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Sample records for restored oyster reef

  1. Gear and survey efficiency of patent tongs for oyster populations on restoration reefs.

    David M Schulte

    Full Text Available Surveys of restored oyster reefs need to produce accurate population estimates to assess the efficacy of restoration. Due to the complex structure of subtidal oyster reefs, one effective and efficient means to sample is by patent tongs, rather than SCUBA, dredges, or bottom cores. Restored reefs vary in relief and oyster density, either of which could affect survey efficiency. This study is the first to evaluate gear (the first full grab and survey (which includes selecting a specific half portion of the first grab for further processing efficiencies of hand-operated patent tongs as a function of reef height and oyster density on subtidal restoration reefs. In the Great Wicomico River, a tributary of lower Chesapeake Bay, restored reefs of high- and low-relief (25-45 cm, and 8-12 cm, respectively were constructed throughout the river as the first large-scale oyster sanctuary reef restoration effort (sanctuary acreage > 20 ha at one site in Chesapeake Bay. We designed a metal frame to guide a non-hydraulic mechanical patent tong repeatedly into the same plot on a restored reef until all oysters within the grab area were captured. Full capture was verified by an underwater remotely-operated vehicle. Samples (n = 19 were taken on nine different reefs, including five low- (n = 8 and four high-relief reefs (n = 11, over a two-year period. The gear efficiency of the patent tong was estimated to be 76% (± 5% standard error, whereas survey efficiency increased to 81% (± 10% due to processing. Neither efficiency differed significantly between young-of-the-year oysters (spat and adults, high- and low-relief reefs, or years. As this type of patent tong is a common and cost-effective tool to evaluate oyster restoration projects as well as population density on fished habitat, knowing the gear and survey efficiencies allows for accurate and precise population estimates.

  2. Gear and survey efficiency of patent tongs for oyster populations on restoration reefs.

    Schulte, David M; Lipcius, Romuald N; Burke, Russell P

    2018-01-01

    Surveys of restored oyster reefs need to produce accurate population estimates to assess the efficacy of restoration. Due to the complex structure of subtidal oyster reefs, one effective and efficient means to sample is by patent tongs, rather than SCUBA, dredges, or bottom cores. Restored reefs vary in relief and oyster density, either of which could affect survey efficiency. This study is the first to evaluate gear (the first full grab) and survey (which includes selecting a specific half portion of the first grab for further processing) efficiencies of hand-operated patent tongs as a function of reef height and oyster density on subtidal restoration reefs. In the Great Wicomico River, a tributary of lower Chesapeake Bay, restored reefs of high- and low-relief (25-45 cm, and 8-12 cm, respectively) were constructed throughout the river as the first large-scale oyster sanctuary reef restoration effort (sanctuary acreage > 20 ha at one site) in Chesapeake Bay. We designed a metal frame to guide a non-hydraulic mechanical patent tong repeatedly into the same plot on a restored reef until all oysters within the grab area were captured. Full capture was verified by an underwater remotely-operated vehicle. Samples (n = 19) were taken on nine different reefs, including five low- (n = 8) and four high-relief reefs (n = 11), over a two-year period. The gear efficiency of the patent tong was estimated to be 76% (± 5% standard error), whereas survey efficiency increased to 81% (± 10%) due to processing. Neither efficiency differed significantly between young-of-the-year oysters (spat) and adults, high- and low-relief reefs, or years. As this type of patent tong is a common and cost-effective tool to evaluate oyster restoration projects as well as population density on fished habitat, knowing the gear and survey efficiencies allows for accurate and precise population estimates.

  3. Flow-sediment-oyster interaction around degraded, restored, and reference oyster reefs in Florida's Indian River Lagoon

    Kitsikoudis, V.; Kibler, K. M.; Spiering, D. W.

    2017-12-01

    This study analyzes flow patterns and sediment distributions around three oyster reefs in a bar-built estuarine lagoon. We studied a degraded reef, a recently restored reef, and a reference condition reef with a healthy live oyster community. The restored reef had been regraded and restored with oyster shell mats to aid in recruitment of oyster spat, with the goal of reestablishing a healthy oyster community. Despite the fact that flow-biota-sediment interaction constitutes a blossoming research field, actual field data are sparse and current knowledge emanates from flume studies and numerical modeling. Moreover, the hydraulic effect of restored oyster reefs has not been thoroughly investigated and it is not clear if the flow field and sediment erosion/deposition are similar or diverge from natural reefs. Instantaneous three-dimensional flow velocities were collected on reefs using a Nortek Vectrino Profiler and an acoustic Doppler current profiler (Nortek Aquadopp). The former measured a 2 - 3 cm velocity profile above the oyster bed, while the latter quantified incoming velocities across the flow profile approximately 10 m from the edge of the reef. Flow measurements were conducted during rising tides and are coupled with simultaneous wind speed and direction data. In addition, 20 cm deep sediment cores were retrieved on and off the investigated reefs. Sediment grain size distributions were determined after individual cores were processed for loss on ignition. Incoming flow velocities were as high as 10 cm/s, relatively higher than those recorded close to reefs. Mean and turbulent flow velocities close to the reefs, varied among the investigated sites, despite the similar wind flow conditions offshore. For instance, the measurements at the degraded reef showed decreased wave attenuation and augmented flow velocities compared to the other sites. Boat wakes exhibited a very distinct signal in the flow velocity time-series and significantly increased the approaching

  4. Temporal variation in development of ecosystem services from oyster reef restoration

    LaPeyre, Megan K.; Humphries, Austin T.; Casas, Sandra M.; La Peyre, Jerome F.

    2014-01-01

    Restoration ecology relies heavily on ecosystem development theories that generally assume development of fully functioning natural systems over time, but often fail to identify the time-frame required for provision of desired functions, or acknowledge different pathways of functional development. In estuaries, a decline of overall habitat quality and functioning has led to significant efforts to restore critical ecosystem services, recently through the creation and restoration of oyster reefs. Oyster reef restoration generally occurs with goals of (1) increasing water quality via filtration through sustainable oyster recruitment, (2) stabilizing shorelines, and (3) creating and enhancing critical estuarine habitat for fish and invertebrates. We restored over 260 m2 of oyster reef habitat in coastal Louisiana and followed the development and provision of these ecosystem services from 2009 through 2012. Oysters recruited to reefs immediately, with densities of oysters greater than 75 mm exceeding 80 ind m−2 after 3 years, and provision of filtration rates of 1002 ± 187 L h−1 m−2; shoreline stabilization effects of the created reefs were minimal over the three years of monitoring, with some evidence of positive shoreline stabilization during higher wind/energy events only; increased nekton abundance of resident, but not larger transient fish was immediately measurable at the reefs, however, this failed to increase through time. Our results provide critical insights into the development trajectories of ecosystem services provided by restored oyster reefs, as well as the mechanisms mediating these changes. This is critical both ecologically to understand how and where a reef thrives, and for policy and management to guide decision-making related to oyster reef restoration and the crediting and accounting of ecosystem services.

  5. Oyster reef restoration supports increased nekton biomass and potential commercial fishery value

    Austin T. Humphries

    2015-08-01

    Full Text Available Across the globe, discussions centered on the value of nature drive many conservation and restoration decisions. As a result, justification for management activities increasingly asks for two lines of evidence: (1 biological proof of augmented ecosystem function or service, and (2 monetary valuation of these services. For oyster reefs, which have seen significant global declines and increasing restoration work, the need to provide both biological and monetary evidence of reef services on a local-level has become more critical in a time of declining resources. Here, we quantified species biomass and potential commercial value of nekton collected from restored oyster (Crassostrea virginica reefs in coastal Louisiana over a 3-year period, providing multiple snapshots of biomass support over time. Overall, and with little change over time, fish and invertebrate biomass is 212% greater at restored oyster reefs than mud-bottom, or 0.12 kg m−2. The additional biomass of commercial species is equivalent to an increase of local fisheries value by 226%, or $0.09 m−2. Understanding the ecosystem value of restoration projects, and how they interact with regional management priorities, is critical to inform local decision-making and provide testable predictions. Quantitative estimates of potential commercial fisheries enhancement by oyster reef restoration such as this one can be used directly by local managers to determine the expected return on investment.

  6. Restoration of oyster reefs in an estuarine lake: population dynamics and shell accretion

    Casas, Sandra M.; La Peyre, Jerome F.; La Peyre, Megan K.

    2015-01-01

    Restoration activities inherently depend on understanding the spatial and temporal variation in basic demographic rates of the species of interest. For species that modify and maintain their own habitat such as the eastern oyster Crassostrea virginica, understanding demographic rates and their impacts on population and habitat success are crucial to ensuring restoration success. We measured oyster recruitment, density, size distribution, biomass, mortality and Perkinsus marinus infection intensity quarterly for 3 yr on shallow intertidal reefs created with shell cultch in March 2009. All reefs were located within Sister Lake, LA. Reefs were placed in pairs at 3 different locations within the lake; pairs were placed in low and medium energy sites within each location. Restored reefs placed within close proximity (biomass (>14.6 kg m-2) at the end of 3 yr. Shell accretion, on average, exceeded estimated rates required to keep pace with local subsidence and shell loss. Variation in recruitment, growth and survival drives local site-specific population success, which highlights the need to understand local water quality, hydrodynamics, and metapopulation dynamics when planning restoration.

  7. Oysters and Oyster Reef Communities in Florida.

    Knight, Jean; Bly, Joe

    1989-01-01

    The habitat, life history, feeding, classification, anatomy and pearl production of the American oyster (Crassostrea virginica) are presented. A list of other oyster reef inhabitants and predators is provided. Harvest and habitat loss are discussed. (CW)

  8. UF's Lone Cabbage Oyster Reef Restoration Project: a use case in implementing a data management plan (DMP)

    Aufmuth, Joe

    2018-01-01

    Data management plans are created to satisfy funding agency proposal requirements related to the data life cycle. Once an award is made researchers must implement the plan they described. But how is this best accomplished? The presentation UF’s Lone Cabbage Oyster Reef Restoration Project: a use case in implementing a data management plan (DMP) describes how PI's for this grant funded research project are achieving its data management plan goals using an academic library's consulting team.

  9. Distribution of Georgia Oyster Reefs

    National Oceanic and Atmospheric Administration, Department of Commerce — The feature class in this ESRI Geodatabase contains polygons representing oyster reefs along the Georgia coastal waterways from Chatham County south to Glynn County....

  10. Economic Values Associated With Construction of Oyster Reefs by the Corps of Engineers

    Henderson, Jim

    2003-01-01

    .... That template includes a community model for the American oyster (Crassostrea virginica) which can be used to quantify the ecological benefits of an oyster reef in an ecosystem restoration project...

  11. Oyster reef restoration in controlling coastal pollution around India: A viewpoint

    Chakraborty, P.

    .G., Pirie, B.J.S., Cheyne, A.R., Coombs, T.L. and Grant, P.T., 1978. Detoxication of metals by marine bivalves: an ultrastructural study of the compartmentation of copper and zinc in the oyster Ostreaedulis. Marine Biology, 45(2), pp.147-156. Gupta, R...

  12. Mapping Oyster Reef Habitats in Mobile Bay

    Bolte, Danielle

    2011-01-01

    Oyster reefs around the world are declining rapidly, and although they haven t received as much attention as coral reefs, they are just as important to their local ecosystems and economies. Oyster reefs provide habitats for many species of fish, invertebrates, and crustaceans, as well as the next generations of oysters. Oysters are also harvested from many of these reefs and are an important segment of many local economies, including that of Mobile Bay, where oysters rank in the top five commercial marine species both by landed weight and by dollar value. Although the remaining Mobile Bay oyster reefs are some of the least degraded in the world, projected climate change could have dramatic effects on the health of these important ecosystems. The viability of oyster reefs depends on water depth and temperature, appropriate pH and salinity levels, and the amount of dissolved oxygen in the water. Projected increases in sea level, changes in precipitation and runoff patterns, and changes in pH resulting from increases in the amount of carbon dioxide dissolved in the oceans could all affect the viability of oyster reefs in the future. Human activities such as dredging and unsustainable harvesting practices are also adversely impacting the oyster reefs. Fortunately, several projects are already under way to help rebuild or support existing or previously existing oyster reefs. The success of these projects will depend on the local effects of climate change on the current and potential habitats and man s ability to recognize and halt unsustainable harvesting practices. As the extent and health of the reefs changes, it will have impacts on the Mobile Bay ecosystem and economy, changing the resources available to the people who live there and to the rest of the country, since Mobile Bay is an important national source of seafood. This project identified potential climate change impacts on the oyster reefs of Mobile Bay, including the possible addition of newly viable

  13. Hyperspectral remote sensing of wild oyster reefs

    Le Bris, Anthony; Rosa, Philippe; Lerouxel, Astrid; Cognie, Bruno; Gernez, Pierre; Launeau, Patrick; Robin, Marc; Barillé, Laurent

    2016-04-01

    The invasion of the wild oyster Crassostrea gigas along the western European Atlantic coast has generated changes in the structure and functioning of intertidal ecosystems. Considered as an invasive species and a trophic competitor of the cultivated conspecific oyster, it is now seen as a resource by oyster farmers following recurrent mass summer mortalities of oyster spat since 2008. Spatial distribution maps of wild oyster reefs are required by local authorities to help define management strategies. In this work, visible-near infrared (VNIR) hyperspectral and multispectral remote sensing was investigated to map two contrasted intertidal reef structures: clusters of vertical oysters building three-dimensional dense reefs in muddy areas and oysters growing horizontally creating large flat reefs in rocky areas. A spectral library, collected in situ for various conditions with an ASD spectroradiometer, was used to run Spectral Angle Mapper classifications on airborne data obtained with an HySpex sensor (160 spectral bands) and SPOT satellite HRG multispectral data (3 spectral bands). With HySpex spectral/spatial resolution, horizontal oysters in the rocky area were correctly classified but the detection was less efficient for vertical oysters in muddy areas. Poor results were obtained with the multispectral image and from spatially or spectrally degraded HySpex data, it was clear that the spectral resolution was more important than the spatial resolution. In fact, there was a systematic mud deposition on shells of vertical oyster reefs explaining the misclassification of 30% of pixels recognized as mud or microphytobenthos. Spatial distribution maps of oyster reefs were coupled with in situ biomass measurements to illustrate the interest of a remote sensing product to provide stock estimations of wild oyster reefs to be exploited by oyster producers. This work highlights the interest of developing remote sensing techniques for aquaculture applications in coastal

  14. Oyster Reef Projects 1997-2001

    National Oceanic and Atmospheric Administration, Department of Commerce — We used a quantitative sampling device to compare nekton use among high-relief live oyster reef, vegetated marsh edge Spartina alterniflora, and nonvegetated bottom...

  15. Oyster Reef Communities in the Chesapeake Bay: A Brief Primer. VORTEX: Virginia's Oyster Reef Teaching EXperience.

    Harding, Juliana M.; Mann, Roger; Clark, Vicki P.

    This document introduces Virginia's Oyster Reef Teaching EXperience (VORTEX), which is an interdisciplinary program focusing on the importance of oyster reef communities in the Chesapeake Bay ecosystem. The VORTEX program uses field and laboratory experience supported by multimedia instruction. This document presents an overview on the biology of…

  16. Quantitative validation of a habitat suitability index for oyster restoration

    Seth eTheuerkauf

    2016-05-01

    Full Text Available Habitat suitability index (HSI models provide spatially explicit information on the capacity of a given habitat to support a species of interest, and their prevalence has increased dramatically in recent years. Despite caution that the reliability of HSIs must be validated using independent, quantitative data, most HSIs intended to inform terrestrial and marine species management remain unvalidated. Furthermore, of the eight HSI models developed for eastern oyster (Crassostrea virginica restoration and fishery production, none has been validated. Consequently, we developed, calibrated, and validated an HSI for the eastern oyster to identify optimal habitat for restoration in a tributary of Chesapeake Bay, the Great Wicomico River (GWR. The GWR harbors a high density, restored oyster population, and therefore serves as an excellent model system for assessing the validity of the HSI. The HSI was derived from GIS layers of bottom type, salinity, and water depth (surrogate for dissolved oxygen, and was tested using live adult oyster density data from a survey of high vertical relief reefs (HRR and low vertical relief reefs (LRR in the sanctuary network. Live adult oyster density was a statistically-significant sigmoid function of the HSI, which validates the HSI as a robust predictor of suitable oyster reef habitat for rehabilitation or restoration. In addition, HRR had on average 103-116 more adults m^−2 than LRR at a given level of the HSI. For HRR, HSI values ≥0.3 exceeded the accepted restoration target of 50 live adult oysters m^−2. For LRR, the HSI was generally able to predict live adult oyster densities that meet or exceed the target at HSI values ≥0.3. The HSI indicated that there remain large areas of suitable habitat for restoration in the GWR. This study provides a robust framework for HSI model development and validation, which can be refined and applied to other systems and previously developed HSIs to improve the efficacy of

  17. Overcoming restoration paradigms: value of the historical record and metapopulation dynamics in native oyster restoration

    Romuald N. Lipcius

    2015-09-01

    Full Text Available Restoration strategies for native oyster populations rely on multiple sources of information, which often conflict due to time- and space-varying patterns in abundance and distribution. For instance, strategies based on population connectivity and disease resistance can differ, and extant and historical records of abundance and distribution are often at odds, such that the optimal strategy is unclear and valuable restoration sites may be excluded from consideration. This was the case for the Lynnhaven River subestuary of lower Chesapeake Bay, which was deemed unsuitable for Eastern Oyster restoration based on physical conditions, disease challenge, and extant oyster abundance. Consequently, we (i evaluated previously unknown historical data from the 1800s, (ii quantified extant oyster recruitment and abundance, physical conditions, and disease presence on constructed restoration reefs and alternative substrates, and (iii assessed simulations from biophysical models to identify potential restoration sites in the metapopulation. The collective data distinguished numerous restoration sites (i in the polyhaline zone (salinity 18.4-22.2 where disease resistance is evolving, (ii where oysters were abundant in the late 1800s-early 1900s, (iii of recent high recruitment, abundance and survival, despite consistent and elevated disease challenge, and (iv interconnected as a metapopulation via larval dispersal. Moreover, a network of constructed restoration reefs met size structure, abundance and biomass standards of restoration success. These findings demonstrate that assumptions about the suitability of sites for oyster restoration based on individual processes can be severely flawed, and that in-depth examination of multiple processes and sources of information are required for oyster reef restoration plans to maximize success. We use these findings and previous information to recommend a strategy for successful restoration of subtidal oyster reefs

  18. Guidelines for evaluating performance of oyster habitat restoration

    Baggett, Lesley P.; Powers, Sean P.; Brumbaugh, Robert D.; Coen, Loren D.; DeAngelis, Bryan M.; Greene, Jennifer K.; Hancock, Boze T.; Morlock, Summer M.; Allen, Brian L.; Breitburg, Denise L.; Bushek, David; Grabowski, Jonathan H.; Grizzle, Raymond E.; Grosholz, Edwin D.; LaPeyre, Megan K.; Luckenbach, Mark W.; McGraw, Kay A.; Piehler, Michael F.; Westby, Stephanie R.; zu Ermgassen, Philine S. E.

    2015-01-01

    Restoration of degraded ecosystems is an important societal goal, yet inadequate monitoring and the absence of clear performance metrics are common criticisms of many habitat restoration projects. Funding limitations can prevent adequate monitoring, but we suggest that the lack of accepted metrics to address the diversity of restoration objectives also presents a serious challenge to the monitoring of restoration projects. A working group with experience in designing and monitoring oyster reef projects was used to develop standardized monitoring metrics, units, and performance criteria that would allow for comparison among restoration sites and projects of various construction types. A set of four universal metrics (reef areal dimensions, reef height, oyster density, and oyster size–frequency distribution) and a set of three universal environmental variables (water temperature, salinity, and dissolved oxygen) are recommended to be monitored for all oyster habitat restoration projects regardless of their goal(s). In addition, restoration goal-based metrics specific to four commonly cited ecosystem service-based restoration goals are recommended, along with an optional set of seven supplemental ancillary metrics that could provide information useful to the interpretation of prerestoration and postrestoration monitoring data. Widespread adoption of a common set of metrics with standardized techniques and units to assess well-defined goals not only allows practitioners to gauge the performance of their own projects but also allows for comparison among projects, which is both essential to the advancement of the field of oyster restoration and can provide new knowledge about the structure and ecological function of oyster reef ecosystems.

  19. A Restoration Suitability Index Model for the Eastern Oyster (Crassostrea virginica) in the Mission-Aransas Estuary, TX, USA

    Beseres Pollack, Jennifer; Cleveland, Andrew; Palmer, Terence A.; Reisinger, Anthony S.; Montagna, Paul A.

    2012-01-01

    Oyster reefs are one of the most threatened marine habitats on earth, with habitat loss resulting from water quality degradation, coastal development, destructive fishing practices, overfishing, and storm impacts. For successful and sustainable oyster reef restoration efforts, it is necessary to choose sites that support long-term growth and survival of oysters. Selection of suitable sites is critically important as it can greatly influence mortality factors and may largely determine the ultimate success of the restoration project. The application of Geographic Information Systems (GIS) provides an effective methodology for identifying suitable sites for oyster reef restoration and removes much of the uncertainty involved in the sometimes trial and error selection process. This approach also provides an objective and quantitative tool for planning future oyster reef restoration efforts. The aim of this study was to develop a restoration suitability index model and reef quality index model to characterize locations based on their potential for successful reef restoration within the Mission-Aransas Estuary, Texas, USA. The restoration suitability index model focuses on salinity, temperature, turbidity, dissolved oxygen, and depth, while the reef quality index model focuses on abundance of live oysters, dead shell, and spat. Size-specific Perkinsus marinus infection levels were mapped to illustrate general disease trends. This application was effective in identifying suitable sites for oyster reef restoration, is flexible in its use, and provides a mechanism for considering alternative approaches. The end product is a practical decision-support tool that can be used by coastal resource managers to improve oyster restoration efforts. As oyster reef restoration activities continue at small and large-scales, site selection criteria are critical for assisting stakeholders and managers and for maximizing long-term sustainability of oyster resources. PMID:22792410

  20. Shell Games. VORTEX: Virginia's Oyster Reef Teaching EXperience.

    Harding, Juliana M.; Mann, Roger; Clark, Vicki P.

    This document introduces Virginia's Oyster Reef Teaching EXperience (VORTEX), which is an interdisciplinary program focusing on the importance of oyster reef communities in the Chesapeake Bay ecosystem. The VORTEX program uses field and laboratory experiences supported by multimedia instruction. This document presents an overview on the biology of…

  1. Drought Increases Consumer Pressure on Oyster Reefs in Florida, USA.

    Hanna G Garland

    Full Text Available Coastal economies and ecosystems have historically depended on oyster reefs, but this habitat has declined globally by 85% because of anthropogenic activities. In a Florida estuary, we investigated the cause of newly reported losses of oysters. We found that the oyster reefs have deteriorated from north to south and that this deterioration was positively correlated with the abundance of carnivorous conchs and water salinity. In experiments across these gradients, oysters survived regardless of salinity if conchs were excluded. After determining that conchs were the proximal cause of oyster loss, we tested whether elevated water salinity was linked to conch abundance either by increasing conch growth and survivorship or by decreasing the abundance of a predator of conchs. In field experiments across a salinity gradient, we failed to detect spatial variation in predation on conchs or in conch growth and survivorship. A laboratory experiment, however, demonstrated the role of salinity by showing that conch larvae failed to survive at low salinities. Because this estuary's salinity increased in 2006 in response to reduced inputs of freshwater, we concluded that the ultimate cause of oyster decline was an increase in salinity. According to records from 2002 to 2012, oyster harvests have remained steady in the northernmost estuaries of this ecoregion (characterized by high reef biomass, low salinity, and low conch abundance but have declined in the southernmost estuaries (characterized by lower reef biomass, increases in salinity, and increases in conch abundance. Oyster conservation in this ecoregion, which is probably one of the few that still support viable oyster populations, may be undermined by drought-induced increases in salinity causing an increased abundance of carnivorous conchs.

  2. Drought Increases Consumer Pressure on Oyster Reefs in Florida, USA.

    Garland, Hanna G; Kimbro, David L

    2015-01-01

    Coastal economies and ecosystems have historically depended on oyster reefs, but this habitat has declined globally by 85% because of anthropogenic activities. In a Florida estuary, we investigated the cause of newly reported losses of oysters. We found that the oyster reefs have deteriorated from north to south and that this deterioration was positively correlated with the abundance of carnivorous conchs and water salinity. In experiments across these gradients, oysters survived regardless of salinity if conchs were excluded. After determining that conchs were the proximal cause of oyster loss, we tested whether elevated water salinity was linked to conch abundance either by increasing conch growth and survivorship or by decreasing the abundance of a predator of conchs. In field experiments across a salinity gradient, we failed to detect spatial variation in predation on conchs or in conch growth and survivorship. A laboratory experiment, however, demonstrated the role of salinity by showing that conch larvae failed to survive at low salinities. Because this estuary's salinity increased in 2006 in response to reduced inputs of freshwater, we concluded that the ultimate cause of oyster decline was an increase in salinity. According to records from 2002 to 2012, oyster harvests have remained steady in the northernmost estuaries of this ecoregion (characterized by high reef biomass, low salinity, and low conch abundance) but have declined in the southernmost estuaries (characterized by lower reef biomass, increases in salinity, and increases in conch abundance). Oyster conservation in this ecoregion, which is probably one of the few that still support viable oyster populations, may be undermined by drought-induced increases in salinity causing an increased abundance of carnivorous conchs.

  3. Integrating Larval Dispersal, Permitting, and Logistical Factors Within a Validated Habitat Suitability Index for Oyster Restoration

    Brandon J. Puckett

    2018-04-01

    Full Text Available Habitat suitability index (HSI models are increasingly used to guide ecological restoration. Successful restoration is a byproduct of several factors, including physical and biological processes, as well as permitting and logistical considerations. Rarely are factors from all of these categories included in HSI models, despite their combined relevance to common restoration goals such as population persistence. We developed a Geographic Information System (GIS-based HSI for restoring persistent high-relief subtidal oyster (Crassostrea virginica reefs protected from harvest (i.e., sanctuaries in Pamlico Sound, North Carolina, USA. Expert stakeholder input identified 17 factors to include in the HSI. Factors primarily represented physical (e.g., salinity and biological (e.g., larval dispersal processes relevant to oyster restoration, but also included several relevant permitting (e.g., presence of seagrasses and logistical (e.g., distance to restoration material stockpile sites considerations. We validated the model with multiple years of oyster density data from existing sanctuaries, and compared HSI output with distributions of oyster reefs from the late 1800's. Of the 17 factors included in the model, stakeholders identified four factors—salinity, larval export from existing oyster sanctuaries, larval import to existing sanctuaries, and dissolved oxygen—most critical to oyster sanctuary site selection. The HSI model provided a quantitative scale over which a vast water body (~6,000 km2 was narrowed down by 95% to a much smaller suite of optimal (top 1% HSI and suitable (top 5% HSI locations for oyster restoration. Optimal and suitable restoration locations were clustered in northeast and southwest Pamlico Sound. Oyster density in existing sanctuaries, normalized for time since reef restoration, was a positive exponential function of HSI, providing validation for the model. Only a small portion (10–20% of historical reef locations

  4. Evidence of exceptional oyster-reef resilience to fluctuations in sea level.

    Ridge, Justin T; Rodriguez, Antonio B; Fodrie, F Joel

    2017-12-01

    Ecosystems at the land-sea interface are vulnerable to rising sea level. Intertidal habitats must maintain their surface elevations with respect to sea level to persist via vertical growth or landward retreat, but projected rates of sea-level rise may exceed the accretion rates of many biogenic habitats. While considerable attention is focused on climate change over centennial timescales, relative sea level also fluctuates dramatically (10-30 cm) over month-to-year timescales due to interacting oceanic and atmospheric processes. To assess the response of oyster-reef ( Crassostrea virginica ) growth to interannual variations in mean sea level (MSL) and improve long-term forecasts of reef response to rising seas, we monitored the morphology of constructed and natural intertidal reefs over 5 years using terrestrial lidar. Timing of reef scans created distinct periods of high and low relative water level for decade-old reefs ( n  = 3) constructed in 1997 and 2000, young reefs ( n  = 11) constructed in 2011 and one natural reef (approximately 100 years old). Changes in surface elevation were related to MSL trends. Decade-old reefs achieved 2 cm/year growth, which occurred along higher elevations when MSL increased. Young reefs experienced peak growth (6.7 cm/year) at a lower elevation that coincided with a drop in MSL. The natural reef exhibited considerable loss during the low MSL of the first time step but grew substantially during higher MSL through the second time step, with growth peaking (4.3 cm/year) at MSL, reoccupying the elevations previously lost. Oyster reefs appear to be in dynamic equilibrium with short-term (month-to-year) fluctuations in sea level, evidencing notable resilience to future changes to sea level that surpasses other coastal biogenic habitat types. These growth patterns support the presence of a previously defined optimal growth zone that shifts correspondingly with changes in MSL, which can help guide oyster-reef conservation and

  5. Optimal Site Characterization and Selection Criteria for Oyster Restoration using Multicolinear Factorial Water Quality Approach

    Yoon, J.

    2015-12-01

    Elevated levels of nutrient loadings have enriched the Chesapeake Bay estuaries and coastal waters via point and nonpoint sources and the atmosphere. Restoring oyster beds is considered a Best Management Practice (BMP) to improve the water quality as well as provide physical aquatic habitat and a healthier estuarine system. Efforts include declaring sanctuaries for brood-stocks, supplementing hard substrate on the bottom and aiding natural populations with the addition of hatchery-reared and disease-resistant stocks. An economic assessment suggests that restoring the ecological functions will improve water quality, stabilize shorelines, and establish a habitat for breeding grounds that outweighs the value of harvestable oyster production. Parametric factorial models were developed to investigate multicolinearities among in situ water quality and oyster restoration activities to evaluate posterior success rates upon multiple substrates, and physical, chemical, hydrological and biological site characteristics to systematically identify significant factors. Findings were then further utilized to identify the optimal sites for successful oyster restoration augmentable with Total Maximum Daily Loads (TMDLs) and BMPs. Factorial models evaluate the relationship among the dependent variable, oyster biomass, and treatments of temperature, salinity, total suspended solids, E. coli/Enterococci counts, depth, dissolved oxygen, chlorophyll a, nitrogen and phosphorus, and blocks consist of alternative substrates (oyster shells versus riprap, granite, cement, cinder blocks, limestone marl or combinations). Factorial model results were then compared to identify which combination of variables produces the highest posterior biomass of oysters. Developed Factorial model can facilitate maximizing the likelihood of successful oyster reef restoration in an effort to establish a healthier ecosystem and to improve overall estuarine water quality in the Chesapeake Bay estuaries.

  6. Photosynthetic epibionts and endobionts of Pacific oyster shells from oyster reefs in rocky versus mudflat shores.

    Laurent Barillé

    Full Text Available The Pacific oyster, Crassostrea gigas (Thunberg, is the main bivalve species cultivated in the world. With global warming enabling its reproduction and larval survival at higher latitudes, this species is now recognized as invasive and creates wild oyster reefs globally. In this study, the spatial distribution of photosynthetic assemblages colonizing the shells of wild C. gigas was investigated on both a large scale (two contrasting types of reefs found in mudflats and rocky areas and a small scale (within individual shells using a hyperspectral imager. The microspatial distribution of all phototrophs was obtained by mapping the Normalized Difference Vegetation Index (NDVI. Second derivative (δδ analyses of hyperspectral images at 462, 524, 571 and 647 nm were subsequently applied to map diatoms, cyanobacteria, rhodophytes and chlorophytes, respectively. A concomitant pigment analysis was carried out by high performance liquid chromatography and completed by taxonomic observations. This study showed that there was high microalgal diversity associated with wild oyster shells and that there were differences in the structure of the phototropic assemblages depending on the type of reef. Namely, vertically-growing oysters in mudflat areas had a higher biomass of epizoic diatoms (hyperspectral proxy at δδ462 nm and were mainly colonized by species of the genera Navicula, Nitzschia and Hippodonta, which are epipelic or motile epipsammic. The assemblages on the horizontal oysters contained more tychoplanktonic diatoms (e.g. Thalassiosira pseudonana, T. proschkinae and Plagiogrammopsis vanheurckii. Three species of boring cyanobacteria were observed for both types of reef: Mastigocoleus testarum, Leptolyngbya terrebrans, and Hyella caespistosa, but the second derivative analysis at 524 nm showed a significantly higher biomass for the horizontally-growing oysters. There was no biomass difference for the boring chlorophyte assemblages (δδ647 nm, with

  7. Baseline data for evaluating development trajectory and provision of ecosystem services of created fringing oyster reefs in Vermilion Bay, Louisiana

    La Peyre, Megan K.; Schwarting, Lindsay; Miller, Shea

    2013-01-01

    Understanding the time frame in which ecosystem services (that is, water quality maintenance, shoreline protection, habitat provision) are expected to be provided is important when restoration projects are being designed and implemented. Restoration of three-dimensional shell habitats in coastal Louisiana and elsewhere presents a valuable and potentially self-sustaining approach to providing shoreline protection, enhancing nekton habitat, and providing water quality maintenance. As with most restoration projects, the development of expected different ecosystem services often occurs over varying time frames, with some services provided immediately and others taking longer to develop. This project was designed initially to compare the provision and development of ecosystem services by created fringing shoreline reefs in subtidal and intertidal environments in Vermilion Bay, Louisiana. Specifically, the goal was to test the null hypothesis that over time, the oyster recruitment and development of a sustainable oyster reef community would be similar at both intertidal and subtidal reef bases, and these sustainable reefs would in time provide similar shoreline stabilization, nekton habitat, and water quality services over similar time frames. Because the ecosystem services hypothesized to be provided by oyster reefs reflect long-term processes, fully testing the above-stated null hypothesis requires a longer-time frame than this project allowed. As such, this project was designed to provide the initial data on reef development and provision of ecosystem services, to identify services that may develop immediately, and to provide baseline data to allow for longer-term follow up studies tracking reef development over time. Unfortunately, these initially created reef bases (subtidal, intertidal) were not constructed as planned because of the Deepwater Horizon oil spill in April 2010, which resulted in reef duplicates being created 6 months apart. Further confounding the

  8. Artificial reefs and reef restoration in the Laurentian Great Lakes

    McLean, Matthew W.; Roseman, Edward; Pritt, Jeremy J.; Kennedy, Gregory W.; Manny, Bruce A.

    2015-01-01

    We reviewed the published literature to provide an inventory of Laurentian Great Lakes artificial reef projects and their purposes. We also sought to characterize physical and biological monitoring for artificial reef projects in the Great Lakes and determine the success of artificial reefs in meeting project objectives. We found records of 6 artificial reefs in Lake Erie, 8 in Lake Michigan, 3 in Lakes Huron and Ontario, and 2 in Lake Superior. We found 9 reefs in Great Lakes connecting channels and 6 reefs in Great Lakes tributaries. Objectives of artificial reef creation have included reducing impacts of currents and waves, providing safe harbors, improving sport-fishing opportunities, and enhancing/restoring fish spawning habitats. Most reefs in the lakes themselves were incidental (not created purposely for fish habitat) or built to improve local sport fishing, whereas reefs in tributaries and connecting channels were more frequently built to benefit fish spawning. Levels of assessment of reef performance varied; but long-term monitoring was uncommon as was assessment of physical attributes. Artificial reefs were often successful at attracting recreational species and spawning fish; however, population-level benefits of artificial reefs are unclear. Stressors such as sedimentation and bio-fouling can limit the effectiveness of artificial reefs as spawning enhancement tools. Our investigation underscores the need to develop standard protocols for monitoring the biological and physical attributes of artificial structures. Further, long-term monitoring is needed to assess the benefits of artificial reefs to fish populations and inform future artificial reef projects.

  9. Shellfish reef restoration pilots: Voordelta The Netherlands

    Sas, H.; Kamermans, P.; Have, van der T.M.; Lengkeek, W.; Smaal, A.C.

    2016-01-01

    Once, shellfish reefs - mainly flat oysters - covered about 20% of the North Sea floor, but diseases, pollution and overfishing have led to a significant decline. As part of the Haringvliet Dream Fund Project (www.haringvliet.nu), ARK
    Nature and World Wildlife Fund Netherlands are working on

  10. Biomarkers of dissolved oxygen stress in oysters: a tool for restoration and management efforts.

    Patterson, Heather K; Boettcher, Anne; Carmichael, Ruth H

    2014-01-01

    The frequency and intensity of anoxic and hypoxic events are increasing worldwide, creating stress on the organisms that inhabit affected waters. To understand the effects of low dissolved oxygen stress on oysters, hatchery-reared oysters were placed in cages and deployed along with continuously recording environmental data sondes at a reef site in Mobile Bay, AL that typically experiences low oxygen conditions. To detect and measure sublethal stress, we measured growth and survival of oysters as well as expression of three biomarkers, heat shock protein 70 (HSP70), hypoxia inducible factor (HIF) and phospho-p38 MAP kinase, in tissues from juvenile and adult oysters. Survival rates were high for both juvenile and adult oysters. Expression levels of each of the 3 isoforms of HSP 70 were negatively correlated to dissolved oxygen (DO) concentrations, suggesting that HSP 70 is useful to quantify sublethal effects of DO stress. Results for HIF and phospho-p38 MAP kinase were inconclusive. Test deployments of oysters to assess expression of HSP 70 relative to environmental conditions will be useful, in addition to measuring abiotic factors, to identify appropriate sites for restoration, particularly to capture negative effects of habitat quality on biota before lethal impacts are incurred.

  11. Satellite remote sensing reveals a positive impact of living oyster reefs on microalgal biofilm development

    C. Echappé

    2018-02-01

    Full Text Available Satellite remote sensing (RS is routinely used for the large-scale monitoring of microphytobenthos (MPB biomass in intertidal mudflats and has greatly improved our knowledge of MPB spatio-temporal variability and its potential drivers. Processes operating on smaller scales however, such as the impact of benthic macrofauna on MPB development, to date remain underinvestigated. In this study, we analysed the influence of wild Crassostrea gigas oyster reefs on MPB biofilm development using multispectral RS. A 30-year time series (1985–2015 combining high-resolution (30 m Landsat and SPOT data was built in order to explore the relationship between C. gigas reefs and MPB spatial distribution and seasonal dynamics, using the normalized difference vegetation index (NDVI. Emphasis was placed on the analysis of a before–after control-impact (BACI experiment designed to assess the effect of oyster killing on the surrounding MPB biofilms. Our RS data reveal that the presence of oyster reefs positively affects MPB biofilm development. Analysis of the historical time series first showed the presence of persistent, highly concentrated MPB patches around oyster reefs. This observation was supported by the BACI experiment which showed that killing the oysters (while leaving the physical reef structure, i.e. oyster shells, intact negatively affected both MPB biofilm biomass and spatial stability around the reef. As such, our results are consistent with the hypothesis of nutrient input as an explanation for the MPB growth-promoting effect of oysters, whereby organic and inorganic matter released through oyster excretion and biodeposition stimulates MPB biomass accumulation. MPB also showed marked seasonal variations in biomass and patch shape, size and degree of aggregation around the oyster reefs. Seasonal variations in biomass, with higher NDVI during spring and autumn, were consistent with those observed on broader scales in other European mudflats. Our

  12. Satellite remote sensing reveals a positive impact of living oyster reefs on microalgal biofilm development

    Echappé, Caroline; Gernez, Pierre; Méléder, Vona; Jesus, Bruno; Cognie, Bruno; Decottignies, Priscilla; Sabbe, Koen; Barillé, Laurent

    2018-02-01

    Satellite remote sensing (RS) is routinely used for the large-scale monitoring of microphytobenthos (MPB) biomass in intertidal mudflats and has greatly improved our knowledge of MPB spatio-temporal variability and its potential drivers. Processes operating on smaller scales however, such as the impact of benthic macrofauna on MPB development, to date remain underinvestigated. In this study, we analysed the influence of wild Crassostrea gigas oyster reefs on MPB biofilm development using multispectral RS. A 30-year time series (1985-2015) combining high-resolution (30 m) Landsat and SPOT data was built in order to explore the relationship between C. gigas reefs and MPB spatial distribution and seasonal dynamics, using the normalized difference vegetation index (NDVI). Emphasis was placed on the analysis of a before-after control-impact (BACI) experiment designed to assess the effect of oyster killing on the surrounding MPB biofilms. Our RS data reveal that the presence of oyster reefs positively affects MPB biofilm development. Analysis of the historical time series first showed the presence of persistent, highly concentrated MPB patches around oyster reefs. This observation was supported by the BACI experiment which showed that killing the oysters (while leaving the physical reef structure, i.e. oyster shells, intact) negatively affected both MPB biofilm biomass and spatial stability around the reef. As such, our results are consistent with the hypothesis of nutrient input as an explanation for the MPB growth-promoting effect of oysters, whereby organic and inorganic matter released through oyster excretion and biodeposition stimulates MPB biomass accumulation. MPB also showed marked seasonal variations in biomass and patch shape, size and degree of aggregation around the oyster reefs. Seasonal variations in biomass, with higher NDVI during spring and autumn, were consistent with those observed on broader scales in other European mudflats. Our study provides the

  13. The ecology of intertidal oyster reefs of the South Atlantic Coast: A community profile

    Bahr, Leonard M.; Lanier, William P.

    1981-01-01

    The functional role of the intertidal oyster reef community in the southeastern Atlantic coastal zone is described. This description is based on a compilation of published data, as well as some unpublished information presented as hypotheses. The profile is organized in a hierarchical manner, such that relevant details of reef oyster biology (autecology) are presented, followed by a description of the reef community level of organization. Then the reef community is described as a subsystem of the coastal marsh-ecosystem (synecoloqy). This information is also synthesized in a series of nested conceptual models of oyster reefs at the regional level, the drainage basin level, and the individual reef level. The final chapter includes a summary overview and a section on management implications and guidelines. Intertidal oyster reefs are relatively persistent features of the salt marsh estuarine ecosystem in the southeastern Atlantic coastal zone. The average areal extent of the oyster reef subsystem in this larger ecosystem is relatively small (about 0.05%). This proportion does not reflect, however, the functional importance of the reef subsystem in stablizing the marsh, providing food for estuarine consumers, mineralizing organic matter, and providing firm substrates in this otherwise soft environment.

  14. Testing the effect of habitat structure and complexity on nekton assemblages using experimental oyster reefs

    Humphries, Austin T.; LaPeyre, Megan K.; Kimball, Matthew E.; Rozas, Lawrence P.

    2011-01-01

    Structurally complex habitats are often associated with more diverse and abundant species assemblages in both aquatic and terrestrial ecosystems. Biogenic reefs formed by the eastern oyster (Crassostrea virginica) are complex in nature and are recognized for their potential habitat value in estuarine systems along the US Atlantic and Gulf of Mexico coasts. Few studies, however, have examined the response of nekton to structural complexity within oyster reefs. We used a quantitative sampling technique to examine how the presence and complexity of experimental oyster reefs influence the abundance, biomass, and distribution of nekton by sampling reefs 4 months and 16 months post-construction. Experimental oyster reefs were colonized immediately by resident fishes and decapod crustaceans, and reefs supported a distinct nekton assemblage compared to mud-bottom habitat. Neither increased reef complexity, nor age of the experimental reef resulted in further changes in nekton assemblages or increases in nekton abundance or diversity. The presence of oyster reefs per se was the most important factor determining nekton usage.

  15. Surveying a fossil oyster reef using terrestrial laser scanning

    Haring, A.; Exner, U.; Harzhauser, M.

    2009-04-01

    The Korneuburg Basin, situated north-west of Vienna, is well known to contain a rich variety of fossils from the Early Miocene (16.5 ma) and therefore has been investigated extensively by scientists in the past decades. An exceptional discovery was made in 2005: a large fossil oyster reef has been excavated and documented carefully during the last years. Aside from the giant-sized oyster (Crassostrea gryphoides), the excavation site contains numerous species of molluscs along with teeth of sharks and rays and even isolated bones of sea cows. The oysters, having lengths of up to 80 cm, are protruding from the ground surface, which is more or less a tilted plane (25˚ ) with a size of about 300 m2. The entire site is crosscut by a network of geological faults, often also offsetting individual oyster shells. Displacements along the normal faults do not exceed ~ 15 cm. The faulted fossils offer a unique opportunity to measure displacement distribution along the faults in great detail and provide insight in deformation mechanisms in porous, barely lithified sediments. In order to get a precise 3D model of the oyster reef, the terrestrial laser scanner system Leica HDS 6000 is used. It is a phase-based laser scanner, i.e. the distance measurement is performed using the phase-shift principle. Compared to the time-of-flight principle, this method is generally more appropriate to projects like this one, where the distances to be measured are relatively small (< 35 m) and where a high point density (point spacing of about 1 cm) and precision (some mm) is required for capturing the oysters adequately. However, due to fact that they occlude each other, one single scan is not sufficient to get all sides of their surface. Therefore, scans from different positions had to be acquired. These scans have to be merged, which involves the problem of sensor orientation as well as sampling of the entire 3D point cloud. Furthermore, a representation of the surface data is required that

  16. Use of oyster reef and salt marsh habitat by estuarine macrofauna and infauna at Confederate Reef and Galveston Island State Park (Texas) during December 1988 and July 1989.

    National Oceanic and Atmospheric Administration, Department of Commerce — In December 1988 and July 1989, samples were collected at Confederate Reef and at Galveston Island State Park to assess an oyster reef and adjacent areas as nursery...

  17. Structural and compositional characterization of the adhesive produced by reef building oysters.

    Alberts, Erik M; Taylor, Stephen D; Edwards, Stephanie L; Sherman, Debra M; Huang, Chia-Ping; Kenny, Paul; Wilker, Jonathan J

    2015-04-29

    Oysters have an impressive ability to overcome difficulties of life within the stressful intertidal zone. These shellfish produce an adhesive for attaching to each other and building protective reef communities. With their reefs often exceeding kilometers in length, oysters play a major role in balancing the health of coastal marine ecosystems. Few details are available to describe oyster adhesive composition or structure. Here several characterization methods were applied to describe the nature of this material. Microscopy studies indicated that the glue is comprised of organic fiber-like and sheet-like structures surrounded by an inorganic matrix. Phospholipids, cross-linking chemistry, and conjugated organics were found to differentiate this adhesive from the shell. Symbiosis in material synthesis could also be present, with oysters incorporating bacterial polysaccharides into their adhesive. Oyster glue shows that an organic-inorganic composite material can provide adhesion, a property especially important when constructing a marine ecosystem.

  18. Effects of an artificial oyster shell reef on macrobenthic communities in Rongcheng Bay, East China

    Xu, Qinzeng; Zhang, Libin; Zhang, Tao; Zhou, Yi; Xia, Sudong; Liu, Hui; Yang, Hongsheng

    2014-01-01

    An artificial oyster shell reef was deployed in Rongcheng Bay, East China. However, the effects of this reef on the surrounding macrobenthic communities were unknown. We compared sedimentary factors, macrobenthic biomass, abundance, and community composition and ecological indicators between the reef and non-reef areas over a one year period. The mean values for chlorophyll a (Chl a), total organic matter (TOM), total organic carbon (TOC), and total nitrogen (TN) content in surface sediments in the reef area were slightly higher than those in the non-reef area. The Chl a levels differed significantly between the two areas, but the TOM, TOC, and TN were not significantly different. The abundance of crustaceans was significantly different between the two areas, but the abundance and biomass of polychaetes, echinoderms, mollusk did not differ significantly. The permutational multivariate analysis of variance (PERMANOVA) revealed that the macrobenthic community differed significantly through time and analysis of similarity multivariate analyses (ANOSIM) revealed that the macrobenthic community differed significantly in some months. The ecological indicators revealed that the environmental quality of the reef area was slightly better than that of the non-reef area. Overall, our results suggest that the artificial oyster shell reef may change the macrobenthic community and the quality of the environment. Despite the lack of an effect in the short term, long-term monitoring is still needed to evaluate the effects of artificial oyster shell reefs on macrobenthic communities.

  19. Oyster reefs as natural breakwaters mitigate shoreline loss and facilitate fisheries.

    Steven B Scyphers

    Full Text Available Shorelines at the interface of marine, estuarine and terrestrial biomes are among the most degraded and threatened habitats in the coastal zone because of their sensitivity to sea level rise, storms and increased human utilization. Previous efforts to protect shorelines have largely involved constructing bulkheads and seawalls which can detrimentally affect nearshore habitats. Recently, efforts have shifted towards "living shoreline" approaches that include biogenic breakwater reefs. Our study experimentally tested the efficacy of breakwater reefs constructed of oyster shell for protecting eroding coastal shorelines and their effect on nearshore fish and shellfish communities. Along two different stretches of eroding shoreline, we created replicated pairs of subtidal breakwater reefs and established unaltered reference areas as controls. At both sites we measured shoreline and bathymetric change and quantified oyster recruitment, fish and mobile macro-invertebrate abundances. Breakwater reef treatments mitigated shoreline retreat by more than 40% at one site, but overall vegetation retreat and erosion rates were high across all treatments and at both sites. Oyster settlement and subsequent survival were observed at both sites, with mean adult densities reaching more than eighty oysters m(-2 at one site. We found the corridor between intertidal marsh and oyster reef breakwaters supported higher abundances and different communities of fishes than control plots without oyster reef habitat. Among the fishes and mobile invertebrates that appeared to be strongly enhanced were several economically-important species. Blue crabs (Callinectes sapidus were the most clearly enhanced (+297% by the presence of breakwater reefs, while red drum (Sciaenops ocellatus (+108%, spotted seatrout (Cynoscion nebulosus (+88% and flounder (Paralichthys sp. (+79% also benefited. Although the vertical relief of the breakwater reefs was reduced over the course of our study

  20. Trade-off between increased survival and reduced growth for blue mussels living on Pacific oyster reefs

    Eschweiler, Nina; Christensen, Helle Torp

    2011-01-01

    Pacific oysters Crassostrea gigas (Thunberg 1793) have been introduced into the Wadden Sea (North Sea, Germany) in the mid of the 1980s and have invaded native blue mussel Mytilus edulis (L.) beds. The latter turned into oyster reefs where mussels seem to be relegated to the bottom in between...... the much larger oysters. By combining field and laboratory experiments, we reveal how mussels react to cohabitation with the invasive oysters. Mussels subjected to direct contact with crabs Carcinus maenas migrate from top to bottom positions between oysters in both field and laboratory experiments within...... 22days. Shell growth was significantly reduced for mussels placed on the bottom compared to mussels at the top of an oyster reef. Condition index was lower for mussels on the bottom of the reef irrespective of whether placed between dead or living oysters. We conclude that mussels experience a trade...

  1. OYSTER POPULATUION ESTIMATION IN SUPPORT OF THE TEN-YEAR GOAL FOR OYSTER RESOTRATION IN THE CHESAPEAKE BAY: DEVELOPING STRATEGIES FOR RESTORING AND MANAGING THE EASTERN OYSTER

    Mann, Roger, Steve Jordan, Gary Smith, Kennedy Paynter, James Wesson, Mary Christman, Jessica Vanisko, Juliana Harding, Kelly Greenhawk and Melissa Southworth. 2003. Oyster Population Estimation in Support of the Ten-Year Goal for Oyster Restoration in the Chesapeake Bay: Develop...

  2. Loss of an ecological baseline through the eradication of oyster reefs from coastal ecosystems and human memory.

    Alleway, Heidi K; Connell, Sean D

    2015-06-01

    Oyster reefs form over extensive areas and the diversity and productivity of sheltered coasts depend on them. Due to the relatively recent population growth of coastal settlements in Australia, we were able to evaluate the collapse and extirpation of native oyster reefs (Ostrea angasi) over the course of a commercial fishery. We used historical records to quantify commercial catch of O. angasi in southern Australia from early colonization, around 1836, to some of the last recorded catches in 1944 and used our estimates of catch and effort to map their past distribution and assess oyster abundance over 180 years. Significant declines in catch and effort occurred from 1886 to 1946 and no native oyster reefs occur today, but historically oyster reefs extended across more than 1,500 km of coastline. That oyster reefs were characteristic of much of the coastline of South Australia from 1836 to 1910 appears not to be known because there is no contemporary consideration of their ecological and economic value. Based on the concept of a shifted baseline, we consider this contemporary state to reflect a collective, intergenerational amnesia. Our model of generational amnesia accounts for differences in intergenerational expectations of food, economic value, and ecosystem services of nearshore areas. An ecological system that once surrounded much of the coast and possibly the past presence of oyster reefs altogether may be forgotten and could not only undermine progress towards their recovery, but also reduce our expectations of these coastal ecosystems. © 2015 Society for Conservation Biology.

  3. PROGRESSION OF DISEASES CAUSED BY THE OYSTER PARASITES, PERKINSUS MARINUS AND HAPLOSPORIDIUM NELSONI, IN CRASSOSTREA VIRGINICA ON CONSTRUCTED INTERTIDAL REEFS

    The progression of diseases caused by the oyster parasites, Perkinsus marinus and Haplosporidium nelsoni, were evaluated by periodic sampling (May 1994-Dec. 1995) of oysters, Crassostrea virginica, that set on an artificial reef located in the Piankatank River, Virginia, in Augus...

  4. Investigation of coal combustion by-product utilization for oyster reef development in Texas bay waters

    Baker, W.B. Jr.; Ray, S.M.; Landry, A.M. Jr.

    1991-01-01

    Houston Lighting and Power Company (HL and P), Texas A and M University at Galveston and JTM Industries, Inc. initiated research in May 1988 and coordinated it with state and federal resource protection agencies to investigate the use of certain HL and P coal combustion by-products (CCBP) for enhancing and creating oyster reefs. Initial research involved determining and optimum mix design based on compressive strength, leaching potential, biofouling success, and cost. CCBP material was found to exceed compressive strength criterion (300 psi for at sign 14 days) and was not a significant leaching source. Candidate mix designs and oyster shell controls were exposed to hatchery-reared oyster larvae to determine spat setability and biofouling success. Larvae setting on CCBP substrate developed into spat and grew at a rate comparable to that for larvae on controls. Since all candidate mix designs exhibited excellent biofouling, an optimum design was chosen based on strength and material cost factors. Chemical analyses conducted to determine materials did not significantly contribute to the trace element load in oysters. Development of oyster cultch material was initiated with input from commercial 2.5 to 7.6 cm (1 to 3 inch) diameter pellets which are irregularly shaped and rough textured. These pellets greatly enhance water circulation, provide maximum setting potential for oyster larvae, and maximize the surface area to volume potential of the CCBP material

  5. Influence of an oyster reef on development of the microbial heterotrophic community of an estuarine biofilm.

    Nocker, Andreas; Lepo, Joe E; Snyder, Richard A

    2004-11-01

    We characterized microbial biofilm communities developed over two very closely located but distinct benthic habitats in the Pensacola Bay estuary using two complementary cultivation-independent molecular techniques. Biofilms were grown for 7 days on glass slides held in racks 10 to 15 cm over an oyster reef and an adjacent muddy sand bottom. Total biomass and optical densities of dried biofilms showed dramatic differences for oyster reef versus non-oyster reef biofilms. This study assessed whether the observed spatial variation was reflected in the heterotrophic prokaryotic species composition. Genomic biofilm DNA from both locations was isolated and served as a template to amplify 16S rRNA genes with universal eubacterial primers. Fluorescently labeled PCR products were analyzed by terminal restriction fragment length polymorphism, creating a genetic fingerprint of the composition of the microbial communities. Unlabeled PCR products were cloned in order to construct a clone library of 16S rRNA genes. Amplified ribosomal DNA restriction analysis was used to screen and define ribotypes. Partial sequences from unique ribotypes were compared with existing database entries to identify species and to construct phylogenetic trees representative of community structures. A pronounced difference in species richness and evenness was observed at the two sites. The biofilm community structure from the oyster reef setting had greater evenness and species richness than the one from the muddy sand bottom. The vast majority of the bacteria in the oyster reef biofilm were related to members of the gamma- and delta-subdivisions of Proteobacteria, the Cytophaga-Flavobacterium -Bacteroides cluster, and the phyla Planctomyces and Holophaga-Acidobacterium. The same groups were also present in the biofilm harvested at the muddy sand bottom, with the difference that nearly half of the community consisted of representatives of the Planctomyces phylum. Total species richness was estimated

  6. [Estimation and experiment of carbon sequestration by oysters attached to the enhancement artificial reefs in Laizhou Bay, Shandong, China].

    Gong, Pi-Hai; Li, Jiao; Guan, Chang-Tao; Li, Meng-Jie; Liu, Chao

    2014-10-01

    Through sampling investigation of fouling organisms on the enhancement artificial reefs set up in Laizhou Bay, it was proved that oyster (Ostrea plicatula) was the dominant fouling species. Therefore the dry mass of shell (Ms), total fresh mass (Mt) and thickness (T) of oyster attached on the reefs were analyzed. The results showed that the Mt and Ms presented seasonal variation (P oysters attaching to the tube enhancement reefs constructed in 2009, 2010 and 2011 in Laizhou Bay were 17.61, 16.33 and 10.45 kg · m(-3), respectively. The oysters on the enhancement reefs of Jincheng marine ranch with an area of 64.25 hm2 had fixed carbon of 297.5 t C (equivalent to 1071 t of CO2) from 2009 to 2013 in Laizhou Bay. To capture and store the same amount of CO2 would cost about 1.6 x 10(5)-6.4 x 10(5) US dollars. Therefore, oysters attaching to the enhancement reefs bring about remarkable ecological benefits.

  7. Restoration of a temperate reef: Effects on the fish community

    Støttrup, Josianne; Stenberg, Claus; Dahl, Karsten

    2014-01-01

    Trindel in Kattegat, Denmark, has now been re-established with the aim of restoring the reef’s historical structure and function. The effects of the restoration on the local fish community are reported here. Fishing surveys using gillnets and fyke nets were conducted before the restoration (2007) and four...... years after the restoration of the reef (2012). Species of the family Labridae, which have a high affinity for rocky reefs, dominated both before and after the restoration. Commercially important species such as cod Gadus morhua, and saithe Pollachius virens, occurred infrequently in the catches in 2007....... The findings highlight the importance of reef habitats for fish communities and the need for their protection...

  8. Shifting paradigms in restoration of the world's coral reefs.

    van Oppen, Madeleine J H; Gates, Ruth D; Blackall, Linda L; Cantin, Neal; Chakravarti, Leela J; Chan, Wing Y; Cormick, Craig; Crean, Angela; Damjanovic, Katarina; Epstein, Hannah; Harrison, Peter L; Jones, Thomas A; Miller, Margaret; Pears, Rachel J; Peplow, Lesa M; Raftos, David A; Schaffelke, Britta; Stewart, Kristen; Torda, Gergely; Wachenfeld, David; Weeks, Andrew R; Putnam, Hollie M

    2017-09-01

    Many ecosystems around the world are rapidly deteriorating due to both local and global pressures, and perhaps none so precipitously as coral reefs. Management of coral reefs through maintenance (e.g., marine-protected areas, catchment management to improve water quality), restoration, as well as global and national governmental agreements to reduce greenhouse gas emissions (e.g., the 2015 Paris Agreement) is critical for the persistence of coral reefs. Despite these initiatives, the health and abundance of corals reefs are rapidly declining and other solutions will soon be required. We have recently discussed options for using assisted evolution (i.e., selective breeding, assisted gene flow, conditioning or epigenetic programming, and the manipulation of the coral microbiome) as a means to enhance environmental stress tolerance of corals and the success of coral reef restoration efforts. The 2014-2016 global coral bleaching event has sharpened the focus on such interventionist approaches. We highlight the necessity for consideration of alternative (e.g., hybrid) ecosystem states, discuss traits of resilient corals and coral reef ecosystems, and propose a decision tree for incorporating assisted evolution into restoration initiatives to enhance climate resilience of coral reefs. © 2017 John Wiley & Sons Ltd.

