR-217, miR-216a, miR-135a, miR-new194 and the novel predicted n268). By KEGG enrichment analysis, progesterone signaling and cell cycle pathway genes were found regulated by these differentially expressed miRNAs. During the transition into puberty we found differential expression of miRNAs previously associated (let7a/b/c), or newly associated (miR-15c, miR-2184, miR-145 and the novel predicted n7a and b) with this stage. KEGG enrichment analysis revealed that mRNAs of the Wnt, Hedgehog and Apelin signaling pathways were potential regulated targets during the transition into puberty. Likewise, several regulated miRNAs in the pubertal stage had earlier been associated (miR-20a, miR-25, miR-181a, miR-202, let7c/d/a, miR-125b

  13. Kinematics and 40Ar/ 39Ar geochronology of the Gaoligong and Chongshan shear systems, western Yunnan, China: Implications for early Oligocene tectonic extrusion of SE Asia (United States)

    Wang, Yuejun; Fan, Weiming; Zhang, Yanhua; Peng, Touping; Chen, Xinyue; Xu, Yigang


    The Gaoligong and Chongshan shear systems (GLSS and CSSS) in western Yunnan, China, have similar tectonic significance to the Ailaoshan-Red River shear system (ASRRSS) during the Cenozoic tectonic development of the southeastern Tibetan syntaxis. To better understand their kinematics and the Cenozoic tectonic evolution of SE Asia, this paper presents new kinematic and 40Ar/ 39Ar geochronological data for these shear systems. All the structural and microstructural evidence indicate that the GLSS is a dextral strike-slip shear system while the CSSS is a sinistral strike-slip shear system, and both were developed under amphibolite- to greenschist-grade conditions. The 40Ar/ 39Ar dating of synkinematic minerals revealed that the strike-slip shearing on the GLSS and CSSS at least began at ˜ 32 Ma, possibly coeval with the onset of other major shear systems in SE Asia. The late-stage shearing on the GLSS and CSSS is dated at ˜ 27-29 Ma by the biotite 40Ar/ 39Ar ages, consistent with that of the Wang Chao shear zone (WCSZ), but ˜ 10 Ma earlier than that of the ASRRSS. The dextral Gaoligong shear zone within the GLSS may have separated the India plate from the Indochina Block during early Oligocene. Combined with other data in western Yunnan, we propose that the Baoshan/Southern Indochina Block escaped faster southeastward along the CSSS to the east and the GLSS to the west than the Northern Indochina Block along the ASRRSS, accompanying with the obliquely northward motion of the India plate during early Oligocene (28-36 Ma). During 28-17 Ma, the Northern Indochina Block was rotationally extruded along the ASRRSS relative to the South China Block as a result of continuously impinging of the India plate.

  14. High-Throughput Genetic Screen Reveals that Early Attachment and Biofilm Formation Are Necessary for Full Pyoverdine Production by Pseudomonas aeruginosa

    Directory of Open Access Journals (Sweden)

    Donghoon Kang


    Full Text Available Pseudomonas aeruginosa is a re-emerging, multidrug-resistant, opportunistic pathogen that threatens the lives of immunocompromised patients, patients with cystic fibrosis, and those in critical care units. One of the most important virulence factors in this pathogen is the siderophore pyoverdine. Pyoverdine serves several critical roles during infection. Due to its extremely high affinity for ferric iron, pyoverdine gives the pathogen a significant advantage over the host in their competition for iron. In addition, pyoverdine can regulate the production of multiple bacterial virulence factors and perturb host mitochondrial homeostasis. Inhibition of pyoverdine biosynthesis decreases P. aeruginosa pathogenicity in multiple host models. To better understand the regulation of pyoverdine production, we developed a high-throughput genetic screen that uses the innate fluorescence of pyoverdine to identify genes necessary for its biosynthesis. A substantial number of hits showing severe impairment of pyoverdine production were in genes responsible for early attachment and biofilm formation. In addition to genetic disruption of biofilm, both physical and chemical perturbations also attenuated pyoverdine production. This regulatory relationship between pyoverdine and biofilm is particularly significant in the context of P. aeruginosa multidrug resistance, where the formation of biofilm is a key mechanism preventing access to antimicrobials and the immune system. Furthermore, we demonstrate that the biofilm inhibitor 2-amino-5,6-dimethylbenzimidazole effectively attenuates pyoverdine production and rescues Caenorhabditis elegans from P. aeruginosa-mediated pathogenesis. Our findings suggest that targeting biofilm formation in P. aeruginosa infections may have multiple therapeutic benefits and that employing an unbiased, systems biology-based approach may be useful for understanding the regulation of specific virulence factors and identifying novel anti

  15. Spatiotemporal analysis of putative notochordal cell markers reveals CD24 and keratins 8, 18, and 19 as notochord-specific markers during early human intervertebral disc development. (United States)

    Rodrigues-Pinto, Ricardo; Berry, Andrew; Piper-Hanley, Karen; Hanley, Neil; Richardson, Stephen M; Hoyland, Judith A


    In humans, the nucleus pulposus (NP) is composed of large vacuolated notochordal cells in the fetus but, soon after birth, becomes populated by smaller, chondrocyte-like cells. Although animal studies indicate that notochord-derived cells persist in the adult NP, the ontogeny of the adult human NP cell population is still unclear. As such, identification of unique notochordal markers is required. This study was conducted to determine the spatiotemporal expression of putative human notochordal markers to aid in the elucidation of the ontogeny of adult human NP cells. Human embryos and fetuses (3.5-18 weeks post-conception (WPC)) were microdissected to isolate the spine anlagens (notochord and somites/sclerotome). Morphology of the developing IVD was assessed using hematoxylin and eosin. Expression of keratin (KRT) 8, KRT18, KRT19, CD24, GAL3, CD55, BASP1, CTGF, T, CD90, Tie2, and E-cadherin was assessed using immunohistochemistry. KRT8, KRT18, KRT19 were uniquely expressed by notochordal cells at all spine levels at all stages studied; CD24 was expressed at all stages except 3.5 WPC. While GAL3, CD55, BASP1, CTGF, and T were expressed by notochordal cells at specific stages, they were also co-expressed by sclerotomal cells. CD90, Tie2, and E-cadherin expression was not detectable in developing human spine cells at any stage. This study has identified, for the first time, the consistent expression of KRT8, KRT18, KRT19, and CD24 as human notochord-specific markers during early IVD development. Thus, we propose that these markers can be used to help ascertain the ontogeny of adult human NP cells. © 2016 The Authors. Journal of Orthopaedic Research Published by Wiley Periodicals, Inc. J Orthop Res 34:1327-1340, 2016. © 2016 The Authors. Journal of Orthopaedic Research Published by Wiley Periodicals, Inc.

  16. Spatiotemporal analysis of putative notochordal cell markers reveals CD24 and keratins 8, 18, and 19 as notochord‐specific markers during early human intervertebral disc development (United States)

    Rodrigues‐Pinto, Ricardo; Berry, Andrew; Piper‐Hanley, Karen; Hanley, Neil; Richardson, Stephen M.


    ABSTRACT In humans, the nucleus pulposus (NP) is composed of large vacuolated notochordal cells in the fetus but, soon after birth, becomes populated by smaller, chondrocyte‐like cells. Although animal studies indicate that notochord‐derived cells persist in the adult NP, the ontogeny of the adult human NP cell population is still unclear. As such, identification of unique notochordal markers is required. This study was conducted to determine the spatiotemporal expression of putative human notochordal markers to aid in the elucidation of the ontogeny of adult human NP cells. Human embryos and fetuses (3.5–18 weeks post‐conception (WPC)) were microdissected to isolate the spine anlagens (notochord and somites/sclerotome). Morphology of the developing IVD was assessed using hematoxylin and eosin. Expression of keratin (KRT) 8, KRT18, KRT19, CD24, GAL3, CD55, BASP1, CTGF, T, CD90, Tie2, and E‐cadherin was assessed using immunohistochemistry. KRT8, KRT18, KRT19 were uniquely expressed by notochordal cells at all spine levels at all stages studied; CD24 was expressed at all stages except 3.5 WPC. While GAL3, CD55, BASP1, CTGF, and T were expressed by notochordal cells at specific stages, they were also co‐expressed by sclerotomal cells. CD90, Tie2, and E‐cadherin expression was not detectable in developing human spine cells at any stage. This study has identified, for the first time, the consistent expression of KRT8, KRT18, KRT19, and CD24 as human notochord‐specific markers during early IVD development. Thus, we propose that these markers can be used to help ascertain the ontogeny of adult human NP cells. © 2016 The Authors. Journal of Orthopaedic Research Published by Wiley Periodicals, Inc. J Orthop Res 34:1327–1340, 2016. PMID:26910849

  17. Unsupervised Analysis of Array Comparative Genomic Hybridization Data from Early-Onset Colorectal Cancer Reveals Equivalence with Molecular Classification and Phenotypes

    Directory of Open Access Journals (Sweden)

    María Arriba


    Full Text Available AIM: To investigate whether chromosomal instability (CIN is associated with tumor phenotypes and/or with global genomic status based on MSI (microsatellite instability and CIMP (CpG island methylator phenotype in early-onset colorectal cancer (EOCRC. METHODS: Taking as a starting point our previous work in which tumors from 60 EOCRC cases (≤45 years at the time of diagnosis were analyzed by array comparative genomic hybridization (aCGH, in the present study we performed an unsupervised hierarchical clustering analysis of those aCGH data in order to unveil possible associations between the CIN profile and the clinical features of the tumors. In addition, we evaluated the MSI and the CIMP statuses of the samples with the aim of investigating a possible relationship between copy number alterations (CNAs and the MSI/CIMP condition in EOCRC. RESULTS: Based on the similarity of the CNAs detected, the unsupervised analysis stratified samples into two main clusters (A, B and four secondary clusters (A1, A2, B3, B4. The different subgroups showed a certain correspondence with the molecular classification of colorectal cancer (CRC, which enabled us to outline an algorithm to categorize tumors according to their CIMP status. Interestingly, each subcluster showed some distinctive clinicopathological features. But more interestingly, the CIN of each subcluster mainly affected particular chromosomes, allowing us to define chromosomal regions more specifically affected depending on the CIMP/MSI status of the samples. CONCLUSIONS: Our findings may provide a basis for a new form of classifying EOCRC according to the genomic status of the tumors.

  18. Dual pulse-chase microscopy reveals early divergence in the biosynthetic trafficking of the Na,K-ATPase and E-cadherin (United States)

    Farr, Glen A.; Hull, Michael; Stoops, Emily H.; Bateson, Rosalie; Caplan, Michael J.


    Recent evidence indicates that newly synthesized membrane proteins that share the same distributions in the plasma membranes of polarized epithelial cells can pursue a variety of distinct trafficking routes as they travel from the Golgi complex to their common destination at the cell surface. In most polarized epithelial cells, both the Na,K-ATPase and E-cadherin are localized to the basolateral domains of the plasma membrane. To examine the itineraries pursued by newly synthesized Na,K-ATPase and E-cadherin in polarized MDCK epithelial cells, we used the SNAP and CLIP labeling systems to fluorescently tag temporally defined cohorts of these proteins and observe their behaviors simultaneously as they traverse the secretory pathway. These experiments reveal that E-cadherin is delivered to the cell surface substantially faster than is the Na,K-ATPase. Furthermore, the surface delivery of newly synthesized E-cadherin to the plasma membrane was not prevented by the 19°C temperature block that inhibits the trafficking of most proteins, including the Na,K-ATPase, out of the trans-Golgi network. Consistent with these distinct behaviors, populations of newly synthesized E-cadherin and Na,K-ATPase become separated from one another within the trans-Golgi network, suggesting that they are sorted into different carrier vesicles that mediate their post-Golgi trafficking. PMID:26424804

  19. Early Cenozoic rapid flight enigma of the Indian subcontinent resolved: Roles of topographic top loading and subcrustal erosion

    Directory of Open Access Journals (Sweden)

    Muthuvairavasamy Ramkumar


    Full Text Available Intrinsic magmatic processes are considered as critical operators of plate movements. Here we demonstrate the role of extrinsic processes consequent to intrinsic processes as a catalyst for anomalous rapid plate movement. The rapid and accelerated flight of the Indian subcontinent since Deccan volcanism until its collision with Eurasia remains as one of the geological conundrums. Data on seismic tomography, peninsular geomorphology and inferences on continuum of subcrustal structures are utilized to address this enigma. We propose geomorphic isostasy as the mechanism that has driven this fastest drift ever recorded in geological history. It was initiated by sudden instability after the Deccan volcanism and resultant extensive accumulation of lava pile over continental lithosphere of northern India, northern-eastern tilt due to crustal thickness heterogeneity and subcrustal thermal stratification. The drift was sustained by Carlsberg and Central Indian ridge-push until collision and sediment top loading at northeast thenceforth. These inferences and geomorphic isostasy as a catalytic mechanism necessitate variability of drift rates as integral inputs for any continental scale modeling.

  20. Geodynamic controls on the contamination of Cenozoic arc magmas in the southern Central Andes: Insights from the O and Hf isotopic composition of zircon (United States)

    Jones, Rosemary E.; Kirstein, Linda A.; Kasemann, Simone A.; Dhuime, Bruno; Elliott, Tim; Litvak, Vanesa D.; Alonso, Ricardo; Hinton, Richard


    Subduction zones, such as the Andean convergent margin of South America, are sites of active continental growth and crustal recycling. The composition of arc magmas, and therefore new continental crust, reflects variable contributions from mantle, crustal and subducted reservoirs. Temporal (Ma) and spatial (km) variations in these contributions to southern Central Andean arc magmas are investigated in relation to the changing plate geometry and geodynamic setting of the southern Central Andes (28-32° S) during the Cenozoic. The in-situ analysis of O and Hf isotopes in zircon, from both intrusive (granitoids) and extrusive (basaltic andesites to rhyolites) Late Cretaceous - Late Miocene arc magmatic rocks, combined with high resolution U-Pb dating, demonstrates distinct across-arc variations. Mantle-like δ18O(zircon) values (+5.4‰ to +5.7‰ (±0.4 (2σ))) and juvenile initial εHf(zircon) values (+8.3 (±0.8 (2σ)) to +10.0 (±0.9 (2σ))), combined with a lack of zircon inheritance suggests that the Late Cretaceous (∼73 Ma) to Eocene (∼39 Ma) granitoids emplaced in the Principal Cordillera of Chile formed from mantle-derived melts with very limited interaction with continental crustal material, therefore representing a sustained period of upper crustal growth. Late Eocene (∼36 Ma) to Early Miocene (∼17 Ma) volcanic arc rocks present in the Frontal Cordillera have 'mantle-like' δ18O(zircon) values (+4.8‰ (±0.2 (2σ) to +5.8‰ (±0.5 (2σ))), but less radiogenic initial εHf(zircon) values (+1.0 (±1.1 (2σ)) to +4.0 (±0.6 (2σ))) providing evidence for mixing of mantle-derived melts with the Late Paleozoic - Early Mesozoic basement (up to ∼20%). The assimilation of both Late Paleozoic - Early Mesozoic Andean crust and a Grenville-aged basement is required to produce the higher than 'mantle-like' δ18O(zircon) values (+5.5‰ (±0.6 (2σ) to +7.2‰ (±0.4 (2σ))) and unradiogenic, initial εHf(zircon) values (-3.9 (±1.0 (2σ)) to +1.6 (±4.4 (2

  1. Unveiling the diversification dynamics of Australasian predaceous diving beetles in the Cenozoic. (United States)

    Toussaint, Emmanuel F A; Condamine, Fabien L; Hawlitschek, Oliver; Watts, Chris H; Porch, Nick; Hendrich, Lars; Balke, Michael


    During the Cenozoic, Australia experienced major climatic shifts that have had dramatic ecological consequences for the modern biota. Mesic tropical ecosystems were progressively restricted to the coasts and replaced by arid-adapted floral and faunal communities. Whilst the role of aridification has been investigated in a wide range of terrestrial lineages, the response of freshwater clades remains poorly investigated. To gain insights into the diversification processes underlying a freshwater radiation, we studied the evolutionary history of the Australasian predaceous diving beetles of the tribe Hydroporini (147 described species). We used an integrative approach including the latest methods in phylogenetics, divergence time estimation, ancestral character state reconstruction, and likelihood-based methods of diversification rate estimation. Phylogenies and dating analyses were reconstructed with molecular data from seven genes (mitochondrial and nuclear) for 117 species (plus 12 outgroups). Robust and well-resolved phylogenies indicate a late Oligocene origin of Australasian Hydroporini. Biogeographic analyses suggest an origin in the East Coast region of Australia, and a dynamic biogeographic scenario implying dispersal events. The group successfully colonized the tropical coastal regions carved by a rampant desertification, and also colonized groundwater ecosystems in Central Australia. Diversification rate analyses suggest that the ongoing aridification of Australia initiated in the Miocene contributed to a major wave of extinctions since the late Pliocene probably attributable to an increasing aridity, range contractions and seasonally disruptions resulting from Quaternary climatic changes. When comparing subterranean and epigean genera, our results show that contrasting mechanisms drove their diversification and therefore current diversity pattern. The Australasian Hydroporini radiation reflects a combination of processes that promoted both diversification

  2. Cenozoic climate change shaped the evolutionary ecophysiology of the Cupressaceae conifers. (United States)

    Pittermann, Jarmila; Stuart, Stephanie A; Dawson, Todd E; Moreau, Astrid


    The Cupressaceae clade has the broadest diversity in habitat and morphology of any conifer family. This clade is characterized by highly divergent physiological strategies, with deciduous swamp-adapted genera-like Taxodium at one extreme, and evergreen desert genera-like Cupressus at the other. The size disparity within the Cupressaceae is equally impressive, with members ranging from 5-m-tall juniper shrubs to 100-m-tall redwood trees. Phylogenetic studies demonstrate that despite this variation, these taxa all share a single common ancestor; by extension, they also share a common ancestral habitat. Here, we use a common-garden approach to compare xylem and leaf-level physiology in this family. We then apply comparative phylogenetic methods to infer how Cenozoic climatic change shaped the morphological and physiological differences between modern-day members of the Cupressaceae. Our data show that drought-resistant crown clades (the Cupressoid and Callitroid clades) most likely evolved from drought-intolerant Mesozoic ancestors, and that this pattern is consistent with proposed shifts in post-Eocene paleoclimates. We also provide evidence that within the Cupressaceae, the evolution of drought-resistant xylem is coupled to increased carbon investment in xylem tissue, reduced xylem transport efficiency, and at the leaf level, reduced photosynthetic capacity. Phylogenetically based analyses suggest that the ancestors of the Cupressaceae were dependent upon moist habitats, and that drought-resistant physiology developed along with increasing habitat aridity from the Oligocene onward. We conclude that the modern biogeography of the Cupressaceae conifers was shaped in large part by their capacity to adapt to drought.

  3. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons (United States)

    Pavlis, T. L.; Miller, M.; Serpa, L.


    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  4. A novel comparative pattern count analysis reveals a chronic ethanol-induced dynamic shift in immediate early NF-κB genome-wide promoter binding during liver regeneration. (United States)

    Kuttippurathu, Lakshmi; Patra, Biswanath; Hoek, Jan B; Vadigepalli, Rajanikanth


    Liver regeneration after partial hepatectomy is a clinically important process that is impaired by adaptation to chronic alcohol intake. We focused on the initial time points following partial hepatectomy (PHx) to analyze the genome-wide binding activity of NF-κB, a key immediate early regulator. We investigated the effect of chronic alcohol intake on immediate early NF-κB genome-wide localization, in the adapted state as well as in response to partial hepatectomy, using chromatin immunoprecipitation followed by promoter microarray analysis. We found many ethanol-specific NF-κB binding target promoters in the ethanol-adapted state, corresponding to the regulation of biosynthetic processes, oxidation-reduction and apoptosis. Partial hepatectomy induced a diet-independent shift in NF-κB binding loci relative to the transcription start sites. We employed a novel pattern count analysis to exhaustively enumerate and compare the number of promoters corresponding to the temporal binding patterns in ethanol and pair-fed control groups. The highest pattern count corresponded to promoters with NF-κB binding exclusively in the ethanol group at 1 h post PHx. This set was associated with the regulation of cell death, response to oxidative stress, histone modification, mitochondrial function, and metabolic processes. Integration with the global gene expression profiles to identify putative transcriptional consequences of NF-κB binding patterns revealed that several of ethanol-specific 1 h binding targets showed ethanol-specific differential expression through 6 h post PHx. Motif analysis yielded co-incident binding loci for STAT3, AP-1, CREB, C/EBP-β, PPAR-γ and C/EBP-α, likely participating in co-regulatory modules with NF-κB in shaping the immediate early response to PHx. We conclude that adaptation to chronic ethanol intake disrupts the NF-κB promoter binding landscape with consequences for the immediate early gene regulatory response to the acute challenge of PHx.

  5. Continental deformation accommodated by non-rigid passive bookshelf faulting: An example from the Cenozoic tectonic development of northern Tibet (United States)

    Zuza, Andrew V.; Yin, An


    Collision-induced continental deformation commonly involves complex interactions between strike-slip faulting and off-fault deformation, yet this relationship has rarely been quantified. In northern Tibet, Cenozoic deformation is expressed by the development of the > 1000-km-long east-striking left-slip Kunlun, Qinling, and Haiyuan faults. Each have a maximum slip in the central fault segment exceeding 10s to ~ 100 km but a much smaller slip magnitude (~bookshelf-fault model for the Cenozoic tectonic development of northern Tibet. Our model, quantitatively relating discrete left-slip faulting to distributed off-fault deformation during regional clockwise rotation, explains several puzzling features, including the: (1) clockwise rotation of east-striking left-slip faults against the northeast-striking left-slip Altyn Tagh fault along the northwestern margin of the Tibetan Plateau, (2) alternating fault-parallel extension and shortening in the off-fault regions, and (3) eastward-tapering map-view geometries of the Qimen Tagh, Qaidam, and Qilian Shan thrust belts that link with the three major left-slip faults in northern Tibet. We refer to this specific non-rigid bookshelf-fault system as a passive bookshelf-fault system because the rotating bookshelf panels are detached from the rigid bounding domains. As a consequence, the wallrock of the strike-slip faults deforms to accommodate both the clockwise rotation of the left-slip faults and off-fault strain that arises at the fault ends. An important implication of our model is that the style and magnitude of Cenozoic deformation in northern Tibet vary considerably in the east-west direction. Thus, any single north-south cross section and its kinematic reconstruction through the region do not properly quantify the complex deformational processes of plateau formation.

  6. Cenozoic structural evolution of the southwestern Bükk Mts. and the southern part of the Darnó Deformation Belt (NE Hungary

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    Petrik Attila


    Full Text Available Extensive structural field observations and seismic interpretation allowed us to delineate 7 deformation phases in the study area for the Cenozoic period. Phase D1 indicates NW–SE compression and perpendicular extension in the Late Oligocene–early Eggenburgian and it was responsible for the development of a wedge-shaped Paleogene sequence in front of north-westward propagating blind reverse faults. D2 is represented by E–W compression and perpendicular extension in the middle Eggenburgian–early Ottnangian. The D1 and D2 phases resulted in the erosion of Paleogene suites on elevated highs. Phase D2 was followed by a counterclockwise rotation, described in earlier publications. When considering the age of sediments deformed by the syn-sedimentary D3 deformation and preliminary geochronological ages of deformed volcanites the time of the first CCW rotation can be shifted slightly younger (~17–16.5 Ma than previously thought (18.5–17.5 Ma. Another consequence of our new timing is that the extrusional tectonics of the ALCAPA unit, the D2 local phase, could also terminate somewhat later by 1 Myr. D4 shows NE–SW extension in the late Karpatian–Early Badenian creating NW–SE trending normal faults which connected the major NNE–SSW trending sinistral faults. The D5 and D6 phases are late syn-rift deformations indicating E–W extension and NW–SE extension, respectively. D5 indicates syn-sedimentary deformation in the Middle Badenian–early Sarmatian and caused the synsedimentary thickening of mid-Miocene suites along NNE–SSW trending transtensional faults. D5 postdates the second CCW rotation which can be bracketed between ~16–15 Ma. This timing is somewhat older than previously considered and is based on new geochronological dates of pyroclastite rocks which were not deformed by this phase. D6 was responsible for further deepening of half-grabens during the Sarmatian. D7 is post-tilt NNW–SSE extension and induced the

  7. Gravity and magnetic survey of the Oaxaca city region: Cenozoic horst-and-graben structure superimposed on the Oaxaca-Juarez terrane boundary, southern Mexico (United States)

    Campos-Enríquez, J. O.; Belmonte-Jiménez, S. I.; Keppie, J. D.; Ortega-Gutiérrez, F.; Arzate, J. A.; Martínez-Silva, J.; Martínez-Serrano, R. G.


    A geophysical survey of the Oaxaca Fault along the north-trending Etla and Zaachila valleys area, southern Mexico, shows a series of NNW-SSE Bouguer and magnetic anomalies with steeper gradients towards the east. The Oaxaca Fault represents Tertiary extensional reactivation of the Juarez shear zone that constitutes the boundary between the Oaxaca and Juárez terranes. Cooperative interpretation of six combined gravity and magnetic NE-SW profiles perpendicular to the valleys indicates the presence of a composite depression comprising three N-S sub-basins: the northern Etla and southern Zaachila sub-basins separated by the Atzompa sub-basin. The Etla sub-basin is bounded by the moderately E-dipping, Etla Fault and the more steeply W-dipping Oaxaca Fault, which together constitute a graben that continues southwards into the Atzompa graben. The deeper Zaachila sub-basin, south of Oaxaca city, is a wide V-shaped graben with a horst in the middle. The new geophysical data suggest that the Oaxaca-Juarez terrane boundary is displaced sinistrally ca. 20 km along the E-W Donají Fault, which defines the northern boundary of the Zaachila sub-basin. On the other hand, the Oaxaca Fault may either continue unbroken southwards along the western margin of the horst in the Zaachila sub-basin or be offset along with the terrane boundary. The sinistral movement may have taken place either during the Late Mesozoic-Early Cenozoic, Laramide Orogeny as a lateral ramp in the thrust plane or under Miocene-Pliocene, NE-SW extension. The former suggests that the Donají Fault is a transcurrent fault, whereas the latter implies that it is a transfer fault. The models imply that originally the suture was continuous south of the Donaji Fault and provide a constraint for the accretion of the Oaxaca and Juarez terranes.

  8. Cenozoic sedimentation and exhumation of the foreland basin system preserved in the Precordillera thrust belt (31-32°S), southern central Andes, Argentina (United States)

    Levina, Mariya; Horton, Brian K.; Fuentes, Facundo; Stockli, Daniel F.


    Andean retroarc compression associated with subduction and shallowing of the oceanic Nazca plate resulted in thin-skinned thrusting that partitioned and uplifted Cenozoic foreland basin fill in the Precordillera of west-central Argentina. Evolution of the central segment of the Precordillera fold-thrust belt is informed by new analyses of clastic nonmarine deposits now preserved in three intermontane regions between major east directed thrust faults. We focus on uppermost Oligocene-Miocene basin fill in the axial to frontal Precordillera at 31-32°S along the Río San Juan (Albarracín and Pachaco sections) and the flank of one of the leading thrust structures (Talacasto section). The three successions record hinterland construction of the Frontal Cordillera, regional arc volcanism, and initial exhumation of Precordillera thrust sheets. Provenance changes recorded by detrital zircon U-Pb age populations suggest that initial shortening in the Frontal Cordillera coincided with an early Miocene shift from eolian to fluvial accumulation in the adjacent foreland basin. Upward coarsening of fluvial deposits and increased proportions of Paleozoic clasts reflect cratonward (eastward) advance of deformation into the Precordillera and resultant structural fragmentation of the foreland basin into isolated intermontane segments. Apatite (U-Th)/He thermochronometry of basin fill constrains to 12-9 Ma the most probable age of uplift-induced exhumation and cooling of Precordillera thrust sheets. This apparent pulse of exhumation is evident in each succession, suggestive of rapid, large-scale exhumation by synchronous thrusting above a single décollement linking major structures of the Precordillera.

