Integration Of PanDA Workload Management System With Supercomputers

CERN Document Server

Klimentov, Alexei; The ATLAS collaboration; Maeno, Tadashi; Mashinistov, Ruslan; Nilsson, Paul; Oleynik, Danila; Panitkin, Sergey; Read, Kenneth; Ryabinkin, Evgeny; Wenaus, Torre

2015-01-01

The Large Hadron Collider (LHC), operating at the international CERN Laboratory in Geneva, Switzerland, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe, and were recently credited for the discovery of a Higgs boson. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 140 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 100,000 co...

ATLAS BigPanDA Monitoring and Its Evolution

CERN Document Server

Wenaus, Torre; The ATLAS collaboration; Korchuganova, Tatiana

2016-01-01

BigPanDA is the latest generation of the monitoring system for the Production and Distributed Analysis (PanDA) system. The BigPanDA monitor is a core component of PanDA and also serves the monitoring needs of the new ATLAS Production System Prodsys-2. BigPanDA has been developed to serve the growing computation needs of the ATLAS Experiment and the wider applications of PanDA beyond ATLAS. Through a system-wide job database, the BigPanDA monitor provides a comprehensive and coherent view of the tasks and jobs executed by the system, from high level summaries to detailed drill-down job diagnostics. The system has been in production and has remained in continuous development since mid 2014, today effectively managing more than 2 million jobs per day distributed over 150 computing centers worldwide. BigPanDA also delivers web-based analytics and system state views to groups of users including distributed computing systems operators, shifters, physicist end-users, computing managers and accounting services. Provi...

ATLAS BigPanDA Monitoring

CERN Document Server

Padolski, Siarhei; The ATLAS collaboration; Klimentov, Alexei; Korchuganova, Tatiana

2017-01-01

BigPanDA monitoring is a web based application which provides various processing and representation of the Production and Distributed Analysis (PanDA) system objects states. Analyzing hundreds of millions of computation entities such as an event or a job BigPanDA monitoring builds different scale and levels of abstraction reports in real time mode. Provided information allows users to drill down into the reason of a concrete event failure or observe system bigger picture such as tracking the computation nucleus and satellites performance or the progress of whole production campaign. PanDA system was originally developed for the Atlas experiment and today effectively managing more than 2 million jobs per day distributed over 170 computing centers worldwide. BigPanDA is its core component commissioned in the middle of 2014 and now is the primary source of information for ATLAS users about state of their computations and the source of decision support information for shifters, operators and managers. In this wor...

ATLAS BigPanDA Monitoring

CERN Document Server

Padolski, Siarhei; The ATLAS collaboration

2017-01-01

BigPanDA monitoring is a web-based application that provides various processing and representation of the Production and Distributed Analysis (PanDA) system objects states. Analysing hundreds of millions of computation entities such as an event or a job BigPanDA monitoring builds different scale and levels of abstraction reports in real time mode. Provided information allows users to drill down into the reason of a concrete event failure or observe system bigger picture such as tracking the computation nucleus and satellites performance or the progress of whole production campaign. PanDA system was originally developed for the Atlas experiment and today effectively managing more than 2 million jobs per day distributed over 170 computing centers worldwide. BigPanDA is its core component commissioned in the middle of 2014 and now is the primary source of information for ATLAS users about state of their computations and the source of decision support information for shifters, operators and managers. In this work...

gLExec Integration with the ATLAS PanDA Workload Management System

CERN Document Server

Karavakis, Edward; Campana, Simone; De, Kaushik; Di Girolamo, Alessandro; Litmaath, Maarten; Maeno, Tadashi; Medrano Llamas, Ramon; Nilsson, Paul; Wenaus, Torre

2015-01-01

ATLAS user jobs are executed on Worker Nodes (WNs) by pilots sent to sites by pilot factories. This paradigm serves to allow a high job reliability and although it has clear advantages, such as making the working environment homogeneous, the approach presents security and traceability challenges. To address these challenges, gLExec can be used to let the payloads for each user be executed under a different UNIX user id that uniquely identifies the ATLAS user. This paper describes the recent improvements and evolution of the security model within the ATLAS PanDA system, including improvements in the PanDA pilot, in the PanDA server and their integration with MyProxy, a credential caching system that entitles a person or a service to act in the name of the issuer of the credential. Finally, it presents results from ATLAS user jobs running with gLExec and describes the deployment campaign within ATLAS.

Integration Of PanDA Workload Management System With Supercomputers for ATLAS

CERN Document Server

Oleynik, Danila; The ATLAS collaboration; De, Kaushik; Wenaus, Torre; Maeno, Tadashi; Barreiro Megino, Fernando Harald; Nilsson, Paul; Guan, Wen; Panitkin, Sergey

2016-01-01

The Large Hadron Collider (LHC), operating at the international CERN Laboratory in Geneva, Switzerland, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe, and were recently credited for the discovery of a Higgs boson. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production ANd Distributed Analysis system) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more t...

In vivo imaging of therapy response to a novel Pan-HER antibody mixture using FDG and FLT positron emission tomography

DEFF Research Database (Denmark)

Nielsen, Carsten H; Jensen, Mette M; Kristensen, Lotte K

2015-01-01

response obtained by targeting HER family members individually or simultaneously using the novel monoclonal antibody (mAb) mixture Pan-HER. EXPERIMENTAL DESIGN AND RESULTS: Mice with subcutaneous BxPC-3 pancreatic adenocarcinomas were divided into five groups receiving vehicle or mAb mixtures directed...... to Pan-HER therapy. FDG and FLT PET/CT imaging should be considered as imaging biomarkers in clinical evaluation of the Pan-HER mAb mixture....

An electronic pan/tilt/magnify and rotate camera system

International Nuclear Information System (INIS)

Zimmermann, S.; Martin, H.L.

1992-01-01

A new camera system has been developed for omnidirectional image-viewing applications that provides pan, tilt, magnify, and rotational orientation within a hemispherical field of view (FOV) without any moving parts. The imaging device is based on the fact that the image from a fish-eye lens, which produces a circular image of an entire hemispherical FOV, can be mathematically corrected using high-speed electronic circuitry. More specifically, an incoming fish-eye image from any image acquisition source is captured in the memory of the device, a transformation is performed for the viewing region of interest and viewing direction, and a corrected image is output as a video image signal for viewing, recording, or analysis. The image transformation device can provide corrected images at frame rates compatible with RS-170 standard video equipment. As a result, this device can accomplish the functions of pan, tilt, rotation, and magnification throughout a hemispherical FOV without the need for any mechanical devices. Multiple images, each with different image magnifications and pan-tilt-rotate parameters, can be obtained from a single camera

The Pan-STARRS PS1 Image Processing Pipeline

Science.gov (United States)

Magnier, E.

The Pan-STARRS PS1 Image Processing Pipeline (IPP) performs the image processing and data analysis tasks needed to enable the scientific use of the images obtained by the Pan-STARRS PS1 prototype telescope. The primary goals of the IPP are to process the science images from the Pan-STARRS telescopes and make the results available to other systems within Pan-STARRS. It also is responsible for combining all of the science images in a given filter into a single representation of the non-variable component of the night sky defined as the "Static Sky". To achieve these goals, the IPP also performs other analysis functions to generate the calibrations needed in the science image processing, and to occasionally use the derived data to generate improved astrometric and photometric reference catalogs. It also provides the infrastructure needed to store the incoming data and the resulting data products. The IPP inherits lessons learned, and in some cases code and prototype code, from several other astronomy image analysis systems, including Imcat (Kaiser), the Sloan Digital Sky Survey (REF), the Elixir system (Magnier & Cuillandre), and Vista (Tonry). Imcat and Vista have a large number of robust image processing functions. SDSS has demonstrated a working analysis pipeline and large-scale databasesystem for a dedicated project. The Elixir system has demonstrated an automatic image processing system and an object database system for operational usage. This talk will present an overview of the IPP architecture, functional flow, code development structure, and selected analysis algorithms. Also discussed is the HW highly parallel HW configuration necessary to support PS1 operational requirements. Finally, results are presented of the processing of images collected during PS1 early commissioning tasks utilizing the Pan-STARRS Test Camera #3.

The Consolidation on Banking Supervision in the Context of a Pan European Banking System

Directory of Open Access Journals (Sweden)

Teodora Barbu

2007-03-01

Full Text Available The diversity of national banking systems in the European banking system and the absence of consolidated supervision creates the premises for a series of interrogations whose essence is the same: Is it possible to discuss about a Pan European Banking System? The starting point in answering this question was the efforts to create a single banking market, which took place in 1973-1999, and the impact of integration on the European Banking Industry. Among the most representative aspects, it must be emphasized the necessity of consolidating banking supervision at an European level, considering that the International Banking Community studies the problematic of banking regulations at a global level. The two dimensions of the prudential and European bank supervision device – the geographic and the institutional – demand the creation of a structural reform in order to ensure the functioning of a Pan European system of banking supervision and regulations. The considerations on the Consolidation of European Banking Supervision draws into discussion the Financial Supervision Authority which has generalized as an applicable model in numerous European countries and has been mentioned as an alternative of Pan European banking supervision. In the process of the integration of the banking sector, the Basel II Accord represents an opportunity in reaching a convergence of national regulations and practices in matters of risk management, considering that these actions are in line with the preoccupations of realizing a Pan European banking system. Thus, the creation of Pan European banking system involves actions in more directions: legal, institutional, operational meant to ensure the consolidation of banking supervision.

Extending the ATLAS PanDA Workload Management System for New Big Data Applications

CERN Document Server

De, K; The ATLAS collaboration; Maeno, T; Nilsson, P; Panitkin, S; Vaniachine, A; Wenaus, T; Yu, D

2013-01-01

The LHC experiments are today at the leading edge of large scale distributed data-intensive computational science. The LHC's ATLAS experiment processes data volumes which are particularly extreme, over 130 PB to date, distributed worldwide at over of 120 sites. An important element in the success of the exciting physics results from ATLAS is the highly scalable integrated workflow and dataflow management afforded by the PanDA workload management system, used for all the distributed computing needs of the experiment. The PanDA design is not experiment specific and PanDA is now being extended to support other data intensive scientific applications. Alpha-Magnetic Spectrometer, an astro-particle experiment on the International Space Station, and the Compact Muon Solenoid, an LHC experiment, have successfully evaluated PanDA and are pursuing its adoption. PanDA was cited as an example of "a high performance, fault tolerant software for fast, scalable access to data repositories of many kinds" during the "Big Data...

Improvements for PanDA and intermediate layers

Energy Technology Data Exchange (ETDEWEB)

Kawamura, Gen; Magradze, Erekle; Musheghyan, Haykuhi; Nadal, Jordi; Quadt, Arnulf; Rzehorz, Gerhard [II. Physikalisches Institut, Georg-August-Universitaet Goettingen (Germany)

2015-07-01

The PanDA Production and Distributed Analysis system is handling the ATLAS workload management for production and distributed analysis processing. It was designed for analysis as well as production for High Energy Physics. One of the advantages of this pilot based system is, that it has its own integrated monitoring solution. Monitoring is a method used in computing, it means that a certain process is observed and overseen and is usually also protocolled. In the case of a process or system failure, a responsible person should be notified and countermeasures taken. Since PanDA is very versatile, it can also be used to process jobs on a computing Cloud, instead of just using the Grid(WLCG). Cloud computing resources can be provided by private companies, that bill the resources that are actually being used, for example CPU power over time. The advantage of this is obvious if one looks at the cost. They are basically the same, whether a huge task is done on little CPU power over a long time or on plenty of CPU power in a short time. For these reasons, a close monitoring, for example by the PanDA system for the usage of Cloud resources is important.

Overview of ATLAS PanDA Workload Management

Science.gov (United States)

Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Stewart, G. A.; Walker, R.; Stradling, A.; Caballero, J.; Potekhin, M.; Smith, D.; ATLAS Collaboration

2011-12-01

The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

Overview of ATLAS PanDA Workload Management

International Nuclear Information System (INIS)

Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Stewart, G.A.; Walker, R.; Stradling, A.; Caballero, J.; Potekhin, M.; Smith, D.

2011-01-01

The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

The Consolidation on Banking Supervision in the Context of a Pan European Banking System

Directory of Open Access Journals (Sweden)

Teodora Barbu

2007-03-01

In the process of the integration of the banking sector, the Basel II Accord represents an opportunity in reaching a convergence of national regulations and practices in matters of risk management, considering that these actions are in line with the preoccupations of realizing a Pan European banking system. Thus, the creation of Pan European banking system involves actions in more directions: legal, institutional, operational meant to ensure the consolidation of banking supervision.

Pan-pan Girls: Humiliating Liberation in Postwar Japanese Literature

Directory of Open Access Journals (Sweden)

Rumi Sakamoto

2010-09-01

Full Text Available This paper looks at some literary representations of the ‘pan-pan girls’ in postwar Japan. ‘Pan-pan’ is a derogatory term for street prostitutes who (mostly served the soldiers of the occupying forces. Immediately after World War II, the Japanese government established the RAA (Recreation Amusement Association and employed several thousand women to provide sexual services for foreign soldiers, ostensibly to protect Japanese women of middle and upper classes from rape and other violence. When the RAA was closed down in 1946 due to the US concern over widespread VD, many of the women who lost their jobs went out on the street and became private and illegal prostitutes – the pan-pan girls. With their red lipstick, cigarettes, nylon stockings and high-heel shoes, often holding onto the arms of tall, uniformed American GIs, the ‘pan-pan girls’ became a symbol of the occupation, and have been textually reproduced throughout the postwar period. This paper analyses the images and representations of the ‘pan-pan girls’ in postwar Japanese literature, to consider how the ‘pan-pan girls’ have functioned as a metaphor for the occupation and contributed to the public memory construction of the occupation. I identify some major codes of representations (victimisation, humiliation, and national trauma; eroticism and decadence; sexual freedom and materialism and argue that the highly gendered and sexualised bodies of the ‘pan-pan girls’ have continued to allow simplistic and selective remembering of the occupation at the expense of recalling the pivotal role of Japanese patriarchy in the postwar period.

SWEPP PAN assay system uncertainty analysis: Passive mode measurements of graphite waste

International Nuclear Information System (INIS)

Blackwood, L.G.; Harker, Y.D.; Meachum, T.R.; Yoon, Woo Y.

1997-07-01

The Idaho National Engineering and Environmental Laboratory is being used as a temporary storage facility for transuranic waste generated by the U.S. Nuclear Weapons program at the Rocky Flats Plant (RFP) in Golden, Colorado. Currently, there is a large effort in progress to prepare to ship this waste to the Waste Isolation Pilot Plant (WIPP) in Carlsbad, New Mexico. In order to meet the TRU Waste Characterization Quality Assurance Program Plan nondestructive assay compliance requirements and quality assurance objectives, it is necessary to determine the total uncertainty of the radioassay results produced by the Stored Waste Examination Pilot Plant (SWEPP) Passive Active Neutron (PAN) radioassay system. To this end a modified statistical sampling and verification approach has been developed to determine the total uncertainty of a PAN measurement. In this approach the total performance of the PAN nondestructive assay system is simulated using computer models of the assay system and the resultant output is compared with the known input to assess the total uncertainty. This paper is one of a series of reports quantifying the results of the uncertainty analysis of the PAN system measurements for specific waste types and measurement modes. In particular this report covers passive mode measurements of weapons grade plutonium-contaminated graphite molds contained in 208 liter drums (waste code 300). The validity of the simulation approach is verified by comparing simulated output against results from measurements using known plutonium sources and a surrogate graphite waste form drum. For actual graphite waste form conditions, a set of 50 cases covering a statistical sampling of the conditions exhibited in graphite wastes was compiled using a Latin hypercube statistical sampling approach

PanDA Beyond ATLAS : A Scalable Workload Management System For Data Intensive Science

CERN Document Server

Borodin, M; The ATLAS collaboration; Jha, S; Golubkov, D; Klimentov, A; Maeno, T; Nilsson, P; Oleynik, D; Panitkin, S; Petrosyan, A; Schovancova, J; Vaniachine, A; Wenaus, T

2014-01-01

The LHC experiments are today at the leading edge of large scale distributed data-intensive computational science. The LHC's ATLAS experiment processes data volumes which are particularly extreme, over 140 PB to date, distributed worldwide at over of 120 sites. An important element in the success of the exciting physics results from ATLAS is the highly scalable integrated workflow and dataflow management afforded by the PanDA workload management system, used for all the distributed computing needs of the experiment. The PanDA design is not experiment specific and PanDA is now being extended to support other data intensive scientific applications. PanDA was cited as an example of "a high performance, fault tolerant software for fast, scalable access to data repositories of many kinds" during the "Big Data Research and Development Initiative" announcement, a 200 million USD U.S. government investment in tools to handle huge volumes of digital data needed to spur science and engineering discoveries. In this talk...

SWEPP PAN assay system uncertainty analysis: Active mode measurements of solidified aqueous sludge waste

International Nuclear Information System (INIS)

Blackwood, L.G.; Harker, Y.D.; Meachum, T.R.

1997-12-01

The Idaho National Engineering and Environmental Laboratory is being used as a temporary storage facility for transuranic waste generated by the US Nuclear Weapons program at the Rocky Flats Plant (RFP) in Golden, Colorado. Currently, there is a large effort in progress to prepare to ship this waste to the Waste Isolation Pilot Plant (WIPP) in Carlsbad, New Mexico. In order to meet the TRU Waste Characterization Quality Assurance Program Plan nondestructive assay compliance requirements and quality assurance objectives, it is necessary to determine the total uncertainty of the radioassay results produced by the Stored Waste Examination Pilot Plant (SWEPP) Passive Active Neutron (PAN) radioassay system. This paper is one of a series of reports quantifying the results of the uncertainty analysis of the PAN system measurements for specific waste types and measurement modes. In particular this report covers active mode measurements of weapons grade plutonium-contaminated aqueous sludge waste contained in 208 liter drums (item description codes 1, 2, 7, 800, 803, and 807). Results of the uncertainty analysis for PAN active mode measurements of aqueous sludge indicate that a bias correction multiplier of 1.55 should be applied to the PAN aqueous sludge measurements. With the bias correction, the uncertainty bounds on the expected bias are 0 ± 27%. These bounds meet the Quality Assurance Program Plan requirements for radioassay systems

Integration of PanDA workload management system with Titan supercomputer at OLCF

Science.gov (United States)

De, K.; Klimentov, A.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.

2015-12-01

The PanDA (Production and Distributed Analysis) workload management system (WMS) was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. While PanDA currently distributes jobs to more than 100,000 cores at well over 100 Grid sites, the future LHC data taking runs will require more resources than Grid computing can possibly provide. To alleviate these challenges, ATLAS is engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with Titan supercomputer at Oak Ridge Leadership Computing Facility (OLCF). The current approach utilizes a modified PanDA pilot framework for job submission to Titan's batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on Titan's multicore worker nodes. It also gives PanDA new capability to collect, in real time, information about unused worker nodes on Titan, which allows precise definition of the size and duration of jobs submitted to Titan according to available free resources. This capability significantly reduces PanDA job wait time while improving Titan's utilization efficiency. This implementation was tested with a variety of Monte-Carlo workloads on Titan and is being tested on several other supercomputing platforms. Notice: This manuscript has been authored, by employees of Brookhaven Science Associates, LLC under Contract No. DE-AC02-98CH10886 with the U.S. Department of Energy. The publisher by accepting the manuscript for publication acknowledges that the United States Government retains a non-exclusive, paid-up, irrevocable, world-wide license to publish or reproduce the published form of this manuscript, or allow others to do so, for United States Government purposes.

Migration of ATLAS PanDA to CERN

International Nuclear Information System (INIS)

Stewart, Graeme Andrew; Klimentov, Alexei; Maeno, Tadashi; Nevski, Pavel; Nowak, Marcin; De Castro Faria Salgado, Pedro Emanuel; Wenaus, Torre; Koblitz, Birger; Lamanna, Massimo

2010-01-01

The ATLAS Production and Distributed Analysis System (PanDA) is a key component of the ATLAS distributed computing infrastructure. All ATLAS production jobs, and a substantial amount of user and group analysis jobs, pass through the PanDA system, which manages their execution on the grid. PanDA also plays a key role in production task definition and the data set replication request system. PanDA has recently been migrated from Brookhaven National Laboratory (BNL) to the European Organization for Nuclear Research (CERN), a process we describe here. We discuss how the new infrastructure for PanDA, which relies heavily on services provided by CERN IT, was introduced in order to make the service as reliable as possible and to allow it to be scaled to ATLAS's increasing need for distributed computing. The migration involved changing the backend database for PanDA from MySQL to Oracle, which impacted upon the database schemas. The process by which the client code was optimised for the new database backend is discussed. We describe the procedure by which the new database infrastructure was tested and commissioned for production use. Operations during the migration had to be planned carefully to minimise disruption to ongoing ATLAS offline computing. All parts of the migration were fully tested before commissioning the new infrastructure and the gradual migration of computing resources to the new system allowed any problems of scaling to be addressed.

Civic Responsibility and Human Rights Education: A Pan-Educational Alliance for Social Justice

Science.gov (United States)

Osanloo, Azadeh F.

2009-01-01

Educating global citizens to have knowledge of world political and economic systems and conditions is imperative as the notion of the "citizen" is constantly evolving. This type of civic education needs to involve critical thinking skills that are pan-educational and allow for cross-cultural discussion that span all public spheres and…

The occurrence of large branchiopod crustaceans in perennial pans ...

African Journals Online (AJOL)

Pans are isolated, shallow depressions that are endorheic in nature. Because of the natural hydrological functioning of pans, these systems are usually restricted to arid regions and complete desiccation occurs seasonally. In the eastern provinces of South Africa many pans are perennial in nature often remaining inundated ...

Experience with ATLAS MySQL PanDA database service

International Nuclear Information System (INIS)

Smirnov, Y; Wlodek, T; Hover, J; Smith, J; Wenaus, T; Yu, D; De, K; Ozturk, N

2010-01-01

The PanDA distributed production and analysis system has been in production use for ATLAS data processing and analysis since late 2005 in the US, and globally throughout ATLAS since early 2008. Its core architecture is based on a set of stateless web services served by Apache and backed by a suite of MySQL databases that are the repository for all PanDA information: active and archival job queues, dataset and file catalogs, site configuration information, monitoring information, system control parameters, and so on. This database system is one of the most critical components of PanDA, and has successfully delivered the functional and scaling performance required by PanDA, currently operating at a scale of half a million jobs per week, with much growth still to come. In this paper we describe the design and implementation of the PanDA database system, its architecture of MySQL servers deployed at BNL and CERN, backup strategy and monitoring tools. The system has been developed, thoroughly tested, and brought to production to provide highly reliable, scalable, flexible and available database services for ATLAS Monte Carlo production, reconstruction and physics analysis.

Experience with ATLAS MySQL PanDA database service

Energy Technology Data Exchange (ETDEWEB)

Smirnov, Y; Wlodek, T; Hover, J; Smith, J; Wenaus, T; Yu, D [Physics Department, Brookhaven National Laboratory, Upton, NY 11973-5000 (United States); De, K; Ozturk, N [Department of Physics, University of Texas at Arlington, Arlington, TX, 76019 (United States)

2010-04-01

The PanDA distributed production and analysis system has been in production use for ATLAS data processing and analysis since late 2005 in the US, and globally throughout ATLAS since early 2008. Its core architecture is based on a set of stateless web services served by Apache and backed by a suite of MySQL databases that are the repository for all PanDA information: active and archival job queues, dataset and file catalogs, site configuration information, monitoring information, system control parameters, and so on. This database system is one of the most critical components of PanDA, and has successfully delivered the functional and scaling performance required by PanDA, currently operating at a scale of half a million jobs per week, with much growth still to come. In this paper we describe the design and implementation of the PanDA database system, its architecture of MySQL servers deployed at BNL and CERN, backup strategy and monitoring tools. The system has been developed, thoroughly tested, and brought to production to provide highly reliable, scalable, flexible and available database services for ATLAS Monte Carlo production, reconstruction and physics analysis.

The ATLAS PanDA Pilot in Operation

International Nuclear Information System (INIS)

Nilsson, P; De, K; Stradling, A; Caballero, J; Maeno, T; Wenaus, T

2011-01-01

The Production and Distributed Analysis system (PanDA) was designed to meet ATLAS requirements for a data-driven workload management system capable of operating at LHC data processing scale. Submitted jobs are executed on worker nodes by pilot jobs sent to the grid sites by pilot factories. This paper provides an overview of the PanDA pilot system and presents major features added in light of recent operational experience, including multi-job processing, advanced job recovery for jobs with output storage failures, gLExec based identity switching from the generic pilot to the actual user, and other security measures. The PanDA system serves all ATLAS distributed processing and is the primary system for distributed analysis; it is currently used at over 100 sites worldwide. We analyze the performance of the pilot system in processing real LHC data on the OSG, EGI and Nordugrid infrastructures used by ATLAS, and describe plans for its evolution.

PD2P : PanDA Dynamic Data Placement for ATLAS

OpenAIRE

Maeno, T; De, K; Panitkin, S

2012-01-01

The PanDA (Production and Distributed Analysis) system plays a key role in the ATLAS distributed computing infrastructure. PanDA is the ATLAS workload management system for processing all Monte-Carlo (MC) simulation and data reprocessing jobs in addition to user and group analysis jobs. The PanDA Dynamic Data Placement (PD2P) system has been developed to cope with difficulties of data placement for ATLAS. We will describe the design of the new system, its performance during the past year of d...

gLExec and MyProxy integration in the ATLAS/OSG PanDA workload management system

International Nuclear Information System (INIS)

Caballero, J; Hover, J; Maeno, T; Potekhin, M; Wenaus, T; Zhao, X; Litmaath, M; Nilsson, P

2010-01-01

Worker nodes on the grid exhibit great diversity, making it difficult to offer uniform processing resources. A pilot job architecture, which probes the environment on the remote worker node before pulling down a payload job, can help. Pilot jobs become smart wrappers, preparing an appropriate environment for job execution and providing logging and monitoring capabilities. PanDA (Production and Distributed Analysis), an ATLAS and OSG workload management system, follows this design. However, in the simplest (and most efficient) pilot submission approach of identical pilots carrying the same identifying grid proxy, end-user accounting by the site can only be done with application-level information (PanDA maintains its own end-user accounting), and end-user jobs run with the identity and privileges of the proxy carried by the pilots, which may be seen as a security risk. To address these issues, we have enabled PanDA to use gLExec, a tool provided by EGEE which runs payload jobs under an end-user's identity. End-user proxies are pre-staged in a credential caching service, MyProxy, and the information needed by the pilots to access them is stored in the PanDA DB. gLExec then extracts from the user's proxy the proper identity under which to run. We describe the deployment, installation, and configuration of gLExec, and how PanDA components have been augmented to use it. We describe how difficulties were overcome, and how security risks have been mitigated. Results are presented from OSG and EGEE Grid environments performing ATLAS analysis using PanDA and gLExec.

Recent Improvements in the ATLAS PanDA Pilot

International Nuclear Information System (INIS)

Nilsson, P; De, K; Bejar, J Caballero; Maeno, T; Potekhin, M; Wenaus, T; Compostella, G; Contreras, C; Dos Santos, T

2012-01-01

The Production and Distributed Analysis system (PanDA) in the ATLAS experiment uses pilots to execute submitted jobs on the worker nodes. The pilots are designed to deal with different runtime conditions and failure scenarios, and support many storage systems. This talk will give a brief overview of the PanDA pilot system and will present major features and recent improvements including CernVM File System integration, the job retry mechanism, advanced job monitoring including JEM technology, and validation of new pilot code using the HammerCloud stress-testing system. PanDA is used for all ATLAS distributed production and is the primary system for distributed analysis. It is currently used at over 130 sites worldwide. We analyze the performance of the pilot system in processing LHC data on the OSG, EGI and Nordugrid infrastructures used by ATLAS, and describe plans for its further evolution.

PanDA Beyond ATLAS: Workload Management for Data Intensive Science

CERN Document Server

Schovancova, J; The ATLAS collaboration; Klimentov, A; Maeno, T; Nilsson, P; Oleynik, D; Panitkin, S; Petrosyan, A; Vaniachine, A; Wenaus, T; Yu, D

2013-01-01

The PanDA Production ANd Distributed Analysis system has been developed by ATLAS to meet the experiment's requirements for a data-driven workload management system for production and distributed analysis processing capable of operating at LHC data processing scale. After 7 years of impressively successful PanDA operation in ATLAS there are also other experiments which can benefit from PanDA in the Big Data challenge, with several at various stages of evaluation and adoption. The new project "Next Generation Workload Management and Analysis System for Big Data" is extending PanDA to meet the needs of other data intensive scientific applications in HEP, astro-particle and astrophysics communities, bio-informatics and other fields as a general solution to large scale workload management. PanDA can utilize dedicated or opportunistic computing resources such as grids, clouds, and High Performance Computing facilities, and is being extended to leverage next generation intelligent networks in automated workflow mana...

A PanDA backend for the ganga analysis interface

International Nuclear Information System (INIS)

Vanderster, D C; Elmsheuser, J; Walker, R; Liko, D; Maeno, T; Wenaus, T; Nilsson, P

2010-01-01

Ganga provides a uniform interface for running ATLAS user analyses on a number of local, batch, and grid backends. PanDA is a pilot-based production and distributed analysis system developed and used extensively by ATLAS. This work presents the implementation and usage experiences of a PanDA backend for Ganga. Built upon reusable application libraries from GangaAtlas and PanDA, the Ganga PanDA backend allows users to run their analyses on the worldwide PanDA resources, while providing the ability for users to develop simple or complex analysis workflows in Ganga. Further, the backend allows users to submit and manage 'personal' PanDA pilots: these pilots run under the user's grid certificate and provide a secure alternative to shared pilot certificates while enabling the usage of local resource allocations.

Development of noSQL data storage for the ATLAS PanDA Monitoring System

International Nuclear Information System (INIS)

Potekhin, M

2012-01-01

For several years the PanDA Workload Management System has been the basis for distributed production and analysis for the ATLAS experiment at the LHC. Since the start of data taking PanDA usage has ramped up steadily, typically exceeding 500k completed jobs/day by June 2011. The associated monitoring data volume has been rising as well, to levels that present a new set of challenges in the areas of database scalability and monitoring system performance and efficiency. These challenges are being met with a R and D effort aimed at implementing a scalable and efficient monitoring data storage based on a noSQL solution (Cassandra). We present our motivations for using this technology, as well as data design and the techniques used for efficient indexing of the data. We also discuss the hardware requirements as they were determined by testing with actual data and realistic loads.

Integration Of PanDA Workload Management System With Supercomputers for ATLAS and Data Intensive Science

Science.gov (United States)

Klimentov, A.; De, K.; Jha, S.; Maeno, T.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Wells, J.; Wenaus, T.

2016-10-01

The.LHC, operating at CERN, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 250,000 cores with a peak performance of 0.3 petaFLOPS, LHC data taking runs require more resources than grid can possibly provide. To alleviate these challenges, LHC experiments are engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with supercomputers in United States, in particular with Titan supercomputer at Oak Ridge Leadership Computing Facility. Current approach utilizes modified PanDA pilot framework for job submission to the supercomputers batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on LCFs multi-core worker nodes. This implementation was tested with a variety of Monte-Carlo workloads on several supercomputing platforms for ALICE and ATLAS experiments and it is in full pro duction for the ATLAS since September 2015. We will present our current accomplishments with running PanDA at supercomputers and demonstrate our ability to use PanDA as a portal independent of the

Integration Of PanDA Workload Management System With Supercomputers for ATLAS and Data Intensive Science

International Nuclear Information System (INIS)

Klimentov, A; Maeno, T; Nilsson, P; Panitkin, S; Wenaus, T; De, K; Oleynik, D; Jha, S; Wells, J

2016-01-01

The.LHC, operating at CERN, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 250,000 cores with a peak performance of 0.3 petaFLOPS, LHC data taking runs require more resources than grid can possibly provide. To alleviate these challenges, LHC experiments are engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with supercomputers in United States, in particular with Titan supercomputer at Oak Ridge Leadership Computing Facility. Current approach utilizes modified PanDA pilot framework for job submission to the supercomputers batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on LCFs multi-core worker nodes. This implementation was tested with a variety of Monte-Carlo workloads on several supercomputing platforms for ALICE and ATLAS experiments and it is in full pro duction for the ATLAS since September 2015. We will present our current accomplishments with running PanDA at supercomputers and demonstrate our ability to use PanDA as a portal independent of the

PD2P: PanDA Dynamic Data Placement for ATLAS

International Nuclear Information System (INIS)

Maeno, T; Panitkin, S; De, K

2012-01-01

The PanDA (Production and Distributed Analysis) system plays a key role in the ATLAS distributed computing infrastructure. PanDA is the ATLAS workload management system for processing all Monte-Carlo (MC) simulation and data reprocessing jobs in addition to user and group analysis jobs. The PanDA Dynamic Data Placement (PD2P) system has been developed to cope with difficulties of data placement for ATLAS. We will describe the design of the new system, its performance during the past year of data taking, dramatic improvements it has brought about in the efficient use of storage and processing resources, and plans for the future.

Publics and biobanks: Pan-European diversity and the challenge of responsible innovation.

Science.gov (United States)

Gaskell, George; Gottweis, Herbert; Starkbaum, Johannes; Gerber, Monica M; Broerse, Jacqueline; Gottweis, Ursula; Hobbs, Abbi; Helén, Ilpo; Paschou, Maria; Snell, Karoliina; Soulier, Alexandra

2013-01-01

This article examines public perceptions of biobanks in Europe using a multi-method approach combining quantitative and qualitative data. It is shown that public support for biobanks in Europe is variable and dependent on a range of interconnected factors: people's engagement with biobanks; concerns about privacy and data security, and trust in the socio-political system, key actors and institutions involved in biobanks. We argue that the biobank community needs to acknowledge the impact of these factors if they are to successfully develop and integrate biobanks at a pan-European level.

Next Generation PanDA Pilot for ATLAS and Other Experiments

CERN Document Server

Nilsson, P; The ATLAS collaboration; Caballero Bejar, J; De, K; Hover, J; Love, P; Maeno, T; Medrano Llamas, R; Walker, R; Wenaus, T

2013-01-01

The Production and Distributed Analysis system (PanDA) has been in use in the ATLAS Experiment since 2005. It uses a sophisticated pilot system to execute submitted jobs on the worker nodes. While originally designed for ATLAS, the PanDA Pilot has recently been refactored to facilitate use outside of ATLAS. Experiments are now handled as plug-ins such that a new PanDA Pilot user only has to implement a set of prototyped methods in the plug-in classes, and provide a script that configures and runs the experiment specific payload. We will give an overview of the Next Generation PanDA Pilot system and will present major features and recent improvements including live user payload debugging, data access via the Federated XRootD system, stage-out to alternative storage elements, support for the new ATLAS DDM system (Rucio), and an improved integration with glExec, as well as a description of the experiment specific plug-in classes. The performance of the pilot system in processing LHC data on the OSG, LCG and Nord...

Next Generation PanDA Pilot for ATLAS and Other Experiments

CERN Document Server

Nilsson, P; The ATLAS collaboration; Caballero Bejar, J; De, K; Hover, J; Love, P; Maeno, T; Medrano Llamas, R; Walker, R; Wenaus, T

2014-01-01

The Production and Distributed Analysis system (PanDA) has been in use in the ATLAS Experiment since 2005. It uses a sophisticated pilot system to execute submitted jobs on the worker nodes. While originally designed for ATLAS, the PanDA Pilot has recently been refactored to facilitate use outside of ATLAS. Experiments are now handled as plug-ins such that a new PanDA Pilot user only has to implement a set of prototyped methods in the plug-in classes, and provide a script that configures and runs the experiment specific payload. We will give an overview of the Next Generation PanDA Pilot system and will present major features and recent improvements including live user payload debugging, data access via the Federated XRootD system, stage-out to alternative storage elements, support for the new ATLAS DDM system (Rucio), and an improved integration with glExec, as well as a description of the experiment specific plug-in classes. The performance of the pilot system in processing LHC data on the OSG, LCG and Nord...

Pan-ebolavirus and Pan-filovirus Mouse Monoclonal Antibodies: Protection against Ebola and Sudan Viruses.

Science.gov (United States)

Holtsberg, Frederick W; Shulenin, Sergey; Vu, Hong; Howell, Katie A; Patel, Sonal J; Gunn, Bronwyn; Karim, Marcus; Lai, Jonathan R; Frei, Julia C; Nyakatura, Elisabeth K; Zeitlin, Larry; Douglas, Robin; Fusco, Marnie L; Froude, Jeffrey W; Saphire, Erica Ollmann; Herbert, Andrew S; Wirchnianski, Ariel S; Lear-Rooney, Calli M; Alter, Galit; Dye, John M; Glass, Pamela J; Warfield, Kelly L; Aman, M Javad

2016-01-01

The unprecedented 2014-2015 Ebola virus disease (EVD) outbreak in West Africa has highlighted the need for effective therapeutics against filoviruses. Monoclonal antibody (MAb) cocktails have shown great potential as EVD therapeutics; however, the existing protective MAbs are virus species specific. Here we report the development of pan-ebolavirus and pan-filovirus antibodies generated by repeated immunization of mice with filovirus glycoproteins engineered to drive the B cell responses toward conserved epitopes. Multiple pan-ebolavirus antibodies were identified that react to the Ebola, Sudan, Bundibugyo, and Reston viruses. A pan-filovirus antibody that was reactive to the receptor binding regions of all filovirus glycoproteins was also identified. Significant postexposure efficacy of several MAbs, including a novel antibody cocktail, was demonstrated. For the first time, we report cross-neutralization and in vivo protection against two highly divergent filovirus species, i.e., Ebola virus and Sudan virus, with a single antibody. Competition studies indicate that this antibody targets a previously unrecognized conserved neutralizing epitope that involves the glycan cap. Mechanistic studies indicated that, besides neutralization, innate immune cell effector functions may play a role in the antiviral activity of the antibodies. Our findings further suggest critical novel epitopes that can be utilized to design effective cocktails for broad protection against multiple filovirus species. Filoviruses represent a major public health threat in Africa and an emerging global concern. Largely driven by the U.S. biodefense funding programs and reinforced by the 2014 outbreaks, current immunotherapeutics are primarily focused on a single filovirus species called Ebola virus (EBOV) (formerly Zaire Ebola virus). However, other filoviruses including Sudan, Bundibugyo, and Marburg viruses have caused human outbreaks with mortality rates as high as 90%. Thus, cross

Superficial Velocity Effects on HZ-PAN and AgZ-PAN for Kr/Xe Capture

Energy Technology Data Exchange (ETDEWEB)

Welty, Amy Keil [Idaho National Lab. (INL), Idaho Falls, ID (United States); Garn, Troy Gerry [Idaho National Lab. (INL), Idaho Falls, ID (United States); Greenhalgh, Mitchell Randy [Idaho National Lab. (INL), Idaho Falls, ID (United States)

2016-04-01

Nearly all previous testing of HZ-PAN and AgZ-PAN was conducted at the same flow rate in order to maintain consistency among tests. This testing was sufficient for sorbent capacity determinations, but did not ensure that sorbents were capable of functioning under a range of flow regimes. Tests were conducted on both HZ-PAN and AgZ-PAN at superficial velocities between 20 and 700 cm/min. For HZ-PAN, Kr capacity increased from 60 mmol/kg to 110 mmol/kg as superficial velocity increased from 21 to 679 cm/min. Results for AgZ-PAN were similar, with capacity ranging from 72 to 124 mmol/kg over the same range of superficial. These results are promising for scaling up to process flows, demonstrating flexibility to operate in a broad range of superficial velocities while maintaining sorbent capacity. While preparing for superficial velocity testing it was also discovered that AgZ-PAN Xe capacity, previously observed to diminish over time, could be recovered with increased desorption temperature. Further, a substantial Xe capacity increase was observed. Previous room temperature capacities in the range of 22-25 mmol Xe/kg AgZ-PAN were increased to over 60 mmol Xe/kg AgZ-PAN. While this finding has not yet been fully explored to optimize activation and desorption temperatures, it is encouraging.

PanDA Pilot Submission using Condor-G: Experience and Improvements

CERN Document Server

Zhao, Xin; The ATLAS collaboration; Wlodek, Tom; Wenaus, Torre; Frey, Jaime; Tannenbaum, Todd; Livny, Miron

2010-01-01

PanDA is the workload management system of the ATLAS experiment, used to run production and user analysis jobs on the grid. As a late-binding, pilot-based system, the maintenance of a smooth and steady stream of pilot jobs to all grid sites is critical for PanDA operation. The ATLAS Computing Facility (ACF) at BNL, as the ATLAS Tier 1 center in the US, operates the pilot submission systems for the US. This is done using the PanDA "AutoPilot" scheduler component which submits pilot jobs via Condor-G, a grid job scheduling system developed at the University of Wisconsin-Madison. In this talk, we discuss the operation and performance of the Condor-G pilot submission at BNL, with emphasis on the challenges and issues encountered in the real grid production environment. With the close collaboration of Condor and PanDA teams, the scalability and stability of the overall system has been greatly improved over the last year. We review improvements made to Condor-G resulting from this collaboration, including isolation...

PanDA Pilot Submission using Condor-G: Experience and Improvements

CERN Document Server

Zhao, X; The ATLAS collaboration; Wlodek, T; Wenaus, T; Frey, J; Tannenbaum, T; Livny, M

2011-01-01

PanDA (Production and Distributed Analysis) is the workload management system of the ATLAS experiment, used to run managed production and user analysis jobs on the grid. As a late-binding, pilot-based system, the maintenance of a smooth and steady stream of pilot jobs to all grid sites is critical for PanDA operation. The ATLAS Computing Facility (ACF) at BNL, as the ATLAS Tier1 center in the US, operates the pilot submission systems for the US. This is done using the PanDA “AutoPilot” scheduler component which submits pilot jobs via Condor-G, a grid job scheduling system developed at the University of Wisconsin-Madison. In this paper, we discuss the operation and performance of the Condor-G pilot submission at BNL, with emphasis on the challenges and issues encountered in the real grid production environment. With the close collaboration of Condor and PanDA teams, the scalability and stability of the overall system has been greatly improved over the last year. We review improvements made to Condor-G resu...

Effects of peroxyacetyl nitrate (PAN) on vegetation. I. Herbaceous plants PAN injury symptoms

Energy Technology Data Exchange (ETDEWEB)

Nouchi, I.; Iijima, T.; Oodaira, T.

1975-01-01

A series of exposure experiments were conducted in a controlled-atmosphere exposure chamber equipped with artificial light apparatus, using PAN synthesized from ultraviolet irradiation of ethyl nitrite vapor in oxygen. Exposures of 6 approx. 16 hours and 10 pphm PAN caused serious damage like caving with glazing or bronzing in caved lesions to the lower surface of younger leaves. Leaves of white-flowered petunia were found to be most sensitive to PAN and were damaged even by a 3 pphm exposure. Microscopic examinations showed that the PAN characteristically caused injuries of spongy cells and that these cells collapsed and turned brown. Leaf injury symptoms on herbaceous plants caused by synthesized PAN in the exposure experiments were found to be quite similar to those seen in the field under high oxidant emergence. Therefore, it seems that the said type of injuries to leaf beet, kidney bean, and head lettuce observed in the field were caused by PAN. 21 references. 4 figures, 3 tables.