  9. Deeply hidden inside introduced biogenic structures - Pacific oyster reefs reduce detrimental barnacle overgrowth on native blue mussels

    Buschbaum, Christian; Cornelius, Annika; Goedknegt, M. Anouk

    2016-11-01

    In sedimentary coastal ecosystems shells of epibenthic organisms such as blue mussels (Mytilus edulis) provide the only major attachment surface for barnacle epibionts, which may cause detrimental effects on their mussel basibionts by e.g. reducing growth rate. In the European Wadden Sea, beds of native blue mussels have been invaded by Pacific oysters Crassostrea gigas, which transformed these beds into mixed reefs of oysters with mussels. In this study, we determined the spatial distribution of M. edulis and their barnacle epibionts (Semibalanus balanoides) within the reef matrix. Mean mussel density near the bottom was about twice as high compared to the mussel density near the top of an oyster reef, whereas barnacles on mussels showed a reversed pattern. Barnacle dry weight per mussel was on average 14 times higher near the top than at the bottom. This pattern was confirmed by experimentally placing clean M. edulis at the top and on the bottom of oyster reefs at two sites in the Wadden Sea (island of Texel, The Netherlands; island of Sylt, Germany). After an experimental period of five weeks (April and May 2015, the main settlement period of S. balanoides), the number of barnacles per mussel was at both sites significantly higher on mussels near the top compared to near the bottom. We conclude that the oyster reef matrix offers a refuge for M. edulis: inside reefs they are not only better protected against predators but also against detrimental barnacle overgrowth. This study shows that alien species can cause beneficial effects for native organisms and should not be generally considered as a risk for the recipient marine ecosystems.

  10. Application of Reflectance Transformation Imaging Technique to Improve Automated Edge Detection in a Fossilized Oyster Reef

    Djuricic, Ana; Puttonen, Eetu; Harzhauser, Mathias; Dorninger, Peter; Székely, Balázs; Mandic, Oleg; Nothegger, Clemens; Molnár, Gábor; Pfeifer, Norbert

    2016-04-01

    The world's largest fossilized oyster reef is located in Stetten, Lower Austria excavated during field campaigns of the Natural History Museum Vienna between 2005 and 2008. It is studied in paleontology to learn about change in climate from past events. In order to support this study, a laser scanning and photogrammetric campaign was organized in 2014 for 3D documentation of the large and complex site. The 3D point clouds and high resolution images from this field campaign are visualized by photogrammetric methods in form of digital surface models (DSM, 1 mm resolution) and orthophoto (0.5 mm resolution) to help paleontological interpretation of data. Due to size of the reef, automated analysis techniques are needed to interpret all digital data obtained from the field. One of the key components in successful automation is detection of oyster shell edges. We have tested Reflectance Transformation Imaging (RTI) to visualize the reef data sets for end-users through a cultural heritage viewing interface (RTIViewer). The implementation includes a Lambert shading method to visualize DSMs derived from terrestrial laser scanning using scientific software OPALS. In contrast to shaded RTI no devices consisting of a hardware system with LED lights, or a body to rotate the light source around the object are needed. The gray value for a given shaded pixel is related to the angle between light source and the normal at that position. Brighter values correspond to the slope surfaces facing the light source. Increasing of zenith angle results in internal shading all over the reef surface. In total, oyster reef surface contains 81 DSMs with 3 m x 2 m each. Their surface was illuminated by moving the virtual sun every 30 degrees (12 azimuth angles from 20-350) and every 20 degrees (4 zenith angles from 20-80). This technique provides paleontologists an interactive approach to virtually inspect the oyster reef, and to interpret the shell surface by changing the light source direction

  11. 75 FR 21650 - Coral Reef Restoration Plan, Draft Programmatic Environmental Impact Statement, Biscayne National...

    2010-04-26

    ... DEPARTMENT OF THE INTERIOR National Park Service Coral Reef Restoration Plan, Draft Programmatic... Coral Reef Restoration Plan, Biscayne National Park. SUMMARY: Pursuant to the National Environmental... availability of a Draft Programmatic Environmental Impact Statement (DEIS) for the Coral Reef Restoration Plan...

  12. 76 FR 24050 - Coral Reef Restoration Plan, Final Programmatic Environmental Impact Statement, Biscayne National...

    2011-04-29

    ... DEPARTMENT OF THE INTERIOR National Park Service [2310-0003-422] Coral Reef Restoration Plan... for the Coral Reef Restoration Plan, Biscayne National Park. SUMMARY: Pursuant to the National... availability of a Final Programmatic Environmental Impact Statement for the Coral Reef Restoration Plan (Plan...

  13. Novel tradable instruments in the conservation of coral reefs, based on the coral gardening concept for reef restoration.

    Rinkevich, Baruch

    2015-10-01

    Nearly all coral reefs bordering nations have experienced net losses in reef biodiversity, goods and services, even without considering the ever-developing global change impacts. In response, this overview wishes to reveal through prospects of active reef-restoration, the currently non-marketed or poorly marketed reef services, focusing on a single coral species (Stylophora pistillata). It is implied that the integration of equity capitals and other commodification with reef-restoration practices will improve total reef services. Two tiers of market-related activities are defined, the traditional first-tier instruments (valuating costs/gains for extracting tradable goods and services) and novel second-tier instruments (new/expanded monetary tools developed as by-products of reef restoration measures). The emerging new suite of economic mechanisms based on restoration methodologies could be served as an incentive for ecosystem conservation, enhancing the sum values of all services generated by coral reefs, where the same stocks of farmed/transplanted coral colonies will be used as market instruments. I found that active restoration measures disclose 12 classes of second-tier goods and services, which may partly/wholly finance restoration acts, bringing to light reef capitalizations that allow the expansion of markets with products that have not been considered before. The degree to which the second tier of market-related services could buffer coral-reef degradation is still unclear and would vary with different reef types and in various reef restoration scenarios; however, reducing the uncertainty associated with restoration. It is expected that the expansion of markets with the new products and the enhancement of those already existing will be materialized even if reef ecosystems will recover into different statuses. Copyright © 2015 Elsevier Ltd. All rights reserved.

  14. Conservation, management, and restoration of coral reefs.

    Chavanich, Suchana; Soong, Keryea; Zvuloni, Assaf; Rinkevich, Baruch; Alino, Porfirio

    2015-04-01

    The 8th International Conference on Coelenterate Biology (ICCB 8) was held in Eilat, Israel from December 1st to 5th 2013. The conference included 15 sessions, one of which discussed the latest information on the conservation, management, and restoration of Coelenterata in different parts of the world. A total of 16 oral presentations and 5 posters were presented in this session. Of these 21 papers, 11 were related to conservation issues, 7 described management, and 3 discussed restoration. This session provided insights on the current conservation, management, and restoration of coelenterates in different parts of the world. Copyright © 2015 Elsevier GmbH. All rights reserved.

  15. A restoration genetics guide for coral reef conservation.

    Baums, Iliana B

    2008-06-01

    Worldwide degradation of coral reef communities has prompted a surge in restoration efforts. They proceed largely without considering genetic factors because traditionally, coral populations have been regarded as open over large areas with little potential for local adaptation. Since, biophysical and molecular studies indicated that most populations are closed over shorter time and smaller spatial scales. Thus, it is justified to re-examine the potential for site adaptation in corals. There is ample evidence for differentiated populations, inbreeding, asexual reproduction and the occurrence of ecotypes, factors that may facilitate local adaptation. Discovery of widespread local adaptation would influence coral restoration projects mainly with regard to the physical and evolutionary distance from the source wild and/or captive bred propagules may be moved without causing a loss of fitness in the restored population. Proposed causes for loss of fitness as a result of (plant) restoration efforts include founder effects, genetic swamping, inbreeding and/or outbreeding depression. Direct evidence for any of these processes is scarce in reef corals due to a lack of model species that allow for testing over multiple generations and the separation of the relative contributions of algal symbionts and their coral hosts to the overall performance of the coral colony. This gap in our knowledge may be closed by employing novel population genetic and genomics approaches. The use of molecular tools may aid managers in the selection of appropriate propagule sources, guide spatial arrangement of transplants, and help in assessing the success of coral restoration projects by tracking the performance of transplants, thereby generating important data for future coral reef conservation and restoration projects.

  16. The effect of structural complexity, prey density, and "predator-free space" on prey survivorship at created oyster reef mesocosms

    Humphries, Austin T.; La Peyre, Megan K.; Decossas, Gary A.

    2011-01-01

    Interactions between predators and their prey are influenced by the habitat they occupy. Using created oyster (Crassostrea virginica) reef mesocosms, we conducted a series of laboratory experiments that created structure and manipulated complexity as well as prey density and “predator-free space” to examine the relationship between structural complexity and prey survivorship. Specifically, volume and spatial arrangement of oysters as well as prey density were manipulated, and the survivorship of prey (grass shrimp, Palaemonetes pugio) in the presence of a predator (wild red drum, Sciaenops ocellatus) was quantified. We found that the presence of structure increased prey survivorship, and that increasing complexity of this structure further increased survivorship, but only to a point. This agrees with the theory that structural complexity may influence predator-prey dynamics, but that a threshold exists with diminishing returns. These results held true even when prey density was scaled to structural complexity, or the amount of “predator-free space” was manipulated within our created reef mesocosms. The presence of structure and its complexity (oyster shell volume) were more important in facilitating prey survivorship than perceived refugia or density-dependent prey effects. A more accurate indicator of refugia might require “predator-free space” measures that also account for the available area within the structure itself (i.e., volume) and not just on the surface of a structure. Creating experiments that better mimic natural conditions and test a wider range of “predator-free space” are suggested to better understand the role of structural complexity in oyster reefs and other complex habitats.

  17. Interspecific Hybridization May Provide Novel Opportunities for Coral Reef Restoration

    Wing Yan Chan

    2018-05-01

    Full Text Available Climate change and other anthropogenic disturbances have created an era characterized by the inability of most ecosystems to maintain their original, pristine states, the Anthropocene. Investigating new and innovative strategies that may facilitate ecosystem restoration is thus becoming increasingly important, particularly for coral reefs around the globe which are deteriorating at an alarming rate. The Great Barrier Reef (GBR lost half its coral cover between 1985 and 2012, and experienced back-to-back heat-induced mass bleaching events and high coral mortality in 2016 and 2017. Here we investigate the efficacy of interspecific hybridization as a tool to develop coral stock with enhanced climate resilience. We crossed two Acropora species pairs from the GBR and examined several phenotypic traits over 28 weeks of exposure to ambient and elevated temperature and pCO2. While elevated temperature and pCO2 conditions negatively affected size and survival of both purebreds and hybrids, higher survival and larger recruit size were observed in some of the hybrid offspring groups under both ambient and elevated conditions. Further, interspecific hybrids had high fertilization rates, normal embryonic development, and similar Symbiodinium uptake and photochemical efficiency as purebred offspring. While the fitness of these hybrids in the field and their reproductive and backcrossing potential remain to be investigated, current findings provide proof-of-concept that interspecific hybridization may produce genotypes with enhanced climate resilience, and has the potential to increase the success of coral reef restoration initiatives.

  18. Conservation of coral reefs through active restoration measures: recent approaches and last decade progress.

    Rinkevich, Baruch

    2005-06-15

    The scientific discipline of active restoration of denuded coral reef areas has drawn much attention in the past decade as it became evident that this ecosystem does not often recover naturally from anthropogenic stress without manipulation. Essentially, the choices are eitherthe continuous degradation of the reefs or active restoration to encourage reef development. As a result, worldwide restoration operations during the past decade have been recognized as being a major tool for reef rehabilitation. This situation has also stirred discussions and debates on the various restoration measures suggested as management options, supplementary to the traditional conservation acts. The present essay reviews past decade's (1994-2004) approaches and advances in coral reef restoration. While direct coral transplantation is still the primer vehicle of operations used, the concept of in situ and ex situ coral nurseries (the gardening concept), where coral materials (nubbins, branches, spats) are maricultured to a size suitable for transplantation, has been gaining recognition. The use of nubbins (down to the size of a single or few polyps) has been suggested and employed as a unique technique for mass production of coral colonies. Restoration of ship grounding sites and the use of artificial reefs have become common tools for specific restoration needs. Substrate stabilization, 3-D structural consideration of developing colonies, and the use of molecular/biochemical tools are part of novel technology approaches developed in the past decade. Economic considerations for reef restoration have become an important avenue for evaluating success of restoration activities. It has been suggested that landscape restoration and restoration genetics are important issues to be studied. In the future, as coral reef restoration may become the dominant conservation act, there would be the need not only to develop improved protocols but also to define the conceptual bases.

  19. Handbook on Coral Reef Impacts: Avoidance, Minimization, Compensatory Mitigation, and Restoration

    This Handbook provides a general summary of current avoidance, minimization, compensatory mitigation, and restoration strategies that may help address physical damage resulting from direct adverse impacts to coral reefs.

  20. Millennial-scale sustainability of the Chesapeake Bay Native American oyster fishery.

    Rick, Torben C; Reeder-Myers, Leslie A; Hofman, Courtney A; Breitburg, Denise; Lockwood, Rowan; Henkes, Gregory; Kellogg, Lisa; Lowery, Darrin; Luckenbach, Mark W; Mann, Roger; Ogburn, Matthew B; Southworth, Melissa; Wah, John; Wesson, James; Hines, Anson H

    2016-06-07

    Estuaries around the world are in a state of decline following decades or more of overfishing, pollution, and climate change. Oysters (Ostreidae), ecosystem engineers in many estuaries, influence water quality, construct habitat, and provide food for humans and wildlife. In North America's Chesapeake Bay, once-thriving eastern oyster (Crassostrea virginica) populations have declined dramatically, making their restoration and conservation extremely challenging. Here we present data on oyster size and human harvest from Chesapeake Bay archaeological sites spanning ∼3,500 y of Native American, colonial, and historical occupation. We compare oysters from archaeological sites with Pleistocene oyster reefs that existed before human harvest, modern oyster reefs, and other records of human oyster harvest from around the world. Native American fisheries were focused on nearshore oysters and were likely harvested at a rate that was sustainable over centuries to millennia, despite changing Holocene climatic conditions and sea-level rise. These data document resilience in oyster populations under long-term Native American harvest, sea-level rise, and climate change; provide context for managing modern oyster fisheries in the Chesapeake Bay and elsewhere around the world; and demonstrate an interdisciplinary approach that can be applied broadly to other fisheries.

  1. Restoration of a boulder reef in temperate waters: Strategy, methodology and lessons learnt

    Støttrup, Josianne Gatt; Dahl, Karsten; Niemann, Sanne

    2017-01-01

    Anthropogenic impacts on marine habitats are a global problem, particularly in coastal areas. While boulder reefs in temperate waters hold high biomass and biodiversity, and may be unable to recover from anthropogenic stressors without restoration efforts, little is known about how to restore and...

  2. Predicting the effects of proposed Mississippi River diversions on oyster habitat quality; application of an oyster habitat suitability index model

    Soniat, Thomas M.; Conzelmann, Craig P.; Byrd, Jason D.; Roszell, Dustin P.; Bridevaux, Joshua L.; Suir, Kevin J.; Colley, Susan B.

    2013-01-01

    In an attempt to decelerate the rate of coastal erosion and wetland loss, and protect human communities, the state of Louisiana developed its Comprehensive Master Plan for a Sustainable Coast. The master plan proposes a combination of restoration efforts including shoreline protection, marsh creation, sediment diversions, and ridge, barrier island, and hydrological restoration. Coastal restoration projects, particularly the large-scale diversions of fresh water from the Mississippi River, needed to supply sediment to an eroding coast potentially impact oyster populations and oyster habitat. An oyster habitat suitability index model is presented that evaluates the effects of a proposed sediment and freshwater diversion into Lower Breton Sound. Voluminous freshwater, needed to suspend and broadly distribute river sediment, will push optimal salinities for oysters seaward and beyond many of the existing reefs. Implementation and operation of the Lower Breton Sound diversion structure as proposed would render about 6,173 ha of hard bottom immediately east of the Mississippi River unsuitable for the sustained cultivation of oysters. If historical harvests are to be maintained in this region, a massive and unprecedented effort to relocate private leases and restore oyster bottoms would be required. Habitat suitability index model results indicate that the appropriate location for such efforts are to the east and north of the Mississippi River Gulf Outlet.

  3. Large-scale coral reef restoration could assist natural recovery in Seychelles, Indian Ocean

    Phanor Hernando Montoya Maya

    2016-11-01

    Full Text Available The aim of ecological restoration is to establish self-sustaining and resilient systems. In coral reef restoration, transplantation of nursery-grown corals is seen as a potential method to mitigate reef degradation and enhance recovery. The transplanted reef should be capable of recruiting new juvenile corals to ensure long-term resilience. Here, we quantified how coral transplantation influenced natural coral recruitment at a large-scale coral reef restoration site in Seychelles, Indian Ocean. Between November 2011 and June 2014 a total of 24,431 nursery-grown coral colonies from 10 different coral species were transplanted in 5,225 m2 (0.52 ha of degraded reef at the no-take marine reserve of Cousin Island Special Reserve in an attempt to assist in natural reef recovery. We present the results of research and monitoring conducted before and after coral transplantation to evaluate the positive effect that the project had on coral recruitment and reef recovery at the restored site. We quantified the density of coral recruits (spat <1 cm and juveniles (colonies 1-5 cm at the transplanted site, a degraded control site and a healthy control site at the marine reserve. We used ceramic tiles to estimate coral settlement and visual surveys with 1 m2 quadrats to estimate coral recruitment. Six months after tile deployment, total spat density at the transplanted site (123.4 ± 13.3 spat m-2 was 1.8 times higher than at healthy site (68.4 ± 7.8 spat m-2 and 1.6 times higher than at degraded site (78.2 ± 7.17 spat m-2. Two years after first transplantation, the total recruit density was highest at healthy site (4.8 ± 0.4 recruits m-2, intermediate at transplanted site (2.7 ± 0.4 recruits m-2, and lowest at degraded site (1.7 ± 0.3 recruits m-2. The results suggest that large-scale coral restoration may have a positive influence on coral recruitment and juveniles. The effect of key project techniques on the results are discussed. This study supports

  4. Best practice for restoration of stone reefs in Denmark (codes of conduct)

    Dahl, Karsten; Støttrup, Josianne Gatt; Stenberg, Claus

    . A set of specific biological and environmental objectives that can influence the choice of design of the new reef structure is also presented. The report also includes a set of recommendations for the construction phase, requirements for safety navigation when the restoration work is finalized...

  5. Clash of the crabs: Interspecific, inter-cohort competition between the native European green crab, Carcinus maenas and the exotic brush clawed crab Hemigrapsus takanoi on artificial oyster reefs

    van den Brink, Anneke; Hutting, Samara

    2017-10-01

    Interaction between cohorts was investigated with juveniles of the native crab Carcinus maenas and adults of the exotic crab Hemigrapsus takanoi on artificial, intertidal oyster reefs. The reefs are occupied by C. maenas seasonally as a nursery habitat and consistently by adult H. takanoi. There was a distinct decrease in abundance of C. maenas of the same carapace width as most adult H. takanoi, suggesting competition at this size was occurring. Laboratory experiments indicated that H. takanoi was a more aggressive competitor for food and, with consistently high abundance on the reefs, may result in some exclusion of C. maenas from their nursery habitat. While total exclusion of C. maenas on the oyster reefs is unlikely, cohabitation may result in reduced population size or increased use of alternative nursery habitats.

  6. Habitat use by Red Knots (Calidris canutus rufa): Experiments with oyster racks and reefs on the beach and intertidal of Delaware Bay, New Jersey

    Burger, Joanna; Niles, Lawrence J.

    2017-07-01

    Sea level rise and increasing human activities have decreased intertidal habitat in many places in the world. The expansion of aquaculture in intertidal areas may impact birds and other organisms using these habitats, leading to questions of sustainability of both aquaculture and functioning estuarine ecosystems. Understanding the effect of oyster culture on shorebird activity, particularly on Red Knots (Calidris canutus rufa), a species on the U.S. Threatened List, is important for adaptive management and the expansion of oyster culture. In May 2013 we experimentally compared Red Knot and shorebird use of a beach section with racks and a control, and in 2016 we compared the use of sections with artificial reefs, oyster racks, and control on Delaware Bay, New Jersey (USA). The data included only times when no workers or other people were present. Censuses, conducted every 30 min throughout the day (279 censuses in 2013, 231 censuses in 2016), included the number of Red Knots and other shorebirds in each treatment section. In 2013, the total number of shorebirds was significantly higher in the rack section than in the control section, except for Red Knots and Ruddy Turnstones (Arenaria interpres) that occurred in higher numbers in the control than in the rack section. In 2016 Red Knot numbers were also significantly lower in the rack section. In 2013, the mean number of Red Knots/census was 13 for racks vs 59 for the control (P racks and over 68 for other treatments (P racks while both foraging and roosting, suggesting that caution should be used before placing oyster racks in areas used for foraging by Red Knots.

  7. Testing animal-assisted cleaning prior to transplantation in coral reef restoration.

    Frias-Torres, Sarah; van de Geer, Casper

    2015-01-01

    Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment) site and the nursery (control) site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores) consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals.

  8. Testing animal-assisted cleaning prior to transplantation in coral reef restoration

    Sarah Frias-Torres

    2015-09-01

    Full Text Available Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment site and the nursery (control site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals.

  9. Testing animal-assisted cleaning prior to transplantation in coral reef restoration

    van de Geer, Casper

    2015-01-01

    Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment) site and the nursery (control) site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores) consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals. PMID:26468440

  10. Behavioural changes of Atlantic cod (Gadus morhua) after marine boulder reef restoration: Implications for coastal habitat management and Natura 2000 areas

    Støttrup, Josianne Gatt; Svendsen, Jon Christian; Stenberg, Claus

    2017-01-01

    While marine reefs are degraded globally, the responses of fish to marine reef restoration remain uncertain, particularly in temperate waters. This study measured the effect of marine boulder reef restoration on the behaviour of Atlantic cod, Gadus morhua L., in a Natura 2000 area using acoustic...... telemetry. Cod were tagged and released in the study area before and after the restoration and tracked continuously for six months. A larger fraction of the released fish remained in the study area after restoration (94%) than before (53%). Moreover, throughout the study period, cod spent significantly more...... hours per day and prolonged their residence time in the study area after the restoration. The study indicates that marine reefs subjected to boulder extraction can be restored and function as favourable cod habitats. Temperate marine boulder reef restoration represents a valuable management tool...

  11. Oyster Reef Restoration and Aquaculture Impacts on Denitrification and the Benthic Community

    Human impacts have greatly altered coastal ecosystems through a variety of processes including nutrient enrichment and overfishing. The negative consequences of these actions are well known and include increased macroalgae blooms, low oxygen conditions, and losses of biodiversity...

  12. Density dependence drives habitat production and survivorship of Acropora cervicornis used for restoration on a Caribbean coral reef

    Mark C Ladd

    2016-12-01

    Full Text Available AbstractCoral restoration is gaining traction as a viable strategy to help restore degraded reefs. While the nascent field of coral restoration has rapidly progressed in the past decade, significant knowledge gaps remain regarding the drivers of restoration success that may impede our ability to effectively restore coral reef communities. Here, we conducted a field experiment to investigate the influence of coral density on the growth, habitat production, and survival of corals outplanted for restoration. We used nursery-raised colonies of Acropora cervicornis to experimentally establish populations of corals with either 3, 6, 12, or 24 corals within 4m2 plots, generating a gradient of coral densities ranging from 0.75 corals m-2 to 12 corals m-2. After 13 months we found that density had a significant effect on the growth, habitat production, and survivorship of restored corals. We found that coral survivorship increased as colony density decreased. Importantly, the signal of density dependent effects was context dependent. Our data suggest that positive density dependent effects influenced habitat production at densities of 3 corals m-2, but further increases in density resulted in negative density dependent effects with decreasing growth and survivorship of corals. These findings highlight the importance of density dependence for coral restoration planning and demonstrate the need to evaluate the influence of density for other coral species used for restoration. Further work focused on the mechanisms causing density dependence such as increased herbivory, rapid disease transmission, or altered predation rates are important next steps to advance our ability to effectively restore coral reefs.

  13. The Curious Acoustic Behavior of Estuarine Snapping Shrimp: Temporal Patterns of Snapping Shrimp Sound in Sub-Tidal Oyster Reef Habitat.

    DelWayne R Bohnenstiehl

    Full Text Available Ocean soundscapes convey important sensory information to marine life. Like many mid-to-low latitude coastal areas worldwide, the high-frequency (>1.5 kHz soundscape of oyster reef habitat within the West Bay Marine Reserve (36°N, 76°W is dominated by the impulsive, short-duration signals generated by snapping shrimp. Between June 2011 and July 2012, a single hydrophone deployed within West Bay was programmed to record 60 or 30 seconds of acoustic data every 15 or 30 minutes. Envelope correlation and amplitude information were then used to count shrimp snaps within these recordings. The observed snap rates vary from 1500-2000 snaps per minute during summer to <100 snaps per minute during winter. Sound pressure levels are positively correlated with snap rate (r = 0.71-0.92 and vary seasonally by ~15 decibels in the 1.5-20 kHz range. Snap rates are positively correlated with water temperatures (r = 0.81-0.93, as well as potentially influenced by climate-driven changes in water quality. Light availability modulates snap rate on diurnal time scales, with most days exhibiting a significant preference for either nighttime or daytime snapping, and many showing additional crepuscular increases. During mid-summer, the number of snaps occurring at night is 5-10% more than predicted by a random model; however, this pattern is reversed between August and April, with an excess of up to 25% more snaps recorded during the day in the mid-winter. Diurnal variability in sound pressure levels is largest in the mid-winter, when the overall rate of snapping is at its lowest, and the percentage difference between daytime and nighttime activity is at its highest. This work highlights our lack of knowledge regarding the ecology and acoustic behavior of one of the most dominant soniforous invertebrate species in coastal systems. It also underscores the necessity of long-duration, high-temporal-resolution sampling in efforts to understand the bioacoustics of animal

  14. CREEK Project: RUI: the Role of Oyster Reefs in the Structure and Function of Tidal Creeks. A Project Overview: 1996-2000.

    Baruch Institute for Marine and Coastal Sciences, Univ of South Carolina — A group of eight tidal creeks dominated by oysters, Crassostrea virginica, in North Inlet, South Carolina, USA were studied using a replicated BACI (Before - After...

  15. The cost and feasibility of marine coastal restoration.

    Bayraktarov, Elisa; Saunders, Megan I; Abdullah, Sabah; Mills, Morena; Beher, Jutta; Possingham, Hugh P; Mumby, Peter J; Lovelock, Catherine E

    2016-06-01

    Land-use change in the coastal zone has led to worldwide degradation of marine coastal ecosystems and a loss of the goods and services they provide. Restoration is the process of assisting the recovery of an ecosystem that has been degraded, damaged, or destroyed and is critical for habitats where natural recovery is hindered. Uncertainties about restoration cost and feasibility can impede decisions on whether, what, how, where, and how much to restore. Here, we perform a synthesis of 235 studies with 954 observations from restoration or rehabilitation projects of coral reefs, seagrass, mangroves, salt-marshes, and oyster reefs worldwide, and evaluate cost, survival of restored organisms, project duration, area, and techniques applied. Findings showed that while the median and average reported costs for restoration of one hectare of marine coastal habitat were around US$80000 (2010) and US$1600000 (2010), respectively, the real total costs (median) are likely to be two to four times higher. Coral reefs and seagrass were among the most expensive ecosystems to restore. Mangrove restoration projects were typically the largest and the least expensive per hectare. Most marine coastal restoration projects were conducted in Australia, Europe, and USA, while total restoration costs were significantly (up to 30 times) cheaper in countries with developing economies. Community- or volunteer-based marine restoration projects usually have lower costs. Median survival of restored marine and coastal organisms, often assessed only within the first one to two years after restoration, was highest for saltmarshes (64.8%) and coral reefs (64.5%) and lowest for seagrass (38.0%). However, success rates reported in the scientific literature could be biased towards publishing successes rather than failures. The majority of restoration projects were short-lived and seldom reported monitoring costs. Restoration success depended primarily on the ecosystem, site selection, and techniques

  16. Post-mortem ecosystem engineering by oysters creates habitat for a rare marsh plant.

    Guo, Hongyu; Pennings, Steven C

    2012-11-01

    Oysters are ecosystem engineers in marine ecosystems, but the functions of oyster shell deposits in intertidal salt marshes are not well understood. The annual plant Suaeda linearis is associated with oyster shell deposits in Georgia salt marshes. We hypothesized that oyster shell deposits promoted the distribution of Suaeda linearis by engineering soil conditions unfavorable to dominant salt marsh plants of the region (the shrub Borrichia frutescens, the rush Juncus roemerianus, and the grass Spartina alterniflora). We tested this hypothesis using common garden pot experiments and field transplant experiments. Suaeda linearis thrived in Borrichia frutescens stands in the absence of neighbors, but was suppressed by Borrichia frutescens in the with-neighbor treatment, suggesting that Suaeda linearis was excluded from Borrichia frutescens stands by interspecific competition. Suaeda linearis plants all died in Juncus roemerianus and Spartina alterniflora stands, regardless of neighbor treatments, indicating that Suaeda linearis is excluded from these habitats by physical stress (likely water-logging). In contrast, Borrichia frutescens, Juncus roemerianus, and Spartina alterniflora all performed poorly in Suaeda linearis stands regardless of neighbor treatments, probably due to physical stresses such as low soil water content and low organic matter content. Thus, oyster shell deposits play an important ecosystem engineering role in influencing salt marsh plant communities by providing a unique niche for Suaeda linearis, which otherwise would be rare or absent in salt marshes in the southeastern US. Since the success of Suaeda linearis is linked to the success of oysters, efforts to protect and restore oyster reefs may also benefit salt marsh plant communities.

  17. Effect of severe hurricanes on biorock coral reef restoration projects in Grand Turk, Turks and Caicos Islands.

    Wells, Lucy; Perez, Fernando; Hibbert, Marlon; Clerveaux, Luc; Johnson, Jodi; Goreau, Thomas J

    2010-10-01

    Artificial reefs are often discouraged in shallow waters over concerns of storm damage to structures and surrounding habitat. Biorock coral reef restoration projects were initiated in waters around 5 m deep in Grand Turk, at Oasis (October 2006) and at Governor's Beach (November 2007). Hemi-cylindrical steel modules, 6m long were used, four modules at Oasis and six at Governor's Beach. Each project has over 1200 corals transplanted from sites with high sedimentation damage, and are regularly monitored for coral growth, mortality and fish populations. Corals show immediate growth over wires used to attach corals. Growth has been measured from photographs using a software program and is faster at Governor's Beach. After hurricanes Hanna and Ike (September 2008) the Governor's Beach structure was fully standing since the waves passed straight through with little damage, the Oasis structures which were tie-wired rather than welded had one module collapse (since been replaced with a new, welded structure). Hurricane Ike was the strongest hurricane on record to hit Grand Turk. Most cables were replaced following the hurricanes due to damage from debris and high wave action. The projects lost about a third of the corals due to hurricanes. Most of those lost had only been wired a few days before and had not yet attached themselves firmly. These projects have regenerated corals and fish populations in areas of barren sand or bedrock and are now attractive to snorkelers. High coral survival and low structural damage after hurricanes indicate that Biorock reef restoration can be effective in storm-impacted areas.

  18. Effect of severe hurricanes on Biorock Coral Reef Restoration Projects in Grand Turk, Turks and Caicos Islands

    Lucy Wells

    2010-10-01

    Full Text Available Artificial reefs are often discouraged in shallow waters over concerns of storm damage to structures and surrounding habitat. Biorock coral reef restoration projects were initiated in waters around 5m deep in Grand Turk, at Oasis (October 2006 and at Governor’s Beach (November 2007. Hemi-cylindrical steel modules, 6m long were used, four modules at Oasis and six at Governor’s Beach. Each project has over 1200 corals transplanted from sites with high sedimentation damage, and are regularly monitored for coral growth, mortality and fish populations. Corals show immediate growth over wires used to attach corals. Growth has been measured from photographs using a software program and is faster at Governor’s Beach. After hurricanes Hanna and Ike (September 2008 the Governor’s Beach structure was fully standing since the waves passed straight through with little damage, the Oasis structures which were tie-wired rather than welded had one module collapse (since been replaced with a new, welded structure. Hurricane Ike was the strongest hurricane on record to hit Grand Turk. Most cables were replaced following the hurricanes due to damage from debris and high wave action. The projects lost about a third of the corals due to hurricanes. Most of those lost had only been wired a few days before and had not yet attached themselves firmly. These projects have regenerated corals and fish populations in areas of barren sand or bedrock and are now attractive to snorkelers. High coral survival and low structural damage after hurricanes indicate that Biorock reef restoration can be effective in storm-impacted areas. Rev. Biol. Trop. 58 (Suppl. 3: 141-149. Epub 2010 October 01.

  19. Preliminary assessment of bioengineered fringing shoreline reefs in Grand Isle and Breton Sound, Louisiana

    La Peyre, Megan K.; Schwarting, Lindsay; Miller, Shea

    2013-01-01

    Restoration of three-dimensional shell habitats in coastal Louisiana presents a valuable and potentially self-sustaining approach to providing shoreline protection and critical nekton habitat and may contribute to water quality maintenance. The use of what has been called “living shorelines” is particularly promising because in addition to the hypothesized shoreline protection services, it is predicted that, if built and located in viable sites, these living shorelines may ultimately contribute to water quality maintenance through filtration of bivalves and may enhance nekton habitat. This approach, however, has not been tested extensively in different shallow water estuarine settings; understanding under what conditions a living shoreline must have to support a sustainable oyster population, and where these reefs may provide valuable shoreline protection, is key to ensuring that this approach provides an effective tool for coastal restoration. This project gathered preliminary data on the sustainability and shoreline stabilization of three large bioengineered fringing reefs located in Grand Isle, Lake Eloi, and Lake Fortuna, Louisiana. We collected preconstruction and postconstruction physiochemical and biological data by using a before-after-control-impact approach to evaluate the effectiveness of these living shoreline structures on reducing marsh erosion, enabling reef sustainability, and providing other ecosystem benefits. Although this project was originally designed to compare reef performance and impacts across three different locations over 2 years, delays in construction because of the Deepwater Horizon oil spill resulted in reefs being built from 12 to 18 months later than anticipated. As a result, monitoring postconstruction was severely limited. One reef, Grand Isle, was completed in March 2011 and monitored up to 18 months postcreation, whereas Lake Eloi and Lake Fortuna reefs were not completed until January 2012, and only 8 months of

  20. Mangrove oyster (Crassostrea rhizophorae (Guilding, 1928 farming areas as artificial reefs for fish: A case study in the State of Ceará, Brazil

    Luiz Eduardo Lima de Freitas

    2006-03-01

    Full Text Available A type of platform, known as a table, is now being used for mangrove oyster farming. In Fortim, Ceará, Brazil, this activity was begun in June 2000 and covers an area of 50 m² overlying a sand-clay substrate. The present study has the following main objectives: to identify and catalogue the ichthyofauna colonizing the Crassostrea rhizophorae farming platforms; to evaluate ecological aspects, such as the possible correlation between the physical and chemical variables for water quality and the occurrence of the ichthyofauna; and to observe the differences in the fish species found during tidal variations. Specimens were identified and quantified using the linear-transect, visual census methodology. The ichthyofauna observed comprised 3,030 individuals belonging to 28 species and 20 families. Of the 28 species found in the area studied, 14 were marine transients, 12 marine dependent, and only 2 permanent residents. A significant association was observed between the abundance of 11 species and the physical and chemical variables studied. Based on these results, it may be concluded that the platforms act as artificial reefs for the ichthyofauna, being colonized by at least 28 species, and providing protection from predators as well as a source of food and a reproductive substrate.Um tipo de plataforma, conhecido como mesas, estão sendo utilizadas para o cultivo de ostras. Em Fortim, Ceará, este cultivo teve início em junho de 2000 e abrange uma área total de 50m² sobre um substrato argilo-arenoso. A presente pesquisa tem como objetivo identificar e catalogar a ictiofauna colonizadora das mesas de cultivo de ostras do mangue (Crassostrea rhizophorae, avaliar aspectos ecológicos tais como as possíveis correlações de parâmetros físico-químicos da água com a ocorrência da ictiofauna, além de observar as diferenças na composição da mesma durante as variações de marés. Os exemplares foram identificados visualmente e quantificados

  1. CAN OYSTERS PLAY A ROLE IN ENVIRONMENTAL MANAGEMENT?

    The culinary and commercial value of oysters is widely recognized but, until recently, their ecological importance has been largely overlooked. Field and laboratory studies have begun to explore how filter-feeding and reef building by oysters can influence nutrient cycling, biodi...

  2. Japanese oysters in Dutch waters

    Berg, van den J.B.; Kozyreff, G.; Lin, H.X.; McDarby, J.; Peletier, M.A.; Planqué, R.; Wilson, P.L.

    2005-01-01

    Since the introduction of the Japanese oyster in the Eastern Scheldt it has spread into the Wadden Sea. This growth has a negative impact on the life of various other species in the sea. Seen from a mathematical viewpoint, the biological problem of how to restore the disturbed natural equilibrium

  3. Coral Reef Ecosystem Data from the 2010-2011 Kahekili Herbivore Fisheries Management Area, West Maui, Herbivore Enhancement as a Tool for Reef Restoration Project (NODC Accession 0082869)

    National Oceanic and Atmospheric Administration, Department of Commerce — This research targets the Hawaii Coral Reef Initiative (HCRI) Priority Area A: Kahekili, Maui: Herbivore Fisheries Management Area (KHFMA). The project goal was to...

  4. Water quality parameters and total aerobic bacterial and vibrionaceae loads in eastern oysters (Crassostrea virginica) from oyster gardening sites

    Oyster gardening is a practice designed to restore habitat for marine life and to improve water quality. This study determined physical and chemical water quality parameters at two oyster gardening sites in the Delaware Inland Bays and compared them with total aerobic bacteria and Vibrionaceae conc...

  5. A shell-neutral modeling approach yields sustainable oyster harvest estimates: a retrospective analysis of the Louisiana state primary seed grounds

    Soniat, Thomas M.; Klinck, John M.; Powell, Eric N.; Cooper, Nathan; Abdelguerfi, Mahdi; Hofmann, Eileen E.; Dahal, Janak; Tu, Shengru; Finigan, John; Eberline, Benjamin S.; La Peyre, Jerome F.; LaPeyre, Megan K.; Qaddoura, Fareed

    2012-01-01

    A numerical model is presented that defines a sustainability criterion as no net loss of shell, and calculates a sustainable harvest of seed (<75 mm) and sack or market oysters (≥75 mm). Stock assessments of the Primary State Seed Grounds conducted east of the Mississippi from 2009 to 2011 show a general trend toward decreasing abundance of sack and seed oysters. Retrospective simulations provide estimates of annual sustainable harvests. Comparisons of simulated sustainable harvests with actual harvests show a trend toward unsustainable harvests toward the end of the time series. Stock assessments combined with shell-neutral models can be used to estimate sustainable harvest and manage cultch through shell planting when actual harvest exceeds sustainable harvest. For exclusive restoration efforts (no fishing allowed), the model provides a metric for restoration success-namely, shell accretion. Oyster fisheries that remove shell versus reef restorations that promote shell accretion, although divergent in their goals, are convergent in their management; both require vigilant attention to shell budgets.

  6. Water Awareness Through Environmental Restoration

    Davis-Caldwell, K.

    2012-04-01

    and negative effects of human presence on the local and global water supply. Student research scientifically tested ways to slow down the effects of run-off contaminants. Students also revisit water analysis and plant trees as buffers as part of their stream preservation efforts in a culminating activity. Oyster Reef Restoration Project: As a result of changes in climate, pollution and human consumption, the oyster population in the Chesapeake Bay had previously been on a rapid decline. The Oyster Reef Restoration Project allows students to understand the creatures of the bay and the cause of this decline. They explore the domino effect this has had on the quality of the water in the bay and future implications on the environment when the oyster population fluctuates significantly. Students construct concrete reefs and study the components of its contents and the reef's impact on the bay. Students are responsible for mixing, pouring and preparing the reef for its eventual drop in the bay. Wetlands Recovery: Following the elimination of a substantial amount of the natural wetlands behind the elementary and middle schools, a wetlands area was erected on the school grounds. This pond has been used to learn about habitats and the role humans, plants and organisms play in the preservation of the earth soil and water supply. This wetland is used by both the elementary and middle schools as a place for hands-on inquiry based learning. Students maintain the upkeep of the pond and teach other students at lower grades.

  7. The Japanese alga Polysiphonia morrowii (Rhodomelaceae, Rhodophyta) on the South Atlantic Ocean: first report of an invasive macroalga inhabiting oyster reefs

    Croce, M. Emilia; Parodi, Elisa R.

    2014-06-01

    Conspicuous tufts of the filamentous algae Polysiphonia Greville inhabit the reefs of Crassostrea gigas on the Atlantic Patagonian coast. The population was recorded for the first time in 1994 and identified as P. argentinica. This study exhaustively investigated the morphology and reproduction of specimens and the seasonality of the population. The results revealed the identity of the specimens as the invasive Japanese macroalga Polysiphonia morrowii Harvey, on the basis of several striking features: the setaceous and tufted thalli, the corymbose growing apices, the endogenous axillary branches, the urceolate cystocarps and the sharply pointed branches. Sexual reproduction was evidenced; however, fertile male gametophytes were absent in the samples. The population was found almost all year round, but its abundance became higher in autumn and winter. The present study constitutes the first record of this invasive macroalga on the South Atlantic Ocean; the fourth record of an exotic macroalgal species on the Atlantic Patagonian coast; and the first record of an invasive species related to the establishment of C. gigas in Atlantic Patagonia.

  8. Oyster larvae settle in response to habitat-associated underwater sounds.

    Lillis, Ashlee; Eggleston, David B; Bohnenstiehl, DelWayne R

    2013-01-01

    Following a planktonic dispersal period of days to months, the larvae of benthic marine organisms must locate suitable seafloor habitat in which to settle and metamorphose. For animals that are sessile or sedentary as adults, settlement onto substrates that are adequate for survival and reproduction is particularly critical, yet represents a challenge since patchily distributed settlement sites may be difficult to find along a coast or within an estuary. Recent studies have demonstrated that the underwater soundscape, the distinct sounds that emanate from habitats and contain information about their biological and physical characteristics, may serve as broad-scale environmental cue for marine larvae to find satisfactory settlement sites. Here, we contrast the acoustic characteristics of oyster reef and off-reef soft bottoms, and investigate the effect of habitat-associated estuarine sound on the settlement patterns of an economically and ecologically important reef-building bivalve, the Eastern oyster (Crassostrea virginica). Subtidal oyster reefs in coastal North Carolina, USA show distinct acoustic signatures compared to adjacent off-reef soft bottom habitats, characterized by consistently higher levels of sound in the 1.5-20 kHz range. Manipulative laboratory playback experiments found increased settlement in larval oyster cultures exposed to oyster reef sound compared to unstructured soft bottom sound or no sound treatments. In field experiments, ambient reef sound produced higher levels of oyster settlement in larval cultures than did off-reef sound treatments. The results suggest that oyster larvae have the ability to respond to sounds indicative of optimal settlement sites, and this is the first evidence that habitat-related differences in estuarine sounds influence the settlement of a mollusk. Habitat-specific sound characteristics may represent an important settlement and habitat selection cue for estuarine invertebrates and could play a role in driving

  9. Oyster larvae settle in response to habitat-associated underwater sounds.

    Ashlee Lillis

    Full Text Available Following a planktonic dispersal period of days to months, the larvae of benthic marine organisms must locate suitable seafloor habitat in which to settle and metamorphose. For animals that are sessile or sedentary as adults, settlement onto substrates that are adequate for survival and reproduction is particularly critical, yet represents a challenge since patchily distributed settlement sites may be difficult to find along a coast or within an estuary. Recent studies have demonstrated that the underwater soundscape, the distinct sounds that emanate from habitats and contain information about their biological and physical characteristics, may serve as broad-scale environmental cue for marine larvae to find satisfactory settlement sites. Here, we contrast the acoustic characteristics of oyster reef and off-reef soft bottoms, and investigate the effect of habitat-associated estuarine sound on the settlement patterns of an economically and ecologically important reef-building bivalve, the Eastern oyster (Crassostrea virginica. Subtidal oyster reefs in coastal North Carolina, USA show distinct acoustic signatures compared to adjacent off-reef soft bottom habitats, characterized by consistently higher levels of sound in the 1.5-20 kHz range. Manipulative laboratory playback experiments found increased settlement in larval oyster cultures exposed to oyster reef sound compared to unstructured soft bottom sound or no sound treatments. In field experiments, ambient reef sound produced higher levels of oyster settlement in larval cultures than did off-reef sound treatments. The results suggest that oyster larvae have the ability to respond to sounds indicative of optimal settlement sites, and this is the first evidence that habitat-related differences in estuarine sounds influence the settlement of a mollusk. Habitat-specific sound characteristics may represent an important settlement and habitat selection cue for estuarine invertebrates and could play a

  10. A Global Synthesis Reveals Gaps in Coastal Habitat Restoration Research

    Y. Stacy Zhang

    2018-04-01

    Full Text Available Coastal ecosystems have drastically declined in coverage and condition across the globe. To combat these losses, marine conservation has recently employed habitat restoration as a strategy to enhance depleted coastal ecosystems. For restoration to be a successful enterprise, however, it is necessary to identify and address potential knowledge gaps and review whether the field has tracked scientific advances regarding best practices. This enables managers, researchers, and practitioners alike to more readily establish restoration priorities and goals. We synthesized the peer-reviewed, published literature on habitat restoration research in salt marshes, oyster reefs, and seagrasses to address three questions related to restoration efforts: (i How frequent is cross-sector authorship in coastal restoration research? (ii What is the geographic distribution of coastal restoration research? and (iii Are abiotic and biotic factors equally emphasized in the literature, and how does this vary with time? Our vote-count survey indicated that one-third of the journal-published studies listed authors from at least two sectors, and 6% listed authors from all three sectors. Across all habitat types, there was a dearth of studies from Africa, Asia, and South America. Finally, despite many experimental studies demonstrating that species interactions can greatly affect the recovery and persistence of coastal foundation species, only one-fourth of the studies we examined discussed their effects on restoration. Combined, our results reveal gaps and discrepancies in restoration research that should be addressed in order to further propel coastal restoration science.

  11. Characterization of adhesive from oysters: A structural and compositional study

    Alberts, Erik

    The inability for man-made adhesives to set in wet or humid environments is an ongoing challenging the design of biomedical and marine adhesive materials. However, we see that nature has already overcome this challenge. Mussels, barnacles, oysters and sandcastle worms all have unique mechanisms by which they attach themselves to surfaces. By understanding what evolution has already spent millions of years perfecting, we can design novel adhesive materials inspired by nature's elegant designs. The well-studied mussel is currently the standard for design of marine inspired biomimetic polymers. In the work presented here, we aim to provide new insights into the adhesive produced by the eastern oyster, Crassostrea virginica. Unlike the mussel, which produces thread-like plaques comprised of DOPA containing-protein, the oyster secretes an organic-inorganic hybrid adhesive as it settles and grows onto a surface. This form of adhesion renders the oyster to be permanently fixed in place. Over time, hundreds of thousands of oyster grow and agglomerate to form extensive reef structures. These reefs are not only essential to survival of the oyster, but are also vital to intertidal ecosystems. While the shell of the oyster has been extensively studied, curiously, only a few conflicting insights have been made into the nature of the adhesive and contact zone between shell and substrate, and even lesfs information has been ascertained on organic and inorganic composition. In this work, we provide microscopy and histochemical studies to characterize the structure and composition of the adhesive, using oyster in the adult and juvenile stages of life. Preliminary work on extracting and characterizing organic components through collaborative help with solid-state NMR (SSNMR) and proteomics are also detailed here. We aim to provide a full, comprehensive characterization of oyster adhesive so that in the future, we may apply what we learn to the design of new materials.

  12. Niche dimension differs among life-history stages of Pacific oysters in intertidal environments

    Walles, B.; Smaal, A.C.; Herman, P.M.J.; Ysebaert, T.

    2016-01-01

    Structure-building, autogenic ecosystem engineers are recognized worldwide as potential tools for coastal protection, which depends on long-term sustainability and persistence of their structures. For reef-building oysters, reefs are maintained through accumulation of shell material, which depends

  13. Niche dimension differs among life-history stages of Pacific oysters in intertidal environments

    Walles, Brenda; Smaal, Aad C.; Herman, Peter M.J.; Ysebaert, Tom

    2016-01-01

    Structure-building, autogenic ecosystem engineers are recognized worldwide as potential tools for coastal protection, which depends on long-term sustainability and persistence of their structures. For reef-building oysters, reefs are maintained through accumulation of shell material, which

  14. Oysters and Vibriosis

    ... this? Submit What's this? Submit Button Past Emails Oysters and Vibriosis Language: English (US) Español (Spanish) Recommend ... is to cook them properly. Tips for Cooking Oysters & Other Shellfish Before cooking, throw out any shellfish ...

  15. Reversal of ocean acidification enhances net coral reef calcification.

    Albright, Rebecca; Caldeira, Lilian; Hosfelt, Jessica; Kwiatkowski, Lester; Maclaren, Jana K; Mason, Benjamin M; Nebuchina, Yana; Ninokawa, Aaron; Pongratz, Julia; Ricke, Katharine L; Rivlin, Tanya; Schneider, Kenneth; Sesboüé, Marine; Shamberger, Kathryn; Silverman, Jacob; Wolfe, Kennedy; Zhu, Kai; Caldeira, Ken

    2016-03-17

    Approximately one-quarter of the anthropogenic carbon dioxide released into the atmosphere each year is absorbed by the global oceans, causing measurable declines in surface ocean pH, carbonate ion concentration ([CO3(2-)]), and saturation state of carbonate minerals (Ω). This process, referred to as ocean acidification, represents a major threat to marine ecosystems, in particular marine calcifiers such as oysters, crabs, and corals. Laboratory and field studies have shown that calcification rates of many organisms decrease with declining pH, [CO3(2-)], and Ω. Coral reefs are widely regarded as one of the most vulnerable marine ecosystems to ocean acidification, in part because the very architecture of the ecosystem is reliant on carbonate-secreting organisms. Acidification-induced reductions in calcification are projected to shift coral reefs from a state of net accretion to one of net dissolution this century. While retrospective studies show large-scale declines in coral, and community, calcification over recent decades, determining the contribution of ocean acidification to these changes is difficult, if not impossible, owing to the confounding effects of other environmental factors such as temperature. Here we quantify the net calcification response of a coral reef flat to alkalinity enrichment, and show that, when ocean chemistry is restored closer to pre-industrial conditions, net community calcification increases. In providing results from the first seawater chemistry manipulation experiment of a natural coral reef community, we provide evidence that net community calcification is depressed compared with values expected for pre-industrial conditions, indicating that ocean acidification may already be impairing coral reef growth.

  16. 78 FR 62293 - Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY

    2013-10-15

    ... Safety Zone, Oyster Festival 30th Anniversary Fireworks Display, Oyster Bay; Oyster Bay, NY AGENCY: Coast... zone on the navigable waters of Oyster Bay near Oyster Bay, NY for the Oyster Festival 30th Anniversary... Oyster Festival 30th Anniversary Fireworks Display is scheduled for October 19, 2013 and is one of...

  17. 21 CFR 161.136 - Olympia oysters.

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Olympia oysters. 161.136 Section 161.136 Food and... oysters. Olympia oysters, raw Olympia oysters, shucked Olympia oysters, are of the species Ostrea lurida and conform to the definition and standard of identity prescribed for oysters in § 161.130. ...

  18. Oyster radiation sensitivity

    Marchese, Sandra R.M.; Mastro, Nelida L. del

    1996-01-01

    Various food products like oysters, crabs and shrimps have been described as possible Vibrio spp. transmitting agents. Seafood irradiation is been presented as an alternative among the different public health intervention measures to control food borne diseases. The objective of this work was to establish, firstly, the radioresistance of Crassostrea brasiliana oysters. The oysters were irradiated with Co-60 radiation with doses of 0, 1.5,3 and 6 kGy. Survival curves a function of time showed that 100% of samples irradiated with 3 kGy survived at least 6 days; among those irradiated with 6 kGy, 100% survived 3 days. These results are encouraging since a dose of 2 kGy is already effective in diminishing oyster bioburden. (author)

  19. Analysis of dissolved oxygen stress in oysters in Mobile Bay from 2010-05-26 to 1010-09-21 (NODC Accession 0125573)

    National Oceanic and Atmospheric Administration, Department of Commerce — Hatchery-reared adult and juvenile oysters were placed at 0.1 m and 1.0 m above bottom at Sand Reef and Denton Reef, Mobile Bay, Alabama between May 26 and Sep 21,...

  20. Reef Development on Artificial Patch Reefs in Shallow Water of Panjang Island, Central Java

    Munasik; Sugiyanto; Sugianto, Denny N.; Sabdono, Agus

    2018-02-01

    Reef restoration methods are generally developed by propagation of coral fragments, coral recruits and provide substrate for coral attachment using artificial reefs (ARs). ARs have been widely applied as a tool for reef restoration in degraded natural reefs. Successful of coral restoration is determined by reef development such as increasing coral biomass, natural of coral recruits and fauna associated. Artificial Patch Reefs (APRs) is designed by combined of artificial reefs and coral transplantation and constructed by modular circular structures in shape, were deployed from small boats by scuba divers, and are suitable near natural reefs for shallow water with low visibility of Panjang Island, Central Java. Branching corals of Acropora aspera, Montipora digitata and Porites cylindrica fragments were transplanted on to each module of two units of artificial patch reefs in different periods. Coral fragments of Acropora evolved high survival and high growth, Porites fragments have moderate survival and low growth, while fragment of Montipora show in low survival and moderate growth. Within 19 to 22 months of APRs deployment, scleractinian corals were recruited on the surface of artificial patch reef substrates. The most recruits abundant was Montastrea, followed by Poritids, Pocilloporids, and Acroporids. We conclude that artificial patch reefs with developed by coral fragments and natural coral recruitment is one of an alternative rehabilitation method in shallow reef with low visibility.

  1. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract, at the M/V ELPIS Restoration Site, 2006 - 2007 (NODC Accession 0039899)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  2. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract at the M/V Alec Owen Maitland restoration site, 2006 - 2007 (NODC Accession 0039987)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  3. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract at the M/V Alec Owen Maitland restoration site, 2004 - 2006 (NODC Accession 0010585)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  4. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract, at the M/V ELPIS Restoration Site, 2004 - 2006 (NODC Accession 0010576)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  5. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract at the M/V Alec Owen Maitland Restoration site, 2006 - 2007 (NODC Accession 0039987)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  6. Continuous bottom temperature measurements in strategic areas of the Florida Reef Tract at M/V ELPIS Restoration Site, 2007 - 2011 (NODC Accession 0093024)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to document bottom seawater temperature in strategic areas of the Florida Reef Tract on a continuing basis and make that information...

  7. Top-down control of phytoplankton by oysters in Chesapeake Bay, USA: Comment on Pomeroy et al. (2006)

    Pomeroy et al. (2006) proposed that temporal and spatial mismatches between eastern oyster filtration and phytoplankton abundance will preclude restored stocks of eastern oysters from reducing the severity of hypoxia in the deep channel of central Chesapeake Bay. We refute this c...

  8. Investigating the Role of Oysters in Altering Net N2 Fluxes Using Novel In-Situ Experimental Design

    Coastal nutrient over-enrichment represents one of the most pressing environmental management issues faced worldwide. Oyster aquaculture and restoration are hypothesized to mitigate excessive nitrogen (N) loads via increasing benthic denitrification rates in coastal systems. Howe...

  9. The American Oyster.

    Thompson, Nancy E.

    The Maryland Marine Science Education Project has produced a series of mini-units in marine science education for the junior high/middle school classroom. This unit focuses on the American oyster. Although the unit specifically treats the Chesapeake Bay, it may be adapted for use with similar estuarine systems. In addition, the unit may be…

  10. Putting oysters under pressure

    High pressure processing (HPP) is the most commercially important food processing technology in use now and is anticipated to remain of equal or greater importance during the next five to 10 years. This month’s column reviews the theory and current applications of HPP for oysters to improve their sa...

  11. Oyster Fauna of Thailand

    Bussarawit, Somchai; Cedhagen, Tomas

    2012-01-01

    Here, we describe 16 species of true oysters from Thai waters. They are widely distributed on various intertidal and subtidal substrates in the Gulf of Thailand and in the Andaman Sea. The different species were identified on the basis of their shell morphology, and their characteristic features...

  12. Dangerous Raw Oysters

    2013-08-05

    Dr. Duc Vugia, chief of the Infectious Diseases Branch at the California Department of Public Health, discusses the dangers of eating raw oysters.  Created: 8/5/2013 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 8/7/2013.

  13. Neuropeptides encoded by the genomes of the Akoya pearl oyster Pinctata fucata and Pacific oyster Crassostrea gigas: a bioinformatic and peptidomic survey.

    Stewart, Michael J; Favrel, Pascal; Rotgans, Bronwyn A; Wang, Tianfang; Zhao, Min; Sohail, Manzar; O'Connor, Wayne A; Elizur, Abigail; Henry, Joel; Cummins, Scott F

    2014-10-02

    Oysters impart significant socio-ecological benefits from primary production of food supply, to estuarine ecosystems via reduction of water column nutrients, plankton and seston biomass. Little though is known at the molecular level of what genes are responsible for how oysters reproduce, filter nutrients, survive stressful physiological events and form reef communities. Neuropeptides represent a diverse class of chemical messengers, instrumental in orchestrating these complex physiological events in other species. By a combination of in silico data mining and peptide analysis of ganglia, 74 putative neuropeptide genes were identified from genome and transcriptome databases of the Akoya pearl oyster, Pinctata fucata and the Pacific oyster, Crassostrea gigas, encoding precursors for over 300 predicted bioactive peptide products, including three newly identified neuropeptide precursors PFGx8amide, RxIamide and Wx3Yamide. Our findings also include a gene for the gonadotropin-releasing hormone (GnRH) and two egg-laying hormones (ELH) which were identified from both oysters. Multiple sequence alignments and phylogenetic analysis supports similar global organization of these mature peptides. Computer-based peptide modeling of the molecular tertiary structures of ELH highlights the structural homologies within ELH family, which may facilitate ELH activity leading to the release of gametes. Our analysis demonstrates that oysters possess conserved molluscan neuropeptide domains and overall precursor organization whilst highlighting many previously unrecognized bivalve idiosyncrasies. This genomic analysis provides a solid foundation from which further studies aimed at the functional characterization of these molluscan neuropeptides can be conducted to further stimulate advances in understanding the ecology and cultivation of oysters.

  14. Artificial Reefs

    National Oceanic and Atmospheric Administration, Department of Commerce — An artificial reef is a human-made underwater structure, typically built to promote marine life in areas with a generally featureless bottom, control erosion, block...

  15. Developing tools for the study of molluscan immunity: The sequencing of the genome of the eastern oyster, Crassostrea virginica.