  9. New insights into the distribution and evolution of the Cenozoic Tan-Lu Fault Zone in the Liaohe sub-basin of the Bohai Bay Basin, eastern China (United States)

    Huang, Lei; Liu, Chi-yang; Xu, Chang-gui; Wu, Kui; Wang, Guang-yuan; Jia, Nan


    As the largest strike-slip fault system in eastern China, the northeast-trending Tan-Lu Fault Zone (TLFZ) is a significant tectonic element contributing to the Mesozoic-Cenozoic regional geologic evolution of eastern Asia, as well as to the formation of ore deposits and oilfields. Because of the paucity of data, its distribution and evolutionary history in the offshore Liaohe sub-basin of the northern Bohai Bay Basin (BBB) are still poorly understood. Investigations of the strike-slip fault system in the western portion of the offshore Liaohe sub-basin via new seismic data provide us with new insights into the characteristics of the Cenozoic TLFZ. Results of this study show that Cenozoic dextral strike-slip faults occurred near the center of the Liaoxi graben in the offshore Liaohe sub-basin; these strike-slip faults connect with their counterparts to the north, the western part of the onshore Liaohe sub-basin, and have similar characteristics to those in other areas of the BBB in terms of kinematics, evolutionary history, and distribution; consequently, these faults are considered as the western branch of the TLFZ. All strike-slip faults within the Liaoxi graben merge at depth with a central subvertical basement fault induced by the reactivation of a pre-existing strike-slip basement fault, the pre-Cenozoic TLFZ. Data suggest that the TLFZ across the whole Liaohe sub-basin comprises two branches and that the Cenozoic distribution of this system was inherited from the pre-Cenozoic TLFZ. This characteristic distribution might be possessed by the whole TLFZ, thus the new understandings about the distribution and evolutionary model of the TLFZ in this study can be inferred in many research fields along the whole fault zone, such as regional geology, ore deposits, petroleum exploration and earthquake hazard.

  10. Geochemical insights into the lithology of mantle sources for Cenozoic alkali basalts in West Qinling, China (United States)

    Dai, Li-Qun; Zheng, Fei; Zhao, Zi-Fu; Zheng, Yong-Fei


    Although alkali basalts are common in oceanic islands and continental rifts, the lithology of their mantle sources is still controversial. While the peridotite is usually viewed as a common source lithology, there are increasing studies suggesting significant contributions from ultramafic metasomatites such as carbonated peridotite, pyroxenite and hornblendite to the origin of alkali basalts. The present study indicates that carbonated peridotite plus hornblendite would have served as the mantle sources of Cenozoic alkali basalts from the West Qinling orogen in China. The target basalts show low SiO2 contents of 36.9 to 40.8 wt% and highly variable Na2O + K2O contents from 0.86 to 4.77 wt%, but high CaO contents of 12.5 to 16.3 wt% and CaO/Al2O3 ratios of 1.42 to 2.19. They are highly enriched in the majority of incompatible trace elements, but depleted in Rb, K, Pb, Zr, Hf, and Ti. Furthermore, they exhibit high (La/Yb)N, Zr/Hf, Ce/Pb and Nb/Ta ratios, but low Ti/Eu and Hf/Sm ratios. Generally, with increasing (La/Yb)N and CaO/Al2O3 ratios, their Ti/Eu and Hf/Sm ratios decrease whereas their Zr/Hf, Ce/Pb and Nb/Ta ratios increase. These major and trace element features are similar to those of carbonatites and hornblendite-derived melts to some extent, but significantly different from those of mid-ocean ridge basalts (MORB). This suggests that the alkali basalts would be originated from metasomatic mantle sources. A comparison of the major-trace elements in the alkali basalts with those of some representative mantle-derived melts indicates that the source lithology of alkali basalts is a kind of ultramafic metasomatites that are composed of carbonated peridotite and hornblendite. Such metasomatites would be generated by reaction of the depleted MORB mantle peridotite with hydrous, carbonate-bearing felsic melts derived from partial melting of the subducted Paleotethyan oceanic crust. Therefore, the melt-peridotite reaction at the slab-mantle interface in the

  11. Brittle reactivation of mylonitic fabric and the origin of the Cenozoic Rio Santana Graben, southeastern Brazil (United States)

    Gontijo-Pascutti, Ambrosina; Bezerra, Francisco H. R.; Terra, Emanuele La; Almeida, Julio C. H.


    In the Ribeira belt, southeastern Brazil, the Precambrian mylonitic fabric mainly formed during the Brasiliano/Pan-African orogeny (640-480 Ma) and was reactivated as fault zones in the Cretaceous and Cenozoic. The reactivation process led to the development of the System of Continental Rifts of southeastern Brazil, from the Paleogene to the Quaternary. We investigated the brittle reactivation of a mylonitic zone, which is part of a major mylonitic belt, Arcádia-Areal. We used geological and geomorphological mapping, resistivity survey, controlled source audiomagnetotelluric survey, and luminescence dating. Our results indicate that this shear zone was reactivated and formed a 15 km long and 2 km wide sedimentary-filled trough, the Rio Santana Graben. It is located on the northwest border of a major structure, the Guanabara Graben, in the State of Rio de Janeiro. The Rio Santana Graben forms an almost entirely fault-bounded, NE-elongated depression that was accommodated entirely within the Arcádia-Areal shear zone. The graben consists of two main depocenters separated by a relay ramp. The graben formed by means of multistage activity of several faults during at least two main periods. The first period formed silicified fault breccia and occurred during alkaline magmatism in the Paleogene. The second formed fault breccia and gouge in shallow conditions and occurred at least until the Quaternary. The NE-trending and NW-dipping Precambrian fabric was reactivated as dip-slip and strike-slip faults. These faults triggered clastic-sediment deposition at least 300 m thick. The upper part of the graben consists of Quaternary alluvial and colluvial sediment fill, which yielded maximum luminescence deposition ages from 49 to 13 ka in the center of the trough. An organic layer at the top of the Quaternary alluvial deposits yielded 14C ages at ˜6000 years BP. The lower part of the graben may be composed of Paleogene to Neogene sedimentary deposits, which occur in other

  12. The Subduction of an Exhumed and Serpentinized Magma-Poor Basement Beneath the Northern Lesser Antilles Reveals the Early Tectonic Fabric at Slow-Spreading Mid-Oceanic Ridges (United States)

    Marcaillou, B.; Klingelhoefer, F.; Laurencin, M.; Biari, Y.; Graindorge, D.; Jean-Frederic, L.; Laigle, M.; Lallemand, S.


    Multichannel and wide-angle seismic data as well as heat-flow measurements (ANTITHESIS cruise, 2016) reveal a 200x200km patch of magma-poor oceanic basement in the trench and beneath the outer fore-arc offshore of Antigua to Saint Martin in the Northern Lesser Antilles. These data highlight an oceanic basement with the following features: 1/ Absence of any reflection at typical Moho depth and layer2/layer3 limit depths. 2/ High Velocity Vp at the top (>5.5 km/s), low velocity gradient with depth (serpentinized at the slow-spreading mid-Atlantic Ridge 80 Myr ago, is currently subducting beneath the Northern Lesser Antilles. During the exhumation, early extension triggers penetrative shear zones sub-parallel to the ridge and to the transform fault. Eventually, this early extension generates sliding along the so-called detachment fault, while the other proto-detachment abort. Approaching the trench, the plate bending reactivates these weak zones in normal faults and fluid pathways promoting deep serpentinisation and localizing tectonic deformation at the plate interface. These subducting fluid-rich mechanically weak mantle rocks rise questions about their relation to the faster slab deepening, the lower seismic activity and the pervasive tectonic partitioning in this margin segment.

  13. Mean annual precipitation explains spatiotemporal patterns of Cenozoic mammal beta diversity and latitudinal diversity gradients in North America.

    Directory of Open Access Journals (Sweden)

    Danielle Fraser

    Full Text Available Spatial diversity patterns are thought to be driven by climate-mediated processes. However, temporal patterns of community composition remain poorly studied. We provide two complementary analyses of North American mammal diversity, using (i a paleontological dataset (2077 localities with 2493 taxon occurrences spanning 21 discrete subdivisions of the Cenozoic based on North American Land Mammal Ages (36 Ma--present, and (ii climate space model predictions for 744 extant mammals under eight scenarios of future climate change. Spatial variation in fossil mammal community structure (β diversity is highest at intermediate values of continental mean annual precipitation (MAP estimated from paleosols (∼ 450 mm/year and declines under both wetter and drier conditions, reflecting diversity patterns of modern mammals. Latitudinal gradients in community change (latitudinal turnover gradients, aka LTGs increase in strength through the Cenozoic, but also show a cyclical pattern that is significantly explained by MAP. In general, LTGs are weakest when continental MAP is highest, similar to modern tropical ecosystems in which latitudinal diversity gradients are weak or undetectable. Projections under modeled climate change show no substantial change in β diversity or LTG strength for North American mammals. Our results suggest that similar climate-mediated mechanisms might drive spatial and temporal patterns of community composition in both fossil and extant mammals. We also provide empirical evidence that the ecological processes on which climate space models are based are insufficient for accurately forecasting long-term mammalian response to anthropogenic climate change and inclusion of historical parameters may be essential.

  14. Meso-Cenozoic tectonic evolution and uranium potential evaluations of basins in Beishan-Gansu corridor region

    International Nuclear Information System (INIS)

    Guo Qingyin; Chen Zuyi; Liu Hongxu; Yu Jinshui


    Beishan-Gansu Corridor region is located at the intersection of the plates of Tarim, North China, Kazakhstan, Siberia and Qaidam. During the Meso-Cenozoic, the region experienced movements of Indo-sinian, Yanshanian, Sichuanian, North China, Himalayan and Neotectonic, and over 20 medium-small size superimposed continental basins were formed. On the basis of analyzing the tectonic stress field, sediment-filling and structure-deformation; the general trending of tectonic evolution in the Meso-Cenozoic is summarized as three-time compressional uplifting and two-time extensional down-faulting. The different evolution of basins under the above mentioned setting can be divided into six stages according to characteristics of filled sediment. The sand bodies developed in down-faulted basins are favorable for uranium ore-formation as they are formed under humid paleoclimates, and rich in reducing matter. Therefore, the Lower-Middle Jurassic is selected as the main target horizon for sandstone-hosted uranium deposit, and the Lower Cretaceous as the minor one. Although the tectonic reactivation of the target horizon after its deposition was generally strong, the slopes formed in some basins could be favorable for the infiltration of uranium-and oxygen-bearing groundwater into sand bodies and form uranium deposits. According to the favorable sand bodies and tectonic reactivation, the northern parts of Chaoshui and Bayingobi basins are regarded as potential regions which are worthy of further exploration. (authors)

  15. Late Cenozoic faulting and the stress state in the south-eastern segment of the Siberian platform

    Directory of Open Access Journals (Sweden)

    V. A. Sankov


    Full Text Available We have studied the structural geology and geomorphology of the fault zones in the junction area of the Angara-Lena uplift and the Predbaikalsky trough. We have analyzed faults and folds and reconstructed paleostresses for this junction area named the Irkutsk amphitheatre. Our study shows that syn-fold (Middle Paleozoic faults include thrusts, reverse faults and strike-slip faults with reverse components, that occurred due to compression from the neighbouring folded region. Recently, contrary to compression, faulting took place under the conditions of extension of the sedimentary cover: most of these recent faults have been classified as normal faults. In the Late Cenozoic, the platform cover was subjected to brittle and partly plicative deformation due to the NW–SE-trending extension that is most clearly observed in the adjacent Baikal rift. Thus, the divergent boundary between the Siberian block of the North Eurasian plate and the Transbaikalia block of the Amur plate is a zone of dynamic influence, which occupies the area considerably exceeding the mountainous region on the Siberian platform. Important factors of faulting are differentiated vertical movements of the blocks comprising the platform. Such vertical movements might have been related to displacements of brine volumes. In the Late Cenozoic basins, movements along separate faults took place in the Late Pleistocene – Holocene.

  16. Geochemical prerequisites of petroleum-gas formation in the Mesozoic-Cenozoic sedimentary layer of the world's oceans

    Energy Technology Data Exchange (ETDEWEB)

    Trotsyuk, V Ya


    A summarization is given of the latest material on the geochemistry of trace organic matter of Mesozoic-Cenozoic deposits of the world's oceans, obtained as a result of deep-sea drilling. Trace organic matter was found to be present in the sedimentary layers of the ocean outskirts in amounts near that found in the continental stratosphere, but that content was five times less in the interior region of the oceans. The trace organic matter of deposits in the marginal region of the oceans was found to have a significant petroleum-gas matrix potential with respect to the level of content and composition characteristics. The distribution of organic carbon was found to be uneven in variously aged horizons of the Mesozoic-Cenozoic. The maximum content of organic carbon was noted in the Neogene-Quaternary and lower Cretaceous deposits. An elevated content of trace organic matter was found to be characteristic of the oceanic stratisphere in lithological mixed sediments: terrigenous-carbonate and terrigenous-silicons was 1.5 times greater than the trace organic matter in clays. Fundamental geochemical propagation laws were formulated, possibly for petroleum-gas-bearing sediment basins under the ocean bottom and beyond the shelf. 18 references, 3 figures.

  17. Pre-Cenozoic basement rocks of the Proto-Philippine Sea Plate: Constraints for the birthplace of the Izu-Bonin-Mariana Arc (United States)

    Tani, K.; Ishizuka, O.; Horie, K.; Barth, A. P.; Harigane, Y.; Ueda, H.


    The Izu-Bonin-Mariana Arc is widely regarded to be a typical intra-oceanic arc, with the oceanic Pacific Plate subducting beneath the Philippine Sea Plate, an evolving complex of active and inactive arcs and back-arc basins. However, little is known about the origin of the proto-Philippine Sea Plate, which existed along with the Pacific Plate at the time of subduction initiation in the Eocene. To investigate the crustal structures of the proto-Philippine Sea Plate, we conducted manned-submersible and dredge surveys in the Daito Ridges and the Kyushu-Palau Ridge. The Daito Ridges comprise the northwestern Philippine Sea Plate along with what are regarded as remnants of the proto-Philippine Sea Plate. Submersible observations and rock sampling revealed that the Daito Ridges expose deep crustal sections of gabbroic, granitic, metamorphic, and ultra-mafic rocks, along with volcanic rocks ranging from basalt to andesite. Mesozoic magmatic zircon U-Pb ages have been obtained from the plutonic rocks, and whole-rock geochemistry of the igneous rocks indicates arc origins. Furthermore, mafic schist collected from the Daito Ridge has experienced amphibolite facies metamorphism, with phase assemblages suggesting that the crust was thicker than 20 km at the time. Similar amphibolite-facies metamorphic rocks with Proterozoic zircons have been recovered in the southern Kyushu-Palau Ridge, indicating that such distinctively older basement rocks exist as isolated tectonic blocks within the present Philippine Sea Plate. These finds show that the parts of the Daito Ridges and Kyushu-Palau Ridge represent developed crustal sections of the Pre-Cenozoic arc that comprises part of the proto-Philippine Sea Plate, and, together with the tectonic reconstruction of the proto-Philippine Sea Plate (Deschamps and Lallemand 2002, JGR), they suggest that subduction of the Izu-Bonin-Mariana Arc initiated at the continental margin of the Southeast Asia.

  18. The Cenozoic fold-and-thrust belt of Eastern Sardinia: Evidences from the integration of field data with numerically balanced geological cross section (United States)

    Arragoni, S.; Maggi, M.; Cianfarra, P.; Salvini, F.


    Newly collected structural data in Eastern Sardinia (Italy) integrated with numerical techniques led to the reconstruction of a 2-D admissible and balanced model revealing the presence of a widespread Cenozoic fold-and-thrust belt. The model was achieved with the FORC software, obtaining a 3-D (2-D + time) numerical reconstruction of the continuous evolution of the structure through time. The Mesozoic carbonate units of Eastern Sardinia and their basement present a fold-and-thrust tectonic setting, with a westward direction of tectonic transport (referred to the present-day coordinates). The tectonic style of the upper levels is thin skinned, with flat sectors prevailing over ramps and younger-on-older thrusts. Three regional tectonic units are present, bounded by two regional thrusts. Strike-slip faults overprint the fold-and-thrust belt and developed during the Sardinia-Corsica Block rotation along the strike of the preexisting fault ramps, not affecting the numerical section balancing. This fold-and-thrust belt represents the southward prosecution of the Alpine Corsica collisional chain and the missing link between the Alpine Chain and the Calabria-Peloritani Block. Relative ages relate its evolution to the meso-Alpine event (Eocene-Oligocene times), prior to the opening of the Tyrrhenian Sea (Tortonian). Results fill a gap of information about the geodynamic evolution of the European margin in Central Mediterranean, between Corsica and the Calabria-Peloritani Block, and imply the presence of remnants of this double-verging belt, missing in the Southern Tyrrhenian basin, within the Southern Apennine chain. The used methodology proved effective for constraining balanced cross sections also for areas lacking exposures of the large-scale structures, as the case of Eastern Sardinia.

  19. Analysis of the asymmetrically expressed Ablim1 locus reveals existence of a lateral plate Nodal-independent left sided signal and an early, left-right independent role for nodal flow

    Directory of Open Access Journals (Sweden)

    Hilton Helen


    Full Text Available Abstract Background Vertebrates show clear asymmetry in left-right (L-R patterning of their organs and associated vasculature. During mammalian development a cilia driven leftwards flow of liquid leads to the left-sided expression of Nodal, which in turn activates asymmetric expression of the transcription factor Pitx2. While Pitx2 asymmetry drives many aspects of asymmetric morphogenesis, it is clear from published data that additional asymmetrically expressed loci must exist. Results A L-R expression screen identified the cytoskeletally-associated gene, actin binding lim protein 1 (Ablim1, as asymmetrically expressed in both the node and left lateral plate mesoderm (LPM. LPM expression closely mirrors that of Nodal. Significantly, Ablim1 LPM asymmetry was detected in the absence of detectable Nodal. In the node, Ablim1 was initially expressed symmetrically across the entire structure, resolving to give a peri-nodal ring at the headfold stage in a flow and Pkd2-dependent manner. The peri-nodal ring of Ablim1 expression became asymmetric by the mid-headfold stage, showing stronger right than left-sided expression. Node asymmetry became more apparent as development proceeded; expression retreated in an anticlockwise direction, disappearing first from the left anterior node. Indeed, at early somite stages Ablim1 shows a unique asymmetric expression pattern, in the left lateral plate and to the right side of the node. Conclusion Left LPM Ablim1 is expressed in the absence of detectable LPM Nodal, clearly revealing existence of a Pitx2 and Nodal-independent left-sided signal in mammals. At the node, a previously unrecognised action of early nodal flow and Pkd2 activity, within the pit of the node, influences gene expression in a symmetric manner. Subsequent Ablim1 expression in the peri-nodal ring reveals a very early indication of L-R asymmetry. Ablim1 expression analysis at the node acts as an indicator of nodal flow. Together these results make

  20. Mathematics revealed

    CERN Document Server

    Berman, Elizabeth


    Mathematics Revealed focuses on the principles, processes, operations, and exercises in mathematics.The book first offers information on whole numbers, fractions, and decimals and percents. Discussions focus on measuring length, percent, decimals, numbers as products, addition and subtraction of fractions, mixed numbers and ratios, division of fractions, addition, subtraction, multiplication, and division. The text then examines positive and negative numbers and powers and computation. Topics include division and averages, multiplication, ratios, and measurements, scientific notation and estim

  1. Numerical modeling of the late Cenozoic geomorphic evolution of Grand Canyon, Arizona (United States)

    Pelletier, J. D.


    The late Cenozoic geomorphic evolution of Grand Canyon has been influenced by three primary tectonic and drainage adjustment events. First, incision into the Paleozoic strata of the southwestern margin of the Colorado Plateau began at 16 Ma in response to relief production along the Grand Wash Fault. Second, the ancestral Upper Colorado River reversed drainage and became integrated with the Lower Colorado River basin through Grand Canyon between 5.5 and 6 Ma. Third, the Colorado River was influenced by Plio- Quaternary normal faulting along the Hurricane and Toroweap Faults. Despite the relatively firm constraints available on the timing of these events, the geomorphic evolution of Grand Canyon is still not well constrained and many questions remain. For example, was there a deeply-incised gorge in western Grand Canyon before Colorado River integration? How and where was the Colorado River integrated? How have incision rates varied in space and time? In this paper, I describe the results of a numerical modeling study designed to address these questions. The model integrates the stream power model for bedrock channel erosion with cliff retreat and the flexural-isostatic response to erosion. The model honors the structural geology of the Grand Canyon region, including the variable erodibility of rocks in the Colorado Plateau and the occurrence of Plio-Quaternary normal faulting along the Hurricane-Toroweap Fault system. We present the results of two models designed to bracket the possible drainage architectures of the southwestern margin of the Colorado Plateau in Miocene time. In the first model, we assume a 13,000 km2 drainage basin primarily sourced from the Hualapai and Coconino Plateaux. The results of this model indicate that relief production along the Grand Wash fault initiated the formation of a large (700 m) knickpoint that migrated headward at a rate of 15 km/Myr prior to drainage integration at 6 Ma to form a deep gorge in western Grand Canyon. This model

  2. Paleomagnetic constraints on the Mesozoic-Cenozoic paleolatitudinal and rotational history of Indochina and South China : Review and updated kinematic reconstruction

    NARCIS (Netherlands)

    Li, Shihu; Advokaat, Eldert L.; van Hinsbergen, Douwe J.J.; Koymans, Mathijs; Deng, Chenglong; Zhu, Rixiang

    Paleomagnetic data have long been used to hypothesize that the Cenozoic extrusion of the Indochina Block along the left-lateral Ailao Shan-Red River fault, as a result of the India-Asia collision, may have been associated with a major southward paleolatitude shift of as much as 10–15°, and a


    Directory of Open Access Journals (Sweden)

    Eugene V. Sklyarov


    Full Text Available The information on the «Cenozoic Continental Rifting» Symposium dedicated to the memory of Academician N.A. Logachev is presented. It was held on June 7–11, 2010 at the Institute of the Earth’s Crust, Irkutsk. The scope of conference is presented.

  4. U-Pb zircon geochronology of the Paleogene - Neogene volcanism in the NW Anatolia: Its implications for the Late Mesozoic-Cenozoic geodynamic evolution of the Aegean (United States)

    Ersoy, E. Yalçın; Akal, Cüneyt; Genç, Ş. Can; Candan, Osman; Palmer, Martin R.; Prelević, Dejan; Uysal, İbrahim; Mertz-Kraus, Regina


    The northern Aegean region was shaped by subduction, obduction, collision, and post-collisional extension processes. Two areas in this region, the Rhodope-Thrace-Biga Peninsula to the west and Armutlu-Almacık-Nallıhan (the Central Sakarya) to the east, are characterized by extensive Eocene to Miocene post-collisional magmatic associations. We suggest that comparison of the Cenozoic magmatic events of these two regions may provide insights into the Late Mesozoic to Cenozoic tectonic evolution of the Aegean. With this aim, we present an improved Cenozoic stratigraphy of the Biga Peninsula derived from a new comprehensive set of U-Pb zircon age data obtained from the Eocene to Miocene volcanic units in the region. The compiled radiometric age data show that calc-alkaline volcanic activity occurred at 43-15 Ma in the Biga Peninsula, 43-17 Ma in the Rhodope and Thrace regions, and 53-38 Ma in the Armutlu-Almacık-Nallıhan region, which are slightly overlapping. We discuss the possible cause for the distinct Cenozoic geodynamic evolution of the eastern and western parts of the region, and propose that the Rhodope, Thrace and Biga regions in the north Aegean share the same Late Mesozoic to Cenozoic geodynamic evolution, which is consistent with continuous subduction, crustal accretion, southwestward trench migration and accompanying extension; all preceded by the Late Cretaceous - Paleocene collision along the Vardar suture zone. In contrast, the Armutlu-Almacık-Nallıhan region was shaped by slab break-off and related processes following the Late Cretaceous - Paleocene collision along the İzmir-Ankara suture zone. The eastern and western parts of the region are presently separated by a northeast-southwest trending transfer zone that was likely originally present as a transform fault in the subducted Tethys oceanic crust, and demonstrates that the regional geodynamic evolution can be strongly influenced by the geographical distribution of geologic features on the

  5. Prognostic implications of serial risk score assessments in patients with pulmonary arterial hypertension: a Registry to Evaluate Early and Long-Term Pulmonary Arterial Hypertension Disease Management (REVEAL) analysis. (United States)

    Benza, Raymond L; Miller, Dave P; Foreman, Aimee J; Frost, Adaani E; Badesch, David B; Benton, Wade W; McGoon, Michael D


    Data from the Registry to Evaluate Early and Long-Term Pulmonary Arterial Hypertension Disease Management (REVEAL) were used previously to develop a risk score calculator to predict 1-year survival. We evaluated prognostic implications of changes in the risk score and individual risk-score parameters over 12 months. Patients were grouped by decreased, unchanged, or increased risk score from enrollment to 12 months. Kaplan-Meier estimates of subsequent 1-year survival were made based on change in the risk score during the initial 12 months of follow-up. Cox regression was used for multivariable analysis. Of 2,529 patients in the analysis cohort, the risk score was decreased in 800, unchanged in 959, and increased in 770 at 12 months post-enrollment. Six parameters (functional class, systolic blood pressure, heart rate, 6-minute walk distance, brain natriuretic peptide levels, and pericardial effusion) each changed sufficiently over time to improve or worsen risk scores in ≥5% of patients. One-year survival estimates in the subsequent year were 93.7%, 90.3%, and 84.6% in patients with a decreased, unchanged, and increased risk score at 12 months, respectively. Change in risk score significantly predicted future survival, adjusting for risk at enrollment. Considering follow-up risk concurrently with risk at enrollment, follow-up risk was a much stronger predictor, although risk at enrollment maintained a significant effect on future survival. Changes in REVEAL risk scores occur in most patients with pulmonary arterial hypertension over a 12-month period and are predictive of survival. Thus, serial risk score assessments can identify changes in disease trajectory that may warrant treatment modifications. Copyright © 2015 International Society for Heart and Lung Transplantation. All rights reserved.

  6. Understanding the uplift pattern in Mesozoic and Cenozoic,, eastern Dabie area, China using fission track dating of apatite

    International Nuclear Information System (INIS)

    Wu Qianhong; Liu Shunsheng


    By using the fission track dating technique, a preliminary study was carried out on the fission track ages (FTA) of apatite, their distribution patterns and hints over the tectonics activities during Mesozoic and Cenozoic in the east Dabie area. Attempts were also made to improve the conventional statistical method for the tracks. Ranging from 59.4 +- 3.4 Ma to 105.6 +- 9.8 Ma, the FTA results of apatite spread in the wide range and increased rapidly from the east to the west area. Sine 95 Ma, the uplift rate has been quite slow and asymmetry. The FTA value in the middle area of Xiaotian-Mozitan Fault may imply its uplift in Cretaceous. The faulting should be the main control factor for the uplift of this area

  7. Review of and contribution to the Stratigraphy of the Cenozoic Igneous Rocks in the Republic of Yemen

    International Nuclear Information System (INIS)

    El-Nakhal, H.A.