Building analytical platform with Big Data solutions for log files of PanDA infrastructure

Science.gov (United States)

Alekseev, A. A.; Barreiro Megino, F. G.; Klimentov, A. A.; Korchuganova, T. A.; Maendo, T.; Padolski, S. V.

2018-05-01

The paper describes the implementation of a high-performance system for the processing and analysis of log files for the PanDA infrastructure of the ATLAS experiment at the Large Hadron Collider (LHC), responsible for the workload management of order of 2M daily jobs across the Worldwide LHC Computing Grid. The solution is based on the ELK technology stack, which includes several components: Filebeat, Logstash, ElasticSearch (ES), and Kibana. Filebeat is used to collect data from logs. Logstash processes data and export to Elasticsearch. ES are responsible for centralized data storage. Accumulated data in ES can be viewed using a special software Kibana. These components were integrated with the PanDA infrastructure and replaced previous log processing systems for increased scalability and usability. The authors will describe all the components and their configuration tuning for the current tasks, the scale of the actual system and give several real-life examples of how this centralized log processing and storage service is used to showcase the advantages for daily operations.

Analysis list: pan [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available pan Embryo,Larvae,Pupae + dm3 http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/target.../pan.1.tsv http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/target/pan.5.tsv http://dbarchive.biosciencedbc.jp.../kyushu-u/dm3/target/pan.10.tsv http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/colo/pan.Embryo.tsv,http://dbarchive.bioscience...dbc.jp/kyushu-u/dm3/colo/pan.Larvae.tsv,http://dbarchive.bioscience...dbc.jp/kyushu-u/dm3/colo/pan.Pupae.tsv http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/colo/Embryo.gml,http://dbarchive.bioscience

PanDA Pilot Submission using Condor-G: Experience and Improvements

International Nuclear Information System (INIS)

Zhao Xin; Hover, John; Wlodek, Tomasz; Wenaus, Torre; Frey, Jaime; Tannenbaum, Todd; Livny, Miron

2011-01-01

PanDA (Production and Distributed Analysis) is the workload management system of the ATLAS experiment, used to run managed production and user analysis jobs on the grid. As a late-binding, pilot-based system, the maintenance of a smooth and steady stream of pilot jobs to all grid sites is critical for PanDA operation. The ATLAS Computing Facility (ACF) at BNL, as the ATLAS Tier1 center in the US, operates the pilot submission systems for the US. This is done using the PanDA 'AutoPilot' scheduler component which submits pilot jobs via Condor-G, a grid job scheduling system developed at the University of Wisconsin-Madison. In this paper, we discuss the operation and performance of the Condor-G pilot submission at BNL, with emphasis on the challenges and issues encountered in the real grid production environment. With the close collaboration of Condor and PanDA teams, the scalability and stability of the overall system has been greatly improved over the last year. We review improvements made to Condor-G resulting from this collaboration, including isolation of site-based issues by running a separate Gridmanager for each remote site, introduction of the 'Nonessential' job attribute to allow Condor to optimize its behavior for the specific character of pilot jobs, better understanding and handling of the Gridmonitor process, as well as better scheduling in the PanDA pilot scheduler component. We will also cover the monitoring of the health of the system.

Next generation PanDA pilot for ATLAS and other experiments

International Nuclear Information System (INIS)

Nilsson, P; De, K; Megino, F Barreiro; Llamas, R Medrano; Bejar, J Caballero; Hover, J; Maeno, T; Wenaus, T; Love, P; Walker, R

2014-01-01

The Production and Distributed Analysis system (PanDA) has been in use in the ATLAS Experiment since 2005. It uses a sophisticated pilot system to execute submitted jobs on the worker nodes. While originally designed for ATLAS, the PanDA Pilot has recently been refactored to facilitate use outside of ATLAS. Experiments are now handled as plug-ins such that a new PanDA Pilot user only has to implement a set of prototyped methods in the plug-in classes, and provide a script that configures and runs the experiment-specific payload. We will give an overview of the Next Generation PanDA Pilot system and will present major features and recent improvements including live user payload debugging, data access via the Federated XRootD system, stage-out to alternative storage elements, support for the new ATLAS DDM system (Rucio), and an improved integration with glExec, as well as a description of the experiment-specific plug-in classes. The performance of the pilot system in processing LHC data on the OSG, LCG and Nordugrid infrastructures used by ATLAS will also be presented. We will describe plans for future development on the time scale of the next few years.

Integration of Globus Online with the ATLAS PanDA Workload Management System

CERN Document Server

Contreras, C; The ATLAS collaboration; Maeno, T; Nilsson, P; Potekhin, M

2012-01-01

The PanDA Workload Management System is the basis for distributed production and analysis for the ATLAS experiment at the LHC. In this role, it relies on sophisticated dynamic data movement facilities developed in ATLAS. In certain scenarios, such as small research teams in ATLAS Tier-3 sites and non-ATLAS Virtual Organizations, the overhead of installation and operation of these components makes their use not very cost effective. Globus Online is an emerging new tool from the Globus Alliance, which already proved popular within the research community. It provides the users with fast and robust file transfer capabilities that can also be managed from a Web interface, and in addition to grid sites, can have individual workstations and laptops serving as data transmission endpoints. We will describe the integration of the Globus Online functionality into the PanDA suite of software, in order to give more flexibility in choosing the method of data transfer to ATLAS Tier-3 and OSG users.

Integration of Globus Online with the ATLAS PanDA Workload Management System

International Nuclear Information System (INIS)

Contreras, C; Deng, W; Maeno, T; Potekhin, M; Nilsson, P

2012-01-01

The PanDA Workload Management System is the basis for distributed production and analysis for the ATLAS experiment at the LHC. In this role, it relies on sophisticated dynamic data movement facilities developed in ATLAS. In certain scenarios, such as small research teams in ATLAS Tier-3 sites and non-ATLAS Virtual Organizations, the overhead of installation and operation of these components makes their use not very cost effective. Globus Online is an emerging new tool from the Globus Alliance, which already proved popular within the research community. It provides the users with fast and robust file transfer capabilities that can also be managed from a Web interface, and in addition to grid sites, can have individual workstations and laptops serving as data transmission endpoints. We will describe the integration of the Globus Online functionality into the PanDA suite of software, in order to give more flexibility in choosing the method of data transfer to ATLAS Tier-3 and Open Science Grid (OSG) users.

Development of noSQL data storage for the ATLAS PanDA Monitoring System

International Nuclear Information System (INIS)

Ito, H; Potekhin, M; Wenaus, T

2012-01-01

For several years the PanDA Workload Management System has been the basis for distributed production and analysis for the ATLAS experiment at the LHC. Since the start of data taking PanDA usage has ramped up steadily, typically exceeding 500k completed jobs/day by June 2011. The associated monitoring data volume has been rising as well, to levels that present a new set of challenges in the areas of database scalability and monitoring system performance and efficiency. These challenges are being met with an R and D effort aimed at implementing a scalable and efficient monitoring data storage based on a noSQL solution (Cassandra). We present our motivations for using this technology, as well as data design and the techniques used for efficient indexing of the data. We also discuss the hardware requirements as they were determined by testing with actual data and realistic rate of queries. In conclusion, we present our experience with operating a Cassandra cluster over an extended period of time and with data load adequate for planned application.

Development of noSQL data storage for the ATLAS PanDA Monitoring System

Science.gov (United States)

Ito, H.; Potekhin, M.; Wenaus, T.

2012-12-01

For several years the PanDA Workload Management System has been the basis for distributed production and analysis for the ATLAS experiment at the LHC. Since the start of data taking PanDA usage has ramped up steadily, typically exceeding 500k completed jobs/day by June 2011. The associated monitoring data volume has been rising as well, to levels that present a new set of challenges in the areas of database scalability and monitoring system performance and efficiency. These challenges are being met with an R&D effort aimed at implementing a scalable and efficient monitoring data storage based on a noSQL solution (Cassandra). We present our motivations for using this technology, as well as data design and the techniques used for efficient indexing of the data. We also discuss the hardware requirements as they were determined by testing with actual data and realistic rate of queries. In conclusion, we present our experience with operating a Cassandra cluster over an extended period of time and with data load adequate for planned application.

Transformation of Pan-STARRS1 gri to Stetson BVRI magnitudes. Photometry of small bodies observations.

Science.gov (United States)

Kostov, A.; Bonev, T.

2018-02-01

The UBVRI broad band photometric system is widely used in CCD astronomy. There are a lot of sets of standard stars for this photometric system, the Landolt's and Stetson's catalogues being the most precise and reliable. Another photometric system, recently considerably spread in CCD observations is ugriz, which originates from the Sloan Digital Sky Survey (SDSS) and has now many variations based on its 5 broad-band filters. One of the photometric systems based on it is The Panoramic Survey Telescope and Rapid Response System (Pan-STARRS). In this paper we compare the BVRI magnitudes in the Stetson catalogue of standard stars with the magnitudes of the corresponding stars in the Pan-STARRS1 (PS1) grizyw catalogue. Transformations between these two systems are presented and discussed. An algorithm for data reduction and calibration is developed and its functionality is demonstrated in the magnitude determination of an asteroid.

The Future of PanDA in ATLAS Distributed Computing

CERN Document Server

De, Kaushik; The ATLAS collaboration; Maeno, Tadashi; Nilsson, Paul; Oleynik, Danila; Panitkin, Sergey; Petrosyan, Artem; Schovancova, Jaroslava; Vaniachine, Alexandre; Wenaus, Torre

2015-01-01

Experiments at the Large Hadron Collider (LHC) face unprecedented computing challenges. Heterogeneous resources are distributed worldwide at hundreds of sites, thousands of physicists analyze the data remotely, the volume of processed data is beyond the exabyte scale, while data processing requires more than a few billion hours of computing usage per year. The PanDA (Production and Distributed Analysis) system was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. In the process, the old batch job paradigm of locally managed computing in HEP was discarded in favor of a far more automated, flexible and scalable model. The success of PanDA in ATLAS is leading to widespread adoption and testing by other experiments. PanDA is the first exascale workload management system in HEP, already operating at more than a million computing jobs per day, and processing over an exabyte of data in 2013. There are many new challenges that PanDA will face in the near future, in addi...

PanDA for COMPASS at JINR

Science.gov (United States)

Petrosyan, A. Sh.

2016-09-01

PanDA (Production and Distributed Analysis System) is a workload management system, widely used for data processing at experiments on Large Hadron Collider and others. COMPASS is a high-energy physics experiment at the Super Proton Synchrotron. Data processing for COMPASS runs locally at CERN, on lxbatch, the data itself stored in CASTOR. In 2014 an idea to start running COMPASS production through PanDA arose. Such transformation in experiment's data processing will allow COMPASS community to use not only CERN resources, but also Grid resources worldwide. During the spring and summer of 2015 installation, validation and migration work is being performed at JINR. Details and results of this process are presented in this paper.

Uncertainty analysis of the SWEPP PAN assay system for glass waste (content codes 440, 441 and 442)

International Nuclear Information System (INIS)

Blackwood, L.G.; Harker, Y.D.; Meachum, T.R.; Yoon, W.Y.

1996-10-01

INEL is being used as a temporary storage facility for transuranic waste generated by the Nuclear Weapons program at the Rocky Flats Plant. Currently, there is a large effort in progress to prepare to ship this waste to WIPP. In order to meet the TRU Waste Characterization Quality Assurance Program Plan nondestructive assay compliance requirements and quality assurance objectives, it is necessary to determine the total uncertainty of the radioassay results produced by the Stored Waste Examination Pilot Plant (SWEPP) Passive Action Neutron (PAN) radioassay system. This paper discusses a modified statistical sampling and verification approach used to determine the total uncertainty of SWEPP PAN measurements for glass waste (content codes 440, 441, and 442) contained in 208 liter drums. In the modified statistical sampling and verification approach, the total performance of the SWEPP PAN nondestructive assay system for specifically selected waste conditions is simulated using computer models. A set of 100 cases covering the known conditions exhibited in glass waste was compiled using a combined statistical sampling and factorial experimental design approach. Parameter values assigned in each simulation were derived from reviews of approximately 100 real-time radiography video tapes of RFP glass waste drums, results from previous SWEPP PAN measurements on glass waste drums, and shipping data from RFP where the glass waste was generated. The data in the 100 selected cases form the multi-parameter input to the simulation model. The reported plutonium masses from the simulation model are compared with corresponding input masses. From these comparisons, the bias and total uncertainty associated with SWEPP PAN measurements on glass waste drums are estimated. The validity of the simulation approach is verified by comparing simulated output against results from calibration measurements using known plutonium sources and two glass waste calibration drums

Uncertainty analysis of the SWEPP PAN assay system for glass waste (content codes 440, 441 and 442)

Energy Technology Data Exchange (ETDEWEB)

Blackwood, L.G.; Harker, Y.D.; Meachum, T.R.; Yoon, W.Y.

1996-10-01

INEL is being used as a temporary storage facility for transuranic waste generated by the Nuclear Weapons program at the Rocky Flats Plant. Currently, there is a large effort in progress to prepare to ship this waste to WIPP. In order to meet the TRU Waste Characterization Quality Assurance Program Plan nondestructive assay compliance requirements and quality assurance objectives, it is necessary to determine the total uncertainty of the radioassay results produced by the Stored Waste Examination Pilot Plant (SWEPP) Passive Action Neutron (PAN) radioassay system. This paper discusses a modified statistical sampling and verification approach used to determine the total uncertainty of SWEPP PAN measurements for glass waste (content codes 440, 441, and 442) contained in 208 liter drums. In the modified statistical sampling and verification approach, the total performance of the SWEPP PAN nondestructive assay system for specifically selected waste conditions is simulated using computer models. A set of 100 cases covering the known conditions exhibited in glass waste was compiled using a combined statistical sampling and factorial experimental design approach. Parameter values assigned in each simulation were derived from reviews of approximately 100 real-time radiography video tapes of RFP glass waste drums, results from previous SWEPP PAN measurements on glass waste drums, and shipping data from RFP where the glass waste was generated. The data in the 100 selected cases form the multi-parameter input to the simulation model. The reported plutonium masses from the simulation model are compared with corresponding input masses. From these comparisons, the bias and total uncertainty associated with SWEPP PAN measurements on glass waste drums are estimated. The validity of the simulation approach is verified by comparing simulated output against results from calibration measurements using known plutonium sources and two glass waste calibration drums.

Integration Of PanDA Workload Management System With Supercomputers for ATLAS and Data Intensive Science

Energy Technology Data Exchange (ETDEWEB)

De, K [University of Texas at Arlington; Jha, S [Rutgers University; Klimentov, A [Brookhaven National Laboratory (BNL); Maeno, T [Brookhaven National Laboratory (BNL); Nilsson, P [Brookhaven National Laboratory (BNL); Oleynik, D [University of Texas at Arlington; Panitkin, S [Brookhaven National Laboratory (BNL); Wells, Jack C [ORNL; Wenaus, T [Brookhaven National Laboratory (BNL)

2016-01-01

The Large Hadron Collider (LHC), operating at the international CERN Laboratory in Geneva, Switzerland, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe, and were recently credited for the discovery of a Higgs boson. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 250,000 cores with a peak performance of 0.3 petaFLOPS, LHC data taking runs require more resources than Grid computing can possibly provide. To alleviate these challenges, LHC experiments are engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with supercomputers in United States, Europe and Russia (in particular with Titan supercomputer at Oak Ridge Leadership Computing Facility (OLCF), MIRA supercomputer at Argonne Leadership Computing Facilities (ALCF), Supercomputer at the National Research Center Kurchatov Institute , IT4 in Ostrava and others). Current approach utilizes modified PanDA pilot framework for job submission to the supercomputers batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on LCFs multi-core worker nodes. This implementation

HOW TO PAN-SHARPEN IMAGES USING THE GRAM-SCHMIDT PAN-SHARPEN METHOD – A RECIPE

Directory of Open Access Journals (Sweden)

T. Maurer

2013-05-01

Full Text Available Since its publication in 1998 (Laben and Brower, 2000, the Gram-Schmidt pan-sharpen method has become one of the most popular algorithms to pan-sharpen multispectral (MS imagery. It outperforms most other pan-sharpen methods in both maximizing image sharpness and minimizing color distortion. It is, on the other hand, also more complex and computationally expensive than most other methods, as it requires forward and backward transforming the entire image. Another complication is the lack of a clear recipe of how to compute the sensor dependent MS to Pan weights that are needed to compute the simulated low resolution pan band. Estimating them from the sensor’s spectral sensitivity curves (in different ways, or using linear regression or least square methods are typical candidates which can include other degrees of freedom such as adding a constant offset or not. As a result, most companies and data providers do it somewhat differently. Here we present a solution to both problems. The transform coefficients can be computed directly and in advance from the MS covariance matrix and the MS to Pan weights. Once the MS covariance matrix is computed and stored with the image statistics, any small section of the image can be pan-sharpened on the fly, without having to compute anything else over the entire image. Similarly, optimal MS to Pan weights can be computed directly from the full MS-Pan covariance matrix, guaranteeing optimal image quality and consistency.

A study on the applicability of Recommender Systems for the Production and Distributed Analysis system PanDA of the ATLAS Experiment

CERN Document Server

Titov, Mikhail; The ATLAS collaboration; De, Kaushik; Klimentov, Alexei

2017-01-01

Scientific computing has advanced in a way of how to deal with massive amounts of data, since the production capacities have increased significantly for the last decades. Most large science experiments require vast computing and data storage resources in order to provide results or predictions based on the data obtained. For scientific distributed computing systems with hundreds of petabytes of data and thousands of users it is important to keep track not just of how data is distributed in the system, but also of individual user's interests in the distributed data (reveal implicit interconnection between user and data objects). This however requires the collection and use of specific statistics such as correlations between data distribution, the mechanics of data distribution, and mainly user preferences. This work focuses on user activities (specifically, data usages) and interests in such a distributed computing system, namely PanDA (Production ANd Distributed Analysis system). PanDA is a high-performance w...

A study of the applicability of recommender systems for the Production and Distributed Analysis system PanDA of the ATLAS Experiment

CERN Document Server

Titov, Mikhail; The ATLAS collaboration

2017-01-01

Scientific computing has advanced in a way of how to deal with massive amounts of data, since the production capacities have increased significantly for the last decades. Most large science experiments require vast computing and data storage resources in order to provide results or predictions based on the data obtained. For scientific distributed computing systems with hundreds of petabytes of data and thousands of users it is important to keep track not just of how data is distributed in the system, but also of individual user's interests in the distributed data (reveal implicit interconnection between user and data objects). This however requires the collection and use of specific statistics such as correlations between data distribution, the mechanics of data distribution, and mainly user preferences. This work focuses on user activities (specifically, data usages) and interests in such a distributed computing system, namely PanDA (Production ANd Distributed Analysis system). PanDA is a high-performance w...

O pan das ánimas

OpenAIRE

Antón, Fina; Mandianes Castro, Manuel

1996-01-01

O pan, ademais de cumprir una función alimenticia de primeira orde, está revestido dunha significación simbólica importante. O pan durante a vida axuda a pasa-los límites, a da-lo paso, a integrarse entre os cristiáns por cousa do bautismo e a integrarse no grupo dos homes e mulleres co adaxo da boda, pero o pan axuda, sobre todo, a pasa-lo río Xordán, que é, sen dúbida o límite que separa este mundo do outro; a serpe e as ánimas constitúen un límite e o pan facilita o seu paso. O pan está in...

Searching for Solar System Wide Binaries with Pan-STARRS-1

Science.gov (United States)

Holman, Matthew J.; Protopapas, P.; Tholen, D. J.

2007-10-01

Roughly 60% of the observing time of the Pan-STARRS-1 (PS1) telescope will be dedicated to a "3pi steradian" survey with an observing cadence that is designed for the detection of near-Earth asteroids and slow-moving solar system bodies. Over this course of its 3.5 year cience mission, this unprecedented survey will discover nearly every asteroid, Trojan, Centaur, long-period comet, short-period comet, and trans-neptunian object (TNO) brighter than magnitude R=23. This census will be used to address a large number of questions regarding the physical and dynamical properties of the various small body populations of the solar system. Roughly 1-2% of TNOs are wide binaries with companions at separations greater than 1 arcsec and brightness differences less than 2 magnitudes (Kern & Elliot 2006; Noll et al 2007). These can be readily detected by PS1; we will carry out such a search with PS1 data. To do so, we will modify the Pan-STARRS Moving Object Processing System (MOPS) such that it will associate the components of resolved or marginally resolved binaries, link such pairs of detections obtained at different epochs, and the estimate the relative orbit of the binary. We will also determine the efficiency with which such binaries are detected as a function of the binary's relative orbit and the relative magnitudes of the components. Based on an estimated 7000 TNOs that PS1 will discover, we anticipate finding 70-140 wide binaries. The PS1 data, 60 epochs over three years, is naturally suited to determining the orbits of these objects. Our search will accurately determine the binary fraction for a variety of subclasses of TNOs.

Applying Big Data solutions for log analytics in the PanDA infrastructure

CERN Document Server

Alekseev, Aleksandr; The ATLAS collaboration

2017-01-01

PanDA is the workflow management system of the ATLAS experiment at the LHC and is responsible for generating, brokering and monitoring up to two million jobs per day across 150 computing centers in the Worldwide LHC Computing Grid. The PanDA core consists of several components deployed centrally on around 20 servers. The daily log volume is around 400GB per day. In certain cases, troubleshooting a particular issue on the raw log files can be compared to searching for a needle in a haystack and requires a high level of expertise. Therefore we decided to build on trending Big Data solutions and utilize the ELK infrastructure (Filebeat, Logstash, Elastic Search and Kibana) to process, index and analyze our log files. This allows to overcome troubleshooting complexity, provides a better interface to the operations team and generates advanced analytics to understand our system. This paper will describe the features of the ELK stack, our infrastructure, optimal configuration settings and filters. We will provide ex...

Optimizing new components of PanDA for ATLAS production on HPC resources

CERN Document Server

Maeno, Tadashi; The ATLAS collaboration

2017-01-01

The Production and Distributed Analysis system (PanDA) has been used for workload management in the ATLAS Experiment for over a decade. It uses pilots to retrieve jobs from the PanDA server and execute them on worker nodes. While PanDA has been mostly used on Worldwide LHC Computing Grid (WLCG) resources for production operations, R&D work has been ongoing on cloud and HPC resources for many years. These efforts have led to the significant usage of large scale HPC resources in the past couple of years. In this talk we will describe the changes to the pilot which enabled the use of HPC sites by PanDA, specifically the Titan supercomputer at Oakridge National Laboratory. Furthermore, it was decided in 2016 to start a fresh redesign of the Pilot with a more modern approach to better serve present and future needs from ATLAS and other collaborations that are interested in using the PanDA System. Another new project for development of a resource oriented service, PanDA Harvester, was also launched in 2016. The...

Electrically controllable artificial PAN muscles

Science.gov (United States)

Salehpoor, Karim; Shahinpoor, Mohsen; Mojarrad, Mehran

1996-02-01

Artificial muscles made with polyacrylonitrile (PAN) fibers are traditionally activated in electrolytic solution by changing the pH of the solution by the addition of acids and/or bases. This usually consumes a considerable amount of weak acids or bases. Furthermore, the synthetic muscle (PAN) itself has to be impregnated with an acid or a base and must have an appropriate enclosure or provision for waste collection after actuation. This work introduces a method by which the PAN muscle may be elongated or contracted in an electric field. We believe this is the first time that this has been achieved with PAN fibers as artificial muscles. In this new development the PAN muscle is first put in close contact with one of the two platinum wires (electrodes) immersed in an aqueous solution of sodium chloride. Applying an electric voltage between the two wires changes the local acidity of the solution in the regions close to the platinum wires. This is because of the ionization of sodium chloride molecules and the accumulation of Na+ and Cl- ions at the negative and positive electrode sites, respectively. This ion accumulation, in turn, is accompanied by a sharp increase and decrease of the local acidity in regions close to either of the platinum wires, respectively. An artificial muscle, in close contact with the platinum wire, because of the change in the local acidity will contract or expand depending on the polarity of the electric field. This scheme allows the experimenter to use a fixed flexible container of an electrolytic solution whose local pH can be modulated by an imposed electric field while the produced ions are basically trapped to stay in the neighborhood of a given electrode. This method of artificial muscle activation has several advantages. First, the need to use a large quantity of acidic or alkaline solutions is eliminated. Second, the use of a compact PAN muscular system is facilitated for applications in active musculoskeletal structures. Third, the

The future of PanDA in ATLAS distributed computing

Science.gov (United States)

De, K.; Klimentov, A.; Maeno, T.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.

2015-12-01

Experiments at the Large Hadron Collider (LHC) face unprecedented computing challenges. Heterogeneous resources are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, while data processing requires more than a few billion hours of computing usage per year. The PanDA (Production and Distributed Analysis) system was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. In the process, the old batch job paradigm of locally managed computing in HEP was discarded in favour of a far more automated, flexible and scalable model. The success of PanDA in ATLAS is leading to widespread adoption and testing by other experiments. PanDA is the first exascale workload management system in HEP, already operating at more than a million computing jobs per day, and processing over an exabyte of data in 2013. There are many new challenges that PanDA will face in the near future, in addition to new challenges of scale, heterogeneity and increasing user base. PanDA will need to handle rapidly changing computing infrastructure, will require factorization of code for easier deployment, will need to incorporate additional information sources including network metrics in decision making, be able to control network circuits, handle dynamically sized workload processing, provide improved visualization, and face many other challenges. In this talk we will focus on the new features, planned or recently implemented, that are relevant to the next decade of distributed computing workload management using PanDA.

The Consolidation on Banking Supervision in the Context of a Pan European Banking System

OpenAIRE

Teodora Barbu; Georgeta Vintila

2007-01-01

The diversity of national banking systems in the European banking system and the absence of consolidated supervision creates the premises for a series of interrogations whose essence is the same: Is it possible to discuss about a Pan European Banking System? The starting point in answering this question was the efforts to create a single banking market, which took place in 1973-1999, and the impact of integration on the European Banking Industry. Among the most representative aspects, it must...

Foliar injury response of petunia and kidney bean to simultaneous and alternate exposures to ozone and PAN

Energy Technology Data Exchange (ETDEWEB)

Nouchi, I.; Mayumi, H.; Yamazoe, F.

1984-01-01

Petunia at about 6 weeks old and kidney bean at two growing stages (6-7 days old and 16-18 days old) were exposed separately to O/sub 3/ (0-0.40 ppm) and PAN (0-0.25 ppm) for 4 h and to the mixture for the same time. In addition, petunia was exposed to O/sub 3/ (0.10-0.40 ppm) and then PAN (0.010-0.040 ppm) for 4 h, respectively. Foliar injury of petunia and kidney bean in exposures to the mixtures of O/sub 3/ and PAN was significantly smaller than that induced by each oxidant, with the exception of PAN injury on young leaves of 16-18 day-old kidney bean. The percentage of foliar injury caused by either of the mixed pollutants decreased with an increase of the concentration of the other oxidant, and was found to approximate a logarithmic function of the combined pollutant concentrations expressed as O/sub 3/ minum PAN or vice versa. Alternate exposures caused no additive or synergistic injuries. 23 references, 3 figures, 6 tables.

Foliar injury response of petunia and kidney bean to simultaneous and alternate exposures to ozone and pan

Science.gov (United States)

Nouchi, Isamu; Mayumi, Hirokazu; Yamazoe, Fumio

Petunia at about 6 weeks old and kidney bean at two growing stages (6-7 days old and 16-18 days old) were exposed separately to O 3, (0-0.40 ppm) and PAN (0-0.25 ppm) for 4 h and to the mixture for the same time. In addition, petunia was exposed to O, (0.10-0.40 ppm) and then PAN (0.010-0.040 ppm) for 4 h, respectively. Foliar injury of petunia and kidney bean in exposures to the mixtures of O 3 and PAN was significantly smaller than that induced by each oxidant, with the exception of PAN injury on young leaves of 16-18 day-old kidney bean. The percentage of foliar injury caused by either of the mixed pollutants decreased with an increase of the concentration of the other oxidant, and was found to approximate a logarithmic function of the combined pollutant concentrations expressed as O 3, minum PAN or vice versa. Alternate exposures caused no additive or synergistic injuries.

The Impact of a Pan-regional Inclusive Trauma System on Quality of Care.

Science.gov (United States)

Cole, Elaine; Lecky, Fiona; West, Anita; Smith, Neil; Brohi, Karim; Davenport, Ross

2016-07-01

To evaluate the impact of the implementation of an inclusive pan-regional trauma system on quality of care. Inclusive trauma systems ensure access to quality injury care for a designated population. The 2007 National Confidential Enquiry into Patient Outcome and Death (NCEPOD) found quality deficits for 60% of severely injured patients. In 2010, London implemented an inclusive trauma system. This represented an opportunity to evaluate the impact of a pan-regional trauma system on quality of care. Evaluation of the London Trauma System (ELoTS) utilized the NCEPOD study core methodology. Severely injured patients were identified prospectively over a 3-month period. Data were collected from prehospital care to 72 h following admission or death. Quality, processes of care, and outcome were assessed by expert review using NCEPOD criteria. Three hundred and twenty one severely injured patients were included of which 84% were taken directly to a major trauma center, in contrast to 16% in NCEPOD. Overall quality improved with the proportion of patients receiving "good overall care" increasing significantly [NCEPOD: 48% vs ALL-ELoTS: 69%, RR 1.3 (1.2 to 1.4), P < 0.01], primarily through improvements in organizational processes rather than clinical care. Improved quality was associated with increased early survival, with the greatest benefit for critically injured patients [NCEPOD: 31% vs All-ELoTS 11%, RR 0.37 (0.33 to 0.99), P = 0.04]. Inclusive trauma systems deliver quality and process improvements, primarily through organizational change. Most improvements were seen in major trauma centers; however, systems implementation did not automatically lead to a reduction in clinical deficits in care.

Development of a pan-Simbu real-time reverse transcriptase PCR for the detection of Simbu serogroup viruses and comparison with SBV diagnostic PCR systems.

Science.gov (United States)

Fischer, Melina; Schirrmeier, Horst; Wernike, Kerstin; Wegelt, Anne; Beer, Martin; Hoffmann, Bernd

2013-11-05

Schmallenberg virus (SBV), a novel orthobunyavirus of the Simbu serogroup, was first identified in October 2011 in dairy cattle in Germany, where it caused fever, diarrhea and a drop in milk yield. Since then, SBV additionally has been detected in adult sheep and goats. Although symptoms of acute infection were not observed, infection during a vulnerable phase of pregnancy caused congenital malformations and stillbirths. In view of the current situation and the possible emergence of further Simbu serogroup members, a pan-Simbu real-time reverse transcriptase (RT) PCR system for the reliable detection of Simbu serogroup viruses should be developed. In this study a pan-Simbu real-time RT-PCR system was established and compared to several SBV real-time RT-PCR assays. All PCR-systems were tested using a panel of different Simbu serogroup viruses as well as several field samples from diseased cattle, sheep and goats originating from all over Germany. Several pan-Simbu real-time RT-PCR products were sequenced via Sanger sequencing. Furthermore, in silico analyses were performed to investigate suitability for the detection of further orthobunyaviruses. All tested members of the Simbu serogroup (n = 14) as well as most of the field samples were successfully detected by the pan-Simbu real-time RT-PCR system. The comparison of this intercalating dye assay with different TaqMan probe-based assays developed for SBV diagnostics confirmed the functionality of the pan-Simbu assay for screening purposes. However, the SBV-TaqMan-assay SBV-S3 delivered the highest analytical sensitivity of less than ten copies per reaction for duplex systems including an internal control. In addition, for confirmation of SBV-genome detection the highly specific SBV-M1 assay was established. The pan-Simbu real-time RT-PCR system was able to detect all tested members of the Simbu serogroup, most of the SBV field samples as well as three tested Bunyamwera serogroup viruses with a suitable

Inter- and Intraspecific Variations in the Pectoral Muscles of Common Chimpanzees (Pan troglodytes), Bonobos (Pan paniscus), and Humans (Homo sapiens).

Science.gov (United States)

Potau, J M; Arias-Martorell, J; Bello-Hellegouarch, G; Casado, A; Pastor, J F; de Paz, F; Diogo, R

2018-01-01

We have analyzed anatomic variations in the pectoralis major and pectoralis minor muscles of common chimpanzees (Pan troglodytes) and bonobos (Pan paniscus) and compared them to anatomic variations in these muscles in humans (Homo sapiens) . We have macroscopically dissected these muscles in six adult Pan troglodytes , five Pan paniscus of ages ranging from fetus to adult, and five adult Homo sapiens . Although Pan troglodytes are thought to lack a separate pectoralis abdominis muscle, we have identified this muscle in three of the Pan troglodytes ; none of the Pan paniscus , however, had this muscle. We have also found deep supernumerary fascicles in the pectoralis major of two Pan troglodytes and all five Pan paniscus . In all six Pan troglodytes , the pectoralis minor was inserted at the supraspinatus tendon, while, in Pan paniscus and Homo sapiens , it was inserted at the coracoid process of the scapula. Some of the anatomic features and variations of these muscles in common chimpanzees and bonobos are similar to those found in humans, therefore enhancing our knowledge of primate comparative anatomy and evolution and also shedding light on several clinical issues.

Inter- and Intraspecific Variations in the Pectoral Muscles of Common Chimpanzees (Pan troglodytes, Bonobos (Pan paniscus, and Humans (Homo sapiens

Directory of Open Access Journals (Sweden)

J. M. Potau

2018-01-01

Full Text Available We have analyzed anatomic variations in the pectoralis major and pectoralis minor muscles of common chimpanzees (Pan troglodytes and bonobos (Pan paniscus and compared them to anatomic variations in these muscles in humans (Homo sapiens. We have macroscopically dissected these muscles in six adult Pan troglodytes, five Pan paniscus of ages ranging from fetus to adult, and five adult Homo sapiens. Although Pan troglodytes are thought to lack a separate pectoralis abdominis muscle, we have identified this muscle in three of the Pan troglodytes; none of the Pan paniscus, however, had this muscle. We have also found deep supernumerary fascicles in the pectoralis major of two Pan troglodytes and all five Pan paniscus. In all six Pan troglodytes, the pectoralis minor was inserted at the supraspinatus tendon, while, in Pan paniscus and Homo sapiens, it was inserted at the coracoid process of the scapula. Some of the anatomic features and variations of these muscles in common chimpanzees and bonobos are similar to those found in humans, therefore enhancing our knowledge of primate comparative anatomy and evolution and also shedding light on several clinical issues.

PAN-DA and beyond: Data acquisition for the next generation experiments

International Nuclear Information System (INIS)

Pordes, R.; Anderson, J.; Berg, D.; Berman, E.; Brown, D.; Dorries, T.; Mackinnon, B.; Meadows, J.; Moore, C.; Nicinski, T.; Oleynik, G.; Petravick, D.; Rechenmacher, R.; Sergey, G.; Slimmer, D.; Streets, J.; Vittone, M.; Votava, M.; Wilcer, N.; White, V.

1991-06-01

We report on the status of the PAN-DA data acquisition system presented at the last Real Time Conference. Since that time, PAN-DA has been successfully used in the fixed target program at Fermilab. We also report on the plans and strategies for development of a new data acquisition system for the next generation of fixed target experiments at Fermilab. 10 refs., 3 figs

The next generation PanDA Pilot for and beyond the ATLAS experiment

CERN Document Server

Nilsson, Paul; The ATLAS collaboration

2018-01-01

The Production and Distributed Analysis system (PanDA) is a pilot-based workload management system that was originally designed for the ATLAS Experiment at the LHC to operate on grid sites. Since the coming LHC data taking runs will require more resources than grid computing alone can provide, the various LHC experiments are engaged in an ambitious program to extend the computing model to include opportunistically used resources such as High Performance Computers (HPCs), clouds and volunteer computers. To this end, PanDA is being extended beyond grids and ATLAS to be used on the new types of resources as well as by other experiments. A new key component is being developed, the next generation PanDA Pilot (Pilot 2). Pilot 2 is a complete rewrite of the original PanDA Pilot which has been used in the ATLAS Experiment for over a decade. The new Pilot architecture follows a component-based approach which improves system flexibility, enables a clear workflow control, evolves the system according to modern function...

PD2P : PanDA Dynamic Data Placement for ATLAS

CERN Multimedia

CERN. Geneva

2012-01-01

The PanDA Dynamic Data Placement (PD2P) system has been developed to cope with difficulties of data placement for ATLAS. PD2P is an intelligent subsystem of PanDA to distribute data by taking the following factors into account: popularity, locality, the usage pattern of the data, the distribution of CPU and storage resources, ...

Simplified pilot module development and testing within the ATLAS PanDA Pilot 2.0 Project

CERN Document Server

Drizhuk, Daniil; The ATLAS collaboration; Nilsson, Paul

2016-01-01

The Production and Distributed Analysis (PanDA) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at the LHC data processing scale. The PanDA pilot is one of the major components in the PanDA system. It runs on a worker node and takes care of setting up the environment, fetching and pushing data to storage, getting jobs from the PanDA server and executing them. The original PanDA Pilot was designed over 10 years ago and has since then grown organically. Large parts of the original pilot code base are now getting old and are difficult to maintain. Incremental changes and refactoring have been pushed to the limit, and the time is now right for a fresh start, informed by a decade of experience, with the PanDA Pilot 2.0 Project. To create a testing environment for module development and automated unit and functional testing for next generation pilot tasks, a simple pilot version was developed. It resembles the basic workf...

PanDA: Exascale Federation of Resources for the ATLAS Experiment at the LHC

Directory of Open Access Journals (Sweden)

Megino Fernando Barreiro

2016-01-01

The PanDA (Production and Distributed Analysis system was developed in 2005 for the ATLAS experiment on top of this heterogeneous infrastructure to seamlessly integrate the computational resources and give the users the feeling of a unique system. Since its origins, PanDA has evolved together with upcoming computing paradigms in and outside HEP, such as changes in the networking model, Cloud Computing and HPC. It is currently running steadily up to 200 thousand simultaneous cores (limited by the available resources for ATLAS, up to two million aggregated jobs per day and processes over an exabyte of data per year. The success of PanDA in ATLAS is triggering the widespread adoption and testing by other experiments. In this contribution we will give an overview of the PanDA components and focus on the new features and upcoming challenges that are relevant to the next decade of distributed computing workload management using PanDA.

Using TES retrievals to investigate PAN in North American biomass burning plumes

Science.gov (United States)

Fischer, Emily V.; Zhu, Liye; Payne, Vivienne H.; Worden, John R.; Jiang, Zhe; Kulawik, Susan S.; Brey, Steven; Hecobian, Arsineh; Gombos, Daniel; Cady-Pereira, Karen; Flocke, Frank

2018-04-01

Peroxyacyl nitrate (PAN) is a critical atmospheric reservoir for nitrogen oxide radicals, and plays a lead role in their redistribution in the troposphere. We analyze new Tropospheric Emission Spectrometer (TES) PAN observations over North America from July 2006 to July 2009. Using aircraft observations from the Colorado Front Range, we demonstrate that TES can be sensitive to elevated PAN in the boundary layer (˜ 750 hPa) even in the presence of clouds. In situ observations have shown that wildfire emissions can rapidly produce PAN, and PAN decomposition is an important component of ozone production in smoke plumes. We identify smoke-impacted TES PAN retrievals by co-location with NOAA Hazard Mapping System (HMS) smoke plumes. Depending on the year, 15-32 % of cases where elevated PAN is identified in TES observations (retrievals with degrees of freedom (DOF) > 0.6) overlap smoke plumes during July. Of all the retrievals attempted in the July 2006 to July 2009 study period, 18 % is associated with smoke . A case study of smoke transport in July 2007 illustrates that PAN enhancements associated with HMS smoke plumes can be connected to fire complexes, providing evidence that TES is sufficiently sensitive to measure elevated PAN several days downwind of major fires. Using a subset of retrievals with TES 510 hPa carbon monoxide (CO) > 150 ppbv, and multiple estimates of background PAN, we calculate enhancement ratios for tropospheric average PAN relative to CO in smoke-impacted retrievals. Most of the TES-based enhancement ratios fall within the range calculated from in situ measurements.

PanDA for ATLAS Distributed Computing in the Next Decade

CERN Document Server

Barreiro Megino, Fernando Harald; The ATLAS collaboration

2016-01-01

The Production and Distributed Analysis (PanDA) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at the Large Hadron Collider (LHC) data processing scale. Heterogeneous resources used by the ATLAS experiment are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, dozens of scientific applications are supported, while data processing requires more than a few billion hours of computing usage per year. PanDA performed very well over the last decade including the LHC Run 1 data taking period. However, it was decided to upgrade the whole system concurrently with the LHC’s first long shutdown in order to cope with rapidly changing computing infrastructure. After two years of reengineering efforts, PanDA has embedded capabilities for fully dynamic and flexible workload management. The static batch job paradigm was discarde...

PanDA for ATLAS distributed computing in the next decade

CERN Document Server

AUTHOR|(SzGeCERN)643806; The ATLAS collaboration; De, Kaushik; Klimentov, Alexei; Maeno, Tadashi; Nilsson, Paul; Oleynik, Danila; Padolski, Siarhei; Panitkin, Sergey; Wenaus, Torre

2017-01-01

The Production and Distributed Analysis (PanDA) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at the Large Hadron Collider (LHC) data processing scale. Heterogeneous resources used by the ATLAS experiment are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, dozens of scientific applications are supported, while data processing requires more than a few billion hours of computing usage per year. PanDA performed very well over the last decade including the LHC Run 1 data taking period. However, it was decided to upgrade the whole system concurrently with the LHC’s first long shutdown in order to cope with rapidly changing computing infrastructure. After two years of reengineering efforts, PanDA has embedded capabilities for fully dynamic and flexible workload management. The static batch job paradigm was discarde...

Precision Photometry and Astrometry from Pan-STARRS

Science.gov (United States)

Magnier, Eugene A.; Pan-STARRS Team

2018-01-01

The Pan-STARRS 3pi Survey has been calibrated with excellent precision for both astrometry and photometry. The Pan-STARRS Data Release 1, opened to the public on 2016 Dec 16, provides photometry in 5 well-calibrated, well-defined bandpasses (grizy) astrometrically registered to the Gaia frame. Comparisons with other surveys illustrate the high quality of the calibration and provide tests of remaining systematic errors in both Pan-STARRS and those external surveys. With photometry and astrometry of roughly 3 billion astronomical objects, the Pan-STARRS DR1 has substantial overlap with Gaia, SDSS, 2MASS and other surveys. I will discuss the astrometric tie between Pan-STARRS DR1 and Gaia and show comparisons between Pan-STARRS and other large-scale surveys.

Fuel and energy saving in open pan furnace used in jaggery making through modified juice boiling/concentrating pans

International Nuclear Information System (INIS)

Anwar, S.I.

2010-01-01

In this paper the concept of fins has been used for heating purpose for improving efficiency of open pan jaggery making furnace. Pan is the integral part of these furnaces where boiling/concentration of sugarcane juice take place. Parallel fins were provided to the bottom of main pan and gutter pan of IISR Lucknow 2-pan furnace. Choice for type of fins was based on movement of flames and hot flue gases generated due to combustion of bagasse. Fins helped in more heat transfer to the sugarcane juice being concentrated. Considerable improvement in heat utilization efficiency (9.44%) was observed which resulted in saving of fuel and energy (31.34%).