    Gómez-Chiarri, Marta; Warren, Wesley C; Guo, Ximing; Proestou, Dina

    2015-09-01

    The eastern oyster, Crassostrea virginica, provides important ecological and economical services, making it the target of restoration projects and supporting a significant fishery/aquaculture industry with landings valued at more than $100 million in 2012 in the United States of America. Due to the impact of infectious diseases on wild, restored, and cultured populations, the eastern oyster has been the focus of studies on host-pathogen interactions and immunity, as well as the target of selective breeding efforts for disease resistant oyster lines. Despite these efforts, relatively little is known about the genetic basis of resistance to diseases or environmental stress, not only in eastern oyster, but also in other molluscan species of commercial interest worldwide. In order to develop tools and resources to assist in the elucidation of the genomic basis of traits of commercial, biological, and ecological interest in oysters, a team of genome and bioinformatics experts, in collaboration with the oyster research community, is sequencing, assembling, and annotating the first reference genome for the eastern oyster and producing an exhaustive transcriptome from a variety of oyster developmental stages and tissues in response to a diverse set of environmentally-relevant stimuli. These transcriptomes and reference genome for the eastern oyster, added to the already available genome and transcriptomes for the Pacific oyster (Crassostrea gigas) and other bivalve species, will be an essential resource for the discovery of candidate genes and markers associated with traits of commercial, biological, and ecologic importance in bivalve molluscs, including those related to host-pathogen interactions and immunity. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Project O.R.B (Operation Reef Ball): Creating Artificial Reefs, Educating the Community

    Phipps, A.

    2012-04-01

    The Project O.R.B. (Operation Reef Ball) team at South Plantation High School's Everglades Restoration & Environmental Science Magnet Program is trying to help our ailing south Florida coral reefs by constructing, deploying, and monitoring designed artificial reefs. Students partnered with the Reef Ball Foundation, local concrete companies, state parks, Girl Scouts, Sea Scouts, local universities and environmental agencies to construct concrete reef balls, each weighing approximately 500 lbs (227 kg). Students then deployed two artificial reefs consisting of over 30 concrete reef balls in two sites previously permitted for artificial reef deployment. One artificial reef was placed approximately 1.5 miles (2.4 km) offshore of Golden Beach in Miami-Dade County with the assistance of Florida Atlantic University and their research vessel. A twin reef was deployed at the mouth of the river in Oleta River State Park in Miami. Monitoring and maintenance of the sites is ongoing with semi-annual reports due to the Reef Ball Foundation and DERM (Department of Environmental Resource Management) of Miami-Dade County. A second goal of Project O.R.B. is aligned with the Florida Local Action Strategy, the Southeast Florida Coral Reef Initiative, and the U.S. Coral Reef Task Force, all of which point out the importance of awareness and education as key components to the health of our coral reefs. Project O.R.B. team members developed and published an activity book targeting elementary school students. Outreach events incorporate cascade learning where high school students teach elementary and middle school students about various aspects of coral reefs through interactive "edu-tainment" modules. Attendees learn about water sampling, salinity, beach erosion, surface runoff, water cycle, ocean zones, anatomy of coral, human impact on corals, and characteristics of a well-designed artificial reef. Middle school students snorkel on the artificial reef to witness first-hand the success

  17. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN ...

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inhabitants of coral reefs. The objective of the CWA is to restore and maintain the chemical, physical and biological integrity of water resources. Coral reef protection and restoration under the Clean Water Act begins with water quality standards - provisions of state or Federal law that consist of a designated use(s) for the waters of the United States and water quality criteria sufficient to protect the uses. Aquatic life use is the designated use that is measured by biological criteria (biocriteria). Biocriteria are expectations set by a jurisdiction for the quality and quantity of living aquatic resources in a defined waterbody. Biocriteria are an important addition to existing management tools for coral reef ecosystems. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework to aid States and Territories in their development, adoption, and implementation of coral reef biocriteria in their respective water quality standards. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework for coral re

  18. Effects of a bio-invasion of the Pacific oyster, Crassostrea gigas (Thunberg, 1793) in five shallow water habitats in Scandinavia

    Mortensen, Stein; Bodvin, Torjan; Strand, Åsa

    2017-01-01

    Management of invasive species is addressed in both national and international regulations regarding the protection of marine habitats and biodiversity and in regulations of aquaculture. The geographical range of the invasive Pacific oyster, Crassostrea gigas, is expanding, both through human...... mediated vectors and by natural dispersal. The species is now spreading in Scandinavia. In order to optimize the management of the oyster, including targeted monitoring and mitigation activities, knowledge on the present and future distribution and impact on the ecosystem is important. The development...... of habitats where Pacific oysters are found in Scandinavia (Low energy rock, Littoral sand and mudflats, Littoral biogenic reefs, Sublittoral sand and Sublittoral biogenic reefs) to a predicted development, thereafter assessed in relation to impact on the habitats. The assessment was done as a function...

  19. Vaal Reefs

    Anon.

    1983-01-01

    Vaal Reefs Mine, the world's top gold producer with an output last quarter of 19,6 tons of gold, is to expand further with the building of an 120 000t/month run-of-mine mill at the new No 9 Shaft in the south area, linked with a carbon-in-pulp plant

  20. 7 CFR 701.54 - Oysters.

    2010-01-01

    ... 7 Agriculture 7 2010-01-01 2010-01-01 false Oysters. 701.54 Section 701.54 Agriculture Regulations... ADMINISTERED UNDER THIS PART § 701.54 Oysters. (a) Notwithstanding § 701.5(b), but otherwise subject to the... be made available under this section for the eligible cost of refurbishing public or private oyster...

  1. The Ecological Role of Sharks on Coral Reefs.

    Roff, George; Doropoulos, Christopher; Rogers, Alice; Bozec, Yves-Marie; Krueck, Nils C; Aurellado, Eleanor; Priest, Mark; Birrell, Chico; Mumby, Peter J

    2016-05-01

    Sharks are considered the apex predator of coral reefs, but the consequences of their global depletion are uncertain. Here we explore the ecological roles of sharks on coral reefs and, conversely, the importance of reefs for sharks. We find that most reef-associated shark species do not act as apex predators but instead function as mesopredators along with a diverse group of reef fish. While sharks perform important direct and indirect ecological roles, the evidence to support hypothesised shark-driven trophic cascades that benefit corals is weak and equivocal. Coral reefs provide some functional benefits to sharks, but sharks do not appear to favour healthier reef environments. Restoring populations of sharks is important and can yet deliver ecological surprise. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. USING RESPONSES OF OYSTERS IN ESTABLISHING MINIMUM FLOWS AND LEVELS IN THE CALOOSAHATCHEE ESTUARY, FLORIDA

    Volety, Aswani K., S. Gregory Tolley and James T. Winstead. 2002. Using Responses of Oysters in Establishing Minimum Flows and Levels in the Caloosahatchee Estuary, Florida (Abstract). Presented at the 6th International Conference on Shellfish Restoration, 20-24 November 2002, Ch...

  3. The contribution of microbial biotechnology to mitigating coral reef degradation.

    Damjanovic, Katarina; Blackall, Linda L; Webster, Nicole S; van Oppen, Madeleine J H

    2017-09-01

    The decline of coral reefs due to anthropogenic disturbances is having devastating impacts on biodiversity and ecosystem services. Here we highlight the potential and challenges of microbial manipulation strategies to enhance coral tolerance to stress and contribute to coral reef restoration and protection. © 2017 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  4. Effect of branding Gulf oysters on consumers willingness to pay

    Acquah, Sarah; Petrolia, Daniel

    2014-01-01

    Using a choice experiment this study found that raw oyster consumers are more likely to buy oysters harvested from their region over those harvested outside the region. Consumers are more likely to buy wild-caught oysters over cultivated oysters. Non-Gulf consumers are more likely to buy medium or large size oysters over small size.

  5. Persistence of Caliciviruses in Artificially Contaminated Oysters during Depuration▿

    Ueki, You; Shoji, Mika; Suto, Atsushi; Tanabe, Toru; Okimura, Yoko; Kikuchi, Yoshihiko; Saito, Noriyuki; Sano, Daisuke; Omura, Tatsuo

    2007-01-01

    The fate of calicivirus in oysters in a 10-day depuration was assessed. The norovirus gene was persistently detected from artificially contaminated oysters during the depuration, whereas feline calicivirus in oysters was promptly eliminated. The prolonged observation of norovirus in oysters implies the existence of a selective retention mechanism for norovirus within oysters.

  6. Ostreid herpesvirus OsHV-1 μVar in Pacific oysters Crassostrea gigas (Thunberg 1793) of the Wadden Sea, a UNESCO world heritage site.

    Gittenberger, A; Voorbergen-Laarman, M A; Engelsma, M Y

    2016-01-01

    The Wadden Sea is an extensive wetland area, recognized as UNESCO world heritage site of international importance. Since the mid-1990s, the invasive Pacific oyster Crassostrea gigas (Thunberg 1793) population in the area has grown exponentially, having a distinct impact on the ecosystem. The recent spread of the emerging oyster pathogen Ostreid herpesvirus OsHV-1 μVar worldwide and specifically in the oyster culture areas in the south of the Netherlands raised the question whether the virus may also be present in the Wadden Sea. In the summer of 2012 juvenile Pacific oysters were collected from five locations in the Dutch Wadden Sea. The virus was shown to be present in three of the five locations by real-time PCR and sequencing. It was concluded that OsHV-1 μVar has settled itself in Pacific oyster reefs in the Wadden Sea. These results and the recent discoveries of OsHV-1 microvariants in Australia and Korea indicate that OsHV-1 μVar and related variants might be more widespread than can be deduced from current literature. In particular in regions with no commercial oyster culture, similar to the Wadden Sea, the virus may go undetected as wild beds with mixed age classes hamper the detection of mortality among juvenile oysters. © 2015 John Wiley & Sons Ltd.

  7. Anthropogenic mortality on coral reefs in Caribbean Panama predates coral disease and bleaching.

    Cramer, Katie L; Jackson, Jeremy B C; Angioletti, Christopher V; Leonard-Pingel, Jill; Guilderson, Thomas P

    2012-06-01

    Caribbean reef corals have declined precipitously since the 1980s due to regional episodes of bleaching, disease and algal overgrowth, but the extent of earlier degradation due to localised historical disturbances such as land clearing and overfishing remains unresolved. We analysed coral and molluscan fossil assemblages from reefs near Bocas del Toro, Panama to construct a timeline of ecological change from the 19th century-present. We report large changes before 1960 in coastal lagoons coincident with extensive deforestation, and after 1960 on offshore reefs. Striking changes include the demise of previously dominant staghorn coral Acropora cervicornis and oyster Dendrostrea frons that lives attached to gorgonians and staghorn corals. Reductions in bivalve size and simplification of gastropod trophic structure further implicate increasing environmental stress on reefs. Our paleoecological data strongly support the hypothesis, from extensive qualitative data, that Caribbean reef degradation predates coral bleaching and disease outbreaks linked to anthropogenic climate change. © 2012 Blackwell Publishing Ltd/CNRS.

  8. The effectiveness of coral reefs for coastal hazard risk reduction and adaptation

    Ferrario, Filippo; Beck, Michael W.; Storlazzi, Curt D.; Micheli, Fiorenza; Shepard, Christine C.; Airoldi, Laura

    2014-01-01

    The world’s coastal zones are experiencing rapid development and an increase in storms and flooding. These hazards put coastal communities at heightened risk, which may increase with habitat loss. Here we analyse globally the role and cost effectiveness of coral reefs in risk reduction. Meta-analyses reveal that coral reefs provide substantial protection against natural hazards by reducing wave energy by an average of 97%. Reef crests alone dissipate most of this energy (86%). There are 100 million or more people who may receive risk reduction benefits from reefs or bear hazard mitigation and adaptation costs if reefs are degraded. We show that coral reefs can provide comparable wave attenuation benefits to artificial defences such as breakwaters, and reef defences can be enhanced cost effectively. Reefs face growing threats yet there is opportunity to guide adaptation and hazard mitigation investments towards reef restoration to strengthen this first line of coastal defence.

  9. Metal leaching from experimental coal fly-ash oyster cultch

    Homziak, J.; Bennett, L.; Simon, P.; Herring, R. (Mississippi State University, MS (USA). Coastal Research and Extension Center)

    1993-08-01

    Because oysters accumulate metals far in excess of ambient concentrations potential leaching and bioaccumulation of metals may be important public health concerns where ash-cement aggregates are being considered for oyster cultivation. This study examined the potential for metal release from an ash-cement aggregate proposed for use in oyster reef construction in Mississippi coastal waters. Seven acid-washed aquaria were each filled with 77L of artificial seawater. Five randomly selected aquaria each received 8.6 L of aggregate pellets. Samples were taken from each aquarium one hour after the start of the experiment and at 10 day intervals on six subsequent sampling dates. The samples were analysed for arsenic, cadmium, chromium, copper, iron, lead, manganese, mercury, nickel, selenium and zinc. Cadmium, iron and mercury were essentially not detected in the treatment aquaria. Except for chromium, the mean concentrations of metals in the treatment samples were generally less than 10 ppb. An overall comparison of the concentrations of 8 metals among all aquaria and sampling dates detected significant differences in the concentration of chromium (p[lt]0.001), manganese (p[lt]0.05) and selenium (p[lt]0.001). Treatment aquaria had significantly greater concentrations of chromium and selenium than did either control (nonparametric multiple comparison, p[lt]0.05). Most of the chromium found in the treatment aquaria was the hexavalent form (means range from 0.052 to 1.328 ppm). Treatment hexavalent chromium concentrations increased over time. 14 refs., 1 fig., 2 tabs.

  10. Japanese oysters in Dutch waters

    Berg, van den J.B.; Kozyreff, G.; Lin, H.X.; McDarby, J.; Peletier, M.A.; Planqué, R.; Wilson, P.L.; Pik, D.; Rottschäfer, V.

    2004-01-01

    We study a number of aspects of the colonisation of the Eastern Scheldt by the Japanese Oyster. We formulate and analyse some simple models of the spatial spreading, and determine a rough dependence of the spreading behaviour on parameters. We examine the suggestion of reducing salinity by opening

  11. Calculation of Oyster Benefits with a Bioenergetics Model of the Virginia Oyster

    2014-11-01

    soft tissue, and reproduction. Inorganic carbon incorporated into shell CaCO3 is considered separately. The organic carbon sequestered in biomass ...oyster biomass (dry tissue weight); • oyster age vs. shell length; • standing stock (population and biomass ); • shell accretion rates; • age...that found use in model parameterization and validation included: • individual oyster biomass (dry tissue weight); • oyster age vs. shell length

  12. High pressure inactivation of HAV within oysters: comparison of shucked oysters with whole in shell meats

    High pressure inactivation of hepatitis A virus (HAV) within oysters bioaccumulated under simulated natural conditions to levels >106 PFU/oyster has been evaluated. Five min treatments at 20C were administered at 350, 375, and 400 MegaPascals (MPa). Shucked and whole-in-shell oysters were directly...

  13. Composted oyster shell as lime fertilizer is more effective than fresh oyster shell.

    Lee, Young Han; Islam, Shah Md Asraful; Hong, Sun Joo; Cho, Kye Man; Math, Renukaradhya K; Heo, Jae Young; Kim, Hoon; Yun, Han Dae

    2010-01-01

    Physio-chemical changes in oyster shell were examined, and fresh and composted oyster shell meals were compared as lime fertilizers in soybean cultivation. Structural changes in oyster shell were observed by AFM and FE-SEM. We found that grains of the oyster shell surface became smoother and smaller over time. FT-IR analysis indicated the degradation of a chitin-like compound of oyster shell. In chemical analysis, pH (12.3+/-0.24), electrical conductivity (4.1+/-0.24 dS m(-1)), and alkaline powder (53.3+/-1.12%) were highest in commercial lime. Besides, pH was higher in composted oyster shell meal (9.9+/-0.53) than in fresh oyster shell meal (8.4+/-0.32). The highest organic matter (1.1+/-0.08%), NaCl (0.54+/-0.03%), and moisture (15.1+/-1.95%) contents were found in fresh oyster shell meal. A significant higher yield of soybean (1.33 t ha(-1)) was obtained by applying composted oyster shell meal (a 21% higher yield than with fresh oyster shell meal). Thus composting of oyster shell increases the utility of oyster shell as a liming material for crop cultivation.

  14. Noroviruses in oysters from local markets and oyster farms in southern Thailand.

    Kittigul, Leera; Pombubpa, Kannika; Sukonthalux, Suntharee; Rattanatham, Tippawan; Utrarachkij, Fuangfa

    2011-01-01

    One hundred and eighteen oyster samples collected from local markets and oyster farms in southern Thailand were examined for noroviruses (NoVs) and bacterial indicators of fecal contamination (fecal coliforms and Escherichia coli). Using a virus concentration procedure followed by RT-nested PCR, NoVs were detected in 38% of the samples. Oysters collected from oyster farms were found with NoVs at a higher detection rate (25/53 samples) than oysters from local markets (20/65 samples). Of the 45 NoV-positive oyster samples, 67% belonged to NoV genogroup I (GI), 15% to GII, and 18% to both GI and GII. DNA sequencing showed that 2 NoVs belonged to NoV GI-2 genotype. Fecal coliforms in NoV-positive oyster samples were in the range of oyster samples contained fecal coliforms within the standard acceptable level of raw shellfish (oyster samples were within acceptable levels of E. coli contamination (oysters obtained from both markets and oyster farms might pose a potential risk of acute gastroenteritis associated with raw oyster consumption. Examination for both fecal bacterial indicators and enteric viruses should be conducted for microbiological food safety of shellfish.

  15. Measuring Macrobenthos Biodiversity at Oyster Aquaculture Sites in the Delaware Inland Bays

    Fuoco, M. J.; Ozbay, G.

    2016-12-01

    The Delaware Inland Bays consists of three shallow coastal bays located in the southern portion of Delaware. Anthropogenic activities have led to the degradation of water quality, because the bays are surrounded by highly developed areas and have low flushing rates. This results in loss of biodiversity and abundance of organisms. Ongoing degradation of the bays has led to a dramatic decline in local oyster populations since the late 1800s. Oysters are keystone species, which provide habitats for organisms and help to improve water quality. This study aims to find if the introduction of oyster aquaculture improves local biodiversity and abundance of macrobenthos. The study was conducted in Rehoboth Bay, Indian River Bay and Little Assawoman Bay. Aquaculture gear was placed at one location in each of the bays and 24 sediment core samples were taken once a month. From these core samples all worms were fixed and stained in a 10% Formalin Rose Bengal solution and preserved in 70% Ethanol for later identification. Stable carbon and nitrogen isotope analysis of oyster tissue will also be performed to assess the health of the bay. The goals of this research are to better understand the role of oyster aquaculture in restoring the viability and health of the Delaware Inland Bays.

  16. Pacific oyster culture in British Columbia

    Quayle, D. B; Quayle, Daniel Branch

    1988-01-01

    .... Harvesting, processing, and storage methods are described. The problems of Pacific oyster culture include industrial and sewage pollution, paralytic shellfish poisoning along with predators and disease...

  17. The hot oyster: levels of virulent Vibrio parahaemolyticus strains in individual oysters.

    Klein, Savannah L; Lovell, Charles R

    2017-02-01

    Vibrio parahaemolyticus is the leading cause of seafood-associated gastroenteritis and is most commonly transmitted by raw oysters. Consequently, detection of virulent strains of this organism in oysters is a primary concern for seafood safety. Vibrio parahaemolyticus levels were determined in 110 individual oysters harvested from two sampling sites in SC, USA. The majority of oysters (98%) contained low levels of presumptive V. parahaemolyticus However, two healthy oysters contained presumptive V. parahaemolyticus numbers that were unusually high. These two 'hot' oysters contained levels of presumptive V. parahaemolyticus within the gills that were ∼100-fold higher than the average for other oysters collected at the same date and location. Current V. parahaemolyticus detection practices require homogenizing a dozen oysters pooled together to determine V. parahaemolyticus numbers, a procedure that would dilute out V. parahaemolyticus in these 'hot' oysters. This study demonstrates the variability of V. parahaemolyticus densities taken from healthy, neighboring individual oysters in the environment. Additionally, environmental V parahaemolyticus isolates were screened for the virulence-related genes, tdh and trh, using improved polymerase chain reaction primers and protocols. We detected these genes, previously thought to be rare in environmental isolates, in approximately half of the oyster isolates. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  18. 21 CFR 161.130 - Oysters.

    2010-04-01

    ... water. Before packing into the containers for shipment or other delivery for consumption the oysters are... FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION FISH AND SHELLFISH Requirements for Specific Standardized Fish and Shellfish § 161.130 Oysters. (a...

  19. Coral reefs - Specialized ecosystems

    Wafar, M.V.M.

    This paper discusses briefly some aspects that characterize and differentiate coral reef ecosystems from other tropical marine ecosystems. A brief account on the resources that are extractable from coral reefs, their susceptibility to natural...

  20. NMFS Reef Survey Forms

    National Oceanic and Atmospheric Administration, Department of Commerce — The Reef Environmental Survey Project (REEF) mission to educate and enlist divers in the conservation of marine habitats is accomplished primarily through its Fish...

  1. Sensitivity of oysters (Crassostrea Brasiliana) to radiation

    Mattiolo Marchese, S.R.; Mastro, N.L. del

    1997-01-01

    Various foods including oysters, crabs and shrimps have been shown to be possible transmitters of Vibrio ssp. Irradiation of sea-foods is being considered an alternative to intervention measures in Public Health against food borne diseases. The aim of this work was to establish, the radiation resistance of the oysters Crassostrea brasiliana. The oysters were irradiated with Co-60 radiation with doses of 0, 1.5, 3 and 6 kGy. Survival curves as a function of time showed that 100% of the oysters irradiated with doses of 3 kGy survived at least 6 days. 100% those irradiated with 6 kGy survived 3 days. The obtained results are auspicious considering that a dose of 2 kGy is already effective in the diminishing of the microbial load on oysters. (author)

  2. Sensory and Chemical Characteristics of Eastern Oysters(Crassostrea virginica)

    Chen, Luman

    2011-01-01

    Eastern Oysters, or Crassostrea virginica, are an important dietary component in the Chesapeake region and have supported a major fishery in the Chesapeake for more than 100 years. Virginia oysters do not always receive attention in up-scale markets. It is possible that the lack of information on sensory characteristics of Chesapeake oysters may contribute to this problem. In order to differentiate Chesapeake oysters from other oysters, a descriptive sensory test (n=8) was conducted and chemi...

  3. Environmental factors responsible for the incidence of antibiotic resistance genes in pristine Crassostrea virginica reefs

    Barkovskii, Andrei L.; Thomas, Michael; Hurley, Dorset; Teems, Clifford

    2012-01-01

    Highlights: ► Estuary was the major source of antibiotic resistance genes (ARG) for tidal creeks. ► Watersheds were the secondary source of ARG for tidal creeks. ► Watershed contribution corresponded to the degree of its anthropogenic disturbance. ► ARG in tidal creeks were carried by native hosts preferring low termohaline niches. ► ARG incidence was the highest in oysters implying ARG bioaccumulation/proliferation. - Abstract: The occurrence of tetracycline resistance (TRG) and integrase (INT) genes were monitored in Crassostrea virginica oyster reefs of three pristine creeks (SINERR, Georgia, USA). Their profiles revealed 85% similarity with the TRG/INT profiles observed in the adjacent to the SINERR and contaminated Altamaha River estuary (Barkovskii et al., 2010). The TRG/INT spectra and incidence frequencies corresponded to the source of oceanic input and to run-offs from creeks’ watersheds. The highest incidence frequencies and concentrations were observed in oysters. TRG/INT incidences correlated positively (Spearman Rank = 0.88), and negatively correlated (−0.63 to −0.79) with creek salinity, conductivity, dissolved solids, and temperature. Coliform incidence positively correlated with temperature, and not with the TRG/INT incidence. The Altamaha River estuary was the primary TRG/INT source for the reefs with contributions from creek’s watersheds. TRG/INT were carried by non-coliforms with a preference for low-to-temperate thermohaline environments coupled with bioaccumulation by oysters.

  4. Uptake of cadmium from Pacific oysters (Crassostrea gigas) in British Columbia oyster growers

    Copes, Ray; Clark, Nina Annika; Rideout, Karen; Palaty, Jan; Teschke, Kay

    2008-01-01

    Background: Pacific oysters along the North American coast from Washington to Alaska contain concentrations of cadmium (Cd) that are high by comparison with Atlantic oysters, frequently exceeding 2 μg/g wet weight, but it is unclear whether this Cd is absorbed by consumers. Objectives: To determine the effect of oyster consumption on Cd in blood and urine among a group with high oyster consumption. Methods: Sixty-one non-smoking oyster growers and family members with a mean age of 47.3±7.6 years (range 33-64) were interviewed by telephone to assess their oyster consumption and other sources of Cd exposure at present and 5 years prior to the start of oyster farming. Their blood and urine Cd concentrations were measured. Results: The geometric mean Cd concentration in blood was 0.83 μg/L and in urine was 0.76 μg/g creatinine. Thirty-six percent of participants had urinary Cd levels above 1 μg/g creatinine and 5% were above 2 μg/g creatinine. Recent (last 12 months) and long-term oyster consumptions were positive predictors of blood Cd but did not directly predict urinary Cd. The optimal model for predicting the variance in blood Cd included recent intake of oyster-derived Cd, serum iron concentration and recent ketchup consumption (R 2 =0.34, p=0.00004), with the latter two variables showing a protective effect. The factors found to predict urinary Cd were blood Cd concentration and duration of oyster farming. A rise in blood Cd was observed after 12 years of farming oysters, likely caused by higher consumption of oysters during this period. Conclusions: Oyster-derived Cd is bioavailable and affects body stores of the metal

  5. Review of the histopathological effects of ionizing radiation on the Pacific oyster, Crassostrea gigas

    Mix, M.C.

    1976-01-01

    Oysters were exposed to various doses of gamma radiation up to 400 k rads and maintained in a flow-through seawater system. They were sampled at intervals and histological analyses were made. Chronic degeneration was observed in all tissues dependent on a cell renewal system for their integrity. Results indicated that mortality was related to the failure of the cell renewal system to restore depleted cell populations and that the LD 50 concept has little practical value in studies on invertebrates

  6. Collapse of a historic oyster fishery: diagnosing causes and identifying paths toward increased resilience

    Edward V. Camp

    2015-09-01

    Full Text Available Diagnosing causal factors of change at the ecosystem level is challenging because multiple drivers often interact at various spatial and temporal scales. We employ an integrated natural and social science approach to assess potential mechanisms leading to the collapse of an estuarine social-ecological system, and recommend future paths to increased system resilience. Our case study is the collapse of the eastern oyster (Crassostrea virginica fishery in Apalachicola Bay, Florida, USA, and the associated impacts on local resource dependent communities. The oyster fishery collapse is the most recent in a series of environmental stressors to this region, which have included hurricanes and tropical storms, drought, and the Deepwater Horizon oil spill. We found it likely that the oyster collapse was not related to contamination from the recent oil spill, but rather to factors affecting oyster recruitment and survival, which may have been mediated by both human, e.g., fishing-related habitat alteration, and environmental, e.g., increased natural mortality from predators and disease, factors. The relative impact of each of these factors is likely to increase in the future because of changing climate and increased demand for fishery, water, and petroleum resources. Successful restoration and persistence of a viable oyster fishery will depend on: (1 implementation of some minimal best management practices, e.g., extensive habitat restoration via shell addition, and some spatial closures to harvest, (2 improving environmental knowledge and promoting episodic learning through enhanced monitoring and experimental management, and (3 continued community engagement necessary to produce adaptable governance suitable to responding to future unexpected challenges.

  7. Predicting the impacts of Mississippi River diversions and sea-level rise on spatial patterns of eastern oyster growth rate and production

    Wang, Hongqing; Chen, Qin; La Peyre, Megan K.; Hu, Kelin; La Peyre, Jerome F.

    2017-01-01

    There remains much debate regarding the perceived tradeoffs of using freshwater and sediment diversions for coastal restoration in terms of balancing the need for wetland restoration versus preserving eastern oyster (Crassostrea virginica) production. Further complicating the issue, climate change-induced sea-level rise (SLR) and land subsidence are also expected to affect estuarine water quality. In this study, we developed a process-based numerical modeling system that couples hydrodynamic, water quality, and oyster population dynamics. We selected Breton Sound Estuary (BSE) (∼2740 km2) in the eastern Mississippi River Deltaic Plain since it is home to several of the largest public oyster seed grounds and private leases for the Gulf coast. The coupled oyster population model was calibrated and validated against field observed oyster growth data. We predicted the responses of oyster population in BSE to small- (142 m3 s−1) and large-scale (7080 m3 s−1) river diversions at the Caernarvon Freshwater Diversion structure planned in the 2012 Coastal Master Plan (Louisiana) under low (0.38 m) and high (1.44 m) relative sea-level rise (RSLR = eustatic SLR + subsidence) compared to a baseline condition (Year 2009). Model results showed that the large-scale diversion had a stronger negative impact on oyster population dynamics via freshening of the entire estuary, resulting in reduced oyster growth rate and production than RSLR. Under the large-scale diversion, areas with optimal oyster growth rates (>15 mg ash-free dry weight (AFDW) oyster−1 wk−1) and production (>500 g AFDW m−2 yr−1) would shift seaward to the southeastern edge of the estuary, turning the estuary into a very low oyster production system. RSLR however played a greater role than the small-scale diversion on the magnitude and spatial pattern of oyster growth rate and production. RSLR would result in an overall estuary-wide decrease in oyster growth rate and production as a

  8. Feeding traits of the European flat oyster, Ostrea edulis, and the invasive Pacific oyster, Crassostrea gigas

    Nielsen, Mette; Hansen, Benni Winding; Vismann, Bent

    2017-01-01

    Two oysters, the native flat oyster, Ostrea edulis, and the non-indigenous Pacific oyster, Crassostrea gigas, have partially overlapping distributions in European waters. Relatively little is known about particle selection by O. edulis, and the goal of the present study was to establish baselines...... for particle selection by both oyster species under controlled conditions in the laboratory. The study was carried out with adult oysters of similar shell size collected in the Limfjord estuary, Denmark (56°47′N, 08°51′E), in November 2011. The feeding traits of both species [clearance rate (CR), retention...... efficiency (RE) and lower threshold for clearance (LTC)] were compared using five algal species with different cell sizes (5−32 µm ESD) (Isochrysis galbana, Rhodomonas salina, Thalassiosira weissflogii, Prorocentrum micans and Akashiwo sanguinea). Oysters were acclimated to an experimental temperature of 22...

  9. Spatial genetic features of eastern oysters (Crassostrea virginica Gmelin) in the Gulf of Mexico: northward movement of a secondary contact zone.

    Anderson, Joel D; Karel, William J; Mace, Christopher E; Bartram, Brian L; Hare, Matthew P

    2014-05-01

    The eastern oyster (Crassostrea virginica Gmelin) is an economically and ecologically valuable marine bivalve occurring in the Gulf of Mexico. This study builds upon previous research that identified two divergent populations of eastern oysters in the western Gulf of Mexico. Allelic and genotypic patterns from 11 microsatellite markers were used to assess genetic structure and migration between the previously described oyster populations in Texas. The main findings are as follows: (1) there are two distinct populations (F ST = 0.392, P turbidity and depth are not correlated with allele frequencies on reefs in the contact zone or when analyzed across Texas, and (4) there is little evidence of directional selection acting on the loci assayed here, although patterns at four markers suggested the influence of balancing selection based on outlier analyses. These results are consistent with long-term historical isolation between populations, followed by secondary contact. Recent hydrological changes in the area of secondary contact may be promoting migration in areas that were previously inhospitable to eastern oysters, and observed differences in the timing of spawning may limit hybridization between populations. Comparison of these findings with the results of an earlier study of oysters in Texas suggests that the secondary contact zone has shifted approximately 27 km north, in as little as a 23-year span.

  10. Norwalk virus gastroenteritis following raw oyster consumption.

    Gunn, R A; Janowski, H T; Lieb, S; Prather, E C; Greenberg, H B

    1982-03-01

    In January, 1980, six out of 13 persons (46%) attending a party in a small northwest Florida town near the Gulf of Mexico became ill with Norwalk virus gastroenteritis after eating raw oysters. Symptoms experienced by the ill persons were principally nausea (100%), vomiting (83%) and diarrhea (50%) and were of brief duration. The symptom complex and epidemiology of Norwalk virus infection closely resemble the gastrointestinal illness commonly referred to as the 24-hour intestinal flu or "stomach flu." Norwalk virus infection was identified in this outbreak by application of a recently developed sensitive and specific serologic radioimmunoassay. Oysters from the incriminated batch had fecal coliform levels above recommended standards; however, recent studies of oyster-harvesting waters have shown only a weak correlation between fecal coliforms and the presence of enteric viruses. Further studies are needed to determine whether modifications of monitoring modalities for oyster-harvesting waters are needed.

  11. Survival of Salmonella Newport in oysters.

    Morrison, Christopher M; Armstrong, Alexandra E; Evans, Sanford; Mild, Rita M; Langdon, Christopher J; Joens, Lynn A

    2011-08-02

    Salmonella enterica is the leading cause of laboratory-confirmed foodborne illness in the United States and raw shellfish consumption is a commonly implicated source of gastrointestinal pathogens. A 2005 epidemiological study done in our laboratory by Brands et al., showed that oysters in the United States are contaminated with Salmonella, and in particular, a specific strain of the Newport serovar. This work sought to further investigate the host-microbe interactions between Salmonella Newport and oysters. A procedure was developed to reliably and repeatedly expose oysters to enteric bacteria and quantify the subsequent levels of bacterial survival. The results show that 10 days after an exposure to Salmonella Newport, an average concentration of 3.7 × 10(3)CFU/g remains within the oyster meat, and even after 60 days there still can be more than 10(2)CFU/g remaining. However, the strain of Newport that predominated in the market survey done by Brands et al. does not survive within oysters or the estuarine environment better than any other strains of Salmonella we tested. Using this same methodology, we compared Salmonella Newport's ability to survive within oysters to a non-pathogenic strain of E. coli and found that after 10 days the concentration of Salmonella was 200-times greater than that of E. coli. We also compared those same strains of Salmonella and E. coli in a depuration process to determine if a constant 120 L/h flux of clean seawater could significantly reduce the concentration of bacteria within oysters and found that after 3 days the oysters retained over 10(4)CFU/g of Salmonella while the oysters exposed to the non-pathogenic strain of E. coli contained 100-times less bacteria. Overall, the results of this study demonstrate that any of the clinically relevant serovars of Salmonella can survive within oysters for significant periods of time after just one exposure event. Based on the drastic differences in survivability between Salmonella and a non

  12. Immunochromatographic assay of cadmium levels in oysters.

    Nishi, Kosuke; Kim, In-Hae; Itai, Takaaki; Sugahara, Takuya; Takeyama, Haruko; Ohkawa, Hideo

    2012-08-15

    Oysters are one of foodstuffs containing a relatively high amount of cadmium. Here we report on establishment of an immunochromatographic assay (ICA) method of cadmium levels in oysters. Cadmium was extracted with 0.l mol L(-1) HCl from oysters and cleaned up from other metals by the use of an anion-exchange column. The behavior of five metals Mn, Fe, Cu, Zn, and Cd was monitored at each step of extraction and clean-up procedure for the ICA method in an inductively coupled plasma-mass spectrometry (ICP-MS) analysis. The results revealed that a simple extraction method with the HCl solution was efficient enough to extract almost all of cadmium from oysters. Clean-up with an anion-exchange column presented almost no loss of cadmium adsorbed on the column and an efficient removal of metals other than cadmium. When a spiked recovery test was performed in the ICA method, the recovery ranged from 98% to 112% with relative standard deviations between 5.9% and 9.2%. The measured values of cadmium in various oyster samples in the ICA method were favorably correlated with those in ICP-MS analysis (r(2)=0.97). Overall results indicate that the ICA method established in the present study is an adequate and reliable detection method for cadmium levels in oysters. Copyright © 2012 Elsevier B.V. All rights reserved.

  13. Thermoluminescence analysis of irradiated oyster shells

    Cruz-Zaragoza, E.; Marcazzó, J.; Della Monaca, S.; Boniglia, C.; Gargiulo, R.; Bortolin, E.

    2012-01-01

    This paper reports the thermoluminescence (TL) analysis performed on the oyster shells powder. TL response of 60 Co gamma-rays irradiated samples were studied in the range from 80 Gy to 8 kGy doses. TL signal of irradiated shell powder was higher as compared to the unirradiated control samples, which allowed to identify the irradiated oysters. Results show that the oyster shells have good TL properties and can be useful for the identification of irradiated seafood as well as for the evaluation of the treatment dose. - Highlights: ► TL properties of irradiated oyster shell powder were studied. ► The SEM analysis shows that several elements are present in oyster shell powder. ► Calcite is the main component in the samples and β-calcite is also present. ► Following the European Standard EN 1788, the irradiated oyster can be identified. ► Determination of absorbed dose is possible by performing a preheat treatment.

  14. Effect of oyster mushroom ( Pleurotus ostreatus ) mycelia on ...

    Effect of oyster mushroom ( Pleurotus ostreatus ) mycelia on petroleum ... of chains of hydrocarbon in a petroleum-hydrocarbon-contaminated substrate over time. ... Keywords: Mycoremediation, Mycelia, Contaminated Soil, Oyster Mushroom ...

  15. INFLUENCE OF ALTERED FRESHWATER FLOWS ON EASTERN OYSTERS

    Abstract for National Shellfisheries AssociationEastern oysters Crassostrea virginica are prominent in Gulf of Mexico estuaries. Valued both commercially and ecologically, oyster populations are threatened by human activity, including dredging, harvesting, and upstream al...

  16. Oyster mushroom (Pleurotus spp.) cultivation technique using re ...

    SARAH

    2014-08-31

    Aug 31, 2014 ... using re-usable substrate containers and comparison of ... oyster mushrooms in combination with other vegetables complements availability of various essential ..... higher than from oyster mushrooms produced from any.

  17. A geological perspective on the degradation and conservation of western Atlantic coral reefs

    Kuffner, Ilsa B.; Toth, Lauren T.

    2016-01-01

    Continuing coral-reef degradation in the western Atlantic is resulting in loss of ecological and geologic functions of reefs. With the goal of assisting resource managers and stewards of reefs in setting and measuring progress toward realistic goals for coral-reef conservation and restoration, we examined reef degradation in this region from a geological perspective. The importance of ecosystem services provided by coral reefs—as breakwaters that dissipate wave energy and protect shorelines and as providers of habitat for innumerable species—cannot be overstated. However, the few coral species responsible for reef building in the western Atlantic during the last approximately 1.5 million years are not thriving in the 21st century. These species are highly sensitive to abrupt temperature extremes, prone to disease infection, and have low sexual reproductive potential. Their vulnerability and the low functional redundancy of branching corals have led to the low resilience of western Atlantic reef ecosystems. The decrease in live coral cover over the last 50 years highlights the need for study of relict (senescent) reefs, which, from the perspective of coastline protection and habitat structure, may be just as important to conserve as the living coral veneer. Research is needed to characterize the geological processes of bioerosion, reef cementation, and sediment transport as they relate to modern-day changes in reef elevation. For example, although parrotfish remove nuisance macroalgae, possibly promoting coral recruitment, they will not save Atlantic reefs from geological degradation. In fact, these fish are quickly nibbling away significant quantities of Holocene reef framework. The question of how different biota covering dead reefs affect framework resistance to biological and physical erosion needs to be addressed. Monitoring and managing reefs with respect to physical resilience, in addition to ecological resilience, could optimize the expenditure of

  18. Flat oysters in the Eierlandse Gat, Wadden Sea

    Have, van der T.M.; Kamermans, P.; Zee, van der E.M.

    2018-01-01

    This report presents the results of a short survey of flat oysters (Ostrea edulis) in the Western Wadden Sea. Ten sites were visited and flat oysters were found on nine locations in the Eijerlandse gat. Empty cockleshells and live and dead Pacific oysters provided the main settlement substrate. The

  19. Pyrosequencing Analysis of Norovirus Genogroup II Distribution in Sewage and Oysters: First Detection of GII.17 Kawasaki 2014 in Oysters.

    Pu, Jian; Kazama, Shinobu; Miura, Takayuki; Azraini, Nabila Dhyan; Konta, Yoshimitsu; Ito, Hiroaki; Ueki, You; Cahyaningrum, Ermaya Eka; Omura, Tatsuo; Watanabe, Toru

    2016-12-01

    Norovirus GII.3, GII.4, and GII.17 were detected using pyrosequencing in sewage and oysters in January and February 2015, in Japan. The strains in sewage and oyster samples were genetically identical or similar, predominant strains belonging to GII.17 Kawasaki 2014 lineage. This is the first report of GII.17 Kawasaki 2014 in oysters.

  20. Prevalence of Salmonella spp. in Oysters in the United States

    Brands, Danielle A.; Inman, Allison E.; Gerba, Charles P.; Maré, C. John; Billington, Stephen J.; Saif, Linda A.; Levine, Jay F.; Joens, Lynn A.

    2005-01-01

    Food-borne diseases such as salmonellosis can be attributed, in part, to the consumption of raw oysters. To determine the prevalence of Salmonella spp. in oysters, oysters harvested from 36 U.S. bays (12 each from the West, East, and Gulf coasts in the summer of 2002, and 12 bays, four per coast, in the winter of 2002-2003) were tested. Salmonella was isolated from oysters from each coast of the United States, and 7.4% of all oysters tested contained Salmonella. Isolation tended to be bay spe...

  1. Coral reefs and eutrophication

    Stambler, N.

    1999-01-01

    Coral reefs are found in oligotrophic waters, which are poor in nutrients such as nitrogen, phosphate, and possibly iron. In spite of this, coral reefs exhibit high gross primary productivity rates. They thrive in oligotrophic conditions because of the symbiotic relationship between corals and dinoflagellate algae (zooxanthellae) embedded in the coral tissue. In their mutualistic symbiosis, the zooxanthellae contribute their photosynthetic capability as the basis for the metabolic energy of the whole association, and eventually of a great part of the entire reef ecosystem

  2. Oyster leases in Louisiana, Geographic NAD83, LOSCO (1997) [oyster_leases_USACE_1997

    Louisiana Geographic Information Center — This data set indicates the locations of oyster leases in Louisiana. The lease areas should be polygons, however, the source data has very poor topology including...

  3. Associations between land use and Perkinsus marinus infection of eastern oysters in a high salinity, partially urbanized estuary

    Gray, Brian R.; Bushek, David; Drane, J. Wanzer; Porter, Dwayne

    2009-01-01

    Infection levels of eastern oysters by the unicellular pathogen Perkinsus marinus have been associated with anthropogenic influences in laboratory studies. However, these relationships have been difficult to investigate in the field because anthropogenic inputs are often associated with natural influences such as freshwater inflow, which can also affect infection levels. We addressed P. marinus-land use associations using field-collected data from Murrells Inlet, South Carolina, USA, a developed, coastal estuary with relatively minor freshwater inputs. Ten oysters from each of 30 reefs were sampled quarterly in each of 2 years. Distances to nearest urbanized land class and to nearest stormwater outfall were measured via both tidal creeks and an elaboration of Euclidean distance. As the forms of any associations between oyster infection and distance to urbanization were unknown a priori, we used data from the first and second years of the study as exploratory and confirmatory datasets, respectively. With one exception, quarterly land use associations identified using the exploratory dataset were not confirmed using the confirmatory dataset. The exception was an association between the prevalence of moderate to high infection levels in winter and decreasing distance to nearest urban land use. Given that the study design appeared adequate to detect effects inferred from the exploratory dataset, these results suggest that effects of land use gradients were largely insubstantial or were ephemeral with duration less than 3 months.

  4. Coral Reef Guidance

    Guidance prepared by EPA and Army Corps of Engineers concerning coral reef protection under the Clean Water Act, Marine Protection, Research, and Sanctuaries Act, Rivers and Harbors Act, and Federal Project Authorities.

  5. Nitrification in reef corals

    Wafar, M.V.M.; Wafar, S.; David, J.J.

    . An estimate of the density of nitrifying bacteria on living corals can be made by comparing the nitrifying rates of bacterial cells and the rate of production of NO,-. Kaplan (1983) summarized the growth con- stants of marine nitrifying bacteria... Reef Con=. 3: 395-399. -, C. R. WILKINSON, V. p. VICENTE, J. M. MORELL, AND E. OTERO. 1988. Nitrate release by Carib- bean reef sponges. Limnol. Oceanogr. 33: 114- 120. CROSSLAND, C. J., AND D. J. BARNES. 1983. Dissolved nutrients and organic...

  6. Coral reefs in the Anthropocene.

    Hughes, Terry P; Barnes, Michele L; Bellwood, David R; Cinner, Joshua E; Cumming, Graeme S; Jackson, Jeremy B C; Kleypas, Joanie; van de Leemput, Ingrid A; Lough, Janice M; Morrison, Tiffany H; Palumbi, Stephen R; van Nes, Egbert H; Scheffer, Marten

    2017-05-31

    Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything observed previously by humans. Returning reefs to past configurations is no longer an option. Instead, the global challenge is to steer reefs through the Anthropocene era in a way that maintains their biological functions. Successful navigation of this transition will require radical changes in the science, management and governance of coral reefs.

  7. Fish-derived nutrient hotspots shape coral reef benthic communities.

    Shantz, Andrew A; Ladd, Mark C; Schrack, Elizabeth; Burkepile, Deron E

    2015-12-01

    restoration strategies may benefit from focusing on providing structure for aggregating fishes on reefs with low topographic complexity or focusing the restoration of nursery raised corals around existing nutrient hotspots.

  8. Drywell corrosion stopped at Oyster Creek

    Lipford, B.L.; Flynn, J.C.

    1993-01-01

    This article describes the detection of corrosion on the drywell containment vessel of Oyster Creek Nuclear Plant and the application of a protective coating to repair the drywell. The topics of the article include drywell design features, identification of the problem, initial action, drywell corrosion, failure of cathodic protection, long-term repair, and repair results

  9. INORGANIC ELEMENTS AND DISTRIBUTION OF EASTERN OYSTERS.

    Fisher, William S. In press. Inorganic Elements and Distribution of Eastern Oysters (Abstract). To be presented at the 96th Annual Meeting (Aquaculture 2004) of the National Shellfisheries Association, 1-5 March 2004, Honolulu, HI. 1 p. (ERL,GB R962). For over a century w...

  10. Oyster mycelium on the liquid medium

    Mariusz Gapiński

    2013-12-01

    Full Text Available The research presents the results of oyster mycelium growth on the liquid medium. The growth of 4-mycelium genius: Pleurotus citrinopileatus Singer, Pleurotus djamor Fries, Boedjin, Pleurotus erynii Fr. Kumm. and Pleurotus precoce Fr. Quel was tested. The quality and quantity of mycelium was assumed.

  11. Biorock Electric Reefs Grow Back Severely Eroded Beaches in Months

    Thomas J. F. Goreau

    2017-10-01

    Full Text Available Severely eroded beaches on low lying islands in Indonesia were grown back in a few months—believed to be a record—using an innovative method of shore protection, Biorock electric reef technology. Biorock shore protection reefs are growing limestone structures that get stronger with age and repair themselves, are cheaper than concrete or rock sea walls and breakwaters, and are much more effective at shore protection and beach growth. Biorock reefs are permeable, porous, growing, self-repairing structures of any size or shape, which dissipate wave energy by internal refraction, diffraction, and frictional dissipation. They do not cause reflection of waves like hard sea walls and breakwaters, which erodes the sand in front of, and then underneath, such structures, until they collapse. Biorock reefs stimulate settlement, growth, survival, and resistance to the environmental stress of all forms of marine life, restoring coral reefs, sea grasses, biological sand production, and fisheries habitat. Biorock reefs can grow back eroded beaches and islands faster than the rate of sea level rise, and are the most cost-effective method of shore protection and adaptation to global sea level rise for low lying islands and coasts.

  12. NOAA Coral Reef Watch Larval Connectivity, Florida Reef Tract

    National Oceanic and Atmospheric Administration, Department of Commerce — Climate change threatens even the best-protected and most remote reefs. Reef recovery following catastrophic disturbance usually requires disturbed sites be reseeded...

  13. A microbial spoilage profile of half shell Pacific oysters (Crassostrea gigas) and Sydney rock oysters (Saccostrea glomerata).

    Madigan, Thomas L; Bott, Nathan J; Torok, Valeria A; Percy, Nigel J; Carragher, John F; de Barros Lopes, Miguel A; Kiermeier, Andreas

    2014-04-01

    This study aimed to assess bacterial spoilage of half shell Pacific and Sydney rock oysters during storage using microbial culture and 16S rRNA pyrosequencing. Odour and pH of oyster meats were also investigated. Estimation of microbiological counts by microbial culture highlighted growth of psychrotrophic bacteria. During storage, odour scores (a score describing deterioration of fresh odours where a score of 1 is fresh and 4 is completely spoiled) increased from 1.0 to 3.0 for Pacific oysters and from 1.3 to 3.4 for Sydney rock oysters. pH results obtained for both species fluctuated during storage (range 6.28-6.73) with an overall increase at end of storage. Pyrosequencing revealed that the majority of bacteria at Day 0 represented taxa from amongst the Proteobacteria, Tenericutes and Spirochaetes that have not been cultured and systematically described. During storage, Proteobacteria became abundant with Pseudoalteromonas and Vibrio found to be dominant in both oyster species at Day 7. Analysis of the pyrosequencing data showed significant differences in bacterial profiles between oyster species and storage time (both P = 0.001). As oysters spoiled, bacterial profiles between oyster species became more similar indicating a common spoilage profile. Data presented here provides detailed insight into the changing bacterial profile of shucked oysters during storage and has identified two genera, Pseudoalteromonas and Vibrio, as being important in spoilage of shucked oysters. Copyright © 2013 Elsevier Ltd. All rights reserved.

  14. Reef Visual Census (RVC) data.

    National Oceanic and Atmospheric Administration, Department of Commerce — Provide data on frequency of occurrence , density abundance, and length frequency of reef fish throughout Florida reef tract from 1978 forward.

  15. Immune and stress responses in oysters with insights on adaptation.

    Guo, Ximing; He, Yan; Zhang, Linlin; Lelong, Christophe; Jouaux, Aude

    2015-09-01

    Oysters are representative bivalve molluscs that are widely distributed in world oceans. As successful colonizers of estuaries and intertidal zones, oysters are remarkably resilient against harsh environmental conditions including wide fluctuations in temperature and salinity as well as prolonged air exposure. Oysters have no adaptive immunity but can thrive in microbe-rich estuaries as filter-feeders. These unique adaptations make oysters interesting models to study the evolution of host-defense systems. Recent advances in genomic studies including sequencing of the oyster genome have provided insights into oyster's immune and stress responses underlying their amazing resilience. Studies show that the oyster genomes are highly polymorphic and complex, which may be key to their resilience. The oyster genome has a large gene repertoire that is enriched for immune and stress response genes. Thousands of genes are involved in oyster's immune and stress responses, through complex interactions, with many gene families expanded showing high sequence, structural and functional diversity. The high diversity of immune receptors and effectors may provide oysters with enhanced specificity in immune recognition and response to cope with diverse pathogens in the absence of adaptive immunity. Some members of expanded immune gene families have diverged to function at different temperatures and salinities or assumed new roles in abiotic stress response. Most canonical innate immunity pathways are conserved in oysters and supported by a large number of diverse and often novel genes. The great diversity in immune and stress response genes exhibited by expanded gene families as well as high sequence and structural polymorphisms may be central to oyster's adaptation to highly stressful and widely changing environments. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Exploring Proteomic Variation in Pacific Oysters (Crassostrea gigas)

    Venkataraman, Yaamini

    2017-01-01

    150 sibling Pacific oysters (Crassostrea gigas) were outplanted at five different sites around Puget Sound. Oysters were placed in exclusion cages either inside or outside of eelgrass beds. After a month of environmental exposure, gill tissue samples were collected for proteomic analyses. Initial DIA mass spectrometry methods on a subset of oysters (one per site and eelgrass condition, 10 total) provide data for upwards of 6,000 proteins. A subset of stress-related proteins reveal site-specif...

  17. Prevalence of Salmonella spp. in oysters in the United States.

    Brands, Danielle A; Inman, Allison E; Gerba, Charles P; Maré, C John; Billington, Stephen J; Saif, Linda A; Levine, Jay F; Joens, Lynn A

    2005-02-01

    Food-borne diseases such as salmonellosis can be attributed, in part, to the consumption of raw oysters. To determine the prevalence of Salmonella spp. in oysters, oysters harvested from 36 U.S. bays (12 each from the West, East, and Gulf coasts in the summer of 2002, and 12 bays, four per coast, in the winter of 2002-2003) were tested. Salmonella was isolated from oysters from each coast of the United States, and 7.4% of all oysters tested contained Salmonella. Isolation tended to be bay specific, with some bays having a high prevalence of Salmonella, while other bays had none. Differences in the percentage of oysters from which Salmonella was isolated were observed between the summer and winter months, with winter numbers much lower probably due to a variety of weather-related events. The vast majority (78/101) of Salmonella isolates from oysters were Salmonella enterica serovar Newport, a major human pathogen, confirming the human health hazard of raw oyster consumption. Contrary to previous findings, no relationship was found between the isolation of fecal coliforms and Salmonella from oysters, indicating a necessity for specific monitoring for Salmonella and other pathogens rather than the current reliance on fecal coliform testing.

  18. Temperature-dependent stress response in oysters, Crassostrea virginica: Pollution reduces temperature tolerance in oysters

    Lannig, Gisela; Flores, Jason F.; Sokolova, Inna M.

    2006-01-01

    Combined effects of temperature and a toxic metal, cadmium (Cd), on energy metabolism were studied in a model marine bivalve, the eastern oyster Crassostrea virginica, acclimated at 20, 24 and 28 deg. C and exposed to 50 μg l -1 of Cd. Both increasing temperature and Cd exposure led to a rise in standard metabolic rates, and combined stressors appeared to override the capability for aerobic energy production resulting in impaired stress tolerance. Oysters exposed to elevated temperature but not Cd showed no significant change in condition, survival rate and lipid peroxidation, whereas those exposed to both Cd and temperature stress suffered high mortality accompanied by low condition index and elevated lipid peroxidation. Furthermore, RNA/DNA ratios indicative of protein synthesis rate, and levels of glutathione, which is involved in metal detoxification, increased in Cd-exposed oysters at 20 deg. C but not at 28 deg. C. Implications of the synergism between elevated temperatures and cadmium stress on energy metabolism of oysters are discussed in the light of the potential effects of climate change on oyster populations in polluted areas

  19. Coral reef degradation is not correlated with local human population density

    Bruno, John F.; Valdivia, Abel

    2016-07-01

    The global decline of reef-building corals is understood to be due to a combination of local and global stressors. However, many reef scientists assume that local factors predominate and that isolated reefs, far from human activities, are generally healthier and more resilient. Here we show that coral reef degradation is not correlated with human population density. This suggests that local factors such as fishing and pollution are having minimal effects or that their impacts are masked by global drivers such as ocean warming. Our results also suggest that the effects of local and global stressors are antagonistic, rather than synergistic as widely assumed. These findings indicate that local management alone cannot restore coral populations or increase the resilience of reefs to large-scale impacts. They also highlight the truly global reach of anthropogenic warming and the immediate need for drastic and sustained cuts in carbon emissions.

  20. Coral reef ecosystem

    Wafar, M.V.M.; Wafar, S.

    ), on submerged banks like Gave shani bank (13°24'N; 73°45'E) (Nair and Qasim 1978) andSidere~ko Bank (13°43.5' N; 73°42'E) (Rao 1972) and as stray individual units off Visakhapatnam (Bakus, G. personal communication) and Pondicherry (Ramesh, A. personal... communication). Fossil reefs, drowned as a result of the Holocene sea level rise, occur at 92, 85, 75 and 55 m depth along .. ~ !! ":2 0. ~ Figure 3.1 Graphical Representation of the SO-Box Model of a Caribbean Coral Reef Key: 1. Benthic producers. 2. Detritus...

  1. Calcium, strontium and fluorine patterns in shells of Pacific Oyster and Rock Oyster

    Coote, G.E.

    1996-01-01

    The IGNS proton microprobe has been applied in a study of the distribution of Calcium, Strontium and Fluorine in the calcite shells of Pacific Oyster (Crassostrea gigas) and the native Rock oyster (Crassostrea glomerata). The ultimate aim is to derive information which could have application in such fields as archaeology, biology, palaeontology, aquaculture and environmental studies. Calcium and strontium were determined from their emissions of K X-rays under proton bombardment, and fluorine from the 19 F (p,alpha gamma) 16 O nuclear reaction. The three elements were determined simultaneously at points no more than 20 micrometres apart. A total of 14 one and 17 two-dimensional scans were performed on sections of the shells embedded in epoxy resin. We studied shells from nine Pacific oysters (five transferred from the Marlborough Sounds to Wellington Harbour and four from the Bay of Islands). (author). 11 refs.; 5 figs

  2. Eating oysters without risk of vibriosis: application of a bacteriophage against Vibrio parahaemolyticus in oysters.

    Jun, Jin Woo; Kim, Hyoun Joong; Yun, Sae Kil; Chai, Ji Young; Park, Se Chang

    2014-10-01

    Vibrio parahaemolyticus is a major cause of foodborne illness and related with the consumption of raw contaminated seafood, especially oysters. To evaluate the effectiveness of various applications of a bacteriophage (phage), pVp-1, against a multiple-antibiotic-resistant V. parahaemolyticus pandemic strain (CRS 09-17), we designed artificial contamination models that are most likely to be encountered during oyster processing. When live oysters were treated with bath immersion with pVp-1 after CRS 09-17 challenge, the growth of bacterial strain was significantly reduced. After 72h of phage application with bath immersion, bacterial growth reduction was observed to be 8.9×10(6)CFU/ml (control group) to 1.4×10CFU/ml (treatment group). When pVp-1 was surface-applied on the flesh of oysters after CRS 09-17 inoculation, bacterial growth was properly inhibited. After 12h of phage application on the surface of oysters, bacterial growth inhibition was revealed to be 1.44×10(6)CFU/ml (control group) to 1.94CFU/ml (treatment group). This is the first report, to the best of our knowledge, of oyster surface-application of a phage against a multiple-antibiotic-resistant V. parahaemolyticus pandemic strain, and our successful phage application to various situations emphasizes the potential use of the phage to avoid V. parahaemolyticus infection from aquaculture to consumption. Copyright © 2014 Elsevier B.V. All rights reserved.

  3. Anticipative management for coral reef ecosystem services in the 21st century.

    Rogers, Alice; Harborne, Alastair R; Brown, Christopher J; Bozec, Yves-Marie; Castro, Carolina; Chollett, Iliana; Hock, Karlo; Knowland, Cheryl A; Marshell, Alyssa; Ortiz, Juan C; Razak, Tries; Roff, George; Samper-Villarreal, Jimena; Saunders, Megan I; Wolff, Nicholas H; Mumby, Peter J

    2015-02-01

    Under projections of global climate change and other stressors, significant changes in the ecology, structure and function of coral reefs are predicted. Current management strategies tend to look to the past to set goals, focusing on halting declines and restoring baseline conditions. Here, we explore a complementary approach to decision making that is based on the anticipation of future changes in ecosystem state, function and services. Reviewing the existing literature and utilizing a scenario planning approach, we explore how the structure of coral reef communities might change in the future in response to global climate change and overfishing. We incorporate uncertainties in our predictions by considering heterogeneity in reef types in relation to structural complexity and primary productivity. We examine 14 ecosystem services provided by reefs, and rate their sensitivity to a range of future scenarios and management options. Our predictions suggest that the efficacy of management is highly dependent on biophysical characteristics and reef state. Reserves are currently widely used and are predicted to remain effective for reefs with high structural complexity. However, when complexity is lost, maximizing service provision requires a broader portfolio of management approaches, including the provision of artificial complexity, coral restoration, fish aggregation devices and herbivore management. Increased use of such management tools will require capacity building and technique refinement and we therefore conclude that diversification of our management toolbox should be considered urgently to prepare for the challenges of managing reefs into the 21st century. © 2014 John Wiley & Sons Ltd.