    In Yemen the Cenozoic igneous rocks consists of intrusive and extrusive rocks with interlayered sediments, all of which are included within the Manakha Group (latest Cretaceous-Holocene). This group is subdivided into the Haraz Formation which includes the latest Cretaceous-Tertiary volcanics and the interlayered sediments, the Aden Formation which includes the Late Tertiary-Holocene volcanics, and the Bura Formations are introduced here as new units. The Haraz Formation replaces the informal names: Trap Series, Yemen Volcanics and Aden Trap Series, Yemen Volcanics and Adan Trap Series.The Adan Formation are a readaptation of the term Aden Vocanic Series. A startotype for the Aden Formation is designated in the Shuqra-Ahwar area. (author)


    Directory of Open Access Journals (Sweden)

    Sergey V. Rasskazov


    Full Text Available N.A. Florensov and N.A. Logatchev pioneered development of fundamental concepts of the structure and evolution of the Baikal system of rift basins. At the turn to the 21st century, in view of the wide availability of scientific research data on the Cenozoic continental rift zones located in Eurasia, Africa and North America, and taking into account the application of new research methods and options to process and analyze huge amounts of geological and geophysical data, a priority was comprehensive modeling of rifting from its origin to the current period of time. This scientific challenge was addressed by the research team under the leadership of N.A. Logachev.

  9. Geochemistry of cenozoic basaltic rocks from Shandong province and its implication for mantle process in North China

    International Nuclear Information System (INIS)

    Lee Yungtan; Chen Juchin; Huang Shaowei; Shih Jyhyi; Lin Menglung; Juang Wenshing; Yang Huaijen


    Cenozoic (Miocene to Pleistocene) basaltic rocks found in Shandong province of northern China include tholeiite, olivine tholeiite and alkali basalt. We present major, trace and rare earth elements data of these basalts and together with Sr-Nd isotopic data in the literatures to discuss the petrogenesis of these basalts. The basalts from Penglai area have higher K, Na and P and incompatible elements, but lower Ca, Mg and compatible elements contents than those from Changle area of Shandong province. Spidergrams indicate that Cenozoic basalts from Shandong province have geochemical characteristics similar to those of ocean island basalts (OIB) with slight positive Nb anomaly. The negative Ba, Rb and K anomalies found in the alkali basalts suggest the presence of residual phlogopite in the mantle source, indicating a metasomatic event occurred before the partial melting. The 143 Nd/ 144 Nd vs. 87 Sr/ 86 Sr plot suggested that basalts from Shandong province can be produced by MORB and EM-I components mixing. We propose that the EM-I type lithospheric mantle may have been produced by the recent H 2 O-CO 2 -fluids metasomatism and the fluids may be derived from dehydration of the subducted slab. Based on Shaw's equation, the basalts from eastern and central Shandong province have undergone different degrees of particle melting from the mantle source. Degrees of partial melting and chemical composition of basalts from Shandong province suggest that the lithosphere has thickened progressively since the Miocene. On the basis of Ar-Ar ages of this study and the fractional crystallization model proposed by Brooks and Nielsen (1982), we suggest that basalts from Changle and Penglai areas belong to different magmatic systems which have undergone fractional crystallization and evolved progressively to produce other types of basalts. (author)

  10. Colorado Late Cenozoic Fault and Fold Database and Internet Map Server: User-friendly technology for complex information (United States)

    Morgan, K.S.; Pattyn, G.J.; Morgan, M.L.


    Internet mapping applications for geologic data allow simultaneous data delivery and collection, enabling quick data modification while efficiently supplying the end user with information. Utilizing Web-based technologies, the Colorado Geological Survey's Colorado Late Cenozoic Fault and Fold Database was transformed from a monothematic, nonspatial Microsoft Access database into a complex information set incorporating multiple data sources. The resulting user-friendly format supports easy analysis and browsing. The core of the application is the Microsoft Access database, which contains information compiled from available literature about faults and folds that are known or suspected to have moved during the late Cenozoic. The database contains nonspatial fields such as structure type, age, and rate of movement. Geographic locations of the fault and fold traces were compiled from previous studies at 1:250,000 scale to form a spatial database containing information such as length and strike. Integration of the two databases allowed both spatial and nonspatial information to be presented on the Internet as a single dataset ( The user-friendly interface enables users to view and query the data in an integrated manner, thus providing multiple ways to locate desired information. Retaining the digital data format also allows continuous data updating and quick delivery of newly acquired information. This dataset is a valuable resource to anyone interested in earthquake hazards and the activity of faults and folds in Colorado. Additional geologic hazard layers and imagery may aid in decision support and hazard evaluation. The up-to-date and customizable maps are invaluable tools for researchers or the public.

  11. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Energy Technology Data Exchange (ETDEWEB)

    Pavlis, T L; Serpa, L [Department of Geological Sciences, University of Texas at El Paso, El Paso, TX 7996 (United States); Miller, M [Department of Geological Sciences, University of Oregon, Eugene, OR 97403 (United States)], E-mail:


    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  12. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    International Nuclear Information System (INIS)

    Pavlis, T L; Serpa, L; Miller, M


    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  13. Revealing Rembrandt

    Directory of Open Access Journals (Sweden)

    Andrew J Parker


    Full Text Available The power and significance of artwork in shaping human cognition is self-evident. The starting point for our empirical investigations is the view that the task of neuroscience is to integrate itself with other forms of knowledge, rather than to seek to supplant them. In our recent work, we examined a particular aspect of the appreciation of artwork using present-day functional magnetic resonance imaging (fMRI. Our results emphasised the continuity between viewing artwork and other human cognitive activities. We also showed that appreciation of a particular aspect of artwork, namely authenticity, depends upon the co-ordinated activity between the brain regions involved in multiple decision making and those responsible for processing visual information. The findings about brain function probably have no specific consequences for understanding how people respond to the art of Rembrandt in comparison with their response to other artworks. However, the use of images of Rembrandt’s portraits, his most intimate and personal works, clearly had a significant impact upon our viewers, even though they have been spatially confined to the interior of an MRI scanner at the time of viewing. Neuroscientific studies of humans viewing artwork have the capacity to reveal the diversity of human cognitive responses that may be induced by external advice or context as people view artwork in a variety of frameworks and settings.

  14. Cenozoic landforms and post-orogenic landscape evolution of the Balkanide orogen: Evidence for alternatives to the tectonic denudation narrative in southern Bulgaria (United States)

    Gunnell, Y.; Calvet, M.; Meyer, B.; Pinna-Jamme, R.; Bour, I.; Gautheron, C.; Carter, A.; Dimitrov, D.


    Continental denudation is the mass transfer of rock from source areas to sedimentary depocentres, and is typically the result of Earth surface processes. However, a process known as tectonic denudation is also understood to expose deep-seated rocks in short periods of geological time by displacing large masses of continental crust along shallow-angle faults, and without requiring major contributions from surface erosion. Some parts of the world, such as the Basin and Range in the USA or the Aegean province in Europe, have been showcased for their Cenozoic tectonic denudation features, commonly described as metamorphic core-complexes or as supradetachment faults. Based on 22 new apatite fission-track (AFT) and 21 helium (AHe) cooling ages among rock samples collected widely from plateau summits and their adjacent valley floors, and elaborating on inconsistencies between the regional stratigraphic, topographic and denudational records, this study frames a revised perspective on the prevailing tectonic denudation narrative for southern Bulgaria. We conclude that conspicuous landforms in this region, such as erosion surfaces on basement-cored mountain ranges, are not primarily the result of Paleogene to Neogene core-complex formation. They result instead from "ordinary" erosion-driven, subaerial denudation. Rock cooling, each time suggesting at least 2 km of crustal denudation, has exposed shallow Paleogene granitic plutons and documents a 3-stage wave of erosional denudation which progressed from north to south during the Middle Eocene, Oligocene, Early to Middle Miocene, and Late Miocene. Denudation initially prevailed during the Paleogene under a syn-orogenic compressional regime involving piggyback extensional basins (Phase 1), but subsequently migrated southward in response to post-orogenic upper-plate extension driven by trench rollback of the Hellenic subduction slab (Phase 2). Rare insight given by the denudation pattern indicates that trench rollback

  15. Palaeomagnetism and K-Ar age of Mesozoic and Cenozoic igneous rocks from Antarctica

    International Nuclear Information System (INIS)

    Valencio, D.A.; Mendia, J.E.; Vilas, J.F.


    A new analysis of palaeomagnetic data for igneous rocks from Deception Island, 25 de Mayo Island (King George Island) and Cape Spring, are given. K-Ar age determinations indicate that most of the igneous samples from 25 de Mayo Island included in the palaeomagnetic study are of Late Mesozoic/Early Tertiary age. The significance of these palaeomagnetic-radiometric data on the hypothesis of oroclinal bending of the Antarctic Peninsula and on the apparent polar movement of Antarctica is discussed. The positions of palaeomagnetic poles for the Andean igneous complex indicate that there has not been any apparent post-Late Cretaceous/Early Tertiary oroclinal bending in the Antarctic Peninsula from 74 0 S to 62 0 S. A comparison of the positions of palaeomagnetic poles for Antarctica and Australia suggests that the direction of apparent polar movement relative to Antarctica reversed after the Miocene. (Auth.)

  16. U-Pb ages of detrital zircon from Cenozoic sediments in the southwestern Tarim Basin, NW China: Implications for Eocene-Pliocene source-to-sink relations and new insights into Cretaceous-Paleogene magmatic sources (United States)

    Yang, Wei; Fu, Ling; Wu, Chaodong; Song, Yan; Jiang, Zhenxue; Luo, Qun; Zhang, Ziya; Zhang, Chen; Zhu, Bei


    A detailed investigation of potential provenance is still lacking in the southwestern Tarim Basin, which restricts our complete understanding of Cenozoic source-to-sink relations between the basin interior and the Pamir salient - western Kunlun Mountain Range. Debate also exists concerning the potential sources of the Paleogene and Cretaceous igneous detritus present in the Cenozoic sedimentary sequences. Here, we present U-Pb (LA-ICP-MS) ages of detrital zircons from the continuous Eocene-Pliocene sediment series in the well-exposed Aertashi section to investigate changes in sediment provenance through time. The U-Pb detrital zircon ages range widely from 45 to 3204 Ma and can be divided into seven main groups: 45-65 Ma (sub-peak at 49 Ma), 67-103 Ma (sub-peak at 95 Ma), 196-251 Ma (sub-peak at 208 Ma), 252-416 Ma (sub-peak at 296 Ma), 417-540 Ma (sub-peak at 446 Ma), 550-1429 Ma (sub-peaks at 614 Ma, 828 Ma and 942 Ma) and 1345-3204 Ma (sub-peaks at 1773 Ma and 2480 Ma). These zircons were mainly derived from the western Kunlun Mountain Range and northern Pamir salient to the west and south. The evolution of the provenance and source-to-sink relationship patterns in the southwestern Tarim Basin can be divided into three stages: (1) The Middle Eocene to Lower Oligocene sediments display a wide variety of detrital zircon ages, suggesting that the source area was extensive. (2) A major change in provenance occurred during the Late Oligocene to Early Miocene and was characterized by an abrupt increase in the proportion of Triassic and Lower Paleozoic igneous components, implying a significant adjustment in topography induced by the initial uplift and exhumation of the western Kunlun Mountain Range and northern Pamir salient. (3) In the Late Miocene, the source-to-sink system transformed again, and contributions of Triassic to Lower Paleozoic material weakened substantially due to the sufficient indentation of the Pamir salient. Our integrated analyses of zircon

  17. Cenozoic intra-plate magmatism in the Darfur volcanic province: mantle source, phonolite-trachyte genesis and relation to other volcanic provinces in NE Africa (United States)

    Lucassen, Friedrich; Pudlo, Dieter; Franz, Gerhard; Romer, Rolf L.; Dulski, Peter


    Chemical and Sr, Nd and Pb isotopic compositions of Late Cenozoic to Quaternary small-volume phonolite, trachyte and related mafic rocks from the Darfur volcanic province/NW-Sudan have been investigated. Isotope signatures indicate variable but minor crustal contributions. Some phonolitic and trachytic rocks show the same isotopic composition as their primitive mantle-derived parents, and no crustal contributions are visible in the trace element patterns of these samples. The magmatic evolution of the evolved rocks is dominated by crystal fractionation. The Si-undersaturated strongly alkaline phonolite and the Si-saturated mildly alkaline trachyte can be modelled by fractionation of basanite and basalt, respectively. The suite of basanite-basalt-phonolite-trachyte with characteristic isotope signatures from the Darfur volcanic province fits the compositional features of other Cenozoic intra-plate magmatism scattered in North and Central Africa (e.g., Tibesti, Maghreb, Cameroon line), which evolved on a lithosphere that was reworked or formed during the Neoproterozoic.

  18. Petrology and geochemistry and K-Ar ages for Cenozoic tinguaites from the Ohře/Eger Rift (NW Bohemia)

    Czech Academy of Sciences Publication Activity Database

    Ulrych, Jaromír; Novák, Jiří Karel; Lang, Miloš; Balogh, K.; Hegner, E.; Řanda, Zdeněk


    Roč. 183, č. 1 (2006), s. 41-61 ISSN 0077-7757 R&D Projects: GA AV ČR IAA3048201 Institutional research plan: CEZ:AV0Z30130516; CEZ:AV0Z10480505 Keywords : České středohoří Mts. * Ohře/Eger Rift * Roztoky Intrusive Center * tinguaite dikes * Cenozoic volcanism Subject RIV: DB - Geology ; Mineralogy Impact factor: 0.577, year: 2006

  19. The age and diversification of terrestrial New World ecosystems through Cretaceous and Cenozoic time. (United States)

    Graham, Alan


    Eight ecosystems that were present in the Cretaceous about 100 Ma (million years ago) in the New World eventually developed into the 12 recognized for the modern Earth. Among the forcing mechanisms that drove biotic change during this interval was a decline in global temperatures toward the end of the Cretaceous, augmented by the asteroid impact at 65 Ma and drainage of seas from continental margins and interiors; separation of South America from Africa beginning in the south at ca. 120 Ma and progressing northward until completed 90-100 Ma; the possible emission of 1500 gigatons of methane and CO(2) attributed to explosive vents in the Norwegian Sea at ca. 55 Ma, resulting in a temperature rise of 5°-6°C in an already warm world; disruption of the North Atlantic land bridge at ca. 45 Ma at a time when temperatures were falling; rise of the Andes Mountains beginning at ca. 40 Ma; opening of the Drake Passage between South America and Antarctica at ca. 32 Ma with formation of the cold Humboldt at ca. 30 Ma; union of North and South America at ca. 3.5 Ma; and all within the overlay of evolutionary processes. These processes generated a sequence of elements (e.g., species growing in moist habitats within an overall dry environment; gallery forests), early versions (e.g., mangrove communities without Rhizophora until the middle Eocene), and essentially modern versions of present-day New World ecosystems. As a first approximation, the fossil record suggests that early versions of aquatic communities (in the sense of including a prominent angiosperm component) appeared early in the Middle to Late Cretaceous, the lowland neotropical rainforest at 64 Ma (well developed by 58-55 Ma), shrubland/chaparral-woodland-savanna and grasslands around the middle Miocene climatic optimum at ca. 15-13 Ma, deserts in the middle Miocene/early Pliocene at ca. 10 Ma, significant tundra at ca. 7-5 Ma, and alpine tundra (páramo) shortly thereafter when cooling temperatures were augmented

  20. Evolutionary History of Atmospheric CO2 during the Late Cenozoic from Fossilized Metasequoia Needles.

    Directory of Open Access Journals (Sweden)

    Yuqing Wang

    Full Text Available The change in ancient atmospheric CO2 concentrations provides important clues for understanding the relationship between the atmospheric CO2 concentration and global temperature. However, the lack of CO2 evolution curves estimated from a single terrestrial proxy prevents the understanding of climatic and environmental impacts due to variations in data. Thus, based on the stomatal index of fossilized Metasequoia needles, we reconstructed a history of atmospheric CO2 concentrations from middle Miocene to late Early Pleistocene when the climate changed dramatically. According to this research, atmospheric CO2 concentration was stabile around 330-350 ppmv in the middle and late Miocene, then it decreased to 278-284 ppmv during the Late Pliocene and to 277-279 ppmv during the Early Pleistocene, which was almost the same range as in preindustrial time. According to former research, this is a time when global temperature decreased sharply. Our results also indicated that from middle Miocene to Pleistocene, global CO2 level decreased by more than 50 ppmv, which may suggest that CO2 decrease and temperature decrease are coupled.

  1. Evolutionary History of Atmospheric CO2 during the Late Cenozoic from Fossilized Metasequoia Needles. (United States)

    Wang, Yuqing; Momohara, Arata; Wang, Li; Lebreton-Anberrée, Julie; Zhou, Zhekun


    The change in ancient atmospheric CO2 concentrations provides important clues for understanding the relationship between the atmospheric CO2 concentration and global temperature. However, the lack of CO2 evolution curves estimated from a single terrestrial proxy prevents the understanding of climatic and environmental impacts due to variations in data. Thus, based on the stomatal index of fossilized Metasequoia needles, we reconstructed a history of atmospheric CO2 concentrations from middle Miocene to late Early Pleistocene when the climate changed dramatically. According to this research, atmospheric CO2 concentration was stabile around 330-350 ppmv in the middle and late Miocene, then it decreased to 278-284 ppmv during the Late Pliocene and to 277-279 ppmv during the Early Pleistocene, which was almost the same range as in preindustrial time. According to former research, this is a time when global temperature decreased sharply. Our results also indicated that from middle Miocene to Pleistocene, global CO2 level decreased by more than 50 ppmv, which may suggest that CO2 decrease and temperature decrease are coupled.

  2. A constrained African craton source for the Cenozoic Numidian Flysch: Implications for the palaeogeography of the western Mediterranean basin (United States)

    Thomas, M. F. H.; Bodin, S.; Redfern, J.; Irving, D. H. B.


    The provenance of the Numidian Flysch in the western Mediterranean remains a controversial subject which hinders understanding of this regionally widespread depositional system. The Numidian Flysch is a deep marine formation dated as Oligocene to Miocene which outcrops throughout the Maghreb and into Italy. Evidence that is widely used for provenance analysis has not previously been reviewed within the context of the Maghrebian Flysch Basin as a whole. The structural location within the Alpine belt indicates deposition proximal to the African margin, while the uniformity of the Numidian Flysch petrofacies suggests a single cratonic source, in stark contrast to heterolithic and immature flysch formations from the north of the basin. Detrital zircon ages constrain a source region with Pan-African and Eburnian age rocks, unaffected by either Hercynian or Alpine tectonic events, which precludes the European basement blocks to the north of the basin. Palaeocurrent trends which suggest a northern source are unreliable given foreland basin analogues and observed structural complications. An African craton source remains the only viable option once these data are reviewed in their entirety, and the Numidian Flysch therefore represents a major Cenozoic drainage system on the North African margin. Deposition is concurrent with regional Atlas uplift phases, and coincidental with globally cooling climates and high sea levels. The Numidian Flysch is therefore interpreted to represent a highstand passive margin deposit, with timing of deposition controlled primarily by hinterland uplift and climatic fluctuations.

  3. Zircon (U-Th)/He Thermochronometric Constraints on Himalayan Thrust Belt Exhumation, Bedrock Weathering, and Cenozoic Seawater Chemistry (United States)

    Colleps, Cody L.; McKenzie, N. Ryan; Stockli, Daniel F.; Hughes, Nigel C.; Singh, Birendra P.; Webb, A. Alexander G.; Myrow, Paul M.; Planavsky, Noah J.; Horton, Brian K.


    Shifts in global seawater 187Os/188Os and 87Sr/86Sr are often utilized as proxies to track global weathering processes responsible for CO2 fluctuations in Earth history, particularly climatic cooling during the Cenozoic. It has been proposed, however, that these isotopic records instead reflect the weathering of chemically distinctive Himalayan lithologies exposed at the surface. We present new zircon (U-Th)/He thermochronometric and detrital zircon U-Pb geochronologic evidence from the Himalaya of northwest India to explore these contrasting interpretations concerning the driving mechanisms responsible for these seawater records. Our data demonstrate in-sequence southward thrust propagation with rapid exhumation of Lesser Himalayan strata enriched in labile 187Os and relatively less in radiogenic 87Sr at ˜16 Ma, which directly corresponds with coeval shifts in seawater 187Os/188Os and 87Sr/86Sr. Results presented here provide substantial evidence that the onset of exhumation of 187Os-enriched Lesser Himalayan strata could have significantly impacted the marine 187Os/188Os record at 16 Ma. These results support the hypothesis that regional weathering of isotopically unique source rocks can drive seawater records independently from shifts in global-scale weathering rates, hindering the utility of these records as reliable proxies to track global weathering processes and climate in deep geologic time.

  4. The evolution and ascent paths of mantle xenolith-bearing magma: Observations and insights from Cenozoic basalts in Southeast China (United States)

    Sun, Pu; Niu, Yaoling; Guo, Pengyuan; Cui, Huixia; Ye, Lei; Liu, Jinju


    Studies have shown that mantle xenolith-bearing magmas must ascend rapidly to carry mantle xenoliths to the surface. It has thus been inferred inadvertently that such rapid ascending melt must have undergone little crystallization or evolution. However, this inference is apparently inconsistent with the widespread observation that xenolith-bearing alkali basalts are variably evolved with Mg# ≤72. In this paper, we discuss this important, yet overlooked, petrological problem and offer new perspectives with evidence. We analyzed the Cenozoic mantle xenolith-bearing alkali basalts from several locations in Southeast China that have experienced varying degrees of fractional crystallization (Mg# = 48-67). The variably evolved composition of host alkali basalts is not in contradiction with rapid ascent, but rather reflects inevitability of crystallization during ascent. Thermometry calculations for clinopyroxene (Cpx) megacrysts give equilibrium temperatures of 1238-1390 °C, which is consistent with the effect of conductive cooling and melt crystallization during ascent because TMelt > TLithosphere. The equilibrium pressure (18-27 kbar) of these Cpx megacrysts suggests that the crystallization takes place under lithospheric mantle conditions. The host melt must have experienced limited low-pressure residence in the shallower levels of lithospheric mantle and crust. This is in fact consistent with the rapid ascent of the host melt to bring mantle xenoliths to the surface.

  5. Effects of a variable Sun at the beginning of the Cenozoic era

    International Nuclear Information System (INIS)

    Sonnenfeld, P.


    Periodic bursts of increased ultraviolet radiation, possibly caused by a long-term breakdown of the ozone layer in late Cretaceous to early Tertiary time, can explain the staggered extinctions of terrestrial, marine and flying reptiles, of invertebrate plankton feeders. Inherited protective devices and habits of surviving genera support this hypothesis. Increased radiation also explains the concurrent decrease in aridity indicated by the world-wide absence of marine salt and potash deposits from Maestrichtian, Danian, Paleocene and Eocene sediments, the poleward displacement of marine tropical faunas and the warm-temperate forests in high latitudes. A magnetic reversal is too brief an event to be responsible for the faunal changes; variations in solar radiation of the order of the Kelvin-Helmholtz time, or 30-40 million years, with superimposed shorter periodicities are a probable cause. (Auth.)

  6. The morphostructure of the atlantic ocean floor its development in the meso-cenozoic

    CERN Document Server

    Litvin, V M


    The study of the topography and structure of the ocean floor is one of the most important stages in ascertaining the geological structure and history of development of the Earth's oceanic crust. This, in its turn, provides a means for purposeful, scientifically-substantiated prospecting, exploration and development of the mineral resources of the ocean. The Atlantic Ocean has been geologically and geophysically studied to a great extent and many years of investigating its floor have revealed the laws governing the structure of the major forms of its submarine relief (e. g. , the continental shelf, the continental slope, the transition zones, the ocean bed, and the Mid-Oceanic Ridge). The basic features of the Earth's oceanic crust structure, anomalous geophysical fields, and the thickness and structure of its sedimentary cover have also been studied. Based on the investigations of the Atlantic Ocean floor and its surrounding continents, the presently prevalent concept of new global tectonics has appeared. A g...

  7. Regional cenozoic uplift and subsidence events in the southeastern North Sea

    Energy Technology Data Exchange (ETDEWEB)

    Jordt, H.


    The Paleocene topography of the Fennoscandian Shield is indicated by outbuilding towards the Central Trough and the Ringkoebing-Fyn High. From Eocene until Pliocene time three events of relative vertical movements are indicated by changes in outbuilding directions and reflection termination patterns in the central North Sea. The firs event of uplift was in the Eocene and resulted in relative uplift of the Mid North Sea High and contemporary subsidence east of it, indicated by a change in outbuilding from north to west. A second event of uplift is indicated to the north of the study area at the Eocene-Oligocene boundary by renewed southward outbuilding in the Norwegian-Danish Basin. In Miocene until Early Pliocene time a relatively stationary, almost east-west striking, basin margin was probably located to the north along the Tornquist Zone as indicated by the continued outbuilding towards the Ringkoebing-Fyn High. A third event of relative uplift is indicated east of the study area by changes in the Pliocene outbuilding pattern. After the first event of uplift it appears that the deepest parts of the Eocene North Sea Basin was located more easterly than the deepest part are today. Apparently the two latest uplift events north and east of the study area were related to movements of, or along the Tornquist Zone or to regional uplift of the Fennoscandian Shield finally resulting in the present-day configuration of the North Sea. (au) 11 refs.

  8. Cenozoic thermal evolution of the central Sierra Nevada, California, from (U sbnd Th)/He thermochronometry (United States)

    House, M. A.; Wernicke, B. P.; Farley, K. A.; Dumitru, T. A.


    Apatite(U sbnd Th)/He cooling ages are reported for igneous apatite samples from the central Sierra Nevada and compared to published apatite fission track ages and track length data from the same mineral separates. Helium ages are youngest at low elevations and increase systematically toward higher elevations, ranging from 43 to 84 Ma at Yosemite Valley, 32 to 74 Ma at Kings River Canyon, and 23 to 75 Ma at Mt. Whitney. Helium ages from high elevation samples are generally concordant with corresponding fission track ages, while lower elevation helium ages are substantially younger. Cooling histories inferred from present laboratory derived fission track annealing and helium diffusion models do not match well, suggesting that either helium diffusion rates or fission track annealing rates are miscalibrated at temperatures below about 60°C for geologic exposure periods. Unlike the fission track results, the helium data do not indicate a very low geothermal gradient in the Sierra Nevada during early to middle Tertiary time.