Using TES retrievals to investigate PAN in North American biomass burning plumes

Directory of Open Access Journals (Sweden)

E. V. Fischer

2018-04-01

Full Text Available Peroxyacyl nitrate (PAN is a critical atmospheric reservoir for nitrogen oxide radicals, and plays a lead role in their redistribution in the troposphere. We analyze new Tropospheric Emission Spectrometer (TES PAN observations over North America from July 2006 to July 2009. Using aircraft observations from the Colorado Front Range, we demonstrate that TES can be sensitive to elevated PAN in the boundary layer (∼ 750 hPa even in the presence of clouds. In situ observations have shown that wildfire emissions can rapidly produce PAN, and PAN decomposition is an important component of ozone production in smoke plumes. We identify smoke-impacted TES PAN retrievals by co-location with NOAA Hazard Mapping System (HMS smoke plumes. Depending on the year, 15–32 % of cases where elevated PAN is identified in TES observations (retrievals with degrees of freedom (DOF > 0.6 overlap smoke plumes during July. Of all the retrievals attempted in the July 2006 to July 2009 study period, 18 % is associated with smoke . A case study of smoke transport in July 2007 illustrates that PAN enhancements associated with HMS smoke plumes can be connected to fire complexes, providing evidence that TES is sufficiently sensitive to measure elevated PAN several days downwind of major fires. Using a subset of retrievals with TES 510 hPa carbon monoxide (CO > 150 ppbv, and multiple estimates of background PAN, we calculate enhancement ratios for tropospheric average PAN relative to CO in smoke-impacted retrievals. Most of the TES-based enhancement ratios fall within the range calculated from in situ measurements.

Inter- and Intraspecific Variations in the Pectoral Muscles of Common Chimpanzees (Pan troglodytes), Bonobos (Pan paniscus), and Humans (Homo sapiens)

OpenAIRE

Potau, J. M.; Arias-Martorell, J.; Bello-Hellegouarch, G.; Casado, A.; Pastor, J. F.; de Paz, F.; Diogo, R.

2018-01-01

We have analyzed anatomic variations in the pectoralis major and pectoralis minor muscles of common chimpanzees (Pan\\ud troglodytes) and bonobos(Pan paniscus) and compared them to anatomic variations in these muscles in humans(Homo sapiens). We\\ud have macroscopically dissected these muscles in six adult Pan troglodytes, five Pan paniscus of ages ranging from fetus to adult, and\\ud five adult Homo sapiens. Although Pan troglodytes are thought to lack a separate pectoralis abdominis muscle, we...

A spatial neural fuzzy network for estimating pan evaporation at ungauged sites

Directory of Open Access Journals (Sweden)

C.-H. Chung

2012-01-01

Full Text Available Evaporation is an essential reference to the management of water resources. In this study, a hybrid model that integrates a spatial neural fuzzy network with the kringing method is developed to estimate pan evaporation at ungauged sites. The adaptive network-based fuzzy inference system (ANFIS can extract the nonlinear relationship of observations, while kriging is an excellent geostatistical interpolator. Three-year daily data collected from nineteen meteorological stations covering the whole of Taiwan are used to train and test the constructed model. The pan evaporation (E_pan at ungauged sites can be obtained through summing up the outputs of the spatially weighted ANFIS and the residuals adjusted by kriging. Results indicate that the proposed AK model (hybriding ANFIS and kriging can effectively improve the accuracy of E_pan estimation as compared with that of empirical formula. This hybrid model demonstrates its reliability in estimating the spatial distribution of E_pan and consequently provides precise E_pan estimation by taking geographical features into consideration.

Investigation of needleless electrospun PAN nanofiber mats

Science.gov (United States)

Sabantina, Lilia; Mirasol, José Rodríguez; Cordero, Tomás; Finsterbusch, Karin; Ehrmann, Andrea

2018-04-01

Polyacrylonitrile (PAN) can be spun from a nontoxic solvent (DMSO, dimethyl sulfoxide) and is nevertheless waterproof, opposite to the biopolymers which are spinnable from aqueous solutions. This makes PAN an interesting material for electrospinning nanofiber mats which can be used for diverse biotechnological or medical applications, such as filters, cell growth, wound healing or tissue engineering. On the other hand, PAN is a typical base material for producing carbon nanofibers. Nevertheless, electrospinning PAN necessitates convenient spinning parameters to create nanofibers without too many membranes or agglomerations. Thus we have studied the influence of spinning parameters on the needleless electrospinning process of PAN dissolved in DMSO and the resulting nanofiber mats.

Peter Pan-demien

DEFF Research Database (Denmark)

Holm, Claus

2009-01-01

Ungdommelig opførsel er moderne. I gamle dage skulle vi blive voksne. I dag skal selv gamle mænd og kvinder holde sig unge. Peter Pan-panikken er i os, og en af vores væsentligste sociale lidelser er umodenhed.......Ungdommelig opførsel er moderne. I gamle dage skulle vi blive voksne. I dag skal selv gamle mænd og kvinder holde sig unge. Peter Pan-panikken er i os, og en af vores væsentligste sociale lidelser er umodenhed....

Damage of plants due to peroxyacyl nitrates (PAN)

Energy Technology Data Exchange (ETDEWEB)

Fukuda, H.; Terakado, K.

1974-02-01

In Japan plant damages began to resemble those due to PAN about 1972. Exposure experiments with artifically synthesized PAN in an environment simulation room determined the concentration of PAN and its duration to examine the relationship between these data in the field and crop damage. Synthesized PAN created by irradiating a mixture of ethyl nitrate and oxygen with ultraviolet light gave results similar to those seen in fields. From the end of April to the end of November, damages to petunias seemingly due to PAN appeared 15 times. The symptoms differed with the variety of petunia. After 14 experiments in fields from September 20 to November 30 with a continuous determination of the environmental concentration of PAN, damages to petunia were confirmed on 6 days when the maximum PAN concentration range was 3.0-6.7 ppb. The duration of concentrations higher than 3 ppb was 2-13 hr. The most serious damage appeared on September 20 when a concentration of more than 5 ppb continued for 7 hours. No damage appeared with a long continuation (6-12 hr) of a lower concentration of PAN of 2 ppb. Inter-varietal grafting showed that the symptoms and the degree of damage due to PAN were influenced only by the physiological specificity of the aerial portion of the plant. Leaves which are most affected by PAN differed with the variety of petunia.

Concentration of uranium on TiO-PAN and NaTiO-PAN composite absorbers

International Nuclear Information System (INIS)

Motl, Alois; Sebesta, Ferdinand; John, Jan; Spendlikova, Irena; Nemec, Mojmir

2013-01-01

Inorganic ion exchangers have been extensively tested for use in separation and concentration of uranium from Surface water. Except for separation of uranium from uranium -Contaminated waste water (e.g. waste water from mining and milling of uranium, Waste from nuclear fuel reprocessing) their main area of application has been foreseen to be their use for extraction of uranium from sea water which could partially cover future needs of uranium. Another perspective area of application is pre-concentration of uranium from natural waters followed by uranium determination via various specialized techniques such as TRLFS or AMS. Possibilities of uranium extraction from sea water have been subject of several international conferences (e.g. Topical meetings on the Recovery of Uranium from Seawater in 1980's, ACS National Meetings 2012 etc.) and are critically evaluated in a review by Bitte or recently by Kim. In the Czech Republic uranium-selective inorganic ion exchangers might be applied for treatment of various wastes from uranium industry, namely underground Water, uranium milling over-balance water, or acid waste water from underground uranium leaching and also like in other countries for determination of uranium isotopic composition focusing on anthropogenic and natural 236 U content. Among the best performing inorganic ion exchangers for the above listed purposes hydrated titanium dioxide (abbreviated as TiO) and sodium titanate (abbreviated as NaTiO) can be listed. Properties of TiO and NaTiO were reviewed by Lehto. From the point of view of ion-exchange, properties of hydrated titanium oxide and sodium titanate are very similar. The main disadvantage of these ion exchangers for industrial-scale application is their insufficient mechanical stability. To improve this property, the sorption materials can be embedded into a binding matrix. Modified polyacrylonitrile (PAN) has been proposed at the Czech Technical University in Prague as a universal binding matrix for

Comparison of emergency medical services systems across Pan-Asian countries: a Web-based survey.

Science.gov (United States)

Shin, Sang Do; Ong, Marcus Eng Hock; Tanaka, Hideharu; Ma, Matthew Huei-Ming; Nishiuchi, Tatsuya; Alsakaf, Omer; Karim, Sarah Abdul; Khunkhlai, Nalinas; Lin, Chih-Hao; Song, Kyoung Jun; Ryoo, Hyun Wook; Ryu, Hyun Ho; Tham, Lai Peng; Cone, David C

2012-01-01

There are great variations in out-of-hospital cardiac arrest (OHCA) survival outcomes among different countries and different emergency medical services (EMS) systems. The impact of different systems and their contribution to enhanced survival are poorly understood. This paper compares the EMS systems of several Asian sites making up the Pan-Asian Resuscitation Outcomes Study (PAROS) network. Some preliminary cardiac arrest outcomes are also reported. This is a cross-sectional descriptive survey study addressing population demographics, service levels, provider characteristics, system operations, budget and finance, medical direction (leadership), and oversight. Most of the systems are single-tiered. Fire-based EMS systems are predominant. Bangkok and Kuala Lumpur have hospital-based systems. Service level is relatively low, from basic to intermediate in most of the communities. Korea, Japan, Singapore, and Bangkok have intermediate emergency medical technician (EMT) service levels, while Taiwan and Dubai have paramedic service levels. Medical direction and oversight have not been systemically established, except in some communities. Systems are mostly dependent on public funding. We found variations in available resources in terms of ambulances and providers. The number of ambulances is 0.3 to 3.2 per 100,000 population, and most ambulances are basic life support (BLS) vehicles. The number of human resources ranges from 4.0 per 100,000 population in Singapore to 55.7 per 100,000 population in Taipei. Average response times vary between 5.1 minutes (Tainan) and 22.5 minutes (Kuala Lumpur). We found substantial variation in 11 communities across the PAROS EMS systems. This study will provide the foundation for understanding subsequent studies arising from the PAROS effort.

Global heterogeneous resource harvesting: the next-generation PanDA Pilot for ATLAS

CERN Document Server

Nilsson, Paul; The ATLAS collaboration

2017-01-01

The Production and Distributed Analysis system (PanDA), used for workload management in the ATLAS Experiment for over a decade, has in recent years expanded its reach to diverse new resource types such as HPCs, and innovative new workflows such as the Event Service. PanDA meets the heterogeneous resources it harvests in the PanDA pilot, which has embarked on a next-generation reengineering to efficiently integrate and exploit the new platforms and workflows. The new modular architecture is the product of a year of design and prototyping in conjunction with the design of a completely new component, Harvester, that will mediate a richer flow of control and information between pilot and PanDA. Harvester will enable more intelligent and dynamic matching between processing tasks and resources, with an initial focus on HPCs, simplifying the operator and user view of a PanDA site but internally leveraging deep information gathering on the resource to accrue detailed knowledge of a site's capabilities and dynamic sta...

Global heterogeneous resource harvesting: the next-generation PanDA pilot for ATLAS

CERN Document Server

Nilsson, Paul; The ATLAS collaboration

2017-01-01

The Production and Distributed Analysis system (PanDA), used for workload management in the ATLAS Experiment for over a decade, has in recent years expanded its reach to diverse new resource types such as HPCs, and innovative new workflows such as the event service. PanDA meets the heterogeneous resources it harvests in the PanDA pilot, which has embarked on a next-generation reengineering to efficiently integrate and exploit the new platforms and workflows. The new modular architecture is the product of a year of design and prototyping in conjunction with the design of a completely new component, Harvester, that will mediate a richer flow of control and information between pilot and PanDA. Harvester will enable more intelligent and dynamic matching between processing tasks and resources, with an initial focus on HPCs, simplifying the operator and user view of a PanDA site but internally leveraging deep information gathering on the resource to accrue detailed knowledge of a site's capabilities and dynamic sta...

Bioenergy and biodiversity: Key lessons from the Pan American region

Energy Technology Data Exchange (ETDEWEB)

Kline, Keith L. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Martinelli, Fernanda Silva [UFRRJ/Conservation International Brazil, Seropedica (Brazil); Mayer, Audrey L. [Michigan Technological Univ., Houghton, MI (United States); Medeiros, Rodrigo [Federal Rural Univ. of Rio de Janeiro, Rio de Janeiro (Brazil); Oliveira, Camila Ortolan F. [Univ. of Campinas, Campinas (Brazil); Sparovek, Gerd [Univ. of Sao Paulo, Piracicaba (Brazil); Walter, Arnaldo [Univ. of Campinas, Campinas (Brazil); Venier, Lisa A. [Canadian Forest Service, Sault Ste. Marie (Canada). Great Lakes Forestry Centre

2015-06-24

Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil, regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land management systems. Lastly, we propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region.

Bioenergy and Biodiversity: Key Lessons from the Pan American Region

Science.gov (United States)

Kline, Keith L.; Martinelli, Fernanda Silva; Mayer, Audrey L.; Medeiros, Rodrigo; Oliveira, Camila Ortolan F.; Sparovek, Gerd; Walter, Arnaldo; Venier, Lisa A.

2015-12-01

Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land-management systems. We propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region.

Studies of scintillator response to 60 MeV protons in a proton beam imaging system

Directory of Open Access Journals (Sweden)

Rydygier Marzena

2015-09-01

Full Text Available A Proton Beam Imaging System (ProBImS is under development at the Institute of Nuclear Physics, Polish Academy of Sciences (IFJ PAN. The ProBImS will be used to optimize beam delivery at IFJ PAN proton therapy facilities, delivering two-dimensional distributions of beam profiles. The system consists of a scintillator, optical tract and a sensitive CCD camera which digitally records the light emitted from the proton-irradiated scintillator. The optical system, imaging data transfer and control software have already been developed. Here, we report preliminary results of an evaluation of the DuPont Hi-speed thick back screen EJ 000128 scintillator to determine its applicability in our imaging system. In order to optimize the light conversion with respect to the dose locally deposited by the proton beam in the scintillation detector, we have studied the response of the DuPont scintillator in terms of linearity of dose response, uniformity of light emission and decay rate of background light after deposition of a high dose in the scintillator. We found a linear dependence of scintillator light output vs. beam intensity by showing the intensity of the recorded images to be proportional to the dose deposited in the scintillator volume.

FEREAD: Front End Readout software for the Fermilab PAN-DA data acquisition system

International Nuclear Information System (INIS)

Dorries, T.; Haire, M.; Moore, C.; Pordes, R.; Votava, M.

1989-05-01

The FEREAD system provides a multi-tasking framework for controlling the execution of experiment specific front end readout processes. It supports initializing the front end data acquisition hardware, queueing and processing readout activation signals, cleaning up at the end of data acquisition, and transferring configuration parameters and statistical data between a ''Host'' computer and the readout processes. FEREAD is implemented as part of the PAN-DA software system and is designed to run on any Motorola 68k based processor board. It has been ported to the FASTBUS General Purpose Master (GPM) interface board and the VME MVME133A processor board using the pSOS/Microtec environment. 12 refs., 2 figs

Prevalence of oral lesions in pan vendor

Directory of Open Access Journals (Sweden)

Prakash Gadodia

2011-01-01

Full Text Available Background: Being a portal of entry to various smoking and smokeless tobacco products, oral cavity is prone to deleterious effects. Present study consist of epidemiological survey to elucidate oral lesions in pan vendors. Aims and objectives: To detect oral lesions in pan vendors and compare it with controls. To detect habit pattern and prevalence of OSMF and other lesions in pan vendors as compared to controls- To identify, recognize and evaluate the possible etiology for OSMF, encompassing various chewing and smoking habits. Materials and methods: Study population consist of 170 pan vendors with age ranging from 15 to 55 years and equal number of sex matched controls selected randomly. Results: Prevalence of oral lesions in pan vendors is statistically significantly higher as compared to controls. The habit of arecanut chewing in various forms was present in all cases. The habit of smoking and smokeless tobacco products was present in all cases. Conclusion: Pan vendors are at higher risk for oral lesions than controls. There is increase in relative risk with increase in duration and frequency of habit.

CanWEA Pan-Canadian wind integration study paper

Energy Technology Data Exchange (ETDEWEB)

Tremblay, Martin [GL Garrad Hassan Canada Inc, Ottawa, ON (Canada); Gardner, Paul [GL Garrad Hassan and Partners, Glasgow (United Kingdom); Price, Doug; Le, Don [GL Garrad Hassan America, San Diego, CA (United States)

2010-07-01

GL Garrad Hassan has been contracted by CanWEA to undertake a scoping study for a future Pan-Canadian Wide-Scale Wind Integration Study. The scoping study provides the methodology and the rationale on which the actual wind integration study and request for proposals will be based on. Major system operators and owners of each Canadian Province along with experts involved in major US wind integration studies have been consulted and contributed to the decisional process. This paper provides a summary of the factors considered in the study and outline the actual methodology that was adopted for the future Pan-Canadian wind integration study. (orig.)

Archives: Pan African Medical Journal

African Journals Online (AJOL)

Items 1 - 28 of 28 ... Archives: Pan African Medical Journal. Journal Home > Archives: Pan African Medical Journal. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives. 1 - 28 of 28 Items ...

Tibet- Himalayan Analogs of Pan-African Shear Zones : Implications for Neoproterozoic Tectonics

Science.gov (United States)

Attoh, K.; Brown, L. D.

2009-12-01

Large-scale shear zones are distinct features of Tibet-Himalayan orogen and the Pan-African Trans-Saharan belt. Prominent examples in the Pan-African-belt extend for ~2500 km from the Sahara to the Gulf of Guinea and are characterized by right-slip movements. The NS shear zones, such as 4°50’-Kandi shear zone (KSZ) are complemented by NE-SW shear zones that preserve a record of sinistral movements and are represented by the Central Cameroon shear zone (CCSZ) in the eastern part of the Pan-African domain. The West African shear zones project into similar structures in the Borborema Province of northeast Brazil. In addition, the Pan-African belt preserves structures and rock assemblages that indicate subduction-collision tectonics We propose that structures of Tibet-Himalayan collisional orogen are instructive analogs of the Pan-African structures where: (i) the Pan-African front corresponds to the Main Himalayan thrust and it’s splays; (ii) the main Pan-African suture zone is analogous to the Indus-Tsangpo suture in the Tibet-Himalayan belt; (iii) the 4°50’-KSZ corresponds to Karakoram and it’s linkages with Jiali fault system and (iv) left-slip CCSZ and related shear zones are analogs of Altyn Tagh and Kumlun faults and their splays. This suggests the operation of escape-type tectonics in the Neoproterozoic belt of West-Africa and predicts the nature of the deep structures in the Cenozoic Tibet-Himalayan orogen.

What do PANs Tell us about VOC-NOx Photochemistry in the Urban/Rural Interface?

Science.gov (United States)

Roberts, J. M.; Flocke, F. M.; Zheng, W.; Bertman, S.; Marchewka, M.; Williams, E.; Lerner, B.; Kuster, W.; Goldan, P.; Gilman, J.; Sommariva, R.; Trainer, M.; Fehsenfeld, F.

2006-12-01

Peroxycarboxylic Nitric Anhydrides (PANs) are co-products of the VOC-NOx photochemistry that is responsible for O3 and secondary organic aerosol (SOA) formation in the troposphere. The relative abundance of the various PAN type compounds can provide important diagnostic information as to the contribution of different VOC sources to these processes. Anthropogenic, biogenic and petrochemical VOC sources have shown distinct profiles of PAN, PPN, MPAN, PiBN, and APAN, which can be analyzed using simple numerical models and compared to the results of detailed chemical mechanisms. One result of these studies is that the PAN compounds can be used to better define the contribution of isoprene to O3 production in the urban/rural interface. Another result is that high relative concentrations of APAN are characteristic of high petrochemical source impact. In addition, changes in the relative abundance of PPN and PAN can indicate the aging of a continental photochemical plume. This paper will present selected results from five field experiments and modeling studies from the Nashville 1999 Southern Oxidant Study up through the TexAQS 2006 study, in and around Houston, TX.

Student-Centered Designs of Pan-African Literature Courses

Science.gov (United States)

M'Baye, Babacar

2010-01-01

A student-centered teaching methodology is an essential ingredient of a successful Pan-African literary course. In this article, the author defines Pan-Africanism and how to go about designing a Pan-African literature course. The author combines reading assignments with journals, film presentations, and lectures in a productive learning…

Is Pan-Asian Economic Integration Moving Forward?: Evidence from Pan-Asian Trade Statistics

OpenAIRE

Sapkota, Jeet Bahadur; Shuto, Motoko

2016-01-01

Asia is growing economically faster than any other region in the world; this led to the shift of the center of gravity of the global economy from the West to the East. However, it is not clear whether the Asian economy is integrating regionally or globally. In the context of the growing efforts of regional or sub-regional pan-Asian integration, it is worthwhile to explore the pan-Asian trade flows regionally as well as globally. Thus, this paper examines the trend and determinants of economic...

SEARCHING FOR SUB-KILOMETER TRANS-NEPTUNIAN OBJECTS USING PAN-STARRS VIDEO MODE LIGHT CURVES: PRELIMINARY STUDY AND EVALUATION USING ENGINEERING DATA

International Nuclear Information System (INIS)

Wang, J.-H.; Protopapas, P.; Alcock, C. R.; Chen, W.-P.; Burgett, W. S.; Morgan, J. S.; Price, P. A.; Tonry, J. L.; Dombeck, T.; Grav, T.

2010-01-01

We present a pre-survey study of using the Panoramic Survey Telescope and Rapid Response System (Pan-STARRS) high sampling rate video mode guide star images to search for trans-Neptunian objects (TNOs). Guide stars are primarily used by Pan-STARRS to compensate for image motion and hence improve the point-spread function. With suitable selection of the guide stars within the Pan-STARRS 7 deg 2 field of view, the light curves of these guide stars can also be used to search for occultations by TNOs. The best target stars for this purpose are stars with high signal-to-noise ratio (S/N) and small angular size. In order to do this, we compiled a catalog using the S/N calculated from stars with m V 0 ), we are able to set an upper limit of N(>0.5 km) ∼ 2.47 x 10 10 deg -2 at 95% confidence limit.

Dynamic analysis of pan evaporation variations in the Huai River Basin, a climate transition zone in eastern China.

Science.gov (United States)

Li, Meng; Chu, Ronghao; Shen, Shuanghe; Islam, Abu Reza Md Towfiqul

2018-06-01

Pan evaporation (E pan ), which we examine in this study to better understand atmospheric evaporation demand, represents a pivotal indicator of the terrestrial ecosystem and hydrological cycle, particularly in the Huai River Basin (HRB) in eastern China, where high potential risks of drought and flooding are commonly observed. In this study, we examine the spatiotemporal trend patterns of climatic factors and E pan by using the Mann-Kendall test and the Theil-Sen estimator based on a daily meteorological dataset from 89 weather stations during 1965-2013 in the HRB. Furthermore, the PenPan model is employed to estimate E pan at a monthly time scale, and a differential equation method is applied to quantify contributions from four meteorological variables to E pan trends. The results show that E pan significantly decreased (P<0.001) at an average rate of -8.119mm·a -2 at annual time scale in the whole HRB, with approximately 90% of stations occupied. Meanwhile, the generally higher E pan values were detected in the northern HRB. The values of the aerodynamic components in the PenPan model were much greater than those of the radiative components, which were responsible for the variations in the E pan trend. The significantly decreasing wind speed (u 2 ) was the most dominant factor that controlled the decreasing E pan trend at each time scale, followed by the notable decreasing net radiation (R n ) at the annual time scale also in growing season and summer. However, the second dominant factor shifted to the mean temperature (T a ) during the spring and winter and the vapor pressure deficit (vpd) during the autumn. These phenomena demonstrated a positive link between the significance of climate variables and their control over the E pan trend. Copyright © 2017 Elsevier B.V. All rights reserved.

Development and characterization of highly oriented PAN nanofiber

Directory of Open Access Journals (Sweden)

M. Sadrjahani

2010-12-01

Full Text Available A simple and non-conventional electrospinning technique was employed for producing highly oriented Polyacrylonitrile (PAN nanofibers. The PAN nanofibers were electrospun from 14 wt% solution of PAN in dimethylformamid (DMF at 11 kv on a rotating drum with various linear speeds from 22.5 m/min to 67.7 m/min. The influence of take up velocity was investigated on the degree of alignment, internal structure and mechanical properties of collected PAN nanofibers. Using an image processing technique, the best degree of alignment was obtained for those nanofibers collected at a take up velocity of 59.5 m/min. Moreover, Raman spectroscopy was used for measuring molecular orientation of PAN nanofibers. Similarly, a maximum chain orientation parameter of 0.25 was determined for nanofibers collected at a take up velocity of 59.5 m/min.

gLExec Integration with the ATLAS PanDA Workload Management System

CERN Document Server

Edward Karavakis; The ATLAS collaboration; Campana, Simone; De, Kaushik; Di Girolamo, Alessandro; Maarten Litmaath; Maeno, Tadashi; Medrano Llamas, Ramon; Nilsson, Paul; Wenaus, Torre

2015-01-01

The ATLAS Experiment at the Large Hadron Collider has collected data during Run 1 and is ready to collect data in Run 2. The ATLAS data are distributed, processed and analysed at more than 130 grid and cloud sites across the world. At any given time, there are more than 150,000 concurrent jobs running and about a million jobs are submitted on a daily basis on behalf of thousands of physicists within the ATLAS collaboration. The Production and Distributed Analysis (PanDA) workload management system has proved to be a key component of ATLAS and plays a crucial role in the success of the large-scale distributed computing as it is the sole system for distributed processing of Grid jobs across the collaboration since October 2007. ATLAS user jobs are executed on worker nodes by pilots sent to the sites by pilot factories. This pilot architecture has greatly improved job reliability and although it has clear advantages, such as making the working environment homogeneous by hiding any potential heterogeneities, the ...

PanDA: Exascale Federation of Resources for the ATLAS Experiment at the LHC

Science.gov (United States)

Barreiro Megino, Fernando; Caballero Bejar, Jose; De, Kaushik; Hover, John; Klimentov, Alexei; Maeno, Tadashi; Nilsson, Paul; Oleynik, Danila; Padolski, Siarhei; Panitkin, Sergey; Petrosyan, Artem; Wenaus, Torre

2016-02-01

After a scheduled maintenance and upgrade period, the world's largest and most powerful machine - the Large Hadron Collider(LHC) - is about to enter its second run at unprecedented energies. In order to exploit the scientific potential of the machine, the experiments at the LHC face computational challenges with enormous data volumes that need to be analysed by thousand of physics users and compared to simulated data. Given diverse funding constraints, the computational resources for the LHC have been deployed in a worldwide mesh of data centres, connected to each other through Grid technologies. The PanDA (Production and Distributed Analysis) system was developed in 2005 for the ATLAS experiment on top of this heterogeneous infrastructure to seamlessly integrate the computational resources and give the users the feeling of a unique system. Since its origins, PanDA has evolved together with upcoming computing paradigms in and outside HEP, such as changes in the networking model, Cloud Computing and HPC. It is currently running steadily up to 200 thousand simultaneous cores (limited by the available resources for ATLAS), up to two million aggregated jobs per day and processes over an exabyte of data per year. The success of PanDA in ATLAS is triggering the widespread adoption and testing by other experiments. In this contribution we will give an overview of the PanDA components and focus on the new features and upcoming challenges that are relevant to the next decade of distributed computing workload management using PanDA.

Pan-genome and phylogeny of Bacillus cereus sensu lato.

Science.gov (United States)

Bazinet, Adam L

2017-08-02

produced phylogenies that were largely concordant with each other and with previous studies. Phylogenetic support as measured by bootstrap probabilities increased markedly when all suitable pan-genome data was included in phylogenetic analyses, as opposed to when only core genes were used. Bayesian population genetic analysis recommended subdividing the three major clades of B. cereus s. l. into nine clusters. Taxa sharing common traits and species designations exhibited varying degrees of phylogenetic clustering. All phylogenetic analyses recapitulated two previously used classification systems, and taxa were consistently assigned to the same major clade and group. By including accessory genes from the pan-genome in the phylogenetic analyses, I produced an exceptionally well-supported phylogeny of 114 complete B. cereus s. l. genomes. The best-performing methods were used to produce a phylogeny of all 498 publicly available B. cereus s. l. genomes, which was in turn used to compare three different classification systems and to test the monophyly status of various B. cereus s. l. species. The majority of the methodology used in this study is generic and could be leveraged to produce pan-genome estimates and similarly robust phylogenetic hypotheses for other bacterial groups.

EUPAN enables pan-genome studies of a large number of eukaryotic genomes.

Science.gov (United States)

Hu, Zhiqiang; Sun, Chen; Lu, Kuang-Chen; Chu, Xixia; Zhao, Yue; Lu, Jinyuan; Shi, Jianxin; Wei, Chaochun

2017-08-01

Pan-genome analyses are routinely carried out for bacteria to interpret the within-species gene presence/absence variations (PAVs). However, pan-genome analyses are rare for eukaryotes due to the large sizes and higher complexities of their genomes. Here we proposed EUPAN, a eukaryotic pan-genome analysis toolkit, enabling automatic large-scale eukaryotic pan-genome analyses and detection of gene PAVs at a relatively low sequencing depth. In the previous studies, we demonstrated the effectiveness and high accuracy of EUPAN in the pan-genome analysis of 453 rice genomes, in which we also revealed widespread gene PAVs among individual rice genomes. Moreover, EUPAN can be directly applied to the current re-sequencing projects primarily focusing on single nucleotide polymorphisms. EUPAN is implemented in Perl, R and C ++. It is supported under Linux and preferred for a computer cluster with LSF and SLURM job scheduling system. EUPAN together with its standard operating procedure (SOP) is freely available for non-commercial use (CC BY-NC 4.0) at http://cgm.sjtu.edu.cn/eupan/index.html . ccwei@sjtu.edu.cn or jianxin.shi@sjtu.edu.cn. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

PanDA: A New Paradigm for Distributed Computing in HEP Through the Lens of ATLAS and other Experiments

CERN Document Server

De, K; The ATLAS collaboration; Maeno, T; Nilsson, P; Wenaus, T

2014-01-01

Experiments at the Large Hadron Collider (LHC) face unprecedented computing challenges. Heterogeneous resources are distributed worldwide, thousands of physicists analyzing the data need remote access to hundreds of computing sites, the volume of processed data is beyond the exabyte scale, and data processing requires more than a billion hours of computing usage per year. The PanDA (Production and Distributed Analysis) system was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. In the process, the old batch job paradigm of computing in HEP was discarded in favor of a far more flexible and scalable model. The success of PanDA in ATLAS is leading to widespread adoption and testing by other experiments. PanDA is the first exascale workload management system in HEP, already operating at a million computing jobs per day, and processing over an exabyte of data in 2013. We will describe the design and implementation of PanDA, present data on the performance of PanDA a...

Multi-Column Xe/Kr Separation with AgZ-PAN and HZ-PAN

International Nuclear Information System (INIS)

Greenhalgh, Mitchell Randy; Garn, Troy Gerry; Welty, Amy Keil; Watson, Tony Leroy

2016-01-01

Previous multi-column xenon/krypton separation tests have demonstrated the capability of separating xenon from krypton in a mixed gas feed stream. The results of this initial testing with AgZ-PAN and HZ-PAN indicated that an excellent separation of xenon from krypton could be achieved. Building upon these initial results, a series of additional multi-column testing were performed in FY-16. The purpose of this testing was to scale up the sorbent beds, test a different composition of feed gas and attempt to improve the accuracy of the analysis of the individual capture columns' compositions. Two Stirling coolers were installed in series to perform this testing. The use of the coolers instead of the cryostat provided two desired improvements, 1) removal of the large dilution due to the internal volume of the cryostat adsorption chamber, and 2) ability to increase the sorbent bed size for scale-up. The AgZ-PAN sorbent, due to its xenon selectivity, was loaded in the first column to capture the xenon while allowing the krypton to flow through and be routed to a second column containing the HZ-PAN for capture and analysis. The gases captured on both columns were sampled with evacuated sample bombs and subsequently analyzed via GC-MS for both krypton and xenon. The results of these tests can be used to develop the scope of future testing and analysis using this test bed for demonstrating the capture and separation of xenon and krypton using sorbents, for demonstrating desorption and regeneration of the sorbents, and for determining compositions of the desorbed gases. They indicate a need for future desorption studies in order to better quantify co-adsorbed species and final krypton purity.

Multi-Column Xe/Kr Separation with AgZ-PAN and HZ-PAN

Energy Technology Data Exchange (ETDEWEB)

Greenhalgh, Mitchell Randy [Idaho National Lab. (INL), Idaho Falls, ID (United States); Garn, Troy Gerry [Idaho National Lab. (INL), Idaho Falls, ID (United States); Welty, Amy Keil [Idaho National Lab. (INL), Idaho Falls, ID (United States); Watson, Tony Leroy [Idaho National Lab. (INL), Idaho Falls, ID (United States)

2016-08-01

Previous multi-column xenon/krypton separation tests have demonstrated the capability of separating xenon from krypton in a mixed gas feed stream. The results of this initial testing with AgZ-PAN and HZ-PAN indicated that an excellent separation of xenon from krypton could be achieved. Building upon these initial results, a series of additional multi-column testing were performed in FY-16. The purpose of this testing was to scale up the sorbent beds, test a different composition of feed gas and attempt to improve the accuracy of the analysis of the individual capture columns’ compositions. Two Stirling coolers were installed in series to perform this testing. The use of the coolers instead of the cryostat provided two desired improvements, 1) removal of the large dilution due to the internal volume of the cryostat adsorption chamber, and 2) ability to increase the sorbent bed size for scale-up. The AgZ-PAN sorbent, due to its xenon selectivity, was loaded in the first column to capture the xenon while allowing the krypton to flow through and be routed to a second column containing the HZ-PAN for capture and analysis. The gases captured on both columns were sampled with evacuated sample bombs and subsequently analyzed via GC-MS for both krypton and xenon. The results of these tests can be used to develop the scope of future testing and analysis using this test bed for demonstrating the capture and separation of xenon and krypton using sorbents, for demonstrating desorption and regeneration of the sorbents, and for determining compositions of the desorbed gases. They indicate a need for future desorption studies in order to better quantify co-adsorbed species and final krypton purity.

PanDA for ATLAS distributed computing in the next decade

Science.gov (United States)

Barreiro Megino, F. H.; De, K.; Klimentov, A.; Maeno, T.; Nilsson, P.; Oleynik, D.; Padolski, S.; Panitkin, S.; Wenaus, T.; ATLAS Collaboration

2017-10-01

The Production and Distributed Analysis (PanDA) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at the Large Hadron Collider (LHC) data processing scale. Heterogeneous resources used by the ATLAS experiment are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, dozens of scientific applications are supported, while data processing requires more than a few billion hours of computing usage per year. PanDA performed very well over the last decade including the LHC Run 1 data taking period. However, it was decided to upgrade the whole system concurrently with the LHC’s first long shutdown in order to cope with rapidly changing computing infrastructure. After two years of reengineering efforts, PanDA has embedded capabilities for fully dynamic and flexible workload management. The static batch job paradigm was discarded in favor of a more automated and scalable model. Workloads are dynamically tailored for optimal usage of resources, with the brokerage taking network traffic and forecasts into account. Computing resources are partitioned based on dynamic knowledge of their status and characteristics. The pilot has been re-factored around a plugin structure for easier development and deployment. Bookkeeping is handled with both coarse and fine granularities for efficient utilization of pledged or opportunistic resources. An in-house security mechanism authenticates the pilot and data management services in off-grid environments such as volunteer computing and private local clusters. The PanDA monitor has been extensively optimized for performance and extended with analytics to provide aggregated summaries of the system as well as drill-down to operational details. There are as well many other challenges planned or recently implemented, and adoption by non-LHC experiments such

La dionisización del dios Pan

Directory of Open Access Journals (Sweden)

Silvia Porres Caballero

2012-09-01

Full Text Available Pan is a god peculiar in many respects. In contrast to the other gods of the Greek pantheon, he is not anthropomorphic, but he has the legs, tail and horns of a goat. These features show his age. A god like Pan can only survive in Arcadia, a region that preserves many religious archaisms. However, from 490 BC, when his cult is established in Athens, this god begins to change. In his evolution, Pan becomes increasingly assimilated the god Dionysus. The rapprochement between the two gods left his mark on the mythology, but especially in the cult of Pan. Thus, a god who was worshiped in Arcadia in sanctuaries built by men, in the rest of Greece is worshiped in wild shrines, mainly caves. Out of Arcadia, the grotto also is the place reserved for the mystery cults, including the Dionysian ones. Does not seem a coincidence

Distinct apoptotic blocks mediate resistance to panHER inhibitors in HER2+ breast cancer cells.

Science.gov (United States)

Karakas, Bahriye; Ozmay, Yeliz; Basaga, Huveyda; Gul, Ozgur; Kutuk, Ozgur

2018-05-04

Despite the development of novel targeted therapies, de novo or acquired chemoresistance remains a significant factor for treatment failure in breast cancer therapeutics. Neratinib and dacomitinib are irreversible panHER inhibitors, which block their autophosphorylation and downstream signaling. Moreover, neratinib and dacomitinib have been shown to activate cell death in HER2-overexpressing cell lines. Here we showed that increased MCL1 and decreased BIM and PUMA mediated resistance to neratinib in ZR-75-30 and SKBR3 cells while increased BCL-XL and BCL-2 and decreased BIM and PUMA promoted neratinib resistance in BT474 cells. Cells were also cross-resistant to dacomitinib. BH3 profiles of HER2+ breast cancer cells efficiently predicted antiapoptotic protein dependence and development of resistance to panHER inhibitors. Reactivation of ERK1/2 was primarily responsible for acquired resistance in SKBR3 and ZR-75-30 cells. Adding specific ERK1/2 inhibitor SCH772984 to neratinib or dacomitinib led to increased apoptotic response in neratinib-resistant SKBR3 and ZR-75-30 cells, but we did not detect a similar response in neratinib-resistant BT474 cells. Accordingly, suppression of BCL-2/BCL-XL by ABT-737 was required in addition to ERK1/2 inhibition for neratinib- or dacomitinib-induced apoptosis in neratinib-resistant BT474 cells. Our results showed that different mitochondrial apoptotic blocks mediated acquired panHER inhibitor resistance in HER2+ breast cancer cell lines as well as highlighted the potential of BH3 profiling assay in prediction of panHER inhibitor resistance in breast cancer cells. Copyright © 2018 Elsevier B.V. All rights reserved.

PanJen

DEFF Research Database (Denmark)

Jensen, Cathrine Ulla; Panduro, Toke Emil

functional transformations, driven by an a priori and theory-based hypothesis. The plots and model fit metrics enable users to make an informed choice of how to specify the functional form the regression. We show that the PanJen ranking outperforms the Box-Tidwell transformation, especially in the presence...... of inefficiency, heteroscedasticity or endogeneity....

75 FR 47262 - Federal Consistency Appeal by Pan American Grain Co.

Science.gov (United States)

2010-08-05

... by Pan American Grain Co. AGENCY: National Oceanic and Atmospheric Administration (NOAA), Department..., closure of the decision record in an administrative appeal filed by Pan American Grain Co. (Pan American..., 2010, Pan American Grain Co. filed notice of an appeal with the Secretary of Commerce (Secretary...

ATLAS WORLD-cloud and networking in PanDA

Science.gov (United States)

Barreiro Megino, F.; De, K.; Di Girolamo, A.; Maeno, T.; Walker, R.; ATLAS Collaboration

2017-10-01

The ATLAS computing model was originally designed as static clouds (usually national or geographical groupings of sites) around the Tier 1 centres, which confined tasks and most of the data traffic. Since those early days, the sites’ network bandwidth has increased at 0(1000) and the difference in functionalities between Tier 1s and Tier 2s has reduced. After years of manual, intermediate solutions, we have now ramped up to full usage of World-cloud, the latest step in the PanDA Workload Management System to increase resource utilization on the ATLAS Grid, for all workflows (MC production, data (re)processing, etc.). We have based the development on two new site concepts. Nuclei sites are the Tier 1s and large Tier 2s, where tasks will be assigned and the output aggregated, and satellites are the sites that will execute the jobs and send the output to their nucleus. PanDA dynamically pairs nuclei and satellite sites for each task based on the input data availability, capability matching, site load and network connectivity. This contribution will introduce the conceptual changes for World-cloud, the development necessary in PanDA, an insight into the network model and the first half-year of operational experience.

HEALTH INITIATIVES IN NATIONAL PAN-AMERICAN SWIMMING FEDERATIONS

Directory of Open Access Journals (Sweden)

Clarence Perez Diaz

Full Text Available ABSTRACT Introduction: National Swimming Federations (NFs supervise a large number of athletes and have the duty to protect their health that implies also the opportunity to improve public health. Objective: 1 To determine if the health professionals, the priorities, activities, and researches of the Pan-American NFs are focused on protecting athletes’ health and promoting the health of the population in general. 2 To determine if the FINA rules, projects and programs are applied. Method: A cross-sectional descriptive survey was carried out among the 45 Pan-American NFs requesting information on the profile of the health professionals (dimension 1; D1, on programs, activities and research to promote health measures (dimension 2; D2, and on the importance of Pan-American NFs for the health of athletes and for the promotion of health in society in general (dimension 3; D3. We performed a similarity study according to the Rogers-Tanimoto coefficient (D1 and D2 and the chi-squared test (χ² (D3. Results: Thirty NFs answered the survey (response rate: 66.6%. For each dimension, the NFs were classified into five groups (A, B, C, D, E. Among the NFs, 33.3% have physicians and 33.3% have physical therapists. In each of the dimensions, Group A accounted for the majority of NFs but their results were lower. The groups with the highest rates in each dimension contained a maximum of two NFs. The health of the elite athletes was ranked as the fourth most important issue. The health of the recreational athletes and the health of the general population had the lowest priority. Drowning prevention programs were the most common. Conclusions: Pan-American NFs have few medical resources and only a few have injury prevention programs for elite athletes. There is a need to improve health promotion programs to achieve relevant social outcomes.

Optimization of Pan Bread Prepared with Ramie Powder and Preservation of Optimized Pan Bread Treated by Gamma Irradiation during Storage

International Nuclear Information System (INIS)

Lee, H.J.; Joo, N.M.

2012-01-01

This study was conducted to develop an optimal composite recipe for pan bread with ramie powder that has high sensory approval with all age groups and to estimate the DPPH radical scavenging activity and the pan bread shelf life after gamma irradiation. The sensory evaluation results showed significant differences in flavor (p less than 0.05), appearance (p less than 0.01), color (p less than 0.01), moistness (p less than 0.01), and overall quality (p less than 0.05) based on the amount of ramie powder added. As a result, the optimum formulations by numerical and graphical methods were calculated to be as follows: ramie powder 2.76 g (0.92%) and water 184.7 mL. Optimized pan bread with ramie powder and white pan bread were irradiated with gamma-rays at doses of 0, 10, 15, and 20 kGy. The total bacterial growth increased with the longer storage time and the least amount of ramie powder added. Consequently, these results suggest that the addition of ramie powder to pan bread provides added value to the bread in terms of increased shelf life

Radioimmunodetection of human pancreatic tumor xenografts using DU-PAN II monoclonal antibody

International Nuclear Information System (INIS)

Nakamura, Kayoko; Kubo, Atsushi; Hashimoto, Shozo; Furuuchi, Takayuki; Abe, Osahiko; Takami, Hiroshi.