  4. Decontamination of Cuban oysters using irradiation

    Cisneros Despaigne, E; Leyva Castillo, V; Martinez, L L; Lara Ortiz, C [Instituto de Nutricion e Higiene de los Alimentos (Cuba); Castillo Rodriguez, E [Centro Nacional de Salud Animal (Cuba)

    2001-04-01

    Oysters (Crassostrea virginica) collected on the Cuban coast near Havana were examined for contamination with Vibrio cholerae and other potentially pathogenic Vibrio species. The strains thus isolated were characterized and identified to species following standard methods, and their radiation resistance (D{sub 10}) was determined in pure culture. The Vibrio species most often isolated were V. cholerae, V. parahaemolyticus and V. Alginolyticus. Representative cultures from each species were later used to inoculate shucked oysters to determine the optimal radiation dose that would ensure elimination of 10{sup 8} colony forming units (CFU)/g. The highest proportion of isolates were identified as Vibrio parahaemolyticus and V. algynoliticus. Non-O1 strains of Vibrio cholerae were isolated from 50% of samples, but no V. cholerae O1 was identified. D{sub 10} values calculated for the various strains were low in relation to those in the literature. The radiation dose for decontaminating heavily inoculated (10{sup 8} CFU/g) oysters was 1.2 kGy. (author)

  5. Decontamination of Cuban oysters using irradiation

    Cisneros Despaigne, E.; Leyva Castillo, V.; Martinez, L.L.; Lara Ortiz, C.; Castillo Rodriguez, E.

    2001-01-01

    Oysters (Crassostrea virginica) collected on the Cuban coast near Havana were examined for contamination with Vibrio cholerae and other potentially pathogenic Vibrio species. The strains thus isolated were characterized and identified to species following standard methods, and their radiation resistance (D 10 ) was determined in pure culture. The Vibrio species most often isolated were V. cholerae, V. parahaemolyticus and V. Alginolyticus. Representative cultures from each species were later used to inoculate shucked oysters to determine the optimal radiation dose that would ensure elimination of 10 8 colony forming units (CFU)/g. The highest proportion of isolates were identified as Vibrio parahaemolyticus and V. algynoliticus. Non-O1 strains of Vibrio cholerae were isolated from 50% of samples, but no V. cholerae O1 was identified. D 10 values calculated for the various strains were low in relation to those in the literature. The radiation dose for decontaminating heavily inoculated (10 8 CFU/g) oysters was 1.2 kGy. (author)

  6. The potential of aerial photography for estimating surface areas of intertidal Pacific oyster beds (Crassostrea gigas)

    Kater, B.J.; Baars, J.M.D.D.

    2004-01-01

    Pacific oysters were introduced into the Eastern Scheldt in 1964 for breeding purposes. The first spatfall of wild Pacific oysters was recorded in 1976, and a second larval outburst in 1982 definitely settled wild Pacific oysters in the Eastern Scheldt waters. Oyster beds on intertidal and subtidal

  7. Coral Reef Biological Criteria

    Coral reefs worldwide are experiencing decline from a variety of stressors. Some important stressors are land-based sources of pollution and human activities in the coastal zone. However, few tools are available to offset the impact of these stressors. The Clean Water Act (CWA...

  8. Assessment of Acropora palmata in the Mesoamerican Reef System.

    Rodríguez-Martínez, Rosa E; Banaszak, Anastazia T; McField, Melanie D; Beltrán-Torres, Aurora U; Álvarez-Filip, Lorenzo

    2014-01-01

    The once-dominant shallow reef-building coral Acropora palmata has suffered drastic geographical declines in the wider Caribbean from a disease epidemic that began in the late 1970s. At present there is a lack of quantitative data to determine whether this species is recovering over large spatial scales. Here, we use quantitative surveys conducted in 107 shallow-water reef sites between 2010 and 2012 to investigate the current distribution and abundance of A. palmata along the Mesoamerican Reef System (MRS). Using historical data we also explored how the distribution and abundance of this species has changed in the northern portion of the MRS between 1985 and 2010-2012. A. palmata was recorded in only a fifth of the surveyed reef sites in 2010-2012. In the majority of these reef sites the presence of A. palmata was patchy and rare. Only one site (Limones reef), in the northernmost portion of the MRS, presented considerably high A. palmata cover (mean: 34.7%, SD: 24.5%). At this site, the size-frequency distribution of A. palmata colonies was skewed towards small colony sizes; 84% of the colonies were healthy, however disease prevalence increased with colony size. A comparison with historical data showed that in the northern portion of the MRS, in 1985, A. palmata occurred in 74% of the 31 surveyed sites and had a mean cover of 7.7% (SD = 9.0), whereas in 2010-2012 this species was recorded in 48% of the sites with a mean cover of 2.9% (SD = 7.5). A. palmata populations along the MRS are failing to recover the distribution and abundance they had prior to the 1980s. Investigating the biological (e.g., population genetics) and environmental conditions (e.g., sources of stress) of the few standing reefs with relatively high A. palmata cover is crucial for the development of informed restoration models for this species.

  9. Markers associated with disease resistance in Eastern oysters, Crassostrea virginica

    Eastern oyster, Crassostrea viginica, is an economically important aquaculture species in the USA, but production has been impacted by diseases such as dermo and MSX. Efforts have been put into the development of disease-resistant oyster lines using selective breeding techniques. However, these met...

  10. Bioimmuring late Cretaceous and Recent oysters : 'A view from within'

    Jagt, John W M; Neumann, Christian; Schulp, Anne S.

    2007-01-01

    Being obligate cementers, oysters (Ostreoidea), both fossil and Recent, often yield valuable information on their substrates, whether biotic/ abiotic, perishable or inert. By a process called bioimmuration, oyster shells may preserve lightly or non-calcified sessile organisms already present on the

  11. Cultivation of oyster mushroom ( Pleurotus spp.) on palm oil ...

    Oyster mushroom is a popular mushroom due to its nutritional, medicinal and potential commercial value. In Malaysia, the fungus is currently cultivated on sawdust and rice husk. In this study, the efficiency of cultivating oyster mushroom was assessed using palm oil mesocarp fibre as a substrate. The experiment consisted ...

  12. Resource potential and status of pearl oyster fishery in India

    Ingole, B.S.; Parulekar, A.H.

    Many cultivable species of pearl oysters are known to occur in the Indo-Australian Archipelago which is an important region in the world distribution of pearl oysters. An account of the development of Indian pearl fisheries that took place over...

  13. Seasonal dynamics and diversity of bacteria in retail oyster tissues.

    Wang, Dapeng; Zhang, Qian; Cui, Yan; Shi, Xianming

    2014-03-03

    Oysters are one of the important vehicles for the transfer of foodborne pathogens. It was reported that bacteria could be bio-accumulated mainly in the gills and digestive glands. In artificially treated oysters, bacterial communities have been investigated by culture-independent methods after harvest. However, little information is available on the seasonal dynamics of bacterial accumulation in retail oyster tissues. In this study, retail oysters were collected from local market in different seasons. The seasonal dynamics and diversity of bacteria in oyster tissues, including the gills, digestive glands and residual tissues, were analyzed by denaturing gradient gel electrophoresis (DGGE). It was interesting that the highest bacterial diversity appeared in the Fall season, not in summer. Our results indicated that Proteobacteria was the predominant member (23/46) in oyster tissues. Our results also suggested that bacterial diversity in gills was higher than that in digestive glands and other tissues. In addition, not all the bacteria collected from surrounding water by gills were transferred to digestive glands. On the other hand, few bacteria were found in oyster tissues except in the gills. Therefore, the gills could be the best candidate target tissue for monitoring of pathogenic bacteria either to human or to oyster. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Macrofauna Settlement on Pearl Oyster Collectors in Kenya ...

    Key words: Pearl oysters, seed collection, macrofauna, bivalves, settlement, monsoon seasons,. Kenya .... have shown that pearl oyster settlement is higher within calm ...... collectors in the Timor Sea, Northern Australia. J. Shellfish ... systems. Aquaculture, 189: 375-388. Urban, H.J. (2000b): Culture potential of the pearl.

  15. Microcontroller based automatic temperature control for oyster mushroom plants

    Sihombing, P.; Astuti, T. P.; Herriyance; Sitompul, D.

    2018-03-01

    In the cultivation of Oyster Mushrooms need special treatment because oyster mushrooms are susceptible to disease. Mushroom growth will be inhibited if the temperature and humidity are not well controlled because temperature and inertia can affect mold growth. Oyster mushroom growth usually will be optimal at temperatures around 22-28°C and humidity around 70-90%. This problem is often encountered in the cultivation of oyster mushrooms. Therefore it is very important to control the temperature and humidity of the room of oyster mushroom cultivation. In this paper, we developed an automatic temperature monitoring tool in the cultivation of oyster mushroom-based Arduino Uno microcontroller. We have designed a tool that will control the temperature and humidity automatically by Android Smartphone. If the temperature increased more than 28°C in the room of mushroom plants, then this tool will turn on the pump automatically to run water in order to lower the room temperature. And if the room temperature of mushroom plants below of 22°C, then the light will be turned on in order to heat the room. Thus the temperature in the room oyster mushrooms will remain stable so that the growth of oyster mushrooms can grow with good quality.

  16. Coral reefs for coastal protection: A new methodological approach and engineering case study in Grenada.

    Reguero, Borja G; Beck, Michael W; Agostini, Vera N; Kramer, Philip; Hancock, Boze

    2018-03-15

    Coastal communities in tropical environments are at increasing risk from both environmental degradation and climate change and require urgent local adaptation action. Evidences show coral reefs play a critical role in wave attenuation but relatively little direct connection has been drawn between these effects and impacts on shorelines. Reefs are rarely assessed for their coastal protection service and thus not managed for their infrastructure benefits, while widespread damage and degradation continues. This paper presents a systematic approach to assess the protective role of coral reefs and to examine solutions based on the reef's influence on wave propagation patterns. Portions of the shoreline of Grenville Bay, Grenada, have seen acute shoreline erosion and coastal flooding. This paper (i) analyzes the historical changes in the shoreline and the local marine, (ii) assess the role of coral reefs in shoreline positioning through a shoreline equilibrium model first applied to coral reef environments, and (iii) design and begin implementation of a reef-based solution to reduce erosion and flooding. Coastline changes in the bay over the past 6 decades are analyzed from bathymetry and benthic surveys, historical imagery, historical wave and sea level data and modeling of wave dynamics. The analysis shows that, at present, the healthy and well-developed coral reefs system in the southern bay keeps the shoreline in equilibrium and stable, whereas reef degradation in the northern bay is linked with severe coastal erosion. A comparison of wave energy modeling for past bathymetry indicates that degradation of the coral reefs better explains erosion than changes in climate and historical sea level rise. Using this knowledge on how reefs affect the hydrodynamics, a reef restoration solution is designed and studied to ameliorate the coastal erosion and flooding. A characteristic design provides a modular design that can meet specific engineering, ecological and

  17. Utilization of detrital complexes by the oyster, Crassostrea virginica (Gmelin)

    Crosby, M.P.

    1987-01-01

    The contribution of bacteria and nonliving particulate organic matter of detrital complexes to the nutrition of the American oyster, Crassostrea virginica, was investigated in the laboratory under normal feeding conditions. Results indicate the oysters were capable of assimilating crude fiber extracted from 14 C-Spartina alterniflora with an efficiency of approximately 3% and that enteric bacteria did not enhance this process. Less than 1% of an oyster's energetic demands could be met by direct utilization of this substrate, in the Choptank River subestuary of the Chesapeake Bay. The potential contribution of refractory organics to oysters in large salt marshes having crude fiber concentration greater than in the Choptank system, are discussed. The ability of the oyster to utilize 14 C and 15 N from cellulolytic marine bacteria, isolated from a S. alterniflora dominated salt marsh, was also studied

  18. Upper Silurian reef mounds on a shallowing carbonate ramp, Devon Island, Arctic Canada

    Dixon, O A [Ottawa Univ., ON (Canada); Graf, G C [Chevron Canada Resources, Calgary, AB (Canada)

    1992-03-01

    Near Gascoyne Inlet, the topmost Douro and lowermost Barlow Inlet formations record overall upward shallowing from ramp to shallow shelf conditions. This transitional sequence contains bioherms of various sizes, from small isolated reef mounds 1-2 m across to larger, compound reef mounds over 50 m thick and 60 m across, as well as distictive inter- and pre-reef mound facies. The larger reef mounds show stages intermediate in character between those in sponge-dominated reef mounds of the Douro Formation and in larger stromatoporoid-crinoid dominated reefs in the Barlow Inlet Formation. Three principal reef mounds developed in turn. An initial partly lithified lime mudstone, containing scattered corals and apparently relict sponge-cryptomicrobial fabrics, developed on sheets of oncolitic storm debris in mainly low energy conditions between storm and fairweather wave bases. With gradual shallowing and progressively higher energy conditions above fairweather wave base, a middle facies of coral- and crinoid-rich mudstone developed. An abrupt deepening restored conditions of low energy, and the ensuing upper facies of the reef mounds is more varied, comprising sparsely fossiliferous and locally fenestral lime mudstones, patchy coral bafflestone and bindstone, coarse encrinites and substantially culminating stromatoporoid bindstone. 36 refs., 14 figs., 5 tabs.

  19. Behavior of pathogenic bacteria in the oyster, Crassostrea commercialis, during depuration, re-laying, and storage.

    Son, N T; Fleet, G H

    1980-01-01

    Oysters (Crassostrea commercials) harvested from major cultivation areas within the state of New South Wales, Australia, were commonly contaminated with low levels of the food-poisoning organisms Bacillus cereus, Clostridium perfringens, and Vibrio parahaemolyticus. Salmonella was found in oysters on only one occasion. These bacteria were cleansed from oysters during oyster purification by re-laying in a non-polluted waterway. Oysters were laboratory contaminated to levels in excess 1,000 cel...

  20. Interactions between the introduced Pacific oyster Crassostrea gigas and the indigenous blue mussel Mytilus edulis. Local-scale food competition

    Hans, I.W.

    2004-01-01

    The aim of this study was to determine if food competition between mussels and oysters occurs, and how mussel and oyster growth is affected by this interaction. This was done by relating mussel growth to oyster density relating oyster growth to oyster biomass and perform a field control, by

  1. Prevalence and characterization of Salmonella serovars isolated from oysters served raw in restaurants.

    Brillhart, Crystal D; Joens, Lynn A

    2011-06-01

    To determine if Salmonella-contaminated oysters are reaching consumer tables, a survey of raw oysters served in eight Tucson restaurants was performed from October 2007 to September 2008. Salmonella spp. were isolated during 7 of the 8 months surveyed and were present in 1.2% of 2,281 oysters tested. This observed prevalence is lower than that seen in a previous study in which U.S. market oysters were purchased from producers at bays where oysters are harvested. To test whether the process of refrigerating oysters in restaurants for several days reduces Salmonella levels, oysters were artificially infected with Salmonella and kept at 4°C for up to 13 days. Direct plate counts of oyster homogenate showed that Salmonella levels within oysters did not decrease during refrigeration. Six different serovars of Salmonella enterica were found in the restaurant oysters, indicating multiple incidences of Salmonella contamination of U.S. oyster stocks. Of the 28 contaminated oysters, 12 (43%) contained a strain of S. enterica serovar Newport that matched by pulsed-field gel electrophoresis a serovar Newport strain seen predominantly in the study of bay oysters performed in 2002. The repeated occurrence of this strain in oyster surveys is concerning, since the strain was resistant to seven antimicrobials tested and thus presents a possible health risk to consumers of raw oysters.

  2. Oceanic forcing of coral reefs.

    Lowe, Ryan J; Falter, James L

    2015-01-01

    Although the oceans play a fundamental role in shaping the distribution and function of coral reefs worldwide, a modern understanding of the complex interactions between ocean and reef processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around coral communities and their influence on nutrient exchange to larger, reef-scale patterns of wave- and tide-driven circulation and their effects on reef water quality and perceived rates of metabolism. We also examine regional-scale drivers of reefs such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of coral reefs.

  3. Overview on artificial reefs in Europe

    Gianna Fabi

    2011-01-01

    Full Text Available Artificial reefs in Europe have been developed over the last 40 yrs. Most of these reefs have been placed in the Mediterranean Sea, but there is an increasing interest on the part of northern European countries. Fish stock enhancement and fishery management are the main purposes of reef construction in the Mediterranean Sea and on the Atlantic coast of the Iberian Peninsula, while nature conservation/restoration, research, and recreation have been the main purposes served in the other European regions to date. Artificial reef deployment falls under some general regulations concerning the protection of the sea against pollution due to the dumping of unsuitable materials. Specific Regional Plans relating to the use of artificial reefs in the marine environment and Guidelines for reef construction have been derived from these general regulations. In spite of recent developments, national and/or regional programs for the deployment of artificial reefs and/or their inclusion in overall management plans for integrated management of coastal zones are in force only in the majority of Mediterranean countries, while only a few projects have, to date, been undertaken in the other European Regions. Moreover, there is a noteworthy lack of plans, in many countries, for the management of the reefs after their deployment.Os recifes artificiais, na Europa, foram desenvolvidos nos últimos 40 anos. A maioria desses recifes foram instalados no Mar Mediterrâneo, mas despertam um interesse crescente por parte dos paises do norte europeu. O incentivo aos estoques pesqueiros e o manejo da pesca são os principais objetivos da construção de recifes no Mar Mediterrâneo e na costa Atlântica da Península Ibérica, enquanto a preservação / recuperação da natureza, a pesquisa e a recreação tem sido os principais objetivos das demais regiões européias até hoje. A implantação de recifes artificiais está submetida a algumas regulamentações básicas quanto

  4. Host population genetic structure and zooxanthellae diversity of two reef-building coral species along the Florida Reef Tract and wider Caribbean

    Baums, I. B.; Johnson, M. E.; Devlin-Durante, M. K.; Miller, M. W.

    2010-12-01

    In preparation for a large-scale coral restoration project, we surveyed host population genetic structure and symbiont diversity of two reef-building corals in four reef zones along the Florida reef tract (FRT). There was no evidence for coral population subdivision along the FRT in Acropora cervicornis or Montastraea faveolata based on microsatellite markers. However, in A. cervicornis, significant genetic differentiation was apparent when extending the analysis to broader scales (Caribbean). Clade diversity of the zooxanthellae differed along the FRT. A. cervicornis harbored mostly clade A with clade D zooxanthellae being prominent in colonies growing inshore and in the mid-channel zones that experience greater temperature fluctuations and receive significant nutrient and sediment input. M. faveolata harbored a more diverse array of symbionts, and variation in symbiont diversity among four habitat zones was more subtle but still significant. Implications of these results are discussed for ongoing restoration and conservation work.

  5. Understanding Reef Flat Sediment Regimes and Hydrodynamics can Inform Erosion Mitigation on Land

    Lida Tenkova Teneva

    2016-01-01

    Full Text Available Coral reefs worldwide are affected by excessive sediment and nutrient delivery from adjacent watersheds. Land cover and land use changes contribute to reef ecosystem degradation, which in turn, diminish many ecosystem services, including coastal protection, recreation, and food provisioning. The objectives of this work were to understand the role of coastal oceanic and biophysical processes in mediating the effects of sedimentation in shallow reef environments, and to assess the efficacy of land-based sediment remediation in the coastal areas near Maunalei reef, Lāna’i Island, Hawai’i. To the best of our knowledge, this was the first study of sediment dynamics on an east-facing (i.e., facing the trade winds reef in the Hawaiian Islands. We developed ridge-to-reef monitoring systems at two paired stream bed-to-reef sites, where one of the reef sites was adjacent to a community stream sediment remediation project. We found that the two reef sites were characterized by different processes that affected the sediment removal rates; the two sites were also exposed to different amounts of sediment runoff. The community stream sediment remediation project appeared to keep at least 77 tonnes of sediment off the reef flat in one wet season. We found that resuspension of sediments on this reef was similar to that on north-facing and south-facing reefs that also are exposed to the trade winds. We posit that sites with slower sediment removal rates due to slower current velocities or high resuspension rates will require more-robust sediment capture systems on land to reduce sediment input rates and maximize potential for reef health recovery. This suggests that interventions such as local sediment remediation and watershed restoration may mitigate sediment delivery to coral reefs, but these interventions are more likely to be effective if they account for how adjacent coastal oceanographic processes distribute, accumulate, or advect sediment away from

  6. Coral Reefs: Beyond Mortality?

    Charles Sheppard

    2000-01-01

    Full Text Available The scale of the collapse of coral reef communities in 1998 following a warming episode (Wilkinson, 2000 was unprecedented, and took many people by surprise. The Indian Ocean was the worst affected with a coral mortality over 75% in many areas such as the Chagos Archipelago (Sheppard, 1999, Seychelles (Spencer et al., 2000 and Maldives (McClanahan, 2000. Several other locations were affected at least as much, with mortality reaching 100% (to the nearest whole number; this is being compiled by various authors (e.g., CORDIO, in press. For example, in the Arabian Gulf, coral mortality is almost total across many large areas of shallow water (Sheppard, unpublished; D. George and D. John, personal communication. The mortality is patchy of course, depending on currents, location inside or outside lagoons, etc., but it is now possible to swim for over 200 m and see not one remaining living coral or soft coral on some previously rich reefs.

  7. Digital reef rugosity estimates coral reef habitat complexity.

    Dustan, Phillip; Doherty, Orla; Pardede, Shinta

    2013-01-01

    Ecological habitats with greater structural complexity contain more species due to increased niche diversity. This is especially apparent on coral reefs where individual coral colonies aggregate to give a reef its morphology, species zonation, and three dimensionality. Structural complexity is classically measured with a reef rugosity index, which is the ratio of a straight line transect to the distance a flexible chain of equal length travels when draped over the reef substrate; yet, other techniques from visual categories to remote sensing have been used to characterize structural complexity at scales from microhabitats to reefscapes. Reef-scale methods either lack quantitative precision or are too time consuming to be routinely practical, while remotely sensed indices are mismatched to the finer scale morphology of coral colonies and reef habitats. In this communication a new digital technique, Digital Reef Rugosity (DRR) is described which utilizes a self-contained water level gauge enabling a diver to quickly and accurately characterize rugosity with non-invasive millimeter scale measurements of coral reef surface height at decimeter intervals along meter scale transects. The precise measurements require very little post-processing and are easily imported into a spreadsheet for statistical analyses and modeling. To assess its applicability we investigated the relationship between DRR and fish community structure at four coral reef sites on Menjangan Island off the northwest corner of Bali, Indonesia and one on mainland Bali to the west of Menjangan Island; our findings show a positive relationship between DRR and fish diversity. Since structural complexity drives key ecological processes on coral reefs, we consider that DRR may become a useful quantitative community-level descriptor to characterize reef complexity.

  8. Perkinsus beihaiensis (Perkinsozoa in oysters of Bahia State, Brazil

    M. S. A. Luz

    2017-08-01

    Full Text Available Abstract This study reports the pathogen Perkinsus beihaiensis in oysters of the genus Crassostrea on the coast of the State of Bahia (Brazil, its prevalence, infection intensity and correlation with salinity. Oysters (n = 240 were collected between October and December 2014 at eight sampling stations between latitudes 13°55'S and 15°42'S. The laboratory procedures included macroscopic analysis, histology, culture in Ray's fluid thioglycollate medium (RFTM, Polymerase Chain Reaction (PCR and DNA sequencing. PCR and sequencing have been used for the genetic identification of oysters as well. Two species of oysters have been identified: Crassostrea rhizophorae and C. brasiliana. In both oyster species P. beihaiensis was the only Perkinsus species detected. In C. rhizophorae, the average prevalence was 82.8% by histology and 65.2% by RFTM. In C. brasiliana, the prevalences were 70.5% and 35.7%, respectively. The higher prevalence of P. beihaiensis in C. rhizophorae was probably influenced by salinity, with which was positively correlated (r> 0.8. In both oysters, P. beihaiensis was located mainly in the gastric epithelium. The infection was generally mild or moderate, without apparent harm to the hosts, but in cases of severe infection, there was hemocytical reaction and tissue disorganization. The generally high prevalence in the region suggests that oysters should be monitored with respect to this pathogen, especially in growing areas.

  9. Anthropogenic impacts on an oyster metapopulation: Pathogen introduction, climate change and responses to natural selection

    David Bushek

    2016-08-01

    Full Text Available Abstract Humans rely on marine ecosystems for a variety of services but often impact these ecosystems directly or indirectly limiting their capacity to provide such services. One growing impact is the emergence of marine disease. We present results from a unique case study examining how oysters, a dominant organism in many coastal bays and estuaries that is often harvested for food, have responded to pathogens influenced by human activities, namely the introduction of novel pathogens. Climate change has enabled a northward spread and establishment of Dermo disease in oysters along the eastern seaboard of North America and human activities inadvertently introduced MSX disease along this same coast. Oysters in Delaware Bay have responded differently to each pathogen, and uniquely to MSX disease by developing a highly resistant baywide population not documented in any other bay. Offspring were produced using parents collected from low or high disease (MSX and Dermo regions of Delaware Bay and exposed in a common garden experiment along with a naïve population from Maine. Results indicated widespread resistance to MSX disease, but not to Dermo disease, across Delaware Bay. One striking result was the demonstration of resilience in the population through its capacity to spread, presumably through larval transport, resistance to MSX disease into portions of the population that have experienced little to no MSX disease pressure themselves. Related studies indicated that larval transport mechanisms allowed widespread dispersal such that the entire metapopulation could acquire a high level of resistance over time if disease resistance is sufficiently heritable. The findings have implications for restoration, management and recovery of diseased populations. Namely, that if left to their own devices, natural selection may find a solution that enables populations to recover from introduced pathogens.

  10. Human enteroviruses in oysters and their overlying waters.

    Goyal, S M; Gerba, C P; Melnick, J L

    1979-03-01

    The presence of enteroviruses in oysters and oyster-harvesting waters of the Texas Gulf coast was monitored over a period of 10 months. Viruses were detected in water and oyster samples obtained from areas both open and closed to shellfish harvesting. Viruses were detected periodically in waters that met current bacteriological standards for shellfish harvesting. No significant statistical relationship was demonstrated between virus concentration in oysters and the bacteriological and physiochemical quality of water and shellfish. Viruses in water were, however, moderately correlated with total coliforms in water and oysters and with fecal coliforms in oysters. Total coliforms in water were realted to total coliforms in sediment were related only to total coliforms in sediment. Among the physiochemical characteristics of water, turbidity was related statistically to the organic matter content of water and to fecal coliforms in water. There was a marked effect of rainfall on the bacteriological quality of water. Of a total of 44 water samples, 26 yielded virus in concentrations from 4 to 167 plaque-forming units per 100-gallon (ca. 378.5-liter) sample. Of a total of 40 pools of 10 to 12 oysters each, virus was found in 14 pools at a concentration of 6 to 224 plaque-forming units per 100 g of oyster meat. On five occasions, virus was found in water samples when no virus could be detected in oysters harvested from the same sites. This study indicates that current bacteriological standards for determining the safety of shellfish and shellfish-growing waters do no reflect the occurrence of enteroviruses.

  11. Black reefs: iron-induced phase shifts on coral reefs

    Wegley Kelly, L.; Barott, K.L.; Dinsdale, E.; Friedlander, A.M.; Nosrat, B.; Obura, D.; Sala, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Williams, G.J.; Willner, D.; Rohwer, F.

    2012-01-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the

  12. Spatial patterns in the condition index of the wild Pacific oyster Crassostrea gigas in a macrotidal coastal ecosystem: Influence of tidal processes and beyond

    Gasmi, Sonia; Bernard, Ismaël; Pouvreau, Stéphane; Maurer, Danièle; Schaal, Gauthier; Ganthy, Florian; Cominassi, Louise; Allain, Gwenhael; Sautour, Benoit; David, Valérie

    2017-01-01

    In macrotidal coastal ecosystems, spatial heterogeneity of the water column properties is induced by both oceanic and continental influences. Hydrodynamic processes generate a land-sea gradient of environmental conditions, affecting the biological performances of sedentary organisms. The aim of the present study is to establish an extensive spatial assessment in the reproductive investment of the wild Pacific oyster Crassostrea gigas in Arcachon Bay. This is done by looking for a relationship between the Lawrence and Scott condition index (LSCI) and two tidal processes: the immersion level (IL) and the local oceanic flushing time (LoFt). The LSCI of C. gigas was assessed, just before gamete release, at 68 sampling stations in Arcachon Bay. Oyster performance was overall low and spatially variable. Significant differences in the LSCI were detected between the outer and inner bay. Oyster reefs located toward the mouth of the bay exhibited high LSCI (between 9 and 11), while oyster reefs located in inner bay, especially in south-eastern part around the Eyre River, had low LSCI (below 6). Linear modelling allowed to highlight significant effects of both tidal processes IL and LoFt on the obtained LSCI gradient. IL, LoFt explained 33% of the spatial variability observed on LSCI (IL = 3%; LoFt = 17%; LoFt + IL: 13%), 6% were attributed to the intra-station variation (ISv). Thus, high IL and rapid LoFt favor a better development of somatic-gonadal volume, probably because of longer feeding time and higher supply of food from the ocean by tide flows. Disentangling the effects of IL and LoFt on LSCI allowed to describe the spatial pattern in 61% of variability not explained by both tidal factors. A residual gradient directed southeast-northwest highlighted that others factors, independent from IL and LoFt seems to hamper inner bay oyster reproductive performance. Consequently, investigating on the ecological functioning (Eyre influences), trophic potential and anthropogenic

  13. Development of Genetic Markers for Triploid Verification of the Pacific Oyster,

    Jung-Ha Kang

    2013-07-01

    Full Text Available The triploid Pacific oyster, which is produced by mating tetraploid and diploid oysters, is favored by the aquaculture industry because of its better flavor and firmer texture, particularly during the summer. However, tetraploid oyster production is not feasible in all oysters; the development of tetraploid oysters is ongoing in some oyster species. Thus, a method for ploidy verification is necessary for this endeavor, in addition to ploidy verification in aquaculture farms and in the natural environment. In this study, a method for ploidy verification of triploid and diploid oysters was developed using multiplex polymerase chain reaction (PCR panels containing primers for molecular microsatellite markers. Two microsatellite multiplex PCR panels consisting of three markers each were developed using previously developed microsatellite markers that were optimized for performance. Both panels were able to verify the ploidy levels of 30 triploid oysters with 100% accuracy, illustrating the utility of microsatellite markers as a tool for verifying the ploidy of individual oysters.

  14. Reef fish communities in the central Red Sea show evidence of asymmetrical fishing pressure

    Kattan, Alexander; Coker, Darren James; Berumen, Michael L.

    2017-01-01

    In order to assess human impacts and develop rational restoration goals for corals reefs, baseline estimates of fish communities are required. In Saudi Arabian waters of the Red Sea, widespread unregulated fishing is thought to have been ongoing for decades, but there is little direct evidence of the impact on reef communities. To contextualize this human influence, reef-associated fish assemblages on offshore reefs in Saudi Arabia and Sudan in the central Red Sea were investigated. These reefs have comparable benthic environments, experience similar oceanographic influences, and are separated by less than 300 km, offering an ideal comparison for identifying potential anthropogenic impacts such as fishing pressure. This is the first study to assess reef fish biomass in both these regions, providing important baselines estimates. We found that biomass of top predators on offshore Sudanese reefs was on average almost three times that measured on comparable reefs in Saudi Arabia. Biomass values from some of the most remote reefs surveyed in Sudan’s far southern region even approach those previously reported in the Northwestern Hawaiian Islands, northern Line Islands, Pitcairn Islands, and other isolated Pacific islands and atolls. The findings suggest that fishing pressure has significantly altered the fish community structure of Saudi Arabian Red Sea reefs, most conspicuously in the form of top predator removal. The results point towards the urgent need for enhanced regulation and enforcement of fishing practices in Saudi Arabia, while making a strong case for protection in the form of no-take marine protected areas to maintain preservation of the relatively intact southern Sudanese Red Sea.

  15. Reef fish communities in the central Red Sea show evidence of asymmetrical fishing pressure

    Kattan, Alexander

    2017-03-09

    In order to assess human impacts and develop rational restoration goals for corals reefs, baseline estimates of fish communities are required. In Saudi Arabian waters of the Red Sea, widespread unregulated fishing is thought to have been ongoing for decades, but there is little direct evidence of the impact on reef communities. To contextualize this human influence, reef-associated fish assemblages on offshore reefs in Saudi Arabia and Sudan in the central Red Sea were investigated. These reefs have comparable benthic environments, experience similar oceanographic influences, and are separated by less than 300 km, offering an ideal comparison for identifying potential anthropogenic impacts such as fishing pressure. This is the first study to assess reef fish biomass in both these regions, providing important baselines estimates. We found that biomass of top predators on offshore Sudanese reefs was on average almost three times that measured on comparable reefs in Saudi Arabia. Biomass values from some of the most remote reefs surveyed in Sudan’s far southern region even approach those previously reported in the Northwestern Hawaiian Islands, northern Line Islands, Pitcairn Islands, and other isolated Pacific islands and atolls. The findings suggest that fishing pressure has significantly altered the fish community structure of Saudi Arabian Red Sea reefs, most conspicuously in the form of top predator removal. The results point towards the urgent need for enhanced regulation and enforcement of fishing practices in Saudi Arabia, while making a strong case for protection in the form of no-take marine protected areas to maintain preservation of the relatively intact southern Sudanese Red Sea.

  16. Coral biodiversity and bioconstruction in the northern sector of the Mesoamerican Reef system

    Fabian Alejandro Rodriguez-Zaragoza

    2015-03-01

    Full Text Available As the impact of anthropogenic activity and climate change continue to accelerate rates of degradation on Caribbean coral reefs, conservation and restoration faces greater challenges. At at this stage, of particular importance in coral reefs, is to recognize and to understand the structural spatial patterns of benthic assemblages. We developed a field-based framework of a Caribbean reefscape benthic structure by using hermatypic corals as an indicator group of global biodiversity and bio-construction patterns in eleven reefs of the northern sector of the Mesoamerican Barrier Reef System (nsMBRS. Four hundred and seventy four video-transects (50 m long by 0.4 m wide were performed throughout a gradient of reef complexity from north to south (∼400 km to identify coral species, families and ensembles of corals. Composition and abundance of species, families and ensembles showed differences among reefs. In the northern zone, the reefs had shallow, partial reef developments with low diversities, dominated by Acropora palmata, Siderastrea spp., Pseudodiploria strigosa and Agaricia tenuifolia. In the central and southern zones, reefs presented extensive developments, high habitat heterogeneity, and the greatest diversity and dominance of Orbicella annularis and Orbicella faveolata. These two species determined the structure and diversity of corals in the central and southern zones of the nsMBRS and their bio-construction in these zones is unique in the Caribbean. Their abundance and distribution depended on the reef habitat area, topographic complexity and species richness. Orbicella species complex were crucial for maintaining the biodiversity and bio-construction of the central and southern zones while A. palmata in the northern zones of the nsMBRS.

  17. Comparison of methods for detection of norovirus in oysters

    Schultz, Anna Charlotte; Saadbye, Peter; Hoorfar, Jeffrey

    2007-01-01

    a successful detection it is of great importance to remove the tissue inhibitors during the viral RNA extraction. To select the most efficient extraction procedure of oysters we have compared four protocols. A pool of digestive gland material from oyster samples was divided into 1.5 g portions and spiked...... with I 0-fold dilutions of human faecal samples containing norovirus genogroup II. The samples were tested on three different occasions using four different sample treatment protocols. The protocols were assessed with regard to their ability to recover viral RNA and detect norovirus in spiked oysters...

  18. Black reefs: iron-induced phase shifts on coral reefs.

    Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest

    2012-03-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low coral and crustose coralline algal cover and are call black reefs because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black reefs. Comparative surveys show that the live coral cover was reduced from 40 to 60% to reefs on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km(2)). The phase shift occurs rapidly; the Kingman black reef formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black reef site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black reef-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that corals were killed by black reef rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to coral reefs in iron-limited regions.

  19. State of the coralline reefs

    Garzon Ferreira, Jaime; Rodriguez Ramirez, Alberto; Bejarano Chavarro, Sonia; Navas Camacho, Raul; Reyes Nivia, Catalina

    2002-01-01

    A diagnosis is made based primarily on the data obtained inside the national system of monitoring of coralline reefs in Colombia, under the coordination of the INVEMAR and with the support of several institutions. The paper does a diagnostic of the covering of the reef substrate, bleaching and coralline illnesses, wealth and abundance of fishes among other topics

  20. Human activities threaten coral reefs

    Tveitdal, Svein; Bjoerke, Aake

    2002-01-01

    Research indicates that 58 per cent of the coral reefs of the world are threatened by human activities. Pollution and global heating represent some of the threats. Coral reefs just beneath the surface of the sea are very sensitive to temperature changes. Since 1979, mass death of coral reefs has been reported increasingly often. More than 1000 marine species live in the coral reefs, among these are one fourth of all marine species of fish. It is imperative that the coral reefs be preserved, as coastal communities all over the world depend on them as sources of food and as they are the raw materials for important medicines. The article discusses the threats to the coral reefs in general and does not single out any particular energy-related activity as the principal threat. For instance, the El-Nino phenomenon of the Pacific Ocean is probably involved in mass death of coral reefs and in the North Sea large parts of deep-water reefs have been crushed by heavy beam trawlers fishing for bottom fish

  1. Synergistic impacts of global warming on the resilience of coral reefs

    Bozec, Yves-Marie; Mumby, Peter J.

    2015-01-01

    Recent epizootics have removed important functional species from Caribbean coral reefs and left communities vulnerable to alternative attractors. Global warming will impact reefs further through two mechanisms. A chronic mechanism reduces coral calcification, which can result in depressed somatic growth. An acute mechanism, coral bleaching, causes extreme mortality when sea temperatures become anomalously high. We ask how these two mechanisms interact in driving future reef state (coral cover) and resilience (the probability of a reef remaining within a coral attractor). We find that acute mechanisms have the greatest impact overall, but the nature of the interaction with chronic stress depends on the metric considered. Chronic and acute stress act additively on reef state but form a strong synergy when influencing resilience by intensifying a regime shift. Chronic stress increases the size of the algal basin of attraction (at the expense of the coral basin), whereas coral bleaching pushes the system closer to the algal attractor. Resilience can change faster—and earlier—than a change in reef state. Therefore, we caution against basing management solely on measures of reef state because a loss of resilience can go unnoticed for many years and then become disproportionately more difficult to restore.

  2. Evidence for protection of targeted reef fish on the largest marine reserve in the Caribbean.

    Pina-Amargós, Fabián; González-Sansón, Gaspar; Martín-Blanco, Félix; Valdivia, Abel

    2014-01-01

    Marine reserves can restore fish abundance and diversity in areas impacted by overfishing, but the effectiveness of reserves in developing countries where resources for enforcement are limited, have seldom been evaluated. Here we assess whether the establishment in 1996 of the largest marine reserve in the Caribbean, Gardens of the Queen in Cuba, has had a positive effect on the abundance of commercially valuable reef fish species in relation to neighboring unprotected areas. We surveyed 25 sites, including two reef habitats (reef crest and reef slope), inside and outside the marine reserve, on five different months, and over a one-and-a-half year period. Densities of the ten most frequent, highly targeted, and relatively large fish species showed a significant variability across the archipelago for both reef habitats that depended on the month of survey. These ten species showed a tendency towards higher abundance inside the reserve in both reef habitats for most months during the study. Average fish densities pooled by protection level, however, showed that five out of these ten species were at least two-fold significantly higher inside than outside the reserve at one or both reef habitats. Supporting evidence from previously published studies in the area indicates that habitat complexity and major benthic communities were similar inside and outside the reserve, while fishing pressure appeared to be homogeneous across the archipelago before reserve establishment. Although poaching may occur within the reserve, especially at the boundaries, effective protection from fishing was the most plausible explanation for the patterns observed.

  3. 40 CFR 230.44 - Coral reefs.

    2010-07-01

    ... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Coral reefs. 230.44 Section 230.44... Aquatic Sites § 230.44 Coral reefs. (a) Coral reefs consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the reef. (b) Possible loss of values: The discharge of dredged or...

  4. Coal ash artificial reef demonstration

    Livingston, R.J.; Brendel, G.F.; Bruzek, D.A.

    1991-01-01

    This experimental project evaluated the use of coal ash to construct artificial reefs. An artificial reef consisting of approximately 33 tons of cement-stabilized coal ash blocks was constructed in approximately 20 feet of water in the Gulf of Mexico approximately 9.3 miles west of Cedar Key, Florida. The project objectives were: (1) demonstrate that a durable coal ash/cement block can be manufactured by commercial block-making machines for use in artificial reefs, and (2) evaluate the possibility that a physically stable and environmentally acceptable coal ash/cement block reef can be constructed as a means of expanding recreational and commercial fisheries. The reef was constructed in February 1988 and biological surveys were made at monthly intervals from May 1988 to April 1989. The project provided information regarding: Development of an optimum design mix, block production and reef construction, chemical composition of block leachate, biological colonization of the reef, potential concentration of metals in the food web associated with the reef, acute bioassays (96-hour LC 50 ). The Cedar Key reef was found to be a habitat that was associated with a relatively rich assemblage of plants and animals. The reef did not appear to be a major source of heavy metals to species at various levels of biological organization. GAI Consultants, Inc (GAI) of Monroeville, Pennsylvania was the prime consultant for the project. The biological monitoring surveys and evaluations were performed by Environmental Planning and Analysis, Inc. of Tallahassee, Florida. The chemical analyses of biological organisms and bioassay elutriates were performed by Savannah Laboratories of Tallahassee, Florida. Florida Power Corporation of St. Petersburg, Florida sponsored the project and supplied ash from their Crystal River Energy Complex

  5. Episodic recruitment of the rock oyster Saccostrea cucullata (Born ...

    Episodic recruitment of the rock oyster Saccostrea cucullata (Born, 1778) on the Transkei coast. ... This single recruitment, which is 6 to 31 times the annual mean recorded over the last 6 to 7 years, represents 5 ... AJOL African Journals Online.

  6. The Edibility and Cultivation of the Oyster Mushroom.

    Brenneman, James; Guttman, Mark C.

    1994-01-01

    Describes an enjoyable and fascinating experience that involves the cultivation of oyster mushrooms. By allowing students to participate in this process, the students are able to better understand the biology and utility of fungi. (ZWH)

  7. Phylogeny and Species Diversity of Gulf of California Oysters

    U.S. Environmental Protection Agency — Dataset of DNA sequence data from two mitochondrial loci (COI and 16S) used to infer the phylogeny of oysters in the genus Ostrea along the Pacific coast of North...

  8. Oyster radiation sensitivity; Sensibilidade de ostras a radiacao

    Marchese, Sandra R.M. [Centro Tecnologico da Marinha em Sao Paulo (CTMSP), SP (Brazil); Mastro, Nelida L. del [Instituto de Pesquisas Energeticas e Nucleares (IPEN), Sao Paulo, SP (Brazil)

    1996-07-01

    Various food products like oysters, crabs and shrimps have been described as possible Vibrio spp. transmitting agents. Seafood irradiation is been presented as an alternative among the different public health intervention measures to control food borne diseases. The objective of this work was to establish, firstly, the radioresistance of Crassostrea brasiliana oysters. The oysters were irradiated with Co-60 radiation with doses of 0, 1.5,3 and 6 kGy. Survival curves a function of time showed that 100% of samples irradiated with 3 kGy survived at least 6 days; among those irradiated with 6 kGy, 100% survived 3 days. These results are encouraging since a dose of 2 kGy is already effective in diminishing oyster bioburden. (author)

  9. Cadmium uptake in oyster isognomon alatus under laboratory condition

    Katayon Saed; Ahmad Ismail; Missri Kusnan; Hishamuddin Omar

    1999-01-01

    The uptake of cadmium in Flat tree oyster Isognomon alatus was investigated under controlled laboratory conditions for two weeks. Oysters were exposed to 100 μg 1'-1 cadmium and the accumulation of cadmium in the tissues was measured for every two days. Soft tissues of oyster were digested in concentrated acid and cadmium concentrations were determined by using Atomic Absorption Spectrophotometer. The accumulation of cadmium in the soft tissues of oysters was increased during the first six days from 0.73 μg g- 1 to 10.77 μg g'-1, and remaining constant for four days at average level of 10.96 μg g'-1. The Cl concentrations was increased to 32.70 μg g'-1 until the end of experiment. There was no sign of cadmium accumulation approaching saturation for the period of exposure. (author)

  10. Carbon And Nitrogen Requirements For The Cultivation Of Oyster ...

    Carbon And Nitrogen Requirements For The Cultivation Of Oyster Mushroom ... It was found that under these experimental conditions, the carbon compounds supported growth except ribose, starch and dextrin. ... HOW TO USE AJOL.

  11. Length-weight relationship of Giant Oyster, Crassostrea gyphoides (Schlotheim)

    Chatterji, A.; Ansari, Z.A.; Ingole, B.S.; Parulekar, A.H.

    Relationship between shell length and total weight, shell weight and meat weight of giant oyster, Crassostrea gryphoides revealed that the growth of these parameters is very fast and significant. It indicates the suitability of the species concerned...

  12. IS COPPER REQUIRED FOR EASTERN OYSTER SETTING AND METAMORPHOSIS?

    Recent field research with eastern oysters demonstrated higher defense activities, including hemocyte numbers, locomotion and bactericidal ability, associated with locations exhibiting relatively high contamination. Copper and zinc, found in high concentrations in tissues of oyst...

  13. Molecular and Antibacterial Profile of Edible Oyster Mushrooms ...

    2012r

    2014-09-24

    Sep 24, 2014 ... Phenol/Chloroform DNA extraction protocol and the DNA was ... DNA from oyster mushroom fermentation broth, mycelia or fruiting bodies. .... Sample preparation: The different strains of Pleurotus were obtained in test- tubes.

  14. Virus, protozoa and organic compounds decay in depurated oysters.

    Souza, Doris Sobral Marques; Piazza, Rômi Sharon; Pilotto, Mariana Rangel; do Nascimento, Mariana de Almeida; Moresco, Vanessa; Taniguchi, Satie; Leal, Diego Averaldo Guiguet; Schmidt, Éder der Carlos; Cargin-Ferreira, Eduardo; Bícego, Márcia Caruso; Sasaki, Silvio Tarou; Montone, Rosalinda Carmela; de Araujo, Rafael Alves; Franco, Regina Maura Bueno; Bouzon, Zenilda Laurita; Bainy, Afonso Celso Dias; Barardi, Célia Regina Monte

    2013-11-01

    (1) Evaluate the dynamic of the depuration process of Crassostrea gigas oysters using different ultraviolet doses with different amounts of contaminants (virus, protozoa and organic contaminants) and (2) investigate the morphological changes in the oysters' tissues produced by the depuration procedures. The oysters were allocated in sites with different degrees of contamination and analyzed after 14 days. Some animals were used as positive controls by artificial bioaccumulation with HAdV2 and MNV1 and subjected to depuration assays using UV lamps (18 or 36 W) for 168 h. The following pollutants were researched in the naturally contaminated oysters, oysters after 14 days in sites and oysters during the depuration processes: virus (HAdV, HAV, HuNoV GI/GII and JCPyV), by (RT) qPCR; protozoa (Cryptosporidium and Giardia species), by immunomagnetic separation and immunofluorescence; and organic compounds (AHs, PAHs, LABs, PCBs and organochlorine pesticides-OCs), by chromatography. Changes in the oysters' tissues produced by the depuration processes were also evaluated using histochemical analysis by light microscopy. In the artificially bioaccumulated oysters, only HAdV2 and MNV1 were investigated by (RT) qPCR before the depuration procedures and after 96 and 168 h of these procedures. At 14 days post-allocation, HAdV was found in all the sites (6.2 × 105 to 4.4 × 107 GC g(-1)), and Giardia species in only one site. Levels of PCBs and OCs in the oyster's tissues were below the detection limit for all samples. AHs (3.5 to 4.4 μg g(-1)), PAHs (11 to 191 ng g(-1)) and LABs (57 to 751 ng g(-1)) were detected in the samples from 3 sites. During the depuration assays, we found HAdV, Giardia and Cryptosporidium species until 168 h, independent of UV treatment. AHs, PAHs and LABs were found also after 168 h of depuration (36 W and without UV lamp). The depuration procedures did not produce changes in the oysters' tissues. In the artificially contaminated and depurated

  15. Interim restorations.

    Gratton, David G; Aquilino, Steven A

    2004-04-01

    Interim restorations are a critical component of fixed prosthodontic treatment, biologically and biomechanically. Interim restoration serves an important diagnostic role as a functional and esthetic try-in and as a blueprint for the design of the definitive prosthesis. When selecting materials for any interim restoration, clinicians must consider physical properties, handling properties, patient acceptance, and material cost. Although no single material meets all the requirements and material classification alone of a given product is not a predictor of clinical performance, bis-acryl materials are typically best suited to single-unit restorations, and poly(methylmethacrylate) interim materials are generally ideal for multi-unit, complex, long-term, interim fixed prostheses. As with most dental procedures, the technique used for fabrication has a greater effect on the final result than the specific material chosen.

  16. Restoring forests

    Jacobs, Douglass F.; Oliet, Juan A.; Aronson, James

    2015-01-01

    of land requiring restoration implies the need for spatial prioritization of restoration efforts according to cost-benefit analyses that include ecological risks. To design resistant and resilient ecosystems that can adapt to emerging circumstances, an adaptive management approach is needed. Global change......, in particular, imparts a high degree of uncertainty about the future ecological and societal conditions of forest ecosystems to be restored, as well as their desired goods and services. We must also reconsider the suite of species incorporated into restoration with the aim of moving toward more stress resistant...... and competitive combinations in the longer term. Non-native species may serve an important role under some circumstances, e.g., to facilitate reintroduction of native species. Propagation and field establishment techniques must promote survival through seedling stress resistance and site preparation. An improved...

  17. High-pressure treatment for shelf-life extension and quality improvement of oysters cooked in a traditional Taiwanese oyster omelet.

    Lai, Kung-Ming; Chi, Hsin-Yi; Hsu, Kuo-Chiang

    2010-01-01

    Whole oysters were processed using high-pressure (HP) treatment at 250 and 300 MPa for 0 to 10 min and stored at 4 degrees Celsius for up to 28 days. HP-treated oysters and untreated oysters were evaluated for lipid oxidation, growth of microorganisms, and sensory characteristics after cooking at 160 degrees Celsius for 90 s. Microbial counts after HP treatment revealed that the bacterial load was initially reduced at all pressures. HP-treated oysters had significantly higher pH and moisture (P oysters during storage. HP treatment increased lipid oxidation with unpleasant odor during storage compared with the control. HP treatment decreased redness but did not significantly affect the brightness and yellowness of cooked oysters. From tests of mechanical properties, 300 MPa-treated oysters after cooking had significantly increased toughness as measured by cutting force. HP-treated oysters after cooking received higher quality scores than did the control during the storage trial. Results indicated that 300 MPa for 2 min is the optimum HP treatment that results in oysters most acceptable for oyster omelets during storage at 4 degrees Celsius, and this treatment may extend the shelf life of these oysters to 21 days.

  18. Reefs for the future: Resilience of coral reefs in the main Hawaiian Islands

    National Oceanic and Atmospheric Administration, Department of Commerce — Declining health of coral reef ecosystems led scientists to search for factors that support reef resilience: the ability of reefs to resist and recover from...

  19. National survey of foodborne viruses in Australian oysters at production.

    Torok, Valeria; Hodgson, Kate; McLeod, Catherine; Tan, Jessica; Malhi, Navreet; Turnbull, Alison

    2018-02-01

    Internationally human enteric viruses, such as norovirus (NoV) and hepatitis A virus (HAV), are frequently associated with shellfish related foodborne disease outbreaks, and it has been suggested that acceptable NoV limits based on end-point testing be established for this high risk food group. Currently, shellfish safety is generally managed through the use of indicators of faecal contamination. Between July 2014 and August 2015, a national prevalence survey for NoV and HAV was done in Australian oysters suitable for harvest. Two sampling rounds were undertaken to determine baseline levels of these viruses. Commercial Australian growing areas, represented by 33 oyster production regions in New South Wales, South Australia, Tasmania and Queensland, were included in the survey. A total of 149 and 148 samples were collected during round one and two of sampling, respectively, and tested for NoV and HAV by quantitative RT-PCR. NoV and HAV were not detected in oysters collected in either sampling round, indicating an estimated prevalence for these viruses in Australian oysters of oysters was consistent with epidemiological evidence, with no oyster-related foodborne viral illness reported during the survey period. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Copper and zinc contamination in oysters: subcellular distribution and detoxification.

    Wang, Wen-Xiong; Yang, Yubo; Guo, Xiaoyu; He, Mei; Guo, Feng; Ke, Caihuan

    2011-08-01

    Metal pollution levels in estuarine and coastal environments have been widely reported, but few documented reports exist of severe contamination in specific environments. Here, we report on a metal-contaminated estuary in Fujian Province, China, in which blue oysters (Crassostrea hongkongensis) and green oysters (Crassostrea angulata) were discovered to be contaminated with Cu and other metals. Extraordinarily high metal concentrations were found in the oysters collected from the estuary. Comparison with historical data suggests that the estuary has recently been contaminated with Cr, Cu, Ni, and Zn. Metal concentrations in blue oysters were as high as 1.4 and 2.4% of whole-body tissue dry wt for Cu and Zn, respectively. Cellular debris was the main subcellular fraction binding the metals, but metal-rich granules were important for Cr, Ni, and Pb. With increasing Cu accumulation, its partitioning into the cytosolic proteins decreased. In contrast, metallothionein-like proteins increased their importance in binding with Zn as tissue concentrations of Zn increased. In the most severely contaminated oysters, only a negligible fraction of their Cu and Zn was bound with the metal-sensitive fraction, which may explain the survival of oysters in such contaminated environments. Copyright © 2011 SETAC.

  1. Raw oysters can be a risk for infections

    Regine Helena Silva dos Fernandes Vieira

    Full Text Available The aims of this study were to count and identify sucrose positive and negative vibrios isolated from cultivated Crassostrea rhizophorae oysters during their growing cycle. Every month for 12 months, 10 to 18 oysters were collected for study. Collections occurred at the Center for Studies of Coastal Aquaculture (CSCA, which is associated with the Institute of Marine Science, Labomar, located in Euzebio, Ceará, Brazil. Approximately 150 oysters and their intervalvular liquor were studied. Vibrio Standard Plates Counts (SPC from oyster meat and their intervalvular liquor varied from 25 to 59,000,000 CFU/g. For most of the 12 months of the oysters' life, it was possible to identify Vibrio parahaemolyticus. Vibrio carchariae was identified in four collections. Among other isolated species, the most important, considering public health risks, was V. vulnificus, although only one strain was confirmed. We concluded that retail purchased oysters should never be eaten raw or undercooked because many species of the genus Vibrio are known to be pathogenic to humans and live naturally on and in shellfish throughout their life cycle.

  2. Biodiversity and food web indicators of community recovery in intertidal shellfish reefs

    Christianen, M.J.A.; Heide, van der T.; Holthuijsen, S.J.; Reijden, van der K.J.; Borst, A.C.W.; Olff, H.

    2017-01-01

    In conservation strategies of marine ecosystems, priority is given to habitat-structuring foundation species (e.g. seagrasses, mangroves and reef-building corals, shellfish) with the implicit goal to protect or restore associated communities and their interactions. However, the number and accuracy

  3. Biodiversity and food web indicators of community recovery in intertidal shellfish reefs

    Christianen, M.J.A.; van der Heide, T.; Holthuijsen, S.J.; van der Reijden, K.J.; Borst, A.C.W.; Olff, H.

    2017-01-01

    In conservation strategies of marine ecosystems, priority is given to habitat-structuring foundation species (e.g.seagrasses, mangroves and reef-building corals, shellfish) with the implicit goal to protect or restore associatedcommunities and their interactions. However, the number and accuracy of

  4. Biodiversity and food web indicators of community recovery in intertidal shellfish reefs

    Christianen, M.J.A.; van der Heide, T.; Holthuijsen, S.J.; van der Reijden, K.J.; Borst, A.C.W.; Olff, H.

    In conservation strategies of marine ecosystems, priority is given to habitat-structuring foundation species (e.g. seagrasses, mangroves and reef-building corals, shellfish) with the implicit goal to protect or restore associated communities and their interactions. However, the number and accuracy

  5. Mesopredator trophodynamics on thermally stressed coral reefs

    Hempson, Tessa N.; Graham, Nicholas A. J.; MacNeil, M. Aaron; Hoey, Andrew S.; Almany, Glenn R.

    2018-03-01

    Ecosystems are becoming vastly modified through disturbance. In coral reef ecosystems, the differential susceptibility of coral taxa to climate-driven bleaching is predicted to shift coral assemblages towards reefs with an increased relative abundance of taxa with high thermal tolerance. Many thermally tolerant coral species are characterised by low structural complexity, with reduced habitat niche space for the small-bodied coral reef fishes on which piscivorous mesopredators feed. This study used a patch reef array to investigate the potential impacts of climate-driven shifts in coral assemblages on the trophodynamics of reef mesopredators and their prey communities. The `tolerant' reef treatment consisted only of coral taxa of low susceptibility to bleaching, while `vulnerable' reefs included species of moderate to high thermal vulnerability. `Vulnerable' reefs had higher structural complexity, and the fish assemblages that established on these reefs over 18 months had higher species diversity, abundance and biomass than those on `tolerant' reefs. Fish assemblages on `tolerant' reefs were also more strongly influenced by the introduction of a mesopredator ( Cephalopholis boenak). Mesopredators on `tolerant' reefs had lower lipid content in their muscle tissue by the end of the 6-week experiment. Such sublethal energetic costs can compromise growth, fecundity, and survivorship, resulting in unexpected population declines in long-lived mesopredators. This study provides valuable insight into the altered trophodynamics of future coral reef ecosystems, highlighting the potentially increased vulnerability of reef fish assemblages to predation as reef structure declines, and the cost of changing prey availability on mesopredator condition.

  6. Global microbialization of coral reefs.

    Haas, Andreas F; Fairoz, Mohamed F M; Kelly, Linda W; Nelson, Craig E; Dinsdale, Elizabeth A; Edwards, Robert A; Giles, Steve; Hatay, Mark; Hisakawa, Nao; Knowles, Ben; Lim, Yan Wei; Maughan, Heather; Pantos, Olga; Roach, Ty N F; Sanchez, Savannah E; Silveira, Cynthia B; Sandin, Stuart; Smith, Jennifer E; Rohwer, Forest

    2016-04-25

    Microbialization refers to the observed shift in ecosystem trophic structure towards higher microbial biomass and energy use. On coral reefs, the proximal causes of microbialization are overfishing and eutrophication, both of which facilitate enhanced growth of fleshy algae, conferring a competitive advantage over calcifying corals and coralline algae. The proposed mechanism for this competitive advantage is the DDAM positive feedback loop (dissolved organic carbon (DOC), disease, algae, microorganism), where DOC released by ungrazed fleshy algae supports copiotrophic, potentially pathogenic bacterial communities, ultimately harming corals and maintaining algal competitive dominance. Using an unprecedented data set of >400 samples from 60 coral reef sites, we show that the central DDAM predictions are consistent across three ocean basins. Reef algal cover is positively correlated with lower concentrations of DOC and higher microbial abundances. On turf and fleshy macroalgal-rich reefs, higher relative abundances of copiotrophic microbial taxa were identified. These microbial communities shift their metabolic potential for carbohydrate degradation from the more energy efficient Embden-Meyerhof-Parnas pathway on coral-dominated reefs to the less efficient Entner-Doudoroff and pentose phosphate pathways on algal-dominated reefs. This 'yield-to-power' switch by microorganism directly threatens reefs via increased hypoxia and greater CO2 release from the microbial respiration of DOC.