  9. Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia). (United States)

    Solovyeva, Evgeniya N; Lebedev, Vladimir S; Dunayev, Evgeniy A; Nazarov, Roman A; Bannikova, Anna A; Che, Jing; Murphy, Robert W; Poyarkov, Nikolay A


    We hypothesize the phylogenetic relationships of the agamid genus Phrynocephalus to assess how past environmental changes shaped the evolutionary and biogeographic history of these lizards and especially the impact of paleogeography and climatic factors. Phrynocephalus is one of the most diverse and taxonomically confusing lizard genera. As a key element of Palearctic deserts, it serves as a promising model for studies of historical biogeography and formation of arid habitats in Eurasia. We used 51 samples representing 33 of 40 recognized species of Phrynocephalus covering all major areas of the genus. Molecular data included four mtDNA ( COI , ND2 , ND4 , Cytb ; 2,703 bp) and four nuDNA protein-coding genes ( RAG1 , BDNF , AKAP9 , NKTR ; 4,188 bp). AU-tests were implemented to test for significant differences between mtDNA- and nuDNA-based topologies. A time-calibrated phylogeny was estimated using a Bayesian relaxed molecular clock with nine fossil calibrations. We reconstructed the ancestral area of origin, biogeographic scenarios, body size, and the evolution of habitat preference. Phylogenetic analyses of nuDNA genes recovered a well-resolved and supported topology. Analyses detected significant discordance with the less-supported mtDNA genealogy. The position of Phrynocephalus mystaceus conflicted greatly between the two datasets. MtDNA introgression due to ancient hybridization best explained this result. Monophyletic Phrynocephalus contained three main clades: (I) oviparous species from south-western and Middle Asia; (II) viviparous species of Qinghai-Tibetan Plateau (QTP); and (III) oviparous species of the Caspian Basin, Middle and Central Asia. Phrynocephalus originated in late Oligocene (26.9 Ma) and modern species diversified during the middle Miocene (14.8-13.5 Ma). The reconstruction of ancestral areas indicated that Phrynocephalus originated in Middle East-southern Middle Asia. Body size miniaturization likely occurred early in the history of

  10. Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia

    Directory of Open Access Journals (Sweden)

    Evgeniya N. Solovyeva


    Full Text Available We hypothesize the phylogenetic relationships of the agamid genus Phrynocephalus to assess how past environmental changes shaped the evolutionary and biogeographic history of these lizards and especially the impact of paleogeography and climatic factors. Phrynocephalus is one of the most diverse and taxonomically confusing lizard genera. As a key element of Palearctic deserts, it serves as a promising model for studies of historical biogeography and formation of arid habitats in Eurasia. We used 51 samples representing 33 of 40 recognized species of Phrynocephalus covering all major areas of the genus. Molecular data included four mtDNA (COI, ND2, ND4, Cytb; 2,703 bp and four nuDNA protein-coding genes (RAG1, BDNF, AKAP9, NKTR; 4,188 bp. AU-tests were implemented to test for significant differences between mtDNA- and nuDNA-based topologies. A time-calibrated phylogeny was estimated using a Bayesian relaxed molecular clock with nine fossil calibrations. We reconstructed the ancestral area of origin, biogeographic scenarios, body size, and the evolution of habitat preference. Phylogenetic analyses of nuDNA genes recovered a well-resolved and supported topology. Analyses detected significant discordance with the less-supported mtDNA genealogy. The position of Phrynocephalus mystaceus conflicted greatly between the two datasets. MtDNA introgression due to ancient hybridization best explained this result. Monophyletic Phrynocephalus contained three main clades: (I oviparous species from south-western and Middle Asia; (II viviparous species of Qinghai–Tibetan Plateau (QTP; and (III oviparous species of the Caspian Basin, Middle and Central Asia. Phrynocephalus originated in late Oligocene (26.9 Ma and modern species diversified during the middle Miocene (14.8–13.5 Ma. The reconstruction of ancestral areas indicated that Phrynocephalus originated in Middle East–southern Middle Asia. Body size miniaturization likely occurred early in the history

  11. The pre-Cenozoic evolution of the Apuseni Mountains (Romania) in the light of new (thermo)geochronological data (United States)

    Reiser, Martin; Schuster, Ralf; Spikings, Richard; Tropper, Peter; Fügenschuh, Bernhard


    , although a possible minor influence of later normal faulting on the age distribution cannot be fully excluded and needs further evaluation. In contrast, fission track data show only minor differences between these two units (see Kounov and Schmid, 2012) and point to their mutual evolution since the late Upper Cretaceous. The known and exclusively brittle Cenozoic tectonic evolution did not substantially modify the pre-Cenozoic age (and thermal) pattern of the Tisza and Dacia units. References: Dallmeyer, R.D., Paná, D.I., Neubauer, F., & Erdmer, P. (1999): Tectonothermal Evolution of the Apuseni Mountains, Romania: Resolution of Variscan versus Alpine Events with 40Ar/39Ar Ages. Journal of Geology, 107: 329-352. Kounov, A and Schmid, S.M. (2012): Fission-track constraints on the thermal and tectonic evolution of the Apuseni Mountains (Romania). International Journal of Earth Sciences, DOI: 10.1007/s00531-012-0800-5. Schmid, S. M., D. Bernoulli, B. Fügenschuh, L. Matenco, S. Schaefer, R. Schuster, M. Tischler and K. Ustaszewski (2008): The Alps-Carpathians-Dinaridic orogenic system: correlation and evolution of tectonic units. Swiss Journal of Geosciences, 101, 139-18.

  12. Mesozoic and Cenozoic tectonics of the eastern and central Alaska Range: Progressive basin development and deformation in a suture zone

    Energy Technology Data Exchange (ETDEWEB)

    Ridgway, K.D.; Trop, J.M.; Nokleberg, W.J.; Davidson, C.M.; Eastham, K.R. [Purdue University, W. Lafayette, IN (United States). Dept. of Earth & Atmospheric Science


    Analysis of late Mesozoic and Cenozoic sedimentary basins, metamorphic rocks, and major faults in the eastern and central Alaska Range documents the progressive development of a suture zone that formed as a result of collision of an island-arc assemblage (the Wrangellia composite terrane) with the former North American continental margin. New basin-analysis, structural, and geochronologic data indicate the following stages in the development of the suture zone: (1) Deposition of 3-5 km of Upper Jurassic-Upper Cretaceous marine strata (the Kahiltna assemblage) recorded the initial collision of the island-arc assemblage with the continental margin. (2) Metamorphism of submarine-fan deposits of the Kahiltna basin, located near the leading edge of the island-arc assemblage, occurred at ca. 74 Ma, as determined from a new U-Pb zircon age for a synkinematic sill. (3) Shortening and exhumation of the suture zone peaked from 65 to 60 Ma on the basis of metamorphic and geochronologic data. (4) From 60 to 54 Ma, about 3 km of volcanic strata were deposited over deformed sedimentary strata of the Cantwell basin, and several granitic plutons (the McKinley sequence) were emplaced along the suture zone. (5) Following igneous activity, strike-slip displacement occurred from ca. 54 to 24 Ma along the Denali fault system, which had developed in the existing suture zone. (6) Regional transpressive shortening characterized the suture zone from ca. 24 Ma to the present. Regional subsidence resulted in Miocene coal seams up to 20 m thick and well-developed lacustrine deposits. Overlying the Miocene deposits are about 1.2 km of Pliocene and Holocene conglomeratic deposits. These mapping relationships provide evidence that regional shortening continues to the present in the eastern and central Alaska Range.

  13. Contourite drift off Madeira Island (Northeast Atlantic) and implications to Cenozoic bottom-current circulation (United States)

    Roque, Cristina; Hernández-Molina, F. Javier; Madureira, Pedro; Quartau, Rui; Magalhães, Vitor; Carrara, Gabriela; Santos de Campos, Aldino; Brandão, Filipe; Tomás Vázquez, Juan; Somoza, Luis


    best candidate for the build-up of Madeira Drift. Thus, the Madeira drift represents an exceptional sedimentary record in this sector of the Northeast Atlantic for the earliest phases of the proto-AABW water mass circulation. References: Bird, D.E., Hall, S.A., Burke, K., Casey, J.F., Sawyer, D.S. 2007. Early Central Atlantic Ocean seafloor spreading history. Geosphere, 3, 282-298. doi: 10.1130/GES00047.1 Hayes, D.E., Pimm, A.C., Beckmann, J.P., Benson, W.E., Berger, W.H., Roth, P.H., Supko,P.R., von Rad, U. (1978). Initial Reports, Site 136. doi:10.2973/dsdp.proc.14.1972

  14. Cenozoic structural evolution, thermal history, and erosion of the Ukrainian Carpathians fold-thrust belt (United States)

    Nakapelyukh, Mykhaylo; Bubniak, Ihor; Bubniak, Andriy; Jonckheere, Raymond; Ratschbacher, Lothar


    The Carpathians are part of the Alpine-Carpathian-Dinaridic orogen surrounding the Pannonian basin. Their Ukrainian part constitutes an ancient subduction-accretion complex that evolved into a foreland fold-thrust belt with a shortening history that was perpendicular to the orogenic strike. Herein, we constrain the evolution of the Ukrainian part of the Carpathian fold-thrust belt by apatite fission-track dating of sedimentary and volcanic samples and cross-section balancing and restoration. The apatite fission-track ages are uniform in the inner―southwestern part of the fold-thrust belt, implying post-shortening erosion since 12-10 Ma. The ages in the leading and trailing edges record provenance, i.e., sources in the Trans-European suture zone and the Inner Carpathians, respectively, and show that these parts of the fold-thrust were not heated to more than 100 °C. Syn-orogenic strata show sediment recycling: in the interior of the fold-thrust belt―the most thickened and most deeply eroded nappes―the apatite ages were reset, eroded, and redeposited in the syn-orogenic strata closer to the fore- and hinterland; the lag times are only a few million years. Two balanced cross sections, one constructed for this study and based on field and subsurface data, reveal an architecture characterized by nappe stacks separated by high-displacement thrusts; they record 340-390 km shortening. A kinematic forward model highlights the fold-thrust belt evolution from the pre-contractional configuration over the intermediate geometries during folding and thrusting and the post-shortening, erosional-unloading configuration at 12-10 Ma to the present-day geometry. Average shortening rates between 32-20 Ma and 20-12 Ma amounted to 13 and 21 km/Ma, respectively, implying a two-phased deformation of the Ukrainian fold-thrust belt.

  15. Late Jurassic – early Cretaceous inversion of rift structures, and linkage of petroleum system elements across post-rift unconformity, U.S. Chukchi Shelf, arctic Alaska (United States)

    Houseknecht, David W.; Connors, Christopher D.


    Basin evolution of the U.S. Chukchi shelf involved multiple phases, including Late Devonian–Permian rifting, Permian–Early Jurassic sagging, Late Jurassic–Neocomian inversion, and Cretaceous–Cenozoic foreland-basin development. The focus of ongoing exploration is a petroleum system that includes sag-phase source rocks; inversion-phase reservoir rocks; structure spanning the rift, sag, and inversion phases; and hydrocarbon generation during the foreland-basin phase.

  16. Along-strike structural variation and thermokinematic development of the Cenozoic Bitlis-Zagros fold-thrust belt, Turkey and Iraqi Kurdistan (United States)

    Barber, Douglas E.; Stockli, Daniel F.; Koshnaw, Renas I.; Tamar-Agha, Mazin Y.; Yilmaz, Ismail O.


    to latest Miocene times, followed by out-of-sequence development of the Mountain Front Flexure (Qaradagh anticline) by ~5 Ma. In contrast, initial exhumation in the northern Bitlis belt occurred by mid-Eocene time, followed by collisional deformation that propagated southward into northern Iraqi Kurdistan during the middle to late Miocene. Plio-Pleistocene deformation was partitioned into out-of-sequence reactivation of the Ora thrust along the Iraq-Turkey border, concurrent with development of the Sinjar and Abdulaziz inversion structures at the edge of the Bitlis deformation front. Overall, these data suggest the Bitlis and Zagros trends evolved relatively independently during Cretaceous and early Cenozoic times, resulting in very different structural and stratigraphic inheritance, before being affected contemporaneously by major phase of in-sequence shortening during middle to latest Miocene and out-of-sequence deformation since the Pliocene. Limited seismic sections corroborate the notion that the structural style and trend of the Bitlis fold belt is dominated by inverted Mesozoic extensional faults, whereas the Zagros structures are interpreted mostly as fault-propagation folds above a Triassic décollement. These pre-existing heterogeneities in the Bitlis contributed to the lower shortening estimates, variable anticline orientation, and irregular fold spacing and the fundamentally different orientations of the Zagros-Bitlis belt in Iraqi Kurdistan and Turkey.

  17. Late Cenozoic cooling history of the central Menderes Massif and the contribution of erosion to rock exhumation during active continental extension (United States)

    Nilius, Nils-Peter; Wölfler, Andreas; Heineke, Caroline; Glotzbach, Christoph; Hetzel, Ralf; Hampel, Andrea; Akal, Cüneyt; Dunkl, István


    The Menderes Massif constitutes the western part of the Anatolide belt in western Turkey and experienced a prolonged history of post-orogenic extension. A large amount of the extension was accommodated by the two oppositely dipping Gediz and Büyük Menderes detachment faults, which led to the exhumation of the central Menderes Massif (Gessner et al., 2013). Previous studies proposed a synchronous, bivergent exhumation of the central Menderes Massif since the Miocene (Gessner et al., 2001), although only the evolution of the north-dipping Gediz detachment is well constrained (Buscher et al., 2013). Detailed structural and thermochronological investigations from the south-dipping Büyük Menderes detachment have still been missing. Here we present results from different thermochronometers, which constrain the cooling and exhumation history of footwall and hanging wall rocks of the Büyük Menderes detachment. Our new zircon and apatite (U-Th)/He and fission track ages of footwall rocks from the Büyük Menderes detachment document two phases of increased cooling and exhumation (Wölfler et al., in revision). The first episode of increased footwall exhumation ( 0.9 km/Myr) occurred during the middle Miocene, followed by a second phase during latest Miocene and Pliocene ( 1.0 km/Myr). Apatite fission track ages yield a slip rate for the Pliocene movement along the Büyük Menderes detachment of 3.0 (+1.1/-0.6) km/Myr. Thermochronological data of hanging wall units reflect a slow phase of exhumation ( 0.2 km/Myr) in the late Oligocene and an increased exhumation rate of 1.0 km/Myr during the early to middle Miocene, when hanging wall units cooled below 80 °C. In comparison with the Gediz detachment, our thermochronological data from the Büyük Menderes detachment confirms the concurrent activity of both detachments during the late Miocene and Pliocene. With respect to the relative importance of normal faulting and erosion to rock exhumation, a comparison with 10Be

  18. Ductile bookshelf faulting: A new kinematic model for Cenozoic deformation in northern Tibet (United States)

    Zuza, A. V.; Yin, A.


    It has been long recognized that the most dominant features on the northern Tibetan Plateau are the >1000 km left-slip strike-slip faults (e.g., the Atyn Tagh, Kunlun, and Haiyuan faults). Early workers used the presence of these faults, especially the Kunlun and Haiyuan faults, as evidence for eastward lateral extrusion of the plateau, but their low documented offsets--100s of km or less--can not account for the 2500 km of convergence between India and Asia. Instead, these faults may result from north-south right-lateral simple shear due to the northward indentation of India, which leads to the clockwise rotation of the strike-slip faults and left-lateral slip (i.e., bookshelf faulting). With this idea, deformation is still localized on discrete fault planes, and 'microplates' or blocks rotate and/or translate with little internal deformation. As significant internal deformation occurs across northern Tibet within strike-slip-bounded domains, there is need for a coherent model to describe all of the deformational features. We also note the following: (1) geologic offsets and Quaternary slip rates of both the Kunlun and Haiyuan faults vary along strike and appear to diminish to the east, (2) the faults appear to kinematically link with thrust belts (e.g., Qilian Shan, Liupan Shan, Longmen Shan, and Qimen Tagh) and extensional zones (e.g., Shanxi, Yinchuan, and Qinling grabens), and (3) temporal relationships between the major deformation zones and the strike-slip faults (e.g., simultaneous enhanced deformation and offset in the Qilian Shan and Liupan Shan, and the Haiyuan fault, at 8 Ma). We propose a new kinematic model to describe the active deformation in northern Tibet: a ductile-bookshelf-faulting model. With this model, right-lateral simple shear leads to clockwise vertical axis rotation of the Qaidam and Qilian blocks, and left-slip faulting. This motion creates regions of compression and extension, dependent on the local boundary conditions (e.g., rigid

  19. Role of pre-existing structures in controlling the Cenozoic tectonic evolution of the eastern Tibetan plateau: New insights from analogue experiments (United States)

    Sun, Ming; Yin, An; Yan, Danping; Ren, Hongyu; Mu, Hongxu; Zhu, Lutao; Qiu, Liang


    Pre-existing weakness due to repeated tectonic, metamorphic, and magmatic events is a fundamental feature of the continental lithosphere on Earth. Because of this, continental deformation results from a combined effect of boundary conditions imposed by plate tectonic processes and heterogeneous and anisotropic mechanical strength inherited from protracted continental evolution. In this study, we assess how this interaction may have controlled the Cenozoic evolution of the eastern Tibetan plateau during the India-Asia collision. Specifically, we use analogue models to evaluate how the pre-Cenozoic structures may have controlled the location, orientation, and kinematics of the northwest-striking Xianshuihe and northeast-striking Longmen Shan fault zones, the two most dominant Cenozoic structures in eastern Tibet. Our best model indicates that the correct location, trend, and kinematics of the two fault systems can only be generated and maintained if the following conditions are met: (1) the northern part of the Songpan-Ganzi terrane in eastern Tibet has a strong basement whereas its southern part has a weak basement, (2) the northern strong basement consists of two pieces bounded by a crustal-scale weak zone that is expressed by the Triassic development of a northwest-trending antiform exposing middle and lower crustal rocks, and (3) the region was under persistent northeast-southwest compression since ∼35 Ma. Our model makes correct prediction on the sequence of deformation in eastern Tibet; the Longmen Shan right-slip transpressional zone was initiated first as an instantaneous response to the northeast-southwest compression, which is followed by the formation of the Xianshuihe fault about a half way after the exertion of northeast-southwest shortening in the model. The success of our model highlights the importance of pre-existing weakness, a key factor that has been largely neglected in the current geodynamic models of continental deformation.

  20. Cenozoic pulsed compression of Da'an-Dedu Fault Zone in Songliao Basin (NE China) and its implications for earthquake potential: Evidence from seismic data (United States)

    Yu, Zhongyuan; Zhang, Peizhen; Min, Wei; Wei, Qinghai; Zhao, Bin


    The Da'an-Dedu Fault Zone (DDFZ) is a major tectonic feature cutting through the Songliao Basin from south to north in NE China. Pulsed compression deformation of DDFZ during the Cenozoic implies a complex geodynamic process, and the latest stage of which occurred in the Quaternary directly influences the present seismicity of the interior basin. Although most of the evidence for Quaternary deformation about the Songliao Basin in the past decades was concentrated in marginal faults, all five earthquake swarms with magnitudes over 5.0 along the buried DDFZ with no surface expression during the past 30 years suggest it is a main seismogenic structure with seismic potential, which should deserve more attention of geologists. However, limited by the coverage of the Quaternary sedimentary and absence of strong historic and instrumental earthquakes records (M > 7), the geometric pattern, Quaternary activity and seismic potential of the DDFZ remain poorly understood. Thus, unlike previous geophysical studies focused on crust/mantle velocity structure across the fault and the aim of exploring possible mineral resources in the basin, in this study we have integrated a variety of the latest seismic data and drilling holes from petroleum explorations and shallow-depth seismic reflection profiles, to recognize the Cenozoic pulsed compression deformation of the DDFZ, and to discuss its implication for earthquake potential. The results show that at least four stages of compression deformation have occurred along the DDFZ in the Cenozoic: 65 Ma, 23 Ma, 5.3 Ma, and 1.8 Ma, respectively, although the geodynamic process behind which still in dispute. The results also imply that the tectonic style of the DDFZ fits well with the occurrence of modern seismic swarms. Moderate earthquake potential (M ≤ 7.0) is suggested along the DDFZ.

  1. Stratigraphy and Folding in the Cenozoic Cover of a Fold-Thrust Belt in the Nallıhan Region (Ankara, Central Turkey) (United States)

    Karaaǧaç, Serdal; Koral, Hayrettin


    This study investigates stratigraphy and structural features in the Cenozoic sedimentary sequence of the fold-thrust belt of the Nallıhan-Ankara region, located to the north of the İzmir-Ankara-Erzincan Suture Zone. Permian-Triassic age marble intercalated with schist-phyllites, the upper Jurassic-lower Cretaceous age limestone and the upper Cretaceous age sandstone-shale alternation compose the basement in the study area. These rocks are unconformably overlain by the Cenozoic age terrestrial sedimentary and volcanic units. The Cenozoic stratigraphy begins with the Paleocene-Eocene age coal-bearing, at times, volcanic intercalated conglomerate-sandstone-mudstone alternation of alluvial-fluvial origins (Aksaklar Formation) and the tuff intercalated with lacustrine limestone, bituminous limestone (Kabalar Formation). These units are conformably overlain by the Eocene age basalt-andesite and pyroclastic rocks (Meyildere volcanics). The Paleocene-Eocene aged units are unconformably overlain by the conglomerate-sandstone-mudstone-marl of a lower-middle Miocene lacustrine environment (Hançili Formation). The terrestrial conglomerate-sandstone alternation (Örencik Formation) is the youngest unit in the Cenozoic stratigraphy, and is assumed to be of Pliocene age based its stratigraphic position on older units. Field study shows existence of both folds and faults in the sedimentary cover. Stereographic projections of bedding measured in the field shows N25W/45NW and N60W/4SE-oriented fold axes in the Paleocene-Eocene age units. There are also N76W/12SE and N88E/8NE-oriented folds. The difference in fold-axis orientations suggests that some folds may have been rotated in blocks bound by faults during the post-Paleocene/Eocene period. Whereas, the lower-middle Miocene units manifest N88W/13SE-oriented fold axes. It is thus proposed that the observed difference in the azimuth of fold axes represent two different folding phases, one with NE-SW and the other with N

  2. Composition, peat-forming vegetation and kerogen paraffinicity of Cenozoic coals: Relationship to variations in the petroleum generation potential (Hydrogen Index)

    Energy Technology Data Exchange (ETDEWEB)

    Petersen, H.I.; Lindstroem, S.; Nytoft, H.P.; Rosenberg, P. [Geological Survey of Denmark and Greenland (GEUS), Oester Voldgade 10, DK-1350 Copenhagen (Denmark)


    Coals with similar thermal maturity and from the same deposit normally show a considerable range in petroleum generation potential as measured by the Hydrogen Index (HI). This variation may partly be related to variations in plant input to the precursor mires and organic matter preservation. It is widely accepted that some Cenozoic coals and coaly sediments have the potential to generate oil, which is related to the coal's paraffinicity. Coal paraffinicity is not readily reflected in the bulk HI. In this paper, the relationships between measured HI and coal composition, coal kerogen paraffinicity and floral input have been investigated in detail for three sets of coals from Colombia/Venezuela, Indonesia, and Vietnam. The samples in each coal set are largely of iso-rank. The petroleum generation potential was determined by Rock-Eval pyrolysis. Reflected light microscopy was used to analyse the organic matter (maceral) composition and the thermal maturity was determined by vitrinite reflectance (VR) measurements. The botanical affinity of pollen and spores was analysed by palynology. Coal kerogen paraffinicity was determined by ruthenium tetroxide-catalysed oxidation (RTCO) followed by chain length analysis and quantification (mg/g TOC) of the liberated aliphatic chains. The coals are dominated by huminite, in particular detrohuminite. Only the Vietnamese coals are rich in microscopically visible liptinite. The pollen and spores suggest that the coals were derived principally from complex angiosperm mire vegetations, with subordinate proportions of ferns that generally grew in a subtropical to tropical climate. Measured HI values vary considerably, but for the majority of the coals the values lie between approximately 200 mg HC/g TOC and 300 mg HC/g TOC. Aliphatics yielding monocarboxylic acids dominate in the coal kerogen, whereas aliphatics yielding dicarboxylic acids are secondary. However, the dicarboxylic acids show that cross-linking long-chain aliphatics

  3. Factors controlling late Cenozoic continental margin growth from the Ebro Delta to the western Mediterranean deep sea (United States)

    Nelson, C.H.; Maldonado, A.


    The Ebro continental margin sedimentation system originated with a Messinian fluvial system. This system eroded both a major subaerial canyon cutting the margin southeastward from the present Ebro Delta and an axial valley that drained northeastward down Valencia Trough. Post-Messinian submergence of this topography and the Pliocene regime of high sea levels resulted in a marine hemipelagic drape over the margin. Late Pliocene to Pleistocene glacial climatic cycles, drainagebasin deforestation, and sea-level lowstands combined to increase sediment supply, cause the margin to prograde, and create a regime of lowstand sediment-gravity flows in the deeper margin. The depositional patterns of regressive, transgressive and highstand sea-level regimes suggest that location of the sediment source near the present Ebro Delta throughout the late Cenozoic, southward current advection of sediment, and greater subsidence in the southern margin combined to cause generally asymmetric progradation of the margin to the southeast. Thicker, less stable deposits filling the Messinian subaerial canyon underwent multiple retrograde failures, eroded wide gullied canyons and formed unchanneled base-of-slope sediment aprons in the central margin area; other margin areas to the north and south developed a series of channel-levee complexes. On the basin floor, the formation of Valencia Valley over the Messinian subaerial valley and earlier faults led to draining of about 20% of the Ebro Pleistocene sediment from channel-levee complexes through the valley to prograde Valencia Fan as much as 500 km northeast of the margin. Thus, the Ebro margin has two growth directions, mainly southeastward during higher sea levels, and eastward to northeastward during lower sea levels. The northeastward draining of turbidity currents has produced unusually thin and widely dispersed turbidite systems compared to those on ponded basin floors. During the past few centuries, man's impact has exceeded natural

  4. Cenozoic mantle composition evolution of southern Tibet indicated by Paleocene ( 64 Ma) pseudoleucite phonolitic rocks in central Lhasa terrane (United States)

    Qi, Yue; Gou, Guo-Ning; Wang, Qiang; Wyman, Derek A.; Jiang, Zi-Qi; Li, Qiu-Li; Zhang, Le


    The question of whether continental subduction processes in collisional orogenic belts can trigger wide-spread mantle metesomatism and crustal material recycling remains unresolved. Miocene (25-8 Ma) ultrapotassic rocks in southern Tibet are the only mantle-derived magmatic rocks emplaced after the collision between India and Asia and they have been linked to the onset of east-west extensional stresses as the surface uplift of the Tibetan Plateau reached near-maximum elevation. However, their petrogenesis remains highly controversial, particularly the issue of whether their extremely enriched Sr-Nd isotopic characteristics were related to metasomatism derived from subducted Indian continental materials during the Cenozoic. Here we report on a Paleocene silicate-unsaturated, pseudoleucite phonolitic dike, in the Rongniduo area of central Lhasa terrane. In-situ SIMS (secondary ion mass spectrometry) apatite U-Pb age indicates the dike was generated at 64.1 ± 4.2 Ma, which slightly predates the age of initial India and Asia collision (about 55-50 Ma). This is the oldest age yet reported for ultrapotassic rocks in southern Tibet. Samples from this dike have distinctly more depleted Sr-Nd (whole rock: (87Sr/86Sr)i = 0.7064 to 0.7062, εNd(t) = - 1.5 to 0.4; in situ apitite: (87Sr/86Sr)i = 0.7059 to 0.7060, εNd(t) = - 2.0 to 0.4) isotopic compositions, than those of Miocene (25-8 Ma) ultrapotassic rocks in the central Lhasa terrane ((87Sr/86Sr)i = 0.7106 to 0.7399, εNd(t) = - 10.6 to - 18.5). Our new data provides important constraints on pre-collisional mantle characteristics beneath the Lhasa terrane. We suggest that these 64 Ma pseudoleucite phonolitic rocks were derived from the enriched lithospheric mantle metasomatized by subducted Tethyan oceanic materials in response to Neo-Tethyan slab roll-back. As a consequence, the younger Miocene ultrapotassic rocks, which display different geochemical compositions from the pre-collisional ultrapotassic rocks, were most

  5. Cenozoic Structural and Stratigraphic Evolution of the Ulukışla and Sivas Basins (Central and Eastern Turkey) (United States)

    Gürer, Derya; Darin, Michael H.; van Hinsbergen, Douwe J. J.; Umhoefer, Paul J.


    time, the Ecemiş fault zone has been active as an extensional structure responsible for the re-exhumation of the Niǧde Massif in its footwall. To the east and in front of the Arabian indenter, the Sivas Basin evolved during Paleogene collision of the Tauride micro-continent (Africa) with the Pontides (Eurasia), but prior to Arabia collision. The thin-skinned SSFTB is a >300 km-long by 30 km-wide E-W-elongate, convex-north arcuate belt of compressional structures in Late Cretaceous to Miocene strata. It is characterized by NE- to E-trending upright folds with slight northward asymmetry, south-dipping thrust faults, and overturned folds in Paleogene strata indicating predominantly northward vergence. Several thrusts are south-vergent, typically displacing younger (Miocene) units. Structural relationships and AFT data reveal a sequence of initial crustal shortening and rapid exhumation in the late Eocene and Oligocene, an early-middle Miocene phase of relative tectonic quiescence and regional unconformity development, and a final episode of contraction during the late Miocene. Pliocene and younger units are only locally deformed by either halokinesis or transpression along diffuse and low-strain faults. Paleomagnetic data from the SSFTB reveal significant counter-clockwise rotations since Eocene time. Miocene strata north of the SSFTB consistently show moderate clockwise rotations. Our results indicate that collision-related growth of the orogen ended by the latest Miocene, coeval with or shortly after initiation of the North Anatolian fault zone.