1988-01-01

The potential of DU-PAN II, monoclonal antibody (IgM), which was raised against the human tumor cell line, was evaluated for radioimmunodetection of human pancreatic tumors (PAN-5-JCK and EXP-58) grown in nude mice. 125 I-labeled DU-PAN II was accumulated into PAN-5-JCK producing DU-PAN II antigen with a tumor-to-blood ratio of 2.72 ± 3.00, but it did not localize in EXP-58 because of insufficient DU-PAN II. There was no significant uptake of 125 I-nonimmunized IgM in PAN-5-JCK. These facts indicated the specific tumor uptake of DU-PAN II. Excellent images of the tumor PAN-5-JCK were obtained 3 days after the injection of 125 I-DU-PAN II. Gel chromatography was also investigated with respect to the plasma taken from mice injected with antibody, or incubated with antibody in vitro. The results indicate that circulating antigen affected the tumor uptake of DU-PAN II: The more the tumor grew, the higher the amount of antigen excreted into the blood, leading to the degradation of DU-PAN II before it reached the tumor sites. Consequently, the immunoscintigram of the small tumor was remarkably clear. The catabolism and the radiolysis of the labeled IgM injected are critical points in applying immunoscintigraphy. (author)

PanViz: interactive visualization of the structure of functionally annotated pangenomes

DEFF Research Database (Denmark)

Pedersen, Thomas Lin; Nookaew, Intawat; Wayne Ussery, David

2017-01-01

with gene ontology based navigation of gene groups. Furthermore it allows for rich and complex visual querying of gene groups in the pangenome. PanViz visualizations require no external programs and are easily sharable, allowing for rapid pangenome analyses. PanViz is written entirely in Java......PanViz is a novel, interactive, visualization tool for pangenome analysis. PanViz allows visualization of changes in gene group (groups of similar genes across genomes) classification as different subsets of pangenomes are selected, as well as comparisons of individual genomes to pangenomes......Script and is available on https://github.com/thomasp85/PanViz A companion R package that facilitates the creation of PanViz visualizations from a range of data formats is released through Bioconductor and is available at https://bioconductor.org/packages/PanVizGenerator CONTACT: thomasp85@gmail...

The hydrochemistry of a semi-arid pan basin case study: Sua Pan, Makgadikgadi, Botswana

International Nuclear Information System (INIS)

Eckardt, Frank D.; Bryant, Robert G.; McCulloch, Graham; Spiro, Baruch; Wood, Warren W.

2008-01-01

This study presents results on the fluid and salt chemistry for the Makgadikgadi, a substantial continental basin in the semi-arid Kalahari. The aims of the study are to improve understanding of the hydrology of such a system and to identify the sources of the solutes and the controls on their cycling within pans. Sampling took place against the backdrop of unusually severe flooding as well as significant anthropogenic extraction of subsurface brines. This paper examines in particular the relationship between the chemistry of soil leachates, fresh stream water, salty lake water, surface salts and subsurface brines at Sua Pan, Botswana with the aim of improving the understanding of the system's hydrology. Occasionally during the short wet season (December-March) surface water enters the saline environment and precipitates mostly calcite and halite, as well as dolomite and traces of other salts associated with the desiccation of the lake. The hypersaline subsurface brine (up to TDS 190,000 mg/L) is homogenous with minor variations due to pumping by BotAsh mine (Botswana Ash (Pty) Ltd.), which extracts 2400 m 3 of brine/h from a depth of 38 m. Notable is the decrease in TDS as the pumping rate increases which may be indicative of subsurface recharge by less saline water. Isotope chemistry for Sr ( 87 Sr/ 86 Sr average 0.722087) and S (δ 34 S average 34.35) suggests subsurface brines have been subject to a lithological contribution of undetermined origin. Recharge of the subsurface brine from surface water including the Nata River appears to be negligible

Functional description of the monitoring and observability detailed concepts for the Pan-European Control Schemes

DEFF Research Database (Denmark)

Marinelli, Mattia; Pertl, Michael; Rezkalla, Michel M.N.

2017-01-01

Deliverable D5.4 outlines the methodology and the topics analysed in T5.4 for deriving PanEuropean observables within the Web-of-Cells (WoC) concept. Observables are derived by analysing traditional instability events typical of large power systems.......Deliverable D5.4 outlines the methodology and the topics analysed in T5.4 for deriving PanEuropean observables within the Web-of-Cells (WoC) concept. Observables are derived by analysing traditional instability events typical of large power systems....

Pan-African reactivation of the Lurio segment of the Kibaran Belt system: a reappraisal from recent age determinations in northern Mozambique

Science.gov (United States)

Sacchi, R.; Cadoppi, P.; Costa, M.

2000-04-01

The role of the Lurio Belt in northern Mozambique, and the geological evolution of its foreland in the Proterozoic are discussed in the light of recent, single zircon age determinations showing Pan-African age for the granulite-facies metamorphism. The following tentative conclusions are reached, and evidence for and against them is reviewed. The Lurio Belt had a two-fold history, as a crust-forming orogen during the Kibaran and as a transpressive suture in Pan-African times. Together with the Zambezi Belt and the Schlesien-Mwembeshi Lineament, it formed a 3000 km discontinuity which underwent an embryonic oceanic development before being sutured during the Pan-African collisional event. The Lurio Belt foreland had a tectonic-metamorphic evolution at ca 1000 Ma, prior to major, Pan-African overprinting and was probably continuous with the basement of Queen Maud Land (Antarctica) and Natal. In Pan-African times, clockwise transpressive movements along the Lurio Belt brought about emplacement of granulite klippen in its foreland. If there is a southward continuation of the Pan-African Mozambique Belt beyond Mozambique, it is probably to be found in Antarctica.

Evaluation of common methods for sampling invertebrate pollinator assemblages: net sampling out-perform pan traps.

Science.gov (United States)

Popic, Tony J; Davila, Yvonne C; Wardle, Glenda M

2013-01-01

Methods for sampling ecological assemblages strive to be efficient, repeatable, and representative. Unknowingly, common methods may be limited in terms of revealing species function and so of less value for comparative studies. The global decline in pollination services has stimulated surveys of flower-visiting invertebrates, using pan traps and net sampling. We explore the relative merits of these two methods in terms of species discovery, quantifying abundance, function, and composition, and responses of species to changing floral resources. Using a spatially-nested design we sampled across a 5000 km(2) area of arid grasslands, including 432 hours of net sampling and 1296 pan trap-days, between June 2010 and July 2011. Net sampling yielded 22% more species and 30% higher abundance than pan traps, and better reflected the spatio-temporal variation of floral resources. Species composition differed significantly between methods; from 436 total species, 25% were sampled by both methods, 50% only by nets, and the remaining 25% only by pans. Apart from being less comprehensive, if pan traps do not sample flower-visitors, the link to pollination is questionable. By contrast, net sampling functionally linked species to pollination through behavioural observations of flower-visitation interaction frequency. Netted specimens are also necessary for evidence of pollen transport. Benefits of net-based sampling outweighed minor differences in overall sampling effort. As pan traps and net sampling methods are not equivalent for sampling invertebrate-flower interactions, we recommend net sampling of invertebrate pollinator assemblages, especially if datasets are intended to document declines in pollination and guide measures to retain this important ecosystem service.

Activated carbon fiber obtained from textile PAN fiber to electrodes for supercapacitor

International Nuclear Information System (INIS)

Silva, Elen Leal da; Marcuzzo, Jossano Saldanha; Baldan, Mauricio Ribeiro; Cuna, Andres; Rodrigues, Aline Castilho; Goncalves, Emerson Sarmento

2016-01-01

Full text: Supercapacitors are devices for electrical energy storage with application in distribution power generation, electric vehicles, electronic equipment, among others. Current challenges in the development of supercapacitors focuses on making an increasing on system density of energy. An increase of energy accumulated in the supercapacitor electrode can be achieved by developing materials with high specific electrical capacitance and low electrical resistance. Furthermore, it is expected that the electrode material present a simple procedure for obtaining, low cost and environmentally friendly. Carbon fibers are interesting materials for use as a supercapacitor electrode. Among them are carbon fibers from polyacrylonitrile (PAN). In this work were studied activated carbon fibers obtained from textile polyacrylonitrile (ACF-PAN) with deposition of Fe particles aiming to use as active material of supercapacitor electrodes. ACFPAN and ACF-PAN-Fe were characterized by textural analysis, x-ray diffraction (XRD), scanning electron microscopy equipped with energy dispersive x-ray (SEM-EDX), Raman spectroscopy and x-ray photoelectron spectroscopy (XPS). The behavior of the activated carbon fibers as a supercapacitor electrode was evaluated by galvanostatic charge and discharge curves, cyclic voltammetry and a electrochemical impedance using a symmetrical two-electrode Swagelok®-type cell and sulfuric acid as electrolyte. ACF-PAN had a high specific surface area, which makes it an interesting material for electrodes of supercapacitors. The electrical capacitance for the ACF-PAN is 96 F/g and ACF-PAN-Fe is 106 F/g both at a current density of 0.30 A/g. This increase in electrical capacitance can be related to the presence of iron oxides which are deposited on the activated carbon fiber. (author)

Thermal and radiochemical degradation of some PAN copolymers

Energy Technology Data Exchange (ETDEWEB)

Jipa, S. [INCDIE, ICPE CA, 313 Splaiul Unirii, P.O. Box 149, Bucharest 030138 (Romania); ' Valachia' University of Targoviste, 18-22 Unirii Av., Targoviste 130082 (Romania); Zaharescu, T. [' Valachia' University of Targoviste, 18-22 Unirii Av., Targoviste 130082 (Romania)], E-mail: traian_zaharescu@yahoo.com; Setnescu, R. [INCDIE, ICPE CA, 313 Splaiul Unirii, P.O. Box 149, Bucharest 030138 (Romania); ' Valachia' University of Targoviste, 18-22 Unirii Av., Targoviste 130082 (Romania); Dragan, E.S.; Dinu, M.V. [' Petru Poni' Institute of Macromolecular Chemistry, Iasi 700487 (Romania)

2008-12-01

Polyacrylonitrile (PAN) and some copolymers of acrylonitrile with divinylbenzene (AN-DVB) were investigated by the characterization of their thermal and radiation stabilities. The contribution of DVB to the thermal stability of PAN by the modification in the amount of unsaturated hydrocarbon between 6 and 20% was revealed by the evaluation of oxidation induction periods and required activation energies. The exposure of these materials to the action of {gamma}-radiation points out the higher stability of copolymers (AN-DVB) in comparison to the relative stability of PAN.

Efficient oligonucleotide probe selection for pan-genomic tiling arrays

Directory of Open Access Journals (Sweden)

Zhang Wei

2009-09-01

Full Text Available Abstract Background Array comparative genomic hybridization is a fast and cost-effective method for detecting, genotyping, and comparing the genomic sequence of unknown bacterial isolates. This method, as with all microarray applications, requires adequate coverage of probes targeting the regions of interest. An unbiased tiling of probes across the entire length of the genome is the most flexible design approach. However, such a whole-genome tiling requires that the genome sequence is known in advance. For the accurate analysis of uncharacterized bacteria, an array must query a fully representative set of sequences from the species' pan-genome. Prior microarrays have included only a single strain per array or the conserved sequences of gene families. These arrays omit potentially important genes and sequence variants from the pan-genome. Results This paper presents a new probe selection algorithm (PanArray that can tile multiple whole genomes using a minimal number of probes. Unlike arrays built on clustered gene families, PanArray uses an unbiased, probe-centric approach that does not rely on annotations, gene clustering, or multi-alignments. Instead, probes are evenly tiled across all sequences of the pan-genome at a consistent level of coverage. To minimize the required number of probes, probes conserved across multiple strains in the pan-genome are selected first, and additional probes are used only where necessary to span polymorphic regions of the genome. The viability of the algorithm is demonstrated by array designs for seven different bacterial pan-genomes and, in particular, the design of a 385,000 probe array that fully tiles the genomes of 20 different Listeria monocytogenes strains with overlapping probes at greater than twofold coverage. Conclusion PanArray is an oligonucleotide probe selection algorithm for tiling multiple genome sequences using a minimal number of probes. It is capable of fully tiling all genomes of a species on

On linearity of pan-integral and pan-integrable functions space

Czech Academy of Sciences Publication Activity Database

Ouyang, Y.; Li, J.; Mesiar, Radko

2017-01-01

Roč. 90, č. 1 (2017), s. 307-318 ISSN 0888-613X Institutional support: RVO:67985556 Keywords : linearity * monotone measure * Pan-integrable space Subject RIV: BA - General Mathematics OBOR OECD: Pure mathematics Impact factor: 2.845, year: 2016 http://library.utia.cas.cz/separaty/2017/E/mesiar-0477549.pdf

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

Directory of Open Access Journals (Sweden)

Gregory P. Way

2018-04-01

Full Text Available Summary: Precision oncology uses genomic evidence to match patients with treatment but often fails to identify all patients who may respond. The transcriptome of these “hidden responders” may reveal responsive molecular states. We describe and evaluate a machine-learning approach to classify aberrant pathway activity in tumors, which may aid in hidden responder identification. The algorithm integrates RNA-seq, copy number, and mutations from 33 different cancer types across The Cancer Genome Atlas (TCGA PanCanAtlas project to predict aberrant molecular states in tumors. Applied to the Ras pathway, the method detects Ras activation across cancer types and identifies phenocopying variants. The model, trained on human tumors, can predict response to MEK inhibitors in wild-type Ras cell lines. We also present data that suggest that multiple hits in the Ras pathway confer increased Ras activity. The transcriptome is underused in precision oncology and, combined with machine learning, can aid in the identification of hidden responders. : Way et al. develop a machine-learning approach using PanCanAtlas data to detect Ras activation in cancer. Integrating mutation, copy number, and expression data, the authors show that their method detects Ras-activating variants in tumors and sensitivity to MEK inhibitors in cell lines. Keywords: Gene expression, machine learning, Ras, NF1, KRAS, NRAS, HRAS, pan-cancer, TCGA, drug sensitivity

Preparation and performance of biofouling resistant PAN/chitosan hollow fiber membranes.

Science.gov (United States)

Shanthana Lakshmi, D; Jaiswar, Santlal; Saxena, Mayank; Tasselli, Franco; Raval, Hiren D

2017-07-01

The preparation of polyacrylonitrile (PAN) hollow fiber (HF) membranes has been carried out by dry-jet wet spinning. PAN HF membranes were coated with chitosan biopolymers 2 wt% by dip coating and further crosslinked by chemical reagents (Tri sodium polyphosphate). PAN HF (Virgin) and PAN/chitosan coated membrane were characterized by SEM and tested for water flux. Proteins Pepsin, Albumin, and Clay of 1000 ppm concentration were tested for separation efficiency. In addition, bacterial species Escherichia coli and Bacillus subtilis were tested for fouling control efficiency and found out that PAN/chitosan membranes were quite superior to virgin PAN fibers. The adhesion of bacterial cells on the surface of the hollow fiber membranes assessed through alcian blue staining and SEM analysis. It was observed that PAN/chitosan membranes (310A and 310C) possessed best antibacterial activities (based on SEM results), qualifying them as a very promising candidates for anti-biofouling coatings.

A Peptide-Fc Opsonin with Pan-Amyloid Reactivity

Directory of Open Access Journals (Sweden)

James S. Foster

2017-09-01

Full Text Available There is a continuing need for therapeutic interventions for patients with the protein misfolding disorders that result in systemic amyloidosis. Recently, specific antibodies have been employed to treat AL amyloidosis by opsonizing tissue amyloid deposits thereby inducing cell-mediated dissolution and organ improvement. To develop a pan-amyloid therapeutic agent, we have produced an Fc-fusion product incorporating a peptide, p5, which binds many if not all forms of amyloid. This protein, designated Fcp5, expressed in mammalian cells, forms the desired bivalent dimer structure and retains pan-amyloid reactivity similar to the p5 peptide as measured by immunosorbent assays, immunohistochemistry, surface plasmon resonance, and pulldown assays using radioiodinated Fcp5. Additionally, Fcp5 was capable of opsonizing amyloid fibrils in vitro using a pH-sensitive fluorescence assay of phagocytosis. In mice,125 I-labeled Fcp5 exhibited an extended serum circulation time, relative to the p5 peptide. It specifically bound AA amyloid deposits in diseased mice, as evidenced by biodistribution and microautoradiographic methods, which coincided with an increase in active, Iba-1-positive macrophages in the liver at 48 h postinjection of Fcp5. In healthy mice, no specific tissue accumulation was observed. The data indicate that polybasic, pan-amyloid-targeting peptides, in the context of an Fc fusion, can yield amyloid reactive, opsonizing reagents that may serve as next-generation immunotherapeutics.

Microstructural characterization of PAN based carbon fiber reinforced nylon 6 polymer composites

Science.gov (United States)

Munirathnamma, L. M.; Ningaraju, S.; Kumar, K. V. Aneesh; Ravikumar, H. B.

2018-04-01

Microstructural characterization of nylon 6/polyacrolonitrile based carbon fibers (PAN-CFs) of 10 to 40 wt% has been performed by positron lifetime technique (PLT). The positron lifetime parameters viz., o-Ps lifetime (τ3), o-Ps intensity (I3) and fractional free volume (Fv) of nylon 6/PAN-CF composites are correlated with the mechanical properties viz., Tensile strength and Young's modulus. The Fv show negative deviation with the reinforcement of 10 to 40 wt% of PAN-CF from the linear additivity relation. The negative deviation in nylon 6/PAN-CF composite suggests the induced molecular packing due to the chemical interaction between the polymeric chains of nylon 6 and PAN-CF. This is evident from Fourier Transform Infrared Spectrometry (FTIR) studies. The FTIR results suggests that observed negative deviation in PALS results of nylon 6/PAN-CF reinforced polymer composites is due to the induced chemical interaction at N-H-O sites. The improved tensile strength (TS) and Young's modulus (YM) in nylon 6/PAN-CF reinforced polymer composites is due to AS4C (surface treated and epoxy coated) PAN-CF has shown highest adhesion level due to better stress transfer between nylon 6 and PAN-CF.

Nuclear security in major public events: the XV Pan American Games and the III Para-Pan American Games in Brazil

International Nuclear Information System (INIS)

Mello, Luiz A. de; Monteiro Filho, Joselio S.; Belem, Lilia M.J.; Torres, Luiz F.B.

2009-01-01

The organization of a major public event involving large numbers of spectators and participants, presents important security challenges. Taking this into consideration, the Brazilian Nuclear Energy Commission (CNEN) has been requested, by the National Secretary of Public Security/ Ministry of Justice (SENASP/MJ), by the end of 2006, to participate on the security actions to be implemented in both the XV Pan American Games and III Para Pan American Games. The XV Pan American Games 2007 and the III Para Pan American Games were held in Rio de Janeiro, Brazil from 13 to 29 July 2007 and from 12 to 19 August 2007, respectively. Those events had 8700 participants between athletes, coaches and referees from 42 countries. More than 300 competition events were held at 17 different venues and were covered by 4910 professionals from TV, radio and written press. Around 2 million tickets have been sold or distributed and 18,000 volunteers participated on the organization. The participation of CNEN was concentrated on the implementation of specific nuclear and radiological security measures to be applied at those events. This was part of a multi-institutional plan for the security of the Games, coordinated by the National Secretary of Public Security of the Ministry of Justice (SENASP/MJ). The support provided by IAEA under a Cooperation Arrangement with the Brazilian authorities was a key factor for the success of the whole operation. The actions taken and the lessons identified by the Brazilian Nuclear Energy Commission related to nuclear and radiological security for the Pan American Games and for the Para Pan American Games are presented. (author)

A new type of coil structure called pan-shaped coil of wireless charging system based on magnetic resonance

Science.gov (United States)

Yue, Z. K.; Liu, Z. Z.; Hou, Y. J.; Zeng, H.; Liang, L. H.; Cui, S.

2017-11-01

The problem that misalignment between the transmitting coil and the receiving coil significantly impairs the transmission power and efficiency of the system has been attached more and more attention. In order to improve the uniformity of the magnetic field between the two coils to solve this problem, a new type of coil called pan-shaped coil is proposed. Three-dimension simulation models of the planar-core coil and the pan-shaped coil are established using Ansoft Maxwell software. The coupling coefficient between the transmitting coil and the receiving coil is obtained by simulating the magnetic field with the receiving coil misalignment or not. And the maximum percentage difference strength along the radial direction which is defined as the magnetic field uniformity factor is calculated. According to the simulation results of the two kinds of coil structures, it is found that the new type of coil structure can obviously improve the uniformity of the magnetic field, coupling coefficient and power transmission properties between the transmitting coil and the receiving coil.

Evaluation of common methods for sampling invertebrate pollinator assemblages: net sampling out-perform pan traps.

Directory of Open Access Journals (Sweden)

Tony J Popic

Full Text Available Methods for sampling ecological assemblages strive to be efficient, repeatable, and representative. Unknowingly, common methods may be limited in terms of revealing species function and so of less value for comparative studies. The global decline in pollination services has stimulated surveys of flower-visiting invertebrates, using pan traps and net sampling. We explore the relative merits of these two methods in terms of species discovery, quantifying abundance, function, and composition, and responses of species to changing floral resources. Using a spatially-nested design we sampled across a 5000 km(2 area of arid grasslands, including 432 hours of net sampling and 1296 pan trap-days, between June 2010 and July 2011. Net sampling yielded 22% more species and 30% higher abundance than pan traps, and better reflected the spatio-temporal variation of floral resources. Species composition differed significantly between methods; from 436 total species, 25% were sampled by both methods, 50% only by nets, and the remaining 25% only by pans. Apart from being less comprehensive, if pan traps do not sample flower-visitors, the link to pollination is questionable. By contrast, net sampling functionally linked species to pollination through behavioural observations of flower-visitation interaction frequency. Netted specimens are also necessary for evidence of pollen transport. Benefits of net-based sampling outweighed minor differences in overall sampling effort. As pan traps and net sampling methods are not equivalent for sampling invertebrate-flower interactions, we recommend net sampling of invertebrate pollinator assemblages, especially if datasets are intended to document declines in pollination and guide measures to retain this important ecosystem service.

75 FR 61698 - Federal Consistency Appeal by Pan American Grain Co.

Science.gov (United States)

2010-10-06

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY: National Oceanic and Atmospheric Administration (NOAA), Department... Commerce (Secretary) by Pan American Grain Co. (Pan American) has closed. No additional information, briefs...

Effects of plough pan development on surface hydrology and on soil physical properties in Southeastern Brazilian plateau

Science.gov (United States)

Bertolino, Ana V. F. A.; Fernandes, Nelson F.; Miranda, João P. L.; Souza, Andréa P.; Lopes, Marcel R. S.; Palmieri, Francesco

2010-10-01

SummaryConventional tillage may impose changes in soil physical properties that lead to a decrease in soil physical quality. Although plough pan formation is considered to be an important consequence of conventional tillage practices in Southeastern Brazil, few studies have focused on its hydrological consequences. Detailed investigations in two experimental plots located in the hilly landscape of Serra do Mar close to Rio de Janeiro city were carried out to characterize the changes in soil physical properties and in soil hydrology due to plough pan formation. Conventional (CT) and minimum tillage (MT) practices were implemented in two plots for 3 years and soil matric potential (SMP) was monitored in each plot via nests of tensiometers and Watermark® sensors installed at different depths. Undisturbed soil blocks were collected for micromorphological analyses to quantify the total pore space in soils under CT and MT systems, and in soils under natural tropical forest. Results suggest that soils under the CT system developed a plough pan layer at about 20 cm depth that had 44% less total porosity as compared to surface conditions. It is shown that soils under the CT system tended to stay saturated for longer periods of time after each rainfall event. Besides, during intense rainy periods soils under the CT system may develop hydrologic conditions that favor lateral flows while soils under the MT system were still draining. Such hydrological responses may explain why average soil erosion rates measured for individual rainfall events under the CT system were about 2.5 times greater than the ones observed at MT. The results attested that conventional tillage in this area generated modifications in soil fabric, especially in pore-size distribution and connectivity, which induced important changes in soil hydrology and soil erosion. The agricultural practices used in this area, associated with the local steep hillslopes and intense rainfall events, are definitely not

Evaluation of water balance parameters from isotopic measurements in evaporation pans

International Nuclear Information System (INIS)

Allison, G.B.

1979-01-01

The evaluation of the parameters governing the isotopic composition of evaporating water bodies was attempted by means of evaporation pans. The instability of the meteorological conditions, however, makes it virtually impossible to evaluate the atmospheric relative humidity and its isotopic composition with pans. Pans are only suitable to obtain seasonal trends of the isotopic composition of the net evaporated water. For this, a technique based on two pans is also proposed. (author)

The Pan-STARRS1 Surveys

Science.gov (United States)

Chambers, Kenneth; Pan-STARRS Team

2018-01-01

The Pan-STARRS1 Surveys are complete and the first data release, DR1, is available from the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute. The data include a database of measured attributes of 3 billion objects, stacked images, and metadata of the 3pi Steradian Survey. The DR1 contains all stationary objects with mean and stack photometry registered on the GAIA astrometric frame. DR2 is in preparation and will be released this winter with all the individual epoch images and time domain photometry and forced photometry on the individual epoch images. The characteristics of the Pan-STARRS1 Surveys will be presented, including image quality, depth, cadence, and coverage. Measured attributes include PSF model magnitudes, aperture magnitudes, Kron Magnitudes, radial moments, Petrosian magnitudes, DeVaucoulers, Exponential, and Sersic magnitudes for extended objects. Images include total intensity, variance, and masks.An overview of the Pan-STARRS1 Surveys and data releases will be presented together with a brief description of the data collected since the end of the PS1 Science Consortium surveys, and the plans for the upcoming survey with PS1 and PS2 begining in February 2018.

PanCoreGen - Profiling, detecting, annotating protein-coding genes in microbial genomes.

Science.gov (United States)

Paul, Sandip; Bhardwaj, Archana; Bag, Sumit K; Sokurenko, Evgeni V; Chattopadhyay, Sujay

2015-12-01

A large amount of genomic data, especially from multiple isolates of a single species, has opened new vistas for microbial genomics analysis. Analyzing the pan-genome (i.e. the sum of genetic repertoire) of microbial species is crucial in understanding the dynamics of molecular evolution, where virulence evolution is of major interest. Here we present PanCoreGen - a standalone application for pan- and core-genomic profiling of microbial protein-coding genes. PanCoreGen overcomes key limitations of the existing pan-genomic analysis tools, and develops an integrated annotation-structure for a species-specific pan-genomic profile. It provides important new features for annotating draft genomes/contigs and detecting unidentified genes in annotated genomes. It also generates user-defined group-specific datasets within the pan-genome. Interestingly, analyzing an example-set of Salmonella genomes, we detect potential footprints of adaptive convergence of horizontally transferred genes in two human-restricted pathogenic serovars - Typhi and Paratyphi A. Overall, PanCoreGen represents a state-of-the-art tool for microbial phylogenomics and pathogenomics study. Copyright © 2015 Elsevier Inc. All rights reserved.

Towards a holistic review of Pan-Africanism: linking the idea and the movement.

Science.gov (United States)

Young, Kurt B

2010-01-01

This article explores two general approaches to defining Pan-Africanism. Traditional Pan-Africanism reflects definitions of Pan-Africanism that begin with the assumption that distinctions must be made between early "ideas" of group identification with Africa versus modern organizational activities. However, holistic approaches emphasize the interconnectivity of Pan-African ideas and concrete activities. This discussion explores these approaches and their implications for contemporary analyses of Pan-Africanism. The essay concludes that the holistic line is best suited for developing a new model in Pan-Africanism.

Damage symptoms of plants due to PAN exposure

Energy Technology Data Exchange (ETDEWEB)

Nouchi, I; Sawada, T; Ohashi, T; Odaira, T

1974-11-01

In order to identify the cause of plant damage which differed from that by ozone, a series of exposure experiments was carried out on Beta vulgaris, Japanese radish, French bean, luthern, tomato, and spinach in a controlled weather room by artificially synthesized PAN (peroxyacetyl nitrate). The damage appeared generally on younger leaves as a lustering and bronzing on the lower surface; there was a specific symptom in which the interveinary part of the lower surface depressed, leaving the veins in relief. At higher concentrations of PAN, damages appeared on the upper surface of leaves, however, bronzing and lustering were clearer during exposure to lower concentrations of PAN. The position of the leaves and the part of a leaf which was damaged were constant in the petunia, morning glory, and tobacco. There was a hyperbolic relationship between the concentration of PAN and the time period of appearance of the damage as was seen during sulfur dioxide and ozone exposures.

In-air PIXE for analyzing heavy metals in water boiled in pans

International Nuclear Information System (INIS)

Tomita, M.; Haruyama, Y.; Saito, M.

1993-01-01

The release rates of heavy metals from pans were measured for boiling water as well as for an acidic solution prior to an investigation on the release or sorption of trace elements due to cooking of food by boiling. The boiled samples were condensed and analyzed by means of in-air PIXE. The release of heavy metals was measured for five kinds of pans. For all pans the release rates were considerably more increased by boiling of a 5% solution of acetic acid. Furthermore it was found that by using the alumina coated aluminum pan (alumina pan) the respective release rates of Fe, Cu and Zn were all less than 50 μg per 100 cm 2 of the pan surface dipped in the solution, and that monitoring of the contents of aluminum in the boiled solution enabled the estimation of the contribution of metal elements from the pan wall. (orig.)

PanDA: Exascale Federation of Resources for the ATLAS Experiment

CERN Document Server

Barreiro Megino, Fernando Harald; The ATLAS collaboration; Maeno, Tadashi; Wenaus, Torre; Nilsson, Paul; Klimentov, Alexei; Oleynik, Danila; Panitkin, Sergey; Petrosyan, Artem; Vukotic, Ilija

2015-01-01

After a scheduled maintenance and upgrade period, the world’s largest and most powerful machine - the Large Hadron Collider(LHC) - is about to enter its second run at unprecedented energies. In order to exploit the scientific potential of the ma- chine, the experiments at the LHC face computational challenges with enormous data volumes that need to be analysed by thousand of physics users and compared to simulated data. Given diverse funding constraints, the computational resources for the LHC have been deployed in a worldwide mesh of data centres, connected to each other through Grid technologies. The PanDA (Production and Distributed Analysis) system was developed in 2005 for the ATLAS experiment on top of this heterogeneous infrastructure to seamlessly integrate the computational resources and give the users the feeling of a unique system. Since its origins, PanDA has evolved together with upcoming computing paradigms in and outside HEP, such as changes in the networking model, cloud computing and HPC. I...

The Pan-STARRS1 Survey Data Release

Science.gov (United States)

Chambers, Kenneth C.; Pan-STARRS Team

2017-01-01

The first Pan-STARRS1 Science Mission is complete and an initial Data Release 1, or DR1, including a database of measured attributes, stacked images, and metadata of the 3PI Survey, will be available from the STScI MAST archive. This release will contain all stationary objects with mean and stack photometry registered on the GAIA astrometric frame.The characteristics of the Pan-STARRS1 Surveys will be presented, including image quality, depth, cadence, and coverage. Measured attributes include PSF model magnitudes, aperture magnitudes, Kron Magnitudes, radial moments, Petrosian magnitudes, DeVaucoulers, Exponential, and Sersic magnitudes for extended objects. Images include total intensity, variance, and masks.An overview of both DR1 and the second data release DR2, to follow in the spring of 2017, will be presented. DR2 will add all time domain data and individual warped images. We will also report on the status of the Pan-STARRS2 Observatory and ongoing science with Pan-STARRS. The science from the PS1 surveys has included results in many t fields of astronomy from Near Earth Objects to cosmology.The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics and Space Administration under Grants No. NNX08AR22G, NNX12AR65G, NNX14AM74G issued through the Planetary Science Division of the NASA Science Mission Directorate; the National Science Foundation under Grant No. AST

Sampling bee communities using pan traps: alternative methods increase sample size

Science.gov (United States)

Monitoring of the status of bee populations and inventories of bee faunas require systematic sampling. Efficiency and ease of implementation has encouraged the use of pan traps to sample bees. Efforts to find an optimal standardized sampling method for pan traps have focused on pan trap color. Th...

Compilation of PRF Canyon Floor Pan Sample Analysis Results

Energy Technology Data Exchange (ETDEWEB)

Pool, Karl N. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Minette, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wahl, Jon H. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Greenwood, Lawrence R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Coffey, Deborah S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); McNamara, Bruce K. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bryan, Samuel A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Scheele, Randall D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Delegard, Calvin H. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Sinkov, Sergey I. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Soderquist, Chuck Z. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fiskum, Sandra K. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Brown, Garrett N. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Clark, Richard A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

2016-06-30

On September 28, 2015, debris collected from the PRF (236-Z) canyon floor, Pan J, was observed to exhibit chemical reaction. The material had been transferred from the floor pan to a collection tray inside the canyon the previous Friday. Work in the canyon was stopped to allow Industrial Hygiene to perform monitoring of the material reaction. Canyon floor debris that had been sealed out was sequestered at the facility, a recovery plan was developed, and drum inspections were initiated to verify no additional reactions had occurred. On October 13, in-process drums containing other Pan J material were inspected and showed some indication of chemical reaction, limited to discoloration and degradation of inner plastic bags. All Pan J material was sealed back into the canyon and returned to collection trays. Based on the high airborne levels in the canyon during physical debris removal, ETGS (Encapsulation Technology Glycerin Solution) was used as a fogging/lock-down agent. On October 15, subject matter experts confirmed a reaction had occurred between nitrates (both Plutonium Nitrate and Aluminum Nitrate Nonahydrate (ANN) are present) in the Pan J material and the ETGS fixative used to lower airborne radioactivity levels during debris removal. Management stopped the use of fogging/lock-down agents containing glycerin on bulk materials, declared a Management Concern, and initiated the Potential Inadequacy in the Safety Analysis determination process. Additional drum inspections and laboratory analysis of both reacted and unreacted material are planned. This report compiles the results of many different sample analyses conducted by the Pacific Northwest National Laboratory on samples collected from the Plutonium Reclamation Facility (PRF) floor pans by the CH2MHill’s Plateau Remediation Company (CHPRC). Revision 1 added Appendix G that reports the results of the Gas Generation Rate and methodology. The scope of analyses requested by CHPRC includes the determination of

A quantification method for peroxyacetyl nitrate (PAN) using gas chromatography (GC) with a non-radioactive pulsed discharge detector (PDD)

Science.gov (United States)

Zhang, Lei; Jaffe, Daniel A.; Gao, Xin; McClure, Crystal D.

2018-04-01

In this study, we developed a method for continuous PAN measurements by gas chromatography (GC) with a non-radioactive pulsed discharge detector (PDD). Operational parameters were optimized based on the ratio of peak height over baseline noise (P/N ratio). The GC/PDD system was compared with a traditional radioactive electron-capture detector (ECD). In the lab, the method detection limit (MDL) of the new GC/PDD method (9 pptv) was lower than the radioactive GC/ECD method (15 pptv), demonstrating its excellent potential. The MDL of GC/PDD in the field campaign at the Mt. Bachelor Observatory (MBO) was 23 pptv, higher than in the lab. This was caused in part by the decreased slope of the calibration curve resulting from the low air pressure level at MBO. However, the MDL level of GC/PDD at MBO is still low enough for accurate PAN measurements, although special attention should be paid to its application at high-elevation sites. Observations of PAN were conducted at MBO in the summer of 2016 with the GC/PDD system, and provided more evidence of the performance of the system. PAN was found to be highly correlated with CO. The promising performance of GC/PDD which does not require a radioactive source makes it a useful approach for accurate PAN measurements in the field.

Twin-cuvette measurement technique for investigation of dry deposition of O3 and PAN to plant leaves under controlled humidity conditions

Science.gov (United States)

Sun, Shang; Moravek, Alexander; von der Heyden, Lisa; Held, Andreas; Sörgel, Matthias; Kesselmeier, Jürgen

2016-02-01

We present a dynamic twin-cuvette system for quantifying the trace-gas exchange fluxes between plants and the atmosphere under controlled temperature, light, and humidity conditions. Compared with a single-cuvette system, the twin-cuvette system is insensitive to disturbing background effects such as wall deposition. In combination with a climate chamber, we can perform flux measurements under constant and controllable environmental conditions. With an Automatic Temperature Regulated Air Humidification System (ATRAHS), we are able to regulate the relative humidity inside both cuvettes between 40 and 90 % with a high precision of 0.3 %. Thus, we could demonstrate that for a cuvette system operated with a high flow rate (> 20 L min-1), a temperature-regulated humidification system such as ATRAHS is an accurate method for air humidification of the flushing air. Furthermore, the fully automatic progressive fill-up of ATRAHS based on a floating valve improved the performance of the entire measurement system and prevented data gaps. Two reactive gas species, ozone (O3) and peroxyacetyl nitrate (PAN), were used to demonstrate the quality and performance of the twin-cuvette system. O3 and PAN exchange with Quercus ilex was investigated over a 14 day measurement period under controlled climate chamber conditions. By using O3 mixing ratios between 32 and 105 ppb and PAN mixing ratios between 100 and 350 ppt, a linear dependency of the O3 flux as well as the PAN flux in relation to its ambient mixing ratio could be observed. At relative humidity (RH) of 40 %, the deposition velocity ratio of O3 and PAN was determined to be 0.45. At that humidity, the deposition of O3 to the plant leaves was found to be only controlled by the leaf stomata. For PAN, an additional resistance inhibited the uptake of PAN by the leaves. Furthermore, the formation of water films on the leaf surface of plants inside the chamber could be continuously tracked with our custom built leaf wetness sensors

Pan-sharpening via compressed superresolution reconstruction and multidictionary learning

Science.gov (United States)

Shi, Cheng; Liu, Fang; Li, Lingling; Jiao, Licheng; Hao, Hongxia; Shang, Ronghua; Li, Yangyang

2018-01-01

In recent compressed sensing (CS)-based pan-sharpening algorithms, pan-sharpening performance is affected by two key problems. One is that there are always errors between the high-resolution panchromatic (HRP) image and the linear weighted high-resolution multispectral (HRM) image, resulting in spatial and spectral information lost. The other is that the dictionary construction process depends on the nontruth training samples. These problems have limited applications to CS-based pan-sharpening algorithm. To solve these two problems, we propose a pan-sharpening algorithm via compressed superresolution reconstruction and multidictionary learning. Through a two-stage implementation, compressed superresolution reconstruction model reduces the error effectively between the HRP and the linear weighted HRM images. Meanwhile, the multidictionary with ridgelet and curvelet is learned for both the two stages in the superresolution reconstruction process. Since ridgelet and curvelet can better capture the structure and directional characteristics, a better reconstruction result can be obtained. Experiments are done on the QuickBird and IKONOS satellites images. The results indicate that the proposed algorithm is competitive compared with the recent CS-based pan-sharpening methods and other well-known methods.

Microbial comparative pan-genomics using binomial mixture models

Directory of Open Access Journals (Sweden)

Ussery David W

2009-08-01

Full Text Available Abstract Background The size of the core- and pan-genome of bacterial species is a topic of increasing interest due to the growing number of sequenced prokaryote genomes, many from the same species. Attempts to estimate these quantities have been made, using regression methods or mixture models. We extend the latter approach by using statistical ideas developed for capture-recapture problems in ecology and epidemiology. Results We estimate core- and pan-genome sizes for 16 different bacterial species. The results reveal a complex dependency structure for most species, manifested as heterogeneous detection probabilities. Estimated pan-genome sizes range from small (around 2600 gene families in Buchnera aphidicola to large (around 43000 gene families in Escherichia coli. Results for Echerichia coli show that as more data become available, a larger diversity is estimated, indicating an extensive pool of rarely occurring genes in the population. Conclusion Analyzing pan-genomics data with binomial mixture models is a way to handle dependencies between genomes, which we find is always present. A bottleneck in the estimation procedure is the annotation of rarely occurring genes.

THE PHOTOMETRIC CLASSIFICATION SERVER FOR Pan-STARRS1

International Nuclear Information System (INIS)

Saglia, R. P.; Bender, R.; Seitz, S.; Senger, R.; Snigula, J.; Phleps, S.; Wilman, D.; Tonry, J. L.; Burgett, W. S.; Chambers, K. C.; Heasley, J. N.; Kaiser, N.; Magnier, E. A.; Morgan, J. S.; Greisel, N.; Bailer-Jones, C. A. L.; Klement, R. J.; Rix, H.-W.; Smith, K.; Green, P. J.

2012-01-01

The Pan-STARRS1 survey is obtaining multi-epoch imaging in five bands (g P1 r P1 i P1 z P1 y P1 ) over the entire sky north of declination –30 deg. We describe here the implementation of the Photometric Classification Server (PCS) for Pan-STARRS1. PCS will allow the automatic classification of objects into star/galaxy/quasar classes based on colors and the measurement of photometric redshifts for extragalactic objects, and will constrain stellar parameters for stellar objects, working at the catalog level. We present tests of the system based on high signal-to-noise photometry derived from the Medium-Deep Fields of Pan-STARRS1, using available spectroscopic surveys as training and/or verification sets. We show that the Pan-STARRS1 photometry delivers classifications and photometric redshifts as good as the Sloan Digital Sky Survey (SDSS) photometry to the same magnitude limits. In particular, our preliminary results, based on this relatively limited data set down to the SDSS spectroscopic limits, and therefore potentially improvable, show that stars are correctly classified as such in 85% of cases, galaxies in 97%, and QSOs in 84%. False positives are less than 1% for galaxies, ≈19% for stars, and ≈28% for QSOs. Moreover, photometric redshifts for 1000 luminous red galaxies up to redshift 0.5 are determined to 2.4% precision (defined as 1.48 × Median|z phot – z spec |/(1 + z)) with just 0.4% catastrophic outliers and small (–0.5%) residual bias. For bluer galaxies up to the same redshift, the residual bias (on average –0.5%) trend, percentage of catastrophic failures (1.2%), and precision (4.2%) are higher, but still interestingly small for many science applications. Good photometric redshifts (to 5%) can be obtained for at most 60% of the QSOs of the sample. PCS will create a value-added catalog with classifications and photometric redshifts for eventually many millions of sources.