  7. DIFFERENTIAL EFFECTS OF OYSTER (CRASSOSTREA VIRGINICA) DEFENSES ON CLINICAL AND ENVIRONMENTAL ISOLATES OF VIBRIO PARAHEMOLYTICUS

    Three clinical (2030, 2062, and 2107) and three environmental (1094, 1163, and ATCC 17802) isolates of Vibrio parahaemolyticus were exposed to hemocytes and plasma collected from oysters (Crassostrea virginica) to determine their susceptibility to putative oyster defenses. Clinic...

  8. Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (Pacific Northwest), Pacific Oyster

    1988-09-01

    are provided by Galtsoff (1964). Pho- The germinal vesicle is eccentricall, tographs of C. ia larval develop- located within the nucleolus . ment at vari... composition to cultures, and together with high tem- which oysters are exposed (Grave 1916; peratures may cause oyster mortality Morse 1944). (Lipovsky...setting in oyster. Bull. Jap. Soc. Sci. Fish. European and American oysters: 43(9): 1069-1076. response to surface chemistry versus waterborne

  9. Effect of storage on the quality of purified live Pacific and Sydney rock oysters

    Bird, P; Arnold, G; Holliday, J; Boronovshy, A

    1992-01-01

    In December, 1990, the N.S.W. Minister for Agriculture and Rural Affairs removed the Pacific oyster (Crassostrea gigas) from the noxious fish list for the Port Stephens area, permitting it's cultivation. As Port Stephens Pacific oysters are grown intertidally, similar to Sydney rock oysters (Saccostrea commercialis) there was a belief that they may have different storage requirements to overseas Pacific oysters which are cultivated in deep water exclusively. Consequently, the keeping quality ...

  10. First isolation of Nocardia crassostreae from Pacific oysters (Crassostrea gigas) in Europe

    Engelsma, M.Y.; Roozenburg, I.; Joly, J.P.

    2008-01-01

    In summer 2006 an extensive mortality of Pacific oysters Crassostrea gigas occurred in Lake Grevelingen, the Netherlands. A sample of Pacific oysters was investigated for the presence of shellfish pathogens as potential causes of the mortality. Yellow-green lesions were observed in several oysters

  11. 21 CFR 161.30 - Declaration of quantity of contents on labels for canned oysters.

    2010-04-01

    ... canned oysters. 161.30 Section 161.30 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH....30 Declaration of quantity of contents on labels for canned oysters. (a) For many years packers of canned oysters in the Gulf area of the United States have labeled their output with a declaration of the...

  12. Isolation of Vibrio cholerae serotype O1 from the eastern oyster, Crassostrea virginica.

    Hood, M A; Ness, G E; Rodrick, G E

    1981-01-01

    Two strains of Vibrio cholerae serotype O1 Inaba were isolated from eastern oysters, Crassostrea virginica, collected from estuarine waters in Florida during April 1980. The oyster meats and waters from which the oysters were collected had low fecal coliform counts, and the area had no prior evidence of sewage contamination. PMID:7235700

  13. Detection of hepatitis A virus and bacterial contamination in raw oysters in Thailand.

    Kittigul, Leera; Pombubpa, Kannika; Sukonthalux, Suntharee; Rattanatham, Tippawan; Utrarachkij, Fuangfa; Diraphat, Pornphan

    2010-01-01

    This study was conducted to determine the presence of hepatitis A virus (HAV) in raw oysters (Crassostrea belcheri) using a virus concentration method and reverse transcription-nested polymerase chain reaction (RT-nested PCR). A total of 220 oyster samples were collected from oyster farms and local markets in Thailand. HAV was found in three oyster samples. Nested PCR products of HAV detected in oysters were characterized further by DNA sequencing of the VP1/2A region and subjected to phylogenetic analysis. All HAV sequences (168 basepairs) were associated with human HAV subgenotype IB (GIB). Fecal coliforms and Escherichia coli were determined using the multiple tube fermentation method, to assess the microbiological quality of collected oysters. Among oyster samples tested, 65% had fecal coliforms higher than the standard level for raw shellfish [oyster samples (85%) were contaminated with E. coli in the range of 3.0-4.6 x 10(4) MPN/g. One oyster sample with an acceptable level of fecal coliforms contained HAV GIB. E. coli was found in all HAV-positive oyster samples. The results suggest a significant presence of HAV and bacterial indicators of fecal contamination in raw oysters, which are a health risk for consumers and a source of gastrointestinal illness. Enteric viruses should also be tested to assess the microbiological quality of oysters.

  14. PARASITIC AND SYMBIOTIC FAUNA INHABITING OYSTERS (CRASSOSTREA VIRGINICA) SAMPLED FROM THE CALOOSAHATCHEE ESTUARY, FL

    Oysters, Crassostrea virginica, inhabiting 5 sites in the Caloosahatchee River estuary were studied over a 13 month period to determine the suitability of oyster habitat in relation to their health and condition. Histological examination of 650 oysters (10 animals per station per...

  15. Bacteriological quality of fresh and smoke-dried oysters sold in ...

    Bacterial isolates found in fresh oyster were Klebsiella sp. Escherichia sp., Proteus mirabilis, Citrobacter sp., Micrococcus sp., Bacillus sp., Staphylococccus sp. and Serratia sp. while E. coli, Streptococcus sp., Staphylococcus sp. and B. cereus predominated in dried oysters. The oyster meats did not meet the standards of ...

  16. Benefits of investing in ecosystem restoration.

    DE Groot, Rudolf S; Blignaut, James; VAN DER Ploeg, Sander; Aronson, James; Elmqvist, Thomas; Farley, Joshua

    2013-12-01

    Measures aimed at conservation or restoration of ecosystems are often seen as net-cost projects by governments and businesses because they are based on incomplete and often faulty cost-benefit analyses. After screening over 200 studies, we examined the costs (94 studies) and benefits (225 studies) of ecosystem restoration projects that had sufficient reliable data in 9 different biomes ranging from coral reefs to tropical forests. Costs included capital investment and maintenance of the restoration project, and benefits were based on the monetary value of the total bundle of ecosystem services provided by the restored ecosystem. Assuming restoration is always imperfect and benefits attain only 75% of the maximum value of the reference systems over 20 years, we calculated the net present value at the social discount rates of 2% and 8%. We also conducted 2 threshold cum sensitivity analyses. Benefit-cost ratios ranged from about 0.05:1 (coral reefs and coastal systems, worst-case scenario) to as much as 35:1 (grasslands, best-case scenario). Our results provide only partial estimates of benefits at one point in time and reflect the lower limit of the welfare benefits of ecosystem restoration because both scarcity of and demand for ecosystem services is increasing and new benefits of natural ecosystems and biological diversity are being discovered. Nonetheless, when accounting for even the incomplete range of known benefits through the use of static estimates that fail to capture rising values, the majority of the restoration projects we analyzed provided net benefits and should be considered not only as profitable but also as high-yielding investments. Beneficios de Invertir en la Restauración de Ecosistemas. © 2013 Society for Conservation Biology.

  17. Tortugas Reef Fish Census (CRCP)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a long term data set collecting visual census transect data on reef fishes at staions located at Rileys Hump, Tortugas South Ecological Reservee.

  18. Carrying capacity of coral reefs

    Wafar, M.V.M.

    The sustainable yield of a commercially exploited fishery is assessed by the biological and environmental factors (including fishing effort). These parameters with a reef are vastly diverse-size, location, species diversity, productivity type...

  19. Coral Reef Protection Implementation Plan

    Lobel, Lisa

    2000-01-01

    This document identify policies and actions to implement the Department of Defense's responsibilities under Executive Order 13089 on Coral Reef Protection, and are a requirement of the interim Task...

  20. Oyster reproduction is affected by exposure to polystyrene microplastics

    Sussarellu, Rossana; Suquet, Marc; Thomas, Yoann; Lambert, Christophe; Fabioux, Caroline; Pernet, Marie Eve Julie; Le Goïc, Nelly; Quillien, Virgile; Mingant, Christian; Epelboin, Yanouk; Corporeau, Charlotte; Guyomarch, Julien; Robbens, Johan; Paul-Pont, Ika; Soudant, Philippe; Huvet, Arnaud

    2016-01-01

    Plastics are persistent synthetic polymers that accumulate as waste in the marine environment. Microplastic (MP) particles are derived from the breakdown of larger debris or can enter the environment as microscopic fragments. Because filter-feeder organisms ingest MP while feeding, they are likely to be impacted by MP pollution. To assess the impact of polystyrene microspheres (micro-PS) on the physiology of the Pacific oyster, adult oysters were experimentally exposed to virgin micro-PS (2 and 6 µm in diameter; 0.023 mg·L−1) for 2 mo during a reproductive cycle. Effects were investigated on ecophysiological parameters; cellular, transcriptomic, and proteomic responses; fecundity; and offspring development. Oysters preferentially ingested the 6-µm micro-PS over the 2-µm-diameter particles. Consumption of microalgae and absorption efficiency were significantly higher in exposed oysters, suggesting compensatory and physical effects on both digestive parameters. After 2 mo, exposed oysters had significant decreases in oocyte number (−38%), diameter (−5%), and sperm velocity (−23%). The D-larval yield and larval development of offspring derived from exposed parents decreased by 41% and 18%, respectively, compared with control offspring. Dynamic energy budget modeling, supported by transcriptomic profiles, suggested a significant shift of energy allocation from reproduction to structural growth, and elevated maintenance costs in exposed oysters, which is thought to be caused by interference with energy uptake. Molecular signatures of endocrine disruption were also revealed, but no endocrine disruptors were found in the biological samples. This study provides evidence that micro-PS cause feeding modifications and reproductive disruption in oysters, with significant impacts on offspring. PMID:26831072

  1. Oyster reproduction is affected by exposure to polystyrene microplastics.

    Sussarellu, Rossana; Suquet, Marc; Thomas, Yoann; Lambert, Christophe; Fabioux, Caroline; Pernet, Marie Eve Julie; Le Goïc, Nelly; Quillien, Virgile; Mingant, Christian; Epelboin, Yanouk; Corporeau, Charlotte; Guyomarch, Julien; Robbens, Johan; Paul-Pont, Ika; Soudant, Philippe; Huvet, Arnaud

    2016-03-01

    Plastics are persistent synthetic polymers that accumulate as waste in the marine environment. Microplastic (MP) particles are derived from the breakdown of larger debris or can enter the environment as microscopic fragments. Because filter-feeder organisms ingest MP while feeding, they are likely to be impacted by MP pollution. To assess the impact of polystyrene microspheres (micro-PS) on the physiology of the Pacific oyster, adult oysters were experimentally exposed to virgin micro-PS (2 and 6 µm in diameter; 0.023 mg·L(-1)) for 2 mo during a reproductive cycle. Effects were investigated on ecophysiological parameters; cellular, transcriptomic, and proteomic responses; fecundity; and offspring development. Oysters preferentially ingested the 6-µm micro-PS over the 2-µm-diameter particles. Consumption of microalgae and absorption efficiency were significantly higher in exposed oysters, suggesting compensatory and physical effects on both digestive parameters. After 2 mo, exposed oysters had significant decreases in oocyte number (-38%), diameter (-5%), and sperm velocity (-23%). The D-larval yield and larval development of offspring derived from exposed parents decreased by 41% and 18%, respectively, compared with control offspring. Dynamic energy budget modeling, supported by transcriptomic profiles, suggested a significant shift of energy allocation from reproduction to structural growth, and elevated maintenance costs in exposed oysters, which is thought to be caused by interference with energy uptake. Molecular signatures of endocrine disruption were also revealed, but no endocrine disruptors were found in the biological samples. This study provides evidence that micro-PS cause feeding modifications and reproductive disruption in oysters, with significant impacts on offspring.

  2. ramic restorations

    Ashish R Jain

    2013-01-01

    Full Text Available Rehabilitation of a patient with severely worn dentition after restoring the vertical dimension is a complex procedure and assessment of the vertical dimension is an important aspect in these cases. This clinical report describes the full mouth rehabilitation of a patient who was clinically monitored to evaluate the adaptation to a removable occlusal splint to restore vertical dimension for a period 1 month and provisional restorations to determine esthetic and functional outcome for a period of 3 months. It is necessary to recognizing that form follows function and that anterior teeth play a vital role in the maintenance of oral health. Confirmation of tolerance to changes in the vertical dimension of occlusion (VDO is of paramount importance. Articulated study casts and a diagnostic wax-up can provide important information for the evaluation of treatment options. Alteration of the VDO should be conservative and should not be changed without careful consideration.

  3. Hair restoration.

    Rawnsley, Jeffrey D

    2008-08-01

    The impact of male hair loss as a personal and social marker of aging is tremendous and its persistence as a human concern throughout recorded history places it in the forefront of male concern about the physical signs of aging. Restoration of the frontal hairline has the visual effect of re-establishing facial symmetry and turning back time. Follicular unit transplantation has revolutionized hair restoration, with its focus on redistributing large numbers of genetically stable hair to balding scalp in a natural distribution. Follicular unit hair restoration surgery is a powerful tool for the facial plastic surgeon in male aesthetic facial rejuvenation because it offers high-impact, natural-appearing results with minimal downtime and risk for adverse outcome.

  4. Coral reef bleaching: ecological perspectives

    Glynn, P. W.

    1993-03-01

    Coral reef bleaching, the whitening of diverse invertebrate taxa, results from the loss of symbiotic zooxanthellae and/or a reduction in photosynthetic pigment concentrations in zooxanthellae residing within the gastrodermal tissues of host animals. Of particular concern are the consequences of bleaching of large numbers of reef-building scleractinian corals and hydrocorals. Published records of coral reef bleaching events from 1870 to the present suggest that the frequency (60 major events from 1979 to 1990), scale (co-occurrence in many coral reef regions and often over the bathymetric depth range of corals) and severity (>95% mortality in some areas) of recent bleaching disturbances are unprecedented in the scientific literature. The causes of small scale, isolated bleaching events can often be explained by particular stressors (e.g., temperature, salinity, light, sedimentation, aerial exposure and pollutants), but attempts to explain large scale bleaching events in terms of possible global change (e.g., greenhouse warming, increased UV radiation flux, deteriorating ecosystem health, or some combination of the above) have not been convincing. Attempts to relate the severity and extent of large scale coral reef bleaching events to particular causes have been hampered by a lack of (a) standardized methods to assess bleaching and (b) continuous, long-term data bases of environmental conditions over the periods of interest. An effort must be made to understand the impact of bleaching on the remainder of the reef community and the long-term effects on competition, predation, symbioses, bioerosion and substrate condition, all factors that can influence coral recruitment and reef recovery. If projected rates of sea warming are realized by mid to late AD 2000, i.e. a 2°C increase in high latitude coral seas, the upper thermal tolerance limits of many reef-building corals could be exceeded. Present evidence suggests that many corals would be unable to adapt

  5. National Coral Reef Monitoring Program: Coral Reef Fish collected in Fl Keys Reef Tract (2014)

    National Oceanic and Atmospheric Administration, Department of Commerce — Divers conducted reef visual census (RVC) fish surveys and habitat assessments at 433 sites in the Florida Keys, 436 sites in the Dry Tortugas and 320 sites in the...

  6. Assessment of Acropora palmata in the Mesoamerican Reef System

    Rodríguez-Martínez, Rosa E.; Banaszak, Anastazia T.; McField, Melanie D.; Beltrán-Torres, Aurora U.; Álvarez-Filip, Lorenzo

    2014-01-01

    The once-dominant shallow reef-building coral Acropora palmata has suffered drastic geographical declines in the wider Caribbean from a disease epidemic that began in the late 1970s. At present there is a lack of quantitative data to determine whether this species is recovering over large spatial scales. Here, we use quantitative surveys conducted in 107 shallow-water reef sites between 2010 and 2012 to investigate the current distribution and abundance of A. palmata along the Mesoamerican Reef System (MRS). Using historical data we also explored how the distribution and abundance of this species has changed in the northern portion of the MRS between 1985 and 2010–2012. A. palmata was recorded in only a fifth of the surveyed reef sites in 2010–2012. In the majority of these reef sites the presence of A. palmata was patchy and rare. Only one site (Limones reef), in the northernmost portion of the MRS, presented considerably high A. palmata cover (mean: 34.7%, SD: 24.5%). At this site, the size-frequency distribution of A. palmata colonies was skewed towards small colony sizes; 84% of the colonies were healthy, however disease prevalence increased with colony size. A comparison with historical data showed that in the northern portion of the MRS, in 1985, A. palmata occurred in 74% of the 31 surveyed sites and had a mean cover of 7.7% (SD = 9.0), whereas in 2010–2012 this species was recorded in 48% of the sites with a mean cover of 2.9% (SD = 7.5). A. palmata populations along the MRS are failing to recover the distribution and abundance they had prior to the 1980s. Investigating the biological (e.g., population genetics) and environmental conditions (e.g., sources of stress) of the few standing reefs with relatively high A. palmata cover is crucial for the development of informed restoration models for this species. PMID:24763319

  7. Assessment of Acropora palmata in the Mesoamerican Reef System.

    Rosa E Rodríguez-Martínez

    Full Text Available The once-dominant shallow reef-building coral Acropora palmata has suffered drastic geographical declines in the wider Caribbean from a disease epidemic that began in the late 1970s. At present there is a lack of quantitative data to determine whether this species is recovering over large spatial scales. Here, we use quantitative surveys conducted in 107 shallow-water reef sites between 2010 and 2012 to investigate the current distribution and abundance of A. palmata along the Mesoamerican Reef System (MRS. Using historical data we also explored how the distribution and abundance of this species has changed in the northern portion of the MRS between 1985 and 2010-2012. A. palmata was recorded in only a fifth of the surveyed reef sites in 2010-2012. In the majority of these reef sites the presence of A. palmata was patchy and rare. Only one site (Limones reef, in the northernmost portion of the MRS, presented considerably high A. palmata cover (mean: 34.7%, SD: 24.5%. At this site, the size-frequency distribution of A. palmata colonies was skewed towards small colony sizes; 84% of the colonies were healthy, however disease prevalence increased with colony size. A comparison with historical data showed that in the northern portion of the MRS, in 1985, A. palmata occurred in 74% of the 31 surveyed sites and had a mean cover of 7.7% (SD = 9.0, whereas in 2010-2012 this species was recorded in 48% of the sites with a mean cover of 2.9% (SD = 7.5. A. palmata populations along the MRS are failing to recover the distribution and abundance they had prior to the 1980s. Investigating the biological (e.g., population genetics and environmental conditions (e.g., sources of stress of the few standing reefs with relatively high A. palmata cover is crucial for the development of informed restoration models for this species.

  8. Baselines and Comparison of Coral Reef Fish Assemblages in the Central Red Sea

    Kattan, Alexander

    2014-12-01

    In order to properly assess human impacts and appropriate restoration goals, baselines of pristine conditions on coral reefs are required. In Saudi Arabian waters of the central Red Sea, widespread and heavy fishing pressure has been ongoing for decades. To evaluate this influence, we surveyed the assemblage of offshore reef fishes in both this region as well as those of remote and largely unfished southern Sudan. At comparable latitudes, of similar oceanographic influence, and hosting the same array of species, the offshore reefs of southern Sudan provided an ideal location for comparison. We found that top predators (jacks, large snappers, groupers, and others) dominated the reef fish community biomass in Sudan’s deep south region, resulting in an inverted (top-heavy) biomass pyramid. In contrast, the Red Sea reefs of central Saudi Arabia exhibited the typical bottom-heavy pyramid and show evidence for trophic cascades in the form of mesopredator release. Biomass values from Sudan’s deep south are quite similar to those previously reported in the remote and uninhabited Northwest Hawaiian Islands, northern Line Islands, Pitcairn Islands, and other remote Pacific islands and atolls. The findings of this study suggest that heavy fishing pressure has significantly altered the fish community structure of Saudi Arabian Red Sea reefs. The results point towards the urgent need for enhanced regulation and enforcement of fishing practices in Saudi Arabia while simultaneously making a strong case for protection in the form of marine protected areas in the southern Sudanese Red Sea.

  9. Future Reef Growth Can Mitigate Physical Impacts of Sea-Level Rise on Atoll Islands

    Beetham, Edward; Kench, Paul S.; Popinet, Stéphane

    2017-10-01

    We present new detail on how future sea-level rise (SLR) will modify nonlinear wave transformation processes, shoreline wave energy, and wave driven flooding on atoll islands. Frequent and destructive wave inundation is a primary climate-change hazard that may render atoll islands uninhabitable in the near future. However, limited research has examined the physical vulnerability of atoll islands to future SLR and sparse information are available to implement process-based coastal management on coral reef environments. We utilize a field-verified numerical model capable of resolving all nonlinear wave transformation processes to simulate how future SLR will modify wave dissipation and overtopping on Funafuti Atoll, Tuvalu, accounting for static and accretionary reef adjustment morphologies. Results show that future SLR coupled with a static reef morphology will not only increase shoreline wave energy and overtopping but will fundamentally alter the spectral composition of shoreline energy by decreasing the contemporary influence of low-frequency infragravity waves. "Business-as-usual" emissions (RCP 8.5) will result in annual wave overtopping on Funafuti Atoll by 2030, with overtopping at high tide under mean wave conditions occurring from 2090. Comparatively, vertical reef accretion in response to SLR will prevent any significant increase in shoreline wave energy and mitigate wave driven flooding volume by 72%. Our results provide the first quantitative assessment of how effective future reef accretion can be at mitigating SLR-associated flooding on atoll islands and endorse active reef conservation and restoration for future coastal protection.

  10. Transparent Restoration

    Barou, L.; Bristogianni, T.; Oikonomopoulou, F.

    2017-01-01

    This paper investigates the application of structural glass in restoration and conservation practices in order to highlight and safeguard our built heritage. Cast glass masonry is introduced in order to consolidate a half-ruined historic tower in Greece, by replacing the original parts of the façade

  11. Site Restoration

    Noynaert, L.; Bruggeman, A.; Cornelissen, R.; Massaut, V.; Rahier, A

    2001-04-01

    The objectives, the programme, and the achievements of the Site Restoration Department of SCK-CEN in 2000 are summarised. Main activities include the decommissioning of the BR3 PWR-reactor as well as other clean-up activities, projects on waste minimisation and activities related to the management of decommissioning projects. The department provides consultancy and services to external organisations.

  12. Site Restoration

    Noynaert, L.; Bruggeman, A.; Cornelissen, R.; Massaut, V.; Rahier, A.

    2001-01-01

    The objectives, the programme, and the achievements of the Site Restoration Department of SCK-CEN in 2000 are summarised. Main activities include the decommissioning of the BR3 PWR-reactor as well as other clean-up activities, projects on waste minimisation and activities related to the management of decommissioning projects. The department provides consultancy and services to external organisations

  13. Restorative neuroscience

    Andres, Robert H; Meyer, Morten; Ducray, Angélique D

    2008-01-01

    There is increasing interest in the search for therapeutic options for diseases and injuries of the central nervous system (CNS), for which currently no effective treatment strategies are available. Replacement of damaged cells and restoration of function can be accomplished by transplantation of...

  14. Environmental Restoration

    Zeevaert, T.; Vanmarcke, H

    1998-07-01

    The objectives of SCK-CEN's programme on environmental restoration are (1) to optimize and validate models for the impact assessment from environmental, radioactive contaminations, including waste disposal or discharge; (2) to support the policy of national authorities for public health and radioactive waste management. Progress and achievements in 1997 are reported.

  15. Project ash cultch: A report on optimal oyster cultch based on a prepared fly ash substratum

    Price, K.S.; Hansen, K.M.; Schlekat, C.E.

    1991-01-01

    Based on a three year study involving setting, growth, mortality, oyster condition, and metals accumulation, the evidence is extensive and convincing that stabilized coal ash is an acceptable oyster growing cultch (substratum). Oyster larvae are attracted to set on coal ash cultch at commercial fishery densities, tend to grow as well as on natural substrata (oyster shell), and are moderately more exposed to predators on the puck shaped ash materials as produced for this study. Oysters grown for one to two years on coal ash do not accumulate heavy metals and generally are in good health as measured by several biological condition indexes

  16. Effects of Great Barrier Reef degradation on recreational reef-trip demand: a contingent behaviour approach

    Kragt, M.E.; Roebeling, P.C.; Ruijs, A.J.W.

    2009-01-01

    There is a growing concern that increased nutrient and sediment runoff from river catchments are a potential source of coral reef degradation. Degradation of reefs may affect the number of tourists visiting the reef and, consequently, the economic sectors that rely on healthy reefs for their income

  17. Status of coral reefs of India

    Muley, E.V.; Venkataraman, K.; Alfred, J.R.B.; Wafar, M.V.M.

    and economic significance of coral reefs and the threat perceptions, Government of India has initiated measures for their intensive conservation and management. Present paper deals with ecological status of coral reefs in the country and various national...

  18. Biology of corals and coral reefs

    Rajkumar, R.; Parulekar, A.H.

    on the systematic position is presented. The general structure is depicted with illustrations. Physiology part is updated to current knowledge on reproduction, nutrition and excretion of corals. The coral reefs section begins with status of world reefs...

  19. Suspension of oysters reduces the populations of Vibrio parahaemolyticus and Vibrio vulnificus.

    Cole, K M; Supan, J; Ramirez, A; Johnson, C N

    2015-09-01

    Vibrio parahaemolyticus (Vp) and Vibrio vulnificus (Vv) are associated with the consumption of raw oysters and cause illnesses ranging from simple gastroenteritis to life-threatening septicaemia. These halophilic bacteria are frequently found in marine and estuarine systems, accumulating within the tissues of a number of aquatic organisms and passing on to humans after consumption, through contaminated water, or via open wounds. As benthic organisms capable of filtering 40 gallons of water per hour, sediment is an important source of potentially pathogenic vibrios in oysters destined for raw consumption. This research used off-bottom oyster culture to reduce vibrio concentrations in oysters. Colony hybridization was used to enumerate Vp and Vv in bottom and suspended oysters. Vv and Vp concentrations were generally lower in oysters suspended off-bottom, and suspension decreased vibrio loads in oysters by an average of 13%. Suspension of oysters reduced vibrio concentrations. This study found that oyster suspension significantly reduced some populations of potentially pathogenic vibrios. These results indicate that oyster suspension could be a viable approach for preharvest treatment to reduce illness in consumers of raw oysters. © 2015 The Society for Applied Microbiology.

  20. Vibrio bacteria in raw oysters: managing risks to human health.

    Froelich, Brett A; Noble, Rachel T

    2016-03-05

    The human-pathogenic marine bacteria Vibrio vulnificus and V. parahaemolyticus are strongly correlated with water temperature, with concentrations increasing as waters warm seasonally. Both of these bacteria can be concentrated in filter-feeding shellfish, especially oysters. Because oysters are often consumed raw, this exposes people to large doses of potentially harmful bacteria. Various models are used to predict the abundance of these bacteria in oysters, which guide shellfish harvest policy meant to reduce human health risk. Vibrio abundance and behaviour varies from site to site, suggesting that location-specific studies are needed to establish targeted risk reduction strategies. Moreover, virulence potential, rather than simple abundance, should be also be included in future modeling efforts. © 2016 The Author(s).

  1. Cholera after the consumption of raw oysters. A case report.

    Klontz, K C; Tauxe, R V; Cook, W L; Riley, W H; Wachsmuth, I K

    1987-12-01

    In August 1986, a 76-year-old woman in Miami, Florida, developed profuse watery diarrhea and abdominal cramps. Two and four days before the onset of her illness, she had eaten six raw oysters at each of two restaurants in Miami. A stool specimen yielded toxigenic Vibrio cholerae O1 biotype El Tor, serotype Inaba. The results of toxin gene probing of the organism recovered from the patient differed significantly from those of other V. cholerae O1 isolates from the Gulf Coast and elsewhere in the world. A program of active surveillance identified no other cases of cholera in Miami. The source of the raw oysters eaten by the patient was traced to Louisiana. Her case represents the first reported case of cholera associated with eating raw oysters.

  2. Transport of Calcareous Fragments by Reef Fishes.

    Bardach, J E

    1961-01-13

    The weight of sand, coral scrapings, algal fragments, and other calcareous materials which pass through the intestines of reef fishes was calculated on a hectare-per-year basis. It was found that browsing omnivorous reef fishes which rely, in part, on a plant diet ingested and redeposited at least 2300 kg of such material on a 1-hectare study reef near Bermuda. Reasons are presented why this estimate, certainly in order of magnitude, should be applicable to coral reefs in general.

  3. Defining optimal freshwater flow for oyster production: effects of freshet rate and magnitude of change and duration on eastern oysters and Perkinsus marinus infection

    LaPeyre, Megan K.; Gossman, B.; La Peyre, Jerome F.

    2009-01-01

    In coastal Louisiana, the development of large-scale freshwater diversion projects has led to controversy over their effects on oyster resources. Using controlled laboratory experiments in combination with a field study, we examined the effects of pulsed freshwater events (freshet) of different magnitude, duration, and rate of change on oyster resources. Laboratory and field evidence indicate that low salinity events (oyster growth was positively correlated with salinity. To maximize oyster production, data indicate that both low and high salinity events will be necessary.

  4. Gulf-Wide Information System, Environmental Sensitivity Index Oyster Leases, Geographic NAD83, LDWF (2001) [esi_oyster_lease_LDWF_2001

    Louisiana Geographic Information Center — This data set contains Environmental Sensitivity Index (ESI) oyster leases data of coastal Louisiana. The ESI is a classification and ranking system, which...

  5. Photography of Coral Reefs from ISS

    Robinson, Julie A.

    2009-01-01

    This viewgraph presentation reviews the uses of photography from the International Space Station (ISS) in studying Earth's coral reefs. The photographs include reefs in various oceans . The photographs have uses for science in assisting NASA mapping initiatives, distribution worldwide through ReefBase, and by biologist in the field.

  6. Genotoxicity of diuron and glyphosate in oyster spermatozoa and embryos.

    Akcha, F; Spagnol, C; Rouxel, J

    2012-01-15

    We investigated the effects of genotoxicant exposure in gametes and embryos to find a possible link between genotoxicity and reproduction/developmental impairment, and explore the impact of chemical genotoxicity on population dynamics. Our study focused on the genotoxic effects of two herbicides on oyster gametes and embryos: glyphosate (both as an active substance and in the Roundup formulation) and diuron. France is Europe's leading consumer of agrochemical substances and as such, contamination of France's coastal waters by pesticides is a major concern. Glyphosate and diuron are among the most frequently detected herbicides in oyster production areas; as oyster is a specie with external reproduction, its gametes and embryos are in direct contact with the surrounding waters and are hence particularly exposed to these potentially dangerous substances. In the course of this study, differences in genotoxic and embryotoxic responses were observed in the various experiments, possibly due to differences in pollutant sensitivity between the tested genitor lots. Glyphosate and Roundup had no effect on oyster development at the concentrations tested, whereas diuron significantly affected embryo-larval development from the lowest tested concentration of 0.05 μg L⁻¹, i.e. an environmentally realistic concentration. Diuron may therefore have a significant impact on oyster recruitment rates in the natural environment. Our spermiotoxicity study revealed none of the tested herbicides to be cytotoxic for oyster spermatozoa. However, the alkaline comet assay showed diuron to have a significant genotoxic effect on oyster spermatozoa at concentrations of 0.05 μg L⁻¹ upwards. Conversely, no effects due to diuron exposure were observed on sperm mitochondrial function or acrosomal membrane integrity. Although our initial results showed no negative effect on sperm function, the possible impact on fertilization rate and the consequences of the transmission of damaged DNA for

  7. Oyster Shell Recycling and Bone Waste Treatment Using Plasma Pyrolysis

    Chae, Jae Ou; Knak, S P; Knak, A N; Koo, H J; Ravi, V

    2006-01-01

    Investigations on the recycling of oyster shells and bone waste treatment using the plasma pyrolysis technique are presented in this paper. A arc based plasma torch operated at 25 kW was employed for the experiments. Fresh oyster shells were recycled using the plasma torch to convert them to a useful product such as CaO. Bone waste was treated to remove the infectious organic part and to vitrify the inorganic part. The time required for treatment in both cases was significantly short. Significant reduction in the weight of the samples was observed in both cases

  8. Oyster Shell Recycling and Bone Waste Treatment Using Plasma Pyrolysis

    Jae, Ou Chae; Knak, S. P.; Knak, A. N.; Koo, H. J.; Ravi, V.

    2006-11-01

    Investigations on the recycling of oyster shells and bone waste treatment using the plasma pyrolysis technique are presented in this paper. A arc based plasma torch operated at 25 kW was employed for the experiments. Fresh oyster shells were recycled using the plasma torch to convert them to a useful product such as CaO. Bone waste was treated to remove the infectious organic part and to vitrify the inorganic part. The time required for treatment in both cases was significantly short. Significant reduction in the weight of the samples was observed in both cases.

  9. In vivo effects of metaldehyde on Pacific oyster, Crassostrea gigas: comparing hemocyte parameters in two oyster families.

    Moreau, Pierrick; Burgeot, Thierry; Renault, Tristan

    2015-06-01

    Pollutants via run-off into the ocean represent a potential threat to marine organisms, especially bivalves such as oysters living in coastal environments. These organisms filter large volumes of seawater and may accumulate contaminants within their tissues. Pesticide contamination in water could have a direct or indirect toxic action on tissues or cells and could induce alteration of immune system. Bivalve immunity is mainly supported by hemocytes and participates directly by phagocytosis to eliminate pathogens. Some studies have shown that pesticides can reduce immune defences and/or modify genomes in vertebrates and invertebrates. Metaldehyde is used to kill slugs, snails and other terrestrial gastropods. Although metaldehyde has been detected in surface waters, its effects on marine bivalves including the Pacific oyster, Crassostrea gigas, have never been studied. Given the mode of action of this molecule and its targets (molluscs), it could be potentially more toxic to oysters than other pesticides (herbicides, fungicides, insecticides, etc.). Effects of metaldehyde on oyster hemocyte parameters were thus monitored through in vivo experiments based on a short-term exposure. In this work, metaldehyde at 0.1 μg/L, which corresponds to an average concentration detected in the environment, modulated hemocyte activities of Pacific oysters after an in vivo short-term contact. Individuals belonging to two families showed different behaviours for some hemocyte activities after contamination by metaldehyde. These results suggested that effects of pollutants on oysters may differ from an individual to another in relation to genetic diversity. Finally, it appears essential to take an interest in the effects of metaldehyde on a wide variety of aquatic invertebrates including those that have a significant economic impact.

  10. Role of dissolved and particulate cadmium in the accumulation of cadmium in cultured oysters (Crassostrea gigas)

    Lekhi, Priyanka [Department of Chemistry, University of British Columbia, Vancouver, BC V6T 1Z4 (Canada)], E-mail: anka.lekhi@ubc.ca; Cassis, D. [Department of Earth and Ocean Sciences, University of British Columbia, Vancouver, BC V6T 1Z4 (Canada); Pearce, C.M. [Pacific Biological Station, Fisheries and Oceans Canada, Nanaimo, BC V9T 6N7 (Canada); Ebell, N. [Odyssey Shellfish Ltd., Nanoose Bay, BC V0R 9G0 (Canada); Maldonado, M.T. [Department of Earth and Ocean Sciences, University of British Columbia, Vancouver, BC V6T 1Z4 (Canada); Orians, K.J. [Department of Chemistry, University of British Columbia, Vancouver, BC V6T 1Z4 (Canada); Department of Earth and Ocean Sciences, University of British Columbia, Vancouver, BC V6T 1Z4 (Canada)

    2008-04-15

    Pacific oysters (Crassostrea gigas) collected on the coast of British Columbia, Canada have occasionally shown cadmium (Cd) concentrations at or above 2 {mu}g g{sup -1} (wet weight), which has resulted in the loss of some international markets. This study investigated the source and transfer of Cd to oysters by focusing on the role of dissolved and particulate Cd in seawater. Parameters monitored for 1 year at two oyster farm sites on Vancouver Island included: oyster tissue mass and shell length, Cd in oysters, dissolved Cd, particulate Cd, temperature and salinity. Results show that dissolved Cd was the main source of Cd to the oysters and that Cd was mainly concentrated in the gut tissues. A seasonal trend was observed in Cd in oysters, in which levels were lowest during periods of higher temperatures. Results also indicate that the local oceanographic inputs and sediment diagenesis directly affect dissolved Cd and thereby influence the Cd levels in oysters. Particulate matter was not found to be a source of Cd in oysters, and was actually negatively correlated. This was likely due to the uptake of dissolved Cd by phytoplankton and the effect of phytoplankton on oyster tissue mass.

  11. Effects of High Hydrostatic Pressure on the Physical, Microbial, and Chemical Attributes of Oysters (Crassostrea virginica).

    Lingham, Talaysha; Ye, Mu; Chen, Haiqiang; Chintapenta, Lathadevi Karuna; Handy, Eunice; Zhao, Jing; Wu, Changqing; Ozbay, Gulnihal

    2016-05-01

    The change in the quality attributes (physical, microbial, and chemical) of oysters (Crassostrea virginica) after high hydrostatic pressure (HHP) treatment at 300 MPa at room temperature (RT, 25 °C) 300, 450, and 500 MPa at 0 °C for 2 min and control oysters without treatment were evaluated over 3 wk. The texture and tissue yield percentages of oysters HHP treated at 300 MPa, RT increased significantly (P oysters reached the spoilage point of 7 log CFU/g after 15 d. Coliform counts (log MPN/g) were low during storage with total and fecal coliforms less than 3.5 and 1.0. High pressure treated oysters at 500 MPa at 0 °C were significantly higher (P oysters HHP treated at 300 MPa at 0 °C in lipid oxidation values. The highest pressure (500 MPa) treatment in this study, significantly (P oysters at 3 wk was significantly higher (P oysters [300 MPa, (RT); 450 MPa (0 °C); and 500 MPa (0 °C)]. HHP treatments of oysters were not significantly different in pH, percent salt extractable protein (SEP), and total lipid values compared to control. Based on our results, HHP prolongs the physical, microbial, and chemical quality of oysters. © 2016 Institute of Food Technologists®

  12. Role of dissolved and particulate cadmium in the accumulation of cadmium in cultured oysters (Crassostrea gigas)

    Lekhi, Priyanka; Cassis, D.; Pearce, C.M.; Ebell, N.; Maldonado, M.T.; Orians, K.J.

    2008-01-01

    Pacific oysters (Crassostrea gigas) collected on the coast of British Columbia, Canada have occasionally shown cadmium (Cd) concentrations at or above 2 μg g -1 (wet weight), which has resulted in the loss of some international markets. This study investigated the source and transfer of Cd to oysters by focusing on the role of dissolved and particulate Cd in seawater. Parameters monitored for 1 year at two oyster farm sites on Vancouver Island included: oyster tissue mass and shell length, Cd in oysters, dissolved Cd, particulate Cd, temperature and salinity. Results show that dissolved Cd was the main source of Cd to the oysters and that Cd was mainly concentrated in the gut tissues. A seasonal trend was observed in Cd in oysters, in which levels were lowest during periods of higher temperatures. Results also indicate that the local oceanographic inputs and sediment diagenesis directly affect dissolved Cd and thereby influence the Cd levels in oysters. Particulate matter was not found to be a source of Cd in oysters, and was actually negatively correlated. This was likely due to the uptake of dissolved Cd by phytoplankton and the effect of phytoplankton on oyster tissue mass

  13. Pleistocene reef development in Bulukumba, South Sulawesi

    Muhammad Imran Andi

    2017-01-01

    Full Text Available Quaternary reefs are commonly studied right now to explain climate change during that time. They act as a good archive of climate change, because their development is influenced by climate condition. The research area is located in the southern tip of Bulukumba Regency, South Sulawesi. The objective of this research is to define the development of the reef. Methods applied in this research are field survey of 4 line transects along reef cliff. Laboratory work is mostly on petrographic and biofacies analyses in order to reconstruct the reef development. Four reef biofacies have developed in this study namely 1 Coralgal framestone - wackestone, 2 Massive coral framestone facies, 3 Platylike coral Bindstone facies, and 4 Branching Coral Bafflestone facies. Based on the facies association and organism accumulation, the reefs are interpreted to be developed within a reef complex in a shallow marine environment.

  14. COLLABORATIVE GUIDE: A REEF MANAGER'S GUIDE TO ...

    Innovative strategies to conserve the world's coral reefs are included in a new guide released today by NOAA, and the Australian Great Barrier Reef Marine Park Authority, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. Referred to as A Reef Manager's Guide to Coral Bleaching, the guide will provide coral reef managers with the latest scientific information on the causes of coral bleaching and new management strategies for responding to this significant threat to coral reef ecosystems. Innovative strategies to conserve the world's coral reefs are included in a new guide released today by NOAA, and the Australian Great Barrier Reef Marine Park Authority, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. Dr. Jordan West, of the National Center for Environmental Assessment, was a major contributor to the guide. Referred to as

  15. Storm-generated coral fragments - A viable source of transplants for reef rehabilitation

    Garrison, V.; Ward, G.

    2008-01-01

    Coral reefs throughout the world have been damaged by storms, diseases, coral predators, temperature anomalies, and human activities. During the past three decades, recovery has been limited and patchy. Although a damaged coral reef cannot be restored to its original condition, interest in reef restoration is increasing. In a pilot project in the Caribbean (US Virgin Islands), storm-produced fragments of Acropora palmata, A. cervicornis, and Porites porites were collected from donor reefs and transplanted to nearby degraded reefs. Sixty coral fragments were attached to dead-coral substrate (usually A. palmata skeletons), at similar depths from which they had been collected (1-3.5 m), using nylon cable ties. Seventy-five intact colonies were designated as controls. Study colonies were assessed at 6-month intervals for 2 years (1999-2001) and annually thereafter (through 2004). One-fourth of the 135 colonies and fragments monitored were alive at the conclusion of the 5-year study. Survival of control and transplanted A. cervicornis and P. porites was very low (median survival 2.4 and 1.8 years, respectively), with no significant differences between transplant and control colonies. Site and depth did not contribute significantly to A. palmata colony survival, but colony size and transplant/control status did. Probability of survival increased with colony size. Median survival for A. palmata was 1.3 years for transplant and 4.3 years for natural colonies when not controlled for size. A. palmata was the only viable candidate for reef rehabilitation. Storm swells were the primary cause of mortality.

  16. Accretion history of mid-Holocene coral reefs from the southeast Florida continental reef tract, USA

    Stathakopoulos, A.; Riegl, B. M.

    2015-03-01

    Sixteen new coral reef cores were collected to better understand the accretion history and composition of submerged relict reefs offshore of continental southeast (SE) Florida. Coral radiometric ages from three sites on the shallow inner reef indicate accretion initiated by 8,050 Cal BP and terminated by 5,640 Cal BP. The reef accreted up to 3.75 m of vertical framework with accretion rates that averaged 2.53 m kyr-1. The reef was composed of a nearly even mixture of Acropora palmata and massive corals. In many cases, cores show an upward transition from massives to A. palmata and may indicate local dominance by this species prior to reef demise. Quantitative macroscopic analyses of reef clasts for various taphonomic and diagenetic features did not correlate well with depth/environmental-related trends established in other studies. The mixed coral framestone reef lacks a classical Caribbean reef zonation and is best described as an immature reef and/or a series of fused patch reefs; a pattern that is evident in both cores and reef morphology. This is in stark contrast to the older and deeper outer reef of the SE Florida continental reef tract. Accretion of the outer reef lasted from 10,695-8,000 Cal BP and resulted in a larger and better developed structure that achieved a distinct reef zonation. The discrepancies in overall reef morphology and size as well as the causes of reef terminations remain elusive without further study, yet they likely point to different climatic/environmental conditions during their respective accretion histories.

  17. Performance of selected eastern oyster lines across northeastern US estuaries

    Eastern oyster production derived from aquaculture has expanded, but growth potential is constrained by losses to disease. Breeding programs supporting industry in the Northeast have targeted resistance to three diseases: MSX, Dermo, and ROD. Selected lines should possess some level of resistance a...

  18. High pressure processing inactivates human norovirus within oysters

    Consumption of raw bivalve mollusks can result in norovirus infection. One potential intervention for virus-contaminated shellfish is high pressure processing (HPP). Currently HPP is known to inactivate Vibrio bacteria, hepatitis A virus, and murine norovirus within oysters. To evaluate the potentia...

  19. Genetic variation in anti-parasite behavior in oysters

    Behavioral avoidance of disease-causing parasites provides a first line of defense against the threat of infection, particularly when hosts are exposed to free-living parasite stages in the external environment. We report that suspension-feeding oysters (Crassostrea virginica) respond to the presenc...

  20. Growth and reproductive investment of introduced Pacific oysters

    Cardoso, J.F.M.F.; Peralta, N.R.E.; Machado, J.P.; van der Veer, H.W.

    2013-01-01

    Growth and reproductive investment of cultured Pacific oysters Crassostrea gigas were studied in two south-western European estuaries: the Ria de Ribadeo in Spain and the Ria Formosa in Portugal. Developing gonads were found in individuals >23.5 mm shell length in the Ria Formosa and >27.5 mm shell

  1. Length-Weight relationships of mangrove oyster, Crassostrea gasar ...

    The length-weight relationships (LWRs) of mangrove oyster, Crassostrea gasar, cultured under continuous and periodic submergence in tidal ponds, for a period of seven months, February to August 2010 were determined. A total of 375 individuals each of pond A (continuous submergence) and B (periodic submergence) ...

  2. Effect of Depuration on Microbial Content of Mangrove Oyster ...

    Mangrove oysters and water samples collected from Benya lagoon, located at Elmina in the Central Region of Ghana were investigated for microbial contamination. A total of nine fungal isolates were identified. These were Aspergilus niger, A. sulphurus, species of Penicillium, Rhizopus, Trichoderma, Fusarium, ...

  3. THE USE OF THE MANGROVE OYSTER ( CROSSOSTREA GASAR ...

    DR NWAGBOJE

    mangrove oyster (Crossostrea gasar) and water from Golubo creek in the Niger ... did not exceed the Federal Environmental Protection Agency (FEPA) maximum ... the area include farming, local gin production, lumbering and palm wine production. ..... Risk Assessment of Heavy Metals in Ogba River, Benin City, Nigeria.

  4. Removal of Arsenic with Oyster Shell: Experimental Measurements

    Md. Atiqur Rahman, , and

    2008-12-01

    Full Text Available Oyster shell has tremendous potential as a remediation material for the removal of arsenic from groundwater. A single arsenic removal system was developed with oyster shell for tube well water containing arsenic. The system removes arsenic from water by adsorption through fine oyster shell. Various conditions that affect the adsorption/desorption of arsenic were investigated. Adsorption column methods showed the removal of As(III under the following conditions: initial As concentration, 100 µg /L; oyster shell amount, 6 g; particle size, <355µm ; treatment flow rate, 1.7 mL/min; and pH 6.5. Arsenic concentration of the treated water were below the Bangladesh drinking water standard of 50 µg/L for As. The desorption efficiencies with 2M of KOH after the treatment of groundwater were in the range of 80-83%. A combination of techniques was used to measure the pH, conductivity, cations and anions. The average concentrations of other inorganic constituents of health concern (Na, K, Ca, Mg and Fe in treated water were below their respective WHO guideline for drinking. The present study might provide new avenues to achieve the arsenic concentrations required for drinking water recommended by Bangladesh and the World Health Organization (WHO.

  5. High protein complementation with high fiber substrates for oyster ...

    Agricultural residues have been world widely accepted for oyster mushroom culture. In this study, we used wheat straw, barley straw, maize stem residue, and lawn residue as substrates coupled with wheat bran, rice bran and soybean powder as complements for the growth of Pleurotus florida and Pleurotus ostreatus as ...

  6. Accumulation of diarrhetic shellfish poisoning toxins in the oyster ...

    Diarrhetic shellfish poisoning (DSP) poses a significant threat to the safe consumption of shellfish in the southern Benguela ecosystem. The accumulation of DSP toxins was investigated in two cultivated bivalve species, the Pacific oyster Crassostrea gigas and the mussel Choromytilus meridionalis, suspended from a ...

  7. High Latitude Reefs: A Potential Refuge for Reef Builders

    Amat, A.; Bates, N.

    2003-04-01

    Coral reefs globally show variable signs of deterioration or community structure changes due to a host of anthropogenic and natural factors. In these global scenarios, rates of calcification by reef builders such as Scleractinian corals are predicted to significantly decline in the future due to the increase in atmospheric CO_2. When considering the response of reefs to the present climate change, temperature effects should also be taken into account. Here, we investigate the simultaneous impact of temperature and CO_2 on the high-latitude Bermuda coral reef system (32^oN, 64^oE)through a series of in vitro experiments at different CO_2 levels and seasonally different summer (27^oC) and winter (20^oC) temperature conditions. Four species of Scleractinian corals (Porites astreoides, Diploria labyrinthiformis, Madracis mirabilis and decactis) were acclimated for three months at: 20^oC and 27^oC (both with CO_2 levels at 400 ppm (control) and 700 ppm). Growth was assessed by buoyant weight techniques during the acclimation period. Photosynthesis, respiration and calcification were measured at the end of this period using respirometric chambers. A reproduction experiment was also undertaken under 27^oC. Photosynthesis mainly remains constant or increases under high CO_2 conditions. The results of the integrated calcification measurements confirm the hypothesis that an increase in CO_2 induces a decrease in calcification. However an increase in photosynthesis can be observed when CO_2 is unfavorable for calcification suggesting that a biological control of calcification through photosynthesis could prevent a drop in the calcification potential. Buoyant weight results indicate that the CO_2 impact could be less detrimental under lower temperature. This result will be compared with the instantaneous calcification measurements in the chambers and some in situ coral growth assessments in winter and summer conditions. The consequences for the response of marginal reefs

  8. Ecological States and the Resilience of Coral Reefs

    Tim McClanahan

    2002-12-01

    incidence of diseases in coral reef species. Consequently, many coral reefs, including those that are heavily managed, have experienced net losses in accumulated inorganic carbon in recent decades and appear likely to continue this trend in coming decades. Reefs urgently need to be managed with a view to strengthening their resilience to the increased frequency and intensity of these pressures. Ecological targets must include the restoration or maintenance of species diversity, keystone species, spatial heterogeneity, refugia, and connectivity. Achieving these goals will require unprecedented cooperative synergy between human organizations at all political levels, from intergovernmental to local. * [ERRATUM: A longer version of this paper is published as a book chapter in McClanahan, T.R., N.V.C. Polunin and T.J. Done. 2002. Resilience of coral reefs. in L.H. Gunderson and L. Pritchard Jr. (editors. Resilience and the Behavior of Large-Scale Systems. SCOPE and Island Press, Washington. The original version of this paper stated incorrectly that the book chapter was still in press.

  9. Biochemical and volatile organic compound profile of European flat oyster (Ostrea edulis) and Pacific cupped oyster (Crassostrea gigas) cultivated in the Eastern Scheldt and Lake Grevelingen, the Netherlands

    Houcke, van Jasper; Medina, Isabel; Linssen, Jozef; Luten, Joop

    2016-01-01

    The aim of this study was to evaluate the effect of two important different geographical cultivation areas in the Netherlands (Eastern Scheldt and Lake Grevelingen) on the volatile organic compound (VOC) profile of European flat oyster (Ostrea edulis) and Pacific cupped oyster (Crassostrea

  10. A linked land-sea modeling framework to inform ridge-to-reef management in high oceanic islands.

    Jade M S Delevaux

    Full Text Available Declining natural resources have led to a cultural renaissance across the Pacific that seeks to revive customary ridge-to-reef management approaches to protect freshwater and restore abundant coral reef fisheries. Effective ridge-to-reef management requires improved understanding of land-sea linkages and decision-support tools to simultaneously evaluate the effects of terrestrial and marine drivers on coral reefs, mediated by anthropogenic activities. Although a few applications have linked the effects of land cover to coral reefs, these are too coarse in resolution to inform watershed-scale management for Pacific Islands. To address this gap, we developed a novel linked land-sea modeling framework based on local data, which coupled groundwater and coral reef models at fine spatial resolution, to determine the effects of terrestrial drivers (groundwater and nutrients, mediated by human activities (land cover/use, and marine drivers (waves, geography, and habitat on coral reefs. We applied this framework in two 'ridge-to-reef' systems (Hā'ena and Ka'ūpūlehu subject to different natural disturbance regimes, located in the Hawaiian Archipelago. Our results indicated that coral reefs in Ka'ūpūlehu are coral-dominated with many grazers and scrapers due to low rainfall and wave power. While coral reefs in Hā'ena are dominated by crustose coralline algae with many grazers and less scrapers due to high rainfall and wave power. In general, Ka'ūpūlehu is more vulnerable to land-based nutrients and coral bleaching than Hā'ena due to high coral cover and limited dilution and mixing from low rainfall and wave power. However, the shallow and wave sheltered back-reef areas of Hā'ena, which support high coral cover and act as nursery habitat for fishes, are also vulnerable to land-based nutrients and coral bleaching. Anthropogenic sources of nutrients located upstream from these vulnerable areas are relevant locations for nutrient mitigation, such as

  11. Coral reef surveys in India

    Wafar, M.V.M.

    and in persuading the Government agencies to take protective and conservational measures. The current approach is towards establishing a monitoring design to detect changes in reef ecology in the long-term, and to standardize the survey techniques to be compatible...

  12. Quantifying Coral Reef Ecosystem Services

    Coral reefs have been declining during the last four decades as a result of both local and global anthropogenic stresses. Numerous research efforts to elucidate the nature, causes, magnitude, and potential remedies for the decline have led to the widely held belief that the recov...

  13. Oysters as biomonitors of the apex barge oil spill

    Wade, T.L.; Jackson, T.J.; McDonald, T.J.; Wilkinson, D.L.; Brooks, J.M.

    1993-01-01

    The collision of the Greek tanker ship Shinoussa resulted in a spill of an estimated 692,000 gallons of catalytic feed stock oil into Galveston Bay on July 28, 1990. Oysters were collected from Galveston Bay Todds Dump (GBTD) 235 days previous to the spill and 6, 37, 132, and 495 days after the spill. Oysters were also collected from Galveston Bay Redfish Island (GBRI), a site known to be impacted by the spill, 37 and 110 days after the spill. The concentration of the 24 polynuclear aromatic hydrocarbons (PAH) measured for the National Oceanic and Atmospheric Administration's national status and trends program (NS ampersand T) site showed a sharp increase from about 100 ng/g to over 600 ng/g one week after the spill compared to concentrations 235 days previous to the spill. The concentration of the 24 NS ampersand T PAH in oysters from GBRI ranges from 400 to over 1000 ng/g. Soon after the spill the concentration of the 24 NS ampersand T PAH at Todds Dump decreased to levels not statistically different from prespill samples. However, analyses of alkylated and sulfur containing aromatic compounds indicate the oysters were still contaminated with Apex barge oil at least 37 and 110 days after the spill at GBTD and GBRI, respectively. Data from NS ampersand T sampling at GBTD more than a year after the spill (495 days) indicates the presence of alkylated aromatic hydrocarbons that may be from Apex barge oil still in the area. It appears that a sink of Apex barge oil (i.e., in sediments) may periodically be released by storms or other events into the ecosystem near GBTD. Therefore, bioavailable Apex barge oil is still present and may adversely affect oysters 495 days after the spill

  14. Biochemical profile of oyster Crassostrea madrasensis and its nutritional attributes

    K.K. Asha

    2014-01-01

    Full Text Available Oysters are highly esteemed sea food and considered a delicacy throughout the world. Yet this resource is not optimally utilised in several parts of the world. The aim of this study is to highlight its nutritional importance. Biochemical composition and nutritional attributes of oyster meat are discussed. Proximate composition, fatty acid and amino acid profiles and mineral content were determined in oysters (Crassostrea madrasensis. Moisture, protein, fat, carbohydrate and ash contents in the oyster were 82.64%, 9.41%, 3.25% 3.2% and 1.01%, respectively and it was rich in macro-minerals and trace elements especially selenium. Polyunsaturated fatty acids (PUFA were highest of the total lipids among which eicosapentaenoic acid, docosahexaenoic acid and linoleic acid were the prominent fatty acids. The n-3/n-6 index was high indicating a predominance of n-3 fatty acids in the species. Total amino acid content was 99.33 g/100 g crude protein, of which, essential amino acid lysine was the most abundant. Valine had the lowest essential amino acid score (EAAS (0.17 while threonine had the highest EAAS of 3.62. Chemical score was 17% and the lowest limiting amino acid was valine. Protein efficiency ratio, essential amino acid index and biological value of oyster were 3.92, 120.2 and 174.0, respectively which indicates that the protein is of superior quality. Data on biochemical composition, nutritional attributes and quality indices of C. madrasensis protein may prove important for future policies regarding exploitation of this species and for inducing favourable changes in consumer preferences.

  15. Latitudinal gradients in ecosystem engineering by oysters vary across habitats.

    McAfee, Dominic; Cole, Victoria J; Bishop, Melanie J

    2016-04-01

    Ecological theory predicts that positive interactions among organisms will increase across gradients of increasing abiotic stress or consumer pressure. This theory has been supported by empirical studies examining the magnitude of ecosystem engineering across environmental gradients and between habitat settings at local scale. Predictions that habitat setting, by modifying both biotic and abiotic factors, will determine large-scale gradients in ecosystem engineering have not been tested, however. A combination of manipulative experiments and field surveys assessed whether along the east Australian coastline: (1) facilitation of invertebrates by the oyster Saccostrea glomerata increased across a latitudinal gradient in temperature; and (2) the magnitude of this effect varied between intertidal rocky shores and mangrove forests. It was expected that on rocky shores, where oysters are the primary ecosystem engineer, they would play a greater role in ameliorating latitudinal gradients in temperature than in mangroves, where they are a secondary ecosystem engineer living under the mangrove canopy. On rocky shores, the enhancement of invertebrate abundance in oysters as compared to bare microhabitat decreased with latitude, as the maximum temperatures experienced by intertidal organisms diminished. By contrast, in mangrove forests, where the mangrove canopy resulted in maximum temperatures that were cooler and of greater humidity than on rocky shores, we found no evidence of latitudinal gradients of oyster effects on invertebrate abundance. Contrary to predictions, the magnitude by which oysters enhanced biodiversity was in many instances similar between mangroves and rocky shores. Whether habitat-context modifies patterns of spatial variation in the effects of ecosystem engineers on community structure will depend, in part, on the extent to which the environmental amelioration provided by an ecosystem engineer replicates that of other co-occurring ecosystem engineers.