  6. Late Cenozoic basin evolution and fold-thrust deformation in the southern Central Andes: Initial constraints from synorogenic deposits of the Precordillera, Argentina (United States)

    Levina, M.; Horton, B. K.; Fuentes, F.; Stockli, D. F.


    In the Precordillera region of the Argentine Andes, Cenozoic shortening associated with flattening of the Pampean segment of the subducting Nazca plate has resulted in a series of thin skinned fold-thrust systems that partitioned and uplifted Cenozoic foreland basin deposits. The kinematic and temporal evolution of the Andean Precordillera can be approached through detailed analyses of the sedimentary fill now preserved in intermontane regions and the bedrock low-temperature thermochronology of the fold-thrust belt. In this project, we focus on Neogene foreland basin fill exposed in the central and eastern Precordillera along the San Juan River (Quebrada Albarracín and Pachaco regions), on the western flank of the Sierra Talacasto, and in the Loma de las Tapias area near the Ullum dam. The sedimentary successions exposed in these regions record the hinterland development of the Frontal Cordillera (detrital zircon provenance and composition of sandstone and conglomeratic units), regional volcanism (pyroclastic flows and tuffaceous sandstone units), and initial construction of the Precordillera (fault cutoff relationships, growth strata, and paleocurrent changes). We investigate the development and subsequent partitioning and deformation of these synorogenic sections using sediment provenance (detrital zircon U-Pb geochronology, conglomerate clast counts, sandstone petrography, and paleocurrent measurements), facies analysis of measured stratigraphic successions, and initial apatite (U-Th)/He cooling histories to constrain the age of uplift-induced exhumation of successive thrust sheets in the Andean Precordillera.

  7. GIS database and discussion for the distribution, composition, and age of Cenozoic volcanic rocks of the Pacific Northwest Volcanic Aquifer System study area (United States)

    Sherrod, David R.; Keith, Mackenzie K.


    A substantial part of the U.S. Pacific Northwest is underlain by Cenozoic volcanic and continental sedimentary rocks and, where widespread, these strata form important aquifers. The legacy geologic mapping presented with this report contains new thematic categorization added to state digital compilations published by the U.S. Geological Survey for Oregon, California, Idaho, Nevada, Utah, and Washington (Ludington and others, 2005). Our additional coding is designed to allow rapid characterization, mainly for hydrogeologic purposes, of similar rocks and deposits within a boundary expanded slightly beyond that of the Pacific Northwest Volcanic Aquifer System study area. To be useful for hydrogeologic analysis and to be more statistically manageable, statewide compilations from Ludington and others (2005) were mosaicked into a regional map and then reinterpreted into four main categories on the basis of (1) age, (2) composition, (3) hydrogeologic grouping, and (4) lithologic pattern. The coding scheme emphasizes Cenozoic volcanic or volcanic-related rocks and deposits, and of primary interest are the codings for composition and age.

  8. Quantitative proteomic analysis of HIV-1 infected CD4+ T cells reveals an early host response in important biological pathways: Protein synthesis, cell proliferation, and T-cell activation

    Energy Technology Data Exchange (ETDEWEB)

    Navare, Arti T.; Sova, Pavel; Purdy, David E.; Weiss, Jeffrey M. [Department of Microbiology, University of Washington, Seattle, WA (United States); Wolf-Yadlin, Alejandro [Department of Genome Sciences, University of Washington, Seattle, WA (United States); Korth, Marcus J.; Chang, Stewart T.; Proll, Sean C. [Department of Microbiology, University of Washington, Seattle, WA (United States); Jahan, Tahmina A. [Proteomics Resource, UW Medicine at South Lake Union, Seattle, WA (United States); Krasnoselsky, Alexei L.; Palermo, Robert E. [Department of Microbiology, University of Washington, Seattle, WA (United States); Katze, Michael G., E-mail: [Department of Microbiology, University of Washington, Seattle, WA (United States); Washington National Primate Research Center, University of Washington, Seattle, WA (United States)


    Human immunodeficiency virus (HIV-1) depends upon host-encoded proteins to facilitate its replication while at the same time inhibiting critical components of innate and/or intrinsic immune response pathways. To characterize the host cell response on protein levels in CD4+ lymphoblastoid SUP-T1 cells after infection with HIV-1 strain LAI, we used mass spectrometry (MS)-based global quantitation with iTRAQ (isobaric tag for relative and absolute quantification). We found 266, 60 and 22 proteins differentially expressed (DE) (P-value{<=}0.05) at 4, 8, and 20 hours post-infection (hpi), respectively, compared to time-matched mock-infected samples. The majority of changes in protein abundance occurred at an early stage of infection well before the de novo production of viral proteins. Functional analyses of these DE proteins showed enrichment in several biological pathways including protein synthesis, cell proliferation, and T-cell activation. Importantly, these early changes before the time of robust viral production have not been described before.

  9. A nearly modern amphibious bird from the Early Cretaceous of northwestern China. (United States)

    You, Hai-Lu; Lamanna, Matthew C; Harris, Jerald D; Chiappe, Luis M; O'connor, Jingmai; Ji, Shu-An; Lü, Jun-Chang; Yuan, Chong-Xi; Li, Da-Qing; Zhang, Xing; Lacovara, Kenneth J; Dodson, Peter; Ji, Qiang


    Three-dimensional specimens of the volant fossil bird Gansus yumenensis from the Early Cretaceous Xiagou Formation of northwestern China demonstrate that this taxon possesses advanced anatomical features previously known only in Late Cretaceous and Cenozoic ornithuran birds. Phylogenetic analysis recovers Gansus within the Ornithurae, making it the oldest known member of the clade. The Xiagou Formation preserves the oldest known ornithuromorph-dominated avian assemblage. The anatomy of Gansus, like that of other non-neornithean (nonmodern) ornithuran birds, indicates specialization for an amphibious life-style, supporting the hypothesis that modern birds originated in aquatic or littoral niches.

  10. Cool episodes in Early Tertiary Arctic climate: Evidence from Svalbard (United States)

    Spielhagen, R. F.; Tripati, A.


    The Arctic is a climatically sensitive and important region. However, very little is known about the climatic and oceanographic evolution of the area, particularly prior to the Neogene. Until recently, the Arctic was assumed to be characterized by relatively warm conditions during the early Cenozoic. The Early Tertiary sedimentary sequence on Svalbard contains several layers with coal seams and broad-leaved plants which were commonly accepted as indicators of a generally temperate-warm climate. Here we report on the intermittent occurrence of certain temperature indicators in the succession, which may represent the first northern high-latitude record of near-freezing temperatures for the early Cenozoic. Besides the findings of probably ice-rafted erratic clasts in the Paleocene and Eocene sandstones and shales, we note especially the occurrence of glendonites which are pseudomorphs of calcite after ikaite (calcium carbonate hexahydrate). We measured the chemical composition of Svalbard glendonites which is almost identical to that of similar pseudomorphs from the Lower Cretaceaous of Northern Canada. Mass spectrometric analyses of the glendonite calcite gave very low carbon isotope values. These values suggest a provenance of the calcium carbonate from marine organic carbon and connect our glendonites to the precursor mineral ikaite which has similar low values. Since a variety of studies has demonstrated that ikaite is stable only at temperatures close to freezing point, we have to infer low temperatures also for the deepositional environment of which the sediments were deposited that now hold glendonites. These results imply the occurrence of cooling phases episodically during the warm background climate of the Paleocene and Eocene, suggesting that temperature variability was much greater than previously recognized.

  11. Mesozoic and Cenozoic tectonics of the eastern and central Alaska Range: Progressive basin development and deformation in a suture zone (United States)

    Ridgway, K.D.; Trop, J.M.; Nokleberg, W.J.; Davidson, C.M.; Eastham, K.R.


    Analysis of late Mesozoic and Cenozoic sedimentary basins, metamorphic rocks, and major faults in the eastern and central Alaska Range documents the progressive development of a suture zone that formed as a result of collision of an island-arc assemblage (the Wrangellia composite terrane) with the former North American continental margin. New basin-analysis, structural, and geochronologic data indicate the following stages in the development of the suture zone: (1) Deposition of 3-5 km of Upper Jurassic-Upper Cretaceous marine strata (the Kahiltna assemblage) recorded the initial collision of the island-arc assemblage with the continental margin. The Kahiltna assemblage exposed in the northern Talkeetna Mountains represents a Kimmeridgian-Valanginian backarc basin that was filled by northwestward-flowing submarine-fan systems that were transporting sediment derived from Mesozoic strata of the island-arc assemblage. The Kahiltna assemblage exposed in the southern Alaska Range represents a Valanginian-Cenomanian remnant ocean basin filled by west-southwestward-flowing submarine-fan systems that were transporting sediment derived from Paleozoic continental-margin strata uplifted in the along-strike suture zone. A belt of retrograde metamorphism and a regional anticlinorium developed along the continental margin from 115 to 106 Ma, roughly coeval with the end of widespread deposition in the Kahiltna sedimentary basins. (2) Metamorphism of submarine-fan deposits of the Kahiltna basin, located near the leading edge of the island-arc assemblage, occurred at ca. 74 Ma, as determined from a new U-Pb zircon age for a synkinematic sill. Coeval with metamorphism of deposits of the Kahiltna basin in the southern part of the suture zone was development of a thrust-top basin, the Cantwell basin, in the northern part of the suture zone. Geologic mapping and compositional data suggest that the 4 km of Upper Cretaceous nonmarine and marginal marine sedimentary strata in this basin

  12. Mesozoic-Cenozoic evolution of the Zoige depression in the Songpan-Ganzi flysch basin, eastern Tibetan Plateau: Constraints from detrital zircon U-Pb ages and fission-track ages of the Triassic sedimentary sequence (United States)

    Tang, Yan; Zhang, Yunpeng; Tong, Lili


    The Zoige depression is an important depocenter within the northeast Songpan-Ganzi flysch basin, which is bounded by the South China, North China and Qiangtang Blocks and forms the northeastern margin of the Tibetan Plateau. This paper discusses the sediment provenance and Mesozoic-Cenozoic evolution of the Zoige depression in the Songpan-Ganzi flysch basin, eastern Tibetan Plateau, using the detrital zircon U-Pb ages and apatite fission-track data from the Middle to Late Triassic sedimentary rocks in the area. The U-Pb ages of the Middle to Late Triassic zircons range from 260-280 Ma, 429-480 Ma, 792-974 Ma and 1800-2500 Ma and represent distinct source region. Our new results demonstrate that the detritus deposited during the Middle Triassic (Ladinian, T2zg) primarily originated from the Eastern Kunlun and North Qinling Orogens, with lesser contributions from the North China Block. By the Late Triassic (early Carnian, T3z), the materials at the southern margin of the North China Block were generally transported westward to the basin along a river network that flowed through the Qinling region between the North China and South China Blocks: this interpretation is supported by the predominance of the bimodal distribution of 1.8 Ga and 2.5 Ga age peaks and a lack of significant Neoproterozoic zircon. Since the Late Triassic (middle Carnian, T3zh), considerable changes have occurred in the source terranes, such as the cessation of the Eastern Kunlun Orogen and North China Block sources and the rise of the northwestern margin of the Yangtze Block and South Qinling Orogen. These drastic changes are compatible with a model of a sustained westward collision between the South China and North China Blocks during the late Triassic and the clockwise rotation of the South China Block progressively closed the basin. Subsequently, orogeny-associated folds have formed in the basin since the Late Triassic (late Carnian), and the study area was generally subjected to uplifting and

  13. Discovery of Miocene adakitic dacite from the Eastern Pontides Belt (NE Turkey) and a revised geodynamic model for the late Cenozoic evolution of the Eastern Mediterranean region (United States)

    Eyuboglu, Yener; Santosh, M.; Yi, Keewook; Bektaş, Osman; Kwon, Sanghoon


    The Cenozoic magmatic record within the ca. 500 km long eastern Pontides orogen, located within the Alpine metallogenic belt, is critical to evaluate the tectonic history and geodynamic evolution of the eastern Mediterranean region. In this paper we report for the first time late Miocene adakitic rocks from the southeastern part of the eastern Pontides belt and present results from geochemical and Sr-Nd isotopic studies as well as zircon U-Pb geochronology. The Tavdagi dacite that we investigate in this study is exposed as round or ellipsoidal shaped bodies, sills, and dikes in the southeastern part of the belt. Zircons in the dacite show euhedral crystal morphology with oscillatory zoning and high Th/U values (up to 1.69) typical of magmatic origin. Zircon LA-ICPMS analysis yielded a weighted mean 206Pb/238U age of 7.86 ± 0.15 Ma. SHRIMP analyses of zircons with typical magmatic zoning from another sample yielded a weighted mean 206Pb/238U age of 8.79 ± 0.19 Ma. Both ages are identical and constrain the timing of dacitic magmatism as late Miocene. The Miocene Tavdagi dacite shows adakitic affinity with high SiO2 (68.95-71.41 wt.%), Al2O3 (14.88-16.02 wt.%), Na2O (3.27-4.12 wt.%), Sr (331.4-462.1 ppm), Sr/Y (85-103.7), LaN/YbN (34.3-50.9) and low Y (3.2-5 ppm) values. Their initial 143Nd/144Nd (0.512723-0.512736) and 87Sr/86Sr (0.70484-0.70494) ratios are, respectively, lower and higher than those of normal oceanic crust. The geological, geochemical and isotopic data suggest that the adakitic magmatism was generated by partial melting of the mafic lower crust in the southeastern part of the eastern Pontide belt during the late Miocene. Based on the results presented in this study and a synthesis of the geological and tectonic information on the region, we propose that the entire northern edge of the eastern Pontides-Lesser Caucasus-Elbruz magmatic arc was an active continental margin during the Cenozoic. We identify a migration of the Cenozoic magmatism towards

  14. Radioactive particles revealed by electron microscopy. Chemical and physical properties of radioactive particles in aerosol samples emitted during the early stage of Fukushima Dai-ichi Nuclear Power Plant accident

    International Nuclear Information System (INIS)

    Adachi, Kouji


    Water-insoluble radioactive materials emitted during an early stage of the Fukushima Dai-ichi Nuclear Power Plant accident in 2011 were identified, and their chemical and physical properties were characterized as particulate matters. In this report, studies on radioactive particles collected from filter samples in Tsukuba on March 14–15, 2011 are summarized. Their compositions, chemical states, sizes, shapes, crystallinity, and hygroscopicity were analyzed using microscopic analyses such as electron microscopy and synchrotron with a micro-beam. The results indicate that they include Cs, Fe, and Zn as well as elements from fission products and are water insoluble, spherical-glassy particles with ca. 2 micrometer in size. Understanding of their detailed properties is significant to improve the numerical models during the accident and to understand their occurrences in soil as well as the accident itself. In addition to the water-insoluble radioactive materials, water-soluble radioactive materials, which were likely emitted in different events during the accident, should be investigated to have comprehensive understanding of the accident and its environmental effects. More samples from various environments such as soil will be needed, and more detailed chemical and physical analyses will help to understand their formation process, influences on human health, and long term decrements in ambient conditions. (author)

  15. Early transcriptomic changes induced by magnesium deficiency in Arabidopsis thaliana reveal the alteration of circadian clock gene expression in roots and the triggering of abscisic acid-responsive genes. (United States)

    Hermans, Christian; Vuylsteke, Marnik; Coppens, Frederik; Craciun, Adrian; Inzé, Dirk; Verbruggen, Nathalie


    *Plant growth and development ultimately depend on environmental variables such as the availability of essential minerals. Unravelling how nutrients affect gene expression will help to understand how they regulate plant growth. *This study reports the early transcriptomic response to magnesium (Mg) deprivation in Arabidopsis. Whole-genome transcriptome was studied in the roots and young mature leaves 4, 8 and 28 h after the removal of Mg from the nutrient solution. *The highest number of regulated genes was first observed in the roots. Contrary to other mineral deficiencies, Mg depletion did not induce a higher expression of annotated genes in Mg uptake. Remarkable responses include the perturbation of the central oscillator of the circadian clock in roots and the triggering of abscisic acid (ABA) signalling, with half of the up-regulated Mg genes in leaves being ABA-responsive. However, no change in ABA content was observed. *The specificity of the response of some Mg-regulated genes was challenged by studying their expression after other mineral deficiencies and environmental stresses. The possibility to develop markers for Mg incipient deficiency is discussed here.

  16. Three-Dimensional Spatiotemporal Modeling of Colon Cancer Organoids Reveals that Multimodal Control of Stem Cell Self-Renewal is a Critical Determinant of Size and Shape in Early Stages of Tumor Growth. (United States)

    Yan, Huaming; Konstorum, Anna; Lowengrub, John S


    We develop a three-dimensional multispecies mathematical model to simulate the growth of colon cancer organoids containing stem, progenitor and terminally differentiated cells, as a model of early (prevascular) tumor growth. Stem cells (SCs) secrete short-range self-renewal promoters (e.g., Wnt) and their long-range inhibitors (e.g., Dkk) and proliferate slowly. Committed progenitor (CP) cells proliferate more rapidly and differentiate to produce post-mitotic terminally differentiated cells that release differentiation promoters, forming negative feedback loops on SC and CP self-renewal. We demonstrate that SCs play a central role in normal and cancer colon organoids. Spatial patterning of the SC self-renewal promoter gives rise to SC clusters, which mimic stem cell niches, around the organoid surface, and drive the development of invasive fingers. We also study the effects of externally applied signaling factors. Applying bone morphogenic proteins, which inhibit SC and CP self-renewal, reduces invasiveness and organoid size. Applying hepatocyte growth factor, which enhances SC self-renewal, produces larger sizes and enhances finger development at low concentrations but suppresses fingers at high concentrations. These results are consistent with recent experiments on colon organoids. Because many cancers are hierarchically organized and are subject to feedback regulation similar to that in normal tissues, our results suggest that in cancer, control of cancer stem cell self-renewal should influence the size and shape in similar ways, thereby opening the door to novel therapies.

  17. Expression profiling of migrated and invaded breast cancer cells predicts early metastatic relapse and reveals Krüppel-like factor 9 as a potential suppressor of invasive growth in breast cancer (United States)

    Limame, Ridha; de Beeck, Ken Op; Van Laere, Steven; Croes, Lieselot; De Wilde, Annemieke; Dirix, Luc; Van Camp, Guy; Peeters, Marc; De Wever, Olivier; Lardon, Filip; Pauwels, Patrick


    Cell motility and invasion initiate metastasis. However, only a subpopulation of cancer cells within a tumor will ultimately become invasive. Due to this stochastic and transient nature, in an experimental setting, migrating and invading cells need to be isolated from the general population in order to study the gene expression profiles linked to these processes. This report describes microarray analysis on RNA derived from migrated or invaded subpopulations of triple negative breast cancer cells in a Transwell set-up, at two different time points during motility and invasion, pre-determined as “early” and “late” in real-time kinetic assessments. Invasion- and migration-related gene expression signatures were generated through comparison with non-invasive cells, remaining at the upper side of the Transwell membranes. Late-phase signatures of both invasion and migration indicated poor prognosis in a series of breast cancer data sets. Furthermore, evaluation of the genes constituting the prognostic invasion-related gene signature revealed Krüppel-like factor 9 (KLF9) as a putative suppressor of invasive growth in breast cancer. Next to loss in invasive vs non-invasive cell lines, KLF9 also showed significantly lower expression levels in the “early” invasive cell population, in several public expression data sets and in clinical breast cancer samples when compared to normal tissue. Overexpression of EGFP-KLF9 fusion protein significantly altered morphology and blocked invasion and growth of MDA-MB-231 cells in vitro. In addition, KLF9 expression correlated inversely with mitotic activity in clinical samples, indicating anti-proliferative effects. PMID:25593984

  18. Somatic mutations, allele loss, and DNA methylation of the Cub and Sushi Multiple Domains 1 (CSMD1 gene reveals association with early age of diagnosis in colorectal cancer patients.

    Directory of Open Access Journals (Sweden)

    Austin Y Shull

    Full Text Available The Cub and Sushi Multiple Domains 1 (CSMD1 gene, located on the short arm of chromosome 8, codes for a type I transmembrane protein whose function is currently unknown. CSMD1 expression is frequently lost in many epithelial cancers. Our goal was to characterize the relationships between CSMD1 somatic mutations, allele imbalance, DNA methylation, and the clinical characteristics in colorectal cancer patients.We sequenced the CSMD1 coding regions in 54 colorectal tumors using the 454FLX pyrosequencing platform to interrogate 72 amplicons covering the entire coding sequence. We used heterozygous SNP allele ratios at multiple CSMD1 loci to determine allelic balance and infer loss of heterozygosity. Finally, we performed methylation-specific PCR on 76 colorectal tumors to determine DNA methylation status for CSMD1 and known methylation targets ALX4, RUNX3, NEUROG1, and CDKN2A.Using 454FLX sequencing and confirming with Sanger sequencing, 16 CSMD1 somatic mutations were identified in 6 of the 54 colorectal tumors (11%. The nonsynonymous to synonymous mutation ratio of the 16 somatic mutations was 15:1, a ratio significantly higher than the expected 2:1 ratio (p = 0.014. This ratio indicates a presence of positive selection for mutations in the CSMD1 protein sequence. CSMD1 allelic imbalance was present in 19 of 37 informative cases (56%. Patients with allelic imbalance and CSMD1 mutations were significantly younger (average age, 41 years than those without somatic mutations (average age, 68 years. The majority of tumors were methylated at one or more CpG loci within the CSMD1 coding sequence, and CSMD1 methylation significantly correlated with two known methylation targets ALX4 and RUNX3. C:G>T:A substitutions were significantly overrepresented (47%, suggesting extensive cytosine methylation predisposing to somatic mutations.Deep amplicon sequencing and methylation-specific PCR reveal that CSMD1 alterations can correlate with earlier clinical

  19. Genomic Analysis of Uterine Lavage Fluid Detects Early Endometrial Cancers and Reveals a Prevalent Landscape of Driver Mutations in Women without Histopathologic Evidence of Cancer: A Prospective Cross-Sectional Study.

    Directory of Open Access Journals (Sweden)

    Navya Nair


    Full Text Available Endometrial cancer is the most common gynecologic malignancy, and its incidence and associated mortality are increasing. Despite the immediate need to detect these cancers at an earlier stage, there is no effective screening methodology or protocol for endometrial cancer. The comprehensive, genomics-based analysis of endometrial cancer by The Cancer Genome Atlas (TCGA revealed many of the molecular defects that define this cancer. Based on these cancer genome results, and in a prospective study, we hypothesized that the use of ultra-deep, targeted gene sequencing could detect somatic mutations in uterine lavage fluid obtained from women undergoing hysteroscopy as a means of molecular screening and diagnosis.Uterine lavage and paired blood samples were collected and analyzed from 107 consecutive patients who were undergoing hysteroscopy and curettage for diagnostic evaluation from this single-institution study. The lavage fluid was separated into cellular and acellular fractions by centrifugation. Cellular and cell-free DNA (cfDNA were isolated from each lavage. Two targeted next-generation sequencing (NGS gene panels, one composed of 56 genes and the other of 12 genes, were used for ultra-deep sequencing. To rule out potential NGS-based errors, orthogonal mutation validation was performed using digital PCR and Sanger sequencing. Seven patients were diagnosed with endometrial cancer based on classic histopathologic analysis. Six of these patients had stage IA cancer, and one of these cancers was only detectable as a microscopic focus within a polyp. All seven patients were found to have significant cancer-associated gene mutations in both cell pellet and cfDNA fractions. In the four patients in whom adequate tumor sample was available, all tumor mutations above a specific allele fraction were present in the uterine lavage DNA samples. Mutations originally only detected in lavage fluid fractions were later confirmed to be present in tumor but at

  20. Late Cenozoic tephrochronology, stratigraphy, geomorphology, and neotectonics of the Western Black Mountains Piedmont, Death Valley, California: Implications for the spatial and temporal evolution of the Death Valley fault zone (United States)

    Knott, Jeffrey Rayburn

    This study presents the first detailed tephrochronologic study of the central Death Valley area by correlation of a Nomlaki-like tuff (>3.35 Ma), tuffs of the Mesquite Spring family (3.1 -- 3.35 Ma), a tuff of the lower Glass Mountain family (1.86 -- 2.06 Ma), and tephra layers from the upper Glass Mountain family (0.8 -- 1.2 Ma), the Bishop ash bed (0.76 Ma), the Lava Creek B ash bed (~0.66 Ma), and the Dibekulewe ash bed (~0.51 Ma). Correlation of these tuffs and tephra layers provides the first reliable numeric-age stratigraphy for late Cenozoic alluvial fan and lacustrine deposits for Death Valley and resulted in the naming of the informal early to middle Pleistocene Mormon Ploint formation. Using the numeric-age stratigraphy, the Death Valley fault zone (DVFZ) is interpreted to have progressively stepped basinward since the late Pliocene at Mormon Point and Copper Canyon. The Mormon Point turtleback or low-angle normal fault is shown to have unequivocal late Quaternary slip at its present low angle dip. Tectonic geomorphic analysis indicates that the (DVFZ) is composed of five geomorphic segments with the most persistent segment boundaries being the en-echelon step at Mormon Point and the bedrock salient at Artists Drive. Subsequent geomorphic studies resulting from the numeric-age stratigraphy and structural relations include application of Gilberts field criteria to the benches at Mormon Point indicating that the upper bench is a lacustrine strandline and the remaining topographically-lower benches are fault scarps across the 160--185 ka lake abrasion platform. In addition, the first known application of cosmogenic 10Be and 26Al exposure dating to a rock avalanche complex south of Badwater yielded an age of 29.5 +/- 1.9 ka for the younger avalanche. The 28 meter offset of the older avalanche may be interpreted as post-160--185 ka yielding a 0.1 mm/year slip rate, or post-29.5 +/- 1.9 ka yielding a maximum slip rate of 0.9 nun/year for the DVFZ. A consequence

  1. Detrital zircon U-Pb and (U-Th)/He double-dating of Upper Cretaceous-Cenozoic Zagros foreland basin strata in the Kurdistan Region of northern Iraq (United States)

    Barber, D. E.; Stockli, D. F.; Koshnaw, R. I.; Horton, B. K.; Tamar-Agha, M. Y.; Kendall, J. J.


    The NW Zagros orogen is the result of the multistage collisional history associated with Late Cretaceous-Cenozoic convergence of the Arabian and Eurasian continents and final closure of Neotethys. Siliciclastic strata preserved within a ~400 km segment of the NW Zagros fold-thrust belt and foreland basin in the Iraqi Kurdistan Region (IKR) provide a widespread record of exhumation and sedimentation. As a means of assessing NW Zagros foreland basin evolution and chronostratigraphy, we present coupled detrital zircon (DZ) U-Pb and (U-Th)/He geo-thermochronometric data of Upper Cretaceous to Pliocene siliciclastic strata from the Duhok, Erbil, and Suleimaniyah provinces of IKR. LA-ICP-MS U-Pb age analyses reveal that the foreland basin fill in IKR in general was dominantly derived from Pan-African/Arabian-Nubian, Peri-Gondwandan, Eurasian, and Cretaceous volcanic arc terrenes. However, the provenance of these strata varies systematically along strike and through time, with an overall increase in complexity upsection. DZ age distribution of Paleocene-Eocene strata is dominated by a ~95 Ma grain age population, likely sourced from the Late Cretaceous Hassanbag-Bitlis volcanic arc complex along the northern margin of Arabia. In contrast, DZ U-Pb age distributions of Neogene strata show a major contribution derived from various Eurasian (e.g., Iranian, Tauride, Pontide; ~45, 150, 300 Ma) and Pan-African (~550, 950 Ma) sources. The introduction of Eurasian DZ ages at the Paleogene-Neogene transition likely records the onset of Arabian-Eurasian collision. Along strike to the southeast, the DZ U-Pb spectra of Neogene strata show a decreased percentage of Pan-African, Peri-Gondwandan, Tauride, and Ordovician ages, coupled with a dramatic increase in 40-50 Ma DZ ages that correspond to Urumieh-Dokhtar magmatic rocks in Iran. Combined with paleocurrent data, this suggests that Neogene sediments were transported longitudinally southeastward through an unbroken foreland basin

  2. Post Cretaceous cooling trend documented in the gastropods (Turritella Sp.) from the Cenozoic startigraphic successions of India (United States)

    Banerjee, Y.; Ghosh, P.; Halder, K.; Malarkodi, N.; Pathak, P.