Radiological Protection Measurements Implemented during the 16. Pan American and 4. ParaPan American Games: Guadalajara, Mexico, 2011

International Nuclear Information System (INIS)

2014-02-01

Terrorism remains a threat to international stability and security. Often national and international high level public events are the subject of much public interest and receive extensive coverage in the media. In this sense, it is well known that there is a real threat of a terrorist attack in important public events, such as major economic summits, high level political meetings or sporting events. In 1955 and 1975, the 2nd and 7th Pan American Games were organized by the City of Mexico. In 2011, the Pan American Games was the third event of its kind held in Guadalajara, Jalisco. At the national level, the implementation of nuclear security measures in the Pan American Games laid the foundations for a sustainable national nuclear security framework that will continue long after the event. The political decision, the existing legal basis and structure, agency coordination facilitated the incorporation of nuclear security measures. It was also a challenge to integrate all the relevant organizations, provide focus to the threat of terrorism linked to weapons of mass destruction for security games, plan resources and execute the project on time, among other details. For this reason, information and lessons learned that are reported in this document, received in Mexico during the 16th edition of the Pan American Games will be useful for the implementation of nuclear security measures in States with similar situations

The core proteome and pan proteome of Salmonella Paratyphi A epidemic strains.

Directory of Open Access Journals (Sweden)

Li Zhang

Full Text Available Comparative proteomics of the multiple strains within the same species can reveal the genetic variation and relationships among strains without the need to assess the genomic data. Similar to comparative genomics, core proteome and pan proteome can also be obtained within multiple strains under the same culture conditions. In this study we present the core proteome and pan proteome of four epidemic Salmonella Paratyphi A strains cultured under laboratory culture conditions. The proteomic information was obtained using a Two-dimensional gel electrophoresis (2-DE technique. The expression profiles of these strains were conservative, similar to the monomorphic genome of S. Paratyphi A. Few strain-specific proteins were found in these strains. Interestingly, non-core proteins were found in similar categories as core proteins. However, significant fluctuations in the abundance of some core proteins were also observed, suggesting that there is elaborate regulation of core proteins in the different strains even when they are cultured in the same environment. Therefore, core proteome and pan proteome analysis of the multiple strains can demonstrate the core pathways of metabolism of the species under specific culture conditions, and further the specific responses and adaptations of the strains to the growth environment.

Pan Eurasian EXperiment (PEEX) - towards a new multinational environment and climate research effort in Eurasia

Science.gov (United States)

Petäjä, Tuukka; Kulmala, Markku; Lappalainen, Hanna; Sipilä, Mikko; Sorvari, Sanna; Alekseychik, Pavel; Paramonov, Mikhail; Kerminen, Veli-Matti; Zilitinkevich, Sergej

2013-04-01

Boreal forests are a substantial source of greenhouse gases, biogenic volatile organic compounds (BVOCs) and natural aerosols, the critical atmospheric components related to climate change processes. A large fraction of boreal forests of the world is situated in Siberian region. Representative measurements of carbon dioxide (CO2) and methane (CH4) concentrations, BVOC emissions and aerosols production from Siberian are of special importance when estimating global budgets of climate change relevant factors. The scope of a new concept of the Pan Eurasian Experiment (PEEX) is to set up a process for planning of a large-scale, long-term, coordinated observations and modeling experiment in the Pan Eurasian region, especially to cover ground base, airborne and satellite observations together with global and regional models to find out different forcing and feedback mechanisms in the changing climate. University of Helsinki together with Finnish Meteorological institute are organizing the Pan-Eurasian Experiment and to gather all the European and Russian key players in the field of climate and Earth system science to plan the future research activities in the Pan-Eurasian region. In the European scale PEEX is part of the JPI Climate Fast Track Activity 1.3. "Changing cryosphere in the climate system - from observations to climate modeling". PEEX research topics are closely related the NordForsk's Top Research Initiative CRAICC - Cryosphere - atmosphere interaction in the changing Arctic climate. PEEX is also a central part of the ongoing the Finnish Cultural Foundation - Earth System modeling Working Group activity (2012-2013). PEEX scientific aims and future actions to develop Pan Eurasian research infrastructure can be linked to several EC and ESA funded activities aiming to develop next generation research infrastructures and data products: EU-FP7-ACTRIS-I3-project (Aerosols, Clouds, and Trace gases Research InfraStructure Network-project 2011-2015); ICOS a research

Clash of pans: pan-Africanism and pan-Anglo-Saxonism and the global colour line, 1919–1945

OpenAIRE

Ledwidge, M.; Parmar, I.

2017-01-01

The article demonstrates both conceptually and empirically that pan-Anglo-Saxonist knowledge networks reconstructed and reimagined an apparently de-racialised, scientific, sober and liberal world order that outwardly abandoned, but did not eradicate the twin phenomena of racism and imperialism. Rather the new liberal (imperial) internationalists, organised in newly formed “think tanks” such as Chatham House and the Council on Foreign Relations, and through their increasingly global elite netw...

PanCoreGen – profiling, detecting, annotating protein-coding genes in microbial genomes

Science.gov (United States)

Bhardwaj, Archana; Bag, Sumit K; Sokurenko, Evgeni V.

2015-01-01

A large amount of genomic data, especially from multiple isolates of a single species, has opened new vistas for microbial genomics analysis. Analyzing pan-genome (i.e. the sum of genetic repertoire) of microbial species is crucial in understanding the dynamics of molecular evolution, where virulence evolution is of major interest. Here we present PanCoreGen – a standalone application for pan- and core-genomic profiling of microbial protein-coding genes. PanCoreGen overcomes key limitations of the existing pan-genomic analysis tools, and develops an integrated annotation-structure for species-specific pan-genomic profile. It provides important new features for annotating draft genomes/contigs and detecting unidentified genes in annotated genomes. It also generates user-defined group-specific datasets within the pan-genome. Interestingly, analyzing an example-set of Salmonella genomes, we detect potential footprints of adaptive convergence of horizontally transferred genes in two human-restricted pathogenic serovars – Typhi and Paratyphi A. Overall, PanCoreGen represents a state-of-the-art tool for microbial phylogenomics and pathogenomics study. PMID:26456591

From evaporating pans to transpiring plants (John Dalton Medal Lecture)

Science.gov (United States)

Roderick, Michael

2013-04-01

The name of the original inventor of irrigated agriculture is lost to antiquity. Nevertheless, one can perhaps imagine an inquisitive desert inhabitant noting the greener vegetation along a watercourse and putting two and two together. Once water was being supplied and food was being produced it would be natural to ask a further question: how much water can we put on? No doubt much experience was gained down through the ages, but again, one can readily imagine someone inverting a rain gauge, filling it with water and measuring how fast the water evaporated. The inverted rain gauge measures the demand for water by the atmosphere. We call it the evaporative demand. I do not know if this is what actually happened but it sure makes an interesting start to a talk. Evaporation pans are basically inverted rain gauges. The rain gauge and evaporation pan measure the supply and demand respectively and these instruments are the workhorses of agricultural meteorology. Rain gauges are well known. Evaporation pans are lesser known but are in widespread use and are a key part of several national standardized meteorological networks. Many more pans are used for things like scheduling irrigation on farms or estimating evaporation from lakes. Analysis of the long records now available from standardized networks has revealed an interesting phenomenon, i.e., pan evaporation has increased in some places and decreased in other but when averaged over large numbers of pans there has been a steady decline. These independent reports from, for example, the US, Russia, China, India, Thailand, are replicated in the southern hemisphere in, for example, Australia, New Zealand and South Africa. One often hears the statement that because the earth is expected to warm with increasing greenhouse gas emissions then it follows that water will evaporate faster. The pan evaporation observations show that this widely held expectation is wrong. When expectations disagree with observations, it is the

Development and characterization of polyacrylonitrile (PAN based carbon hollow fiber membrane

Directory of Open Access Journals (Sweden)

Syed Mohd Saufi

2002-11-01

Full Text Available This paper reports the development and characterization of polyacrylonitrile (PAN based carbon hollow fiber membrane. Nitrogen was used as an inert gas during pyrolysis of the PAN hollow fiber membrane into carbon membrane. PAN membranes were pyrolyzed at temperature ranging from 500oC to 800oC for 30 minutes of thermal soak time. Scanning Electron Microscope (SEM, Fourier Transform Infrared Spectroscopy (FTIR and gas sorption analysis were applied to characterize the PAN based carbon membrane. Pyrolysis temperature was found to significantly change the structure and properties of carbon membrane. FTIR results concluded that the carbon yield still could be increased by pyrolyzing PAN membranes at temperature higher than 800oC since the existence of other functional group instead of CH group. Gas adsorption analysis showed that the average pore diameter increased up to 800oC.

ATLAS World-cloud and networking in PanDA

CERN Document Server

Barreiro Megino, Fernando Harald; The ATLAS collaboration; De, Kaushik; Di Girolamo, Alessandro; Walker, Rodney

2016-01-01

The ATLAS computing model was originally designed as static clouds (usually national or geographical groupings of sites) around the Tier 1 centers, which confined tasks and most of the data traffic. Since those early days, the sites' network bandwidth has increased at O(1000) and the difference in functionalities between Tier 1s and Tier 2s has reduced. After years of manual, intermediate solutions, we have now ramped up to full usage of World-cloud, the latest step in the PanDA Workload Management System to increase resource utilization on the ATLAS Grid, for all workflows (MC production, data (re)processing, etc.). We have based the development on two new site concepts. Nuclei sites are the Tier 1s and large Tier 2s, where tasks will be assigned and the output aggregated, and satellites are the sites that will execute the jobs and send the output to their nucleus. Nuclei and satellite sites are dynamically paired by PanDA for each task based on the input data availability, capability matching, site load and...

ATLAS WORLD-cloud and networking in PanDA

CERN Document Server

AUTHOR|(SzGeCERN)643806; The ATLAS collaboration; De, Kaushik; Di Girolamo, Alessandro; Maeno, Tadashi; Walker, Rodney

2017-01-01

The ATLAS computing model was originally designed as static clouds (usually national or geographical groupings of sites) around the Tier 1 centres, which confined tasks and most of the data traffic. Since those early days, the sites' network bandwidth has increased at 0(1000) and the difference in functionalities between Tier 1s and Tier 2s has reduced. After years of manual, intermediate solutions, we have now ramped up to full usage of World-cloud, the latest step in the PanDA Workload Management System to increase resource utilization on the ATLAS Grid, for all workflows (MC production, data (re)processing, etc.). We have based the development on two new site concepts. Nuclei sites are the Tier 1s and large Tier 2s, where tasks will be assigned and the output aggregated, and satellites are the sites that will execute the jobs and send the output to their nucleus. PanDA dynamically pairs nuclei and satellite sites for each task based on the input data availability, capability matching, site load and network...

Effectiveness of KNIFC-PAN Resin in Absorbing Radiocesium in Seawater

International Nuclear Information System (INIS)

Nurrul Assyikeen Mohd Jaffary; Abdul Kadir Ishak; Zal Uyun Wan Mahmood; Wo, Y.M.; Norfaizal Mohamed; Mohd Tarmizi Ishak

2016-01-01

The effectiveness of KNiFC-PAN absorber, potassium-nickel hexacyanoferrate (II) (KNiFC) bound into modified polyacrylonitrile (PAN) have been tested for capability in absorbing radiocesium in seawater samples. The efficiency of the KNiFC-PAN were measured by the different activity of the radiocesium measured using Hyper Pure Germanium Detector (HPGe) in initial spiked seawater and eluent seawater after passed through 5 ml of KNiFC absorber. Study showed 87 % effectiveness of the KNiFC-PAN in absorbing radiocesium. Further study conducted to illustrate relation between spiked seawater and activity measured for 5 ml of KniFC passed through spiked seawater in packed column. This study suggested this relative 15L cubitainer method can be used to monitor the radiocesium in emergency situation for the fast and reliable result. (author)

El Abasto de Pan en el Madrid del Siglo XVII

Directory of Open Access Journals (Sweden)

José Ignacio ANDRÉS UCENDO

2012-12-01

Full Text Available El mercado del pan era el más importante de los mercados de abastos, pero también el que contaba con el más complejo sistema de intervención. Los objetivos de la política de abastos eran asegurar un suministro continuo a precios estables y moderados.Los instrumentos incluían la regulación de los precios del grano y el pan, la provisión directa a través del pósito municipal y, en el caso de la corte, el pan de registro. En este trabajo examinamos la política de tasas, las disposiciones del gobierno y el comportamiento de los precios del pan en Madrid y del trigo en los mercados de origen.

Preparation of Ag/HBP/PAN Nanofiber Web and Its Antimicrobial and Filtration Property

Directory of Open Access Journals (Sweden)

Li-Rong Yao

2016-01-01

Full Text Available To widen the application of nanofibers web in the field of medical health materials, a new Ag/amino-terminated hyperbranched polymer (HBP/polyacrylonitrile (PAN nanofiber web with excellent antimicrobial activity and filtration property was produced with Ag/HBP dispersion solution and PAN nanofiber. Ag/HBP dispersion solution was prepared with HBP as reducer and stabilizer, and Ag/HBP/PAN nanofiber was prepared by modifying electrospun PAN nanofiber with Ag/HBP aqueous solution. The characterization results showed that spherical Ag nanoparticles were prepared and they had a narrow distribution in HBP aqueous solution. The results of Ag/HBP/PAN nanofiber characterized with SEM and EDS showed that the content of silver nanoparticles on the surface of PAN nanofiber was on the increase when the treating temperature rose. The bacterial reduction rates of HBP-treated PAN nanofiber against S. aureus and E. coli were about 89%, while those of the Ag/HBP/PAN nanofiber against S. aureus and E. coli were 99.9% and 99.96%, respectively, due to the cooperative effects from the amino groups in HBP and Ag nanoparticles. Moreover, the small pores and high porosity in Ag/HBP/PAN nanofiber web resulted in high filtration efficiency (99.9% for removing smaller particles (0.1 μm~0.7 μm, which was much higher than that of the gauze mask.

Source analysis of peroxyacetyl nitrate (PAN) in Guangzhou, China: a yearlong observation study

Science.gov (United States)

Wang, B. G.; Zhu, D.; Zou, Y.; Wang, H.; Zhou, L.; Ouyang, X.; Shao, H. F.; Deng, X. J.

2015-06-01

In recent years, photochemical smog has been a major cause of air pollution in the metropolitan area of Guangzhou, China, with a continuing increase in the concentrations of photochemical pollutants. The concentration of peroxyacetyl nitrate (PAN) has often been found to reach very high levels, posing a potential threat to the public health. To better understand the changes in PAN concentration and its sources, a study was carried from January to December of 2012 at the Guangzhou Panyu Atmospheric Composition Station (GPACS) to measure the atmospheric concentrations of PAN as well as those of ozone (O3), nitrogen oxides (NOx), and non-methane hydrocarbon (NMHC). These data were analyzed to investigate the quantitative relationships between PAN and its precursors. In the study period, the hourly concentrations of PAN varied from below instrument detection limit to 12.0 ppbv. The yearly mean concentration of PAN was 0.84 ppbv, with the daily mean concentration exceeding 5 ppbv in 32 of the total observation days. Calculations indicate that among the measured NMHC species, alkenes accounted for 53 % of the total NMHC contribution to the PAN production, with aromatics and alkanes accounting for about 11 and 7 % of the total, respectively. During the period of our observation only a modest correlation was found between the concentrations of PAN and O3 for daytime hours, and observed PAN concentrations were relatively high even though the observed NMHCs/NOx ratio was low. This suggests regional air mass transport of pollutants had a major impact on the PAN concentrations in Guangzhou area.

El pan nuestro de cada mes

Directory of Open Access Journals (Sweden)

Dora Cecilia Ramírez

1989-01-01

Full Text Available Comenzar escribiendo que Pan fue una revista singular sería caer en un lugar común. Lo más fácil sería decir que Pan fue o es una caja de sorpresas. Corre 1935. Colombia es un país rural; cobija una sociedad que se resiste, a pesar de los discursos progresistas, a ese proceso de transformación que ya anuncia el comercio cafetero y las primeras huelgas. Es la época de auge de los ferrocarriles nacionales, cuando se toma Cafiaspirina y Griperol, se viaja a Nueva York vía La Habana en lujosos trasatlánticos y, por supuesto, no existe la televisión. La mujer está en la casa en "lo suyo" el hombre por fuera también en "lo suyo", "las ventanas de acero se imponen en las construcciones modernas" y la soledad del ser es la misma de hoy. Se respira una gran mediocridad nacional y los escritores adoran la retórica. Entonces aparece Pan, con su formato de 15 por 23 centímetros y sus ochenta y cuatro páginas.

Kinematic measurement from panned cinematography.

Science.gov (United States)

Gervais, P; Bedingfield, E W; Wronko, C; Kollias, I; Marchiori, G; Kuntz, J; Way, N; Kuiper, D

1989-06-01

Traditional 2-D cinematography has used a stationary camera with its optical axis perpendicular to the plane of motion. This method has constrained the size of the object plane or has introduced potential errors from a small subject image size with large object field widths. The purpose of this study was to assess a panning technique that could overcome the inherent limitations of small object field widths, small object image sizes and limited movement samples. The proposed technique used a series of reference targets in the object field that provided the necessary scales and origin translations. A 102 m object field was panned. Comparisons between criterion distances and film measured distances for field widths of 46 m and 22 m resulted in absolute mean differences that were comparable to that of the traditional method.

RPAN: rice pan-genome browser for ∼3000 rice genomes.

Science.gov (United States)

Sun, Chen; Hu, Zhiqiang; Zheng, Tianqing; Lu, Kuangchen; Zhao, Yue; Wang, Wensheng; Shi, Jianxin; Wang, Chunchao; Lu, Jinyuan; Zhang, Dabing; Li, Zhikang; Wei, Chaochun

2017-01-25

A pan-genome is the union of the gene sets of all the individuals of a clade or a species and it provides a new dimension of genome complexity with the presence/absence variations (PAVs) of genes among these genomes. With the progress of sequencing technologies, pan-genome study is becoming affordable for eukaryotes with large-sized genomes. The Asian cultivated rice, Oryza sativa L., is one of the major food sources for the world and a model organism in plant biology. Recently, the 3000 Rice Genome Project (3K RGP) sequenced more than 3000 rice genomes with a mean sequencing depth of 14.3×, which provided a tremendous resource for rice research. In this paper, we present a genome browser, Rice Pan-genome Browser (RPAN), as a tool to search and visualize the rice pan-genome derived from 3K RGP. RPAN contains a database of the basic information of 3010 rice accessions, including genomic sequences, gene annotations, PAV information and gene expression data of the rice pan-genome. At least 12 000 novel genes absent in the reference genome were included. RPAN also provides multiple search and visualization functions. RPAN can be a rich resource for rice biology and rice breeding. It is available at http://cgm.sjtu.edu.cn/3kricedb/ or http://www.rmbreeding.cn/pan3k. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

Disordered eating and food restrictions in children with PANDAS/PANS.

Science.gov (United States)

Toufexis, Megan D; Hommer, Rebecca; Gerardi, Diana M; Grant, Paul; Rothschild, Leah; D'Souza, Precilla; Williams, Kyle; Leckman, James; Swedo, Susan E; Murphy, Tanya K

2015-02-01

Sudden onset clinically significant eating restrictions are a defining feature of the clinical presentation of some of the cases of pediatric acute-onset neuropsychiatric syndrome (PANS). Restrictions in food intake are typically fueled by contamination fears; fears of choking, vomiting, or swallowing; and/or sensory issues, such as texture, taste, or olfactory concerns. However, body image distortions may also be present. We investigate the clinical presentation of PANS disordered eating and compare it with that of other eating disorders. We describe 29 patients who met diagnostic criteria for PANS. Most also exhibited evidence that the symptoms might be sequelae of infections with Group A streptococcal bacteria (the pediatric autoimmune neuropsychiatric disorder associated with streptococcal infections [PANDAS] subgroup of PANS). The clinical presentations are remarkable for a male predominance (2:1 M:F), young age of the affected children (mean=9 years; range 5-12 years), acuity of symptom onset, and comorbid neuropsychiatric symptoms. The food refusal associated with PANS is compared with symptoms listed for the new Diagnostic and Statistical Manual of Mental Disorders, 5th ed. (DSM-V) diagnosis of avoidant/restrictive food intake disorder (ARFID). Treatment implications are discussed, as well as directions for further research.

Present and past microbial life in continental salt pan sediments in Southern Africa

Science.gov (United States)

Genderjahn, Steffi; Mangelsdorf, Kai; Alawi, Mashal; Kallmeyer, Jens; Wagner, Dirk

2015-04-01

The southwestern African region is characterized by strong climate variability. To get a better understanding on the climate evolution and environmental condition in Namibia and South Africa, terrestrial climate archives are investigated. Since there are almost no lakes, continental salt pans represent the only terrestrial geoarchives with the potential to preserve climate signals during sediment deposition. Climate has a strong impact on the salt pan ecosystem, causing adaptation of salt pan microorganisms to varying temperature, precipitation and salinity conditions. To reconstruct climate variability during the Holocene, the composition, diversity and abundance of indigenous microbial communities with depth and related to different soil parameters are investigated. We are using a combined approach of microbiological and lipid biomarker analyses to demonstrate the response of the microbial communities due to environmental changes. For microbiological analyses outcrops were conducted or short cores (0-100 cm) were drilled at four different salt pans in Aminuis, Koes and Witpan region having rather different geochemical properties. The current work focused on changes within the microbial communities due to the impact of long-term climate variation and the associated environmental changes and is part of the project 'Signals of climate and landscape change preserved in southern African GeoArchives' in the scope of the SPACES program, which is funded by the German Federal Ministry of Education and Research (BMBF). For a quantitative characterization of microbial communities molecular techniques such as polymerase chain reaction (PCR) and real-time quantitative PCR (qPCR) based on the 16S rRNA genes are used. Moreover, 454 sequencing technique is utilized to describe the diversity and abundance of microorganisms in detail. Soil parameters are described by standard soil scientific methods. Furthermore, microbial lipid biomarker analyses were done to characterize living

[Shifting path of industrial pollution gravity centers and its driving mechanism in Pan-Yangtze River Delta].

Science.gov (United States)

Zhao, Hai-Xia; Jiang, Xiao-Wei; Cui, Jian-Xin

2014-11-01

Shifting path of industrial pollution gravity centers is the response of environmental special formation during the industry transfer process, in order to prove the responding of industrial pollution gravity centers to industry transfer in economically developed areas, this paper calculates the gravity centers of industrial wastewater, gas and solid patterns and reveals the shifting path and its driving mechanism, using the data of industrial pollution in the Pan-Yangtze River Delta from 2000 to 2010. The results show that the gravity center of the industrial waste in Pan-Yangtze River Delta shifts for sure in the last 10 years, and gravity center of solid waste shifts the maximum distance within the three wastes, which was 180.18 km, and shifting distances for waste gas and waste water were 109.51 km and 85.92 km respectively. Moreover, the gravity center of the industrial waste in Pan-Yangtze River Delta shifts westwards, and gravity centers of waste water, gas and solid shift for 0.40 degrees, 0.17 degrees and 0.03 degrees respectively. The shifting of industrial pollution gravity centers is driven by many factors. The rapid development of the heavy industry in Anhui and Jiangxi provinces results in the westward shifting of the pollutions. The optimization and adjustment of industrial structures in Yangtze River Delta region benefit to alleviating industrial pollution, and high-polluting industries shifted to Anhui and Jiangxi provinces promotes pollution gravity center shifting to west. While the development of massive clean enterprise, strong environmental management efforts and better environmental monitoring system slow the shifting trend of industrial pollution to the east in Yangtze River Delta. The study of industrial pollution gravity shift and its driving mechanism provides a new angle of view to analyze the relationship between economic development and environmental pollution, and also provides academic basis for synthetical management and control of

Developing a Competency-Based Pan-European Accreditation Framework for Health Promotion

Science.gov (United States)

Battel-Kirk, Barbara; Van der Zanden, Gerard; Schipperen, Marielle; Contu, Paolo; Gallardo, Carmen; Martinez, Ana; Garcia de Sola, Silvia; Sotgiu, Alessandra; Zaagsma, Miriam; Barry, Margaret M.

2012-01-01

Background: The CompHP Pan-European Accreditation Framework for Health Promotion was developed as part of the CompHP Project that aimed to develop competency-based standards and an accreditation system for health promotion practice, education, and training in Europe. Method: A phased, multiple-method approach was employed to facilitate consensus…

Pan Drug-Resistant Environmental Isolate of Acinetobacter baumannii from Croatia.

Science.gov (United States)

Goic-Barisic, Ivana; Seruga Music, Martina; Kovacic, Ana; Tonkic, Marija; Hrenovic, Jasna

2017-06-01

Acinetobacter baumannii is an emerging nosocomial pathogen with also emerging resistance to different antibiotics. Multidrug and pan drug-resistant clinical isolates were reported worldwide. Here we report the first evidence of pan drug-resistant environmental isolate of A. baumannii. The isolate was recovered from the effluent of secondary treated municipal wastewater of the City of Zagreb, Croatia. The isolate was resistant to penicillins/β-lactamase inhibitors, carbapenems, fluoroquinolones, aminoglycosides, folate pathway inhibitors, and polymyxins, except intermediately susceptible to minocycline and tigecycline. Intrinsic chromosomally located bla OXA-51-like gene and acquired plasmid-located bla OXA-23-like gene were related to clinical isolates. Pan drug-resistant A. baumannii can occur in natural environments outside of the hospital. Secondary treated municipal wastewater represents a potential epidemiological reservoir of pan drug-resistant A. baumannii and carbapenem resistance gene.

The development and evolution of Etosha Pan, Namibia

OpenAIRE

Hipondoka, Martin H.T.

2005-01-01

This study explores and examines the geomorphology of a large endorheic basin, approximately twice the size of Luxemburg, situated in the Etosha National Park, Namibia. The main focus is directed on how and when this depression, known as Etosha Pan, came into being. Geomorphological investigation was complemented and guided primarily by the application and interpretation of satellite-derived information. Etosha Pan has attracted scientific investigations for nearly a century. Unfortunately, t...

Fabrication of an aluminum, Caribbean-style, musical pan: Metallurgical and acoustical characterization

International Nuclear Information System (INIS)

Murr, L.E.; Esquivel, E.V.; Lawrie, S.C.; Lopez, M.I.; Lair, S.L.; Soto, K.F.; Gaytan, S.M.; Bujanda, D.; Kerns, R.G.; Guerrero, P.A.; Flores, J.A.

2006-01-01

We report herein the first development and fabrication of a 6061 aluminum alloy pan and compare its tuning and acoustic spectra for selected notes with a standard low-carbon steel Caribbean pan fabricated from a 210-L barrel. The experimental aluminum alloy pan was completely manufactured by welding a 1.68-mm-thick head sheet to a 9-mm 2 aluminum alloy hoop, sinking the head by pneumatic hammering and welding a 1.15-mm-thick aluminum alloy side or skirt to the hoop. This experimental pan was 0.66 m in diameter, in contrast to the 210-L steel barrel standard, which had a diameter of 0.57 m. Chromatic tones were observed for most rim notes on the aluminum alloy pan, but the highest octave range notes at the pan bottom were not tuned. Microstructural characterization by light optical metallography and transmission electron microscopy illustrated the necessity for high dislocation densities and associated hardness in order to stabilize the notes and to assure their chromatic tuning

Mutagenicity of pan residues and gravy from fried meat.

Science.gov (United States)

Overvik, E; Nilsson, L; Fredholm, L; Levin, O; Nord, C E; Gustafsson, J A

1987-02-01

Lean pork meat was fried with or without the addition of frying-fat at 200 or 250 degrees C. The pan residues were collected by washing the hot pan with boiling water. When producing thickened gravy the water was substituted by a mixture of water and flour, milk and flour or cream and flour. The basic extracts were tested for mutagenicity in Ames' Salmonella test on strain TA98 with the addition of S9 mix. High amounts of mutagenicity were found in all samples. The amounts of mutagenicity in the pan residues were at a comparable level of the amounts found in the meat crusts. Thickening of the gravy caused only small changes in the mutagenicity.

Microbial comparative pan-genomics using binomial mixture models

DEFF Research Database (Denmark)

Ussery, David; Snipen, L; Almøy, T

2009-01-01

The size of the core- and pan-genome of bacterial species is a topic of increasing interest due to the growing number of sequenced prokaryote genomes, many from the same species. Attempts to estimate these quantities have been made, using regression methods or mixture models. We extend the latter...... approach by using statistical ideas developed for capture-recapture problems in ecology and epidemiology. RESULTS: We estimate core- and pan-genome sizes for 16 different bacterial species. The results reveal a complex dependency structure for most species, manifested as heterogeneous detection...... probabilities. Estimated pan-genome sizes range from small (around 2600 gene families) in Buchnera aphidicola to large (around 43000 gene families) in Escherichia coli. Results for Echerichia coli show that as more data become available, a larger diversity is estimated, indicating an extensive pool of rarely...

Emergence, concept, and understanding of Pan-River-Basin (PRB

Directory of Open Access Journals (Sweden)

Ning Liu

2015-12-01

Full Text Available In this study, the concept of Pan-River-Basin (PRB for water resource management is proposed with a discussion on the emergence, concept, and application of PRB. The formation and application of PRB is also discussed, including perspectives on the river contribution rates, harmonious levels of watershed systems, and water resource availability in PRB system. Understanding PRB is helpful for reconsidering river development and categorizing river studies by the influences from human projects. The sustainable development of water resources and the harmonization between humans and rivers also requires PRB.

Metallurgical and acoustical characterization of a hydroformed, 304 stainless steel, Caribbean-style musical pan

International Nuclear Information System (INIS)

Murr, L.E.; Gaytan, S.M.; Lopez, M.I.; Bujanda, D.E.; Martinez, E.Y.; Whitmyre, G.; Price, H.

2008-01-01

We report herein the metallurgical and acoustical characterization of hydroformed 304 stainless steel, Caribbean pans. These pans were fully tuned to chromatic tones and compared to a manufactured, low-carbon, Caribbean steel pan standard. Hydroformed platforms had a Vickers microindentation hardness of HV 345, which was reduced by annealing during pan fabrication to HV 270. Skirts welded to the hydroformed head had a microindentation hardness of HV 440. Microstructural characterization by light optical metallography and transmission electron microscopy illustrated microstructures (including grain structures) characteristic of these pan microindentation hardnesses

Publishing datasets with eSciDoc and panMetaDocs

Science.gov (United States)

Ulbricht, D.; Klump, J.; Bertelmann, R.

2012-04-01

Currently serveral research institutions worldwide undertake considerable efforts to have their scientific datasets published and to syndicate them to data portals as extensively described objects identified by a persistent identifier. This is done to foster the reuse of data, to make scientific work more transparent, and to create a citable entity that can be referenced unambigously in written publications. GFZ Potsdam established a publishing workflow for file based research datasets. Key software components are an eSciDoc infrastructure [1] and multiple instances of the data curation tool panMetaDocs [2]. The eSciDoc repository holds data objects and their associated metadata in container objects, called eSciDoc items. A key metadata element in this context is the publication status of the referenced data set. PanMetaDocs, which is based on PanMetaWorks [3], is a PHP based web application that allows to describe data with any XML-based metadata schema. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. Access rights can be applied to set visibility of datasets to other project members and allow collaboration on and notifying about datasets (RSS) and interaction with the internal messaging system, that was inherited from panMetaWorks. When a dataset is to be published, panMetaDocs allows to change the publication status of the eSciDoc item from status "private" to "submitted" and prepare the dataset for verification by an external reviewer. After quality checks, the item publication status can be changed to "published". This makes the data and metadata available through the internet worldwide. PanMetaDocs is developed as an eSciDoc application. It is an easy to use graphical user interface to eSciDoc items, their data and metadata. It is also an application supporting a DOI publication agent during the process of

The Salmonella enterica Pan-genome

DEFF Research Database (Denmark)

Jacobsen, Annika; Hendriksen, Rene S.; Aarestrup, Frank Møller

2011-01-01

Salmonella enterica is divided into four subspecies containing a large number of different serovars, several of which are important zoonotic pathogens and some show a high degree of host specificity or host preference. We compare 45 sequenced S. enterica genomes that are publicly available (22......, and the core and pan-genome of Salmonella were estimated to be around 2,800 and 10,000 gene families, respectively. The constructed pan-genomic dendrograms suggest that gene content is often, but not uniformly correlated to serotype. Any given Salmonella strain has a large stable core, whilst...... there is an abundance of accessory genes, including the Salmonella pathogenicity islands (SPIs), transposable elements, phages, and plasmid DNA. We visualize conservation in the genomes in relation to chromosomal location and DNA structural features and find that variation in gene content is localized in a selection...

Real-Time FPGA-Based Object Tracker with Automatic Pan-Tilt Features for Smart Video Surveillance Systems

Directory of Open Access Journals (Sweden)

Sanjay Singh

2017-05-01

Full Text Available The design of smart video surveillance systems is an active research field among the computer vision community because of their ability to perform automatic scene analysis by selecting and tracking the objects of interest. In this paper, we present the design and implementation of an FPGA-based standalone working prototype system for real-time tracking of an object of interest in live video streams for such systems. In addition to real-time tracking of the object of interest, the implemented system is also capable of providing purposive automatic camera movement (pan-tilt in the direction determined by movement of the tracked object. The complete system, including camera interface, DDR2 external memory interface controller, designed object tracking VLSI architecture, camera movement controller and display interface, has been implemented on the Xilinx ML510 (Virtex-5 FX130T FPGA Board. Our proposed, designed and implemented system robustly tracks the target object present in the scene in real time for standard PAL (720 × 576 resolution color video and automatically controls camera movement in the direction determined by the movement of the tracked object.

An integrated pan-European ancillary services market for frequency control

International Nuclear Information System (INIS)

Scherer, Marc; Zima, Marek; Andersson, Göran

2013-01-01

Real-time balancing of mismatches between consumption and production is one of the key elements for the secure operation of power systems. This takes place within the framework of ancillary services managed by respective national transmission system operating companies. The objective of this paper is to investigate the option of one integrated pan-European ancillary services market. Our contribution is twofold: quantifying the potential benefit of such an option and outlining a possible approach to such an option highlighting its positive properties as well as risks and challenges. In several recently published considerations of pan-European electricity supply models this topic has not been adequately addressed, but we believe it is one of the crucial subjects in shaping the future electricity supply in Europe. -- Author-Highlights: •We investigated the option of a one-area market for frequency control in Continental Europe. •For the current situation a centralised approach may lead to a significant reduction of control reserves. •In the long run it is a possibility to avoid a tremendous increase of needed control reserves. •The implementation of an integrated market is not to be underestimated

File list: Unc.Pan.10.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.Pan.10.AllAg.Pancreas mm9 Unclassified Pancreas Pancreas SRX1125784,SRX1125785,...1125798 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.Pan.10.AllAg.Pancreas.bed ...

File list: Unc.Pan.20.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.Pan.20.AllAg.Pancreas mm9 Unclassified Pancreas Pancreas SRX1125784,SRX1125785,...1125798 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.Pan.20.AllAg.Pancreas.bed ...

File list: Unc.Pan.50.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.Pan.50.AllAg.Pancreas mm9 Unclassified Pancreas Pancreas SRX1125784,SRX1125785,...1125791 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.Pan.50.AllAg.Pancreas.bed ...

Estrategias mundiales en la reducción de sal/sodio en el pan

OpenAIRE

Mónica Valverde Guillén; Jennifer Picado Pérez

2013-01-01

Objetivo: Proporcionar información sobre las acciones mundiales en la reducción de sal/sodio en el pan para generar datos útiles en la implementación de estrategias que busquen la disminución del consumo de sal/sodio a partir de productos panificados. Método: Se realizó una búsqueda de información en las bases de datos de Binass, PubMed, Scielo e instituciones gubernamentales. Las palabras claves fueron: contenido de sodio en el pan, menos sodio en pan, acciones para reducir sal en el pan, co...

BRDF of Salt Pan Regolith Samples

Science.gov (United States)

Georgiev, Georgi T.; Gatebe, Charles K.; Butler, James J.; King, Michael D.

2008-01-01

Laboratory Bi-directional Reflectance Distribution Function (BRDF) measurements of salt pan regolith samples are presented in this study in an effort to understand the role of spatial and spectral variability of the natural biome. The samples were obtained from Etosha Pan, Namibia (19.20 deg S, 15.93 deg E, alt. 1100 m). It is shown how the BRDF depends on the measurement geometry - incident and scatter angles and on the sample particle sizes. As a demonstration of the application of the results, airborne BRDF measurements acquires with NASA's Cloud Absorption Radiometer (CAR) over the same general site where the regolith samples were collected are compared with the laboratory results. Good agreement between laboratory measured and field measured BRDF is reported.

Proceedings of the 5. Pan Pacific conference on nondestructive testing

International Nuclear Information System (INIS)

Kittmer, C.A.

1987-03-01

This is the fifth in the series of Pan Pacific Conference on Nondestructive Testing held once every two years. The honour of hosting the conference is shared among those countries bordering on the Pacific Ocean, this year the responsibility being granted to Canada. The call for papers for this three day conference attracted significant interest. This provided the Technical Program Committee with an extremely difficult task in reducing the overwhelming response to only 46 (plus 10 alternates) for presentation at the conference, and inclusion in these proceedings. The selected papers provide an international perspective on advances in nondestructive techniques such as ultrasonics, eddy current, radiography, magnetic particle and liquid penetrant, as well as their diverse applications in the various countries involved

Pan masala advertisements are surrogate for tobacco products

OpenAIRE

Sushma C; Sharang C

2005-01-01

BACKGROUND: Pan masala is a comparatively recent habit in India and is marketed with and without tobacco. Advertisements of tobacco products have been banned in India since 1st May 2004. The advertisements of plain pan masala, which continue in Indian media, have been suspected to be surrogate for tobacco products bearing the same name. The study was carried out to assess whether these advertisements were for the intended product, or for tobacco products with same brand name. MATERIALS AND ...

File list: Unc.Pan.05.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.Pan.05.AllAg.Pancreas mm9 Unclassified Pancreas Pancreas SRX527836,SRX1125784,S...X527839 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.Pan.05.AllAg.Pancreas.bed ...

Comparative Pan-Genome Analysis of Piscirickettsia salmonis Reveals Genomic Divergences within Genogroups

Directory of Open Access Journals (Sweden)

Guillermo Nourdin-Galindo

2017-10-01

Full Text Available Piscirickettsia salmonis is the etiological agent of salmonid rickettsial septicemia, a disease that seriously affects the salmonid industry. Despite efforts to genomically characterize P. salmonis, functional information on the life cycle, pathogenesis mechanisms, diagnosis, treatment, and control of this fish pathogen remain lacking. To address this knowledge gap, the present study conducted an in silico pan-genome analysis of 19 P. salmonis strains from distinct geographic locations and genogroups. Results revealed an expected open pan-genome of 3,463 genes and a core-genome of 1,732 genes. Two marked genogroups were identified, as confirmed by phylogenetic and phylogenomic relationships to the LF-89 and EM-90 reference strains, as well as by assessments of genomic structures. Different structural configurations were found for the six identified copies of the ribosomal operon in the P. salmonis genome, indicating translocation throughout the genetic material. Chromosomal divergences in genomic localization and quantity of genetic cassettes were also found for the Dot/Icm type IVB secretion system. To determine divergences between core-genomes, additional pan-genome descriptions were compiled for the so-termed LF and EM genogroups. Open pan-genomes composed of 2,924 and 2,778 genes and core-genomes composed of 2,170 and 2,228 genes were respectively found for the LF and EM genogroups. The core-genomes were functionally annotated using the Gene Ontology, KEGG, and Virulence Factor databases, revealing the presence of several shared groups of genes related to basic function of intracellular survival and bacterial pathogenesis. Additionally, the specific pan-genomes for the LF and EM genogroups were defined, resulting in the identification of 148 and 273 exclusive proteins, respectively. Notably, specific virulence factors linked to adherence, colonization, invasion factors, and endotoxins were established. The obtained data suggest that these

PNL1 and PNL2 : Arabidopsis homologs of maize PAN1

OpenAIRE

Clark, Lauren Gail

2010-01-01

PNL1 and PNL2 are the closest Arabidopsis relatives of maize pan1. pan1 and the PNL family of 11 genes encode leucine-rich repeat, receptor-like kinases, however none of these putative kinases is predicted to have actual kinase function, due to one or more amino acid substitutions in residues necessary for kinase function. Because PAN1 plays a role in subsidiary cell formation in maize, it is hypothesized that PNL1 and PNL2 are involved in stomatal formation in Arabidopsis. YFP fusions of the...

Food protection activities of the Pan American Health Organization.

Science.gov (United States)

1994-03-01

One of the most widespread health problems in the Caribbean and Latin America is contaminated food and foodborne illness. The Pan American Health Organization (PAHO) has been a major force in activities to strengthen food protection. The program within the regional Program of Technical Cooperation is administered by the Veterinary Public Health program and under the guidance of the Pan American Institute for Food protection and Zoonoses in Buenos Aires, Argentina. A food action plan for 1986-90 was established at the 1986 Pan American Sanitary Conference, and extended to cover 1991-95. Program activities during the 1990s covered cholera, epidemiologic surveillance, street food vendors, shellfish poisoning, meat, national programs, information systems, air catering, food irradiation, and tourism. The action plan for 1991-95 promoted greater political support and cooperation within and between related sectors and institutions, management, and education. The aims were to organize national integrated programs, to strengthen laboratory services, to strengthen inspection services, to establish epidemiologic surveillance systems, and to promote food protection through community participation. Program activities included the initiatives of the Veterinary Public Health Program in 1991 to distribute literature on the transmission of cholera by foods. Studies were conducted in Bolivia, Colombia, and Peru on food contamination. Microbiologists received training on standard methods for detecting Vibrio cholerae in foods. A working group of experts from 10 countries examined the issues and produced a guide for investigating the incidence of foodborne disease. PAHO has contributed to the formation of an Inter-American Network for Epidemiologic Surveillance of Foodborne Diseases. PAHO has worked to improve hygienic practices among street food vendors. Seminars on paralytic shellfish poisoning were conducted in 1990; the outcome was a network working to strengthen national

Design of an Enterobacteriaceae Pan-genome Microarray Chip

DEFF Research Database (Denmark)

Lukjancenko, Oksana; Ussery, David

2010-01-01

-density microarray chip has been designed, using 116 Enterobacteriaceae genome sequences, taking into account the enteric pan-genome. Probes for the microarray were checked in silico and performance of the chip, based on experimental strains from four different genera, demonstrate a relatively high ability...... to distinguish those strains on genus, species, and pathotype/serovar levels. Additionally, the microarray performed well when investigating which genes were found in a given strain of interest. The Enterobacteriaceae pan-genome microarray, based on 116 genomes, provides a valuable tool for determination...

File list: ALL.Pan.50.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.50.AllAg.Pancreas mm9 All antigens Pancreas Pancreas SRX111395,ERX651337,SR...ERX383750,SRX672452 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.50.AllAg.Pancreas.bed ...

File list: ALL.Pan.10.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.10.AllAg.Pancreas mm9 All antigens Pancreas Pancreas SRX111395,ERX651337,SR...ERX383754,ERX383752 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.10.AllAg.Pancreas.bed ...

File list: ALL.Pan.05.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.05.AllAg.Pancreas mm9 All antigens Pancreas Pancreas ERX651337,SRX527836,SR...ERX383754,ERX383752 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.05.AllAg.Pancreas.bed ...

File list: ALL.Pan.20.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.20.AllAg.Pancreas mm9 All antigens Pancreas Pancreas SRX111395,ERX651337,SR...ERX383750,SRX672452 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.20.AllAg.Pancreas.bed ...

Measurements of postnatal growth of the skull of Pan troglodytes verus using lateral cephalograms.