  16. Evidence for protection of targeted reef fish on the largest marine reserve in the Caribbean

    Fabián Pina-Amargós

    2014-02-01

    Full Text Available Marine reserves can restore fish abundance and diversity in areas impacted by overfishing, but the effectiveness of reserves in developing countries where resources for enforcement are limited, have seldom been evaluated. Here we assess whether the establishment in 1996 of the largest marine reserve in the Caribbean, Gardens of the Queen in Cuba, has had a positive effect on the abundance of commercially valuable reef fish species in relation to neighboring unprotected areas. We surveyed 25 sites, including two reef habitats (reef crest and reef slope, inside and outside the marine reserve, on five different months, and over a one-and-a-half year period. Densities of the ten most frequent, highly targeted, and relatively large fish species showed a significant variability across the archipelago for both reef habitats that depended on the month of survey. These ten species showed a tendency towards higher abundance inside the reserve in both reef habitats for most months during the study. Average fish densities pooled by protection level, however, showed that five out of these ten species were at least two-fold significantly higher inside than outside the reserve at one or both reef habitats. Supporting evidence from previously published studies in the area indicates that habitat complexity and major benthic communities were similar inside and outside the reserve, while fishing pressure appeared to be homogeneous across the archipelago before reserve establishment. Although poaching may occur within the reserve, especially at the boundaries, effective protection from fishing was the most plausible explanation for the patterns observed.

  17. Flood impacts in Keppel Bay, southern great barrier reef in the aftermath of cyclonic rainfall.

    Alison M Jones

    Full Text Available In December 2010, the highest recorded Queensland rainfall associated with Tropical Cyclone 'Tasha' caused flooding of the Fitzroy River in Queensland, Australia. A massive flood plume inundated coral reefs lying 12 km offshore of the Central Queensland coast near Yeppoon and caused 40-100% mortality to coral fringing many of the islands of Keppel Bay down to a depth of ∼8 m. The severity of coral mortality was influenced by the level of exposure to low salinity seawater as a result of the reef's distance from the flood plume and to a lesser extent, water depth and whether or not the reef faced the plume source. There was no evidence in this study of mortality resulting from pollutants derived from the nearby Fitzroy Catchment, at least in the short term, suggesting that during a major flood, the impact of low salinity on corals outweighs that of pollutants. Recovery of the reefs in Keppel Bay from the 2010/2011 Fitzroy River flood is likely to take 10-15 years based on historical recovery periods from a similar event in 1991; potentially impacting visitor numbers for tourism and recreational usage. In the meantime, activities like snorkeling, diving and coral viewing will be focused on the few shallow reefs that survived the flood, placing even further pressure on their recovery. Reef regeneration, restoration and rehabilitation are measures that may be needed to support tourism in the short term. However, predictions of a warming climate, lower rainfall and higher intensity summer rain events in the Central and Coastal regions of Australia over the next decade, combined with the current anthropogenic influences on water quality, are likely to slow regeneration with consequent impact on long-term reef resilience.

  18. Experimental infection of Pacific oyster Crassostrea gigas spat by ostreid herpesvirus 1: demonstration of oyster spat susceptibility

    Schikorski David

    2011-02-01

    Full Text Available Abstract In 2008 and 2009, acute mortalities occurred in France among Pacific cupped oyster, Crassostrea gigas, spat. Different hypothesis including the implication of environmental factors, toxic algae and/or pathogens have been explored. Diagnostic tests indicated that OsHV-1 including a particular genotype, termed OsHV-1 μVar, was detected in most of samples and especially in moribund oysters with the highlighting of virus particles looking like herpes viruses by TEM examination. In this study, an experimental protocol to reproduce OsHV-1 infection in laboratory conditions was developed. This protocol was based on the intramuscular injection of filtered (0.22 μm tissue homogenates prepared from naturally OsHV-1 infected spat collected on French coasts during mortality outbreaks in 2008. Results of the experimental trials showed that mortalities were induced after injection. Moreover, filtered tissue homogenates induced mortalities whereas the same tissue homogenates exposed to an ultraviolet (UV treatment did not induce any mortality suggesting that oyster spat mortalities require the presence of a UV sensitive agent. Furthermore, analysis of injected oyster spat revealed the detection of high amounts of OsHV-1 DNA by real-time quantitative PCR. Finally, TEM analysis demonstrated the presence of herpes virus particles. The developed protocol allowed to maintain sources of infective virus which can be useful for the development of further studies concerning the transmission and the development of OsHV-1 infection.

  19. Site Restoration

    Noynaert, L.; Bruggeman, A.; Cornelissen, R.; Massaut, V.; Rahier, A

    2002-04-01

    The objectives, the programme, and the achievements of SCK-CEN's Site Restoration Department for 2001 are described. Main activities include the decommissioning of the BR3 PWR-reactor as well as other clean-up activities, projects on waste minimisation and the management of spent fuel and the flow of dismantled materials and the recycling of materials from decommissioning activities based on the smelting of metallic materials in specialised foundries. The department provides consultancy and services to external organisations and performs R and D on new techniques including processes for the treatment of various waste components including the reprocessing of spent fuel, the treatment of tritium, the treatment of liquid alkali metals into cabonates through oxidation, the treatment of radioactive organic waste and the reconditioning of bituminised waste products.

  20. Ocean acidification increases the vulnerability of native oysters to predation by invasive snails.

    Sanford, Eric; Gaylord, Brian; Hettinger, Annaliese; Lenz, Elizabeth A; Meyer, Kirstin; Hill, Tessa M

    2014-03-07

    There is growing concern that global environmental change might exacerbate the ecological impacts of invasive species by increasing their per capita effects on native species. However, the mechanisms underlying such shifts in interaction strength are poorly understood. Here, we test whether ocean acidification, driven by elevated seawater pCO₂, increases the susceptibility of native Olympia oysters to predation by invasive snails. Oysters raised under elevated pCO₂ experienced a 20% increase in drilling predation. When presented alongside control oysters in a choice experiment, 48% more high-CO₂ oysters were consumed. The invasive snails were tolerant of elevated CO₂ with no change in feeding behaviour. Oysters raised under acidified conditions did not have thinner shells, but were 29-40% smaller than control oysters, and these smaller individuals were consumed at disproportionately greater rates. Reduction in prey size is a common response to environmental stress that may drive increasing per capita effects of stress-tolerant invasive predators.

  1. Influence of eutrophication on metal bioaccumulation and oral bioavailability in oysters, Crassostrea angulata.

    Li, Shun-Xing; Chen, Li-Hui; Zheng, Feng-Ying; Huang, Xu-Guang

    2014-07-23

    Oysters (Crassostrea angulata) are often exposed to eutrophication. However, how these exposures influence metal bioaccumulation and oral bioavailability (OBA) in oysters is unknown. After a four month field experimental cultivation, bioaccumulation factors (BAF) of metals (Fe, Cu, As, Cd, and Pb) from seawater to oysters and metal oral bioavailability in oysters by bionic gastrointestinal tract were determined. A positive effect of macronutrient (nitrate N and total P) concentration in seawater on BAF of Cd in oysters was observed, but such an effect was not significant for Fe, Cu, Pb, and As. Only OBA of As was significantly positively correlated to N and P contents. For Fe, OBA was negatively correlated with N. The regular variation of the OBA of Fe and As may be due to the effect of eutrophication on the synthesis of metal granules and heat-stable protein in oysters, respectively.

  2. A comparative proteomic study on the effects of metal pollution in oysters Crassostrea hongkongensis.

    Xu, Lanlan; Ji, Chenglong; Wu, Huifeng; Tan, Qiaoguo; Wang, Wen-Xiong

    2016-11-15

    The metal pollution has posed great risk on the coastal organisms along the Jiulongjiang Estuary in South China. In this work, two-dimensional electrophoresis-based proteomics was applied to the oysters Crassostrea hongkongensis from metal pollution sites to characterize the proteomic responses to metal pollution. Metal accumulation and proteomic responses indicated that the oysters from BJ site were more severely contaminated than those from FG site. Compared with those oyster samples from the clean site (JZ), metal pollution induced cellular injuries, oxidative and immune stresses in oyster heapatopancreas from both BJ and FG sites via differential metabolic pathways. In addition, metal pollution in BJ site induced disturbance in energy and lipid metabolisms in oysters. Results indicated that cathepsin L and ferritin GF1 might be the biomarkers of As and Fe in oyster C. hongkongensis, respectively. This study demonstrates that proteomics is a useful tool for investigating biological effects induced by metal pollution. Copyright © 2016 Elsevier Ltd. All rights reserved.

  3. Climate change and coral reef bleaching: An ecological assessment of long-term impacts, recovery trends and future outlook

    Baker, Andrew C.; Glynn, Peter W.; Riegl, Bernhard

    2008-12-01

    regenerating and recovering coral reefs have originated from broadcast spawning taxa with a potential for asexual growth, relatively long distance dispersal, successful settlement, rapid growth and a capacity for framework construction. Whether or not affected reefs can continue to function as before will depend on: (1) how much coral cover is lost, and which species are locally extirpated; (2) the ability of remnant and recovering coral communities to adapt or acclimatize to higher temperatures and other climatic factors such as reductions in aragonite saturation state; (3) the changing balance between reef accumulation and bioerosion; and (4) our ability to maintain ecosystem resilience by restoring healthy levels of herbivory, macroalgal cover, and coral recruitment. Bleaching disturbances are likely to become a chronic stress in many reef areas in the coming decades, and coral communities, if they cannot recover quickly enough, are likely to be reduced to their most hardy or adaptable constituents. Some degraded reefs may already be approaching this ecological asymptote, although to date there have not been any global extinctions of individual coral species as a result of bleaching events. Since human populations inhabiting tropical coastal areas derive great value from coral reefs, the degradation of these ecosystems as a result of coral bleaching and its associated impacts is of considerable societal, as well as biological concern. Coral reef conservation strategies now recognize climate change as a principal threat, and are engaged in efforts to allocate conservation activity according to geographic-, taxonomic-, and habitat-specific priorities to maximize coral reef survival. Efforts to forecast and monitor bleaching, involving both remote sensed observations and coupled ocean-atmosphere climate models, are also underway. In addition to these efforts, attempts to minimize and mitigate bleaching impacts on reefs are immediately required. If significant reductions in

  4. Coral Reef and Hardbottom from Unified Florida Reef Tract Map (NODC Accession 0123059)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is a subset of the Unified Map representing Coral reef and Hardbottom areas. Version 1.1 - December 2013. The Unified Florida Reef Tract Map (Unified...

  5. Detection, quantification and genotyping of noroviruses in oysters implicated in disease outbreaks

    Haefeli, Deborah; Gantenbein-Demarchi, Corinne; Böttiger, Blenda

    2012-01-01

    . While GI and GII have often been verified as causative agents of oyster-transmitted illness, GIV is rarely detected and has so far not been confirmed in outbreaks related to oysters. The aim of this study was to determine whether NoVs from oysters implicated in a disease outbreak were linked to the GI......Noroviruses (NoVs) are a major cause of foodborne outbreaks of acute gastroenteritis in humans. Transmission of NoV is commonly linked to the consumption of oysters as they accumulate viruses through filter feeding in faecal-contaminated water. The NoV genogroups (G)I, GII and GIV infect humans...

  6. Exploring spatial and temporal variations of cadmium concentrations in pacific oysters from british columbia.

    Feng, Cindy Xin; Cao, Jiguo; Bendell, Leah

    2011-09-01

    Oysters from the Pacific Northwest coast of British Columbia, Canada, contain high levels of cadmium, in some cases exceeding some international food safety guidelines. A primary goal of this article is the investigation of the spatial and temporal variation in cadmium concentrations for oysters sampled from coastal British Columbia. Such information is important so that recommendations can be made as to where and when oysters can be cultured such that accumulation of cadmium within these oysters is minimized. Some modern statistical methods are applied to achieve this goal, including monotone spline smoothing, functional principal component analysis, and semi-parametric additive modeling. Oyster growth rates are estimated as the first derivatives of the monotone smoothing growth curves. Some important patterns in cadmium accumulation by oysters are observed. For example, most inland regions tend to have a higher level of cadmium concentration than most coastal regions, so more caution needs to be taken for shellfish aquaculture practices occurring in the inland regions. The semi-parametric additive modeling shows that oyster cadmium concentration decreases with oyster length, and oysters sampled at 7 m have higher average cadmium concentration than those sampled at 1 m. © 2010, The International Biometric Society.

  7. Investigations of Salmonella enterica serovar newport infections of oysters by using immunohistochemistry and knockout mutagenesis.

    Morrison, Christopher M; Dial, Sharon M; Day, William A; Joens, Lynn A

    2012-04-01

    The consumption of raw oysters is an important risk factor in the acquisition of food-borne disease, with Salmonella being one of a number of pathogens that have been found in market oysters. Previous work by our lab found that Salmonella was capable of surviving in oysters for over 2 months under laboratory conditions, and this study sought to further investigate Salmonella's tissue affinity and mechanism of persistence within the oysters. Immunohistochemistry was used to show that Salmonella was capable of breaching the epithelial barriers, infecting the deeper connective tissues of the oysters, and evading destruction by the oysters' phagocytic hemocytes. To further investigate the mechanism of these infections, genes vital to the function of Salmonella's two main type III secretion systems were disrupted and the survivability of these knockout mutants within oysters was assayed. When the Salmonella pathogenicity island 1 and 2 mutant strains were exposed to oysters, there were no detectable deficiencies in their abilities to survive, suggesting that Salmonella's long-term infection of oysters does not rely upon these two important pathogenicity islands and must be due to some other, currently unknown, mechanism.

  8. Sediment quality guidelines for copper and zinc for filter-feeding estuarine oysters?

    Birch, G.F., E-mail: gavin.birch@sydney.edu.a [Environmental Geology Group, School of Geosciences, Sydney University, NSW (Australia); Hogg, T.D. [Environmental Geology Group, School of Geosciences, Sydney University, NSW (Australia)

    2011-01-15

    Sediment quality guidelines (SQGs) assess the ability of bottom sediment to sustain healthy infauna and water quality guidelines (WQGs) provide protection for a designated percentage of aquatic species. Filter-feeding marine species, e.g. oysters and mussels, acquire food from particles in the water column and protection of these animals is not provided by SQGs or WQGs. The current work investigated the relationship between metal (Cu, Zn) concentrations in total and fine-fraction (<62.5 {mu}m) surficial sediment digested in a range of acids and chelating agents and oyster tissue metal concentrations. A strong correlation between oyster tissue Cu and Zn concentrations and fine-fraction surficial sediment digested in 1 M HCl provided a sedimentary guideline which predicted tissue metal concentrations in oysters and established a level (<45 {mu}g g{sup -1} and <1000 {mu}g g{sup -1}, respectively) for protecting oysters from exceeding human consumption levels (70 {mu}g g{sup -1} and 1000 {mu}g g{sup -1}, respectively). - A strong correlation between oyster tissue Cu and Zn concentrations and fine-fraction surficial sediment digested in 1 M HCl provided a sedimentary guideline which predicted tissue metal concentrations in oysters and established a level for protecting oysters from exceeding human consumption levels for these metals. The guidelines for fine surficial sediment developed in the present work accurately predicted oyster tissue concentrations in the field.

  9. Inhibition of 4NQO-Induced Oral Carcinogenesis by Dietary Oyster Shell Calcium.

    Chen, Ying; Jiang, Yi; Liao, Liyan; Zhu, Xiaoxin; Tang, Shengan; Yang, Qing; Sun, Lihua; Li, Yujie; Gao, Shuangrong; Xie, Zhongjian

    2016-03-01

    Oyster has gained much attention recently for its anticancer activity but it is unclear whether calcium, the major antitumor ingredient in oyster shell, is responsible for the anticarcinogenic role of the oyster. To address this issue, C57BL/6 mice were fed with the carcinogen 4-nitroquinoline-1-oxide (4NQO, 50 µg/mL) and normal diet or a diet containing oyster powder, oyster calcium, or calcium depleted oyster powder. The tongue tissue specimens isolated from these mice were histologically evaluated for hyperplasia, dysplasia, and papillary lesions, and then analyzed for proliferation and differentiation markers by immunohistochemistry. The results showed that mice on the diet containing oyster calcium significantly reduced rates of tumors in the tongue and proliferation and enhanced differentiation in the oral epithelium compared with the diet containing calcium depleted oyster powder. These results suggest that calcium in oyster plays a critical role in suppressing formation of oral squamous cell carcinoma and proliferation and promoting differentiation of the oral epithelium. © The Author(s) 2015.

  10. Rapid detection of toxic metals in non-crushed oyster shells by portable X-ray fluorescence spectrometry

    Chou Ju, E-mail: Ju.Chou@selu.ed [Department of Chemistry and Physics, Southeastern Louisiana University, Hammond, LA 70402 (United States); Clement, Garret; Bursavich, Bradley; Elbers, Don [Department of Chemistry and Physics, Southeastern Louisiana University, Hammond, LA 70402 (United States); Cao Baobao; Zhou Weilie [Advanced Material Research Institute, University of New Orleans, New Orleans, LA 70148 (United States)

    2010-06-15

    The aim of this study was the multi-elemental detection of toxic metals such as lead (Pb) in non-crushed oyster shells by using a portable X-ray fluorescence (XRF) spectrometer. A rapid, simultaneous multi-element analytical methodology for non-crushed oyster shells has been developed using a portable XRF which provides a quick, quantitative, non-destructive, and cost-effective mean for assessment of oyster shell contamination from Pb. Pb contamination in oyster shells was further confirmed by scanning electron microscopy with energy dispersive spectroscopy (SEM-EDS). The results indicated that Pb is distributed in-homogeneously in contaminated shells. Oyster shells have a lamellar structure that could contribute to the high accumulation of Pb on oyster shells. - A rapid, simultaneous multi-element analytical methodology for non-crushed oyster shells has been developed using XRF and contamination of lead on oyster shells was confirmed by XRF and SEM-EDS.

  11. Rapid detection of toxic metals in non-crushed oyster shells by portable X-ray fluorescence spectrometry

    Chou Ju; Clement, Garret; Bursavich, Bradley; Elbers, Don; Cao Baobao; Zhou Weilie

    2010-01-01

    The aim of this study was the multi-elemental detection of toxic metals such as lead (Pb) in non-crushed oyster shells by using a portable X-ray fluorescence (XRF) spectrometer. A rapid, simultaneous multi-element analytical methodology for non-crushed oyster shells has been developed using a portable XRF which provides a quick, quantitative, non-destructive, and cost-effective mean for assessment of oyster shell contamination from Pb. Pb contamination in oyster shells was further confirmed by scanning electron microscopy with energy dispersive spectroscopy (SEM-EDS). The results indicated that Pb is distributed in-homogeneously in contaminated shells. Oyster shells have a lamellar structure that could contribute to the high accumulation of Pb on oyster shells. - A rapid, simultaneous multi-element analytical methodology for non-crushed oyster shells has been developed using XRF and contamination of lead on oyster shells was confirmed by XRF and SEM-EDS.

  12. COMPARISON OF CARBON AND NITROGEN FLUXES IN TIDEFLAT FOOD WEBS DOMINATED BY BURROWING SHRIMP OR BY CULTURED OYSTERS

    Two species of indigenous, thalassinid burrowing shrimps are pests to the benthic culture of Pacific oysters (Crassostrea gigas) because deposition of sediment excavated by the shrimps buries or smothers the oysters. Carbaryl pesticide is used to reduce burrowing shrimp densitie...

  13. ReefLink Database: A decision support tool for Linking Coral Reefs and Society Through Systems Thinking

    Coral reefs provide the ecological foundation for productive and diverse fish and invertebrate communities that support multibillion dollar reef fishing and tourism industries. Yet reefs are threatened by growing coastal development, climate change, and over-exploitation. A key i...

  14. Artificial reefs: “Attraction versus Production”

    Eduardo Barros Fagundes Netto

    2011-04-01

    Full Text Available The production of fish is the most common reason for the construction and installation of an artificial reef. More recently, environmental concerns and conservation of biological resources have been instrumental to the formulation of new goals of the research. One of the issues to be resolved is the biological function of “attraction vs. production” as a result of the use of artificial reefs. The uncertainty as to the answer to the question whether the artificial reefs will or not benefit the development of fish stocks could be solved if the artificial reefs would be managed as marine protected areas.

  15. Cyanobacteria in Coral Reef Ecosystems: A Review

    L. Charpy

    2012-01-01

    Full Text Available Cyanobacteria have dominated marine environments and have been reef builders on Earth for more than three million years (myr. Cyanobacteria still play an essential role in modern coral reef ecosystems by forming a major component of epiphytic, epilithic, and endolithic communities as well as of microbial mats. Cyanobacteria are grazed by reef organisms and also provide nitrogen to the coral reef ecosystems through nitrogen fixation. Recently, new unicellular cyanobacteria that express nitrogenase were found in the open ocean and in coral reef lagoons. Furthermore, cyanobacteria are important in calcification and decalcification. All limestone surfaces have a layer of boring algae in which cyanobacteria often play a dominant role. Cyanobacterial symbioses are abundant in coral reefs; the most common hosts are sponges and ascidians. Cyanobacteria use tactics beyond space occupation to inhibit coral recruitment. Cyanobacteria can also form pathogenic microbial consortia in association with other microbes on living coral tissues, causing coral tissue lysis and death, and considerable declines in coral reefs. In deep lagoons, coccoid cyanobacteria are abundant and are grazed by ciliates, heteroflagellates, and the benthic coral reef community. Cyanobacteria produce metabolites that act as attractants for some species and deterrents for some grazers of the reef communities.

  16. Vaal Reefs South uranium plant

    Anon.

    1979-01-01

    The Vaal Reefs mining complex, part of the Anglo American Corporation, is the largest gold and uranium producing complex in the world, being South Africa's principal producer, accounting for about a quarter of the country's uranium production. Vaal Reefs South uranium plant in the Orkney district was recently officially opened by Dr AJA Roux, the retiring president of the Atomic Energy Board and chairman of the Uranium Enrichment Corporation and will increase the country's uranium production. In the field of technology, and particularly processing technology, South Africa has shown the world unprecedented technology achievement in the field of uranium extraction from low grade ores and the development of the unique uranium enrichment process. New technical innovations that have been incorporated in this new plant are discussed

  17. Multibiomarker assessment of three Brazilian estuaries using oysters as bioindicators

    Valdez Domingos, F.X.; Azevedo, M.; Silva, M.D.; Randi, M.A.F.; Freire, C.A.; Silva de Assis, H.C.; Oliveira Ribeiro, C.A.

    2007-01-01

    Oysters have been largely employed as bioindicators of environmental quality in biomonitoring studies. Crassostrea rhizophorae was selected to evaluate the health status of three estuarine areas impacted by anthropogenic activities along the Brazilian coast, in three estuarine complexes, ranging in latitude from 7 to 25 deg. S. In each estuary three sites were sampled in Winter and in Summer: a site considered as reference, and two sites next to contamination sources. Condition index was similar at all sites and estuaries, with the highest values found for Itamaraca oysters in Summer. Necrosis, hyperplasia, mucocyte hypertrophy and fusion of ordinary filaments were the main histopathological lesions observed. Muscle cholinesterase activity was overall similar, but with a strong seasonal effect. Inhibition or activation of branchial total ATPase and Na,K-ATPase activities at the contaminated sites was observed. The health status of these estuarine areas is quite similar, and the combined use of biomarkers is recommended

  18. Plesiomonas shigelloides Periprosthetic Knee Infection After Consumption of Raw Oysters.

    Hustedt, Joshua W; Ahmed, Sarim

    Periprosthetic infections are a leading cause of morbidity after total joint arthroplasty. Common pathogens include Staphylococcus aureus, streptococcus, enterococcus, Escherichia coli, and Pseudomonas aeruginosa. However, there are many cases in which rare bacteria are isolated. This case report describes a periprosthetic knee infection caused by Plesiomonas shigelloides. In the United States, P shigelloides and 2 other Vibrionaceae family members, Vibrio vulnificus and Vibrio parahaemolyticus, are most often contracted from eating raw oysters and shellfish. P shigelloides usually causes a self-limiting watery diarrhea, but in immunosuppressed people it can cause septicemia. In this case report, a chemically and biologically immunosuppressed man consumed raw oysters and developed P shigelloides septicemia and acute periprosthetic knee infection that required surgical intervention.

  19. Retran simulation of Oyster Creek generator trip startup test

    Alammar, M.A.

    1987-01-01

    RETRAN simulation of Oyster Creek generator trip startup test was carried out as part of Oyster Creek RETRAN model qualification program for reload licensing applications. The objective of the simulation was to qualify the turbine model and its interface with the control valve and bypass systems under severe transients. The test was carried out by opening the main breakers at rated power. The turbine speed governor closed the control valves and the pressure regulator opened the bypass valves within 0.5 sec. The stop valves closed by a no-load turbine trip, before the 10 percent overspeed trip was reached and the reactor scrammed on high APRM neutron flux. The simulation resulted in qualifying a normalized hydraulic torque for the turbine model and a 0.3 sec, delay block for the bypass model to account for the different delays in the hydraulic linkages present in the system. One-dimensional kinetics was used in this simulation

  20. Multiple enzymatic profiles of Vibrio parahaemolyticus strains isolated from oysters

    Renata Albuquerque Costa

    Full Text Available The enzymatic characterization of vibrios has been used as a virulence indicator of sanitary interest. The objective of this study was to determine the enzymatic profile of Vibrio parahaemolyticus strains (n = 70 isolated from Crassostrea rhizophorae oysters. The strains were examined for the presence of gelatinase (GEL, caseinase (CAS, elastase (ELAS, phospholipase (PHOS, lipase (LIP, amilase (AML and DNase. All enzymes, except elastase, were detected in more than 60% of the strains. The most recurrent enzymatic profiles were AML + DNase + PHOS + GEL + LIP (n = 16; 22.9% and AML + CAS + DNase + PHOS + GEL + LIP (n = 21; 30%. Considering the fact that exoenzyme production by vibrios is closely related to virulence, one must be aware of the bacteriological risk posed to human health by the consumption of raw or undercooked oysters.

  1. Factors affecting the uptake and retention of Vibrio vulnificus in oysters.

    Froelich, Brett A; Noble, Rachel T

    2014-12-01

    Vibrio vulnificus, a bacterium ubiquitous in oysters and coastal water, is capable of causing ailments ranging from gastroenteritis to grievous wound infections or septicemia. The uptake of these bacteria into oysters is often examined in vitro by placing oysters in seawater amended with V. vulnificus. Multiple teams have obtained similar results in studies where laboratory-grown bacteria were observed to be rapidly taken up by oysters but quickly eliminated. This technique, along with suggested modifications, is reviewed here. In contrast, the natural microflora within oysters is notoriously difficult to eliminate via depuration. The reason for the transiency of exogenous bacteria is that those bacteria are competitively excluded by the oyster's preexisting microflora. Evidence of this phenomenon is shown using in vitro oyster studies and a multiyear in situ case study. Depuration of the endogenous oyster bacteria occurs naturally and can also be artificially induced, but both of these events require extreme conditions, natural or otherwise, as explained here. Finally, the "viable but nonculturable" (VBNC) state of Vibrio is discussed. This bacterial torpor can easily be confused with a reduction in bacterial abundance, as bacteria in this state fail to grow on culture media. Thus, oysters collected from colder months may appear to be relatively free of Vibrio but in reality harbor VBNC cells that respond to exogenous bacteria and prevent colonization of oyster matrices. Bacterial-uptake experiments combined with studies involving cell-free spent media are detailed that demonstrate this occurrence, which could explain why the microbial community in oysters does not always mirror that of the surrounding water. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  2. The biofilteration ability of oysters (Crassostrea gigas) to reduce Aeromonas salmonicida in salmon culture.

    Ma, Xiaona; Li, Xian; Sun, Guoxiang; Sharawy, Zaki Zaki; Qiu, Tianlong; Du, Yishuai; Liu, Ying

    2017-07-01

    Pathogen contamination in the environment is inevitable with the rapid development of intensive aquaculture. Therefore, alternative ecofriendly biological strategies to control pathogenic bacteria are required. However, our aim was to investigate the ability of oysters (Crassostrea gigas) to filter the important opportunistic pathogen, Aeromonas salmonicida (strain C4), using a green fluorescent protein tag (GFP) in the Atlantic salmon (Salmo salar) farming wastewater. Hence, A. salmonicida removal efficiency and ingestion rate were detected in two different oyster stages (larvae and adults). To evaluate the practical performance of oysters as A. salmonicida biofilter, adult oysters were applied to an integrated constructed wetlands system (ICWS) and their long-term C4-GFP removal efficiency was recorded for 60 days. Overall, our results clearly indicated that oysters had substantial A. salmonicida removal ability via their ingestion process when observed under a fluorescent microscope. Approximately 88-95% of C4-GFP was removed by oyster larvae at an ingestion rate of 6.4 × 10 3 -6.2 × 10 5  CFU/h·ind, while 79-92% of C4-GFP was removed by adult oysters at an ingestion rate of 2.1 × 10 4 -3.1 × 10 6  CFU/h·ind. Furthermore, 57.9 ± 17.2% of C4-GFP removal efficiency was achieved when oysters were applied to ICWS. We, therefore, concluded that using oysters as a biofilter represents an effective alternative for removing A. salmonicida from aquaculture wastewater. However, the fate of oysters after ingesting the pathogenic bacteria, acting as a potential reservoir or vector for pathogens, is still debatable. This research provides the basis for the application of oysters as a biofilter to remove pathogens from aquaculture wastewater in industrialized production.

  3. Are oysters being bored to death? Influence of Cliona celata on Crassostrea virginica condition, growth and survival.

    Carroll, John M; O'Shaughnessy, Kathryn A; Diedrich, Grant A; Finelli, Christopher M

    2015-11-17

    The boring sponge Cliona celata is a nuisance species that can have deleterious effects on eastern oyster Crassostrea virginica growth, condition, and survival. Surprisingly, however, these effects have not been well documented and when examined, results have been equi-vocal. In this study, we provide a direct comparison of growth, condition, and survival of sponge-colonized and uncolonized oysters in southeast North Carolina in 2 separate experiments. In the first experiment, sponge-colonized oysters exhibited significantly slower growth rates, reduced condition, and lower survival relative to uncolonized oysters, although results may have been confounded by oyster source. In the second experiment, using smaller oysters from the same source population, growth rate was again significantly reduced in colonized oysters relative to uncolonized oysters, however neither condition nor survival differed. In field surveys of the same population, colonized individuals across a range of sizes demonstrated significantly reduced condition. Further, condition index was negatively correlated with sponge biomass, which was positively correlated with oyster size, suggesting that the impact of the sponge changes with ontogeny. By investigating clearance rates, tissue isotopic and nutrient content, as well as caloric value, this study provides further evidence that sponge presence causes the oysters to divert energy into costly shell maintenance and repair at the expense of shell and somatic growth. Thus, although variable, our results demonstrate negative impacts of sponge infestation on oyster demographics, particularly as oysters grow larger.

  4. 46 CFR 2.01-50 - Persons other than crew on towing, oyster, or fishing steam vessels.

    2010-10-01

    ... 46 Shipping 1 2010-10-01 2010-10-01 false Persons other than crew on towing, oyster, or fishing steam vessels. 2.01-50 Section 2.01-50 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY PROCEDURES... than crew on towing, oyster, or fishing steam vessels. (a) A steam vessel engaged in towing, oyster...

  5. The reproductive cycle of the oyster Crassostrea gasar

    CHAM Gomes

    Full Text Available The purpose of this study was to analyze the reproductive cycle of the oyster Crassostrea gasar (= C. brasiliana in the field and the laboratory. The reproductive cycle of the animals was evaluated in the field at Sambaqui Beach, Florianópolis, SC (27° 29′18″ S and 48° 32′12″ W from May 2008 through November 2009. In July, the animals were in the resting stage. The early growth stage began in August and was followed by the late growth stage in October. In November and December, the oysters began to enter the mature stage. Females in spawning condition were predominant during these months. The stages of the reproductive cycle were positively associated with temperature (r=0.77, P<0.01 and negatively associated with salinity (r=−0.56, P=0.042. These findings demonstrated that increased temperature and reduced salinity influence the reproductive development of Crassostrea gasar. The condition index (CI of the animals was also associated with the seawater temperature. The highest values of the condition index were observed during the months when the temperature of the seawater was gradually increasing. A laboratory experiment was performed to test the effect of salinity on the reproductive cycle of the oysters. The experiment was conducted in standardized tanks. The animals were conditioned using two salinities (24‰ and 34‰. The salinity regime influenced the development of the gonadal tissue of the oysters. A salinity of 24‰ produced greater reproductive development.

  6. Topographical features of physiographic unit borders on reef flat in fringing reefs

    Nakai, Tatsuo

    2007-01-01

    In coral reef ecosystem spatial structure of 10^1-10^3m scale provide very important aspect in coral reef conservation. Nakai (2007) showed that physiographic unit (PGU) could be set as well as zonation on reef flat of fringing reef. The borders of PGUs delimiting it from the open sea or an adjacent PGU are constituted by landforms such as reef crest or channels. In this article the landforms becoming the borders of PGUs were discussed and the PGU property was clarified.

  7. Electrical stimulation in white oyster mushroom (Pleurotus florida) production

    Roshita, I.; Nurfazira, K. M. P.; Fern, C. Shi; Ain, M. S. Nur

    2017-09-01

    White oyster mushroom (Pleurotus florida) is an edible mushroom that gained popularity due to its nutritional values, low production cost and ease of cultivation. There are several research reported on the mushroom fruiting bodies which were actively developed when applying electrical shock treatment. This study was aimed to investigate the effects of different electrical voltages on the growth and yield of white oyster mushroom (Pleurotus florida). Five different electrical voltages had been applied during spawning period which were 6V, 9V, 12V, 15V and mushroom bags without any treatment served as control. Treatment at 6V showed the highest rate for mycelium growth while 15V took the shortest time for fruiting body formation. However, no significant different (P>0.05) among all the treatments was observed for the time taken for the mycelium to fill-up the bag and pinhead emergence. The total fresh weight and percentage of biological efficiency for treatment at 9V showed higher values compared to control. Treatment at 9V also showed the largest pileus diameter and the most firm in the pileus texture. Meanwhile, treatment at 6V showed the highest a* value (redness). In addition, different electrical voltage treatments applied did not show any significant effect on substrate utilization efficiency, colour L* and b* values. In conclusion, among all the electrical treatments applied, 9V could be considered as the best treatment to enhance the yield of white oyster mushroom.

  8. Identification of irradiated oysters by EPR measurements on shells

    Della Monaca, S., E-mail: sara.dellamonaca@iss.it [Istituto Superiore di Sanita, viale Regina Elena, 299 Rome (Italy); Fattibene, P.; Boniglia, C.; Gargiulo, R.; Bortolin, E. [Istituto Superiore di Sanita, viale Regina Elena, 299 Rome (Italy)

    2011-09-15

    In this paper the EPR spectra of the radicals induced in oyster shells after irradiation to (0.5-2) kGy ionizing radiation doses are analyzed. EPR spectra of irradiated shells showed the complex radical composition of biocarbonates, characterized by the presence of SO{sub 2}{sup -}, SO{sub 3}{sup -} and CO{sub 2}{sup -} radicals with different symmetries. In particular, the radiation-induced line at g = 2.0038, due to the g{sub x} component of the orthorhombic SO{sub 3}{sup -}, was well distinguishable from the rest of the spectrum. The g{sub x} component of the orthorhombic SO{sub 3}{sup -} was found to be intense and stable enough to allow the identification at least for the whole shelf life of the oyster. Furthermore, it is still well visible at low microwave powers for which the other signals are weak or non-visible and has a linear dose response in the (0.5-2) kGy range. A possible procedure protocol for the identification of irradiated oysters, can be based on acquisitions of the spectrum at low microwave power values (tenths of milliWatt) and low modulation amplitude values (0.03-0.05 mT) and on the identification of the g = 2.0038 signal as a proof of the ionizing radiation treatment performed on the sample.

  9. Detection of Toxoplasma gondii DNA in Brazilian oysters (Crassostrea rhizophorae).

    Ribeiro, L A; Santos, L K N S S; Brito, P A; Maciel, B M; Da Silva, A V; Albuquerque, G R

    2015-05-04

    The aim of this study was to detect evidence of Toxoplasma gondii using polymerase chain reaction (PCR)-based techniques in oysters (Crassostrea rhizophorae) obtained from the southern coastal region of Bahia, Brazil. A total of 624 oysters were collected, and the gills and digestive glands were dissected. Each tissue sample was separated into pools containing tissues (of the same type) from three animals, leading to a total of 416 experimental samples for analysis (208 samples each from the gills and digestive glands). Molecular analysis using PCR-based detection of the T. gondii AF 146527 repetitive fragment yielded negative results for all samples. However, when nested-PCR was used for detection of the T. gondii SAG-1 gene, 17 samples were positive, with the gills being the tissue with maximal detection of the parasite. These positive results were confirmed by sample sequencing. It is therefore suggested that C. rhizophorae oysters are capable of filtering and retaining T. gondii oocysts in their tissue. This represents a risk to public health because they are traditionally ingested in natura.

  10. Identification of irradiated oysters by EPR measurements on shells

    Della Monaca, S.; Fattibene, P.; Boniglia, C.; Gargiulo, R.; Bortolin, E.

    2011-01-01

    In this paper the EPR spectra of the radicals induced in oyster shells after irradiation to (0.5-2) kGy ionizing radiation doses are analyzed. EPR spectra of irradiated shells showed the complex radical composition of biocarbonates, characterized by the presence of SO 2 - , SO 3 - and CO 2 - radicals with different symmetries. In particular, the radiation-induced line at g = 2.0038, due to the g x component of the orthorhombic SO 3 - , was well distinguishable from the rest of the spectrum. The g x component of the orthorhombic SO 3 - was found to be intense and stable enough to allow the identification at least for the whole shelf life of the oyster. Furthermore, it is still well visible at low microwave powers for which the other signals are weak or non-visible and has a linear dose response in the (0.5-2) kGy range. A possible procedure protocol for the identification of irradiated oysters, can be based on acquisitions of the spectrum at low microwave power values (tenths of milliWatt) and low modulation amplitude values (0.03-0.05 mT) and on the identification of the g = 2.0038 signal as a proof of the ionizing radiation treatment performed on the sample.

  11. A conserved tad pilus promotes Vibrio vulnificus oyster colonization.

    Pu, Meng; Duriez, Patrick; Arazi, Mattan; Rowe-Magnus, Dean A

    2018-02-01

    Vibrio vulnificus has the highest death rate (>35%) and per-case economic burden ($3.3 million) of any foodborne pathogen in the United States. Infections occur via open wounds or following ingestion of contaminated seafood, most infamously oysters. We isolated a 1000th generation descendant, designated NT that exhibited increased biofilm and aggregate formation relative to its parent. We identified two significant causal changes underlying these phenotypes. First, the entire 24-kb capsular polysaccharide biosynthesis locus, which is essential for virulence but inhibits biofilm formation, had been purged from the genome. However, NT formed more extensive biofilms and aggregates than a defined cps mutant, suggesting that additional factor(s) contributed to its phenotypes. Second, the expression of a tight adherence (tad) pilus locus was elevated in NT. Deletion of the associated pilin (flp) decreased NT biofilm and aggregate formation. Furthermore, NTΔflp strains were deficient relative to NT in an oyster colonization model, demonstrating a positive correlation between the biofilm and aggregation phenotypes associated with Tad pilus production and efficient bacterial retention by feeding oysters. Despite being widely distributed in the Vibrionaceae, this is the first demonstration of a bona fide physiological role for a Tad pilus in this bacterial family. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

  12. The effect of algae diets (Skeletonema costatum and Rhodomonas baltica) on the biochemical composition and sensory characteristics of Pacific cupped oysters (Crassostrea gigas) during land-based refinement

    Houcke, van Jasper; Medina, Isabel; Maehre, Hanne K.; Cornet, Josiane; Cardinal, Mireille; Linssen, Jozef; Luten, Joop

    2017-01-01

    Oyster refinement, a common practice in France, is aimed at increasing the weight of oyster tissue and influencing the taste properties of the refined oysters. Refinement usually takes place in land-based systems where the oysters are fed with relatively high concentrations of microalgae. In this

  13. Species richness accelerates marine ecosystem restoration in the Coral Triangle.

    Williams, Susan L; Ambo-Rappe, Rohani; Sur, Christine; Abbott, Jessica M; Limbong, Steven R

    2017-11-07

    Ecosystem restoration aims to restore biodiversity and valuable functions that have been degraded or lost. The Coral Triangle is a hotspot for marine biodiversity held in its coral reefs, seagrass meadows, and mangrove forests, all of which are in global decline. These coastal ecosystems support valuable fisheries and endangered species, protect shorelines, and are significant carbon stores, functions that have been degraded by coastal development, destructive fishing practices, and climate change. Ecosystem restoration is required to mitigate these damages and losses, but its practice is in its infancy in the region. Here we demonstrate that species diversity can set the trajectory of restoration. In a seagrass restoration experiment in the heart of the Coral Triangle (Sulawesi, Indonesia), plant survival and coverage increased with the number of species transplanted. Our results highlight the positive role biodiversity can play in ecosystem restoration and call for revision of the common restoration practice of establishing a single target species, particularly in regions having high biodiversity. Coastal ecosystems affect human well-being in many important ways, and restoration will become ever more important as conservation efforts cannot keep up with their loss. Published under the PNAS license.

  14. Oysters as vectors of marine aliens, with notes on four introduced ...

    Surveys of oyster farms in South Africa revealed four newly-recorded alien species: the black sea urchin, Tetrapygus niger, from Chile; the European flat oyster, Ostrea edulis (thought to be extinct since its intentional introduction in 1946); Montagu's crab, Xantho incisus, from the North Eastern Atlantic seas of Europe, and ...

  15. The eastern oyster genome: A resource for comparative genomics in shellfish aquaculture species

    Oyster aquaculture is an important sector of world food production. As such, it is imperative to develop a high quality reference genome for the eastern oyster, Crassostrea virginica, to assist in the elucidation of the genomic basis of commercially important traits. All genetic, gene expression and...

  16. The oyster genome reveals stress adaptation and complexity of shell formation

    Zhang, Guofan; Fang, Xiaodong; Guo, Ximing

    2012-01-01

    The Pacific oyster Crassostrea gigas belongs to one of the most species-rich but genomically poorly explored phyla, the Mollusca. Here we report the sequencing and assembly of the oyster genome using short reads and a fosmid-pooling strategy, along with transcriptomes of development and stress re...

  17. Growth and yield performance of Pleurotus ostreatus (Jacq. Fr.) Kumm (oyster mushroom) on different substrates.

    Girmay, Zenebe; Gorems, Weldesemayat; Birhanu, Getachew; Zewdie, Solomon

    2016-12-01

    Mushroom cultivation is reported as an economically viable bio-technology process for conversion of various lignocellulosic wastes. Given the lack of technology know-how on the cultivation of mushroom, this study was conducted in Wondo Genet College of Forestry and Natural Resource, with the aim to assess the suitability of selected substrates (agricultural and/or forest wastes) for oyster mushroom cultivation. Accordingly, four substrates (cotton seed, paper waste, wheat straw, and sawdust) were tested for their efficacy in oyster mushroom production. Pure culture of oyster mushroom was obtained from Mycology laboratory, Department of Plant Biology and Biodiversity Management, Addis Ababa University. The pure culture was inoculated on potato dextrose agar for spawn preparation. Then, the spawn containing sorghum was inoculated with the fungal culture for the formation of fruiting bodies on the agricultural wastes. The oyster mushroom cultivation was undertaken under aseptic conditions, and the growth and development of mushroom were monitored daily. Results of the study revealed that oyster mushroom can grow on cotton seed, paper waste, sawdust and wheat straw, with varying growth performances. The highest biological and economic yield, as well as the highest percentage of biological efficiency of oyster mushroom was obtained from cotton seed, while the least was from sawdust. The study recommends cotton seed, followed by paper waste as suitable substrates for the cultivation of oyster mushroom. It also suggests that there is a need for further investigation on various aspects of oyster mushroom cultivation in Ethiopia to promote the industry.

  18. A habitat suitability model for Pacific oysters (Crassostrea gigas) in the Oosterschelde

    Schellekens, T.; Wijsman, J.W.M.; Brink, van den A.M.

    2012-01-01

    The modelled habitat suitability maps show a reasonable estimation of the suitability for oysters throughout the Delta and can be used to broadly indicate the consequences of the effect of climate change and infrastructural changes on the habitat suitability for oysters. The largest effect on the

  19. Thermal inactivation of enteric viruses and bioaccumulation of enteric foodborne viruses in live oysters (Crassostrea virginica)

    Human enteric viruses are one of the main causative agents of shellfish associated outbreaks. In this study, the kinetics of viral bioaccumulation in live oysters and the heat stability of the most predominant enteric viruses were determined in both tissue culture and in oyster tissues. A human nor...

  20. Growth, morphometrics and nutrient content of farmed eastern oysters, Crassostrea virginica (Gmelin), in New Hampshire, USA

    When harvested, oysters represent a removal from the ecosystem of nutrients such as nitrogen (N)and carbon (C). A number of factors potentially affect nutrient content, but a quantitative understanding across the geographical range of the eastern oysters is lacking. This study wa...

  1. Temperature-dependent persistence of human norovirus within oysters (Crassotrea virginica)

    This study characterizes the persistence of human norovirus in Eastern oysters (Crassostrea virginica) held at different seawater temperatures. Oysters were contaminated with human norovirus GI.1 (Norwalk strain 8fIIa) by exposing them to virus contaminated water at 15 degrees C, and subsequently ho...

  2. Behavior of pathogenic bacteria in the oyster, Crassostrea commercialis, during depuration, re-laying, and storage.

    Son, N T; Fleet, G H

    1980-12-01

    Oysters (Crassostrea commercials) harvested from major cultivation areas within the state of New South Wales, Australia, were commonly contaminated with low levels of the food-poisoning organisms Bacillus cereus, Clostridium perfringens, and Vibrio parahaemolyticus. Salmonella was found in oysters on only one occasion. These bacteria were cleansed from oysters during oyster purification by re-laying in a non-polluted waterway. Oysters were laboratory contaminated to levels in excess 1,000 cells per g with either B. cereus, C. perfringens, V. parahaemolyticus, Salmonella typhimurium, or S. senftenberg. These species were cleansed from such oysters during purification in a laboratory depuration unit that used ultraviolet light for sterilizing the depuration water. Escherichia coli was also cleansed from oysters under the same re-laying or depuration conditions so that its measurement alone could be used to indicate the cleansing of the above pathogenic species. The levels of these bacteria were also measured during the storage of oysters under conditions that occur during marketing. While B. cereus counts remained relatively stable during storage, the Salmonella spp. gradually decreased in numbers and C. perfringens rapidly died off. V. parahaemolyticus counts increased slightly during the first 4 days of storage, after which decreases occurred.

  3. Impact of an icy winter on the Pacific oyster (Crassostrea gigas Thunberg, 1793) populations in Scandinavia

    Strand, Åsa; Blanda, Elisa; Bodvin, Torjan

    2012-01-01

    The Pacific oyster (Crassostrea gigas) is an invasive species that has dispersed into Scandinavia during the last few decades. The objective of this study was to evaluate the effects of extreme winter conditions on the mortality of the Pacific oyster in Scandinavia. The study was done by compilin...

  4. ANTIMICROBIAL ACTIVITY OF COPPER AND ZINC ACCUMULATED BY EASTERN OYSTER AMEBOCYTES

    Fisher, William S. Submitted. Antimicrobial Activity of Copper and Zinc Accumulated by Eastern Oyster Amebocytes. J. Shellfish Res. 54 p. (ERL,GB 1196). The distribution of eastern oysters Crassostrea virginica near terrestrial watersheds has led to a general impression t...

  5. Calcium flouride (CaF2) from oyster shell as a raw material for thermoluminescence dosimeter

    Coloma, Lyra C.; Fanuga, Lyn N.; Ocreto, Cherries Ann; Rodriguez, Richita

    2006-03-01

    This study aims to develop a thermoluminescence dosimeter raw material made of calcium fluoride from locally available seashells that is suitable for personal radiation monitoring. Oyster shells were collected and grounded as powder samples and analyzed for calcium fluoride (CaF 2 ) content using XRF and XRD testing. Samples include pure CaF 2 , pure oyster shell, and oyster shells treated with acid. Based from the XRF results, natural oyster shell (w/ and w/o HNO 3 ) had high percentage of calcium about 49.64% and 47.45%, next to the pure calcium fluoride of 51.08%. X-ray diffractrogram shows that oyster sample had the nearest desired structure of CaF 2 compared with two seashells relative to the pure CaF 2 as standard materials. Results show that all of the natural oyster samples displayed TL emission glow curves at the temperature range 200-300 o C. It was also found that pure oyster sample has better TL response as compared to the treated ones. The researchers concluded that the calcium fluoride from oyster shells (without acid and heated) is a potentially good low-cost TLD raw material and may be used as an alternative for the much more expensive LiF dosimeters. (Authors)

  6. ANTIOXIDANT ENZYMES, POTENTIAL VIRULENT FACTORS, IN DIFFERENT STRAINS OF THE OYSTER PROTOZOAN PARASITE, PERKINSUS MARINUS

    The oyster protozoan parasite, Perkinsus marinus, is one of the two important parasites causing severe mortality in the eastern oysters (Crassostrea virginica) on the US east coast. Our recent study suggests that P. marinus cells and its extracellular products (ECP) could scaveng...

  7. High pressure processing with hot sauce flavoring enhances sensory quality for raw oysters (Crassostrea virginica)

    This study evaluated the feasibility of flavoring raw oysters by placing them under pressure in the presence of selected flavorings. Hand-shucked raw oysters were processed at high pressure (600 MPa), in the presence or absence of (Sriracha®) flavoring, and evaluated by a trained sensory panel 3 an...

  8. Desirability of oysters treated by high pressure processing at different temperatures and elevated pressures

    Organoleptic changes in sterile triploid oysters (Crassostrea virginica) induced by high pressure processing (HPP) were investigated using a volunteer panel. Using a 1-7 hedonic scale, where seven is “like very much”, and one is “dislike very much”, oysters were evaluated organoleptically for flavo...

  9. Coral Reef Community Composition in the Context of Disturbance History on the Great Barrier Reef, Australia

    Graham, Nicholas A. J.; Chong-Seng, Karen M.; Huchery, Cindy; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.

    2014-01-01

    Much research on coral reefs has documented differential declines in coral and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of coral reef communities across five reefs of the central Great Barrier Reef, Australia, with known disturbance histories, and assessed patterns of coral cover and community composition related to a range of other variables thought to be important for reef dynamics. Two of the reefs had not been extensively disturbed for at least 15 years prior to the surveys. Three of the reefs had been severely impacted by crown-of-thorns starfish outbreaks and coral bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed) and reef zone (slope, crest and flat) into our design, providing a comprehensive assessment of the spatial patterns in community composition on these reefs. Categorising corals into life history groupings, we document major coral community differences in the unrecovered reefs, compared to the composition and covers found on the undisturbed reefs. The recovered reef, despite having similar coral cover, had a different community composition from the undisturbed reefs, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the coral community among sites included the density of juvenile corals, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier Reef, efforts to mitigate local stressors will be imperative to encouraging coral communities to persist into

  10. Say what? Coral reef sounds as indicators of community assemblages and reef conditions

    Mooney, T. A.; Kaplan, M. B.

    2016-02-01

    Coral reefs host some of the highest diversity of life on the planet. Unfortunately, reef health and biodiversity is declining or is threatened as a result of climate change and human influences. Tracking these changes is necessary for effective resource management, yet estimating marine biodiversity and tracking trends in ecosystem health is a challenging and expensive task, especially in many pristine reefs which are remote and difficult to access. Many fishes, mammals and invertebrates make sound. These sounds are reflective of a number of vital biological processes and are a cue for settling reef larvae. Biological sounds may be a means to quantify ecosystem health and biodiversity, however the relationship between coral reef soundscapes and the actual taxa present remains largely unknown. This study presents a comparative evaluation of the soundscape of multiple reefs, naturally differing in benthic cover and fish diversity, in the U.S. Virgin Islands National Park. Using multiple recorders per reef we characterized spacio-temporal variation in biological sound production within and among reefs. Analyses of sounds recorded over 4 summer months indicated diel trends in both fish and snapping shrimp acoustic frequency bands with crepuscular peaks at all reefs. There were small but statistically significant acoustic differences among sites on a given reef raising the possibility of potentially localized acoustic habitats. The strength of diel trends in lower, fish-frequency bands were correlated with coral cover and fish density, yet no such relationship was found with shrimp sounds suggesting that fish sounds may be of higher relevance to tracking certain coral reef conditions. These findings indicate that, in spite of considerable variability within reef soundscapes, diel trends in low-frequency sound production reflect reef community assemblages. Further, monitoring soundscapes may be an efficient means of establishing and monitoring reef conditions.

  11. Impacts of Artificial Reefs and Diving Tourism

    Sandra Jakšić

    2013-10-01

    Full Text Available Coral reefs are currently endangered throughout the world. One of the main activities responsible for this is scuba-diving. Scuba-diving on coral reefs was not problematic in the begging, but due to popularization of the new sport, more and more tourists desired to participate in the activity. Mass tourism, direct contact of the tourists with the coral reefs and unprofessional behavior underwater has a negative effect on the coral reefs. The conflict between nature preservation and economy benefits related to scuba-diving tourism resulted in the creation of artificial reefs, used both to promote marine life and as tourists attractions, thereby taking the pressure off the natural coral reefs. Ships, vehicles and other large structures can be found on the coastal sea floor in North America, Australia, Japan and Europe. The concept of artificial reefs as a scuba-diving attraction was developed in Florida. The main goal was to promote aquaculture, with the popularization of scuba-diving attractions being a secondary effect. The aim of this paper is to determine the effects of artificial reefs on scuba-diving tourism, while taking into account the questionnaire carried out among 18 divers

  12. [Comparison of two nucleic acid extraction methods for norovirus in oysters].

    Yuan, Qiao; Li, Hui; Deng, Xiaoling; Mo, Yanling; Fang, Ling; Ke, Changwen

    2013-04-01

    To explore a convenient and effective method for norovirus nucleic acid extraction from oysters suitable for long-term viral surveillance. Two methods, namely method A (glycine washing and polyethylene glycol precipitation of the virus followed by silica gel centrifugal column) and method B (protease K digestion followed by application of paramagnetic silicon) were compared for their performance in norovirus nucleic acid extraction from oysters. Real-time RT-PCR was used to detect norovirus in naturally infected oysters and in oysters with induced infection. The two methods yielded comparable positive detection rates for the samples, but the recovery rate of the virus was higher with method B than with method A. Method B is a more convenient and rapid method for norovirus nucleic acid extraction from oysters and suitable for long-term surveillance of norovirus.

  13. Eastern oyster (Crassostrea virginica) δ15N as a bioindicator of nitrogen sources: Observations and modeling

    Fertig, B.; Carruthers, T.J.B.; Dennison, W.C.; Fertig, E.J.; Altabet, M.A.

    2010-01-01

    Stable nitrogen isotopes (δ 15 N) in bioindicators are increasingly employed to identify nitrogen sources in many ecosystems and biological characteristics of the eastern oyster (Crassostrea virginica) make it an appropriate species for this purpose. To assess nitrogen isotopic fractionation associated with assimilation and baseline variations in oyster mantle, gill, and muscle tissue δ 15 N, manipulative fieldwork in Chesapeake Bay and corresponding modeling exercises were conducted. This study (1) determined that five individuals represented an optimal sample size; (2) verified that δ 15 N in oysters from two locations converged after shared deployment to a new location reflecting a change in nitrogen sources; (3) identified required exposure time and temporal integration (four months for muscle, two to three months for gill and mantle); and (4) demonstrated seasonal δ 15 N increases in seston (summer) and oysters (winter). As bioindicators, oysters can be deployed for spatial interpolation of nitrogen sources, even in areas lacking extant populations.

  14. Regional restoration benchmarks for Acropora cervicornis

    Schopmeyer, Stephanie A.; Lirman, Diego; Bartels, Erich; Gilliam, David S.; Goergen, Elizabeth A.; Griffin, Sean P.; Johnson, Meaghan E.; Lustic, Caitlin; Maxwell, Kerry; Walter, Cory S.

    2017-12-01

    Coral gardening plays an important role in the recovery of depleted populations of threatened Acropora cervicornis in the Caribbean. Over the past decade, high survival coupled with fast growth of in situ nursery corals have allowed practitioners to create healthy and genotypically diverse nursery stocks. Currently, thousands of corals are propagated and outplanted onto degraded reefs on a yearly basis, representing a substantial increase in the abundance, biomass, and overall footprint of A. cervicornis. Here, we combined an extensive dataset collected by restoration practitioners to document early (1-2 yr) restoration success metrics in Florida and Puerto Rico, USA. By reporting region-specific data on the impacts of fragment collection on donor colonies, survivorship and productivity of nursery corals, and survivorship and productivity of outplanted corals during normal conditions, we provide the basis for a stop-light indicator framework for new or existing restoration programs to evaluate their performance. We show that current restoration methods are very effective, that no excess damage is caused to donor colonies, and that once outplanted, corals behave just as wild colonies. We also provide science-based benchmarks that can be used by programs to evaluate successes and challenges of their efforts, and to make modifications where needed. We propose that up to 10% of the biomass can be collected from healthy, large A. cervicornis donor colonies for nursery propagation. We also propose the following benchmarks for the first year of activities for A. cervicornis restoration: (1) >75% live tissue cover on donor colonies; (2) >80% survivorship of nursery corals; and (3) >70% survivorship of outplanted corals. Finally, we report productivity means of 4.4 cm yr-1 for nursery corals and 4.8 cm yr-1 for outplants as a frame of reference for ranking performance within programs. Such benchmarks, and potential subsequent adaptive actions, are needed to fully assess the

  15. Unseen players shape benthic competition on coral reefs.

    Barott, Katie L; Rohwer, Forest L

    2012-12-01

    Recent work has shown that hydrophilic and hydrophobic organic matter (OM) from algae disrupts the function of the coral holobiont and promotes the invasion of opportunistic pathogens, leading to coral morbidity and mortality. Here we refer to these dynamics as the (3)DAM [dissolved organic matter (DOM), direct contact, disease, algae and microbes] model. There is considerable complexity in coral-algae interactions; turf algae and macroalgae promote heterotrophic microbial overgrowth of coral, macroalgae also directly harm the corals via hydrophobic OM, whereas crustose coralline algae generally encourage benign microbial communities. In addition, complex flow patterns transport OM and pathogens from algae to downstream corals, and direct algal contact enhances their delivery. These invisible players (microbes, viruses, and OM) are important drivers of coral reefs because they have non-linear responses to disturbances and are the first to change in response to perturbations, providing near real-time trajectories for a coral reef, a vital metric for conservation and restoration. Copyright © 2012 Elsevier Ltd. All rights reserved.

  16. A Global Estimate of the Number of Coral Reef Fishers.

    Louise S L Teh

    Full Text Available Overfishing threatens coral reefs worldwide, yet there is no reliable estimate on the number of reef fishers globally. We address this data gap by quantifying the number of reef fishers on a global scale, using two approaches - the first estimates reef fishers as a proportion of the total number of marine fishers in a country, based on the ratio of reef-related to total marine fish landed values. The second estimates reef fishers as a function of coral reef area, rural coastal population, and fishing pressure. In total, we find that there are 6 million reef fishers in 99 reef countries and territories worldwide, of which at least 25% are reef gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and reef fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on coral reefs, and half of all coral reef fishers are in Southeast Asia. Coral reefs evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as reef fishers, we provide decision-makers with an important input into planning for sustainable coral reef fisheries at the appropriate scale.

  17. A Global Estimate of the Number of Coral Reef Fishers.

    Teh, Louise S L; Teh, Lydia C L; Sumaila, U Rashid

    2013-01-01

    Overfishing threatens coral reefs worldwide, yet there is no reliable estimate on the number of reef fishers globally. We address this data gap by quantifying the number of reef fishers on a global scale, using two approaches - the first estimates reef fishers as a proportion of the total number of marine fishers in a country, based on the ratio of reef-related to total marine fish landed values. The second estimates reef fishers as a function of coral reef area, rural coastal population, and fishing pressure. In total, we find that there are 6 million reef fishers in 99 reef countries and territories worldwide, of which at least 25% are reef gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and reef fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on coral reefs, and half of all coral reef fishers are in Southeast Asia. Coral reefs evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as reef fishers, we provide decision-makers with an important input into planning for sustainable coral reef fisheries at the appropriate scale.