    The aftermath of the Himalyan orogeny and subsequent cooling is documented in the deep sea sedimentary record from the Oceanic realm (1). Here we attempt to reconstruct the temperature pattern based on marine gastropods i.e. Turritella sp. which became abundant during the post Cretaceous period and have successfully been used for the reconstruction of climate by measuring the stable isotopic composition (2,3,4). Well preserved specimens of Cretaceous Turritella from the Rajamundry Infratrappean beds and those from the Miocene, Holocene succession of Kutch, western India were analysed along with specimen from the modern time scale (also from Kutch). The Cretaceous, early to mid Miocene, early Holocene and modern shells recorded δ13C variability from 0.36 to 4.94‰, -1.83 to -4.83‰, -3.26 to 0.40‰, -1.47 to -4.70‰ respectively suggesting drop in the productivity during mid Miocene and subsequent period of rapid growth. The Variability in terms of δ18O ranges from -2.28 to -4.99‰, -2.66 to -7.06‰, -2.86 to 0.96‰, -1.05 to -3.23‰ for the Cretaceous, early to mid Miocene, early Holocene and modern shells respectively. Corbula sp. collected from the same strata with that of the early to mid Holocene Turritella showed a similar δ13C and δ18O values denoting similar environmental condition during deposition. Absence of any significant correlation between δ13C vs δ18O support equilibrium precipitation of shell growth bands. We used Epstein oxygen isotope thermometry to derive temperature from the oxygen isotope of carbonate and adopted water isotopic composition (1‰ for the Cretaceous and -0.7‰ for the Miocene) from the literature. Our observation captured an overall cooling trend from the Cretaceous to the Holocene time period (especially in between mid Miocene to Holocene) and a subsequent warming trend in modern time. Validation with other thermometry method will be displayed at the time of presentation. References: [1] Zachos et al., 2001

  3. Multiple episodes of fast exhumation since Cretaceous in southeast Tibet, revealed by low-temperature thermochronology (United States)

    Liu-Zeng, Jing; Zhang, Jinyu; McPhillips, Devin; Reiners, Peter; Wang, Wei; Pik, Raphael; Zeng, Lingsen; Hoke, Greg; Xie, Kejia; Xiao, Ping; Zheng, Dewen; Ge, Yukui


    The southeast margin of the Tibetan plateau is characterized by deeply incised river valleys separated by a perched low relief landscape that gently descends from the high Tibetan plateau towards the southeast. When and how this unique landscape formed is debated. The onset of increased river incision is often interpreted as a proxy for the timing of surface uplift. Here, apatite and zircon (U-Th)/He and apatite fission track thermochronometries are employed to map the spatial and temporal pattern of exhumation in the region. Vertical profiles of granitic rocks were collected near Deqin (∼28.5°N) and Weixi (∼27.5°N). The two transects share a similar exhumation history, with two episodes of relatively fast exhumation (∼100-300 m/Myr) in the Cenozoic: during the Paleocene to Eocene (60-40 Ma) and Miocene to present (20-0 Ma), separated by an intervening period of slow exhumation. A pulse of moderate to high exhumation (70-300 m/Myr) during the mid- to late-Cretaceous (120-80 Ma) is also present in the data. However, the rate and total amount of exhumation near Deqin is larger than at Weixi and is especially pronounced in the interval between 20 Ma to present. We interpret this difference as possibly related to differences in erosion rates between the Lancang (Deqin) and the Jinsha (Weixi) rivers. The Paleocene to Eocene episode of fast exhumation is likely in response to early Cenozoic deformation along tectonic boundary structures, related to the transpressional collision of the Indian plate with this region. Pre-Miocene episodes of fast exhumation corroborate recent paleoaltimetric studies, which show that the southeast margin of the Tibetan plateau was elevated prior to the Oligocene.

  4. Early phonology revealed by international adoptees' birth language retention. (United States)

    Choi, Jiyoun; Broersma, Mirjam; Cutler, Anne


    Until at least 6 mo of age, infants show good discrimination for familiar phonetic contrasts (i.e., those heard in the environmental language) and contrasts that are unfamiliar. Adult-like discrimination (significantly worse for nonnative than for native contrasts) appears only later, by 9-10 mo. This has been interpreted as indicating that infants have no knowledge of phonology until vocabulary development begins, after 6 mo of age. Recently, however, word recognition has been observed before age 6 mo, apparently decoupling the vocabulary and phonology acquisition processes. Here we show that phonological acquisition is also in progress before 6 mo of age. The evidence comes from retention of birth-language knowledge in international adoptees. In the largest ever such study, we recruited 29 adult Dutch speakers who had been adopted from Korea when young and had no conscious knowledge of Korean language at all. Half were adopted at age 3-5 mo (before native-specific discrimination develops) and half at 17 mo or older (after word learning has begun). In a short intensive training program, we observe that adoptees (compared with 29 matched controls) more rapidly learn tripartite Korean consonant distinctions without counterparts in their later-acquired Dutch, suggesting that the adoptees retained phonological knowledge about the Korean distinction. The advantage is equivalent for the younger-adopted and the older-adopted groups, and both groups not only acquire the tripartite distinction for the trained consonants but also generalize it to untrained consonants. Although infants younger than 6 mo can still discriminate unfamiliar phonetic distinctions, this finding indicates that native-language phonological knowledge is nonetheless being acquired at that age.

  5. Intra-Continental Deformation by Mid-Crustal Shearing and Doming in a Cenozoic Compressive Setting Along the Ailao Shan-Red River Shear Zone (United States)

    Zhang, B.


    Large-scale lateral strike-slip shear zones have been a key point in the debate about the deformation mechanisms of Asia in response to the India-Asia collision. The exhumed gneiss has been attributed to lateral strike-slip shear zone. This hypothesis has been challenged by recent discoveries indicating that a contractional doming deformation prior to the initiation of lateral strike-slip shearing. The Cenozoic Xuelong Shan antiformal dome is located at the northern segment of the Ailao Shan-Red River shear zone. Subhorizontal foliation in the gneiss core are recognized, representing a broad top-to-NE shear initiated under amphibolite facies conditions and propagated into greenschist facies in the mantling schist and strike-slip shear zone. Quartz CPOs and opening angles of crossed girdle fabrics in quartz suggest that the deformation temperatures increased with increasing structural depth from 300-500 °C in the mantling schist to ≥650 °C in the gneissic core. This trend is mirrored by variations in the metamorphic grade of the syn-kinematic mineral assemblages and microstructures, which ranges from garnet + amphibole + biotite + sillimanite + rutite + feldspar in the core to garnet + staurolite + biotite + epidote + muscovite within the limb units. Five-stage deformation is identified: (1) a broad top-to-NE shear in the subhorizontal level (D1); (2) opposing reverse-sense shear along the two schist limbs of the dome during contraction-related doming (D2-D3); (3) sinistral strike-slip shearing within the eastern limb (D4); and (4) extensional deformation (D5). The antiformal dome formation had been roughly coeval with top-to-NE ductile shearing in the mid-crust at 32 Ma or earlier. The geometries of the antiformal dome in the Xuelong Shan dome are similar to those associated with the antiform in the Dai Nui Con Voi, Diancang Shan and Ailao Shan zones. It is likely that the complex massifs, which define a regional linear gneiss dome zone in Cenozoic intra

  6. Early prenatal syphilis

    Directory of Open Access Journals (Sweden)

    Santosh Rathod


    Full Text Available Syphilis in pregnancy still remains a challenge despite the availability of adequate diagnostic tests for serological screening and penicillin therapy. We report a case of 2 month old female infant who presented with runny nose, papulosquamous lesions over both palms and soles and perianal erosions since 1 month after birth. Cutaneous examination revealed moist eroded areas in the perianal region and fine scaly lesions over palms and soles. Radiograph of both upper limbs and limbs revealed early periosteal changes in lower end of humerus and lower end of tibia. Diagnosis of early pre-natal syphilis was confirmed by Child′s Serum Rapid Plasma Reagin Antibody test [S.RPR] being positive with 1:64 dilution while that of mother was 1:8.

  7. Early discontinuation

    DEFF Research Database (Denmark)

    Hansen, Dorte Gilså; Felde, Lina; Gichangi, Anthony


    prevalence and rate of early discontinuation of different drugs consisting of, in this study, lipid-lowering drugs, antihypertensive drugs, antidepressants, antidiabetics and drugs against osteoporosis. Material and methods This was a register study based on prescription data covering a 4-year period...... and consisting of 470,000 citizens. For each practice and group of drug, a 1-year prevalence for 2002 and the rate of early discontinuation among new users in 2002-2003 were estimated. Early discontinuation was defined as no prescriptions during the second half-year following the first prescription....... There was a positive association between the prevalence of prescribing for the specific drugs studied (antidepressants, antidiabetics, drugs against osteoporosis and lipid-lowering drugs) and early discontinuation (r = 0.29 -0.44), but not for anti-hypertensive drugs. The analysis of the association between prevalence...

  8. Early literacy

    DEFF Research Database (Denmark)

    Jensen, Anders Skriver


    This paper discusses findings from the Danish contribution to the EASE project, a European research project running from 2008 to 2010 on early literacy in relation to the transition from childcare to school. It explores a holistic, inclusive approach to early literacy that resists a narrow...... and schools. The paper also draws on Gee’s (2001, 2003, 2004, 2008) sociocultural approach to literacy, and Honneth’s (2003, 2006) concept of recognition. Emphasizing participation and recognition as key elements, it claims that stakeholders in early liter- acy must pay attention to how diverse early literacy...... opportunities empower children, especially when these opportunities are employed in a project-based learning environ- ment in which each child is able to contribute to the shared literacy events....

  9. A roller-like bird (Coracii) from the Early Eocene of Denmark. (United States)

    Bourdon, Estelle; Kristoffersen, Anette V; Bonde, Niels


    The fossil record of crown group birds (Neornithes) prior to the Cretaceous-Paleogene boundary is scarce and fragmentary. Early Cenozoic bird fossils are more abundant, but are typically disarticulated and/or flattened. Here we report the oldest roller (Coracii), Septencoracias morsensis gen. et sp. nov. (Primobucconidae), based on a new specimen from the Early Eocene (about 54 million years ago) Fur Formation of Denmark. The new fossil is a nearly complete, three-dimensionally preserved and articulated skeleton. It lies at the lower end of the size range for extant rollers. Salient diagnostic features of Septencoracias relative to other Coracii include the proportionally larger skull and the small, ovoid and dorsally positioned narial openings. Our discovery adds to the evidence that the Coracii had a widespread northern hemisphere distribution in the Eocene. Septencoracias is the oldest substantial record of the Picocoraciae and provides a reliable calibration point for molecular phylogenetic studies.

  10. Arthropods in modern resins reveal if amber accurately recorded forest arthropod communities. (United States)

    Solórzano Kraemer, Mónica M; Delclòs, Xavier; Clapham, Matthew E; Arillo, Antonio; Peris, David; Jäger, Peter; Stebner, Frauke; Peñalver, Enrique


    Amber is an organic multicompound derivative from the polymerization of resin of diverse higher plants. Compared with other modes of fossil preservation, amber records the anatomy of and ecological interactions between ancient soft-bodied organisms with exceptional fidelity. However, it is currently suggested that ambers do not accurately record the composition of arthropod forest paleocommunities, due to crucial taphonomic biases. We evaluated the effects of taphonomic processes on arthropod entrapment by resin from the plant Hymenaea , one of the most important resin-producing trees and a producer of tropical Cenozoic ambers and Anthropocene (or subfossil) resins. We statistically compared natural entrapment by Hymenaea verrucosa tree resin with the ensemble of arthropods trapped by standardized entomological traps around the same tree species. Our results demonstrate that assemblages in resin are more similar to those from sticky traps than from malaise traps, providing an accurate representation of the arthropod fauna living in or near the resiniferous tree, but not of entire arthropod forest communities. Particularly, arthropod groups such as Lepidoptera, Collembola, and some Diptera are underrepresented in resins. However, resin assemblages differed slightly from sticky traps, perhaps because chemical compounds in the resins attract or repel specific insect groups. Ground-dwelling or flying arthropods that use the tree-trunk habitat for feeding or reproduction are also well represented in the resin assemblages, implying that fossil inclusions in amber can reveal fundamental information about biology of the past. These biases have implications for the paleoecological interpretation of the fossil record, principally of Cenozoic amber with angiosperm origin.

  11. The ICE hypothesis stands: How the dogma of late Cenozoic tectonic uplift can no longer be sustained in the light of data and physical laws (United States)

    Nielsen, S. B.; Clausen, O. R.; Jacobsen, B. H.; Thomsen, E.; Huuse, M.; Gallagher, K.; Balling, N.; Egholm, D.


    In this reply, we address the issues raised by the comment of Chalmers et al. (2010) regarding our ICE hypothesis for the evolution of western Scandinavia. We reject their conjectures as based, uncritically and without consideration of physical mechanisms, on the long-standing dogma of late Cenozoic tectonic uplift. Our hypothesis, in contrast, honours well-documented physical laws and the present wealth of actual data constraints (as opposed to dogma-biased inferences). After careful consideration of the points raised by Chalmers et al. (2010) we maintain our simple explanation for the evolution of Scandinavian topography, as it honours well-documented actual data constraints, such as crustal structure (including its spatio-temporal variability), thermal history in the eastern North Sea, global and regional climatic change (including eustacy) and sedimentation in the adjacent basins. The inevitable conclusion is that, although more data constraints are desirable, the current best fit hypothesis, is that the Scandinavian topography is of Caledonide origin, and has been shaped by fluvial and glacial buzzsaw and periglacial processes, and most recently (last few Myr) been re-invigorated by extensive glacial erosion in the fjords and on the shelf.

  12. The Mesozoic-Cenozoic igneous intrusions and related sediment-dominated hydrothermal activities in the South Yellow Sea Basin, the Western Pacific continental margin (United States)

    Yumao, Pang; Xunhua, Zhang; Guolin, Xiao; Luning, Shang; Xingwei, Guo; Zhenhe, Wen


    Various igneous complexes were identified in multi-channel seismic reflection profiles from the South Yellow Sea Basin. It is not rare that magmatic intrusions in sedimentary basins cause strong thermal perturbations and hydrothermal activities. Some intrusion-related hydrothermal vent complexes have been identified and they are considered to originate from the deep sedimentary contact aureole around igneous intrusions and terminate in upper vents structures, and are linked by a vertical conduit system. The upper vent complexes are usually eye-shaped, dome-shaped, fault-related, crater-shaped or pock-shaped in seismic profiles. A schematic model was proposed to illustrate the structures of different types of hydrothermal vent complexes. A conceptual conduit model composed of an upper pipe-like part and a lower branching part was also derived. Hydrothermal vent complexes mainly developed during the Middle-Late Cretaceous, which is coeval with, or shortly after the intrusion. The back-arc basin evolution of the area which is related to the subduction of the Paleo-Pacific plate during the Mesozoic-Cenozoic may be the principal factor for voluminous igneous complexes and vent complexes in this area. It is significant to study the characteristics of igneous complexes and related hydrothermal vent complexes, which will have implications for the future study of this area.

  13. K-Ar ages of basalts from the Higashi-Matsuura district, northwestern Kyushu, Japan and regional geochronology of the Cenozoic alkaline volcanic rocks in eastern Asia

    International Nuclear Information System (INIS)

    Nakamura, Eizo; Campbell, I.H.; McDougall, I.


    Seven new K-Ar age determinations are presented on whole rock samples from alkaline and tholeiitic basalts of the Higashi-Matsuura district, northwestern Kyushu, Japan. Ages obtained range from 2.92 ± 0.03 Ma to 3.01 ± 0.04 Ma; these ages are essentially identical within analytical errors and yield an average age of 2.98 ± 0.03 Ma (Late Pliocene). When combined on an isochron type diagram the six Higashi-Matsuura samples give an age of 3.00 ± 0.03 Ma with the composition of nonradiogenic 40 Ar/ 36 Ar = 294.2 ± 2.0. The excellent age agreement of samples with different K contents and petrographic characteristics provides strong evidence that the tholeiitic and alkaline basalts were erupted for an extremely short period in the Higashi-Matsuura district. A basalt from Ogawashima Island yields a K-Ar age of 3.58 ± 0.04 Ma. This study and previously reported data support the hypothesis that alkaline volcanic activity in southwestern Japan commenced some 10 Ma ago and continued intermittently until recent times. Systematic variations of age and distribution of Cenozoic alkaline basalts are recognized in northeastern China, Korea and southwestern Japan. It is suggested that these variations are related to the initiation of 'mantle plumes' resulting from convection in the mantle wedge caused or controlled by subduction of the Kula and Pacific plates. (author)

  14. Cenozoic extinction and recolonization in the New Zealand flora: the case of the fleshy-fruited epacrids (Styphelieae, Styphelioideae, Ericaceae). (United States)

    Puente-Lelièvre, Caroline; Harrington, Mark G; Brown, Elizabeth A; Kuzmina, Maria; Crayn, Darren M


    The origins and evolutionary history of the New Zealand flora has been the subject of much debate. The recent description of Cyathodophyllum novaezelandieae from early Miocene sediments in New Zealand provides possible evidence for the antiquity of the fleshy fruited epacrids (tribe Styphelieae, Ericaceae) in New Zealand. Yet the extant species in this tribe are thought to be very closely related to or conspecific with Australian taxa, suggesting recent trans-Tasman origins. In order to investigate the origins and evolution of the extant New Zealand Styphelieae we produced molecular phylogenetic trees based on sequences of three plastid regions that include representatives of all the genera of the tribe and eight of the ten New Zealand species. We estimated the range of minimum ages of the New Zealand lineages with Bayesian relaxed-clock analyses using different calibration methods and relative dating. We found strong support for each of the eight extant species of New Zealand Styphelieae being a distinct lineage that is nested within an Australian clade. In all except one case the sister is from Tasmania and/or the east coast of mainland Australia; for Acrothamnus colensoi the sister is in New Guinea. Estimated dates indicate that all of the New Zealand lineages diverged from their non-New Zealand sisters within the last 7 Ma. Time discontinuity between the fossil C.novae-zelandiae (20-23 Ma) and the origins of the extant New Zealand lineages (none older than 5 Ma) indicates that the fossil and extant Styphelieae in New Zealand are not related. The relative dating analysis showed that to accept this relationship, it would be necessary to accept that the Styphelieae arose in the early-mid Mesozoic (210-120 Ma), which is starkly at odds with multiple lines of evidence on the age of Ericales and indeed the angiosperms. Therefore, our results do not support the hypothesis that Styphelieae have been continuously present in New Zealand since the early Miocene. Instead

  15. Modulation of Late Cretaceous and Cenozoic climate by variable drawdown of atmospheric pCO2 from weathering of basaltic provinces on continents drifting through the equatorial humid belt

    Directory of Open Access Journals (Sweden)

    D. V. Kent


    Full Text Available The small reservoir of carbon dioxide in the atmosphere (pCO2 that modulates climate through the greenhouse effect reflects a delicate balance between large fluxes of sources and sinks. The major long-term source of CO2 is global outgassing from sea-floor spreading, subduction, hotspot activity, and metamorphism; the ultimate sink is through weathering of continental silicates and deposition of carbonates. Most carbon cycle models are driven by changes in the source flux scaled to variable rates of ocean floor production, but ocean floor production may not be distinguishable from being steady since 180 Ma. We evaluate potential changes in sources and sinks of CO2 for the past 120 Ma in a paleogeographic context. Our new calculations show that decarbonation of pelagic sediments by Tethyan subduction contributed only modestly to generally high pCO2 levels from the Late Cretaceous until the early Eocene, and thus shutdown of this CO2 source with the collision of India and Asia at the early Eocene climate optimum at around 50 Ma was inadequate to account for the large and prolonged decrease in pCO2 that eventually allowed the growth of significant Antarctic ice sheets by around 34 Ma. Instead, variation in area of continental basalt terranes in the equatorial humid belt (5° S–5° N seems to be a dominant factor controlling how much CO2 is retained in the atmosphere via the silicate weathering feedback. The arrival of the highly weatherable Deccan Traps in the equatorial humid belt at around 50 Ma was decisive in initiating the long-term slide to lower atmospheric pCO2, which was pushed further down by the emplacement of the 30 Ma Ethiopian Traps near the equator and the southerly tectonic extrusion of SE Asia, an arc terrane that presently is estimated to account for 1/4 of CO2 consumption from all basaltic provinces that account for ~1/3 of the total CO2 consumption by continental silicate weathering (Dessert et al., 2003. A negative climate

  16. Agerinia marandati sp. nov., a new early Eocene primate from the Iberian Peninsula, sheds new light on the evolution of the genus Agerinia. (United States)

    Femenias-Gual, Joan; Minwer-Barakat, Raef; Marigó, Judit; Poyatos-Moré, Miquel; Moyà-Solà, Salvador


    The Eocene was the warmest epoch of the Cenozoic and recorded the appearance of several orders of modern mammals, including the first occurrence of Euprimates. During the Eocene, Euprimates were mainly represented by two groups, adapiforms and omomyiforms, which reached great abundance and diversity in the Northern Hemisphere. Despite this relative abundance, the record of early Eocene primates from the European continent is still scarce and poorly known, preventing the observation of clear morphological trends in the evolution of the group and the establishment of phylogenetic relationships among different lineages. However, knowledge about the early Eocene primates from the Iberian Peninsula has been recently increased through the description of new material of the genus Agerinia from several fossil sites from Northeastern Spain. Here we present the first detailed study of the euprimate material from the locality of Masia de l'Hereuet (early Eocene, NE Spain). The described remains consist of one fragment of mandible and 15 isolated teeth. This work provides detailed descriptions, accurate measurements, high-resolution figures and thorough comparisons with other species of Agerinia as well with other Eurasian notharctids. Furthermore, the position of the different species of Agerinia has been tested with two phylogenetic analyses. The new material from Masia de l'Hereuet shows several traits that were previously unknown for the genus Agerinia, such as the morphology of the upper and lower fourth deciduous premolars and the P 2 , and the unfused mandible. Moreover, this material clearly differs from the other described species of Agerinia , A. roselli and A. smithorum , thus allowing the erection of the new species Agerinia marandati . The phylogenetic analyses place the three species of Agerinia in a single clade, in which A. smithorum is the most primitive species of this genus. The morphology of the upper molars reinforces the distinction of Agerinia from

  17. Biostratigraphy and carbon isotope stratigraphy of uppermost Cretaceous-lower Cenozoic Muzzle Group in middle Clarence valley, New Zealand

    International Nuclear Information System (INIS)

    Hollis, C.J.; Field, B.D.; Jones, C.M.; Strong, C.P.; Wilson, G.J.; Dickens, G.R.


    Muzzle Group strata exposed along southeast-flowing tributaries of the Clarence River valley, Marlborough, record hemipelagic-pelagic sedimentation across a high latitude (c. 55 degrees S), terrigenous sediment-starved, continental margin from latest Cretaceous to middle Eocene times. Studies of dinoflagellates, foraminifera, calcareous nannofossils, and radiolarians have been integrated with bulk carbonate δ 13 C profiles to establish the chronostratigraphy for two stratigraphic sections along Bluff and Muzzle Streams, middle Clarence valley. The two sections comprise similar successions. Uppermost Cretaceous (upper Haumurian) micritic limestone of Mead Hill Formation is overlain unconformably by Teredo Limestone, a c. 0.25 m thick bed of highly glauconitic, calcareous sandstone. This unit, the basal member of Amuri Limestone, is overlain conformably by c. 15 m thick Lower Limestone, micritic limestone that is glauconitic at base and progressively more marl-rich in its upper part. Lower Limestone grades up into Lower Marl, a poorly exposed, 40-70 m thick unit of alternating marl and micritic limestone beds. Biostratigraphy indicates that the base of Amuri Limestone is younger at Bluff Stream (earliest Eocene, early Waipawan) than at Muzzle Stream (late Paleocene, late Teurian). In the condensed (12 m) upper Paleocene-lower Eocene Amuri Limestone sequence at Muzzle Stream, a trend in δ 13 C from high (≥2.4 permille) to low (≤1 permille) values is consistent with global records across three major climate or carbon cycle perturbations: the late Paleocene carbon isotope maximum (PCIM, 59-56 Ma), the initial Eocene thermal maximum (IETM, 55.5 Ma), and the early Eocene climatic optimum (EECO, 53-50 Ma). Probably only the upper PCIM is preserved in the 4 m thick siliceous limestone interval overlying Teredo Limestone. The IETM is well-defined by a 1 permille negative δ 13 C excursion at the base of a 0.8 m thick marl-rich unit (Dee Marl), 5 m above the base of

  18. Miocene transgression in the central and eastern parts of the Sivas Basin (Central Anatolia, Turkey) and the Cenozoic palaeogeographical evolution (United States)

    Poisson, André; Vrielynck, Bruno; Wernli, Roland; Negri, Alessandra; Bassetti, Maria-Angela; Büyükmeriç, Yesim; Özer, Sacit; Guillou, Hervé; Kavak, Kaan S.; Temiz, Haluk; Orszag-Sperber, Fabienne


    We present here a reappraisal of the tectonic setting, stratigraphy and palaeogeography of the central part of the Sivas Basin from Palaeocene to late Miocene. The Sivas Basin is located in the collision zone between the Pontides (southern Eurasia) and Anatolia (a continental block rifted from Gondwana). The basin overlies ophiolites that were obducted onto Anatolia from Tethys to the north. The Central Anatolian Crystalline Complex (CACC) experienced similar ophiolite obduction during Campanian time, followed by exhumation and thrusting onto previously emplaced units during Maastrichtian time. To the east, crustal extension related to exhumation of the CACC created grabens during the early Tertiary, including the Sivas Basin. The Sivas Basin underwent several tectonic events during Paleogene-Neogene. The basin fill varies, with several sub-basins, each being characterised by a distinctive sequence, especially during Oligocene and Miocene. Evaporite deposition in the central part of the basin during early Oligocene was followed by mid-late Oligocene fluvio-lacustrine deposition. The weight of overlying fluvial sediments triggered salt tectonics and salt diapir formation. Lacustrine layers that are interbedded within the fluviatile sediments have locally yielded charophytes of late Oligocene age. Emergent areas including the pre-existing Sivas Basin and neighbouring areas were then flooded from the east by a shallow sea, giving rise to a range of open-marine sub-basins, coralgal reef barriers and subsiding, restricted-marine sub-basins. Utilising new data from foraminifera, molluscs, corals and nannoplankton, the age of the marine transgression is reassessed as Aquitanian. Specifically, age-diagnostic nannoplankton assemblages of classical type occur at the base of the transgressive sequence. However, classical stratigraphic markers have not been found within the planktic foraminiferal assemblages, even in the open-marine settings. In the restricted-marine sediments

  19. Geochemical evolution of Cenozoic-Cretaceous magmatism and its relation to tectonic setting, southwestern Idaho, U.S.A

    International Nuclear Information System (INIS)

    Norman, M.D.; Leeman, W.P.