Science.gov (United States)

Arnold, Wolfgang H; Protsch von Zieten, Reiner; Schmidt, Ekehard

2003-03-01

The postnatal growth of the viscerocranium in relation to the neurocranium of Pan troglodytes verus has been investigated using standardized lateral cephalograms. Sex and age were determined on the basis of cranial morphology and the skulls were divided into four age groups: infantile, juvenile, subadult and adult. The cephalograms were traced on transparencies and specific anatomical landmarks were identified for the measurement of lines angles and the area of the neurocranium and viscerocranium. The results showed that the skull of Pan troglodytes verus exhibits klinorhynchy. During postnatal growth it develops towards airorhynchy, but never shows true airorhynchy. In the infantile age group the measured area of the neurocranium is larger than that of the viscerocranium. The measured area of the viscerocranium increases until adulthood and is larger than that of the neurocranium in the subadult and adult group. From the results we conclude that in Pan troglodytes verus growth of the neurocranium seizes early in juvenile individuals, whereas the viscerocranium grows until adulthood. This may reflect an adaptation to the masticatory system.

A Portable Burn Pan for the Disposal of Gun Propellants

Science.gov (United States)

2016-11-01

industrial suppliers. There should be no problems for most installations to fabricate or contract out the fabrication of a burn pan. ERDC/CRREL MP...2012). Measuring ener- getic contaminant deposition rates on snow. Water Air Soil Pollut (2012) 223:3689–3699. [25] Rasemann, W (2000) Industrial ...elevates the system off the ground, providing both clearance from most combustible materials or snow that may lie beneath it while partially

A Portable Burn Pan for the Disposal of Excess Propellants

Science.gov (United States)

2016-11-01

Measuring ener- getic contaminant deposition rates on snow. Water Air Soil Pollut (2012) 223:3689–3699. [25] Rasemann, W (2000) Industrial waste...the system off the ground, providing both clearance from most combustible materials or snow that may lie beneath it while partially containing the...ergetic compounds in the propellant charges. This mass was measured outside the pan, as the most important component of the residues is what is

File list: ALL.Pan.05.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.05.AllAg.Pancreas hg19 All antigens Pancreas Pancreas SRX347280,SRX134735,S...71,SRX342269,SRX188948,SRX188958 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.Pan.05.AllAg.Pancreas.bed ...

File list: ALL.Pan.20.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.20.AllAg.Pancreas hg19 All antigens Pancreas Pancreas SRX136972,ERX103432,S...58,SRX188948,SRX270968,SRX347271 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.Pan.20.AllAg.Pancreas.bed ...

File list: ALL.Pan.10.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.10.AllAg.Pancreas hg19 All antigens Pancreas Pancreas SRX136972,SRX136967,S...71,SRX342269,SRX188948,SRX188958 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.Pan.10.AllAg.Pancreas.bed ...

75 FR 8919 - Federal Consistency Appeal by Pan American Grain Co.

Science.gov (United States)

2010-02-26

... by Pan American Grain Co. AGENCY: National Oceanic and Atmospheric Administration (NOAA), Department... Grain Co., has filed an administrative appeal with the Department of Commerce (Department), requesting..., 2010, Pan American Grain Co. filed notice of an appeal with the Secretary of Commerce (Secretary...

PanDA: Exascale Federation of Resources for the ATLAS Experiment at the LHC

CERN Document Server

AUTHOR|(SzGeCERN)643806; The ATLAS collaboration; Caballero-Bejar, Jose; De, Kaushik; Hover, John; Klimentov, Alexei; Maeno, Tadashi; Nilsson, Paul; Oleynik, Danila; Padolski, Siarhei; Panitkin, Sergey; Petrosyan, Artem; Wenaus, Torre

2016-01-01

After a scheduled maintenance and upgrade period, the world’s largest and most powerful machine - the Large Hadron Collider(LHC) - is about to enter its second run at unprecedented energies. In order to exploit the scientific potential of the machine, the experiments at the LHC face computational challenges with enormous data volumes that need to be analysed by thousand of physics users and compared to simulated data. Given diverse funding constraints, the computational resources for the LHC have been deployed in a worldwide mesh of data centres, connected to each other through Grid technologies. The PanDA (Production and Distributed Analysis) system was developed in 2005 for the ATLAS experiment on top of this heterogeneous infrastructure to seamlessly integrate the computational resources and give the users the feeling of a unique system. Since its origins, PanDA has evolved together with upcoming computing paradigms in and outside HEP, such as changes in the networking model, Cloud Computing and HPC. It ...

Utilization of Prickly Pear Peels to Improve Quality of Pan Bread

International Nuclear Information System (INIS)

Anwar, M.M.; Sallam, E.M.

2016-01-01

This investigation aimed to study utilization of prickly pear peels to improve quality of pan bread. Prickly pear peels powder added to wheat flour 72 % at levels 1.0 and 2.0% to make pan beard. In this study, evaluation of nutrients and chemical constitutes and functional properties of prickly pear peels as well as the rheological properties of dough contained prickly pear peels at levels 1% and 2% has been conducted. Then evaluated organoleptic characteristics of pan bread made of it also determined staling rate. Results showed that prickly pear peels had higher content of 32.67 % fiber, 14.25 % pectin and 87.82 % ascorbic acid, and higher contents of antioxidant components. It consists of 441.11 mg/100 g, total phenols, 35.2 flavonoids mg/100 g and DPPH radical-scavenging 62.14%, also water holding capacity was 1.8 ml H 2 O / g , oil holding capacity 2.35 (ml oil/g) and foam stability 7.15%. The major phenolic compounds Oleuro 1264.407, pyrogallo 1149.68, Benzoic 982.37, 3-oH Tyrosol 588.53, Ellagic 413.26, Chorogenic 271.10, Protocatechuic acid 176.02, P-oH- Benzoic 112.78, Epicatechin105.99, Gallic acid 61.26 ppm. The results revealed that addition of prickly pear peels to wheat flour increased the nutrition values of pan bread made of it due to high contents of fiber, ascorbic acid and natural antioxidants, and also decreased staling which improves the quality of pan bread, as well as increases shelf-life of pan bread.

File list: Oth.Pan.05.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.05.AllAg.Pancreas mm9 TFs and others Pancreas Pancreas SRX111395,SRX672451,...ERX383750,ERX383751,ERX383754,ERX383752 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.05.AllAg.Pancreas.bed ...

File list: Oth.Pan.10.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.10.AllAg.Pancreas mm9 TFs and others Pancreas Pancreas SRX111395,SRX672451,...ERX383750,ERX383751,ERX383754,ERX383752 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.10.AllAg.Pancreas.bed ...

File list: Oth.Pan.20.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.20.AllAg.Pancreas mm9 TFs and others Pancreas Pancreas SRX111395,SRX672451,...ERX383752,ERX383751,ERX383754,ERX383750 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.20.AllAg.Pancreas.bed ...

File list: Oth.Pan.50.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.50.AllAg.Pancreas mm9 TFs and others Pancreas Pancreas SRX111395,SRX672451,...ERX383752,ERX383751,ERX383754,ERX383750 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.50.AllAg.Pancreas.bed ...

A NEW DISTANT MILKY WAY GLOBULAR CLUSTER IN THE PAN-STARRS1 3π SURVEY

International Nuclear Information System (INIS)

Laevens, Benjamin P. M.; Martin, Nicolas F.; Sesar, Branimir; Rix, Hans-Walter; Schlafly, Edward F.; Bernard, Edouard J.; Ferguson, Annette M. N.; Slater, Colin T.; Bell, Eric F.; Burgett, William S.; Chambers, Kenneth C.; Denneau, Larry; Kaiser, Nicholas; Kudritzki, Rolf-Peter; Magnier, Eugene A.; Morgan, Jeffrey S.; Sweeney, William E.; Draper, Peter W.; Metcalfe, Nigel; Price, Paul A.

2014-01-01

We present a new satellite in the outer halo of the Galaxy, the first Milky Way satellite found in the stacked photometric catalog of the Panoramic Survey Telescope and Rapid Response System 1 (Pan-STARRS1) Survey. From follow-up photometry obtained with WFI on the MPG/ESO 2.2 m telescope, we argue that the object, located at a heliocentric distance of 145 ± 17 kpc, is the most distant Milky Way globular cluster yet known. With a total magnitude of M V = –4.3 ± 0.2 and a half-light radius of 20 ± 2 pc, it shares the properties of extended globular clusters found in the outer halo of our Galaxy and the Andromeda galaxy. The discovery of this distant cluster shows that the full spatial extent of the Milky Way globular cluster system has not yet been fully explored

Capturing pan-Canadian Primary Health Care indicator data using multiple approaches for data collection.

Science.gov (United States)

Walker, Vicky; Sullivan-Taylor, Patricia; Webster, Greg; Macphail, Judith

2009-01-01

The Canadian Institute for Health Information (CIHI), in collaboration with diverse stakeholders, led the development of pan-Canadian indicators to measure primary health care. In 2006, CIHI released a set of 105 pan-Canadian Primary Health Care (PHC) indicators that were developed with the assistance of national, provincial and territorial representatives, clinicians and researchers. Additionally, data gaps were identified in a series of reports. In 2006 and 2007, CIHI assessed options for closing the data gaps so that the indicators could be measured and reported. CIHI then began a program to build the data infrastructure needed for the PHC indicators. The program included the development of content standards for electronic medical records, a prototype of a voluntary reporting system, enhancements to surveys, and the development of reports. In 2006, fewer than 10% of the 105 indicators could be calculated with existing data sources. Now, four projects have begun and over 50% of the indicators are being captured. Important relationships have been established with key collaborators. These relationships will lead to the development of a reporting system prototype and to the refinement of PHC indicators and electronic medical record (EMR) content standards. The project for pan-Canadian PHC indicators has encouraged consultation and synergy. It has motivated CIHI to establish an information program to fill data gaps and to make PHC indicators available.

Evaluation of chemopreventive effects of betel leaf on the genotoxicity of pan masala.

Science.gov (United States)

Trivedi, A H; Patel, R K; Rawal, U M; Adhvaryu, S G; Balar, D B

1994-01-01

The antigenotoxic effect of the aqueous extract of betel leaf (BL-ext.) against the pan masala was tested with the help of cytogenetic endpoints like chromosome aberration (CA) and sister chromatid exchange (SCE) utilizing Chinese hamster ovary (CHO) cells. Compared to the cultures treated with aqueous extract of pan masala alone, a reduction in CA and SCE frequencies in CHO cells was observed following a combined treatment with pan masala (with or without tobacco) extract and BL-ext. The protective effect of BL-ext. against the genomic damage caused by pan masala was statistically significant only after treating the cells for a longer period.

Real-Time Penetrating Particle Analyzer (PAN)

Science.gov (United States)

Wu, X.; Ambrosi, G.; Bertucci, B.

2018-02-01

The PAN can measure penetrating particles with great precision to study energetic particles, solar activities, and the origin and propagation of cosmic rays. The real-time monitoring of penetrating particles is crucial for deep space human travel.

Pan-Am seeks to salvage premature well investment

Energy Technology Data Exchange (ETDEWEB)

1965-01-18

Whether accelerated oil production should be permitted when a waterflood project has been delayed came up in a rare ''show cause'' hearing before the Alberta Oil and Gas Conservation Board, January 12. The Board ordered Pan American Petroleum Corp. to show cause why an order giving it 80-acre instead of 160-acre spacing in a 2,040-acre sector of the Pembina Oil Field should not be rescinded because of extensive delays in getting a related water flood scheme into operation. Pan Am has $750,000 tied up in infill wells drilled in November and December, following the new spacing unit order issued Sept. 29, 1964, said G.J. Last. Pan Am applied Nov. 24 for deferment of injection to July 1, 1965, because of delays in getting the unit agreement completed and ordering equipment. However it wants to produce the new wells, which are expected to average 20 bbl per day each in this marginal area. The board granted the deferment Dec. 29, but instituted the hearing on the question of interim producing rates.

Afro-Americans and Early Pan-Africanism

Science.gov (United States)

Contee, Clarence G.

1970-01-01

History of the Pan-African movement, the roles of W.E.B.Du Bois and Marcus Garvey in the movement activities, and the shift to African based leadership of the movement in the 1940's are discussed. (KG)

El Abasto de Pan en el Madrid del Siglo XVII Bread provision in seventeenth century Madrid

Directory of Open Access Journals (Sweden)

José Ignacio ANDRÉS UCENDO

2012-12-01

Full Text Available El mercado del pan era el más importante de los mercados de abastos, pero también el que contaba con el más complejo sistema de intervención. Los objetivos de la política de abastos eran asegurar un suministro continuo a precios estables y moderados.Los instrumentos incluían la regulación de los precios del grano y el pan, la provisión directa a través del pósito municipal y, en el caso de la corte, el pan de registro. En este trabajo examinamos la política de tasas, las disposiciones del gobierno y el comportamiento de los precios del pan en Madrid y del trigo en los mercados de origen.Bread market was the most important provision markets, so the complexity of intervention system. The aim of provision policy was to guarantee the continuous supply of bread at moderate and stable prices. The means included the regulation the price, the direct provision by the public granary and, in the case of the court, the named registered bread. This paper examines the tax policy, the government requirements and the movement of bread prices in Madrid and wheat prices in the markets of origin.

Pan-genome and phylogeny of Bacillus cereus sensu lato

OpenAIRE

Bazinet, Adam

2017-01-01

Background: Bacillus cereus sensu lato ( s . l .) is an ecologically diverse bacterial group of medical and agricultural significance. In this study, I use publicly available genomes to characterize the B. cereus s. l. pan-genome and perform the largest phylogenetic and population genetic analyses of this group to date in terms of the number of genes and taxa included. With these fundamental data in hand, I identify genes associated with particular phenotypic traits (i.e., "pan-GWAS" analysis...

PAN AIR: A computer program for predicting subsonic or supersonic linear potential flows about arbitrary configurations using a higher order panel method. Volume 2: User's manual (version 3.0)

Science.gov (United States)

Sidwell, Kenneth W.; Baruah, Pranab K.; Bussoletti, John E.; Medan, Richard T.; Conner, R. S.; Purdon, David J.

1990-01-01

A comprehensive description of user problem definition for the PAN AIR (Panel Aerodynamics) system is given. PAN AIR solves the 3-D linear integral equations of subsonic and supersonic flow. Influence coefficient methods are used which employ source and doublet panels as boundary surfaces. Both analysis and design boundary conditions can be used. This User's Manual describes the information needed to use the PAN AIR system. The structure and organization of PAN AIR are described, including the job control and module execution control languages for execution of the program system. The engineering input data are described, including the mathematical and physical modeling requirements. Version 3.0 strictly applies only to PAN AIR version 3.0. The major revisions include: (1) inputs and guidelines for the new FDP module (which calculates streamlines and offbody points); (2) nine new class 1 and class 2 boundary conditions to cover commonly used modeling practices, in particular the vorticity matching Kutta condition; (3) use of the CRAY solid state Storage Device (SSD); and (4) incorporation of errata and typo's together with additional explanation and guidelines.

"A Constant Transit of Finding": Fantasy as Realisation in "Pan's Labyrinth"

Science.gov (United States)

Clark, Roger; McDonald, Keith

2010-01-01

This article considers Guillermo Del Toro's "Pan's Labyrinth" as a text which utilises key codes and conventions of children's literature as a means of encountering the trauma of Fascism. The article begins by placing "Pan's Labyrinth" at a contextual crossroads involving fairy tale and a Spanish cinematic tradition and…

Wind Forecasting for Yacht Racing at the 1991 Pan American Games.

Science.gov (United States)

Powell, Mark D.

1993-01-01

The U.S. Sailing Team competed successfully at the 1991 Pan American Games despite having no previous experience with the sailing conditions off Havana, Cuba. One of the key factors in the team's success was meteorological support in the form of wind climate analysis; application of sea breeze forecasting typical of the south Florida area, modified by tropical weather systems; and effective preregatta briefing.

Malignancy risk estimation of screen-detected nodules at baseline CT: comparison of the PanCan model, Lung-RADS and NCCN guidelines

Energy Technology Data Exchange (ETDEWEB)

Riel, Sarah J. van; Ciompi, Francesco; Jacobs, Colin; Scholten, Ernst T.; Prokop, Mathias; Ginneken, Bram van [Radboud University Nijmegen Medical Center, Department of Radiology and Nuclear Medicine, Nijmegen (Netherlands); Winkler Wille, Mathilde M.; Naqibullah, Matiullah [University of Copenhagen, Department of Pulmonology Gentofte Hospital, Hellerup (Denmark); Lam, Stephen [British Columbia Cancer Agency, Department of Integrative Oncology, Vancouver, British Columbia (Canada); Schaefer-Prokop, Cornelia [Radboud University Nijmegen Medical Center, Department of Radiology and Nuclear Medicine, Nijmegen (Netherlands); Meander Medical Center, Department of Radiology, Amersfoort (Netherlands)

2017-10-15

To compare the PanCan model, Lung-RADS and the 1.2016 National Comprehensive Cancer Network (NCCN) guidelines for discriminating malignant from benign pulmonary nodules on baseline screening CT scans and the impact diameter measurement methods have on performances. From the Danish Lung Cancer Screening Trial database, 64 CTs with malignant nodules and 549 baseline CTs with benign nodules were included. Performance of the systems was evaluated applying the system's original diameter definitions: D{sup longest-C} (PanCan), D{sup meanAxial} (NCCN), both obtained from axial sections, and D{sup mean3D} (Lung-RADS). Subsequently all diameter definitions were applied uniformly to all systems. Areas under the ROC curves (AUC) were used to evaluate risk discrimination. PanCan performed superiorly to Lung-RADS and NCCN (AUC 0.874 vs. 0.813, p = 0.003; 0.874 vs. 0.836, p = 0.010), using the original diameter specifications. When uniformly applying D{sup longest-C}, D{sup mean3D} and D{sup meanAxial}, PanCan remained superior to Lung-RADS (p < 0.001 - p = 0.001) and NCCN (p < 0.001 - p = 0.016). Diameter definition significantly influenced NCCN's performance with D{sup longest-C} being the worst (D{sup longest-C} vs. D{sup mean3D}, p = 0.005; D{sup longest-C} vs. D{sup meanAxial}, p = 0.016). Without follow-up information, the PanCan model performs significantly superiorly to Lung-RADS and the 1.2016 NCCN guidelines for discriminating benign from malignant nodules. The NCCN guidelines are most sensitive to nodule size definition. (orig.)

Improved pan-specific prediction of MHC class I peptide binding using a novel receptor clustering data partitioning strategy

DEFF Research Database (Denmark)

Mattsson, Andreas Holm; Kringelum, Jens Vindahl; Garde, C.

2016-01-01

Pan-specific prediction of receptor-ligand interaction is conventionally done using machine-learning methods that integrates information about both receptor and ligand primary sequences. To achieve optimal performance using machine learning, dealing with overfitting and data redundancy is critical....... Most often so-called ligand clustering methods have been used to deal with these issues in the context of pan-specific receptor-ligand predictions, and the MHC system the approach has proven highly effective for extrapolating information from a limited set of receptors with well characterized binding...

Pan-specific MHC class I predictors: A benchmark of HLA class I pan-specific prediction methods

DEFF Research Database (Denmark)

Zhang, Hao; Lundegaard, Claus; Nielsen, Morten

2009-01-01

not previously been compared using independent evaluation sets. Results: A diverse set of quantitative peptide binding affinity measurements was collected from IEDB, together with a large set of HLA class I ligands from the SYFPEITHI database. Based on these data sets, three different pan-specific HLA web...

File list: NoD.Pan.20.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.Pan.20.AllAg.Pancreas mm9 No description Pancreas Pancreas ERX651337,ERX651340,...ERX651341,ERX651342 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.Pan.20.AllAg.Pancreas.bed ...

File list: NoD.Pan.05.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.Pan.05.AllAg.Pancreas mm9 No description Pancreas Pancreas ERX651337,ERX651340,...ERX651342,ERX651341 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.Pan.05.AllAg.Pancreas.bed ...

File list: NoD.Pan.10.AllAg.Pancreas [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.Pan.10.AllAg.Pancreas mm9 No description Pancreas Pancreas ERX651337,ERX651340,...ERX651342,ERX651341 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.Pan.10.AllAg.Pancreas.bed ...

Peroxyacetyl nitrate (PAN and peroxyacetic acid (PAA measurements by iodide chemical ionisation mass spectrometry: first analysis of results in the boreal forest and implications for the measurement of PAN fluxes

Directory of Open Access Journals (Sweden)

G. J. Phillips

2013-02-01

Full Text Available We describe measurements of peroxyacetyl nitrate (CH₃C(OO₂NO₂, PAN and peroxyacetic acid (CH₃C(OOOH, PAA in the Boreal forest using iodide chemical ionization mass spectrometry (ICIMS. The measurements were made during the Hyytiälä United Measurement of Photochemistry and Particles – Comprehensive Organic Particle and Environmental Chemistry (HUMPPA-COPEC-2010 measurement intensive. Mixing ratios of PAN and PAA were determined by measuring the acetate ion signal (CH₃C(OO⁻, m/z = 59 resulting from reaction of CH₃C(OO₂ (from the thermal dissociation of PAN or CH₃C(OOOH with iodide ions using alternatively heated and ambient temperature inlet lines. During some periods of high temperature (~ 30 °C and low NO_x (< 1 ppbv, PAA mixing ratios were similar to, or exceeded those of PAN and thus contributed a significant fraction of the total acetate signal. PAA is thus a potential interference for ICIMS measurements of PAN, and especially eddy covariance flux measurements in environments where the PAA flux is likely to be a significant proportion of the (short timescale acetate ion variability. Within the range of mixing ratios of NO_x measured during HUMPPA-COPEC, the modelled ratio of PAA-to-PAN was found to be sensitive to temperature (through the thermal decomposition rate of PAN and the HO₂ mixing ratio, thus providing some constraint to estimates of photochemical activity and oxidation rates in the Boreal environment.

Eddy covariance fluxes of acyl peroxy nitrates (PAN, PPN and MPAN above a Ponderosa pine forest

Directory of Open Access Journals (Sweden)

G. M. Wolfe

2009-01-01

Full Text Available During the Biosphere Effects on AeRosols and Photochemistry EXperiment 2007 (BEARPEX-2007, we observed eddy covariance (EC fluxes of speciated acyl peroxy nitrates (APNs, including peroxyacetyl nitrate (PAN, peroxypropionyl nitrate (PPN and peroxymethacryloyl nitrate (MPAN, above a Ponderosa pine forest in the western Sierra Nevada. All APN fluxes are net downward during the day, with a median midday PAN exchange velocity of −0.3 cm s⁻¹; nighttime storage-corrected APN EC fluxes are smaller than daytime fluxes but still downward. Analysis with a standard resistance model shows that loss of PAN to the canopy is not controlled by turbulent or molecular diffusion. Stomatal uptake can account for 25 to 50% of the observed downward PAN flux. Vertical gradients in the PAN thermal decomposition (TD rate explain a similar fraction of the flux, suggesting that a significant portion of the PAN flux into the forest results from chemical processes in the canopy. The remaining "unidentified" portion of the net PAN flux (~15% is ascribed to deposition or reactive uptake on non-stomatal surfaces (e.g. leaf cuticles or soil. Shifts in temperature, moisture and ecosystem activity during the summer – fall transition alter the relative contribution of stomatal uptake, non-stomatal uptake and thermochemical gradients to the net PAN flux. Daytime PAN and MPAN exchange velocities are a factor of 3 smaller than those of PPN during the first two weeks of the measurement period, consistent with strong intra-canopy chemical production of PAN and MPAN during this period. Depositional loss of APNs can be 3–21% of the gross gas-phase TD loss depending on temperature. As a source of nitrogen to the biosphere, PAN deposition represents approximately 4–19% of that due to dry deposition of nitric acid at this site.

Exploring the emotional appeal of green and social Europe myths among pan-European Union organisations

DEFF Research Database (Denmark)

Lynggaard, Kennet

2017-01-01

: (1) pan-EU NGOs are receptive to political myths, including in the short term; (2) pan-EU NGOs contribute to the reproduction of myths, especially already-institutionalised myths and myths that resonate with their sectoral activities; and (3) pan-EU NGOs strategically use political myths to justify...

The indicative map of the pan-European ecological network in Western Europe : technical background report

NARCIS (Netherlands)

Jongman, R.H.G.; Bouwma, I.M.; Doorn, van A.M.

2006-01-01

The Pan European Ecological Network for Western Europe is the third project in developing the Pan European Ecological Network The objective of the Pan-European Ecological Network is to develop a vision for a coherent network of high value areas for biodiversity, as internationally and nationally

Pan-Domain Analysis of ZIP Zinc Transporters

Directory of Open Access Journals (Sweden)

Laura E. Lehtovirta-Morley

2017-12-01

Full Text Available The ZIP (Zrt/Irt-like protein family of zinc transporters is found in all three domains of life. However, little is known about the phylogenetic relationship amongst ZIP transporters, their distribution, or their origin. Here we employed phylogenetic analysis to explore the evolution of ZIP transporters, with a focus on the major human fungal pathogen, Candida albicans. Pan-domain analysis of bacterial, archaeal, fungal, and human proteins revealed a complex relationship amongst the ZIP family members. Here we report (i a eukaryote-wide group of cellular zinc importers, (ii a fungal-specific group of zinc importers having genetic association with the fungal zincophore, and, (iii a pan-kingdom supercluster made up of two distinct subgroups with orthologues in bacterial, archaeal, and eukaryotic phyla.

Targeting the HER family with Pan-HER effectively overcomes resistance to cetuximab

Science.gov (United States)

Iida, Mari; Bahrar, Harsh; Brand, Toni M; Pearson, Hannah E; Coan, John P; Orbuch, Rachel A; Flanigan, Bailey G; Swick, Adam D; Prabakaran, Prashanth; Lantto, Johan; Horak, Ivan D.; Kragh, Michael; Salgia, Ravi; Kimple, Randy J; Wheeler, Deric L

2016-01-01

Cetuximab, an antibody against the Epidermal Growth Factor Receptor (EGFR) has shown efficacy in treating head and neck squamous cell carcinoma (HNSCC), metastatic colorectal cancer and non-small cell lung cancer (NSCLC). Despite the clinical success of cetuximab, many patients do not respond to cetuximab. Furthermore, virtually all patients who do initially respond become refractory, highlighting both intrinsic and acquired resistance to cetuximab as significant clinical problems. To understand mechanistically how cancerous cells acquire resistance, we previously developed models of acquired resistance using the H226 NSCLC and UM-SCC1 HNSCC cell lines. Cetuximab-resistant clones showed a robust upregulation and dependency on the HER family receptors EGFR, HER2 and HER3. Here, we examined Pan-HER, a mixture of six antibodies targeting these receptors on cetuximab-resistant clones. In cells exhibiting acquired or intrinsic resistance to cetuximab, Pan-HER treatment decreased all three receptors’ protein levels and down-stream activation of AKT and MAPK. This correlated with decreased cell proliferation in cetuximab-resistant clones. To determine whether Pan-HER had a therapeutic benefit in vivo, we established de novo cetuximab-resistant mouse xenografts and treated resistant tumors with Pan-HER. This regimen resulted in a superior growth delay of cetuximab-resistant xenografts compared to mice continued on cetuximab. Furthermore, intrinsically cetuximab-resistant HNSCC patient-derived xenograft tumors treated with Pan-HER exhibited significant growth delay compared to vehicle/cetuximab controls. These results suggest that targeting HER family receptors simultaneously with Pan-HER is a promising treatment strategy for tumors displaying intrinsic or acquired resistance to cetuximab. PMID:27422810

Comparing infant and juvenile behavior in bonobos (Pan paniscus) and chimpanzees (Pan troglodytes): a preliminary study.

Science.gov (United States)

De Lathouwers, Mieke; Van Elsacker, Linda

2006-10-01

The dichotomy between the two Pan species, the bonobo (Pan paniscus) and chimpanzee (Pan troglodytes) has been strongly emphasized until very recently. Given that most studies were primarily based on adult individuals, we shifted the "continuity versus discontinuity" discussion to the infant and juvenile stage. Our aim was to test quantitatively, some conflicting statements made in literature considering species differences between immature bonobos and chimpanzees. On one hand it is suggested that infant bonobos show retardation in motor and social development when compared with chimpanzees. Additionally it is expected that the weaning process is more traumatic to chimpanzee than bonobo infants. But on the other hand the development of behaviors is expected to be very similar in both species. We observed eight mother-infant pairs of each species in several European zoos. Our preliminary research partially confirms that immature chimpanzees seem spatially more independent, spending more time at a larger distance from their mother than immature bonobos. However, the other data do not seem to support the hypothesis that bonobo infants show retardation of motor or social development. The development of solitary play, environmental exploration, social play, non-copulatory mounts and aggressive interactions do not differ between the species. Bonobo infants in general even groom other group members more than chimpanzee infants. We also found that older bonobo infants have more nipple contact than same aged chimpanzees and that the weaning process seems to end later for bonobos than for immature chimpanzee. Additionally, although immature bonobos show in general more signs of distress, our data suggest that the weaning period itself is more traumatic for chimpanzees.

PanFP: pangenome-based functional profiles for microbial communities.

Science.gov (United States)

Jun, Se-Ran; Robeson, Michael S; Hauser, Loren J; Schadt, Christopher W; Gorin, Andrey A

2015-09-26

For decades there has been increasing interest in understanding the relationships between microbial communities and ecosystem functions. Current DNA sequencing technologies allows for the exploration of microbial communities in two principle ways: targeted rRNA gene surveys and shotgun metagenomics. For large study designs, it is often still prohibitively expensive to sequence metagenomes at both the breadth and depth necessary to statistically capture the true functional diversity of a community. Although rRNA gene surveys provide no direct evidence of function, they do provide a reasonable estimation of microbial diversity, while being a very cost-effective way to screen samples of interest for later shotgun metagenomic analyses. However, there is a great deal of 16S rRNA gene survey data currently available from diverse environments, and thus a need for tools to infer functional composition of environmental samples based on 16S rRNA gene survey data. We present a computational method called pangenome-based functional profiles (PanFP), which infers functional profiles of microbial communities from 16S rRNA gene survey data for Bacteria and Archaea. PanFP is based on pangenome reconstruction of a 16S rRNA gene operational taxonomic unit (OTU) from known genes and genomes pooled from the OTU's taxonomic lineage. From this lineage, we derive an OTU functional profile by weighting a pangenome's functional profile with the OTUs abundance observed in a given sample. We validated our method by comparing PanFP to the functional profiles obtained from the direct shotgun metagenomic measurement of 65 diverse communities via Spearman correlation coefficients. These correlations improved with increasing sequencing depth, within the range of 0.8-0.9 for the most deeply sequenced Human Microbiome Project mock community samples. PanFP is very similar in performance to another recently released tool, PICRUSt, for almost all of survey data analysed here. But, our method is unique

Isotopic composition of atmospheric moisture from pan water evaporation measurements.

Science.gov (United States)

Devi, Pooja; Jain, Ashok Kumar; Rao, M Someshwer; Kumar, Bhishm

2015-01-01

A continuous and reliable time series data of the stable isotopic composition of atmospheric moisture is an important requirement for the wider applicability of isotope mass balance methods in atmospheric and water balance studies. This requires routine sampling of atmospheric moisture by an appropriate technique and analysis of moisture for its isotopic composition. We have, therefore, used a much simpler method based on an isotope mass balance approach to derive the isotopic composition of atmospheric moisture using a class-A drying evaporation pan. We have carried out the study by collecting water samples from a class-A drying evaporation pan and also by collecting atmospheric moisture using the cryogenic trap method at the National Institute of Hydrology, Roorkee, India, during a pre-monsoon period. We compared the isotopic composition of atmospheric moisture obtained by using the class-A drying evaporation pan method with the cryogenic trap method. The results obtained from the evaporation pan water compare well with the cryogenic based method. Thus, the study establishes a cost-effective means of maintaining time series data of the isotopic composition of atmospheric moisture at meteorological observatories. The conclusions drawn in the present study are based on experiments conducted at Roorkee, India, and may be examined at other regions for its general applicability.

Thrusting and transpressional shearing in the Pan-African nappe southwest El-Sibai core complex, Central Eastern Desert, Egypt

Science.gov (United States)

El-Wahed, Mohamed A. Abd.

2008-01-01

The Wadi El-Shush area in the Central Eastern Desert (CED) of Egypt is occupied by the Sibai core complex and its surrounding Pan-African nappe complex. The sequence of metamorphic and structural events in the Sibai core complex and the enveloping Pan-African nappe can be summarized as follows: (1) high temperature metamorphism associated with partial melting of amphibolites and development of gneissic and migmatitic rocks, (2) between 740 and 660 Ma, oblique island arc accretion resulted in Pan-African nappe emplacement and the intrusion of syn-tectonic gneissic tonalite at about 680 ± 10 Ma. The NNW-SSE shortening associated with oblique island arc accretion produced low angle NNW-directed thrusts and open folds in volcaniclastic metasediments, schists and isolated serpentinite masses (Pan-African nappe) and created NNE-trending recumbent folds in syn-tectonic granites. The NNW-SSE shortening has produced imbricate structures and thrust duplexes in the Pan-African nappe, (3) NE-ward thrusting which deformed the Pan-African nappe into SW-dipping imbricate slices. The ENE-WSW compression event has created NE-directed thrusts, folded the NNW-directed thrusts and produced NW-trending major and minor folds in the Pan-African nappe. Prograde metamorphism (480-525 °C at 2-4.5 kbar) was synchronous with thrusting events, (4) retrograde metamorphism during sinistral shearing along NNW- to NW-striking strike-slip shear zones (660-580 Ma), marking the external boundaries of the Sibai core complex and related to the Najd Fault System. Sinistral shearing has produced steeply dipping mylonitic foliation and open plunging folds in the NNW- and NE-ward thrust planes. Presence of retrograde metamorphism supports the slow exhumation of Sibai core complex under brittle-ductile low temperature conditions. Arc-accretion caused thrusting, imbrication and crustal thickening, whereas gravitational collapse of a compressed and thickened lithosphere initiated the sinistral movement

Form gene clustering method about pan-ethnic-group products based on emotional semantic

Science.gov (United States)

Chen, Dengkai; Ding, Jingjing; Gao, Minzhuo; Ma, Danping; Liu, Donghui

2016-09-01

The use of pan-ethnic-group products form knowledge primarily depends on a designer's subjective experience without user participation. The majority of studies primarily focus on the detection of the perceptual demands of consumers from the target product category. A pan-ethnic-group products form gene clustering method based on emotional semantic is constructed. Consumers' perceptual images of the pan-ethnic-group products are obtained by means of product form gene extraction and coding and computer aided product form clustering technology. A case of form gene clustering about the typical pan-ethnic-group products is investigated which indicates that the method is feasible. This paper opens up a new direction for the future development of product form design which improves the agility of product design process in the era of Industry 4.0.

A Portable Burn Pan for the Disposal of Excess Propellants

Science.gov (United States)

2016-06-01

2013 - 06/01/2016 A Portable Burn Pan for the Disposal of Excess Propellants Michael Walsh USA CRREL USA CRREL 72 Lyme Road Hanover, NH 03755...Army Alaska XRF X-Ray Florescence vii ACKNOWLEDGEMENTS Project ER-201323, A Portable Burn Pan for the Disposal of Gun Propellants, was a very...contamination problem while allowing troops to train as they fight, we have developed a portable training device for burning excess gun propellants. 1.1

An algorithm of a real time image tracking system using a camera with pan/tilt motors on an embedded system

Science.gov (United States)

Kim, Hie-Sik; Nam, Chul; Ha, Kwan-Yong; Ayurzana, Odgeral; Kwon, Jong-Won

2005-12-01

The embedded systems have been applied to many fields, including households and industrial sites. The user interface technology with simple display on the screen was implemented more and more. The user demands are increasing and the system has more various applicable fields due to a high penetration rate of the Internet. Therefore, the demand for embedded system is tend to rise. An embedded system for image tracking was implemented. This system is used a fixed IP for the reliable server operation on TCP/IP networks. Using an USB camera on the embedded Linux system developed a real time broadcasting of video image on the Internet. The digital camera is connected at the USB host port of the embedded board. All input images from the video camera are continuously stored as a compressed JPEG file in a directory at the Linux web-server. And each frame image data from web camera is compared for measurement of displacement Vector. That used Block matching algorithm and edge detection algorithm for past speed. And the displacement vector is used at pan/tilt motor control through RS232 serial cable. The embedded board utilized the S3C2410 MPU, which used the ARM 920T core form Samsung. The operating system was ported to embedded Linux kernel and mounted of root file system. And the stored images are sent to the client PC through the web browser. It used the network function of Linux and it developed a program with protocol of the TCP/IP.

The Rise of Pan-Islamism in Britain

National Research Council Canada - National Science Library

Shepard, Scott

2006-01-01

.... This thesis explains what is fueling the rise of pan-Islamism in Britain. For many Muslims, their religious identity is stronger than their British identity because they are alienated from the rest of society...

Pan Am tar sand bid revealed

Energy Technology Data Exchange (ETDEWEB)

Gray, E

1968-12-16

Muskeg Oil Co., wholly-owned subsidiary of Pan American Canada Oil Co. Ltd., hopes to expand its proposed initial 8,000 bpd in situ Athabasca tar sand production scheme to an ultimate rate of 60,000 bpd. The Muskeg recovery process involves an in situ combustion technique developed by Pan American and applied successfully in experimental work in the Athabasca area. The underground burning process develops heat in the formation, reduces crude bitumen viscosity, and displaces the bitumen to the producing wells. Core analyses have been used to determine bitumen in place, wherever possible. Values for uncored wells were based on logs, through development of an empirical relationship between formation resistivity measured by focused logging devices and bitumen content determined by core analysis. The proposed recovery process is a 10-acre well spacing with 9-spot configuration. The McMurray Formation will be fractured hydraulically and preheated by a combustion process. The bitumen will be recovered by a combustion displacement process utilizing air and water.

File list: Unc.Pan.50.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.Pan.50.AllAg.Pancreatic_cancer_cells mm9 Unclassified Pancreas Pancreatic cancer... cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.Pan.50.AllAg.Pancreatic_cancer_cells.bed ...

Evaluation of polyacrylonitrile (PAN) as a binding polymer for absorbers used to treat liquid radioactive wastes

International Nuclear Information System (INIS)

Sebesta, F.; John, J.; Motl, A.; Stamberg, K.

1995-11-01

The chemical and radiation stability of polyacrylonitrile (PAN) in the form of beads (B-PAN), similar to the beads of composite absorbers, and one selected composite absorber (ammonium molybdophosphate, the active component in PAN binder [AMP-PAN], a prospective candidate for the treatment of acidic wastes) were studied. Aqueous 1M HNO 3 + 1M NaNO 3 , 1M NaOH + 1M NaNO 3 , and 1M NaOH were chosen as simulants of DOE acidic and alkaline wastes. In addition,radiation stability was determined indistilled water. The chemical stability of B-PAN and AMP-PAN beads was tested for a period up to one month of contact with the solution at ambient temperature. The radiation stability of the beads was checked in a radiation dose range 10 3 --10 6 Gy (10 5 --10 8 rads). In acidic solutions the stability of PAN binder was proved not to be limited by either chemical or radiation decomposition. PAN binder may thus be used for preparing composite absorbers for treatment of acid wastes from DOE facilities. The same conclusion is valid for alkaline solutions with pH up to 13. In highly alkaline solutions (concentration of NAOH higher than I M) and in the presence of NaNO 3 , the stability of the tested polyacrylonitrile polymer was sufficient for applications not extending over 10 days. Cross-linking of the polymer caused by ionizing radiation was found to have a positive influence on chemical stability. This effect enables a longer period of applicability of PAN-based composite absorbers. Because of the high sorption rate achievable with PAN-based absorbers, the stability achieved is sufficient for most applications in the DOE complex. The chemical stability of binding polymer may also be further improved by testing another, more suitable type of polymer from the broad family of polyacrylonitrile polymers

File list: His.Pan.20.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.Pan.05.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.Pan.10.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.Pan.50.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.Pan.50.AllAg.PANC-1 hg19 Histone Pancreas PANC-1 SRX825369,SRX101484,SRX825383,...SRX152077,SRX190044,SRX825390,SRX825376,SRX101485 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.Pan.50.AllAg.PANC-1.bed ...

Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray

DEFF Research Database (Denmark)

Willenbrock, Hanni; Hallin, Peter Fischer; Wassenaar, Trudy

2007-01-01

of the same species are rapidly becoming available, allowing for the definition and characterization of a whole species as a population of genomes - the 'pan-genome'. Results: Using 32 Escherichia coli and Shigella genome sequences we estimate the pan- and core genome of the species. We designed a high...

Trends in pan evaporation and actual evapotranspiration across the conterminous U.S.: paradoxical or complementary?

Science.gov (United States)

Michael T. Hobbins; Jorge A. Ramirez; Thomas C. Brown

2004-01-01

Pan evaporation (ETpan) has decreased at 64% of pans in the conterminous U.S. over the past half-century. Comparing trends in ETpan and water budget-derived actual evapotranspiration (ET*a), we observe the so-called ‘‘Pan Evaporation Paradox,’’ which we confirm is no more than a...

File list: His.Pan.20.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.Pan.20.AllAg.Pancreatic_cancer_cells mm9 Histone Pancreas Pancreatic cancer cel...ls http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.Pan.20.AllAg.Pancreatic_cancer_cells.bed ...

File list: His.Pan.10.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.Pan.10.AllAg.Pancreatic_cancer_cells mm9 Histone Pancreas Pancreatic cancer cel...ls http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.Pan.10.AllAg.Pancreatic_cancer_cells.bed ...

File list: Pol.Pan.50.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.50.AllAg.Pancreatic_cancer_cells mm9 RNA polymerase Pancreas Pancreatic cancer... cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.Pan.50.AllAg.Pancreatic_cancer_cells.bed ...

File list: His.Pan.50.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.Pan.50.AllAg.Pancreatic_cancer_cells mm9 Histone Pancreas Pancreatic cancer cel...ls http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.Pan.50.AllAg.Pancreatic_cancer_cells.bed ...

File list: Pol.Pan.05.RNA_polymerase_III.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.05.RNA_polymerase_III.AllCell hg19 RNA polymerase RNA polymerase III Pancre...as http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.Pan.05.RNA_polymerase_III.AllCell.bed ...

File list: Pol.Pan.10.RNA_Polymerase_III.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.10.RNA_Polymerase_III.AllCell mm9 RNA polymerase RNA Polymerase III Pancrea...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.Pan.10.RNA_Polymerase_III.AllCell.bed ...

File list: DNS.Pan.20.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.Pan.10.RNA_polymerase_III.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.10.RNA_polymerase_III.AllCell hg19 RNA polymerase RNA polymerase III Pancre...as http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.Pan.10.RNA_polymerase_III.AllCell.bed ...