  18. 75 FR 48934 - Coral Reef Conservation Program Implementation Guidelines

    2010-08-12

    ...-01] RIN 0648-ZC19 Coral Reef Conservation Program Implementation Guidelines AGENCY: National Oceanic... Guidelines (Guidelines) for the Coral Reef Conservation Program (CRCP or Program) under the Coral Reef... assistance for coral reef conservation projects under the Act. NOAA revised the Implementation Guidelines for...

  19. Status and review of health of Indian coral reefs

    Rajan, R.; Satyanarayan, C.; Raghunathan, C.; Koya, S.S.; Ravindran, J.; Manikandan, B.; Venkataraman, K.

    Status of reef health incorporating species-wise cover of scleractinians has been reported covering 61 stations in 29 reef locations of the four major reef regions in India as of March 2011, alongside a review of available reef health data since...

  20. Tourism, Reef Condition and Visitor Satisfaction in Watamu Marine ...

    Abstract—Reef-based tourism is known to put environmental pressure on reefs but its consequences on the ecological and economic sustainability of Marine. Protected Areas is unknown. Previous research suggests that, if reef conditions decline, then tourism on a reef will also suffer, but is this always the case? This.

  1. Patterns of coral species richness and reef connectivity in Malaysia

    Waheed, Z.

    2016-01-01

    Much remains to be discovered about the biodiversity of coral reefs in Malaysia, making this area a priority for coral reef research. This thesis aims to provide insights into the patterns of reef coral species richness and the degree of reef connectivity across Malaysia. For the species richness

  2. Intertidal oysters reach their physiological limit in a future high-CO2 world.

    Scanes, Elliot; Parker, Laura M; O'Connor, Wayne A; Stapp, Laura S; Ross, Pauline M

    2017-03-01

    Sessile marine molluscs living in the intertidal zone experience periods of internal acidosis when exposed to air (emersion) during low tide. Relative to other marine organisms, molluscs have been identified as vulnerable to future ocean acidification; however, paradoxically it has also been shown that molluscs exposed to high CO 2 environments are more resilient compared with those molluscs naive to CO 2 exposure. Two competing hypotheses were tested using a novel experimental design incorporating tidal simulations to predict the future intertidal limit of oysters in a high-CO 2 world; either high-shore oysters will be more tolerant of elevated P CO 2 because of their regular acidosis, or elevated P CO 2  will cause high-shore oysters to reach their limit. Sydney rock oysters, Saccostrea glomerata , were collected from the high-intertidal and subtidal areas of the shore and exposed in an orthogonal design to either an intertidal or a subtidal treatment at ambient or elevated P CO 2 , and physiological variables were measured. The combined treatment of tidal emersion and elevated P CO 2  interacted synergistically to reduce the haemolymph pH (pH e ) of oysters, and increase the P CO 2  in the haemolymph ( P e,CO 2 ) and standard metabolic rate. Oysters in the intertidal treatment also had lower condition and growth. Oysters showed a high degree of plasticity, and little evidence was found that intertidal oysters were more resilient than subtidal oysters. It is concluded that in a high-CO 2 world the upper vertical limit of oyster distribution on the shore may be reduced. These results suggest that previous studies on intertidal organisms that lacked tidal simulations may have underestimated the effects of elevated P CO 2 . © 2017. Published by The Company of Biologists Ltd.

  3. Evaluation of Ice Slurries as a Control for Postharvest Growth of Vibrio spp. in Oysters and Potential for Filth Contamination.

    Lydon, Keri Ann; Farrell-Evans, Melissa; Jones, Jessica L

    2015-07-01

    Raw oyster consumption is the most common route of exposure for Vibrio spp. infections in humans. Vibriosis has been increasing steadily in the United States despite efforts to reduce the incidence of the disease. Research has demonstrated that ice is effective in reducing postharvest Vibrio spp. growth in oysters but has raised concerns of possible contamination of oyster meat by filth (as indicated by the presence of fecal coliform bacteria or Clostridium perfringens). This study examined the use of ice slurries (oysters, from 23.9°C (75°F) to 10°C (50°F) within 12 min. The initial bacterial loads in the ice slurry waters were near the limits of detection. Following repeated dipping of oysters into ice slurries, water samples exhibited significant (P oyster meat, however, was unchanged after 15 min of submergence, with no significant differences (P oysters to minimize Vibrio growth.

  4. Benthic foraminifera baseline assemblages from a coastal nearshore reef complex on the central Great Barrier Reef

    Johnson, Jamie; Perry, Chris; Smithers, Scott; Morgan, Kyle

    2016-04-01

    Declining water quality due to river catchment modification since European settlement (c. 1850 A.D.) represents a major threat to the health of coral reefs on Australia's Great Barrier Reef (GBR), particularly for those located in the coastal waters of the GBR's inner-shelf. These nearshore reefs are widely perceived to be most susceptible to declining water quality owing to their close proximity to river point sources. Despite this, nearshore reefs have been relatively poorly studied with the impacts and magnitudes of environmental degradation still remaining unclear. This is largely due to ongoing debates concerning the significance of increased sediment yields against naturally high background sedimentary regimes. Benthic foraminifera are increasingly used as tools for monitoring environmental and ecological change on coral reefs. On the GBR, the majority of studies have focussed on the spatial distributions of contemporary benthic foraminiferal assemblages. While baseline assemblages from other environments (e.g. inshore reefs and mangroves) have been described, very few records exist for nearshore reefs. Here, we present preliminary results from the first palaeoecological study of foraminiferal assemblages of nearshore reefs on the central GBR. Cores were recovered from the nearshore reef complex at Paluma Shoals using percussion techniques. Recovery was 100%, capturing the entire Holocene reef sequence of the selected reef structures. Radiocarbon dating and subsequent age-depth modelling techniques were used to identify reef sequences pre-dating European settlement. Benthic foraminifera assemblages were reconstructed from the identified sequences to establish pre-European ecological baselines with the aim of providing a record of foraminiferal distribution during vertical reef accretion and against which contemporary ecological change may be assessed.

  5. Global warming and coral reefs

    Wafar, M.V.M.

    , notably at Ratnagiri. Malwan. Redi Port and Vizhingam. Relic reefs with living herm<:ltypic corals at depths ranging fror:l 25 to 45m are the Gaves hani Bank off~\\angalore,and the submerged banks (Bass<:ls de Pedro. Sesostris Bank and Cora Divh... the snore (Qaslm and Wafar, 1979). The other representative Sea le\\lel Variation 417 of the extensive reelS of the outer shelf that survived Pleistocene drowning is the Gaveshani Bank, fanhc: south (J 3° 24' N; 73° 45' E), about 100 km off \\1 ar:ga lore...

  6. Geomorphology and sediment transport on a submerged back-reef sand apron: One Tree Reef, Great Barrier Reef

    Harris, Daniel L.; Vila-Concejo, Ana; Webster, Jody M.

    2014-10-01

    Back-reef sand aprons are conspicuous and dynamic sedimentary features in coral reef systems. The development of these features influences the evolution and defines the maturity of coral reefs. However, the hydrodynamic processes that drive changes on sand aprons are poorly understood with only a few studies directly assessing sediment entrainment and transport. Current and wave conditions on a back-reef sand apron were measured during this study and a digital elevation model was developed through topographic and bathymetric surveying of the sand apron, reef flats and lagoon. The current and wave processes that may entrain and transport sediment were assessed using second order small amplitude (Stokes) wave theory and Shields equations. The morphodynamic interactions between current flow and geomorphology were also examined. The results showed that sediment transport occurs under modal hydrodynamic conditions with waves the main force entraining sediment rather than average currents. A morphodynamic relationship between current flow and geomorphology was also observed with current flow primarily towards the lagoon in shallow areas of the sand apron and deeper channel-like areas directing current off the sand apron towards the lagoon or the reef crest. These results show that the short-term mutual interaction of hydrodynamics and geomorphology in coral reefs can result in morphodynamic equilibrium.

  7. Transcriptome of American oysters, Crassostrea virginica, in response to bacterial challenge: insights into potential mechanisms of disease resistance.

    McDowell, Ian C; Nikapitiya, Chamilani; Aguiar, Derek; Lane, Christopher E; Istrail, Sorin; Gomez-Chiarri, Marta

    2014-01-01

    The American oyster Crassostrea virginica, an ecologically and economically important estuarine organism, can suffer high mortalities in areas in the Northeast United States due to Roseovarius Oyster Disease (ROD), caused by the gram-negative bacterial pathogen Roseovarius crassostreae. The goals of this research were to provide insights into: 1) the responses of American oysters to R. crassostreae, and 2) potential mechanisms of resistance or susceptibility to ROD. The responses of oysters to bacterial challenge were characterized by exposing oysters from ROD-resistant and susceptible families to R. crassostreae, followed by high-throughput sequencing of cDNA samples from various timepoints after disease challenge. Sequence data was assembled into a reference transcriptome and analyzed through differential gene expression and functional enrichment to uncover genes and processes potentially involved in responses to ROD in the American oyster. While susceptible oysters experienced constant levels of mortality when challenged with R. crassostreae, resistant oysters showed levels of mortality similar to non-challenged oysters. Oysters exposed to R. crassostreae showed differential expression of transcripts involved in immune recognition, signaling, protease inhibition, detoxification, and apoptosis. Transcripts involved in metabolism were enriched in susceptible oysters, suggesting that bacterial infection places a large metabolic demand on these oysters. Transcripts differentially expressed in resistant oysters in response to infection included the immune modulators IL-17 and arginase, as well as several genes involved in extracellular matrix remodeling. The identification of potential genes and processes responsible for defense against R. crassostreae in the American oyster provides insights into potential mechanisms of disease resistance.

  8. Facilitation in Caribbean coral reefs: high densities of staghorn coral foster greater coral condition and reef fish composition.

    Huntington, Brittany E; Miller, Margaret W; Pausch, Rachel; Richter, Lee

    2017-05-01

    Recovery of the threatened staghorn coral (Acropora cervicornis) is posited to play a key role in Caribbean reef resilience. At four Caribbean locations (including one restored and three extant populations), we quantified characteristics of contemporary staghorn coral across increasing conspecific densities, and investigated a hypothesis of facilitation between staghorn coral and reef fishes. High staghorn densities in the Dry Tortugas exhibited significantly less partial mortality, higher branch growth, and supported greater fish abundances compared to lower densities within the same population. In contrast, partial mortality, branch growth, and fish community composition did not vary with staghorn density at the three other study locations where staghorn densities were lower overall. This suggests that density-dependent effects between the coral and fish community may only manifest at high staghorn densities. We then evaluated one facilitative mechanism for such density-dependence, whereby abundant fishes sheltering in dense staghorn aggregations deliver nutrients back to the coral, fueling faster coral growth, thereby creating more fish habitat. Indeed, dense staghorn aggregations within the Dry Tortugas exhibited significantly higher growth rates, tissue nitrogen, and zooxanthellae densities than sparse aggregations. Similarly, higher tissue nitrogen was induced in a macroalgae bioassay outplanted into the same dense and sparse aggregations, confirming greater bioavailability of nutrients at high staghorn densities. Our findings inform staghorn restoration efforts, suggesting that the most effective targets may be higher coral densities than previously thought. These coral-dense aggregations may reap the benefits of positive facilitation between the staghorn and fish community, favoring the growth and survivorship of this threatened species.

  9. Diving down the reefs? Intensive diving tourism threatens the reefs of the northern Red Sea

    Hasler-Sheetal, Harald; Ott, Jörg A.

    2008-01-01

    Intensive recreational SCUBA diving threatens coral reef ecosystems. The reefs at Dahab, South Sinai, Egypt, are among the world’s most dived (>30,000dives y−1). We compared frequently dived sites to sites with no or little diving. Benthic communities and condition of corals were examined...... to intensive SCUBA diving showed a significantly higher number of broken and damaged corals and significantly lower coral cover. Reef crest coral communities were significantly more affected than those of the reef slope: 95% of the broken colonies were branching ones. No effect of diving on the abundance...... by the point intercept sampling method in the reef crest zone (3 m) and reef slope zone (12 m). Additionally, the abundance of corallivorous and herbivorous fish was estimated based on the visual census method. Sediments traps recorded the sedimentation rates caused by SCUBA divers. Zones subject...

  10. 3D CENTRAL LINE EXTRACTION OF FOSSIL OYSTER SHELLS

    A. Djuricic

    2016-06-01

    Full Text Available Photogrammetry provides a powerful tool to digitally document protected, inaccessible, and rare fossils. This saves manpower in relation to current documentation practice and makes the fragile specimens more available for paleontological analysis and public education. In this study, high resolution orthophoto (0.5 mm and digital surface models (1 mm are used to define fossil boundaries that are then used as an input to automatically extract fossil length information via central lines. In general, central lines are widely used in geosciences as they ease observation, monitoring and evaluation of object dimensions. Here, the 3D central lines are used in a novel paleontological context to study fossilized oyster shells with photogrammetric and LiDAR-obtained 3D point cloud data. 3D central lines of 1121 Crassostrea gryphoides oysters of various shapes and sizes were computed in the study. Central line calculation included: i Delaunay triangulation between the fossil shell boundary points and formation of the Voronoi diagram; ii extraction of Voronoi vertices and construction of a connected graph tree from them; iii reduction of the graph to the longest possible central line via Dijkstra’s algorithm; iv extension of longest central line to the shell boundary and smoothing by an adjustment of cubic spline curve; and v integration of the central line into the corresponding 3D point cloud. The resulting longest path estimate for the 3D central line is a size parameter that can be applied in oyster shell age determination both in paleontological and biological applications. Our investigation evaluates ability and performance of the central line method to measure shell sizes accurately by comparing automatically extracted central lines with manually collected reference data used in paleontological analysis. Our results show that the automatically obtained central line length overestimated the manually collected reference by 1.5% in the test set, which

  11. D Central Line Extraction of Fossil Oyster Shells

    Djuricic, A.; Puttonen, E.; Harzhauser, M.; Mandic, O.; Székely, B.; Pfeifer, N.

    2016-06-01

    Photogrammetry provides a powerful tool to digitally document protected, inaccessible, and rare fossils. This saves manpower in relation to current documentation practice and makes the fragile specimens more available for paleontological analysis and public education. In this study, high resolution orthophoto (0.5 mm) and digital surface models (1 mm) are used to define fossil boundaries that are then used as an input to automatically extract fossil length information via central lines. In general, central lines are widely used in geosciences as they ease observation, monitoring and evaluation of object dimensions. Here, the 3D central lines are used in a novel paleontological context to study fossilized oyster shells with photogrammetric and LiDAR-obtained 3D point cloud data. 3D central lines of 1121 Crassostrea gryphoides oysters of various shapes and sizes were computed in the study. Central line calculation included: i) Delaunay triangulation between the fossil shell boundary points and formation of the Voronoi diagram; ii) extraction of Voronoi vertices and construction of a connected graph tree from them; iii) reduction of the graph to the longest possible central line via Dijkstra's algorithm; iv) extension of longest central line to the shell boundary and smoothing by an adjustment of cubic spline curve; and v) integration of the central line into the corresponding 3D point cloud. The resulting longest path estimate for the 3D central line is a size parameter that can be applied in oyster shell age determination both in paleontological and biological applications. Our investigation evaluates ability and performance of the central line method to measure shell sizes accurately by comparing automatically extracted central lines with manually collected reference data used in paleontological analysis. Our results show that the automatically obtained central line length overestimated the manually collected reference by 1.5% in the test set, which is deemed

  12. Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

    Hochberg, E. J.

    2016-02-01

    Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

  13. Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

    Rafael A. Magris; Alana Grech; Robert L. Pressey

    2018-01-01

    Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal de...

  14. Increases in the amounts of Vibrio spp. in oysters upon addition of exogenous bacteria.

    Froelich, Brett; Oliver, James

    2013-09-01

    The bacterial pathogen Vibrio vulnificus is found naturally in brackish coastal waters but can be greatly concentrated by filter-feeding organisms such as shellfish. Numerous experiments in which exogenous V. vulnificus cells are added to oysters in an attempt to measure uptake and depuration have been performed. In nearly all cases, results have shown that laboratory-grown bacteria are rapidly taken up by the oysters but ultimately eliminated, while naturally present Vibrio populations in oysters are resistant to depuration. In this study, oysters harvested during winter months, with low culturable Vibrio concentrations, were incubated in aquaria supplemented with strains of V. vulnificus that were either genotypically or phenotypically distinct from the background bacteria. These exogenous cells were eliminated from the oysters, as previously seen, but other vibrios already inhabiting the oysters responded to the V. vulnificus inoculum by rapidly increasing in number and maintaining a large stable population. The presence of such an oyster-adapted Vibrio population would be expected to prevent colonization by exogenous V. vulnificus cells, thus explaining the rapid depuration of these added bacteria.

  15. Proteomic analysis of Sydney Rock oysters (Saccostrea glomerata) exposed to metal contamination in the field

    Thompson, Emma L.; Taylor, Daisy A.; Nair, Sham V.; Birch, Gavin; Hose, Grant C.; Raftos, David A.

    2012-01-01

    This study used proteomics to assess the impacts of metal contamination in the field on Sydney Rock oysters. Oysters were transplanted into Lake Macquarie, NSW, for two weeks in both 2009 and 2010. Two-dimensional electrophoresis identified changes in protein expression profiles of oyster haemolymph between control and metal contaminated sites. There were unique protein expression profiles for each field trial. Principal components analysis attributed these differences in oyster proteomes to the different combinations and concentrations of metals and other environmental variables present during the three field trials. Identification of differentially expressed proteins showed that proteins associated with cytoskeletal activity and stress responses were the most commonly affected biological functions in the Sydney Rock oyster. Overall, the data show that proteomics combined with multivariate analysis has the potential to link the effects of contaminants with biological consequences. - Highlights: ► Sydney Rock oyster haemolymph was analysed by proteomics after metal exposure in 3 field trials. ► 2-DE analysis was used to compare protein profiles between control and contaminated sites. ► Different protein expression profiles were revealed per field trial. ► Principal components analysis attributed profiles to different suites of metals and environmental variables per trial. ► The study highlights the need to do multiple field trials and to combine proteomic and enviro. data. - This study used proteomics to analyse impacts of metal contamination on Sydney Rock oyster (Saccostrea glomerata) haemolymph in multiple field trials.

  16. Annual dose of Taiwanese from the ingestion of 210Po in oysters.

    Lee, Hsiu-wei; Wang, Jeng-Jong

    2013-03-01

    Oysters around the coast of Taiwan were collected, dried, spiked with a (209)Po tracer for yield, digested with concentrated HNO(3) and H(2)O(2), and finally dissolved in 0.5 N HCl. The polonium was then spontaneously deposited onto a silver disc, and the activity of (210)Po was measured using an alpha spectrum analyzer equipped with a silicon barrier detector. Meanwhile, the internal effective dose of (210)Po coming from the intake of oysters by Taiwanese was evaluated. The results of the present study indicate that (210)Po average activity concentrations ranged from 23.4 ± 0.4 to 126 ± 94 Bq kg(-1) of fresh oysters. The oysters coming from Penghu island and Kinmen island regions contain higher concentrations of (210)Po in comparison with oysters from other regions of Taiwan. The value of (210)Po weighted average activity concentrations for all oyster samples studied is 25.9 Bq kg(-1). The annual effective dose of Taiwanese due to the ingestion of (210)Po in oysters was estimated to be 4.1 × 10(-2) mSv y(-1). Copyright © 2013. Published by Elsevier Ltd.

  17. The role of tissue-specific microbiota in initial establishment success of Pacific oysters.

    Lokmer, Ana; Kuenzel, Sven; Baines, John F; Wegner, Karl Mathias

    2016-03-01

    Microbiota can have positive and negative effects on hosts depending on the environmental conditions. Therefore, it is important to decipher host-microbiota-environment interactions, especially under natural conditions exerting (a)biotic stress. Here, we assess the relative importance of microbiota in different tissues of Pacific oyster for its successful establishment in a new environment. We transplanted oysters from the Southern to the Northern Wadden Sea and controlled for the effects of resident microbiota by administering antibiotics to half of the oysters. We then followed survival and composition of haemolymph, mantle, gill and gut microbiota in local and translocated oysters over 5 days. High mortality was recorded only in non-antibiotic-treated translocated oysters, where high titres of active Vibrio sp. in solid tissues indicated systemic infections. Network analyses revealed the highest connectivity and a link to seawater communities in the haemolymph microbiota. Since antibiotics decreased modularity and increased connectivity of the haemolymph-based networks, we propose that community destabilization in non-treated translocated oysters could be attributed to interactions between resident and external microbiota, which in turn facilitated passage of vibrios into solid tissues and invoked disease. These interactions of haemolymph microbiota with the external and internal environment may thus represent an important component of oyster fitness. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  18. Epizootiology of Perkinsus sp. inCrassostrea gasar oysters in polyculture with shrimps in northeastern Brazil

    Patricia Mirella da Silva

    2016-03-01

    Full Text Available Abstract Bivalve culture is of considerable economic and social interest in northeastern (NE Brazil. The polyculture is an alternative approach to traditional monoculture for reducing the environmental impact of shrimp farming and improving oyster culture. Perkinsus marinus andPerkinsus olseni were found infecting oysters in NE Brazil and can threaten oyster production. This study evaluatedPerkinsus spp. occurrence in Crassostrea gasar during all production stages. Oyster spats were produced in a hatchery and grown in shrimp ponds in Rio Grande do Norte state.Perkinsus spp. were surveyed by Ray’s fluid thioglycollate medium and confirmed by polymerase chain reaction. Prevalence and intensity of infection were determined in oysters until they reached 7 cm. Results showed that the broodstock was already infected by Perkinsus (60%, but the derived spats were Perkinsus-free. Oyster spats acquired Perkinsus infection when transferred to ponds. The prevalence gradually increased in the seven months following placement in ponds (73%, and then decreased to 17% by the tenth month. The infections were initially mild, but intensity increased at the final growth stage. In conclusion, it is possible to produce Perkinsus-free C. gasar oyster spats from infected broodstock, and their culture in shrimp ponds is feasible.

  19. Effects of a thermal effluent on the reproduction of the American oyster

    Tinsman, J.C.; Tinsman, S.G.; Maurer, D.

    1976-01-01

    Oysters were sampled from September 1970 to September 1972 from two stations in Indian River Bay, Delaware, for histological examination. Station 1 (control) was located near the intake of the Delmarva Power and Light Company's fossil-fuel plant in Millsboro, Del. Station 2 (effluent) was 2.5 km east of the plant at the mouth of Island Creek. A combination of classical and quantitative methods was used to document changes in the developmental cycle of oysters resulting from the influence of a thermal effluent. Oysters in the effluent showed precocious gonadal development during the spring, but the time of maximum ripeness and spawning activity was the same at both stations. An extension of the spawning season for several weeks in September was noted for oysters in the effluent. During 1972, oysters in the thermal effluent showed a significantly lower level of gonadal development than did controls. Since this season of decreased reproductive amplitude corresponds with a period of high mortalities among effluent oysters, it seems likely that these oysters were thermally stressed, requiring more energy for maintenance and leaving less available for reproduction

  20. Incorporation of metabolites into glycogen and lipids of the oyster, crassostrea virginica

    Swift, M.L.; Humphrey, C.L.

    1987-01-01

    Groups of oysters, either fed or unfed, were exposed to U- 14 C labelled D-glucose, L-asp, L-leu, L-ala or acetate for 6 hrs. Except for the glucose trials, the disappearance of radioactivity from the saline of the unfed oysters was greater (83%) than for the fed animals (65%). With glucose, 88% of the radioactivity disappeared in each trial. The specific radioactivity of glycogen isolated from oysters exposed to labelled glucose, asp and ala was 1283, 468 and 8.22 dpm/mg glycogen respectively. Radioactivity was found primarily in the triacylglycerols and phospholipids (PL) in fed oysters and in PL only in unfed oysters. Phosphatidyl choline, phosphatidyl ethanolamine, and a fraction containing phosphatidyl serine and phosphatidyl inositol, had 32%, 25% and 35-40% of the radioactivity respectively. Incorporation of total radioactivity into PL was 70% lower in unfed vs. fed trials, but the distribution of counts among the phospholipids classes was unchanged. Glycogenesis does not appear to be a significant pathway in the oyster. Apparently well-fed oysters are able to store excess dietary calories as lipid. During periods of starvation exogenous small metabolites along with glucose from glycogen are catabolized

  1. Role of bacteria in bioaccumulation of mercury in the oyster Crassostrea virginica

    Sayler, G.S.; Nelson, J.D. Jr.; Colwell, R.R.

    1975-01-01

    An investigation of mercury-resistant bacteria was undertaken to determine their role in the accumulation of mercury in a simplified food chain. Oysters (Crassostrea virginica) were maintained in a closed system, sealed aquarium with stirred, aerated water containing 10 μg of 203 HgCl 2 per liter. Uptake of 203 Hg by oysters held under control conditions was compared with that of 203 Hg uptake by oysters under similar conditions except that mercury-accumulating and mercury-metabolizing species of Pseudomonsa, isolated from Chesapeake Bay, were added to the experimental oysters. After incubation for 4 days, the major portion of the 203 Hg in the water column was found to be associated with the microparticulate fraction, corresponding to a rise in total viable count. Mercury accumulation in the oysters was significantly higher in the gill and fisceral tissue than other tissues. Mercury concentrations were 200 times greater in tissue fractions of oysters dosed with mercury-metabolizing bacteria compared with the oysters held under control conditions without mercury-metabolizing bacteria. (U.S.)

  2. Parasites infecting the cultured oyster Crassostrea gasar (Adanson, 1757) in Northeast Brazil.

    Queiroga, Fernando Ramos; Vianna, Rogério Tubino; Vieira, Cairé Barreto; Farias, Natanael Dantas; Da Silva, Patricia Mirella

    2015-05-01

    The oyster Crassostrea gasar is a species widely used as food and a source of income for the local population of the estuaries of Northeast Brazil. Perkinsus marinus and Perkinsus olseni are deleterious parasites for oyster farming and were recently detected in Brazil. In this study, a histopathologic survey of the oyster C. gasar cultured in the estuary of the River Mamanguape (Paraíba State) was performed. Adult oysters were collected in December 2011 and March, May, August and October 2012 and processed for histology and Perkinsus sp. identification by molecular analyses. Histopathological analysis revealed the presence of parasitic organisms including viral gametocytic hypertrophy, prokaryote-like colonies, protozoans (Perkinsus sp. and Nematopsis sp.) and metazoans (Tylocephalum sp. and cestodes). Other commensal organisms were also detected (the protozoan Ancistrocoma sp. and the turbellarian Urastoma sp.). The protozoan parasite Perkinsus sp. had the highest overall prevalence among the symbiotic organisms studied (48.9%), followed by Nematopsis sp. (36.3%). The other organisms were only sporadically observed. Only the protozoan Perkinsus sp. caused alterations in the oysters' infected organs. Molecular analyses confirmed the presence of P. marinus, P. olseni and Perkinsus beihaiensis infecting the oyster C. gasar. This is the first report of P. beihaiensis in this oyster species.

  3. Biofiltration, growth and body composition of oyster Crassostrea rhizophorae in effluents from shrimp Litopenaeus vannamei1

    Rafael Vieira de Azevedo

    Full Text Available The objective of this study was to use oyster as biofilter to improve the quality of effluent from shrimp farming and to assess its growth performance and body composition. It was distributed 1,080 oysters into lanterns in fiberglass tanks (170 L in a completely randomized design with three treatments (0, 60 and 120 oysters and six replicates. It was used the effluent from the sedimentation tank. It was measured weekly: temperature, salinity, dissolved oxygen and pH, and it was analyzed ammonia-N, nitrite-N, nitrate-N, orthophosphate-P, suspended solids and chlorophyll-α of the input effluent. The control tanks (without oysters were more efficient at removing ammonia-N, nitrite-N, nitrate-N and orthophosphate-P. The tanks containing oysters were more efficient at removing suspended solids and chlorophyll-α. Stocking density influenced the height growth of oysters, but not width. Wet and daily weight, condition and yield index were not affected by stocking density, and a significant increase in comparison to the initials values was observed. Body composition was not affected by stocking density, and a significant difference (p0.05. Under the conditions evaluated, the oyster Crassostrea rhizophorae improves water quality and presents growth rates and body composition similar to those obtained in traditional crops.

  4. Angiotensin I-Converting Enzyme Inhibitor Derived from Cross-Linked Oyster Protein

    Cheng-Liang Xie

    2014-01-01

    Full Text Available Following cross-linking by microbial transglutaminase, modified oyster proteins were hydrolyzed to improve inhibitory activity against angiotensin-converting enzyme (ACE inhibitory activity with the use of a single protease, or a combination of six proteases. The oyster hydrolysate with the lowest 50% ACE inhibitory concentration (IC50 of 0.40 mg/mL was obtained by two-step hydrolysis of the cross-linked oyster protein using Protamex and Neutrase. Five ACE inhibitory peptides were purified from the oyster hydrolysate using a multistep chromatographic procedure comprised of ion-exchange, size exclusion, and reversed-phase liquid chromatography. Their sequences were identified as TAY, VK, KY, FYN, and YA, using automated Edman degradation and mass spectrometry. These peptides were synthesized, and their IC50 values were measured to be 16.7, 29.0, 51.5, 68.2, and 93.9 μM, respectively. Toxicity of the peptides on the HepG2 cell line was not detected. The oyster hydrolysate also significantly decreased the systolic blood pressure of spontaneously hypertensive rats (SHR. The antihypertensive effect of the oyster hydrolysate on SHR was rapid and long-lasting, compared to commercially obtained sardine hydrolysate. These results suggest that the oyster hydrolysate could be a source of effective nutraceuticals against hypertension.

  5. The invasive Pacific oyster, Crassostrea gigas, in Scandinavia coastal waters

    Dolmer, Per; Holm, Mark Wejlemann; Strand, Åsa

    visualized the need for a continued collaboration between scientists in the Scandinavian countries, as the bio-invasion is a cross-border issue and management actions then have to be synchronized, and based on a “state of the art” knowledge of the Scandinavian bio-invasion of the species. The risk assessment......A massive invasion of the Pacific oyster, Crassostrea gigas , has occurred in Scandinavia during the last decade. The introduction and dispersal was described through collaboration between scientists from Sweden, Denmark and Norway. This work has been followed up by national activities that clearly...

  6. Bioaccumulation factor of tritium in oyster and tilapia

    Garcia, T.Y.; Juan, N.B.

    1984-01-01

    This paper reports on the bioaccumulation factor as well as the residence time of tritium in marine organisms such as tilapia fish (Tilapia mossambica) and oyster (Crassostrea iredalei) reared under laboratory conditions. The organisms were submerged in aquarium water containing tritium with specific activity of 1.0 nCi/ml. The samples were analyzed for tissue-free water tritium (TFWT) by freeze drying and for tissue-bound tritium (TBT) by combustion methods. Tritiated water collected was assayed using the liquid scintillation counting technique. (author)

  7. Contrasting impacts of ocean acidification and warming on the molecular responses of CO2-resilient oysters.

    Goncalves, Priscila; Thompson, Emma L; Raftos, David A

    2017-06-02

    This study characterises the molecular processes altered by both elevated CO 2 and increasing temperature in oysters. Differences in resilience of marine organisms against the environmental stressors associated with climate change will have significant implications for the sustainability of coastal ecosystems worldwide. Some evidence suggests that climate change resilience can differ between populations within a species. B2 oysters represent a unique genetic resource because of their capacity to better withstand the impacts of elevated CO 2 at the physiological level, compared to non-selected oysters from the same species (Saccostrea glomerata). Here, we used proteomic and transcriptomic analysis of gill tissue to evaluate whether the differential response of B2 oysters to elevated CO 2 also extends to increased temperature. Substantial and distinctive effects on protein concentrations and gene expression were evident among B2 oysters responding to elevated CO 2 or elevated temperature. The combination of both stressors also altered oyster gill proteomes and gene expression. However, the impacts of elevated CO 2 and temperature were not additive or synergistic, and may be antagonistic. The data suggest that the simultaneous exposure of CO 2 -resilient oysters to near-future projected ocean pH and temperature results in complex changes in molecular processes in order to prevent stress-induced cellular damage. The differential response of B2 oysters to the combined stressors also indicates that the addition of thermal stress may impair the resilience of these oysters to decreased pH. Overall, this study reveals the intracellular mechanisms that might enable marine calcifiers to endure the emergent, adverse seawater conditions resulting from climate change.

  8. Controlling Vibrio vulnificus and spoilage bacteria in fresh shucked oysters using natural antimicrobials.

    Mahmoud, B S M

    2014-01-01

    This study evaluated the efficacy of grape seed extract (GE), citric acid (CA) and lactic acid (LA) on the inactivation of Vibrio vulnificus and inherent microflora in fresh shucked oysters. The minimum inhibitory concentration (MIC) of GE, CA or LA against V. vulnificus was determined. Furthermore, the shucked oysters were artificially inoculated with V. vulnificus. The inoculated shucked oysters (25 g) were then dipped in 250 ml GE, CA or LA solutions for 10 min. The population of V. vulnificus in shucked oysters was determined. The effects of the treatments with GE, CA or LA solutions on the inherent microbiota in fresh shucked oysters during storage at 5°C for 20 days were also studied. The MICs of GE, CA or LA against V. vulnificus were 10.0, 5.0 or 1.0 mg ml(-1), respectively. The concentrations of 500, 300 or 150 mg ml(-1) GE, CA or LA solutions were needed to reduce the population of V. vulnificus to below the detection level (1.0 log g(-1)). Treatment with 500, 300, 150 mg ml(-1) GE, CA or LA significantly reduced the initial inherent microbiota in fresh shucked oysters, and inherent levels were significantly (P Oysters filter large volume of seawater during their feeding activities that concentrate bacteria such as Vibrio vulnificus in their body. The presence of V. vulnificus in oysters has a serious impact on public health and international trade. There is increasing concern over the use of chemical preservatives. Furthermore, the food industry is looking for new natural preservation methods. This study indicated that lactic acid and citric acid wash solutions could offer an inexpensive, natural and strong approach to control V. vulnificus and spoilage bacteria in fresh shucked for the oyster industry. © 2013 The Society for Applied Microbiology.

  9. Nutrient bioassimilation capacity of aquacultured oysters: quantification of an ecosystem service.

    Higgins, Colleen B; Stephenson, Kurt; Brown, Bonnie L

    2011-01-01

    Like many coastal zones and estuaries, the Chesapeake Bay has been severely degraded by cultural eutrophication. Rising implementation costs and difficulty achieving nutrient reduction goals associated with point and nonpoint sources suggests that approaches supplemental to source reductions may prove useful in the future. Enhanced oyster aquaculture has been suggested as one potential policy initiative to help rid the Bay waters of excess nutrients via harvest of bioassimilated nutrients. To assess this potential, total nitrogen (TN), total phosphorous (TP), and total carbon (TC) content were measured in oyster tissue and shell at two floating-raft cultivation sites in the Chesapeake Bay. Models were developed based on the common market measurement of total length (TL) for aquacultured oysters, which was strongly correlated to the TN (R2 = 0.76), TP (R2 = 0.78), and TC (R2 = 0.76) content per oyster tissue and shell. These models provide resource managers with a tool to quantify net nutrient removal. Based on model estimates, 10(6) harvest-sized oysters (76 mm TL) remove 132 kg TN, 19 kg TP, and 3823 kg TC. In terms of nutrients removed per unit area, oyster harvest is an effective means of nutrient removal compared with other nonpoint source reduction strategies. At a density of 286 oysters m(-2), assuming no mortality, harvest size nutrient removal rates can be as high as 378 kg TN ha(-1), 54 kg TP ha(-1), and 10,934 kg TC ha(-1) for 76-mm oysters. Removing 1 t N from the Bay would require harvesting 7.7 million 76-mm TL cultivated oysters.

  10. Mortalities of Eastern and Pacific oyster Larvae caused by the pathogens Vibrio coralliilyticus and Vibrio tubiashii.

    Richards, Gary P; Watson, Michael A; Needleman, David S; Church, Karlee M; Häse, Claudia C

    2015-01-01

    Vibrio tubiashii is reported to be a bacterial pathogen of larval Eastern oysters (Crassostrea virginica) and Pacific oysters (Crassostrea gigas) and has been associated with major hatchery crashes, causing shortages in seed oysters for commercial shellfish producers. Another bacterium, Vibrio coralliilyticus, a well-known coral pathogen, has recently been shown to elicit mortality in fish and shellfish. Several strains of V. coralliilyticus, such as ATCC 19105 and Pacific isolates RE22 and RE98, were misidentified as V. tubiashii until recently. We compared the mortalities caused by two V. tubiashii and four V. coralliilyticus strains in Eastern and Pacific oyster larvae. The 50% lethal dose (LD50) of V. coralliilyticus in Eastern oysters (defined here as the dose required to kill 50% of the population in 6 days) ranged from 1.1 × 10(4) to 3.0 × 10(4) CFU/ml seawater; strains RE98 and RE22 were the most virulent. This study shows that V. coralliilyticus causes mortality in Eastern oyster larvae. Results for Pacific oysters were similar, with LD50s between 1.2 × 10(4) and 4.0 × 10(4) CFU/ml. Vibrio tubiashii ATCC 19106 and ATCC 19109 were highly infectious toward Eastern oyster larvae but were essentially nonpathogenic toward healthy Pacific oyster larvae at dosages of ≥1.1 × 10(4) CFU/ml. These data, coupled with the fact that several isolates originally thought to be V. tubiashii are actually V. coralliilyticus, suggest that V. coralliilyticus has been a more significant pathogen for larval bivalve shellfish than V. tubiashii, particularly on the U.S. West Coast, contributing to substantial hatchery-associated morbidity and mortality in recent years. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  11. Restoration of Gooseberry Creek

    Jonathan W. Long

    2000-01-01

    Grazing exclusion and channel modifications were used to restore wet meadows along a stream on the Fort Apache Indian Reservation. The efforts are reestablishing functional processes to promote long-term restoration of wetland health and species conservation.

  12. Hemolymph chemistry and histopathological changes in Pacific oysters (Crassostrea gigas) in response to low salinity stress.

    Knowles, Graeme; Handlinger, Judith; Jones, Brian; Moltschaniwskyj, Natalie

    2014-09-01

    This study described seasonal differences in the histopathological and hemolymph chemistry changes in different family lines of Pacific oysters, Crassostrea gigas, in response to the stress of an abrupt change to low salinity, and mechanical grading. The most significant changes in pallial cavity salinity, hemolymph chemistry and histopathological findings occurred in summer at low salinity. In summer (water temperature 18°C) at low salinity, 9 (25.7% of full salinity), the mean pallial cavity salinity in oysters at day 3 was 19.8±1.6 (SE) and day 10 was 22.8±1.6 (SE) lower than oysters at salinity 35. Associated with this fall in pallial cavity salinity, mean hemolymph sodium for oysters at salinity 9 on day 3 and 10 were 297.2mmol/L±20(SE) and 350.4mmol/L±21.3(SE) lower than oysters at salinity 35. Similarly mean hemolymph potassium in oysters held at salinity 9 at day 3 and 10 were 5.6mmol/L±0.6(SE) and 7.9mmol/L±0.6 (SE) lower than oysters at salinity 35. These oysters at low salinity had expanded intercellular spaces and significant intracytoplasmic vacuolation distending the cytoplasm of epithelial cells in the alimentary tract and kidney and hemocyte infiltrate (diapedesis) within the alimentary tract wall. In contrast, in winter (water temperature 8°C) oyster mean pallial cavity salinity only fell at day 10 and this was by 6.0±0.6 (SE) compared to that of oysters at salinity 35. There were limited histopathological changes (expanded intercellular spaces and moderate intracytoplasmic vacuolation of renal epithelial cells) in these oysters at day 10 in low salinity. Mechanical grading and family line did not influence the oyster response to sudden low salinity. These findings provide additional information for interpretation of non-lethal, histopathological changes associated with temperature and salinity variation. Copyright © 2014 Elsevier Inc. All rights reserved.

  13. [History of oyster as drug from the origin to the 21st century].

    Bonnemain, Bruno

    2015-06-01

    Since Antiquity, oyster is a subject of interest and medical use, as indicated by Oribiase and Galien. From the 17th century, this unique drug was proposed by physicians for various diseases, and more often for (la rage). One could think that that drug disappeared at the 20th and 21st centuries. But we can observe that it was still recommended by several authors as drug. Still today, companies offer oyster under various forms for allopathic and homeopathic treatments, as well as for food supplement. Research are ongoing to discover active substances within oyster and their potential medical interests.

  14. Functional groupings and food web of an artificial reef used for sea cucumber aquaculture in northern China

    Xu, Qinzeng; Zhang, Libin; Zhang, Tao; Zhang, Xuelei; Yang, Hongsheng

    2017-01-01

    Artificial reef is considered as a useful tool to remodel habitats in coastal and estuarine area. Some artificial reefs (ARs) were conducted in Shandong Peninsula for sea cucumber Apostichopus japonicus integrated multi-trophic aquaculture (IMTA). Little is known about the main feeding type and food resources of living organisms in this IMTA ecosystem. Neither is the information about other animals competing food with A. japonicus. Functional group (FG) and their food resources of mobile organisms and epifauna in ARs area were investigated. There were three types of food resources and five FGs within two trophic levels in studied area. Particle organic matter (POM), seaweed detritus and sediment were considered to be the main food resources. The first three FGs were primary consumers and were mainly epifauna, while the other two FGs were secondary consumers. FG 1 species were filter feeders, and group 2 was all deposit feeders and A. japonicus was in this group. FG 2 contained few species and this indicated that A. japonicus had few food competitors. FG 3 contained most epifauna species which were detritus feeders and this result implied that the artificial oyster shell reed can retain detritus effectively. The food sources of group 4 were complex. Species of group 5, mostly fish, occupied the top trophic level and fed primarily on species of FG 1 and FG 2. This kind of ARs can retain detritus effectively and provide suitable habitat to epifauna and surrounding natural fauna community.

  15. Growth, mortality and susceptibility of oyster Crassostrea spp. to Perkinsus spp. infection during on growing in northeast Brazil

    Marcos Paiva Scardua

    2017-11-01

    Full Text Available Abstract Crassostrea rhizophorae and C. gasar oysters are cultivated in the northeast region. Perkinsus parasites infect bivalves, and their effects on oysters from tropical regions are poorly understood. This study evaluated the impact of Perkinsus infection on the productive traits of native oysters. Oysters were sampled bimonthly during 7 months, from July 2010 to February 2011, to evaluate growth rate, mortality and shell color patterns (white and dark-gray (n = 500, and to determine the prevalence and intensity of Perkinsus (n = 152. Perkinsus and Crassostrea species were determined using molecular tools. Results showed that most dark-gray (90%, n = 20 and white (67%, n = 18 oysters were C. gasar and C. rhizophorae, respectively. Oysters showed a high growth rate and moderate cumulative mortality (44%. C. gasar oysters grew better and showed lower mortality and lower incidence of Perkinsus compared to C. rhizophorae. The mean prevalence of Perkinsus was moderate (48%, but the infection intensity was light (2.2. Perkinsosis affected very small oysters (19.4 mm. In conclusion, native oysters, especially C. gasar, have a great potential for culture, mortality is not associated with perkinsosis, and the shell color of oysters can be used to improve selection for spats with better performance.

  16. Effect of linear alkylbenzene mixtures and sanitary sewage in biochemical and molecular responses in pacific oyster Crassostrea gigas.

    Flores-Nunes, Fabrício; Mattos, Jacó J; Zacchi, Flávia L; Serrano, Miguel A S; Piazza, Clei E; Sasaki, Silvio T; Taniguchi, Satie; Bicego, Márcia C; Melo, Cláudio M R; Bainy, Afonso C D

    2015-11-01

    Urban effluents are rich in nutrients, organic matter, pharmaceuticals and personal care products (PPCPs), pesticides, hydrocarbons, surfactants, and others. Previous studies have shown that oysters Crassostrea gigas accumulate significant levels of linear alkylbenzenes (LABs) in sanitary sewage contaminated sites, but there is little information about its toxicological effects in marine bivalves. The aim of this study was to analyze the transcription of genes in two tissues of C. gigas exposed for 12, 24, and 36 h to LABs or sanitary sewage. Likewise, the activity of antioxidant and biotransformation enzymes was measured in oysters exposed for 36 h in all groups. Oysters exposed to LABs and oysters exposed to sanitary sewage showed different patterns of transcriptional responses. LAB-exposed oysters showed lower level of biological responses than the oysters exposed to sanitary sewage. Despite the ability of the oyster C. gigas to accumulate LABs (28-fold), the data indicate that these contaminants are not the cause for the transcriptional responses observed in oysters exposed to sanitary sewage. Possibly, the biological changes observed in the sanitary sewage-exposed oysters are associated with the presence of other contaminants, which might have caused synergistic, additive, or antagonistic effects. The results show that FABP-like and GST-ω-like messenger RNAs (mRNAs) have a rapid response in tissues of oyster C. gigas exposed to sanitary sewage, suggesting a possible protective response and a role in maintaining homeostasis of these organisms.

  17. Global Ecosystem Restoration Index

    Fernandez, Miguel; Garcia, Monica; Fernandez, Nestor

    2015-01-01

    The Global ecosystem restoration index (GERI) is a composite index that integrates structural and functional aspects of the ecosystem restoration process. These elements are evaluated through a window that looks into a baseline for degraded ecosystems with the objective to assess restoration...

  18. Linking restoration ecology with coastal dune restoration

    Lithgow, D.; Martínez, M. L.; Gallego-Fernández, J. B.; Hesp, P. A.; Flores, P.; Gachuz, S.; Rodríguez-Revelo, N.; Jiménez-Orocio, O.; Mendoza-González, G.; Álvarez-Molina, L. L.

    2013-10-01

    Restoration and preservation of coastal dunes is urgently needed because of the increasingly rapid loss and degradation of these ecosystems because of many human activities. These activities alter natural processes and coastal dynamics, eliminate topographic variability, fragment, degrade or eliminate habitats, reduce diversity and threaten endemic species. The actions of coastal dune restoration that are already taking place span contrasting activities that range from revegetating and stabilizing the mobile substrate, to removing plant cover and increasing substrate mobility. Our goal was to review how the relative progress of the actions of coastal dune restoration has been assessed, according to the ecosystem attributes outlined by the Society of Ecological Restoration: namely, integrity, health and sustainability and that are derived from the ecological theory of succession. We reviewed the peer reviewed literature published since 1988 that is listed in the ISI Web of Science journals as well as additional references, such as key books. We exclusively focused on large coastal dune systems (such as transgressive and parabolic dunefields) located on natural or seminatural coasts. We found 150 articles that included "coastal dune", "restoration" and "revegetation" in areas such as title, keywords and abstract. From these, 67 dealt specifically with coastal dune restoration. Most of the studies were performed in the USA, The Netherlands and South Africa, during the last two decades. Restoration success has been assessed directly and indirectly by measuring one or a few ecosystem variables. Some ecosystem attributes have been monitored more frequently (ecosystem integrity) than others (ecosystem health and sustainability). Finally, it is important to consider that ecological succession is a desirable approach in restoration actions. Natural dynamics and disturbances should be considered as part of the restored system, to improve ecosystem integrity, health and

  19. MANGROVE-DERIVED NUTRIENTS AND CORAL REEFS

    Understanding the consequences of the declining global cover of mangroves due to anthropogenic disturbance necessitates consideration of how mangrove-derived nutrients contribute to threatened coral reef systems. We sampled potential sources of organic matter and a suite of sessi...

  20. EPA Field Manual for Coral Reef Assessments

    The Water Quality Research Program (WQRP) supports development of coral reef biological criteria. Research is focused on developing methods and tools to support implementation of legally defensible biological standards for maintaining biological integrity, which is protected by ...

  1. Reef Fish of Navassa Island 2004

    National Oceanic and Atmospheric Administration, Department of Commerce — This record refers to reef fish data collected on the 2004 cruise to Navassa Island National Wildlife Refuge. The random point count method (Bohnsack-Bannerot 1986)...

  2. Ecosystem function and biodiversity on coral reefs

    Ogden, J.; Done, T.; Salvat, B.

    1994-01-01

    The article highlights a workshop held in Key West, Florida in November 1993 attended by a group of 35 international scientists where topics of ecosystem function and biodiversity on coral reefs were discussed.

  3. CRED REA Algal Assessments, Kingman Reef 2006

    National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 15 sites at Kingman Reef in the US...

  4. Coral Reef Watch, Hotspots, 50 km

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch provides Coral Bleaching hotspot maps derived from NOAA's Polar Operational Environmental Satellites (POES). This data provides global area...

  5. Florida Reef Fish Visual Census 1999 - Present

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set of Excel files contain data from visual sampling of coral reef fish species in the National Marine Sanctuary along the Florida Keys. The dataset...

  6. Extinction vulnerability of coral reef fishes.

    Graham, Nicholas A J; Chabanet, Pascale; Evans, Richard D; Jennings, Simon; Letourneur, Yves; Aaron Macneil, M; McClanahan, Tim R; Ohman, Marcus C; Polunin, Nicholas V C; Wilson, Shaun K

    2011-04-01

    With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate. © 2011 Blackwell Publishing Ltd/CNRS.

  7. Microbial stowaways: Addressing oil spill impacts and the artificial reef effect on deep-sea microbiomes

    Hamdan, L. J.; Salerno, J. L.; Blackwell, C. A.; Little, B.; McGown, C.; Fitzgerald, L. A.; Damour, M.

    2016-02-01

    Shipwrecks enhance macro-biological diversity in the deep ocean, but, to date, studies have not explored the reef effect on deep-sea microbiological diversity. This is an important concept to address in a restoration framework, as microbial biogeochemical function impacts recruitment and adhesion of higher trophic levels on artificial reefs. In addition, microbial biofilms influence the preservation of shipwrecks through biologically mediated corrosion. Oil and gas-related activities have potential to disrupt the base of the reef trophic web; therefore, bacterial diversity and gene function at six shipwrecks (3 steel-hulled; 3 wood-hulled) in the northern Gulf of Mexico was investigated as part of the GOM-SCHEMA (Shipwreck Corrosion, Hydrocarbon Exposure, Microbiology, and Archaeology) project. Sites were selected based on proximity to the Deepwater Horizon spill's subsurface plume, depth, hull type, and existing archaeological data. Classification of taxa in sediments adjacent to and at distance from wrecks, in water, and on experimental steel coupons was used to evaluate how the presence of shipwrecks and spill contaminants in the deep biosphere influenced diversity. At all sites, and in all sample types, Proteobacteria were most abundant. Biodiversity was highest in surface sediments and in coupon biofilms adjacent to two steel-hulled wrecks in the study (Halo and Anona) and decreased with sediment depth and distance from the wrecks. Sequences associated with the iron oxidizing Mariprofundus genus were elevated at steel-hulled sites, indicating wreck-specific environmental selection. Despite evidence of the reef effect on microbiomes, bacterial composition was structured primarily by proximity to the spill and secondarily by hull material at all sites. This study provides the first evidence of an artificial reef effect on deep-sea microbial communities and suggests that biodiversity and function of primary colonizers of shipwrecks may be impacted by the spill.

  8. Local Biomass Baselines and the Recovery Potential for Hawaiian Coral Reef Fish Communities

    Kelvin D. Gorospe

    2018-05-01

    Full Text Available Understanding the influence of multiple ecosystem drivers, both natural and anthropogenic, and how they vary across space is critical to the spatial management of coral reef fisheries. In Hawaii, as elsewhere, there is uncertainty with regards to how areas should be selected for protection, and management efforts prioritized. One strategy is to prioritize efforts based on an area's biomass baseline, or natural capacity to support reef fish populations. Another strategy is to prioritize areas based on their recovery potential, or in other words, the potential increase in fish biomass from present-day state, should management be effective at restoring assemblages to something more like their baseline state. We used data from 717 fisheries-independent reef fish monitoring surveys from 2012 to 2015 around the main Hawaiian Islands as well as site-level data on benthic habitat, oceanographic conditions, and human population density, to develop a hierarchical, linear Bayesian model that explains spatial variation in: (1 herbivorous and (2 total reef fish biomass. We found that while human population density negatively affected fish assemblages at all surveyed areas, there was considerable variation in the natural capacity of different areas to support reef fish biomass. For example, some areas were predicted to have the capacity to support ten times as much herbivorous fish biomass as other areas. Overall, the model found human population density to have negatively impacted fish biomass throughout Hawaii, however the magnitude and uncertainty of these impacts varied locally. Results provide part of the basis for marine spatial planning and/or MPA-network design within Hawaii.

  9. Artificial reef evaluation capabilities of Florida counties

    Halusky, Joseph G.; Antonini, Gustavo A.; Seaman, William

    1993-01-01

    Florida's coastal county artificial reef sampling and data management programs are surveyed in this report. The survey describes the county level capability for artificial reef documentation and performance assessment based on their needs, interests, organizational structure and "in-situ" data collection and data management techniques. The. primary purpose of this study is to describe what staffing, training, techniques, organizational procedures and equipment are used by the c...

  10. Characteristic crystal orientation of folia in oyster shell, Crassostrea gigas

    Lee, Seung Woo [Department of Chemical and Biomolecular Engineering, Sogang University, Seoul (Korea, Republic of); Kim, Gyeung Ho [Nano-Materials Reserch Center, Korea Institute of Science and Technology, Seoul (Korea, Republic of); Choi, Cheong Song [Department of Chemical and Biomolecular Engineering, Sogang University, Seoul (Korea, Republic of)], E-mail: cschoi@sogang.ac.kr

    2008-03-10

    The thin sheets of calcite, termed folia, that make up much of the shell of an oyster are composed of foliated lath. Folia of the giant Pacific oyster (Crassostrea gigas) were examined using TEM (transmission electron microscopy) and tested using microindentation and nanoindentation techniques. Analysis of the Kikuchi patterns obtained from the folia showed that there are two types (type I and type II) of preferred orientation, with an angle of around 70{sup o} between them. Nanoindentation tests showed that the folia exhibit a hardness of about 3 GPa and elastic modulus of about 73 GPa. Microcracks were generated using a microindenter in order to study the fracture mechanisms of the folia. Following on from these investigations, fracture mechanisms are discussed in conjunction with the correlation between preferred orientation and structural characteristics during cracking of the folia. Comparing the morphology and the polymorphism with nacre (also known as mother of pearl), the advantages of the relatively fast crystal growth and less amount of organic matrix in folia may have interesting implications for the development of sophisticated synthetic materials.

  11. Utilization following of bioremediation attributes using oyster mushrooms - Pleurotus ostreatus

    Galanda, D.; Matel, L.

    2007-01-01

    The mushrooms are not only rich food products, but also a specific component of forest biogeocenoses playing an important role in their functioning, including radionuclide migration. The reason why fungi work as such good indicators for radioactivity and pollution in general is connected to their structure. Using absorption to obtain their nutrition, fungi lack water-conducting organs like stems and roots. They absorb moisture and nutrients from the soil background through surface cells. Dissolved or airborne materials, which include pollutants, move freely through the compartments of hyphae. What is more, radiation released during nuclear testing or accidents is absorbed, especially in areas where it rained heavily shortly after the incident. The present work is devoted to an estimation of the transfer coefficient between reared oyster mushrooms and their support die, which was injected with known activity of 241 Am and 242 Pu. After 2 months when we get the reared mushrooms of cane oyster mushrooms were dried and prepared by liquid extraction with Aliquat 336. The samples were measured by alpha-spectrometry. The results of activity 241 Am and 242 Pu in the mushrooms body and residual activity in the support was detected and calculated (authors)

  12. Macroalgae in the coral reefs of Eilat (Gulf of Aqaba, Red Sea) as a possible indicator of reef degradation

    Bahartan, Karnit; Zibdah, Mohammad; Ahmed, Yousef; Israel, Alvaro; Brickner, Itzchak; Abelson, Avigdor

    2010-01-01

    The current state of health of the coral reefs in the northern Gulf of Aqaba (Red Sea), notably the Eilat reefs, is under debate regarding both their exact condition and the causes of degradation. A dearth of earlier data and unequivocal reliable indices are the major problems hinder a clear understanding of the reef state. Our research objective was to examine coral-algal dynamics as a potential cause and an indication of reef degradation. The community structure of stony corals and algae along the northern Gulf of Aqaba reveal non-seasonal turf algae dominancy in the shallow Eilat reefs (up to 72%), while the proximate Aqaba reefs present negligible turf cover (<6%). We believe that turf dominancy can indicate degradation in these reefs, based on the reduction in essential reef components followed by proliferation of perennial turf algae. Our findings provide further evidence for the severe state of the Eilat coral reefs.

  13. Impacts of Artificial Reefs on Surrounding Ecosystems

    Manoukian, Sarine

    Artificial reefs are becoming a popular biological and management component in shallow water environments characterized by soft seabed, representing both important marine habitats and tools to manage coastal fisheries and resources. An artificial reef in the marine environment acts as an open system with exchange of material and energy, altering the physical and biological characteristics of the surrounding area. Reef stability will depend on the balance of scour, settlement, and burial resulting from ocean conditions over time. Because of the unstable nature of sediments, they require a detailed and systematic investigation. Acoustic systems like high-frequency multibeam sonar are efficient tools in monitoring the environmental evolution around artificial reefs, whereas water turbidity can limit visual dive and ROV inspections. A high-frequency multibeam echo sounder offers the potential of detecting fine-scale distribution of reef units, providing an unprecedented level of resolution, coverage, and spatial definition. How do artificial reefs change over time in relation to the coastal processes? How accurately does multibeam technology map different typologies of artificial modules of known size and shape? How do artificial reefs affect fish school behavior? What are the limitations of multibeam technology for investigating fish school distribution as well as spatial and temporal changes? This study addresses the above questions and presents results of a new approach for artificial reef seafloor mapping over time, based upon an integrated analysis of multibeam swath bathymetry data and geoscientific information (backscatter data analysis, SCUBA observations, physical oceanographic data, and previous findings on the geology and sedimentation processes, integrated with unpublished data) from Senigallia artificial reef, northwestern Adriatic Sea (Italy) and St. Petersburg Beach Reef, west-central Florida continental shelf. A new approach for observation of fish

  14. Coral reefs and the World Bank.

    Hatziolos, M

    1997-01-01

    The World Bank¿s involvement in coral reef conservation is part of a larger effort to promote the sound management of coastal and marine resources. This involves three major thrusts: partnerships, investments, networks and knowledge. As an initial partner and early supporter of the International Coral Reef Initiative (ICRI), the Bank serves as the executive planning committee of ICRI. In partnership with the World Conservation Union and the Great Barrier Reef Marine Park Authority, the Bank promotes the efforts towards the establishment and maintenance of a globally representative system of marine protected areas. In addition, the Bank invested over $120 million in coral reef rehabilitation and protection programs in several countries. Furthermore, the Bank developed a ¿Knowledge Bank¿ that would market ideas and knowledge to its clients along with investment projects. This aimed to put the best global knowledge on environmentally sustainable development in the hands of its staff and clients. During the celebration of 1997, as the International Year of the Reef, the Bank planned to cosponsor an associated event that would highlight the significance of coral reefs and encourage immediate action to halt their degradation to conserve this unique ecosystem.

  15. Restoration of coral populations in light of genetic diversity estimates

    Shearer, T. L.; Porto, I.; Zubillaga, A. L.