    Magmatism in the western United States spanned a change in tectonic setting from Mesozoic and early Tertiary plate convergence to middle and late Tertiary crustal extension. This paper presents new major element, trace element, and isotopic (Sr, Nd, Pb) data on a diverse suite of Cretaceous to Neogene igneous rocks from the Owyhee area of southwestern Idaho to evaluate possible relationships between the evolving tectonic regime and temporal changes in igneous activity. The oldest studied rocks are Cretaceous granitic intrusives that probably formed by large-scale mixing of Precambrian crust with subduction-related magmas. Silicic Eocene tuffs are also rich in crustal components, but have isotopic compositions unlike the Cretaceous intrusives. These data require at least two crustal sources that may correspond to domains of significantly different age (Archean vs. Proterozoic). The oldest mafic lavas in the study area are Oligocene andesites and basalts compositionally similar to subduction-related magmas derived from asthenospheric mantle and erupted through thick continental crust. Direct crustal involvement during oligocene time was limited to minor interaction with the mafic magmas. Miocene activity produced bimodal basalt-rhyolite suites and minor volumes of hybrid lavas. Compositions of Miocene basalts demonstrate the decline of subduction-related processes, and increased involvement of subcontinental lithospheric mantle as a magma source. Crustally-derived Miocene rhyolites have isotopic compositions similar to those of the Cretaceous granitic rocks but trace element abundances more typical of within-plate magmas. (orig./WB)

  20. Early Math. (United States)

    Van Nuys, Ute Elisabeth


    Presents reviews of the following mathematics software designed to teach young children counting, number recognition, visual discrimination, matching, addition, and subtraction skills; Stickybear Numbers, Learning with Leeper, Getting Ready to Read and Add, Counting Parade, Early Games for Young Children, Charlie Brown's 1,2,3's, Let's Go Fishing,…

  1. Late Cenozoic stable isotope stratigraphy and paleoceanography of DSDP sites from the East equatorial and central north Pacific Ocean

    International Nuclear Information System (INIS)

    Keigwin, L.D. Jr


    Stable isotopic analyses of Middle Miocene to Quaternary foraminiferal calcite from east equatorial and central north Pacific DSDP cores have provided much new information on the paleoceanography of the Pacific Neogene. The history of delta 18 O change in planktonic foraminifera reflects the changing isotopic composition and temperature of seawater at the time of test formation. Changes in the isotopic composition of benthonic foraminfera largely reflect changes in the volume of continental ice. Isotopic data from these cores indicates the following sequence of events related to continental galaciation: (1) A permanent Antarctic ice sheet developed late in the Middle Miocene (about 13 to 11.5 m.y. ago). (2) The Late Miocene (about 11.5 to 5 m.y. ago) is marked by significant variation in delta 18 O of about 0.5% throughout, indicating instability of Antarctic ice cap size or bottom-water temperature. (3) The early Pliocene (5 to about 3 m.y. ago) was a time of relative stability in ice volume and bottom-water temperature. (4) Growth of permanent Northern Hemisphere ice sheets is inferred to have begun about 3 m.y. ago. (5) The late Pliocene (3 to about 1.8 m.y. ago) is marked by one major glaciation or bottom-water cooling dated between about 2.1 to 2.3 m.y. (6) There is some evidence that the frequency of glacial-interglacial cycles increased at about 0.9 m.y. (Auth.)

  2. Late Cretaceous and Cenozoic seafloor and oceanic basement roughness: Spreading rate, crustal age and sediment thickness correlations (United States)

    Bird, Robert T.; Pockalny, Robert A.


    Single-channel seismic data from the South Australian Basin and Argentine Basin, and bathymetry data from the flanks of the Mid-Atlantic Ridge, East Pacific Rise and Southwest Indian Ridge are analysed to determine the root-mean-square (RMS) roughness of the seafloor and oceanic basement created at seafloor spreading rates ranging from 3 to 80 km/Ma (half-rate). For these data, crustal ages range from near zero to 85 Ma and sediment thicknesses range from near zero to over 2 km. Our results are consistent with a negative correlation of basement roughness and spreading rate where roughness decreases dramatically through the slow-spreading regime (oceanic basement roughness and spreading rate appears to have existed since the late Cretaceous for slow and intermediate spreading rates, suggesting that the fundamental processes creating abyssal hill topography may have remained the same for this time period. Basement roughness does not appear to decrease (smooth) with increasing crustal age, and therefore off-ridge degradation of abyssal hill topography by mass wasting is not detected by our data. Seismic data reveal that sediment thickness increases with increasing crustal age in the South Australian Basin and Argentine Basin, but not monotonically and with significant regional variation. We show that minor accumulations of sediment can affect roughness significantly. Average sediment accumulations of less that 50 m (for our 100 km long sample seismic profiles and half-spreading rates ocean ridges.

  3. Upper mantle structure under western Saudi Arabia from Rayleigh wave tomography and the origin of Cenozoic uplift and volcanism on the Arabian Shield

    Energy Technology Data Exchange (ETDEWEB)

    Park, Y; Nyblade, A; Rodgers, A; Al-Amri, A


    The shear velocity structure of the shallow upper mantle beneath the Arabian Shield has been modeled by inverting new Rayleigh wave phase velocity measurements between 45 and 140 s together with previously published Rayleigh wave group velocity measurement between 10 and 45 s. For measuring phase velocities, we applied a modified array method that minimizes the distortion of raypaths by lateral heterogeneity. The new shear velocity model shows a broad low velocity region in the lithospheric mantle across the Shield and a low velocity region at depths {ge} 150 km localized along the Red Sea coast and Makkah-Madinah-Nafud (MMN) volcanic line. The velocity reduction in the upper mantle corresponds to a temperature anomaly of {approx}250-330 K. These finding, in particular the region of continuous low velocities along the Red Sea and MMN volcanic line, do not support interpretations for the origin of the Cenozoic plateau uplift and volcanism on the Shield invoking two separate plumes. When combined with images of the 410 and 660 km discontinuities beneath the southern part of the Arabian Shield, body wave tomographic models, a S-wave polarization analysis, and SKS splitting results, our new model supports an interpretation invoking a thermal upwelling of warm mantle rock originating in the lower mantle under Africa that crosses through the transition zone beneath Ethiopia and moves to the north and northwest under the eastern margin of the Red Sea and the Arabian Shield. In this interpretation, the difference in mean elevation between the Platform and Shield can be attributed to isostatic uplift caused by heating of the lithospheric mantle under the Shield, with significantly higher region along the Red Sea possibly resulting from a combination of lithosphere thinning and dynamic uplift.

  4. Plate flexure and volcanism: Late Cenozoic tectonics of the Tabar-Lihir-Tanga-Feni alkalic province, New Ireland Basin, Papua New Guinea (United States)

    Lindley, I. D.


    Late Cenozoic Tabar-Lihir-Tanga-Feni (TLTF) alkaline volcanism, New Ireland Basin, PNG, is associated with extensional cracks along the crests of flexed ridges developed on the New Ireland Microplate (New name). The tectonic alignment of the TLTF volcanic arc is essentially perpendicular to the flexed ridges, suggesting that fractures parallel to the direction of maximum horizontal compression facilitated the rapid ascent of alkaline magmas from the mantle region, perhaps 60-70 km depth. The mainly Pliocene to Pleistocene volcanoes were localized at the intersection of ridge-parallel Kabang structures and arc-parallel Niffin structures, suggesting that the Kabang-Niffin structural intersections underlying each of the TLTF island groups provided a well developed, clustered network of open conduits which tapped the mantle source region. Periodic post-Miocene locking and unlocking along the strike-slip Kilinailau Fault (New name) are thought to have functioned as a valve, turning on (Pliocene) and then turning off (Pleistocene) volcanic activity, respectively. Partial locking of the Kilinailau Fault during the Pliocene resulted in the accumulation of intraplate stresses within the New Ireland Microplate, and caused plate flexure and ridge development, plate-cracking along ridge crests and the development of arc-parallel regional fractures parallel to the direction of maximum compression. Unlocking of the Kilinailau Fault in the Pleistocene resulted in the release of intraplate stresses in the New Ireland Microplate and a cessation of volcanic activity across most of the TLTF arc. The style and scale of plate flexure and cracking, accompanied by within-plate alkaline volcanism from equally spaced ridge-top eruptive centers confined to a narrow, linear volcanic arc are unknown from any other tectonic province.

  5. Investigating the ancient landscape and Cenozoic drainage development of southern Yukon (Canada), through restoration modeling of the Cordilleran-scale Tintina Fault. (United States)

    Hayward, N.; Jackson, L. E.; Ryan, J. J.


    This study of southern Yukon (Canada) challenges the notion that the landscape in the long-lived, tectonically active, northern Canadian Cordillera is implicitly young. The impact of Cenozoic displacement along the continental- scale Tintina Fault on the development of the Yukon River and drainage basins of central Yukon is investigated through geophysical and hydrological modeling of digital terrain model data. Regional geological evidence suggests that the age of the planation of the Yukon plateaus is at least Late Cretaceous, rather than Neogene as previously concluded, and that there has been little penetrative deformation or net incision in the region since the late Mesozoic. The Tintina Fault has been interpreted as having experienced 430 km of dextral displacement, primarily during the Eocene. However, the alignment of river channels across the fault at specific displacements, coupled with recent seismic events and related fault activity, indicate that the fault may have moved in stages over a longer time span. Topographic restoration and hydrological models show that the drainage of the Yukon River northwestward into Alaska via the ancestral Kwikhpak River was only possible at restored displacements of up to 50-55 km on the Tintina Fault. We interpret the published drainage reversals convincingly attributed to the effects of Pliocene glaciation as an overprint on earlier Yukon River reversals or diversions attributed to tectonic displacements along the Tintina Fault. At restored fault displacements of between 230 and 430 km, our models illustrate that paleo Yukon River drainage conceivably may have flowed eastward into the Atlantic Ocean via an ancestral Liard River, which was a tributary of the paleo Bell River system. The revised drainage evolution if correct requires wide-reaching reconsideration of surficial geology deposits, the flow direction and channel geometries of the region's ancient rivers, and importantly, exploration strategies of placer gold

  6. Evidence From Svalbard for Cool Episodes in Early Tertiary Arctic Climate (United States)

    Spielhagen, R. F.; Tripati, A.; Mac Niocaill, C.


    The Arctic is a climatically sensitive and important region. However, very little is known about the climatic and oceanographic evolution of the area, particularly prior to the Neogene. Until recently, the Arctic was assumed to be characterized by relatively warm conditions during the early Cenozoic. The Early Tertiary sedimentary sequence on Svalbard contains several layers with coal seams and broad-leaved plants which were commonly accepted as indicators of a generally temperate-warm climate. Here we report on the intermittent occurrence of certain temperature indicators in the succession, which may represent the first northern high- latitude record of near-freezing temperatures for the early Cenozoic. Besides the findings of probably ice- rafted erratic clasts in the Paleocene and Eocene sandstones and shales, we note especially the occurrence of glendonites which are pseudomorphs of calcite after ikaite (calcium carbonate hexahydrate). Stratigraphic control for the most important glendonite layers was improved by paleomagnetic investigations on the host sediment. We measured the chemical composition of Svalbard glendonites which is almost identical to that of similar pseudomorphs from the Lower Cretaceaous of Northern Canada. Mass spectrometric analyses of the glendonite calcite gave very low carbon isotope values. These values suggest a provenance of the calcium carbonate from marine organic carbon and connect our glendonites to the precursor mineral ikaite which has similar low values. Since a variety of studies has demonstrated that ikaite is stable only at temperatures close to freezing point, we have to infer low temperatures also for the deepositional environment of which the sediments were deposited that now hold glendonites. These results imply the occurrence of cooling phases episodically during the warm background climate of the Paleocene and Eocene, suggesting that temperature variability was much greater than previously recognized.

  7. The Cenozoic western Svalbard margin: sediment geometry and sedimentary processes in an area of ultraslow oceanic spreading (United States)

    Amundsen, Ingrid Marie Hasle; Blinova, Maria; Hjelstuen, Berit Oline; Mjelde, Rolf; Haflidason, Haflidi


    The northeastern high-latitude North Atlantic is characterised by the Bellsund and Isfjorden fans on the continental slope off west Svalbard, the asymmetrical ultraslow Knipovich spreading ridge and a 1,000 m deep rift valley. Recently collected multichannel seismic profiles and bathymetric records now provide a more complete picture of sedimentary processes and depositional environments within this region. Both downslope and alongslope sedimentary processes are identified in the study area. Turbidity currents and deposition of glacigenic debris flows are the dominating downslope processes, whereas mass failures, which are a common process on glaciated margins, appear to have been less significant. The slide debrite observed on the Bellsund Fan is most likely related to a 2.5-1.7 Ma old failure on the northwestern Barents Sea margin. The seismic records further reveal that alongslope current processes played a major role in shaping the sediment packages in the study area. Within the Knipovich rift valley and at the western rift flank accumulations as thick as 950-1,000 m are deposited. We note that oceanic basement is locally exposed within the rift valley, and that seismostratigraphic relationships indicate that fault activity along the eastern rift flank lasted until at least as recently as 1.5 Ma. A purely hemipelagic origin of the sediments in the rift valley and on the western rift flank is unlikely. We suggest that these sediments, partly, have been sourced from the western Svalbard—northwestern Barents Sea margin and into the Knipovich Ridge rift valley before continuous spreading and tectonic activity caused the sediments to be transported out of the valley and westward.

  8. Revealing the programming process

    DEFF Research Database (Denmark)

    Bennedsen, Jens; Caspersen, Michael Edelgaard


    One of the most important goals of an introductory programming course is that the students learn a systematic approach to the development of computer programs. Revealing the programming process is an important part of this; however, textbooks do not address the issue -- probably because...... the textbook medium is static and therefore ill-suited to expose the process of programming. We have found that process recordings in the form of captured narrated programming sessions are a simple, cheap, and efficient way of providing the revelation.We identify seven different elements of the programming...

  9. TypeScript revealed

    CERN Document Server

    Maharry, Dan


    TypeScript Revealed is a quick 100-page guide to Anders Hejlsberg's new take on JavaScript. With this brief, fast-paced introduction to TypeScript, .NET, Web and Windows 8 application developers who are already familiar with JavaScript will easily get up to speed with TypeScript and decide whether or not to start incorporating it into their own development. TypeScript is 'JavaScript for Application-scale development'; a superset of JavaScript that brings to it an additional object-oriented-like syntax familiar to .NET programmers that compiles down into simple, clean JavaScript that any browse

  10. Paleoecologies and paleoclimates of late cenozoic mammals from Southwest China: Evidence from stable carbon and oxygen isotopes (United States)

    Biasatti, Dana; Wang, Yang; Gao, Feng; Xu, Yingfeng; Flynn, Lawrence


    To examine paleodiets and habitats of extinct taxa and to understand long-term regional climate change, we determined the carbon and oxygen isotopic compositions of fossil herbivore teeth and soil samples from six localities in Yunnan Province, Southwest China, ranging in age from ˜10 Ma to the present. Although limited in spatial and temporal coverage, these initial results reveal significant changes in the environments and diets of mammalian taxa over the last 10 million years. Prior to 2-3 Ma, while most mammals examined had pure or nearly pure C 3 diets, some individuals consumed a small amount of C 4 grasses (up to 20% C 4). Since then, C 4 grasses became a significant dietary component for most herbivores as indicated by higher enamel-δ 13C values in the Pleistocene Yuanmou Formation and at Shangri-La, most likely reflecting an increased C 4 biomass in the region. The carbon isotope results show that the diets of mammals of ˜2.5-1.75 Ma from Shangri-La ranged from pure C 3 to pure C 4 while 1.7 Ma horses from Yuanmou had 0-70% C 4 grasses in their diets. Mammals living at ˜8-7 Ma in the Yuanmou and Lufeng region had very similar diets and habitats, with similar climatic conditions. Increased C 4 biomass after ˜3-4 Ma suggests a significant change in certain aspects of regional climate, such as increased seasonality of rainfall or an increase in seasonal drought and fires as these factors are important to modern grasslands. The data also show that unlike the Siwalik fauna in the Indian subcontinent, mammals in Yunnan on the southeast side of the Himalayan-Tibetan Plateau lived in an environment dominated by dense forests until ˜3-4 Ma. Nonetheless, both δ 13C values of paleosol carbonates and fossil enamels indicate that C 4 grasses were present in the Yuanmou region in the latest Miocene and Pliocene (˜8-3.5 Ma), likely in greatly dispersed, small patches of open habitats where the forest canopy was broken or on flood plains, and the C 4 biomass

  11. Hawaii's volcanoes revealed (United States)

    Eakins, Barry W.; Robinson, Joel E.; Kanamatsu, Toshiya; Naka, Jiro; Smith, John R.; Takahashi, Eiichi; Clague, David A.


    Hawaiian volcanoes typically evolve in four stages as volcanism waxes and wanes: (1) early alkalic, when volcanism originates on the deep sea floor; (2) shield, when roughly 95 percent of a volcano's volume is emplaced; (3) post-shield alkalic, when small-volume eruptions build scattered cones that thinly cap the shield-stage lavas; and (4) rejuvenated, when lavas of distinct chemistry erupt following a lengthy period of erosion and volcanic quiescence. During the early alkalic and shield stages, two or more elongate rift zones may develop as flanks of the volcano separate. Mantle-derived magma rises through a vertical conduit and is temporarily stored in a shallow summit reservoir from which magma may erupt within the summit region or be injected laterally into the rift zones. The ongoing activity at Kilauea's Pu?u ?O?o cone that began in January 1983 is one such rift-zone eruption. The rift zones commonly extend deep underwater, producing submarine eruptions of bulbous pillow lava. Once a volcano has grown above sea level, subaerial eruptions produce lava flows of jagged, clinkery ?a?a or smooth, ropy pahoehoe. If the flows reach the ocean they are rapidly quenched by seawater and shatter, producing a steep blanket of unstable volcanic sediment that mantles the upper submarine slopes. Above sea level then, the volcanoes develop the classic shield profile of gentle lava-flow slopes, whereas below sea level slopes are substantially steeper. While the volcanoes grow rapidly during the shield stage, they may also collapse catastrophically, generating giant landslides and tsunami, or fail more gradually, forming slumps. Deformation and seismicity along Kilauea's south flank indicate that slumping is occurring there today. Loading of the underlying Pacific Plate by the growing volcanic edifices causes subsidence, forming deep basins at the base of the volcanoes. Once volcanism wanes and lava flows no longer reach the ocean, the volcano continues to submerge, while

  12. Hydrothermal Evolution of the Giant Cenozoic Kadjaran porphyry Cu-Mo deposit, Tethyan metallogenic belt, Armenia, Lesser Caucasus: mineral paragenetic, cathodoluminescence and fluid inclusion constraints (United States)

    Hovakimyan, Samvel; Moritz, Robert; Tayan, Rodrik; Rezeau, Hervé


    stockwork. One of them is the east-west-oriented 6th vein zone in the northern part of the deposit, which contains quartz-molybdenite veins and late quartz-galena-sphalerite veins. This is interpreted as a telescoping between porphyry and epithermal environments. It is supported by microscopic studies of mineral paragenesis, which reveal the presence of enargite and tennantite-tetrahedrite, luzonite, sphalerite, and galena, generally in a gangue of quartz, followed by a late carbonate and gypsum stage. On-going fluid inclusion studies are being carried out on quartz samples from the different mineralization stages. Five types of fluid inclusions were distinguished according to their nature, bubble size, and daughter mineral content: vapor-rich, aqueous-carbonic, brine, polyphase brine and liquid-rich inclusions. Cathodoluminescence images from the porphyry veins reveal four generations of quartz. Molybdenite and chalcopyrite are associated with two different dark luminescent quartz generations, which contain typical brine, aqueous-carbonic and vapour-rich H2O fluid inclusions, with some of them coexisting locally as boiling assemblages. Epithermal veins are mainly characterized by liquid-rich H2O fluid inclusions. Microthermometric studies of fluid inclusions reveal a major difference in homogenisation temperatures between the early quartz-molybdenite- chalcopyrite stage (Thtotal between 3600 and 4250C) and the late quartz-galena-sphalerite vein stage (Thtotal 300-2700C), which is attributed to the transition from a porphyry to an epithermal environment in the Kadjaran deposit.

  13. Chemistry of plutonium revealed

    International Nuclear Information System (INIS)

    Connick, R.E.


    In 1941 one goal of the Manhattan Project was to unravel the chemistry of the synthetic element plutonium as rapidly as possible. In this paper the work carried out at Berkeley from the spring of 1942 to the summer of 1945 is described briefly. The aqueous chemistry of plutonium is quite remarkable. Important insights were obtained from tracer experiments, but the full complexity was not revealed until macroscopic amounts (milligrams) became available. Because processes for separation from fission products were based on aqueous solutions, such solution chemistry was emphasized, particularly precipitation and oxidation-reduction behavior. The latter turned out to be unusually intricate when it was discovered that two more oxidation states existed in aqueous solution than had previously been suspected. Further, an equilibrium was rapidly established among the four aqueous oxidation states, while at the same time any three were not in equilibrium. These and other observations made while doing a crash study of a previously unknown element are reported

  14. Android Emotions Revealed

    DEFF Research Database (Denmark)

    Vlachos, Evgenios; Schärfe, Henrik


    This work presents a method for designing facial interfaces for sociable android robots with respect to the fundamental rules of human affect expression. Extending the work of Paul Ekman towards a robotic direction, we follow the judgment-based approach for evaluating facial expressions to test...... findings are based on the results derived from a number of judgments, and suggest that before programming the facial expressions of a Geminoid, the Original should pass through the proposed procedure. According to our recommendations, the facial expressions of an android should be tested by judges, even...... in which case an android robot like the Geminoid|DK –a duplicate of an Original person- reveals emotions convincingly; when following an empirical perspective, or when following a theoretical one. The methodology includes the processes of acquiring the empirical data, and gathering feedback on them. Our...

  15. From School of Rock to Building Core Knowledge: Teaching about Cenozoic climate change with data and case studies from the primary literature (United States)

    Leckie, R. M.; St John, K. K.; Jones, M. H.; Pound, K. S.; Krissek, L. A.; Peart, L. W.


    The School of Rock (SoR) began in 2005 as a pilot geoscience professional development program for K-12 teachers and informal educators aboard the JOIDES Resolution (JR). Since then, the highly successful SoR program, sponsored by the Consortium for Ocean Leadership's Deep Earth Academy, has conducted on-shore professional development at the Integrated Ocean Drilling Program (IODP) core repository in College Station, TX, and on the JR. The success of the SoR program stems from the natural synergy that develops between research scientists and educators when their combined pedagogical skills and scientific knowledge are used to uncover a wealth of scientific ocean drilling discoveries and research findings. Educators are challenged with authentic inquiry based on sediment archives; these lessons from the past are then made transferable to the general public and to classrooms through the creation of age-appropriate student-active learning materials ( This science made accessible approach was the basis for a successful NSF Course Curriculum and Laboratory Improvement (CCLI) proposal to develop teaching materials for use at the college level. Our Building Core Knowledge project resulted in a series of 14 linked, yet independent, inquiry-based exercise modules around the theme of Reconstructing Earth's Climate History. All of the exercises build upon authentic data from peer reviewed scientific publications. These multiple part modules cover fundamental paleoclimate principles, tools and proxies, and Cenozoic case studies. It is important to teach students how we know what we know. For example, paleoclimate records must be systematically described, ages must be determined, and indirect evidence (i.e., proxies) of past climate must be analyzed. Much like the work of a detective, geoscientists and paleoclimatologists reconstruct what happened in the past, and when and how it

  16. 40Ar/39Ar Geochronology of Supergene K-bearing Sulfate Minerals: Cenozoic Continental Weathering, Landscape Evolution and Paleoclimates in the Tu-Ha Basin, Northwestern China (United States)

    Yang, J.; Zheng, D.; Chen, W.; Hough, B.; Qiu, H.; Wang, W.; Wu, Y.; Yang, L.


    40Ar/39Ar incremental-heating analyses of supergene jarosite and yavapaiite from three weathering profiles at the Hongshan, Liuhuangshan, and Caihuagou deposits in the Tu-Ha Basin, China, were carried out to provide numerical constraints on the timing and duration of weathering and derive insights into local paleoclimatic and landscape evolution. Well-constrained plateau ages and best-fitting inverse isochrons have been obtained for 11 samples, yield 40Ar/39Ar ages ranging from 33.3±0.5 Ma to 3.3±0.4 Ma (1σ). Our 40Ar/39Ar ages, combined with the published ages, indicate that the high elevations sites hosting the most complete and complex weathering profiles present. The presence of ancient weathering ages in current outcrop in the Tu-Ha Basin suggests that denudation was not homogeneous, and the landscape evolution follow a scarp retreat model. These geochronological results suggest that a protracted history of weathering and supergene enrichment and, by inference, arid-semiarid climate (with at least a moderate amount of precipitation (>10 cm/y)) favorable to intense chemical weathering emerged at 33.3 Ma, 27.7-23.3 Ma, and 16.4-14.7 Ma, and prevailed from 11-7.8 Ma. Then, a progressive change from arid-semiarid towards hyperarid conditions and predominantly hyperarid conditions may have persisted since at least ca. 3.3 Ma. The climatic implications inferred from the weathering geochronology are in agreement with the chemical parameters and isotopic compositions of the Cenozoic sedimentary sequence from the Lianmuqin section in the Tu-Ha Basin, attesting to the reliability of weathering geochronology by the 40Ar/39Ar method as an indicator of paleoclimate in arid areas. Our results suggest that the retreat of the Paratethys Sea, which would have reduced eastward water vapor transport by the westerlies to the Tu-Ha Basin, led to its aridification in the Oligocene and that increased rain shadow effects, resulting from uplift of the Tibetan Plateau and Tian Shan

  17. Geomorphic Evidence of a Complex late-Cenozoic Uplift and Lateral Displacement History Along the 2013 M7.7 Baluchistan, Pakistan Strike-slip Rupture (United States)

    Harbor, D. J.; Barnhart, W. D.


    The 2013 M7.7 Baluchistan earthquake in southern Pakistan ruptured 200 km of the north-dipping Hoshab reverse fault with dominantly lateral motion, clearly at odds with the regional topography created by previous reverse fault offsets. The kinematics of this earthquake led to the hypotheses that the Hoshab fault may alternatively slip in a reverse and lateral sense (bi-modal slip), and that the southeast Makran rotates as a uniform block around the fault (ball-and-socket rotation). Here, we use river profiles, regional relief, fault locations, and detailed geomorphic maps derived from optical imagery and DEMs to evaluate the recent uplift history of this region. We find that late Cenozoic fault zone geomorphology supports a spatially complex transition from lateral-dominated offsets in the NE to reverse-dominated offsets in the SW. Additionally, fault zone geomorphology suggests that the location of the Hoshab fault itself may change through time, leading to active incision of footwall alluvial fans and pediments. Stream profiles likewise record incision patterns that vary along the Hoshab fault. Incision and deposition in the SW are illustrative of relative footwall subsidence, consistent with recent uplift on the Hoshab fault; whereas incision and deposition in the NE are illustrative of relative footwall uplift consistent with ongoing regional uplift due to ball-and-socket rotations and dominantly lateral offsets along the northern Hoshab fault. The largest streams also record multiple, discrete, base-level drops, including the presence of convex-up river profiles in the hanging wall of the Hoshab fault. These profiles along hanging wall streams highlight a complex spatial and temporal history of reverse offset, lateral channel offset, and base-level resetting in regional streams that are altogether inconsistent with the kinematics of the 2013 earthquake alone, but that are consistent with the bi-modal slip model. Additionally, the evidence of footwall uplift in

  18. Chapter B: Regional Geologic Setting of Late Cenozoic Lacustrine Diatomite Deposits, Great Basin and Surrounding Region: Overview and Plans for Investigation (United States)

    Wallace, Alan R.