Properties and Structure of In Situ Transformed PAN-Based Carbon Fibers

Directory of Open Access Journals (Sweden)

Jingjing Cao

2018-06-01

Full Text Available Carbon fibers in situ prepared during the hot-pressed sintering in a vacuum is termed in situ transformed polyacrylonitrile-based (PAN-based carbon fibers, and the fibrous precursors are the pre-oxidized PAN fibers. The properties and structure of in situ transformed PAN-based carbon fibers are investigated by Nano indenter, SEM, TEM, XRD, and Raman. The results showed that the microstructure of the fiber surface layer was compact, while the core was loose, with evenly-appearing microvoids. The elastic modulus and nanohardness of the fiber surface layer (303.87 GPa and 14.82 GPa were much higher than that of the core (16.57 GPa and 1.54 GPa, and its interlayer spacing d002 and crystallinity were about 0.347 nm and 0.97 respectively. It was found that the preferred orientation of the surface carbon layers with ordered carbon atomic arrangement tended to be parallel to the fiber axis, whereas the fiber core in the amorphous region exhibited a random texture and the carbon atomic arrangement was in a disordered state. It indicates that the in situ transformed PAN-based carbon fibers possess significantly turbostratic structure and anisotropy.

Addressing Air Pollution and Greenhouse Gas Emissions in the Pan-Japan Sea Region. An Overview of Economic Instruments

International Nuclear Information System (INIS)

Boyle, G.; Kambu, A.

2005-11-01

The health and environmental impacts of fossil fuel consumption are of increasing concern to countries in the Pan-Japan Sea region, where economic growth has led to increased energy consumption in recent years. Economic instruments like green taxes and emissions-trading schemes represent important tools to help reduce air pollution and greenhouse gas (GHG) emissions in China, Japan, South Korea and Russia. Over the past several years, OECD countries have made progress in the use of economic instruments to reduce atmospheric air pollution. In Europe, new environmental taxes have been used most extensively, while in the United States market creation and emissions-trading schemes are more common. In the Pan-Japan Sea region, there has been considerable experience with pollution charge and levy systems, including the longstanding Japanese sulfur levy and the Russian and Chinese pollution charge systems. Generally, tax and emissions-trading systems are only beginning to emerge in the region although China has been experimenting with SOx emissions-trading schemes for several years now and South Korea and Japan have already begun experimenting with CO2 emissions-trading schemes. Only Japan has seriously looked at a carbon tax to curb GHG emissions among the four countries while direct subsidies for cleaner technologies have been adopted in the different Pan-Japan Sea countries. The costs and benefits of different economic instruments like taxes, charges, emissions-trading schemes and subsidies vary from case to case because they all have to be financially feasible, rest on informed and competent public institutions and perform effectively in local market and economic conditions. On top of all these is the fact that their overall success depends on their political acceptability. Given the experience of Pan-Japan Sea countries with economic instruments so far vis-a-vis the lessons learned in OECD countries and the nature of current and emerging pollution problems in Pan

File list: ALL.Pan.50.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: ALL.Pan.20.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: ALL.Pan.10.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.Pan.10.RNA_polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.10.RNA_polymerase_II.AllCell hg19 RNA polymerase RNA polymerase II Pancreas... SRX190244 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.Pan.10.RNA_polymerase_II.AllCell.bed ...

File list: Pol.Pan.50.RNA_polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.50.RNA_polymerase_II.AllCell hg19 RNA polymerase RNA polymerase II Pancreas... SRX190244 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.Pan.50.RNA_polymerase_II.AllCell.bed ...

File list: Pol.Pan.05.RNA_polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.Pan.05.RNA_polymerase_II.AllCell hg19 RNA polymerase RNA polymerase II Pancreas... SRX190244 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.Pan.05.RNA_polymerase_II.AllCell.bed ...

Analyses of the soil surface dynamic of South African Kalahari salt pans based on hyperspectral and multitemporal data

Science.gov (United States)

Milewski, Robert; Chabrillat, Sabine; Behling, Robert; Mielke, Christian; Schleicher, Anja Maria; Guanter, Luis

2016-04-01

The consequences of climate change represent a major threat to sustainable development and growth in Southern Africa. Understanding the impact on the geo- and biosphere is therefore of great importance in this particular region. In this context the Kalahari salt pans (also known as playas or sabkhas) and their peripheral saline and alkaline habitats are an ecosystem of major interest. They are very sensitive to environmental conditions, and as thus hydrological, mineralogical and ecological responses to climatic variations can be analysed. Up to now the soil composition of salt pans in this area have been only assessed mono-temporally and on a coarse regional scale. Furthermore, the dynamic of the salt pans, especially the formation of evaporites, is still uncertain and poorly understood. High spectral resolution remote sensing can estimate evaporite content and mineralogy of soils based on the analyses of the surface reflectance properties within the Visible-Near InfraRed (VNIR 400-1000 nm) and Short-Wave InfraRed (SWIR 1000-2500 nm) regions. In these wavelength regions major chemical components of the soil interact with the electromagnetic radiation and produce characteristic absorption features that can be used to derive the properties of interest. Although such techniques are well established for the laboratory and field scale, the potential of current (Hyperion) and upcoming spaceborne sensors such as EnMAP for quantitative mineralogical and salt spectral mapping is still to be demonstrated. Combined with hyperspectral methods, multitemporal remote sensing techniques allow us to derive the recent dynamic of these salt pans and link the mineralogical analysis of the pan surface to major physical processes in these dryland environments. In this study we focus on the analyses of the Namibian Omongwa salt pans based on satellite hyperspectral imagery and multispectral time-series data. First, a change detection analysis is applied using the Iterative

Development of pan-Arctic database for river chemistry

Science.gov (United States)

McClelland, J.W.; Holmes, R.M.; Peterson, B.J.; Amon, R.; Brabets, T.; Cooper, L.; Gibson, J.; Gordeev, V.V.; Guay, C.; Milburn, D.; Staples, R.; Raymond, P.A.; Shiklomanov, I.; Striegl, Robert G.; Zhulidov, A.; Gurtovaya, T.; Zimov, S.

2008-01-01

More than 10% of all continental runoff flows into the Arctic Ocean. This runoff is a dominant feature of the Arctic Ocean with respect to water column structure and circulation. Yet understanding of the chemical characteristics of runoff from the pan-Arctic watershed is surprisingly limited. The Pan- Arctic River Transport of Nutrients, Organic Matter, and Suspended Sediments ( PARTNERS) project was initiated in 2002 to help remedy this deficit, and an extraordinary data set has emerged over the past few years as a result of the effort. This data set is publicly available through the Cooperative Arctic Data and Information Service (CADIS) of the Arctic Observing Network (AON). Details about data access are provided below.

File list: ALL.Pan.05.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.05.AllAg.Pancreatic_cancer_cells mm9 All antigens Pancreas Pancreatic cancer... cells SRX174586,SRX174585,SRX174587 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.05.AllAg.Pancreatic_cancer_cells.bed ...

File list: Oth.Pan.20.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.20.AllAg.Pancreatic_cancer_cells mm9 TFs and others Pancreas Pancreatic cancer... cells SRX174585,SRX174586 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.20.AllAg.Pancreatic_cancer_cells.bed ...

File list: Oth.Pan.05.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.Pan.05.AllAg.Pancreatic_cancer_cells mm9 TFs and others Pancreas Pancreatic cancer... cells SRX174586,SRX174585 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.Pan.05.AllAg.Pancreatic_cancer_cells.bed ...

File list: ALL.Pan.50.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.Pan.50.AllAg.Pancreatic_cancer_cells mm9 All antigens Pancreas Pancreatic cancer... cells SRX174585,SRX174586,SRX174587 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.Pan.50.AllAg.Pancreatic_cancer_cells.bed ...

Share your sweets: Chimpanzee (Pan troglodytes) and bonobo (Pan paniscus) willingness to share highly attractive, monopolizable food sources.

Science.gov (United States)

Byrnit, Jill T; Høgh-Olesen, Henrik; Makransky, Guido

2015-08-01

All over the world, humans (Homo sapiens) display resource-sharing behavior, and common patterns of sharing seem to exist across cultures. Humans are not the only primates to share, and observations from the wild have long documented food sharing behavior in our closest phylogenetic relatives, chimpanzees (Pan troglodytes) and bonobos (Pan paniscus). However, few controlled studies have been made in which groups of Pan are introduced to food items that may be shared or monopolized by a first food possessor, and very few studies have examined what happens to these sharing patterns if the food in question is a highly attractive, monopolizable food source. The one study to date to include food quality as the independent variable used different types of food as high- and low-value items, making differences in food divisibility and size potentially confounding factors. It was the aim of the present study to examine the sharing behavior of groups of captive chimpanzees and bonobos when introducing the same type of food (branches) manipulated to be of 2 different degrees of desirability (with or without syrup). Results showed that the large majority of food transfers in both species came about as sharing in which group members were allowed to cofeed or remove food from the stock of the food possessor, and the introduction of high-value food resulted in more sharing, not less. Food sharing behavior differed between species in that chimpanzees displayed significantly more begging behavior than bonobos. Bonobos, instead, engaged in sexual invitations, which the chimpanzees never did. (PsycINFO Database Record (c) 2015 APA, all rights reserved).

Nonintrusive iris image acquisition system based on a pan-tilt-zoom camera and light stripe projection

Science.gov (United States)

Yoon, Soweon; Jung, Ho Gi; Park, Kang Ryoung; Kim, Jaihie

2009-03-01

Although iris recognition is one of the most accurate biometric technologies, it has not yet been widely used in practical applications. This is mainly due to user inconvenience during the image acquisition phase. Specifically, users try to adjust their eye position within small capture volume at a close distance from the system. To overcome these problems, we propose a novel iris image acquisition system that provides users with unconstrained environments: a large operating range, enabling movement from standing posture, and capturing good-quality iris images in an acceptable time. The proposed system has the following three contributions compared with previous works: (1) the capture volume is significantly increased by using a pan-tilt-zoom (PTZ) camera guided by a light stripe projection, (2) the iris location in the large capture volume is found fast due to 1-D vertical face searching from the user's horizontal position obtained by the light stripe projection, and (3) zooming and focusing on the user's irises at a distance are accurate and fast using the estimated 3-D position of a face by the light stripe projection and the PTZ camera. Experimental results show that the proposed system can capture good-quality iris images in 2.479 s on average at a distance of 1.5 to 3 m, while allowing a limited amount of movement by the user.

Using Of Learning Vector Quantization Network for Pan Evaporation Estimation

Directory of Open Access Journals (Sweden)

Kamil7 A. Abdulmohsen

2013-05-01

Full Text Available A modern technique is presented to study the evaporation process which is considered as an important component of the hydrological cycle. The Pan Evaporation depth is estimated depending upon four metrological factors viz. (temperature, relative humidity, sunshine, and wind speed. Unsupervised Artificial Neural Network has been proposed to accomplish the study goal, specifically, a type called Linear Vector Quantitization, (LVQ.  A step by step method is used to cope with difficulties that usually associated with computation procedures inherent in these kind of networks. Such systematic approach may close the gap between the hesitation of the user to make use of the capabilities of these type of neural networks and the relative complexity involving the computations procedures. The results reveal the possibility of using LVQ for of Pan Evaporation depth estimation where a good agreement has been noticed between the outputs of the proposed network and the observed values of the Pan Evaporation depth with a correlation coefficient of 0.986. 

Provenance analysis and thermo-dynamic studies of multi-type Holocene duricrusts (1700 BC) in the Sua Salt Pan, NE Botswana

Science.gov (United States)

Dill, Harald G.; Dohrmann, R.; Kaufhold, S.; Techmer, A.

2014-08-01

Multi-type duricrusts, composed of silcretes, calcretes, halcretes and sulcretes developed during the Holocene at the northern rim of the Sua Salt Pan, NE Botswana. They were investigated for their light (quartz/chalcedony, feldspar, analcime, clinoptilolite, calcite, kaolinite/halloysite, illite-smectite mixed-layers, halite) and heavy minerals (baryte, clinozoisite-epidote s.s.s., amphibole, corundum, tourmaline, ilmenite, rutile, sphene, kyanite, andalusite, staurolite, garnet, zircon, apatite, monazite, cassiterite, garnet, biotite) using petrographic microscopy, X-ray fluorescence and diffraction analyses, radio-carbon dating, scanning electron microscopy equipped with an EDX-system, cation exchange capacity and infrared spectroscopy. Detrital minerals predominantly derived from the erosion of rocks belonging to the Archaean Basement Complex, the Stormberg Volcanites and the Kalahari sediments. Of particular interest to exploration geologists, geikielite-enriched ilmenite fragments are a hint to kimberlitic pipes. Biodetritus was derived from invertebrates and from vertebrates (fish bones?). A man-made impact on the heavy mineral suite has to be invoked from small fragments of cassiterite fragments that derived from processing of sulfidic and pegmatitic Sn-bearing ore. In the salt-pan-derived duricrusts mainly the aeolian and to a lesser degree fluvial inputs were responsible for the concentration of clasts in these multi-type duricrusts. Moreover, their variegated mineralogy enables us to constrain the physical-chemical regime, prevalently as to the pH and the chemical composition of the major constituents. All duricrusts developed in a self-sufficient chemically closed system where quartz and feldspar provided the elements Si, Na, K, Ca, and Ba to produce the encrustations. The spatial and temporal trend in the Sua Salt Pan rim encrustations may be described as follows: (1) sulcrete-silcretes, (2) silcretes with kaolinite-group minerals towards more recent

Phamacognostical Evaluation and Determination of Total Phenols of Paeonia sinjiangensis K. Y. Pan

Directory of Open Access Journals (Sweden)

H. Y. Gong

2012-01-01

Full Text Available Paeonia sinjiangensis K. Y. Pan is a perennial herb belonging to the family Ranunculaceae which is one of the most important crude drugs in traditional Chinese medicine, used as an anti-inflammatory, analgesic and sedative agent. This paper deals with the detailed pharmacognostical evaluation of the crude drug P. sinjiangensis K. Y. Pan. The microscopic, physico-chemical, preliminary physicochemical parameters, total phenols contents presented in this paper may be proposed as parameters to establish the authenticity of P. sinjiangensis K. Y. Pan and can possibly help to differentiate the drug from its other species.

File list: Oth.Pan.20.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.Pan.50.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.Pan.05.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.Pan.10.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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Contribution IFJ PAN to the construction of the Wendelstein 7-X stellarator (2008 - 2009)

International Nuclear Information System (INIS)

Blocki, J.; Hajduk, L.; Kotula, J.; Stodulski, M.; Sulek, Z.

2010-05-01

The Wendelstein 7-X stellarator is now being assembled at the Max Planck Institute for Plasma Physic (IPP), Greifswald, Germany. The Agreement on Cooperation between the Max-Planck-Institut fur Plasmaphysik in Garching and the Henryk Niewodniczanski Institute of Nuclear Physics Polish Academy of Sciences in Krakow (IFJ PAN) was signed off in 2007. The intention of the agreement is to cover the whole period of the W7-X construction. According to the agreement IFJ PAN has taken over the following tasks: 1. to assembly of the bus bar system powering the superconducting coils of the stellarator; 2. to take part in design of equipment used during handling, transportation and assembly of outer vessels; 3. to manufacture 30 polichromators used for plasma diagnostics. Task No 2 was completed in 2008 while tasks No 1 and 3 are to be continued. (authors)

PERFORMING MANHOOD: GLAHN AND THE MASCULINITY CRISIS IN HAMSUN'S PAN

Directory of Open Access Journals (Sweden)

Chengzhou He

2016-04-01

Full Text Available In Hamsun’s novel Pan, Lieutenant Glahn holds an essentialist notion of masculinity that is somewhat outdated in the context of emerging Norwegian modernity. His acts of violence, which are performative of his male pride, not only bring harm to others, but also become destructive to himself. The masculinity crisis enacted in Pan is put into the context of the social, historical, and cultural changes related to gender and modernity that occurred during the end of the 19th century in Norway and beyond.

The indicative map of the pan-European ecological network in Western Europe : technical background report

OpenAIRE

Jongman, R.H.G.; Bouwma, I.M.; Doorn, van, A.M.

2006-01-01

The Pan European Ecological Network for Western Europe is the third project in developing the Pan European Ecological Network The objective of the Pan-European Ecological Network is to develop a vision for a coherent network of high value areas for biodiversity, as internationally and nationally protected areas in combination with other suitable habitat areas for long term favourable conservation of Europe’s key ecosystems, habitats and species

The development of pan-African food forecasting and the exploration of satellite-based precipitation estimates

NARCIS (Netherlands)

Thiemig, Vera

2014-01-01

The main objective of this PhD is to contribute to the development of a pan-African flood forecasting system in order to enhance flood forecasting for the whole of Africa. In view of the dimension and complexity of this goal, this research focused on particular aspects of flood forecasting,

Exploring the dynamics of bacterial community composition in soil: the pan-bacteriome approach.

Science.gov (United States)

Bacci, Giovanni; Ceccherini, Maria Teresa; Bani, Alessia; Bazzicalupo, Marco; Castaldini, Maurizio; Galardini, Marco; Giovannetti, Luciana; Mocali, Stefano; Pastorelli, Roberta; Pantani, Ottorino Luca; Arfaioli, Paola; Pietramellara, Giacomo; Viti, Carlo; Nannipieri, Paolo; Mengoni, Alessio

2015-03-01

We performed a longitudinal study (repeated observations of the same sample over time) to investigate both the composition and structure of temporal changes of bacterial community composition in soil mesocosms, subjected to three different treatments (water and 5 or 25 mg kg(-1) of dried soil Cd(2+)). By analogy with the pan genome concept, we identified a core bacteriome and an accessory bacteriome. Resident taxa were assigned to the core bacteriome, while occasional taxa were assigned to the accessory bacteriome. Core and accessory bacteriome represented roughly 35 and 50 % of the taxa detected, respectively, and were characterized by different taxonomic signatures from phylum to genus level while 15 % of the taxa were found to be unique to a particular sample. In particular, the core bacteriome was characterized by higher abundance of members of Planctomycetes, Actinobacteria, Verrucomicrobia and Acidobacteria, while the accessory bacteriome included more members of Firmicutes, Clamydiae and Proteobacteria, suggesting potentially different responses to environmental changes of members from these phyla. We conclude that the pan-bacteriome model may be a useful approach to gain insight for modeling bacterial community structure and inferring different abilities of bacteria taxa.

Control of Pan-tilt Mechanism Angle using Position Matrix Method

Directory of Open Access Journals (Sweden)

Hendri Maja Saputra

2013-12-01

Full Text Available Control of a Pan-Tilt Mechanism (PTM angle for the bomb disposal robot Morolipi-V2 using inertial sensor measurement unit, x-IMU, has been done. The PTM has to be able to be actively controlled both manually and automatically in order to correct the orientation of the moving Morolipi-V2 platform. The x-IMU detects the platform orientation and sends the result in order to automatically control the PTM. The orientation is calculated using the quaternion combined with Madwick and Mahony filter methods. The orientation data that consists of angles of roll (α, pitch (β, and yaw (γ from the x-IMU are then being sent to the camera for controlling the PTM motion (pan & tilt angles after calculating the reverse angle using position matrix method. Experiment results using Madwick and Mahony methods show that the x-IMU can be used to find the robot platform orientation. Acceleration data from accelerometer and flux from magnetometer produce noise with standard deviation of 0.015 g and 0.006 G, respectively. Maximum absolute errors caused by Madgwick and Mahony method with respect to Xaxis are 48.45º and 33.91º, respectively. The x-IMU implementation as inertia sensor to control the Pan-Tilt Mechanism shows a good result, which the probability of pan angle tends to be the same with yaw and tilt angle equal to the pitch angle, except a very small angle shift due to the influence of roll angle..

RNA-Seq of Tumor-Educated Platelets Enables Blood-Based Pan-Cancer, Multiclass, and Molecular Pathway Cancer Diagnostics.

Science.gov (United States)

Best, Myron G; Sol, Nik; Kooi, Irsan; Tannous, Jihane; Westerman, Bart A; Rustenburg, François; Schellen, Pepijn; Verschueren, Heleen; Post, Edward; Koster, Jan; Ylstra, Bauke; Ameziane, Najim; Dorsman, Josephine; Smit, Egbert F; Verheul, Henk M; Noske, David P; Reijneveld, Jaap C; Nilsson, R Jonas A; Tannous, Bakhos A; Wesseling, Pieter; Wurdinger, Thomas

2015-11-09

Tumor-educated blood platelets (TEPs) are implicated as central players in the systemic and local responses to tumor growth, thereby altering their RNA profile. We determined the diagnostic potential of TEPs by mRNA sequencing of 283 platelet samples. We distinguished 228 patients with localized and metastasized tumors from 55 healthy individuals with 96% accuracy. Across six different tumor types, the location of the primary tumor was correctly identified with 71% accuracy. Also, MET or HER2-positive, and mutant KRAS, EGFR, or PIK3CA tumors were accurately distinguished using surrogate TEP mRNA profiles. Our results indicate that blood platelets provide a valuable platform for pan-cancer, multiclass cancer, and companion diagnostics, possibly enabling clinical advances in blood-based "liquid biopsies". Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

File list: InP.Pan.05.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.Pan.10.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.Pan.20.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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Initial Burn Pan (JMTF) Testing Results

Science.gov (United States)

2016-03-01

burn pan and one located high on the Ex-USS Shadwell. There were also a number of GoPro cameras (3-4) that were positioned to observe specific...locations around the test area. A remote control drone equipped with a GoPro camera was also used to video the third test. All recorded video and still

Analysis of α-particle induced incomplete chromosome aberrations, using pan-centro metric and pan-telomeric DNA probes

International Nuclear Information System (INIS)

Mestres, M.; Schmid, E.; Stephan, G.; Barrios, L.; Caballin, M. R.; Barquinero, J. F.

2004-01-01

The aim of the present study has been the evaluation of the incompleteness of α-particle induced chromosome aberrations by the simultaneous detection of all centromeres and telomeres present in human lymphocytes. For this purpose attached lymphocytes were irradiated at doses of 0.2, 0.5,0.7 and 1 Gy in a ''241Am source. FISH techniques were applied using pan-centromeric and pan-telomeric probes. All abnormal cells were digitalised and analysed using a Cytovision FISH workstation. A total of 378 incomplete chromosomes plus incomplete acentrics was found. Cases with more than 92 telomeres were not detected. The ratio between total incomplete elements and multicentrics was 1.00. The total number of acentric fragments was 822; 57% of then were complete fragments ace (+.+), 26% incomplete fragments ace (+,-), and 17% interstitial fragment ace (-.-). The percentage of incomplete aberrations is higher after high-LET than described for low-LET exposure. The results seem to indicate that compared to low-LET. after α-particle exposure it is more likely to repair the centromere-containing elements. (Author) 30 refs

Diagnostic systems for the nuclear fusion and plasma research in the PF-24 plasma focus laboratory at the IFJ PAN

Directory of Open Access Journals (Sweden)

Marciniak Łukasz

2016-12-01

Full Text Available This paper presents a set of diagnostics dedicated to PF-24 - new medium size - plasma focus (PF device built and operated at the Institute of Nuclear Physics Polish Academy of Sciences (IFJ PAN. The PF-24 can operate at energy level up to 93 kJ and charging voltage up to 40 kV. Each condenser is connected with a specially designed spark gap with a very small jitter, which ensures a high effi ciency and a low current rise time. The working parameters of PF-24 generator make it a suitable tool for testing new detection systems to be used in fusion research. Four types of such detection systems are presented in this article: three diagnostic systems used to measure electric quantities (Rogowski coil, magnetic probe, capacitance probe, neutron counter based on beryllium activation, fast neutron pinhole camera based on small-area BCF-12 plastic scintillation detectors and high-speed four-frame soft X-ray camera with microchannel plate.

HASIL RANCANG BANGUN SISTEM ERP DENGAN SDLC MODEL WATERFALL: STUDI KASUS SISTEM INVENTORI PT PAN BROTHERS, TBK.

OpenAIRE

Harijanto Pangestu; Hendra Alianto; Santo F. Wijaya

2012-01-01

Competition in the business world effects the use of information technology. To achieve competitive advantage in the global competition, PT Pan Brothers, Tbk. should establish an integrated information system based on ERP (Enterprise Resource Planning). With the ERP system, information will be accurate and up-todate to support strategic decision making. It takes conscientious planning in building the ERP system. Management information systems development projects have a very important role. O...

File list: NoD.Pan.10.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.Pan.10.AllAg.Pancreatic_cancer_cells mm9 No description Pancreas Pancreatic cancer... cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.Pan.10.AllAg.Pancreatic_cancer_cells.bed ...

Seasonality of Peroxyacetyl nitrate (PAN in the upper troposphere and lower stratosphere using the MIPAS-E instrument

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D. P. Moore

2010-07-01

Full Text Available The Michelson Interferometer for Passive Atmospheric Sounding onboard ENVISAT (MIPAS–E offers the opportunity to detect and spectrally resolve many atmospheric minor constituents affecting atmospheric chemistry. In this paper, we retrieve global, seasonal PAN volume mixing ratio (vmr data from MIPAS-E measurements made in January, March, August and October 2003 and present results from this scheme between approximately 300 and 150 hPa. The total error on a single PAN retrieval is better than 20% outside the tropics and better than 50% in the tropics where uncertainties in water vapor dominate the total error budget. We observe clear differences in the seasonal cycle of PAN in our data, linked closely to biomass burning regions and growing seasons. Highest Northern Hemisphere mid-latitude PAN vmrs were observed in August (300–600 pptv on average compared with the January and October data (less than 250 pptv on average. In the March 2003 data we observe highest PAN vmrs in the tropics with evidence of vmrs between 600 and 1000 pptv over Eastern Asia and over the Central Pacific at 333 hPa. The vertical distribution of PAN as a function of latitude (i.e. the zonal mean highlights the strong inter-annual variability of PAN in the upper troposphere and lower stratosphere (UTLS, most pronounced poleward of 40° N (up to 400 pptv over the year. The variability of PAN in the tropical UTLS is also significant and we derive a variability of up to 250 pptv in the averages between January and October 2003. These results represent the first seasonal observations of PAN in the UTLS.

File list: InP.Pan.50.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.Pan.20.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.Pan.20.AllAg.PANC-1 hg19 Input control Pancreas PANC-1 SRX101486,SRX190309,SRX1...50696,SRX190252,SRX644404,SRX199860,SRX190029 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.Pan.20.AllAg.PANC-1.bed ...

File list: InP.Pan.05.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.Pan.05.AllAg.PANC-1 hg19 Input control Pancreas PANC-1 SRX190309,SRX101486,SRX1...50696,SRX190252,SRX644404,SRX190029,SRX199860 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.Pan.05.AllAg.PANC-1.bed ...

File list: InP.Pan.10.AllAg.PANC-1 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.Pan.10.AllAg.PANC-1 hg19 Input control Pancreas PANC-1 SRX190309,SRX101486,SRX1...50696,SRX190252,SRX644404,SRX199860,SRX190029 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.Pan.10.AllAg.PANC-1.bed ...

PEMIKIRAN DAN PERGERAKAN PAN ISLAMISME DI INDONESIA PADA AWAL ABAD KE-20

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Abdul Somad

2015-11-01

Full Text Available Tulisan ini mengambil topik tentang wacana pemikiran dan gerakan Pan Islamisme di Indonesia pada perempat pertama abad ke-20. Permasalahan yang muncul adalah bagaimana konsepsi Pan Islamisme menurut kaum muslim Indonesia dan bagaimana bentuk aksi-aksi Pan Islamisme yang pernah mereka lakukan, baik dalam negeri maupun di luar negeri.Metode yang dipakai dalam penulisan tulisan ini adalah metode sejarah. Metode ini meliputi empat tahapan, yaitu heuristik, kritik, interpretasi, dan historiografi.Pemikiran dan gerakan Pan Islamisme di Indonesia dilandasi oleh kesadaran kaum muslim untuk mewujudkan persatuan dan kesatuan umat Islam. Di dalam negeri, keinginan itu diupayakan dalam Kongres Al-Islam Hindia Timur. Dalam kongres ini berkumpul sejumlah organisasi massa Islam. Mereka melakukan dialog keagamaan guna mencari akar-akar persamaan di antara mereka, dan memahami perbedaan masing-masing dalam soal-soal agama yang bersifat cabang. Sementara itu, di luar negeri, kaum muslim Indonesia merasa perlu melibatkan diri dalam pergerakan khilafah dan persoalan tanah suci Makkah-Madinah yang dibicarakan pada tahun 1926 lewat Kongres Islam Sedunia yang di selenggarakan di Timur Tengah. Keterlibatan mereka dalam persoalan-persoalan Dunia Islam ini sebagai bagian dari usaha kaum muslim Indonesia untuk turut aktif dalam mempersatukan umat Islam sedunia.

File list: InP.Pan.05.AllAg.Pancreatic_cancer_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.Pan.05.AllAg.Pancreatic_cancer_cells mm9 Input control Pancreas Pancreatic cancer... cells SRX174587 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.Pan.05.AllAg.Pancreatic_cancer_cells.bed ...

Campylobacter in chicken livers and their destruction by pan frying.

Science.gov (United States)

Whyte, R; Hudson, J A; Graham, C

2006-12-01

To enumerate Campylobacter spp. on the external surface and internal portions of chicken livers, and to assess the cooking required to inactivate naturally present cells. Of 30 livers tested all yielded Campylobacter spp. on their surfaces and 90% were found to contain the organism in internal tissue. Four (13%) livers contained >10(4) MPN campylobacters, and an additional seven (23%) contained >10(3) MPN campylobacters per liver. The internal temperature of pan-fried livers under the conditions used reached a maximum of 70-80 degrees C, and maintaining this temperature for 2-3 min was necessary to inactivate naturally occurring Campylobacter spp. All isolates identified were either C. jejuni or C. coli. Chicken livers represent a potential source of human campylobacteriosis as they contained >10(4) MPN per liver in 13% of the samples tested. Pan-frying can produce an acceptable product that is safe to eat. SIGNIFICANCE AND IMPACT OF THIS STUDY: The data provided can be used in exposure assessments of Campylobacter in poultry products in terms of both quantitative data and assessing pan-frying and its ability to destroy campylobacters.

File list: InP.Pan.20.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.Pan.20.Input_control.AllCell mm9 Input control Input control Pancreas SRX188611...035142,SRX751762,SRX751759,SRX751765,SRX751768,SRX327162,SRX672452,SRX327163 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.Pan.20.Input_control.AllCell.bed ...

Characterization of clays used in the fabrication of traditional brazilian ceramic pans: culture and technique

International Nuclear Information System (INIS)

Borlini, Monica Castoldi; Aguiar, Mariane Costalonga de; Vieira, Carlos Mauricio Fontes; Monteiro, Sergio Neves

2009-01-01

The fabrication process of clay pans in the state of Espirito Santo, southeast of Brazil, is a recognized part of the country's popular culture. In Goiabeiras, a district of the state capital Vitoria, the traditional production of these pans is the source of income for many families. The technique used in these ceramic pans is of indigenous origin, characterized by manual molding, outdoor burning and application of tannin dye. The clay pans are distributed to several Brazilian states and are nowadays conquering the external market. In producing these pans, two types of, yellow and gray, clays are used. The actual source of raw material comes from the deposit of the Mulemba valley, where a concern on the possibility of exhaustion exists. The objective of this study was then to characterize these two types of clays and so contribute to the continuity of traditional clay pan production by knowing the characteristics of the local clays in case of an eventual need for their replacement. Chemical analysis, X-ray diffraction, particle size distribution, plasticity and thermal analysis of the clays were performed. The results showed that the clays are high plasticity kaolinite with considerable amounts of SiO 2 and Al 2 O 3 as well as of alkaline oxides, earth alkaline oxides and Fe 2 O 3 . (author)

Cross-linked PAN-based thin-film composite membranes for non-aqueous nanofiltration

KAUST Repository

Pérez-Manríquez, Liliana

2015-01-01

A new approach on the development of cross-linked PAN based thin film composite (TFC) membranes for non-aqueous application is presented in this work. Polypropylene backed neat PAN membranes fabricated by phase inversion process were cross-linked with hydrazine to get excellent solvent stability toward dimethylformamide (DMF). By interfacial polymerization a selective polyamide active layer was coated over the cross-linked PAN using N,N′-diamino piperazine (DAP) and trimesoyl chloride (TMC) as monomers. Permeation and molecular weight cut off (MWCO) experiments using various dyes were done to evaluate the performance of the membranes. Membranes developed by such method show excellent solvent stability toward DMF with a permeance of 1.7 L/m2 h bar and a molecular weight cut-off of less than 600 Da.

A new two-Dimensional Physical Basis for the Complementary Relation Between Terrestrial and pan Evaporation

Science.gov (United States)

Pettijohn, J. C.; Salvucci, G. D.

2008-12-01

Archived global measurements of water loss from evaporation pans constitute an important indirect measure of evaporative flux. Historical data from evaporation pans shows a decreasing trend over the last half century, but the relationship between pan evaporation and moisture-limited terrestrial evaporation is complex, leading to ambiguities in the interpretation of this data. Under energy-limited conditions, pan evaporation (Epan) and moisture-limited terrestrial evaporation (E) increase or decrease together, while in moisture- limited conditions these fluxes form a complementary relation in which increases in one rate accompany decreases in the other. This has lead to debate about the meaning of the observed trends in the context of changing climate. Here a two-dimensional numerical model of a wet pan in a drying landscape is used to demonstrate that, over a wide range of realistic atmospheric and surface conditions, the influence that changes in E have on Epan (1) are complementary and linear, (2) do not depend upon surface wind speed, and (3) are strikingly asymmetrical, in that a unit decrease in E causes approximately a five-fold increase in Epan, as found in a recent analysis of daily evaporation from US grasslands (Kahler and Brutsaert, 2006). Previous attempts to explain the CR have been based on one dimensional diffusion and energy balance arguments, leading to analytic solutions based on Penman-type bulk difference equations. But without acknowledging the spatially complex multidimensional humidity and temperature field around the pan, and specifically how these fields change as the contrast between the wet pan and the drying land surface increases, such integrated bulk difference equations are a priori incomplete (they ignore important divergence terms), and thus these explanations must be considered physically incomplete. Results of the present study improve the theoretical foundation of the CR, thus increasing the reliability with which it can be

Present status of preparation to the Pan-Orthodox Council

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Biskup Jerzy Pańkowski

2014-11-01

Full Text Available The article begins from explanation of the meaning (from the point of view of the Orthodox Church of the word „catholic” as one of the ontological attributes of the Church. Than the author presents the examples of the different kinds of meetings of Church hierarchs on the highest level and its titles/names.Than the article gives a short presentation of the initiative and history of the convene of Pan-Orthodox Council. The idea of that kind of meeting was born in the beginning of XX century on Ecumenical Patriarchate.The preparation to the Pan-Orthodox Council lasts many yearsand contains of many different kind of meetings. Meetings of the special commission that consists of representatives of each Autocephaly Orthodox Church concentrate on the different topics. During last meetings several important topics were discussed, as: Orthodox Diaspora, Autonomy and the methods of its granting, Autocephaly and the methods of its grantingand Diptychs. The author, who took part in some of these meeting,explains the positions of the various Churches in these matters as well asshares his opinions on them.In conclusion the author presents the opinion that despite many different problems on the way to prepare the Pan-Orthodox Council, this idea can be realized even in the near future.

THE CHOSEN INSTRUMENT? RECONSIDERING THE EARLY RELATIONSHIP BETWEEN PAN AMERICAN AIRWAYS AND THE U.S. GOVERNMENT

Directory of Open Access Journals (Sweden)

Erik Benson

2004-01-01

Full Text Available During the late I920s and early 1930s, Pan American Airways became known as the U.S. “chosen instrument” for international commercial aviation. Most scholarly work about the U.S. government/Pan Am relationship presents the airline as the government’s instrument. This article challenges this traditional perspective. In certain ways Pan Am was an “instrument,” yet in others it defied such categorization. Thus, any notion that Pan Am was a “chosen instrument” merits qualification. Drawing upon the “corporatist” historical model, this study will present a more sophisticated account of this relationship, one that considers the role of business elites in shaping U.S. policy.

PAN SHARPENING QUALITY INVESTIGATION OF TURKISH IN-OPERATION REMOTE SENSING SATELLITES: APPLICATIONS WITH RASAT AND GÖKTÜRK-2 IMAGES

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M. Ozendi

2016-10-01

The aim of this study is to investigate pan-sharpening performance of RASAT and GÖKTÜRK-2 images. For this purpose, pan-sharpened images are generated using most popular pan-sharpening methods IHS, Brovey and PCA at first. This procedure is followed by quantitative evaluation of pan-sharpened images using Correlation Coefficient (CC, Root Mean Square Error (RMSE, Relative Average Spectral Error (RASE, Spectral Angle Mapper (SAM and Erreur Relative Globale Adimensionnelle de Synthése (ERGAS metrics. For generation of pan-sharpened images and computation of metrics SharpQ tool is used which is developed with MATLAB computing language. According to metrics, PCA derived pan-sharpened image is the most similar one to multispectral image for RASAT, and Brovey derived pan-sharpened image is the most similar one to multispectral image for GÖKTÜRK-2. Finally, pan-sharpened images are evaluated qualitatively in terms of object availability and completeness for various land covers (such as urban, forest and flat areas by a group of operators who are experienced in remote sensing imagery.

Advanced stabilization of PAN fibers for fabrication of carbon fibers by e-beam irradiation

International Nuclear Information System (INIS)

Jeun, Joon Pyo; Kim, Du Young; Shin, Hye Kyoung; Kang, Phil Hyun; Park, Jung Ki

2012-01-01

In recent years, the carbon fiber industry has been growing rapidly to meet the demand from efferent industries such as aerospace, military, turbine blades, light weight cylinders and pressure vessels. Generally, carbon fibers are manufactured by a controlled pyrolysis of stabilized precursor fiber such as polyacrylonitrile (PAN). In the stabilization step, the linear PAN molecules are first converted to cyclic structure. However, cyclization is a very complicated process and there are still differences of opinion on the reaction mechanisms. Photo-induced crosslinking and stabilization of PAN via ion beam, X-ray, gamma ray and UV irradiation has been reported in the literature. However, the process required a long stabilization time. In this work, a new and highly effective method of pretreatment PAN precursor fiber was described. The effect of the e-beam on the stabilization process of the fibers was investigated using differential scanning calorimeter (DSC) and X-ray diffraction (XRD) measurement

THE FIRST HIGH-REDSHIFT QUASAR FROM Pan-STARRS

Energy Technology Data Exchange (ETDEWEB)

Morganson, Eric; De Rosa, Gisella; Decarli, Roberto; Walter, Fabian; Rix, Hans-Walter [Max-Planck-Institut fuer Astronomie, Koenigstuhl 17, 69117 Heidelberg (Germany); Chambers, Ken; Burgett, William; Flewelling, Heather; Hodapp, Klaus; Kaiser, Nick; Magnier, Eugene; Sweeney, Bill; Waters, Christopher [Institute for Astronomy, University of Hawaii at Manoa, Honolulu, HI 96822 (United States); McGreer, Ian; Fan, Xiaohui [Steward Observatory, University of Arizona, 933 N Cherry Ave., Tucson, AZ 85721 (United States); Greiner, Jochen [Max-Planck-Institut fuer extraterrestrische Physik, Giessenbachstrasse 1, 85748 Garching (Germany); Price, Paul, E-mail: morganson@mpia.de [Princeton University Observatory, 4 Ivy Lane, Peyton Hall, Princeton University, Princeton, NJ 08544 (United States)

2012-06-15

We present the discovery of the first high-redshift (z > 5.7) quasar from the Panoramic Survey Telescope and Rapid Response System 1 (Pan-STARRS1 or PS1). This quasar was initially detected as an i{sub P1} dropout in PS1, confirmed photometrically with the SAO Wide-field InfraRed Camera at Arizona's Multiple Mirror Telescope (MMT) and the Gamma-Ray Burst Optical/Near-Infrared Detector at the MPG 2.2 m telescope in La Silla. The quasar was verified spectroscopically with the MMT Spectrograph, Red Channel and the Cassegrain Twin Spectrograph at the Calar Alto 3.5 m telescope. Its near-infrared spectrum was taken at the Large Binocular Telescope Observatory (LBT) with the LBT Near-Infrared Spectroscopic Utility with Camera and Integral Field Unit for Extragalactic Research. It has a redshift of 5.73, an AB z{sub P1} magnitude of 19.4, a luminosity of 3.8 Multiplication-Sign 10{sup 47} erg s{sup -1}, and a black hole mass of 6.9 Multiplication-Sign 10{sup 9} M{sub Sun }. It is a broad absorption line quasar with a prominent Ly{beta} peak and a very blue continuum spectrum. This quasar is the first result from the PS1 high-redshift quasar search that is projected to discover more than 100 i{sub P1} dropout quasars and could potentially find more than 10 z{sub P1} dropout (z > 6.8) quasars.

THE FIRST HIGH-REDSHIFT QUASAR FROM Pan-STARRS

International Nuclear Information System (INIS)

Morganson, Eric; De Rosa, Gisella; Decarli, Roberto; Walter, Fabian; Rix, Hans-Walter; Chambers, Ken; Burgett, William; Flewelling, Heather; Hodapp, Klaus; Kaiser, Nick; Magnier, Eugene; Sweeney, Bill; Waters, Christopher; McGreer, Ian; Fan, Xiaohui; Greiner, Jochen; Price, Paul

2012-01-01

We present the discovery of the first high-redshift (z > 5.7) quasar from the Panoramic Survey Telescope and Rapid Response System 1 (Pan-STARRS1 or PS1). This quasar was initially detected as an i P1 dropout in PS1, confirmed photometrically with the SAO Wide-field InfraRed Camera at Arizona's Multiple Mirror Telescope (MMT) and the Gamma-Ray Burst Optical/Near-Infrared Detector at the MPG 2.2 m telescope in La Silla. The quasar was verified spectroscopically with the MMT Spectrograph, Red Channel and the Cassegrain Twin Spectrograph at the Calar Alto 3.5 m telescope. Its near-infrared spectrum was taken at the Large Binocular Telescope Observatory (LBT) with the LBT Near-Infrared Spectroscopic Utility with Camera and Integral Field Unit for Extragalactic Research. It has a redshift of 5.73, an AB z P1 magnitude of 19.4, a luminosity of 3.8 × 10 47 erg s –1 , and a black hole mass of 6.9 × 10 9 M ☉ . It is a broad absorption line quasar with a prominent Lyβ peak and a very blue continuum spectrum. This quasar is the first result from the PS1 high-redshift quasar search that is projected to discover more than 100 i P1 dropout quasars and could potentially find more than 10 z P1 dropout (z > 6.8) quasars.

Hypoglycemia revealing arachnoidocele in infant | Jellouli | Pan ...

African Journals Online (AJOL)

The patient was treated with hydrocortisone, levothyroxine and growth hormone replacement. The outcome was favorable without recourse to neurosurgery at the lack of damage to the optic nerve and the sphenoid bone, with a decline of five years otherwise the child has a delay in psychomotor acquisitions. Pan African ...