    2009-09-01

    Due to the importance of preserving the genetic integrity of populations, strategies to restore damaged coral reefs should attempt to retain the allelic diversity of the disturbed population; however, genetic diversity estimates are not available for most coral populations. To provide a generalized estimate of genetic diversity (in terms of allelic richness) of scleractinian coral populations, the literature was surveyed for studies describing the genetic structure of coral populations using microsatellites. The mean number of alleles per locus across 72 surveyed scleractinian coral populations was 8.27 (±0.75 SE). In addition, population genetic datasets from four species ( Acropora palmata, Montastraea cavernosa, Montastraea faveolata and Pocillopora damicornis) were analyzed to assess the minimum number of donor colonies required to retain specific proportions of the genetic diversity of the population. Rarefaction analysis of the population genetic datasets indicated that using 10 donor colonies randomly sampled from the original population would retain >50% of the allelic diversity, while 35 colonies would retain >90% of the original diversity. In general, scleractinian coral populations are genetically diverse and restoration methods utilizing few clonal genotypes to re-populate a reef will diminish the genetic integrity of the population. Coral restoration strategies using 10-35 randomly selected local donor colonies will retain at least 50-90% of the genetic diversity of the original population.

  16. Length-weight relationships of coral reef fishes from the Alacran Reef, Yucatan, Mexico

    Gonzalez-Gandara, C.; Perez-Diaz, E.; Santos-Rodriguez, L.; Arias-Gonzalez, J.E.

    2003-01-01

    Length-weight relationships were computed for 42 species of coral reef fishes from 14 families from the Alacran Reef (Yucatan, Mexico). A total of 1 892 individuals was used for this purpose. The fish species were caught by different fishing techniques such as fishhooks, harpoons, gill and trawl nets. The sampling period was from March 1998 to January 2000.

  17. Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae

    Barott, K.L.; Rodriguez-Mueller, B; Youle, M.; Marhaver, K.L.; Vermeij, M.J.A.; Smith, J.E.; Rohwer, F.L.

    2012-01-01

    Competition between reef-building corals and benthic algae is of key importance for reef dynamics. These interactions occur on many spatial scales, ranging from chemical to regional. Using microprobes, 16S rDNA pyrosequencing and underwater surveys, we examined the interactions between the

  18. Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

    Rafael A. Magris

    2018-04-01

    Full Text Available Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal development, mining, aquaculture, shipping, and global warming. We calculated an index of the risk to cumulative impacts: (i assuming uniform sensitivity of coral reefs to stressors; and (ii using impact weights to reflect varying tolerance levels of coral reefs to each stressor. We also predicted the index in both the presence and absence of global warming. We found that 16% and 37% of coral reefs had high to very high risk of cumulative impacts, without and with information on sensitivity respectively, and 42% of reefs had low risk to cumulative impacts from both local and global stressors. Our outputs are the first comprehensive spatial dataset of cumulative impact on coral reefs in Brazil, and show that areas requiring attention mostly corresponded to those closer to population centres. We demonstrate how the relationships between risks from local and global stressors can be used to derive strategic management actions.

  19. Coral mortality in reefs: The cause and effect; A central concern for reef monitoring

    Raghukumar, C.

    stream_size 4 stream_content_type text/plain stream_name Region_Workshop_Conserv_Sustain_Mgmt_Coral_Reefs_1997_C83.pdf.txt stream_source_info Region_Workshop_Conserv_Sustain_Mgmt_Coral_Reefs_1997_C83.pdf.txt Content-Encoding ISO-8859...

  20. Year-round screening of noncommercial and commercial oysters for the presence of human pathogenic viruses

    Lodder-Verschoor, F.; Husman, A.M.R.; Berg, van den H.H.J.L.; Stein, A.; Pelt-Heerschap, van H.M.L.; Poel, van der W.H.M.

    2005-01-01

    Consumption of virus-contaminated shellfish has caused numerous outbreaks of gastroenteritis and hepatitis worldwide. In The Netherlands, oysters are cultured and imported both for consumption and export; therefore, the presence of noroviruses, rotaviruses, astroviruses, hepatitis A viruses, and

  1. Evaluation of waste concrete road materials for use in oyster aquaculture.

    2013-02-01

    The primary objective of this study was to determine the suitability of recycled concrete : aggregate (RCA) from road projects as bottom conditioning material for on-bottom oyster : aquaculture in the Chesapeake Bay. The testing was designed to (1) e...

  2. Phase II evaluation of waste concrete road materials for use in oyster aquaculture - field test.

    2015-02-01

    The overall objective of this study was to determine the suitability of recycled concrete aggregate : (RCA) from road projects as bottom conditioning material for on-bottom oyster aquaculture in the : Chesapeake Bay. During this Phase of the study, t...

  3. Use of extracts from oyster shell and soil for cultivation of Spirulina maxima.

    Jung, Joo-Young; Kim, Sunmin; Lee, Hansol; Kim, Kyochan; Kim, Woong; Park, Min S; Kwon, Jong-Hee; Yang, Ji-Won

    2014-12-01

    Calcium ion and trace metals play important roles in various metabolisms of photosynthetic organisms. In this study, simple methods were developed to extract calcium ion and micronutrients from oyster shell and common soil, and the prepared extracts were tested as a replacement of the corresponding chemicals that are essential for growth of microalgae. The oyster shell and soil were treated with 0.1 M sodium hydroxide or with 10 % hydrogen peroxide, respectively. The potential application of these natural sources to cultivation was investigated with Spirulina maxima. When compared to standard Zarrouk medium, the Spirulina maxima cultivated in a modified Zarrouk media with elements from oyster shell and soil extract exhibited increases in biomass, chlorophyll, and phycocyanin by 17, 16, and 64 %, respectively. These results indicate that the extracts of oyster shell and soil provide sufficient amounts of calcium and trace metals for successful cultivation of Spirulina maxima.

  4. Network analysis of oyster transcriptome revealed a cascade of cellular responses during recovery after heat shock.

    Lingling Zhang

    Full Text Available Oysters, as a major group of marine bivalves, can tolerate a wide range of natural and anthropogenic stressors including heat stress. Recent studies have shown that oysters pretreated with heat shock can result in induced heat tolerance. A systematic study of cellular recovery from heat shock may provide insights into the mechanism of acquired thermal tolerance. In this study, we performed the first network analysis of oyster transcriptome by reanalyzing microarray data from a previous study. Network analysis revealed a cascade of cellular responses during oyster recovery after heat shock and identified responsive gene modules and key genes. Our study demonstrates the power of network analysis in a non-model organism with poor gene annotations, which can lead to new discoveries that go beyond the focus on individual genes.

  5. IN VITRO KILLING OF PERKINSUS MARINUS BY HEMOCYTES OF OYSTERS CRASSOSTREA VIRGINICA

    A colorimetric microbicidal assay was adapted, optimized and applied in experiments to characterize the in vitro capacity of eastern oyster (Crassostrea virginica) hemocytes to kill cultured isolates of Perkinsus marinus, a protozoan parasite causing a highly destructive disease...

  6. EFFECTS OF FRESHWATER RELEASES AND SEASON ON OYSTERS (CRASSOSTREA VIRGINICA) IN CALOOSAHATCHEE ESTUARY, FLORIDA

    The influence of freshwater releases and season on disease prevalence and intensity of Perkinsus marinus, condition index, gonadal condition, recruitment potential, and growth of oysters was examined monthly at five locations along the Caloosahatchee estuary, Florida. Temperature...

  7. ESTABLISHING MINIMUM FLOWS AND LEVELS OF FRESHWATER IN THE CALOOSAHATCHEE RIVER, FLORIDA, USING RESPONSES OF OYSTERS.

    Alterations in freshwater inflow resulting from watershed development and water management practices have impacted salinity and water quality and led to declines in oyster populations within southwest Florida estuaries. In the Caloosahatchee Estuary, Florida watershed management ...

  8. PARASITIC AND SYMBIONIC FAUNA IN OYSTERS (CRASSOSTREA VIRGINICA) COLLECTED FROM THE CALOOSAHATCHEE RIVER AND ESTUARY, FLORIDA

    Studies of oysters, Crassostrea virginica, collected from ten sites in the Caloosahatchee River and Estuary, Florida, revealed a varied parasite and symbiotic fauna that have never been reported from this area. Organisms observed included ovacystis virus infecting gametes...

  9. CREEK Project's Oyster Biomass Database for Eight Creeks in the North Inlet Estuary, South Carolina

    Baruch Institute for Marine and Coastal Sciences, Univ of South Carolina — A group of eight tidal creeks dominated by oysters, Crassostrea virginica, in North Inlet Estuary, South Carolina, USA were studied using a replicated BACI (Before -...

  10. Phase II evaluation of waste concrete road materials for use in oyster aquaculture - field test.

    2014-11-01

    The overall objective of this study was to determine the suitability of recycled concrete : aggregate (RCA) from road projects as bottom conditioning material for on-bottom oyster : aquaculture in the Chesapeake Bay. During this Phase of the study, t...

  11. SEASONAL VARIATION IN LYSOSOMAL DESTABILIZATION IN OYSTERS, CRASSOSTREA VIRGINICA. (R826201)

    Lysosomal destabilization assays have been used as valuable biomarkers of pollutant exposures in a variety of bivalve and fish species. The responses of oysters, Crassostrea virginica, deployed at and native to various reference and degraded sites were evaluated for lys...

  12. Physicochemical and sensorial characteristics of noodle enriched with oyster mushroom (Pleorotus ostreatus) powder

    Wahyono, A.; Novianti; Bakri, A.; Kasutjianingati

    2018-01-01

    Oyster Mushroom is a mushroom that can be used for food and medicine. It contains highly nutritious and functional substances such as statins and beta-glucan. A comprehensive evaluation of noodle-enriched with Oyster Mushroom powder has not been performed so far. In this study, we performed a comprehensive evaluation of noodle-enriched with Oyster Mushroom powder. The aim of this study was to assess the effects of enrichment of Oyster Mushroom Powder (OMP) on the quality of noodle. The quality of noodle was evaluated based on physical, chemical and sensorial characteristics. This study was done by substituting wheat flour with OMP at the level of 0 (control); 5; 7.5; 10; 12.5; and 15%. The results showed that OMP significantly affected (Pvalues of noodle.

  13. INFLUENCE OF SEASONAL FACTORS ON OYSTER HEMOCYTE KILLING OF VIBRIO PARAHEMOLYTICUS

    Seasonal variation of cellular defenses of oyster Crassostrea virginica against Vibrio parahaemolyticus were examined from June 1997 to December 1998 using a recently developed bactericidal assay that utilizes a tetrazolium dye. Mean hemocyte numbers, plasma lysozyme, and P. mari...

  14. THE EFFECT OF PCBS ON GLYCOGEN RESERVES IN THE EASTERN OYSTER CRASSOSTREA VIRGINICA. (R825349)

    Recent declines in Chesapeake Bay oyster populations have been attributed to disease, and reduced water quality from pollution. The stress associated with pollutant exposure may reduce energy available for growth and reproduction. Polychlorinated biphenyls (PCBs) are lipophilic c...

  15. Differential response of oyster shell powder on enzyme profile and nutritional value of oyster mushroom Pleurotus florida PF05.

    Naraian, Ram; Narayan, Om Prakash; Srivastava, Jatin

    2014-01-01

    Oyster mushroom Pleurotus florida was cultivated on different combinations of wheat straw (WS) as basal substrate and oyster shell powder (OSP) supplement. The OSP supplementation considerably responded to different cultivation phases. The mycelium grew fast and showed rapid growth rate (8.91 mmd(-1)) in WS + OSP (97 + 3) combination while WS + OSP (92 + 8) showed maximum laccase (3.133 U/g) and Mn peroxidase (MnP) activities (0.091 U/g). The climax level of laccase (5.433 U/g) and MnP (0.097 U/g) was recorded during fruit body initiation in WS + OSP (97 + 3) and WS + OSP (98 + 2) combinations, respectively. The WS + OSP (97 + 3) combination represented the best condition for mushroom cultivation and produced the highest biological efficiency (147%). In addition, protein and lipid contents in fruit bodies were slightly improved in response to OSP. The carbohydrate was significantly increased by raising concentration of OSP. The highest values of protein, carbohydrate, and lipid noted were 31.3 μg/g, 0.0639 (g/g), and 0.373 (g/g) correspondingly. Conclusively it was evident that lower concentrations of OSP acted positively and relatively to higher concentrations and improved nutritional content which may suitably be used to enhance both yield and nutritional values of mushroom.

  16. Pathogenic bacteria associated with oysters (Crassostrea brasiliana) and estuarine water along the south coast of Brazil.

    Ristori, Christiane A; Iaria, Sebastião T; Gelli, Dilma S; Rivera, Irma N G

    2007-08-01

    Oysters and estuarine water samples were collected monthly, from June 1998 to March 1999, in the Cananéia estuary, on the south coast of São Paulo, Brazil, and analyzed for bacterial hazards with and without depuration in filtered estuarine water. Aeromonas spp., Plesiomonas shigelloides, Vibrio cholerae O1, Vibrio parahaemolyticus, and Vibrio vulnificus were counted in oyster samples using the most probable number (MPN) and their presence verified in the surrounding estuarine water samples. The presence of Salmonella, Shigella, Escherichia coli O157:H7, and fecal coliforms counts were determined in oysters and in water samples too. Sixty percent of water samples contained fecal coliforms ranging from 200 CFU/100 ml and 100%, 30%, 20% and 10% were positive for V. parahaemolyticus, Salmonella, Aeromonas, and V. vulnificus in 5 l of water samples, respectively. In oyster samples, the fecal coliforms concentration ranged from or =2.4 x 10(3) MPN/g in 40% of untreated and from oyster samples and their concentration varied from 3.6 to > or =2.4 x 10(3) MPN/g. For the untreated oyster samples 80%, 70%, and 10% were positive for V. vulnificus (oyster samples 60%, 30%, and 0% of them contained the same bacteria, respectively. Escherichia coli O157:H7, Shigella spp., P. shigelloides, and V. cholerae O1 were not detected in any of the samples. Fecal indicators did not correlate with Vibrio presence (p>0.05), although the isolation of Aeromonas species had a positive correlation (p = 0.017). The results showed no correlation between temperature, salinity, and bacteria (p > 0.05). The comparison between bacterial concentration in treated and untreated oyster samples, showed that only Aeromonas was higher in untreated oyster samples (p = 0.039). This study contributes toward creating a more global understanding of food-borne bacterial pathogens. The presence and concentration of viable bacterial hazards in oysters and water surrounding areas was determined for the first time

  17. Soundscapes from a Tropical Eastern Pacific reef and a Caribbean Sea reef

    Staaterman, E.; Rice, A. N.; Mann, D. A.; Paris, C. B.

    2013-06-01

    Underwater soundscapes vary due to the abiotic and biological components of the habitat. We quantitatively characterized the acoustic environments of two coral reef habitats, one in the Tropical Eastern Pacific (Panama) and one in the Caribbean (Florida Keys), over 2-day recording durations in July 2011. We examined the frequency distribution, temporal variability, and biological patterns of sound production and found clear differences. The Pacific reef exhibited clear biological patterns and high temporal variability, such as the onset of snapping shrimp noise at night, as well as a 400-Hz daytime band likely produced by damselfish. In contrast, the Caribbean reef had high sound levels in the lowest frequencies, but lacked clear temporal patterns. We suggest that acoustic measures are an important element to include in reef monitoring programs, as the acoustic environment plays an important role in the ecology of reef organisms at multiple life-history stages.

  18. Using oysters as anthropogenic indicators to evaluate the occurrence of the wastewater contamination of the estuaries

    Ding, Wang-Hsien

    2015-04-01

    The oyster (Crossostrea gigas) is an important aquacultural species in Taiwan. With an area of over 85% of the total inshore aquacultural field, its production, measured by quantity or economic value, ranks above all other aquacultural products in Taiwan. Since oyster's habitat is on shelves near the coast, the samples from a particular "oyster cultural site" can be applied to evaluate the pollution of a segment of the coastal water. Deficient wastewater treatment has caused untreated wastewaters to have flown in rivers into oyster cultural areas in estuaries as well as shallow coastal water. Therefore, the concentration of pollutants in the oysters can be used as anthropogenic indicators to evaluate the occurrence of the for wastewater contamination of the coastal water. In this study, two groups of anthropogenic organic compounds, chlorinated flame retardant (i.e., Dechlorane Plus) and benzophenone-type UV absorbing substances (i.e., 2-hydroxy-4-methoxybenzophenone), were determined in oyster samples as wastewater contamination pollutants. The method involves the use of matrix solid-phase dispersion prior to their determination by gas chromatography mass spectrometry. The results show that these two groups of compounds are ubiquitous in oysters with the concentrations of chlorinated flame retardant and benzophenone-type UV absorbing substances ranging from 0.3 to 3.6 ng/g and from 120 to 910 ng/g (lipid weight), respectively. Oysters are useful anthropogenic indicators of organic pollutants in Taiwan's marine environment. The ubiquity of these pollutants in Taiwan's coastal environment supports the need for greater awareness of bioaccumulation processes.

  19. A hemocyte gene expression signature correlated with predictive capacity of oysters to survive Vibrio infections

    Rosa Rafael

    2012-06-01

    Full Text Available Abstract Background The complex balance between environmental and host factors is an important determinant of susceptibility to infection. Disturbances of this equilibrium may result in multifactorial diseases as illustrated by the summer mortality syndrome, a worldwide and complex phenomenon that affects the oysters, Crassostrea gigas. The summer mortality syndrome reveals a physiological intolerance making this oyster species susceptible to diseases. Exploration of genetic basis governing the oyster resistance or susceptibility to infections is thus a major goal for understanding field mortality events. In this context, we used high-throughput genomic approaches to identify genetic traits that may characterize inherent survival capacities in C. gigas. Results Using digital gene expression (DGE, we analyzed the transcriptomes of hemocytes (immunocompetent cells of oysters able or not able to survive infections by Vibrio species shown to be involved in summer mortalities. Hemocytes were nonlethally collected from oysters before Vibrio experimental infection, and two DGE libraries were generated from individuals that survived or did not survive. Exploration of DGE data and microfluidic qPCR analyses at individual level showed an extraordinary polymorphism in gene expressions, but also a set of hemocyte-expressed genes whose basal mRNA levels discriminate oyster capacity to survive infections by the pathogenic V. splendidus LGP32. Finally, we identified a signature of 14 genes that predicted oyster survival capacity. Their expressions are likely driven by distinct transcriptional regulation processes associated or not associated to gene copy number variation (CNV. Conclusions We provide here for the first time in oyster a gene expression survival signature that represents a useful tool for understanding mortality events and for assessing genetic traits of interest for disease resistance selection programs.

  20. Kinds of nucleus for effective pearl cultivation of the pearl oysters, Pinctada fucata

    Kanjanachatree, K.; Piyathamrongrut, K.; Inthoncharoen, J.

    2007-01-01

    Seeding is the most important aspect of pearl cultivation, and appropriate nucleus can determine the quality of a pearl : nacre secretion and accumulation around the nucleus. This affects harvest time, nucleus extrusion, survival rate of the pearl oysters and the production cost. In order to provide nuclei to substitute for those imported from China which are made from freshwater pearl oyster-shells, 3 kinds of the local shells of Pinctada fucata, Pteria penguin and Pinctada maxima were selec...

  1. Preliminary study of transplanting as a process for reducing levels of Vibrio vulnificus and Vibrio parahaemolyticus in shellstock oysters.

    Walton, William C; Nelson, Chris; Hochman, Mona; Schwarz, John

    2013-01-01

    Increasingly strict standards for harvest of oysters for the raw, half-shell market (designated as "white tag") should increase the proportion of oysters not meeting these standards (designated as "green tag"). Transplanting of green tag oysters into highsalinity waters (>20 practical salinity units) was explored as a means of returning Vibrio vulnificus and Vibrio parahaemolyticus levels to levels present on initial harvest. In summer 2011, oysters originally harvested in Louisiana were transplanted on two separate occasions (n = 2) to two sites in Mississippi Sound, AL: Sandy Bay and Dauphin Island. Oysters were tested for V. vulnificus and V. parahaemolyticus densities (by using the U.S. Food and Drug Administration enrichment method) after 2, 7, and 14 days deployed, with baseline samples taken (i) at the time of original harvest and iced, (ii) from oysters refrigerated within 1 h of harvest at oysters not refrigerated during the harvest trip (green tag) but refrigerated after an 8-h trip. White and green tag oysters were sampled ∼24 h on arrival in Bon Secour, AL, put on ice, and shipped for analysis. Among baseline samples, there were no significant differences in V. vulnificus and V. parahaemolyticus densities, although the densities in the green tag oysters tended to be highest. After transplanting, V. vulnificus densities were significantly highest on day 2, with no significant differences among any of the other days within a site. On day 2, Sandy Bay had significantly greater densities of V. vulnificus than the Dauphin Island site, but no other days differed from time zero. For Vibrio parahaemolyticus, densities were greatest on day 2 and lowest at time zero, but this did not differ significantly from abundance on day 14. Average survival was 83.4% (± 3.13 SD), with no differences between sites. These preliminary results indicate that high-salinity transplanting could be an effective method of converting green tag oysters to oysters suitable for

  2. Integrated application of transcriptomics and metabolomics provides insights into glycogen content regulation in the Pacific oyster Crassostrea gigas.

    Li, Busu; Song, Kai; Meng, Jie; Li, Li; Zhang, Guofan

    2017-09-11

    The Pacific oyster Crassostrea gigas is an important marine fishery resource, which contains high levels of glycogen that contributes to the flavor and the quality of the oyster. However, little is known about the molecular and chemical mechanisms underlying glycogen content differences in Pacific oysters. Using a homogeneous cultured Pacific oyster family, we explored these regulatory networks at the level of the metabolome and the transcriptome. Oysters with the highest and lowest natural glycogen content were selected for differential transcriptome and metabolome analysis. We identified 1888 differentially-expressed genes, seventy-five differentially-abundant metabolites, which are part of twenty-seven signaling pathways that were enriched using an integrated analysis of the interaction between the differentially-expressed genes and the differentially-abundant metabolites. Based on these results, we found that a high expression of carnitine O-palmitoyltransferase 2 (CPT2), indicative of increased fatty acid degradation, is associated with a lower glycogen content. Together, a high level of expression of phosphoenolpyruvate carboxykinase (PEPCK), and high levels of glucogenic amino acids likely underlie the increased glycogen production in high-glycogen oysters. In addition, the higher levels of the glycolytic enzymes hexokinase (HK) and pyruvate kinase (PK), as well as of the TCA cycle enzymes malate dehydrogenase (MDH) and pyruvate carboxylase (PYC), imply that there is a concomitant up-regulation of energy metabolism in high-glycogen oysters. High-glycogen oysters also appeared to have an increased ability to cope with stress, since the levels of the antioxidant glutathione peroxidase enzyme 5 (GPX5) gene were also increased. Our results suggest that amino acids and free fatty acids are closely related to glycogen content in oysters. In addition, oysters with a high glycogen content have a greater energy production capacity and a greater ability to cope with

  3. Does reef architectural complexity influence resource availability for a large reef-dwelling invertebrate?

    Lozano-Álvarez, Enrique; Luviano-Aparicio, Nelia; Negrete-Soto, Fernando; Barradas-Ortiz, Cecilia; Aguíñiga-García, Sergio; Morillo-Velarde, Piedad S.; Álvarez-Filip, Lorenzo; Briones-Fourzán, Patricia

    2017-10-01

    In coral reefs, loss of architectural complexity and its associated habitat degradation is expected to affect reef specialists in particular due to changes in resource availability. We explored whether these features could potentially affect populations of a large invertebrate, the spotted spiny lobster Panulirus guttatus, which is an obligate Caribbean coral reef-dweller with a limited home range. We selected two separate large coral reef patches in Puerto Morelos (Mexico) that differed significantly in structural complexity and level of degradation, as assessed via the rugosity index, habitat assessment score, and percent cover of various benthic components. On each reef, we estimated density of P. guttatus and sampled lobsters to analyze their stomach contents, three different condition indices, and stable isotopes (δ15N and δ13C) in muscle. Lobster density did not vary with reef, suggesting that available crevices in the less complex patch still provided adequate refuge to these lobsters. Lobsters consumed many food types, dominated by mollusks and crustaceans, but proportionally more crustaceans (herbivore crabs) in the less complex patch, which had more calcareous macroalgae and algal turf. Lobsters from both reefs had a similar condition (all three indices) and mean δ15N, suggesting a similar quality of diet between reefs related to their opportunistic feeding, but differed in mean δ13C values, reflecting the different carbon sources between reefs and providing indirect evidence of individuals of P. guttatus foraging exclusively over their home reef. Overall, we found no apparent effects of architectural complexity, at least to the degree observed in our less complex patch, on density, condition, or trophic level of P. guttatus.

  4. Reef odor: a wake up call for navigation in reef fish larvae.

    Claire B Paris

    Full Text Available The behavior of reef fish larvae, equipped with a complex toolbox of sensory apparatus, has become a central issue in understanding their transport in the ocean. In this study pelagic reef fish larvae were monitored using an unmanned open-ocean tracking device, the drifting in-situ chamber (DISC, deployed sequentially in oceanic waters and in reef-born odor plumes propagating offshore with the ebb flow. A total of 83 larvae of two taxonomic groups of the families Pomacentridae and Apogonidae were observed in the two water masses around One Tree Island, southern Great Barrier Reef. The study provides the first in-situ evidence that pelagic reef fish larvae discriminate reef odor and respond by changing their swimming speed and direction. It concludes that reef fish larvae smell the presence of coral reefs from several kilometers offshore and this odor is a primary component of their navigational system and activates other directional sensory cues. The two families expressed differences in their response that could be adapted to maintain a position close to the reef. In particular, damselfish larvae embedded in the odor plume detected the location of the reef crest and swam westward and parallel to shore on both sides of the island. This study underlines the critical importance of in situ Lagrangian observations to provide unique information on larval fish behavioral decisions. From an ecological perspective the central role of olfactory signals in marine population connectivity raises concerns about the effects of pollution and acidification of oceans, which can alter chemical cues and olfactory responses.

  5. Rice straw addition as sawdust substitution in oyster mushroom (Pleurotus ostreatus) planted media

    Utami, Christine Pamardining; Susilawati, Puspita Ratna

    2017-08-01

    Oyster mushroom is favorite by the people because of the high nutrients. The oyster mushroom cultivation usually using sawdust. The availability of sawdust become difficult to find. It makes difficulties of mushroom cultivation. Rice straw as an agricultural waste can be used as planted media of oyster mushroom because they contain much nutrition needed to the mushroom growth. The aims of this research were to analysis the influence of rice straw addition in a baglog as planted media and to analysis the concentration of rice straw addition which can substitute sawdust in planted media of oyster mushroom. This research used 4 treatment of sawdust and rice straw ratio K = 75 % : 0 %, P1 = 60 % : 15 %, P2 = 40 % : 35 %, P3 = 15 % : 60 %. The same material composition of all baglog was bran 20%, chalk 5%, and water 70%. The parameters used in this research were wet weight, dry weight, moisture content and number of the mushroom fruit body. Data analysis was used ANOVA test with 1 factorial. The results of this research based on statistical analysis showed that there was no influence of rice straw addition in a planted media on the oyster mushroomgrowth. 15% : 60% was the concentrationof rice straw additionwhich can substitute the sawdust in planted media of oyster mushroom.

  6. Widespread survey finds no evidence of Haplosporidium nelsoni (MSX) in Gulf of Mexico oysters.

    Ford, Susan E; Paterno, Jenny; Scarpa, Emily; Stokes, Nancy A; Kim, Yungkul; Powell, Eric N; Bushek, David

    2011-02-22

    The advent of molecular detection assays has provided a set of very sensitive tools for the detection of pathogens in marine organisms, but it has also raised problems of how to interpret positive signals that are not accompanied by visual confirmation. PCR-positive results have recently been reported for Haplosporidium nelsoni (MSX), a pathogen of the oyster Crassostrea virginica in 31 of 40 oysters from 6 sites in the Gulf of Mexico and the Caribbean Sea. Histological confirmation of the PCR results was not undertaken, and no haplosporidian has been reported from the numerous histological studies and surveys of oysters in the region. To further investigate the possibility that H. nelsoni is present in this region, we sampled 210 oysters from 40 sites around the Gulf of Mexico and Puerto Rico using PCR and 180 of these using tissue-section histology also. None of the oysters showed evidence of H. nelsoni by PCR or of any haplosporidian by histology. We cannot, therefore, confirm that H. nelsoni is present and widespread in the Gulf of Mexico and the Caribbean Sea. Our results do not prove that H. nelsoni is absent from the region, but taken together with results from previous histological surveys, they suggest that for the purposes of controlling oyster importation, the region should continue to be considered free of the parasite.

  7. Comparative and quantitative proteomics reveal the adaptive strategies of oyster larvae to ocean acidification

    Dineshram, R.; Q., Quan; Sharma, Rakesh; Chandramouli, Kondethimmanahalli; Yalamanchili, Hari Krishna; Chu, Ivan; Thiyagarajan, Vengatesen

    2015-01-01

    © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. Decreasing pH due to anthropogenic CO2 inputs, called ocean acidification (OA), can make coastal environments unfavorable for oysters. This is a serious socioeconomical issue for China which supplies >70% of the world's edible oysters. Here, we present an iTRAQ-based protein profiling approach for the detection and quantification of proteome changes under OA in the early life stage of a commercially important oyster, Crassostrea hongkongensis. Availability of complete genome sequence for the pacific oyster (Crassostrea gigas) enabled us to confidently quantify over 1500 proteins in larval oysters. Over 7% of the proteome was altered in response to OA at pHNBS 7.6. Analysis of differentially expressed proteins and their associated functional pathways showed an upregulation of proteins involved in calcification, metabolic processes, and oxidative stress, each of which may be important in physiological adaptation of this species to OA. The downregulation of cytoskeletal and signal transduction proteins, on the other hand, might have impaired cellular dynamics and organelle development under OA. However, there were no significant detrimental effects in developmental processes such as metamorphic success. Implications of the differentially expressed proteins and metabolic pathways in the development of OA resistance in oyster larvae are discussed. The MS proteomics data have been deposited to the ProteomeXchange with identifiers PXD002138 (http://proteomecentral.proteomexchange.org/dataset/PXD002138).

  8. The depuration dynamics of oysters (Crassostrea gigas artificially contaminated with hepatitis A virus and human adenovirus

    Adriana de Abreu Corrêa

    2012-02-01

    Full Text Available Within the country of Brazil, Santa Catarina is a major shellfish producer. Detection of viral contamination is an important step to ensure production quality and consumer safety during this process. In this study, we used a depuration system and ultraviolet (UV disinfection to eliminate viral pathogens from artificially infected oysters and analysed the results. Specifically, the oysters were contaminated with hepatitis A virus (HAV or human adenovirus type 5 (HAdV5. After viral infection, the oysters were placed into a depuration tank and harvested after 48, 72 and 96 h. After sampling, various oyster tissues were dissected and homogenised and the viruses were eluted with alkaline conditions and precipitated with polyethylene glycol. The oyster samples were evaluated by cell culture methods, as well as polymerase chain reaction (PCR and quantitative-PCR. Moreover, at the end of the depuration period, the disinfected seawater was collected and analysed by PCR. The molecular assays showed that the HAdV5 genome was present in all of the depuration time samples, while the HAV genome was undetectable after 72 h of depuration. However, viral viability tests (integrated cell culture-PCR and immunofluorescence assay indicated that both viruses were inactivated with 96 h of seawater recirculation. In conclusion, after 96 h of UV treatment, the depuration system studied in this work purified oysters that were artificially contaminated with HAdV5 and HAV.

  9. Populations, not clones, are the unit of vibrio pathogenesis in naturally infected oysters.

    Lemire, Astrid; Goudenège, David; Versigny, Typhaine; Petton, Bruno; Calteau, Alexandra; Labreuche, Yannick; Le Roux, Frédérique

    2015-07-01

    Disease in oysters has been steadily rising over the past decade, threatening the long-term survival of commercial and natural stocks. Our understanding and management of such diseases are of critical importance as aquaculture is an important aspect of dealing with the approaching worldwide food shortage. Although some bacteria of the Vibrio genus isolated from diseased oysters have been demonstrated to be pathogenic by experimental infection, direct causality has not been established. Little is known about the dynamics of how the bacterial population hosted by oysters changes during disease progression. Combining experimental ecology, a high-throughput infection assay and genome sequencing, we show that the onset of disease in oysters is associated with progressive replacement of diverse benign colonizers by members of a phylogenetically coherent virulent population. Although the virulent population is genetically diverse, all members of that population can cause disease. Comparative genomics across virulent and nonvirulent populations identified candidate virulence factors that were clustered in population-specific genomic regions. Genetic analyses revealed that one gene for a candidate virulent factor, a putative outer membrane protein, is necessary for infection of oysters. Finally, analyses of oyster mortality following experimental infection suggest that disease onset can be facilitated by the presence of nonvirulent strains. This is a new form of polymicrobial disease, in which nonpathogenic strains contribute to increase mortality.

  10. A survey of Australian oysters for the presence of human noroviruses.

    Brake, Felicity; Ross, Tom; Holds, Geoffrey; Kiermeier, Andreas; McLeod, Catherine

    2014-12-01

    Impending international policies for norovirus in oysters and the lack of Australian data suggested there was a need to undertake a national survey of norovirus in oysters. Two geographically distinct oyster-growing areas from each of three Australian states were sampled on 4 occasions during 2010 and 2011. The sites selected were considered by state shellfish authorities to be the most compromised with respect to the potential for human faecal contamination as identified by shoreline surveys. The oysters were tested for norovirus GI, GII and Escherichia coli. Norovirus GII was detected in two of 120 (1.7%) samples and norovirus GI was not detected. One of the norovirus positive samples was cloned and sequenced as GII.3. Five of 120 (4.2%) samples were found to have more than the guidance concentration of 230 E. coli per 100 g of shellfish but these samples did not contain detectable concentrations of norovirus. The apparently low prevalence of norovirus in oysters from Australian growing areas supports epidemiological data that suggests norovirus contamination of Australian oysters is rare. The results from this study emphasise the need for future norovirus control measures for shellfish to be commensurate with the risk associated with the growing area. Copyright © 2014 Elsevier Ltd. All rights reserved.

  11. Predatory blue crabs induce stronger nonconsumptive effects in eastern oysters Crassostrea virginica than scavenging blue crabs

    Avery E. Scherer

    2017-02-01

    Full Text Available By influencing critical prey traits such as foraging or habitat selection, predators can affect entire ecosystems, but the nature of cues that trigger prey reactions to predators are not well understood. Predators may scavenge to supplement their energetic needs and scavenging frequency may vary among individuals within a species due to preferences and prey availability. Yet prey reactions to consumers that are primarily scavengers versus those that are active foragers have not been investigated, even though variation in prey reactions to scavengers or predators might influence cascading nonconsumptive effects in food webs. Oysters Crassostrea virginica react to crab predators by growing stronger shells. We exposed oysters to exudates from crabs fed live oysters or fed aged oyster tissue to simulate scavenging, and to controls without crab cues. Oysters grew stronger shells when exposed to either crab exudate, but their shells were significantly stronger when crabs were fed live oysters. The stronger response to predators than scavengers could be due to inherent differences in diet cues representative of reduced risk in the presence of scavengers or to degradation of conspecific alarm cues in aged treatments, which may mask risk from potential predators subsisting by scavenging.

  12. Optimization and application of spray-drying process on oyster cooking soup byproduct

    Huibin CHEN

    Full Text Available Abstract Oyster drying processes have produced a large amount of cooking soup byproducts. In this study, oyster cooking soup byproduct was concentrated and spray-dried after enzymatic hydrolysis to produce seasoning powder. Response surface methodology (RSM was performed on the basis of single-factor studies to optimize the feeding temperature, hot air temperature, atomization pressure, and total solid content of oyster drying. Results revealed the following optimized parameters of this process: feeding temperature of 60 °C, total solid content of 30%, hot air temperature of 197 °C, and atomization pressure of 92 MPa. Under these conditions, the oyster powder yield was 63.7% ± 0.7% and the moisture content was 4.1% ± 0.1%. Our pilot trial also obtained 63.1% yield and 4.0% moisture content. The enzyme hydrolysis of cooking soup byproduct further enhanced the antioxidant activity of the produced oyster seasoning powder to some extent. Spray drying process optimized by RSM can provide a reference for high-valued applications of oyster cooking soup byproducts.

  13. Comparative and quantitative proteomics reveal the adaptive strategies of oyster larvae to ocean acidification

    Dineshram, R.

    2015-10-28

    © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. Decreasing pH due to anthropogenic CO2 inputs, called ocean acidification (OA), can make coastal environments unfavorable for oysters. This is a serious socioeconomical issue for China which supplies >70% of the world\\'s edible oysters. Here, we present an iTRAQ-based protein profiling approach for the detection and quantification of proteome changes under OA in the early life stage of a commercially important oyster, Crassostrea hongkongensis. Availability of complete genome sequence for the pacific oyster (Crassostrea gigas) enabled us to confidently quantify over 1500 proteins in larval oysters. Over 7% of the proteome was altered in response to OA at pHNBS 7.6. Analysis of differentially expressed proteins and their associated functional pathways showed an upregulation of proteins involved in calcification, metabolic processes, and oxidative stress, each of which may be important in physiological adaptation of this species to OA. The downregulation of cytoskeletal and signal transduction proteins, on the other hand, might have impaired cellular dynamics and organelle development under OA. However, there were no significant detrimental effects in developmental processes such as metamorphic success. Implications of the differentially expressed proteins and metabolic pathways in the development of OA resistance in oyster larvae are discussed. The MS proteomics data have been deposited to the ProteomeXchange with identifiers PXD002138 (http://proteomecentral.proteomexchange.org/dataset/PXD002138).

  14. Quantitative assessment of viable Cryptosporidium parvum load in commercial oysters (Crassostrea virginica) in the Chesapeake Bay.

    Graczyk, Thaddeus K; Lewis, Earl J; Glass, Gregory; Dasilva, Alexandre J; Tamang, Leena; Girouard, Autumn S; Curriero, Frank C

    2007-01-01

    The epidemiological importance of increasing reports worldwide on Cryptosporidium contamination of oysters remains unknown in relation to foodborne cryptosporidiosis. Thirty market-size oysters (Crassostrea virginica), collected from each of 53 commercial harvesting sites in Chesapeake Bay, MD, were quantitatively tested in groups of six for Cryptosporidium sp. oocysts by immunofluorescent antibody (IFA). After IFA analysis, the samples were retrospectively retested for viable Cryptosporidium parvum oocysts by combined fluorescent in situ hybridization (FISH) and IFA. The mean cumulative numbers of Cryptosporidium sp. oocysts in six oysters (overall, 42.1+/-4.1) were significantly higher than in the numbers of viable C. parvum oocysts (overall, 28.0+/-2.9). Of 265 oyster groups, 221 (83.4%) contained viable C. parvum oocysts, and overall, from 10-32% (mean, 23%) of the total viable oocysts were identified in the hemolymph as distinct from gill washings. The amount of viable C. parvum oocysts was not related to oyster size or to the level of fecal coliforms at the sampling site. This study demonstrated that, although oysters are frequently contaminated with oocysts, the levels of viable oocysts may be too low to cause infection in healthy individuals. FISH assay for identification can be retrospectively applied to properly stored samples.

  15. Pesticides and Ostreid Herpesvirus 1 Infection in the Pacific Oyster, Crassostrea gigas.

    Moreau, Pierrick; Faury, Nicole; Burgeot, Thierry; Renault, Tristan

    2015-01-01

    Since 2008, mass mortality outbreaks have been reported in all French regions producing Pacific oysters, and in several Member States of the European Union. These mass mortality events of Pacific oysters are related to OsHV-1 infection. They occur during spring and summer periods leaving suspect the quality of the marine environment and the role of seasonal use of pesticides associated with the arrival of freshwater in oyster rearing areas. Pesticides have been also detected in French coastal waters, especially in areas of oyster production. Using PMA real-time PCR we showed that a mixture of 14 pesticides has no effect on the integrity of virus capsids from viral suspension in the conditions tested. A contact of oysters with this pesticide mixture was related to higher mortality rates among experimentally infected animals in comparison with control ones (no previous pesticide exposure before experimental infection). We therefore suggest that pesticides at realistic concentration can exert adverse effects on Pacific oysters and causes an increased susceptibility to the viral infection in experimental conditions.

  16. Detection and distribution of ostreid herpesvirus 1 in experimentally infected Pacific oyster spat.

    Segarra, Amélie; Baillon, Laury; Faury, Nicole; Tourbiez, Delphine; Renault, Tristan

    2016-01-01

    High mortality rates are reported in spat and larvae of Pacific oyster Crassostrea gigas and associated with ostreid herpesvirus 1 (OsHV-1) detection in France. Although the viral infection has been experimentally reproduced in oyster larvae and spat, little knowledge is currently available concerning the viral entry and its distribution in organs and tissues. This study compares OsHV-1 DNA and RNA detection and localization in experimentally infected oysters using two virus doses: a low dose that did not induce any mortality and a high dose inducing high mortality. Real time PCR demonstrated significant differences in terms of viral DNA amounts between the two virus doses. RNA transcripts were detected in oysters receiving the highest dose of viral suspension whereas no transcript was observed in oysters injected with the low dose. This study also allowed observing kinetics of viral DNA and RNA detection in different tissues of oyster spat. Finally, viral detection was significantly different in function of tissues (p<0.005), time (p<0.005) with an interaction between tissues and time (p<0.005) for each probe. Copyright © 2015 Elsevier Inc. All rights reserved.

  17. Ostreid herpesvirus type 1 replication and host response in adult Pacific oysters, Crassostrea gigas.

    Segarra, Amélie; Baillon, Laury; Tourbiez, Delphine; Benabdelmouna, Abdellah; Faury, Nicole; Bourgougnon, Nathalie; Renault, Tristan

    2014-10-08

    Since 2008, massive mortality outbreaks associated with OsHV-1 detection have been reported in Crassostrea gigas spat and juveniles in several countries. Nevertheless, adult oysters do not demonstrate mortality in the field related to OsHV-1 detection and were thus assumed to be more resistant to viral infection. Determining how virus and adult oyster interact is a major goal in understanding why mortality events are not reported among adult Pacific oysters. Dual transcriptomics of virus-host interactions were explored by real-time PCR in adult oysters after a virus injection. Thirty-nine viral genes and five host genes including MyD88, IFI44, IkB2, IAP and Gly were measured at 0.5, 10, 26, 72 and 144 hours post infection (hpi). No viral RNA among the 39 genes was detected at 144 hpi suggesting the adult oysters are able to inhibit viral replication. Moreover, the IAP gene (oyster gene) shows significant up-regulation in infected adults compared to control adults. This result suggests that over-expression of IAP could be a reaction to OsHV-1 infection, which may induce the apoptotic process. Apoptosis could be a main mechanism involved in disease resistance in adults. Antiviral activity of haemolymph against herpes simplex virus (HSV-1) was not significantly different between infected adults versus control.

  18. Refining the tethering of American oysters (Crassostrea virginica) to measure the effects of two environmental stressors.

    Poirier, Luke A; Gilbert, Shane T C; St-Hilaire, Sophie; Davidson, Jeff; Cox, Ruth; Quijón, Pedro A

    2018-02-01

    Tethering assays, or the physical restraint of test organisms, has been used in the past to measure selected organisms' response to stressors while removing the observer from the experimental setting. Although informative for monitoring and hypothesis testing, these assays often used microfilaments that have been found to be too invasive or prone to biases given their effects on test organisms' behavior. Here, we describe a new variation of tethering using American oysters (Crassostrea virginica) and illustrate its use in the study of their mortality rates as a result of two stressors: siltation and predation by a non-indigenous species. Our protocol identified a resistant (non-toxic) glue that could be used to attach oysters to stone slabs, thus partially mimicking the natural cementation of the shell to natural substrates. This variation of tethering was harmless and maintained oysters' body position and natural ability to filter feed. Using tethered oysters in separate two-week field cage experiments, we also show how siltation and predation by a non-indigenous species (the European green crab, Carcinus maenas), caused a gradual, easily measurable increase in oyster mortality rates. We argue that this variation of tethering is a cost-effective and advantageous way to monitor or test the effects of these and other stressors on oysters and similar species. Copyright © 2017 Elsevier Ltd. All rights reserved.

  19. Sediment quality guidelines for copper and zinc for filter-feeding estuarine oysters?

    Birch, G.F.; Hogg, T.D.

    2011-01-01

    Sediment quality guidelines (SQGs) assess the ability of bottom sediment to sustain healthy infauna and water quality guidelines (WQGs) provide protection for a designated percentage of aquatic species. Filter-feeding marine species, e.g. oysters and mussels, acquire food from particles in the water column and protection of these animals is not provided by SQGs or WQGs. The current work investigated the relationship between metal (Cu, Zn) concentrations in total and fine-fraction ( -1 and -1 , respectively) for protecting oysters from exceeding human consumption levels (70 μg g -1 and 1000 μg g -1 , respectively). - A strong correlation between oyster tissue Cu and Zn concentrations and fine-fraction surficial sediment digested in 1 M HCl provided a sedimentary guideline which predicted tissue metal concentrations in oysters and established a level for protecting oysters from exceeding human consumption levels for these metals. The guidelines for fine surficial sediment developed in the present work accurately predicted oyster tissue concentrations in the field.

  20. Spatial and tidal variation in food supply to shallow cold-water coral reefs of the Mingulay Reef complex (Outer Hebrides, Scotland)

    Duineveld, G.C.A.; Jeffreys, R.M.; Lavaleye, M.S.S.; Davies, A.J.; Bergman, M.J.N.; Watmough, T.; Witbaard, R.

    2012-01-01

    The finding of a previously undescribed cold-water coral reef (Banana Reef) in the Scottish Mingulay reef complex, with denser coverage of living Lophelia pertusa than the principal Mingulay 1 Reef, was the incentive for a comparative study of the food supply to the 2 reefs. Suspended particulate

  1. Coralline reefs classification in Banco Chinchorro, Mexico

    Contreras-Silva, Ameris I.; López-Caloca, Alejandra A.

    2009-09-01

    The coralline reefs in Banco Chinchorro, Mexico, are part of the great reef belt of the western Atlantic. This reef complex is formed by an extensive coralline structure with great biological richness and diversity of species. These colonies are considered highly valuable ecologically, economically, socially and culturally, and they also inherently provide biological services. Fishing and scuba diving have been the main economic activities in this area for decades. However, in recent years, there has been a bleaching process and a decrease of the coral colonies in Quintana Roo, Mexico. This drop is caused mainly by the production activities performed in the oil platforms and the presence of hurricanes among other climatic events. The deterioration of the reef system can be analyzed synoptically using remote sensing. Thanks to this type of analysis, it is possible to have updated information of the reef conditions. In this paper, satellite imagery in Landsat TM and SPOT 5 is applied in the coralline reefs classification in the 1980- 2006 time period. Thus, an integral analysis of the optical components of the water surrounding the coralline reefs, such as on phytoplankton, sediments, yellow substance and even on the same water adjacent to the coral colonies, is performed. The use of a texture algorithm (Markov Random Field) was a key tool for their identification. This algorithm, does not limit itself to image segmentation, but also works on edge detection. In future work the multitemporal analysis of the results will determine the deterioration degree of these habitats and the conservation status of the coralline areas.

  2. Fluxomics of the Eastern Oyster for Environmental Stress Studies

    Andrey P. Tikunov

    2014-01-01

    Full Text Available The metabolism of 2-13C/15N-glycine and U-13C-glucose was determined in four tissue blocks (adductor muscle, stomach and digestive gland, mantle, and gills of the Eastern oyster (Crassostrea virginica using proton (1H and carbon-13 (13C nuclear magnetic resonance (NMR spectroscopy. The oysters were treated in aerated seawater with three treatments (5.5 mM U-13C-glucose, 2.7 mM 2-13C/15N-glycine, and 5.5 mM U-13C-glucose plus 2.7 mM 2-13C/15N-glycine and the relative mass balance and 13C fractional enrichments were determined in the four tissue blocks. In all tissues, glycine was metabolized by the glycine cycle forming serine exclusively in the mitochondria by the glycine cleavage system forming 2,3-13C-serine. In muscle, a minor amount of serine-derived pyruvate entered the Krebs cycle as substantiated by detection of a trace of 2,3-13C-aspartate. In all tissues, U-13C-glucose formed glycogen by glycogen synthesis, alanine by glycolysis, and glutamate and aspartate through the Krebs cycle. Alanine was formed exclusively from glucose via alanine transaminase and not glycine via alanine-glyoxylate transaminase. Based on isotopomer analysis, pyruvate carboxylase and pyruvate dehydrogenase appeared to be equal points for pyruvate entry into the Krebs cycle. In the 5.5 mM U-13C-glucose plus 2.7 mM 2-13C/15N-glycine emergence treatment used to simulate 12 h of “low tide”, oysters accumulated more 13C-labeled metabolites, including both anaerobic glycolytic and aerobic Krebs cycle intermediates. The aerobic metabolites could be the biochemical result of the gaping behavior of mollusks during emergence. The change in tissue distribution and mass balance of 13C-labeled nutrients (U-13C-glucose and 2-13C/15N-glycine provides the basis for a new quantitative fluxomic method for elucidating sub-lethal environmental effects in marine organisms called whole body mass balance phenotyping (WoMBaP.

  3. Adsorption of copper to different biogenic oyster shell structures

    Wu, Qiong; Chen, Jie [College of Materials Science and Engineering, Fuzhou University, New Campus, Minhou, Fujian Province 350108 (China); Clark, Malcolm [Marine Ecology Research Centre, School of Environment, Science and Engineering, Southern Cross University, P.O. Box 157, Lismore, NSW 2480 (Australia); Yu, Yan, E-mail: yuyan_1972@126.com [College of Materials Science and Engineering, Fuzhou University, New Campus, Minhou, Fujian Province 350108 (China)

    2014-08-30

    Graphical abstract: - Highlights: • Adsorption of copper to waste oyster shell occurs rapidly at pH 5.5. • Copper adsorbs to the different structures of oyster shell at different rates. • The prismatic layer dominates copper sorption rather than the nacreous layer. • SEM analysis shows a porous open network structure to the prismatic layer. • Surface ζ-potentials establish electrostatic attraction to drive copper sorption. - Abstract: The removal of copper from solution by oyster shell powder was investigated for potential wastewater treatment uses. In particular, adsorption behavior differences between the prismatic (PP) and nacreous (NP) shell layers, and how this affects copper removal, were investigated. Experimental results indicated that copper adsorption was highly pH-dependent with optimal copper removal at pH 5.5, where the powdered whole raw shell (RP) removed up to 99.9% of the copper within 24 h at a 10 mg/L initial copper concentration. Langmuir and Freundlich models were used to analyze the isotherm PP, NP and RP data. These results showed a strong homogeneous Langmuir model for low initial copper concentrations (5–30 mg/L) to both RP and PP layer, while strong agreement with a heterogeneous Freundlich model for high initial copper concentrations (30–200 mg/L); nevertheless, a homogeneous Langmuir model provided the best fit for the more dense NP layer across the initial concentration range (5–200 mg/L). The distribution coefficient (K{sub d}) value of PP layer for each initial concentration investigated was substantially higher than the NP layer and it was also found that the PP layer dominated the adsorption process with an adsorption capacity of 8.9 mg/g, while the adsorption capacity of the NP layer was 2.6 mg/g. These differences are believed to be because of the more porous structure of the PP layer, which was confirmed by scanning electron microscopy, infrared spectroscopy, energy-dispersive X-ray spectroscopy, and

  4. Nitrogenous compounds changes in emersed oysters: Crassostrea gigas

    Rafrafi, Sarra; Uglow, Roger F.

    2009-01-01

    The effects of emersing oysters ( Crassostrea gigas) for up to 66 h at 4 °C under humid air and nitrogen atmospheres were studied. A significant, gradual body mass loss occurred under nitrogen (8.36 ± 0.85% final weight loss) but no significant loss occurred under humid air (4.92 ± 2.67% final weight loss). Emersion duration and the mantle cavity fluid (MCF) total ammonia (TA) concentration showed a positive, linear relationship ( r2 = 0.73 and 0.74 under humid air and N 2, respectively). The MCF TA and trimethylamine (TMA) contents were also positively related ( r2 = 0.64 and 0.69 under humid air and N 2, respectively). Proline was the most abundant soft tissue free amino acid (71.07 ± 11.8%) in the control group and its concentration did not change significantly under either treatment. The concentration of alanine and valine increased significantly only under humid air. Under N 2, the concentrations of valine and lysine increased significantly and aspartate decreased significantly. Succinate showed a large increase during the first 6 h of emersion under both treatments but significantly more was accumulated in the N 2-exposed group (4.2-fold increase and 8.1-fold increase for the humid air- and N 2-exposed groups, respectively). The succinate concentration difference remained higher in the N 2-treated groups but, in the final 24 h, levels decreased again (quadratic regressions of r2 = 0.97 and 0.95 under humid air and N 2, respectively). Although the trend of succinate accumulation was similar under both treatments, the groups held under nitrogen did not gape (whereas those under humid air did). It is concluded that the implications of gaping behaviour on succinate accumulation in the initial hours of emersion have considerable ecological significance for oysters which occupy habitats in which they may become emersed for some hours naturally. Gaping behaviour also has considerable commercial implications because emersion occurs frequently during the marketing

  5. Adsorption of copper to different biogenic oyster shell structures

    Wu, Qiong; Chen, Jie; Clark, Malcolm; Yu, Yan

    2014-01-01

    Graphical abstract: - Highlights: • Adsorption of copper to waste oyster shell occurs rapidly at pH 5.5. • Copper adsorbs to the different structures of oyster shell at different rates. • The prismatic layer dominates copper sorption rather than the nacreous layer. • SEM analysis shows a porous open network structure to the prismatic layer. • Surface ζ-potentials establish electrostatic attraction to drive copper sorption. - Abstract: The removal of copper from solution by oyster shell powder was investigated for potential wastewater treatment uses. In particular, adsorption behavior differences between the prismatic (PP) and nacreous (NP) shell layers, and how this affects copper removal, were investigated. Experimental results indicated that copper adsorption was highly pH-dependent with optimal copper removal at pH 5.5, where the powdered whole raw shell (RP) removed up to 99.9% of the copper within 24 h at a 10 mg/L initial copper concentration. Langmuir and Freundlich models were used to analyze the isotherm PP, NP and RP data. These results showed a strong homogeneous Langmuir model for low initial copper concentrations (5–30 mg/L) to both RP and PP layer, while strong agreement with a heterogeneous Freundlich model for high initial copper concentrations (30–200 mg/L); nevertheless, a homogeneous Langmuir model provided the best fit for the more dense NP layer across the initial concentration range (5–200 mg/L). The distribution coefficient (K d ) value of PP layer for each initial concentration investigated was substantially higher than the NP layer and it was also found that the PP layer dominated the adsorption process with an adsorption capacity of 8.9 mg/g, while the adsorption capacity of the NP layer was 2.6 mg/g. These differences are believed to be because of the more porous structure of the PP layer, which was confirmed by scanning electron microscopy, infrared spectroscopy, energy-dispersive X-ray spectroscopy, and

  6. Pacific Reef Assessment and Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structures (ARMS) Deployed at Coral Reef Sites across the U.S. Pacific from 2008 to 2012

    National Oceanic and Atmospheric Administration, Department of Commerce — To support a long-term program for sustainable management and conservation of coral reef ecosystems, from 2008, Autonomous Reef Monitoring Structures (ARMS) have...

  7. Biomass and Abundance of Herbivorous Fishes on Coral Reefs off ...

    effects of fishing intensity, reef geomorphology and benthic cover. Distance from the .... on herbivorous fish communities relevant to the proposed ... fragments, nearshore coastal fringing reefs ..... Over-fishing and coral bleaching pose the most ...

  8. National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Pacific Remote Island Areas from 2011 to 2015

    National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

  9. National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Marianas Archipelago from 2011 to 2014

    National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

  10. National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Hawaiian Archipelago from 2010 to 2016

    National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

  11. National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across American Samoa from 2012 to 2015

    National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

  12. 2015 Carbbean Reef Fish Survey (PC1505, EK60)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2015 Caribbean Reef Fish Survey were to assess relative abundance of reef fish species around the US Caribbean Islands, estimate length-frequency...

  13. SEAMAP Caribbean Reef Fish Survey (PC1202, ME70)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2012 SEAMAP Caribbean Reef Fish Survey were to assess relative abundance of reef fish species around the US Caribbean Islands, estimate...

  14. 2012 SEAMAP Reef Fish Survey (PC1201, ME70)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2012 SEAMAP Reef Fish Survey were to collect video data of reef fish on western Gulf of Mexico shelf-edge banks to facilitate assessments of...

  15. 2012 SEAMAP Reef Fish Survey (PC1201, EK60)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2012 SEAMAP Reef Fish Survey were to collect video data of reef fish on western Gulf of Mexico shelf-edge banks to facilitate assessments of...

  16. The exposure of the Great Barrier Reef to ocean acidification

    Mongin, Mathieu; Baird, Mark E.; Tilbrook, Bronte; Matear, Richard J.; Lenton, Andrew; Herzfeld, Mike; Wild-Allen, Karen; Skerratt, Jenny; Margvelashvili, Nugzar; Robson, Barbara J.; Duarte, Carlos M.; Gustafsson, Malin S. M.; Ralph, Peter J.; Steven, Andrew D. L.

    2016-01-01

    The Great Barrier Reef (GBR) is founded on reef-building corals. Corals build their exoskeleton with aragonite, but ocean acidification is lowering the aragonite saturation state of seawater (Ωa). The downscaling of ocean acidification projections

  17. SEAMAP Caribbean Reef Fish Survey (PC1202, EK60)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2012 SEAMAP Caribbean Reef Fish Survey were to assess relative abundance of reef fish species around the US Caribbean Islands, estimate...

  18. Recent and relict topography of Boo Bee patch reef, Belize

    Halley, R.B.; Shinn, E.A.; Hudson, J.H.; Lidz, B.; Taylor, D.L.

    1977-01-01

    Five core borings were taken on and around Boo Bee Patch Reef to better understand the origin of such shelf lagoon reefs. The cores reveal 4 stages of development: (1) subaerial exposure of a Pleistocene "high" having about 8 meters of relief, possibly a Pleistocene patch reef; (2) deposition of peat and impermeable terrigenous clay 3 meters thick around the high; (3) initiation of carbonate sediment production by corals and algae on the remaining 5 meters of hard Pleistocene topography and carbonate mud on the surrounding terrigenous clay; and (4) accelerated organic accumulation on the patch reef. Estimates of patch reef sedimentation rates (1.6 m/1000 years) are 3 to 4 times greater than off-reef sedimentation rates (0.4-0.5 m/1000 years). During periods of Pleistocene sedimentation on the Belize shelf, lagoon patch reefs may have grown above one another, stacking up to form reef accumulation of considerable thickness.

  19. Zonation of uplifted pleistocene coral reefs on barbados, west indies.

    Mesolella, K J

    1967-05-05

    The coral species composition of uplifted Pleistocene reefs on Barbados is very similar to Recent West Indian reefs. Acropora palmata, Acropora cervicornis, and Montastrea annularis are qtuantitatively the most important of the coral species.

  20. 2013 SEAMAP Reef Fish Survey (PC1302, ME70)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives of the 2013 SEAMAP Reef Fish Survey were to collect video data of reef fish on western Gulf of Mexico shelf-edge banks to facilitate assessments of...