    Freshwater diatomite deposits are present in all of the Western United States, including the Great Basin and surrounding regions. These deposits are important domestic sources of diatomite, and a better understanding of their formation and geologic settings may aid diatomite exploration and land-use management. Diatomite deposits in the Great Basin are the products of two stages: (1) formation in Late Cenozoic lacustrine basins and (2) preservation after formation. Processes that favored long-lived diatom activity and diatomite formation range in decreasing scale from global to local. The most important global process was climate, which became increasingly cool and dry from 15 Ma to the present. Regional processes included tectonic setting and volcanism, which varied considerably both spatially and temporally in the Great Basin region. Local processes included basin formation, sedimentation, hydrology, and rates of processes, including diatom growth and accumulation; basin morphology and nutrient and silica sources were important for robust activity of different diatom genera. Only optimum combinations of these processes led to the formation of large diatomite deposits, and less than optimum combinations resulted in lakebeds that contained little to no diatomite. Postdepositional processes can destroy, conceal, or preserve a diatomite deposit. These processes, which most commonly are local in scale, include uplift, with related erosion and changes in hydrology; burial beneath sedimentary deposits or volcanic flows and tuffs; and alteration during diagenesis and hydrothermal activity. Some sedimentary basins that may have contained diatomite deposits have largely been destroyed or significantly modified, whereas others, such as those in western Nevada, have been sufficiently preserved along with their contained diatomite deposits. Future research on freshwater diatomite deposits in the Western United States and Great Basin region should concentrate on the regional

  19. Elemental and Sr-Nd isotopic geochemistry of Cretaceous to Early Paleogene granites and volcanic rocks in the Sikhote-Alin Orogenic Belt (Russian Far East): implications for the regional tectonic evolution (United States)

    Zhao, Pan; Jahn, Bor-ming; Xu, Bei


    The Sikhote-Alin Orogenic Belt in Russian Far East is an important Late Mesozoic to Early Cenozoic accretionary orogen related to the subduction of the Paleo-Pacific Plate. This belt was generated by successive accretion of terranes made of accretionary prisms, turbidite basins and island arcs to the continental margin of northeastern Asia (represented by the Bureya-Jiamusi-Khanka Block) from Jurassic to Late Cretaceous. In order to study the tectonic and crustal evolution of this orogenic belt, we carried out zircon U-Pb dating, and whole-rock elemental and Sr-Nd isotopic analyses on granites and volcanic rocks from the Primorye region of southern Sikhote-Alin. Zircon dating revealed three episodes of granitoid emplacement: Permian, Early Cretaceous and Late Cretaceous to Early Paleogene. Felsic volcanic rocks (mainly rhyolite, dacite and ignimbrite) that overlay all tectonostratigraphic terranes were erupted during 80-57 Ma, postdating the accretionary process in the Sikhote-Alin belt. The Cretaceous-Paleogene magmatism represents the most intense tectonothermal event in the Sikhote-Alin belt. Whole-rock major and trace elemental data show arc-like affinity for granitoids and volcanic rocks, indicating that they were likely generated in a supra-subduction setting. Their initial 87Sr/86Sr ratios range from 0.7048 to 0.7114, and εNd(t) values vary from +1.7 to -3.8 (mostly < 0). Thus, the elemental and Sr-Nd isotopic data suggest that the felsic magmas were generated by partial melting of source rocks comprising mantle-derived juvenile component and recycled crustal component. In addition to the occurrence in the Sikhote-Alin orogenic belt, Cretaceous to Early Paleogene magmatic rocks are also widespread in NE China, southern Korean peninsula, Japanese islands and other areas of Russian Far East, particularly along the coastal regions of the Okhotsk and Bering Seas. These rocks constitute an extended magmatic belt along the continental margin of NE Asia. The

  20. Selective phosphorylation during early macrophage differentiation

    KAUST Repository

    Zhang, Huoming; Qian, Pei-Yuan; Ravasi, Timothy


    -regulated phosphoproteins in the early stages of differentiation. Further analysis of the PMA-regulated phosphoproteins revealed that transcriptional suppression, cytoskeletal reorganization and cell adhesion were among the most significantly activated pathways. Some key

  1. Nevada Thickness of Cenozoic Deposits (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This study of gravity data from Nevada is part of a statewide analysis of mineral resources. The main objective of the gravity study were: 1) to infer the structure...

  2. A major reorganization of Asian climate by the early Miocene

    Directory of Open Access Journals (Sweden)

    Z. T. Guo


    Full Text Available The global climate system experienced a series of drastic changes during the Cenozoic. In Asia, these include the climate transformation from a zonal pattern to a monsoon-dominated pattern, the disappearance of typical subtropical aridity, and the onset of inland deserts. Despite major advances in the last two decades in characterizing and understanding these climate phenomena, disagreements persist relative to the timing, behaviors and underlying causes.

    This paper addresses these issues mainly based on two lines of evidence. First, we compiled newly collected data from geological indicators of the Cenozoic environment in China as paleoenvironmental maps of ten intervals. In confirming the earlier observation that a zonal climate pattern was transformed into a monsoonal one, the maps within the Miocene indicate that this change was achieved by the early Miocene, roughly consistent with the onset of loess deposition in China. Although a monsoon-like regime would have existed in the Eocene, it was restricted to tropical-subtropical regions. The latitudinal oscillations of the climate zones during the Paleogene are likely attributable to the imbalance in evolution of polar ice-sheets between the two hemispheres.

    Secondly, we examine the relevant depositional and soil forming processes of the Miocene loess-soil sequences to determine the circulation characteristics with emphasis on the early Miocene. Continuous eolian deposition in the middle reaches of the Yellow River since the early Miocene firmly indicates the formation of inland deserts, which have been constantly maintained during the past 22 Ma. Grain-size gradients between loess sections indicate northerly dust-carrying winds from northern sources, a clear indication of an Asian winter monsoon system. Meanwhile, well-developed Luvisols show evidence that moisture from the oceans reached northern China. This evidence shows the coexistence of two kinds of

  3. Archean greenstone-tonalite duality: Thermochemical mantle convection models or plate tectonics in the early Earth global dynamics? (United States)

    Kerrich, Robert; Polat, Ali


    Mantle convection and plate tectonics are one system, because oceanic plates are cold upper thermal boundary layers of the convection cells. As a corollary, Phanerozoic-style of plate tectonics or more likely a different version of it (i.e. a larger number of slowly moving plates, or similar number of faster plates) is expected to have operated in the hotter, vigorously convecting early Earth. Despite the recent advances in understanding the origin of Archean greenstone-granitoid terranes, the question regarding the operation of plate tectonics in the early Earth remains still controversial. Numerical model outputs for the Archean Earth range from predominantly shallow to flat subduction between 4.0 and 2.5 Ga and well-established steep subduction since 2.5 Ga [Abbott, D., Drury, R., Smith, W.H.F., 1994. Flat to steep transition in subduction style. Geology 22, 937-940], to no plate tectonics but rather foundering of 1000 km sectors of basaltic crust, then "resurfaced" by upper asthenospheric mantle basaltic melts that generate the observed duality of basalts and tonalities [van Thienen, P., van den Berg, A.P., Vlaar, N.J., 2004a. Production and recycling of oceanic crust in the early earth. Tectonophysics 386, 41-65; van Thienen, P., Van den Berg, A.P., Vlaar, N.J., 2004b. On the formation of continental silicic melts in thermochemical mantle convection models: implications for early Earth. Tectonophysics 394, 111-124]. These model outputs can be tested against the geological record. Greenstone belt volcanics are composites of komatiite-basalt plateau sequences erupted from deep mantle plumes and bimodal basalt-dacite sequences having the geochemical signatures of convergent margins; i.e. horizontally imbricated plateau and island arc crust. Greenstone belts from 3.8 to 2.5 Ga include volcanic types reported from Cenozoic convergent margins including: boninites; arc picrites; and the association of adakites-Mg andesites- and Nb-enriched basalts. Archean cratons

  4. Titan Casts Revealing Shadow (United States)


    A rare celestial event was captured by NASA's Chandra X-ray Observatory as Titan -- Saturn's largest moon and the only moon in the Solar System with a thick atmosphere -- crossed in front of the X-ray bright Crab Nebula. The X-ray shadow cast by Titan allowed astronomers to make the first X-ray measurement of the extent of its atmosphere. On January 5, 2003, Titan transited the Crab Nebula, the remnant of a supernova explosion that was observed to occur in the year 1054. Although Saturn and Titan pass within a few degrees of the Crab Nebula every 30 years, they rarely pass directly in front of it. "This may have been the first transit of the Crab Nebula by Titan since the birth of the Crab Nebula," said Koji Mori of Pennsylvania State University in University Park, and lead author on an Astrophysical Journal paper describing these results. "The next similar conjunction will take place in the year 2267, so this was truly a once in a lifetime event." Animation of Titan's Shadow on Crab Nebula Animation of Titan's Shadow on Crab Nebula Chandra's observation revealed that the diameter of the X-ray shadow cast by Titan was larger than the diameter of its solid surface. The difference in diameters gives a measurement of about 550 miles (880 kilometers) for the height of the X-ray absorbing region of Titan's atmosphere. The extent of the upper atmosphere is consistent with, or slightly (10-15%) larger, than that implied by Voyager I observations made at radio, infrared, and ultraviolet wavelengths in 1980. "Saturn was about 5% closer to the Sun in 2003, so increased solar heating of Titan may account for some of this atmospheric expansion," said Hiroshi Tsunemi of Osaka University in Japan, one of the coauthors on the paper. The X-ray brightness and extent of the Crab Nebula made it possible to study the tiny X-ray shadow cast by Titan during its transit. By using Chandra to precisely track Titan's position, astronomers were able to measure a shadow one arcsecond in

  5. Mantle upwellings and convective instabilities revealed by seismic tomography and helium isotope geochemistry beneath eastern Africa (United States)

    Montagner, Jean-Paul; Marty, Bernard; Stutzmann, Eléonore; Sicilia, Déborah; Cara, Michel; Pik, Raphael; Lévêque, Jean-Jacques; Roult, Geneviève; Beucler, Eric; Debayle, Eric


    The relationship between intraplate volcanism and continental tectonics has been investigated for North and East Africa using a high resolution three-dimensional anisotropic tomographic model derived from seismic data of a French experiment ``Horn of Africa'' and existing broadband data. The joint inversion for seismic velocity and anisotropy of the upper 400 km of the mantle, and geochemical data reveals a complex interaction between mantle upwellings, and lithosphere. Two kinds of mantle upwellings can be distinguished: The first one, the Afar ``plume'' originates from deeper than 400 km and is characterized by enrichment in primordial 3He and 3He/4He ratios higher than those along mid-ocean ridges (MOR). The second one, associated with other Cenozoic volcanic provinces (Darfur, Tibesti, Hoggar, Cameroon), with 3He/4He ratios similar to, or lower than MOR, is a consequence of shallower upwelling. The presumed asthenospheric convective instabilities are oriented in an east-west direction, resulting from interaction between south-north asthenospheric mantle flow, main plume head and topography on the base of lithosphere.

  6. Explaining Why Early-Maturing Girls Are More Exposed to Sexual Harassment in Early Adolescence (United States)

    Skoog, Therése; Bayram Özdemir, Sevgi


    In this study, we tested two competing explanations of the previously established link between early female puberty and sexual harassment in early adolescence. The sample included 680 seventh-grade Swedish girls (M[subscript age] = 13.40, SD = 0.53). Findings revealed that looking more sexually mature and being sexually active mediated the link…

  7. Early or Premature Menopause (United States)

    ... email updates Enter email Submit Early or premature menopause Menopause that happens before age 40 is called ... What is the difference between early and premature menopause? Early or premature menopause happens when ovaries stop ...

  8. Early hospital discharge and early puerperal complications. (United States)

    Ramírez-Villalobos, Dolores; Hernández-Garduño, Adolfo; Salinas, Aarón; González, Dolores; Walker, Dilys; Rojo-Herrera, Guadalupe; Hernández-Prado, Bernardo


    To evaluate the association between time of postpartum discharge and symptoms indicative of complications during the first postpartum week. Women with vaginal delivery at a Mexico City public hospital, without complications before the hospital discharge, were interviewed seven days after delivery. Time of postpartum discharge was classified as early (25 hours). The dependent variable was defined as the occurrence and severity of puerperal complication symptoms. Out of 303 women, 208 (68%) were discharged early. However, women with early discharge and satisfactory prenatal care had lower odds of presenting symptoms in early puerperium than women without early discharge and inadequate prenatal care (OR 0.36; 95% confidence intervals = 0.17-0.76). There was no association between early discharge and symptoms of complications during the first postpartum week; the odds of complications were lower for mothers with early discharge and satisfactory prenatal care.

  9. 85 million years of pelagic ecosystem evolution: Pacific Ocean deep-sea ichthyolith records reveal fish community dynamics and a long-term decline in sharks (United States)

    Sibert, E. C.; Norris, R. D.; Cuevas, J. M.; Graves, L. G.


    The structure and productivity of open ocean consumers has undergone major changes over the past 85 million years. Here, we present the first long-term detailed records of pelagic fish and sharks utilizing the record of ichthyoliths (teeth and dermal scales) from the deep Pacific Ocean. While the North and South Pacific Oceans show similar patterns throughout the 85 million year history, the North Pacific ichthyolith accumulation is significantly higher than the South Pacific, suggesting that the basin has been a more productive region for tens of millions of years. Fish and sharks were not abundant in the Pacific gyres until ~75 million years ago (Ma) suggesting that neither group was quantitatively important in oligotrophic pelagic food webs prior to the latest Cretaceous. Relative to ray-finned fish, sharks were common in the ancient ocean. Most ichthyolith assemblages have >50% shark dermal scales (denticles), but denticle abundance has been declining in both absolute and relative abundance since the Cretaceous-Paleogene (K/Pg) mass extinction. The accumulation rate of ichthyoliths of both sharks and ray-finned fish was highest in the Early Eocene, during the peak of the Cenozoic 'greenhouse' climate where production of shark dermal denticles and fish teeth increased almost five times over Paleocene production rates. Ichthyolith fluxes fell with cooler climates in the later Eocene and Oligocene, but fish production is almost always higher than in the Cretaceous and Paleocene reflecting the expanded ecological roles and importance of pelagic fish in marine ecosystems. Shark denticle production fell to less than half that of the Cretaceous by 20 Ma when it dropped abruptly to near-zero levels. Currently denticles make up sharks appear to be falling as major pelagic consumers over the Late Cretaceous and Cenozoic, and particularly over the past 20 Ma, perhaps reflecting demographic changes in shark and fish communities, or the rise of resource competition from

  10. The Origin of Basalt and Cause of Melting Beneath East Antarctica as Revealed by the Southernmost Volcanoes on Earth (United States)

    Reindel, J. L.; Panter, K. S.; Smellie, J. L.; McIntosh, W. C.


    Mt. Early and Sheridan Bluff are two basaltic monogenetic volcanoes located at 87° South latitude at the head of the Scott Glacier. These Early Miocene volcanoes lie 800 km from any other volcano and 200 km inland from the shoulder of the West Antarctic Rift System (WARS), which is the foci of most Cenozoic alkaline volcanism in Antarctica. Preliminary 40Ar/39Ar dates suggest that Mt. Early is older than previously determined and closer in age to Sheridan Bluff ( 19 Ma). Petrography, mineral chemistry and whole rock major and trace element concentrations are used to characterize the basalts and to determine whether they are genetically related to mafic volcanism in the WARS. The basalts are porphyritic with phenocrysts of olivine (Fo 58-84%), plagioclase (An 48-67%) ± clinopyroxene (Wo 43-48%). Whole rock MgO range from 10 to 4 wt.% and have restricted SiO2 (48 to 50 wt.%) contents. The basalts vary from alkaline (up to 6 wt.% Ne-normative) to subalkaline (up to 6 wt.% Hy-normative). The alkaline basalts that occur at both Mt. Early and Sheridan Bluff are more strongly enriched in incompatible elements (La 33-49 ppm, Ba 270-484 ppm, Sr 712-1009 ppm), have LaN/YbN ratios >10 and show prominent Pb negative anomalies with only slight K negative anomalies on primitive mantle normalized, multi-element diagrams. Subalkaline basalts (only at Sheridan Bluff) have lower concentrations of incompatible elements (La 14-16 ppm, Ba 110-144 ppm, and Sr 358-380 ppm), LaN/YbN ratios base of the East Antarctic craton and its replacement by warmer asthenosphere has been proposed for this region based on geophysical evidence (Heeszel et al., 2016). The volcanism may constrain the timing of this event. Heeszel et al. (2016) JGR, 121, 1758-1775.

  11. [Localized purpura revealing vascular prosthetic graft infection]. (United States)

    Boureau, A S; Lescalie, F; Cassagnau, E; Clairand, R; Connault, J


    Prosthetic graft infection after vascular reconstruction is a rare but serious complication. We report a case of infection occurring late after implantation of an iliofemoral prosthetic vascular graft. The Staphylococcus aureus infection was revealed by vascular purpura localized on the right leg 7 years after implantation of a vascular prosthesis. This case illustrates an uncommonly late clinical manifestation presenting as an acute infection 7 years after the primary operation. In this situation, the presentation differs from early infection, which generally occurs within the first four postoperative months. Diagnosis and treatment remain a difficult challenge because prosthetic graft infection is a potentially life-threatening complication. Morbidity and mortality rates are high. Here we detail specific aspects of the clinical and radiological presentation. Copyright © 2013 Elsevier Masson SAS. All rights reserved.

  12. The early Eocene birds of the Messel fossil site: a 48 million-year-old bird community adds a temporal perspective to the evolution of tropical avifaunas. (United States)

    Mayr, Gerald


    Birds play an important role in studies addressing the diversity and species richness of tropical ecosystems, but because of the poor avian fossil record in all extant tropical regions, a temporal perspective is mainly provided by divergence dates derived from calibrated molecular analyses. Tropical ecosystems were, however, widespread in the Northern Hemisphere during the early Cenozoic, and the early Eocene German fossil site Messel in particular has yielded a rich avian fossil record. The Messel avifauna is characterized by a considerable number of flightless birds, as well as a high diversity of aerial insectivores and the absence of large arboreal birds. With about 70 currently known species in 42 named genus-level and at least 39 family-level taxa, it approaches extant tropical biotas in terms of species richness and taxonomic diversity. With regard to its taxonomic composition and presumed ecological characteristics, the Messel avifauna is more similar to the Neotropics, Madagascar, and New Guinea than to tropical forests in continental Africa and Asia. Because the former regions were geographically isolated during most of the Cenozoic, their characteristics may be due to the absence of biotic factors, especially those related to the diversification of placental mammals, which impacted tropical avifaunas in Africa and Asia. The crown groups of most avian taxa that already existed in early Eocene forests are species-poor. This does not support the hypothesis that the antiquity of tropical ecosystems is key to the diversity of tropical avifaunas, and suggests that high diversification rates may be of greater significance. © 2016 Cambridge Philosophical Society.

  13. Structure of an inverted basin from subsurface and field data: the Late Jurassic-Early Cretaceous Maestrat Basin (Iberian Chain)

    Energy Technology Data Exchange (ETDEWEB)

    Nebot, M.; Guimera, J.


    The Maestrat Basin experienced two main rifting events: Late Permian-Late Triassic and Late Jurassic-Early Cretaceous, and was inverted during the Cenozoic Alpine orogeny. During the inversion, an E-W-trending, N-verging fold-and-thrust belt developed along its northern margin, detached in the Triassic evaporites, while southwards it also involved the Variscan basement. A structural study of the transition between these two areas is presented, using 2D seismic profiles, exploration wells and field data, to characterize its evolution during the Mesozoic extension and the Cenozoic contraction. The S-dipping Maestrat basement thrust traverses the Maestrat Basin from E to W; it is the result of the Cenozoic inversion of the lower segment–within the acoustic basement–of the Mesozoic extensional fault system that generated the Salzedella sub-basin. The syn-rift Lower Cretaceous rocks filling the Salzedella sub-basin thicken progressively northwards, from 350m to 1100m. During the inversion, a wide uplifted area –40km wide in the N-S direction– developed in the hanging wall of the Maestrat basement thrust. This uplifted area is limited to the North by the E-W-trending Calders monocline, whose limb is about 13km wide in its central part, dips about 5ºN, and generates a vertical tectonic step of 800-1200m. We interpreted the Calders monocline as a fault-bend fold; therefore, a flat-ramp-flat geometry is assumed in depth for the Maestrat basement thrust. The northern synformal hinge of the Calders monocline coincides with the transition from thick-skinned to thin-skinned areas. The vast uplifted area and the low-dip of the monocline suggest a very low-dip for the basement ramp, rooted in the upper crust. The Calders monocline narrows and disappears laterally, in coincidence with the outcrop of the Maestrat basement thrust. The evaporitic Middle Muschelkalk detachment conditioned the structural style. Salt structures are also related to it; they developed during the

  14. Cerebral imaging revealing Alzheimer's disease

    International Nuclear Information System (INIS)


    Cerebral imaging is the only non-invasive means of examining the brain and is essential in studying Alzheimer's disease. As a tool for early diagnosis, evaluation and treatment monitoring, this technology is at the heart of the research being done to further improve its reliability and sensitivity. (authors)

  15. Early Childhood Systems: Transforming Early Learning (United States)

    Kagan, Sharon Lynn, Ed.; Kauertz, Kristie, Ed.


    In this seminal volume, leading authorities strategize about how to create early childhood systems that transcend politics and economics to serve the needs of all young children. The authors offer different interpretations of the nature of early childhood systems, discuss the elements necessary to support their development, and examine how…

  16. Long-term Consequences of Early Parenthood

    DEFF Research Database (Denmark)

    Johansen, Eva Rye; Nielsen, Helena Skyt; Verner, Mette

    (and to lesser extent employment), as fathers appear to support the family, especially when early parenthood is combined with cohabitation with the mother and the child. Heterogeneous effects reveal that individuals with a more favorable socioeconomic background are affected more severely than......Having children at an early age is known to be associated with unfavorable economic outcomes, such as lower education, employment and earnings. In this paper, we study the long-term consequences of early parenthood for mothers and fathers. Our study is based on rich register-based data that......, importantly, merges all childbirths to the children’s mothers and fathers, allowing us to study the consequences of early parenthood for both parents. We perform a sibling fixed effects analysis in order to account for unobserved family attributes that are possibly correlated with early parenthood...

  17. Precursors of adolescent substance use from early childhood and early adolescence: testing a developmental cascade model. (United States)

    Sitnick, Stephanie L; Shaw, Daniel S; Hyde, Luke W


    This study examined developmentally salient risk and protective factors of adolescent substance use assessed during early childhood and early adolescence using a sample of 310 low-income boys. Child problem behavior and proximal family risk and protective factors (i.e., parenting and maternal depression) during early childhood, as well as child and family factors and peer deviant behavior during adolescence, were explored as potential precursors to later substance use during adolescence using structural equation modeling. Results revealed that early childhood risk and protective factors (i.e., child externalizing problems, mothers' depressive symptomatology, and nurturant parenting) were indirectly related to substance use at the age of 17 via risk and protective factors during early and middle adolescence (i.e., parental knowledge and externalizing problems). The implications of these findings for early prevention and intervention are discussed.

  18. Early stages of formation and dispersal of the temperate flora in the Boreal region

    International Nuclear Information System (INIS)

    Budantsev, L.Y.


    The thesis of this review is that the composition of a flora can be understood only as a process, or separate stage, in the context of migration in time and space of various floristic assemblages and their isolation, as induced by transformation of continental and ocean shapes, changes in climate, and the environment as a whole. Thus the formation of geofloras of the past was influenced by gradually changing environments that determined the spread, patterning, and spatial differentiation of floras and their evolution. Parallel to the more commonly-seen names of eras-Paleozoic, Mesozoic, and Cenozoic-we can speak of the Paleophytic, Mesophytic, and Cenophytic eras. Eras defined in these two ways (by faunistic or by floristic criteria) do not completely coincide. Generally, changes in the flora have, necessarily, preceded changes in the fauna. It is the Cenophytic with which this review is mostly concerned, the era of Angiosperm dominance. The movement of early subtropical and warm temperate floras in the Early Cenophytic, followed by temperate or even boreal floras, as the climate changes, is traced in detail

  19. An early Oligocene fossil demonstrates treeshrews are slowly evolving "living fossils". (United States)

    Li, Qiang; Ni, Xijun


    Treeshrews are widely considered a "living model" of an ancestral primate, and have long been called "living fossils". Actual fossils of treeshrews, however, are extremely rare. We report a new fossil species of Ptilocercus treeshrew recovered from the early Oligocene (~34 Ma) of China that represents the oldest definitive fossil record of the crown group of treeshrews and nearly doubles the temporal length of their fossil record. The fossil species is strikingly similar to the living Ptilocercus lowii, a species generally recognized as the most plesiomorphic extant treeshrew. It demonstrates that Ptilocercus treeshrews have undergone little evolutionary change in their morphology since the early Oligocene. Morphological comparisons and phylogenetic analysis support the long-standing idea that Ptilocercus treeshrews are morphologically conservative and have probably retained many characters present in the common stock that gave rise to archontans, which include primates, flying lemurs, plesiadapiforms and treeshrews. This discovery provides an exceptional example of slow morphological evolution in a mammalian group over a period of 34 million years. The persistent and stable tropical environment in Southeast Asia through the Cenozoic likely played a critical role in the survival of such a morphologically conservative lineage.

  20. Revealed preference with limited consideration

    NARCIS (Netherlands)

    Demuynck, T.; Seel, C.


    We derive revealed preference tests for models where individuals use consideration sets to simplify their consumption problem. Our basic test provides necessary and sufficient conditions for consistency of observed choices with the existence of consideration set restrictions. The same conditions can

  1. Decision Making and Revealed Preference

    DEFF Research Database (Denmark)

    de la Rosa, Leonidas Enrique

    If our decision-making processes are to some extent shaped by evolutionary pressures and our environment is different from that to which we adapted, some of our choices will not be in our best interest. But revealed preference is the only tool that we have so far to conduct a normative analysis...

  2. Early discharge following birth

    DEFF Research Database (Denmark)

    Nilsson, Ingrid M. S.; Kronborg, Hanne; Knight, Christopher H.


    .26–0.48) and primiparous compared to multiparous had an OR of 0.22 (CI 0.17–0.29) for early discharge. Other predictors for early discharge were: no induction of labour, no epidural painkiller, bleeding less than 500 ml during delivery, higher gestational age, early expected discharge and positive breastfeeding experience...

  3. Uniquely Acquired Vintage Seismic Reflection Data Reveal the Stratigraphic and Tectonic History of the Montana Disturbed Belt, USA (United States)

    Speece, M. A.; Link, C. A.; Stickney, M.


    techniques including linear noise suppression of the air wave and ground roll, refraction statics, and prestack migration. Reprocessing of these data using state-of-the-art seismic reflection processing techniques will provide a detailed picture of the stratigraphy and tectonic framework for this region. Moreover, extended correlations of the Vibroseis records to Moho depths might reveal new insights on crustal thickness and provide a framework for understanding crustal thickening during the Laramide Orogeny as well as later Cenozoic extension.

  4. Implementing Children's Rights in Early Education (United States)

    Te One, Sarah


    Recent research (Te One, 2009) investigated perceptions of children's rights in a New Zealand early childhood care and education service (the Creche) for under-two-year-olds. Focus group interviews, interviews with teachers, observational field notes, photographs and a researcher's journal were used to generate data. Findings revealed that…

  5. Analysis on depositional system and discussion on ore-formation conditions of channel sandstone type uranium deposit. Taking Dongsheng area, Ordos meso-cenozoic basin as an example

    International Nuclear Information System (INIS)

    Wu Rengui; Yu Dagan; Zhu Minqiang; Zhou Wanpeng; Chen Anping


    Applying the theory of depositional system, the depositional facies and depositional systems of the Zhiluo Formation in Dongsheng area are systematically analysed, and the authors proposed that sediments of the Zhiluo Formation are of fluvial facies, and streams of the Zhiluo time experienced three evolution stages, namely: the early braided stream, the middle low sinuosity meandering stream and the late high sinuosity meandering stream. Based on features of paleoclimatic evolution, the Zhiluo Formation is divided into two lithological members. The lower lithological member consists of sediments of braided and low sinuosity meandering streams under humid-ward paleoclimatic conditions forming grey sedimentary formation. The upper member is composed of sediments of meandering streams under arid-hot paleoclimatic conditions representing complex-colored (mainly red) sedimentary formation. It is suggested that uranium mineralization in the study area is of channel sandstone type and controlled by braided channel sediments. Besides, the ore-formation conditions for chann