Pan-European management of electricity portfolios: Risks and opportunities of contract bundling

International Nuclear Information System (INIS)

Gampert, Markus; Madlener, Reinhard

2011-01-01

Due to the liberalization of energy markets in the European Union, today's European utilities not only focus on electricity supply, but also offer exchange-traded 'structured products' or portfolio management for unbundling financial and physical risk positions. Many utilities are only able to provide these services in their domestic markets. In a globalized economy, the need for a centrally organized pan-European portfolio management has arisen, as it allows a simplified commodity sourcing in combination with an optimized risk management. In this paper, we examine the challenges to be overcome for establishing a European-wide bundling of electricity contracts. For this purpose, a case study based on the business perspective of RWE Supply and Trading in Central and Eastern Europe is carried out. In a first step, we analyze general requirements for a pan-European bundling of electricity contracts. Then, RWE's situation in Europe is examined, based on which we finally propose a concept to meet customer demands in Central and Eastern Europe. - Research highlights: → Analysis of electricity market liberalization in Central and Eastern Europe. → Identification of requirements and problems for pan-European bundling of contracts. → Case study based on RWE Supply and Trading perspective in Central and Eastern Europe. → Model development for pan-European unbundling of financial/physical risk positions.

Surface properties of poly(acrylonitrile) (PAN) precipitation polymerized in supercritical CO2 and the influence of the molecular weight.

Science.gov (United States)

Shen, Qing; Gu, Qing-Feng; Hu, Jian-Feng; Teng, Xin-Rong; Zhu, Yun-Feng

2003-11-15

In this paper, the surface properties, e.g., the total surface free energy and the related Lifshitz-van der Waals and Lewis acid-base components, of polyacrylonitrile (PAN) precipitation polymerized in supercritical CO(2) have been characterized. Moreover, the influence of molecular weight varying has been also investigated. Results show that the surface properties of PAN resulting from supercritical CO(2) are different from those obtained by the conventional method. Of these data, one important finding is that the supercritical CO(2) PAN seems to decrease the surface free energy with the increased molecular weight. Based on previous recorded NMR spectra of this PAN and especially compared to commercial PAN, such phenomena are discussed and ascribed to an increase of the H-bonds and a reduction of the isotacticity in the supercritical CO(2) condition for PAN.

Does pan diameter influence carbon monoxide levels during heating of water to boiling point with a camping stove?

Science.gov (United States)

Leigh-Smith, Simon; Stevenson, Richard; Watt, Martin; Watt, Ian; McFadyen, Angus; Grant, Stan

2004-01-01

To determine whether pan diameter influences carbon monoxide (CO) concentration during heating of water to boiling point with a camping stove. The hypothesis was that increasing pan diameter increases CO concentration because of greater flame dispersal and a larger flame. This was a randomized, prospective study. A Coleman Dual Fuel 533 stove was used to heat pans of water to boiling point, with CO concentration monitored every 30 seconds for 5 minutes. The stove was inside a partially ventilated 200-L cardboard box model that was inside an environmental chamber at -6 degrees C. Water temperature, water volume, and flame characteristics were all standardized. Ten trials were performed for each of 2 pan diameters (base diameters of 165 mm [small] and 220 mm [large]). There was a significant difference (P = .002) between the pans for CO levels at each measurement interval from 60 seconds onward. These differences were markedly larger after 90 seconds, with a mean difference of 185 ppm (95% CI 115, 276 ppm) for all the results from 120 seconds onwards. This study has shown that there is significantly higher CO production with a large-diameter pan compared with a small-diameter pan. These findings were evident by using a camping stove to heat water to boiling point when a maximum blue flame was present throughout. Thus, in enclosed environments it is recommended that small-diameter pans be used in an attempt to prevent high CO levels.

Characterization of PAN/ATO nanocomposites prepared by solution ...

Indian Academy of Sciences (India)

Conducting nanocomposites of polyacrylonitrile (PAN) and antimony-doped tin oxide (ATO) were prepared by solution blending. Electrical properties of the nanocomposites were characterized by means of electrical conductivity measurements and the phase structures were investigated via scanning electron microscopy ...

JUSCELINO KUBITSCHEK AND THE PAN-AMERICAN OPERATION (1956-1961

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Silvana Aline Soares Simon

2012-09-01

Full Text Available This article aims to analyse Juscelino Kubitschek’s period, which had the national development as an important characteristic, based on the association with foreign capital. In terms of foreign policy, the period between 1954 and 1958 was characterized by the return to autonomy and active bargaining against the United States. This situation changed at the end of this period, when there were difficulties in attracting foreign investment and there was a slowdown in growth, with the launch of Pan-American Operation. It was a multilateral initiative and showed a new phase of the Brazilian diplomacy, which would culminate in the Independent Foreign Policy. Keywords: Brazilian Foreign Policy, Juscelino Kubitschek, National Development, Pan American Operation, Relationship with the United States.

Optimal location of dry ports in the Pan-Pearl River Delta

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Wu Qitao

2017-01-01

Full Text Available Dry ports have become a very important part of globalization and a cornerstone in port competitiveness. Based on the analytic hierarchy process, this paper established the dry port index system to evaluate the potential location of dry ports linked to the port system in the Pearl River Delta, in a case study covering 115 cities in the Pan - Pearl River Delta. The results show that it is optimal to locate 21 dry ports in the research region, and each dry port serves different areas. There are 4 optimal transport corridors for the dry port logistic network, including Guangzhou- Kunming transport corridor, Guangzhou-Chengdu transport corridor, Guangzhou-Changsha transport corridor and Shenzhen-Nanchang transport corridor.

Observations of peroxyacetyl nitrate (PAN) in the upper troposphere by the Atmospheric Chemistry Experiment-Fourier Transform Spectrometer (ACE-FTS)

Science.gov (United States)

Tereszchuk, K. A.; Moore, D. P.; Harrison, J. J.; Boone, C. D.; Park, M.; Remedios, J. J.; Randel, W. J.; Bernath, P. F.

2013-06-01

Peroxyacetyl nitrate (CH3CO·O2NO2, abbreviated as PAN) is a trace molecular species present in the troposphere and lower stratosphere due primarily to pollution from fuel combustion and the pyrogenic outflows from biomass burning. In the lower troposphere, PAN has a relatively short lifetime and is principally destroyed within a few hours through thermolysis, but it can act as a reservoir and carrier of NOx in the colder temperatures of the upper troposphere, where UV photolysis becomes the dominant loss mechanism. Pyroconvective updrafts from large biomass burning events can inject PAN into the upper troposphere and lower stratosphere (UTLS), providing a means for the long-range transport of NOx. Given the extended lifetimes at these higher altitudes, PAN is readily detectable via satellite remote sensing. A new PAN data product is now available for the Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) version 3.0 data set. We report observations of PAN in boreal biomass burning plumes recorded during the BORTAS (quantifying the impact of BOReal forest fires on Tropospheric oxidants over the Atlantic using Aircraft and Satellites) campaign (12 July to 3 August 2011). The retrieval method employed by incorporating laboratory-recorded absorption cross sections into version 3.0 of the ACE-FTS forward model and retrieval software is described in full detail. The estimated detection limit for ACE-FTS PAN is 5 pptv, and the total systematic error contribution to the ACE-FTS PAN retrieval is ~ 16%. The retrieved volume mixing ratio (VMR) profiles are compared to coincident measurements made by the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) instrument on the European Space Agency (ESA) Environmental Satellite (ENVISAT). The MIPAS measurements demonstrated good agreement with the ACE-FTS VMR profiles for PAN, where the measured VMR values are well within the associated measurement errors for both instruments and comparative

Gerhart Panning (1900-1944): a German forensic pathologist and his involvement in Nazi crimes during Second World War.

Science.gov (United States)

Preuss, Johanna; Madea, Burkhard

2009-03-01

Twenty years after the Second World War the public were made aware of War Crimes committed by the German forensic pathologist, Gerhart Panning (1900-1944). From 1942 till 1944, Panning was professor at the Institute of Forensic Medicine at the University of Bonn. Panning died of tuberculosis on 22 March 1944. After the Second World War, Panning's widow tried to obtain denazification for her husband. There were no particularly serious doubts. In 1965, Konrad Graf von Moltke, the son of Helmuth James Graf von Moltke (1907-1944), presented to the court a private letter from his father to his mother. In this letter, written in 1941, Panning's experiments on Soviet prisoners are described. In the so-called Callsen trial in the court of Darmstadt from 1960 to 1968, the experiments were confirmed by witnesses. In 1941, Panning performed experiments in cooperation with the Sicherheitsstaffel (Nazi special police) in the Ukraine to prove that captured ammunition of the soviet infantry violated international law. For this purpose, different parts of the bodies of living Soviets were used as firing targets. He published the results of these experiments in a scientific journal without any evidence of the origin of these observations. In this article, Panning's life and crimes have been described.

PAN-Immobilized PVC-NPOE Membrane for Environmentally Friendly Sensing of Cd(II Ions

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Moersilah Moersilah

2017-04-01

Full Text Available A simple, cheap and environmentally friendly analytical method of Cd(II in the aqueous system has been developed by immobilization of 1-(2-pyridilazo-2-naphtol (PAN in poly vinyl chloride (PVC matrix and nitrophenyl octyl ether (NPOE as a plasticizer. Upon contact with Cd(II in solution, the color of sensor membrane changes from dark yellow to dark red, which is due to the formation of Cd(II–PAN complex. The best sensing results were obtained at pH 8.0 and λmax 558 nm. The dimension of the proposed sensor membrane was 0.8 cm x 2 cm with a thickness of 0.05 mm, the volume of sample was 2 mL with the Cd(II concentration range of  0 – 1.2 ppm. The limit of detection of the method was found to be 0.432 + 0.104 ppm, which was reversible. The proposed methods have been applied in the determination of Cd(II in water samples after addition of internal standard.

Peter Pan på All Inclusive

DEFF Research Database (Denmark)

Schwartz, Camilla

2017-01-01

I løbet af de sidste ti år er det blevet svært og ikke mindst enormt kedeligt at blive voksen i nyere dansk litteratur, og det i en sådan grad, at der måske i samtidslitteraturen er tale om en nærmst epidemisk modstand mod at blive formet og modnet i voksne termer. I artiklen Peter Pan på All...

Handling missing data in cluster randomized trials: A demonstration of multiple imputation with PAN through SAS

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Jiangxiu Zhou

2014-09-01

Full Text Available The purpose of this study is to demonstrate a way of dealing with missing data in clustered randomized trials by doing multiple imputation (MI with the PAN package in R through SAS. The procedure for doing MI with PAN through SAS is demonstrated in detail in order for researchers to be able to use this procedure with their own data. An illustration of the technique with empirical data was also included. In this illustration thePAN results were compared with pairwise deletion and three types of MI: (1 Normal Model (NM-MI ignoring the cluster structure; (2 NM-MI with dummy-coded cluster variables (fixed cluster structure; and (3 a hybrid NM-MI which imputes half the time ignoring the cluster structure, and the other half including the dummy-coded cluster variables. The empirical analysis showed that using PAN and the other strategies produced comparable parameter estimates. However, the dummy-coded MI overestimated the intraclass correlation, whereas MI ignoring the cluster structure and the hybrid MI underestimated the intraclass correlation. When compared with PAN, the p-value and standard error for the treatment effect were higher with dummy-coded MI, and lower with MI ignoring the clusterstructure, the hybrid MI approach, and pairwise deletion. Previous studies have shown that NM-MI is not appropriate for handling missing data in clustered randomized trials. This approach, in addition to the pairwise deletion approach, leads to a biased intraclass correlation and faultystatistical conclusions. Imputation in clustered randomized trials should be performed with PAN. We have demonstrated an easy way for using PAN through SAS.

Managing the impact of gold panning activities within the context of integrated water resources management planning in the Lower Manyame Sub-Catchment, Zambezi Basin, Zimbabwe

Science.gov (United States)

Zwane, Nonhlanhla; Love, David; Hoko, Zvikomborero; Shoko, Dennis

Riverbed alluvial gold panning activities are a cause for degradation of river channels and banks as well as water resources, particularly through accelerated erosion and siltation, in many areas of Zimbabwe. The lower Manyame sub-catchment located in the Northern part of the country is one such area. This study analysed the implications of cross-sectoral coordination of the management of panning and its impacts. This is within the context of conflicts of interests and responsibilities. A situational analysis of different stakeholders from sectors that included mining, environment, water, local government and water users who were located next to identified panning sites, as well as panners was carried out. Selected sites along the Dande River were observed to assess the environmental effects. The study determined that all stakeholder groups perceived siltation and river bank degradation as the most severe effect of panning on water resources, yet there were divergent views with regards to coordination of panning management. The Water Act of 1998 does not give enough power to management institutions including the Lower Manyame Sub-catchment Council to protect water resources from the impacts of panning, despite the fact that the activities affect the water resource base. The Mines and Minerals Act of 1996 remains the most powerful legislation, while mining sector activities adversely affect environmental resources. Furthermore, complexities were caused by differences in the definition of water resources management boundaries as compared to the overall environmental resources management boundaries according to the Environmental Management Act (EMA) of 2000, and by separate yet parallel water and environmental planning processes. Environmental sector institutions according to the EMA are well linked to local government functions and resource management is administrative, enhancing efficient coordination.

Quality of healthcare in Canada: potential for a pan-Canadian measurement standard.

Science.gov (United States)

Florizone, Dan

2012-01-01

Saskatchewan has embarked on a journey to transform the quality of its healthcare. Through our experiences, we have learned many lessons that could be useful to the development of a pan-Canadian system of measurement aimed at bettering care. However, measurement in isolation is insufficient to achieve improved healthcare. The system needs to be linked to a common improvement agenda. Creating a systematic approach to improvement is only possible through developing the capacities of leaders and front-line staff, by alignment through a common purpose, by focusing on value from the perspective of the customer and by creating measures backed by best practice that are transparent and accountable.

CO2-Philic Thin Film Composite Membranes: Synthesis and Characterization of PAN-r-PEGMA Copolymer

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Madhavan Karunakaran

2017-07-01

Full Text Available In this work, we report the successful fabrication of CO2-philic polymer composite membranes using a polyacrylonitrile-r-poly(ethylene glycol methyl ether methacrylate (PAN-r-PEGMA copolymer. The series of PAN-r-PEGMA copolymers with various amounts of PEG content was synthesized by free radical polymerization in presence of AIBN initiator and the obtained copolymers were used for the fabrication of composite membranes. The synthesized copolymers show high molecular weights in the range of 44–56 kDa. We were able to fabricate thin film composite (TFC membranes by dip coating procedure using PAN-r-PEGMA copolymers and the porous PAN support membrane. Scanning electron microscopy (SEM and atomic force microscopy (AFM were applied to analyze the surface morphology of the composite membranes. The microscopy analysis reveals the formation of the defect free skin selective layer of PAN-r-PEGMA copolymer over the porous PAN support membrane. Selective layer thickness of the composite membranes was in the range of 1.32–1.42 μm. The resulting composite membrane has CO2 a permeance of 1.37 × 10−1 m3/m2·h·bar and an ideal CO2/N2, selectivity of 65. The TFC membranes showed increasing ideal gas pair selectivities in the order CO2/N2 > CO2/CH4 > CO2/H2. In addition, the fabricated composite membranes were tested for long-term single gas permeation measurement and these membranes have remarkable stability, proving that they are good candidates for CO2 separation.

CO2-Philic Thin Film Composite Membranes: Synthesis and Characterization of PAN-r-PEGMA Copolymer

KAUST Repository

Karunakaran, Madhavan

2017-07-06

In this work, we report the successful fabrication of CO2-philic polymer composite membranes using a polyacrylonitrile-r-poly(ethylene glycol) methyl ether methacrylate (PAN-r-PEGMA) copolymer. The series of PAN-r-PEGMA copolymers with various amounts of PEG content was synthesized by free radical polymerization in presence of AIBN initiator and the obtained copolymers were used for the fabrication of composite membranes. The synthesized copolymers show high molecular weights in the range of 44-56 kDa. We were able to fabricate thin film composite (TFC) membranes by dip coating procedure using PAN-r-PEGMA copolymers and the porous PAN support membrane. Scanning electron microscopy (SEM) and atomic force microscopy (AFM) were applied to analyze the surface morphology of the composite membranes. The microscopy analysis reveals the formation of the defect free skin selective layer of PAN-r-PEGMA copolymer over the porous PAN support membrane. Selective layer thickness of the composite membranes was in the range of 1.32-1.42 mu m. The resulting composite membrane has CO2 a permeance of 1.37 x 10(-1) m(3)/m(2).h.bar and an ideal CO2/N-2, selectivity of 65. The TFC membranes showed increasing ideal gas pair selectivities in the order CO2/N-2 > CO2/CH4 > CO2/H-2. In addition, the fabricated composite membranes were tested for long-term single gas permeation measurement and these membranes have remarkable stability, proving that they are good candidates for CO2 separation.

Multi-tracer small animal PET imaging of the tumour response to the novel pan-Erb-B inhibitor CI-1033

International Nuclear Information System (INIS)

Dorow, Donna S.; Cullinane, Carleen; Conus, Nelly; Roselt, Peter; Binns, David; McCarthy, Timothy J.; McArthur, Grant A.; Hicks, Rodney J.

2006-01-01

This study was designed as ''proof of concept'' for a drug development model utilising multi-tracer serial small animal PET imaging to characterise tumour responses to molecularly targeted therapy. Mice bearing subcutaneous A431 human squamous carcinoma xenografts (n=6-8) were treated with the pan-Erb-B inhibitor CI-1033 or vehicle and imaged serially (days 0, 3 and 6 or 7) with [ 18 F]fluorodeoxyglucose, [ 18 F]fluoro-L-thymidine, [ 18 F]fluoro-azoazomycinarabinoside or [ 18 F]fluoromisonidazole. Separate cohorts (n=3) were treated identically and tumours were assessed ex vivo for markers of glucose metabolism, proliferation and hypoxia. During the study period, mean uptake of all PET tracers generally increased for control tumours compared to baseline. In contrast, tracer uptake into CI-1033-treated tumours decreased by 20-60% during treatment. Expression of the glucose transporter Glut-1 and cell cycle markers was unchanged or increased in control tumours and generally decreased with CI-1033 treatment, compared to baseline. Thymidine kinase activity was reduced in all tumours compared to baseline at day 3 but was sevenfold higher in control versus CI-1033-treated tumours by day 6 of treatment. Uptake of the hypoxia marker pimonidazole was stable in control tumours but was severely reduced following 7 days of CI-1033 treatment. CI-1033 treatment significantly affects tumour metabolism, proliferation and hypoxia as determined by PET. The PET findings correlated well with ex vivo biomarkers for each of the cellular processes studied. These results confirm the utility of small animal PET for evaluation of the effectiveness of molecularly targeted therapies and simultaneously definition of specific cellular processes involved in the therapeutic response. (orig.)

Characterization of proton conducting blend polymer electrolyte using PVA-PAN doped with NH{sub 4}SCN

Energy Technology Data Exchange (ETDEWEB)

Premalatha, M. [PG & Research Department of Physics, N.M.S.S.Vellaichamy Nadar College, Madurai-625 019 (India); Materials Research Center, Coimbatore-641 045 (India); Mathavan, T., E-mail: tjmathavan@gmail.com, E-mail: kingslin.genova20@gmail.com [PG & Research Department of Physics, N.M.S.S.Vellaichamy Nadar College, Madurai-625 019 (India); Selvasekarapandian, S. [Materials Research Center, Coimbatore-641 045 (India); Genova, F. Kingslin Mary, E-mail: tjmathavan@gmail.com, E-mail: kingslin.genova20@gmail.com; Umamaheswari, R. [Department of physics, S.F.R College for Women, Sivakasi-626 128 (India)

2016-05-23

Polymer electrolytes with proton conductivity based on blend polymer using polyvinyl alcohol (PVA) and poly acrylo nitrile (PAN) doped with ammonium thiocyanate have been prepared by solution casting method using DMF as solvent. The complex formation between the blend polymer and the salt has been confirmed by FTIR Spectroscopy. The amorphous nature of the blend polymer electrolytes have been confirmed by XRD analysis. The highest conductivity at 303 K has been found to be 3.25 × 10{sup −3} S cm{sup −1} for 20 mol % NH{sub 4}SCN doped 92.5PVA:7.5PAN system. The increase in conductivity of the doped blend polymer electrolytes with increasing temperature suggests the Arrhenius type thermally activated process. The activation energy is found to be low (0.066 eV) for the highest conductivity sample.

Maternal Behavior and Physiological Stress Levels in Wild Chimpanzees (Pan troglodytes schweinfurthii).

Science.gov (United States)

Stanton, Margaret A; Heintz, Matthew R; Lonsdorf, Elizabeth V; Santymire, Rachel M; Lipende, Iddi; Murray, Carson M

2015-06-01

Individual differences in maternal behavior toward, and investment in, offspring can have lasting consequences, particularly among primate taxa characterized by prolonged periods of development over which mothers can exert substantial influence. Given the role of the neuroendocrine system in the expression of behavior, researchers are increasingly interested in understanding the hormonal correlates of maternal behavior. Here, we examined the relationship between maternal behavior and physiological stress levels, as quantified by fecal glucocorticoid metabolite (FGM) concentrations, in lactating chimpanzees, Pan troglodytes schweinfurthii , at Gombe National Park, Tanzania. After accounting for temporal variation in FGM concentrations, we found that mothers interacted socially (groomed and played) with and nursed their infants more on days when FGM concentrations were elevated compared to days when FGM concentrations were within the range expected given the time of year. However, the proportion of time mothers and infants spent in contact did not differ based on FGM concentrations. These results generally agree with the suggestion that elevated GC concentrations are related to maternal motivation and responsivity to infant cues and are the first evidence of a hormonal correlate of maternal behavior in a wild great ape.

Localization and regulation of mouse pantothenate kinase 2 [The PanK2 Genes of Mouse and Human Specify Proteins with Distinct Subcellular Locations

Energy Technology Data Exchange (ETDEWEB)

Leonardi, Roberta [St. Jude Children' s Research Hospital, Memphis, TN (United States); Zhang, Yong-Mei [St. Jude Children' s Research Hospital, Memphis, TN (United States); Lykidis, Athanasios [DOE Joint Genome Inst., Walnut Creek, CA (United States); Rock, Charles O. [St. Jude Children' s Research Hospital, Memphis, TN (United States); Jackowski, Suzanne [St. Jude Children' s Research Hospital, Memphis, TN (United States)

2007-09-07

Coenzyme A (CoA) biosynthesis is initiated by pantothenatekinase (PanK) and CoA levels are controlled through differentialexpression and feedback regulation of PanK isoforms. PanK2 is amitochondrial protein in humans, but comparative genomics revealed thatacquisition of a mitochondrial targeting signal was limited to primates.Human and mouse PanK2 possessed similar biochemical properties, withinhibition by acetylCoA and activation by palmitoylcarnitine. Mouse PanK2localized in the cytosol, and the expression of PanK2 was higher in humanbrain compared to mouse brain. Differences in expression and subcellularlocalization should be considered in developing a mouse model for humanPanK2 deficiency.

PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

Directory of Open Access Journals (Sweden)

Huang Hsien-Da

2008-11-01

Full Text Available Abstract Background The elucidation of transcriptional regulation in plant genes is important area of research for plant scientists, following the mapping of various plant genomes, such as A. thaliana, O. sativa and Z. mays. A variety of bioinformatic servers or databases of plant promoters have been established, although most have been focused only on annotating transcription factor binding sites in a single gene and have neglected some important regulatory elements (tandem repeats and CpG/CpNpG islands in promoter regions. Additionally, the combinatorial interaction of transcription factors (TFs is important in regulating the gene group that is associated with the same expression pattern. Therefore, a tool for detecting the co-regulation of transcription factors in a group of gene promoters is required. Results This study develops a database-assisted system, PlantPAN (Plant Promoter Analysis Navigator, for recognizing combinatorial cis-regulatory elements with a distance constraint in sets of plant genes. The system collects the plant transcription factor binding profiles from PLACE, TRANSFAC (public release 7.0, AGRIS, and JASPER databases and allows users to input a group of gene IDs or promoter sequences, enabling the co-occurrence of combinatorial transcription factor binding sites (TFBSs within a defined distance (20 bp to 200 bp to be identified. Furthermore, the new resource enables other regulatory features in a plant promoter, such as CpG/CpNpG islands and tandem repeats, to be displayed. The regulatory elements in the conserved regions of the promoters across homologous genes are detected and presented. Conclusion In addition to providing a user-friendly input/output interface, PlantPAN has numerous advantages in the analysis of a plant promoter. Several case studies have established the effectiveness of PlantPAN. This novel analytical resource is now freely available at http://PlantPAN.mbc.nctu.edu.tw.

Supporting of some ferrocyanides on polyacrylonitrile (PAN) binding polymer and their application for cesium treatment

International Nuclear Information System (INIS)

Someda, H.H.; El Zahhar, A.A.; Shehata, M.K.; El-Naggar, H.A.

2001-01-01

Transition metal ferrocyanides were supported on polyacrylonitrile (PAN) as a binding polymer and were used for removal of radiocesium. The sorption capacity were determined for each sorbent and was found to be 1.22 and 0.65 meq/gm for KZnHCF-PAN and KCuHCF-PAN respectively. Different parameters affecting the sorption process were studied as chemical nature of the active solution, presence of competing ions and flow rate of feed solution. The regeneration of the used sorbent was studied using different solutions and also reusing the regenerated sorbent in other cycle up to four cycles (authors)

Bronchiectasis: a bacteriological profile | Bopaka | Pan African ...

African Journals Online (AJOL)

Pan African Medical Journal. Journal Home · ABOUT · Advanced Search · Current Issue · Archives · Journal Home > Vol 22, No 1 (2015) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Download this PDF file. The PDF file you selected should load here if your ...

Hydrous manganese oxide-polyacrylonitrile (HMO-PAN) composite for the treatment of radioactive laundry wastewater

International Nuclear Information System (INIS)

Sanghwa Oh; Won Sik Shin; Sang-June Choi

2015-01-01

Hydrous manganese oxide-polyacrylonitrile (HMO-PAN) composite was applied for the removal of Co 2+ , Sr 2+ and Cs + from radioactive laundry wastewater. Single- and multi-solute competitive sorptions onto HMO-PAN were investigated. The maximum sorption capacity was in the order of Co 2+ (0.573) > Cs + (0.551) > Sr 2+ (0.310 mmol g -1 ). Sorption of the metals occurred via physical adsorption due to weak van der Waals force and ion exchange with Mn 2+ in HMO-PAN. Sorption behaviors were not related to the types of the surfactants. Among the tested surfactants, SDBS and SOBS remarkably increased the distribution coefficient of Co 2+ and Sr 2+ , respectively. (author)

Structural stability of PAN fiber under high electron beam radiation doses

International Nuclear Information System (INIS)

Pino, Eddy S.; Machado, Luci D.B.; Arruda, Clarissa P. Zelinschi de; Carvalho, Alvaro A. Silva de; Giovedi, Claudia

2009-01-01

Fiber-reinforced composite are an important class of engineering material. A relevant task of composite technology in order to produce materials for structures of high mechanical performance is to obtain the best carbon fiber. One of the main ways to produce carbon fibers of high Young's modulus and tensile strength is to use as starting material polyacrylonitrile (PAN) fibers which after a rigorous and carefully thermal process become carbon fibers. Since some chemical modifications produced in the thermal treatment can be induced by ionizing radiation, the aim of this paper is to evaluate the effect of high electron beam (EB) doses on a commercial PAN fiber in order to evaluate the use of this technology as an alternative treatment to improve the properties and characteristics of the produced carbon fiber. The doses applied were: 0.2, 0.4, 0.6, 0.8, 1.0 and 1.2 MGy. The irradiation effects induced on the PAN fiber were evaluated by Fourier transform infrared spectroscopy (FTIR), differential scanning calorimetry (DSC) and thermogravimetry (TG). FTIR obtained data have shown that the main functional groups remain practically unchanged in the non-irradiated and irradiated samples. The single DSC exothermic peak obtained for non-irradiated sample, becomes a double peak after the irradiation, presenting lower initial and higher final temperatures for exothermic DSC curves. The enthalpy involved in the chemical reaction decreases for irradiated samples as compared with the non-irradiated PAN fiber. TG data have shown that irradiated samples start a decomposition process at lower temperatures compared to the non-irradiated sample. (author)

Grenvillian vs Pan-African tectonic evolution in the Gamburtsev Province of East Antarctica

Science.gov (United States)

Ferraccioli, F.; Guochao, W.; Finn, C.; Bell, R. E.

2017-12-01

The Gamburtsev Subglacial Mountains in interior East Antarctica are underlain by 50-60 km thick crust. In contrast, the Archean to Mesoproterozoic Mawson craton that occupies the Wilkes and Terre Adelie region features only 40-45 km thick crust. The Gamburtsev Province is underlain by 200 km thick lithoshere, as typically observed over Precambrian lithosphere that has not been substantially reworked during Phanerozoic subduction or collision. Ferraccioli et al., (2011) proposed that a segment of a stalled orogen (i.e. an orogen where widespread orogenic collapse and root delamination has not occurred) is preserved in the Gamburtsev Province and hypothesised that its origin relates to accretionary and subsequent collisional events at ca 1 Ga, linked to the assembly of Rodinia. However, passive seismic interpretations indicate that crustal thickening may relate instead to Pan-African age assembly of Gondwana (at ca 550 Ma). Here we interpret a set of enhanced magnetic and gravity images, depth to magnetic and gravity sources and 2D and forward and inverse models to characterise the crustal architecture of the Gamburtsev Province. Enhanced aeromagnetic images reveal a system of subglacial faults that segment the Gamburtsev Province into three distinct geophysical domains, the northern, central and southern domains. Apparent offsets in high-frequency magnetic anomalies within the central domain are interpreted as revealing a transpressional fault system parallel to the previously proposed Gamburtsev Suture. Our magnetic and gravity model, combined with independent constraints from sediment provenance ages, is interpreted as revealing arc and back arc terranes of inferred Grenvillian age in the northern and Central domains of the Gambrurtsev Province. Distinct magnetic anomalies correspond to inferred Paleoproterozoic crust that may have affinities with the Lambert Terrane and the South Pole Province, an inferred Mesoproterozoic (1.6-1.4 Ga?) igneous province. We

Climate Prediction Center (CPC) U.S. Pan Evaporation Observations

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Observational reports of daily pan evaporation (1200 UTC to 1200 UTC) are made by members of the NWS Cooperative Network (COOP) or supplemental networks of NOAA's...

Pan-London tuberculosis services: a service evaluation

Directory of Open Access Journals (Sweden)

Belling Ruth

2012-07-01

Full Text Available Abstract Background London has the largest proportion of tuberculosis (TB cases of any western European capital, with almost half of new cases drug-resistant. Prevalence varies considerably between and within boroughs with research suggesting inadequate control of TB transmission in London. Economic pressures may exacerbate the already considerable challenges for service organisation and delivery within this context. This paper presents selected findings from an evaluation of London’s TB services’ organisation, delivery, professional workforce and skill mix, intended to support development of a strategic framework for a pan-London TB service. These may also interest health service professionals and managers in TB services in the UK, other European cities and countries and in services currently delivered by multiple providers operating independently. Methods Objectives were: 1 To establish how London’s TB services are structured and delivered in relation to leadership, management, organisation and delivery, coordination, staffing and support; 2 To identify tools/models for calculating skill mix as a basis for identifying skill mix requirements in delivering TB services across London; 3 To inform a strategic framework for the delivery of a pan-London TB service, which may be applicable to other European cities. The multi-method service audit evaluation comprised documentary analysis, semi-structured interviews with TB service users (n = 10, lead TB health professionals and managers (n = 13 representing London’s five sectors and focus groups with TB nurses (n = 8 and non-London network professionals (n = 2. Results Findings showed TB services to be mainly hospital-based, with fewer community-based services. Documentary analysis and professionals’ interviews suggested difficulties with early access to services, low suspicion index amongst some GPs and restricted referral routes. Interviews indicated lack of managed

Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts.

Science.gov (United States)

De Maayer, Pieter; Chan, Wai Yin; Rubagotti, Enrico; Venter, Stephanus N; Toth, Ian K; Birch, Paul R J; Coutinho, Teresa A

2014-05-27

Pantoea ananatis is found in a wide range of natural environments, including water, soil, as part of the epi- and endophytic flora of various plant hosts, and in the insect gut. Some strains have proven effective as biological control agents and plant-growth promoters, while other strains have been implicated in diseases of a broad range of plant hosts and humans. By analysing the pan-genome of eight sequenced P. ananatis strains isolated from different sources we identified factors potentially underlying its ability to colonize and interact with hosts in both the plant and animal Kingdoms. The pan-genome of the eight compared P. ananatis strains consisted of a core genome comprised of 3,876 protein coding sequences (CDSs) and a sizeable accessory genome consisting of 1,690 CDSs. We estimate that ~106 unique CDSs would be added to the pan-genome with each additional P. ananatis genome sequenced in the future. The accessory fraction is derived mainly from integrated prophages and codes mostly for proteins of unknown function. Comparison of the translated CDSs on the P. ananatis pan-genome with the proteins encoded on all sequenced bacterial genomes currently available revealed that P. ananatis carries a number of CDSs with orthologs restricted to bacteria associated with distinct hosts, namely plant-, animal- and insect-associated bacteria. These CDSs encode proteins with putative roles in transport and metabolism of carbohydrate and amino acid substrates, adherence to host tissues, protection against plant and animal defense mechanisms and the biosynthesis of potential pathogenicity determinants including insecticidal peptides, phytotoxins and type VI secretion system effectors. P. ananatis has an 'open' pan-genome typical of bacterial species that colonize several different environments. The pan-genome incorporates a large number of genes encoding proteins that may enable P. ananatis to colonize, persist in and potentially cause disease symptoms in a wide range of

GigaPan Technology to Enhance In-Class and In-Field Learning in Community College Settings

Science.gov (United States)

Villalobos, J. I.; Bentley, C.

2014-12-01

Community college students account for over 40% of all undergraduates in the United States as well as the majority of minority and non-traditional students attending undergraduate courses. Implementing innovative, cost effective, and formative pedagogies to the diverse backgrounds of students that typically enroll at a community is often a challenge. Interactive pedagogies in geology pose a unique challenge considering that students gain the most long-term knowledge when topics covered in a course are exposed to them in outdoor settings where they are allowed to explore and make connections. The ability to expose students to real world examples is challenging to many community college faculty considering that that many; lack funds or means for transportation of students, do not have administrative support on such endeavors, teach evening or night classes, or have a high percentage of students who are physically limited or have obligations to work and family. A joint collaborative between El Paso Community College (EPCC) and Northern Virginia Community College (NOVA) has explored the usage of GigaPan technology to create multi-layered online material to minimize these issues faced by many community college faculty and students. The primary layer of the online material is GigaPans of local geological sites that highlight large-scale structures in the El Paso, Texas region that are commonly used in local field trips and lab book material. The second layer is of Macro-GigaPans of hand samples of key outcrops from the primarily GigaPans which facilitate student learning, exploration, and ability to make connections by exploring smaller scale features of the primary layer. A third layer of online material, GigaPans of thin sections of hand samples (from secondary layers), and curriculum based on the GigaPans was then created to assist students in evaluating proposed hypotheses on the primary layers' geological origin. GigaPan cirriculum was utilized in introductory

Failure of pan-retinal laser photocoagulation to regress ...

African Journals Online (AJOL)

Objectives: (i) To illustrate the occurrence of failure of regression of neovascularization (NV) following adequate initial and supplemental pan-retinal laser photo- coagulation (PRP) using 3 case histories (ii) To review the literature on possible aetiogenesis and further management options. Methods: The hospital records of 3 ...

Mixing studies at low grade vacuum pan using the radiotracer method

International Nuclear Information System (INIS)

Griffith, J.M

1999-01-01

In this paper, some preliminary results achieved in the evaluation of the homogenization time at a vacuum pan for massecuite b and seed preparation , using two approaches of the radiotracer method, are presented. Practically no difference between the o n line , using small size detector and the sampling methods, in mixing studies performed at the high-grade massecuite was detected. Results achieved during the trials performed at the vacuum station show that the mechanical agitation in comparison with normal agitation improves the performance of mixing in high-grade massecuite b and in seed preparation at the vacuum pan

Mixing studies at low grade vacuum pan using the radiotracer method

International Nuclear Information System (INIS)

Griffith, J.M

1999-01-01

In this paper, some preliminary results achieved in the evaluation of the homogenization time at a Vacuum Pan for massecuite B and seed preparation , using two approaches of the radiotracer method, are presented. Practically no difference between the Ion Line , using small size detector and the sampling methods, in mixing studies performed at the high-grade massecuite was detected. Results achieved during the trials performed at the vacuum station show that the mechanical agitation in comparison with normal agitation improves the performance of mixing in high-grade massecuite b and in seed preparation at the vacuum pan

Charge Diffusion Variations in Pan-STARRS1 CCDs

Science.gov (United States)

Magnier, Eugene A.; Tonry, J. L.; Finkbeiner, D.; Schlafly, E.; Burgett, W. S.; Chambers, K. C.; Flewelling, H. A.; Hodapp, K. W.; Kaiser, N.; Kudritzki, R.-P.; Metcalfe, N.; Wainscoat, R. J.; Waters, C. Z.

2018-06-01

Thick back-illuminated deep-depletion CCDs have superior quantum efficiency over previous generations of thinned and traditional thick CCDs. As a result, they are being used for wide-field imaging cameras in several major projects. We use observations from the Pan-STARRS 3π survey to characterize the behavior of the deep-depletion devices used in the Pan-STARRS 1 Gigapixel Camera. We have identified systematic spatial variations in the photometric measurements and stellar profiles that are similar in pattern to the so-called “tree rings” identified in devices used by other wide-field cameras (e.g., DECam and Hypersuprime Camera). The tree-ring features identified in these other cameras result from lateral electric fields that displace the electrons as they are transported in the silicon to the pixel location. In contrast, we show that the photometric and morphological modifications observed in the GPC1 detectors are caused by variations in the vertical charge transportation rate and resulting charge diffusion variations.

Isolation of hydrolase producing bacteria from Sua pan solar ...

African Journals Online (AJOL)

STORAGESEVER

2009-10-19

Oct 19, 2009 ... sp. Sua-BAC020 were studied further. Isolate Sua-BAC005 affiliated with Bacillus amyloliquefaciens secreted ... halotolerant eubacteria from Sua pan evaporator ponds in ... PCR fragments were ligated into pGEM-T Easy.

A pan-tropical cascade of fire driven by El Niño/Southern Oscillation

Science.gov (United States)

Chen, Yang; Morton, Douglas C.; Andela, Niels; van der Werf, Guido R.; Giglio, Louis; Randerson, James T.

2017-12-01

The El Niño/Southern Oscillation (ENSO) has a pronounced influence on year-to-year variations in climate1. The response of fires to this forcing2 is complex and has not been evaluated systematically across different continents. Here we use satellite data to create a climatology of burned-area and fire-emissions responses, drawing on six El Niño and six La Niña events during 1997-2016. On average, reductions in precipitation and terrestrial water storage increased fire emissions in pan-tropical forests by 133% during and following El Niño as compared with La Niña. Fires peaked in equatorial Asia early in the ENSO cycle when El Niño was strengthening (Aug-Oct), before moving to southeast Asia and northern South America (Jan-Apr), Central America (Mar-May) and the southern Amazon (Jul-Oct) during the following year. Large decreases in fire occurred across northern Australia during Sep-Oct of the second year from a reduced fuel availability. Satellite observations of aerosols and carbon monoxide provided independent confirmation of the spatiotemporal evolution of fire anomalies. The predictable cascade of fire across different tropical continents described here highlights an important time delay in the Earth system's response to precipitation redistribution. These observations help to explain why the growth rate of atmospheric CO2 increases during El Niño3 and may contribute to improved seasonal fire forecasts.

Pan-Tropical Analysis of Climate Effects on Seasonal Tree Growth

Science.gov (United States)

Wagner, Fabien; Rossi, Vivien; Aubry-Kientz, Mélaine; Bonal, Damien; Dalitz, Helmut; Gliniars, Robert; Stahl, Clément; Trabucco, Antonio; Hérault, Bruno

2014-01-01

Climate models predict a range of changes in tropical forest regions, including increased average temperatures, decreased total precipitation, reduced soil moisture and alterations in seasonal climate variations. These changes are directly related to the increase in anthropogenic greenhouse gas concentrations, primarily CO2. Assessing seasonal forest growth responses to climate is of utmost importance because woody tissues, produced by photosynthesis from atmospheric CO2, water and light, constitute the main component of carbon sequestration in the forest ecosystem. In this paper, we combine intra-annual tree growth measurements from published tree growth data and the corresponding monthly climate data for 25 pan-tropical forest sites. This meta-analysis is designed to find the shared climate drivers of tree growth and their relative importance across pan-tropical forests in order to improve carbon uptake models in a global change context. Tree growth reveals significant intra-annual seasonality at seasonally dry sites or in wet tropical forests. Of the overall variation in tree growth, 28.7% was explained by the site effect, i.e. the tree growth average per site. The best predictive model included four climate variables: precipitation, solar radiation (estimated with extrasolar radiation reaching the atmosphere), temperature amplitude and relative soil water content. This model explained more than 50% of the tree growth variations across tropical forests. Precipitation and solar radiation are the main seasonal drivers of tree growth, causing 19.8% and 16.3% of the tree growth variations. Both have a significant positive association with tree growth. These findings suggest that forest productivity due to tropical tree growth will be reduced in the future if climate extremes, such as droughts, become more frequent. PMID:24670981

An aircraft-borne chemical ionization – ion trap mass spectrometer (CI-ITMS for fast PAN and PPN measurements

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H. Schlager

2011-02-01

Full Text Available An airborne chemical ionization ion trap mass spectrometer instrument (CI-ITMS has been developed for tropospheric and stratospheric fast in-situ measurements of PAN (peroxyacetyl nitrate and PPN (peroxypropionyl nitrate. The first scientific deployment of the FASTPEX instrument (FASTPEX = Fast Measurement of Peroxyacyl nitrates took place in the Arctic during 18 missions aboard the DLR research aircraft Falcon, within the framework of the POLARCAT-GRACE campaign in the summer of 2008. The FASTPEX instrument is described and characteristic properties of the employed ion trap mass spectrometer are discussed. Atmospheric data obtained at altitudes of up to ~12 km are presented, from the boundary layer to the lowermost stratosphere. Data were sampled with a time resolution of 2 s and a 2σ detection limit of 25 pmol mol−1. An isotopically labelled standard was used for a permanent on-line calibration. For this reason the accuracy of the PAN measurements is better than ±10% for mixing ratios greater than 200 pmol mol−1. PAN mixing ratios in the summer Arctic troposphere were in the order of a few hundred pmol mol−1 and generally correlated well with CO. In the Arctic boundary layer and lowermost stratosphere smaller PAN mixing ratios were observed due to a combination of missing local sources of PAN precursor gases and efficient removal processes (thermolysis/photolysis. PPN, the second most abundant PAN homologue, was measured simultaneously. Observed PPN/PAN ratios range between ~0.03 and 0.3.

Rapid response systems.

Science.gov (United States)

Lyons, Patrick G; Edelson, Dana P; Churpek, Matthew M

2018-07-01

Rapid response systems are commonly employed by hospitals to identify and respond to deteriorating patients outside of the intensive care unit. Controversy exists about the benefits of rapid response systems. We aimed to review the current state of the rapid response literature, including evolving aspects of afferent (risk detection) and efferent (intervention) arms, outcome measurement, process improvement, and implementation. Articles written in English and published in PubMed. Rapid response systems are heterogeneous, with important differences among afferent and efferent arms. Clinically meaningful outcomes may include unexpected mortality, in-hospital cardiac arrest, length of stay, cost, and processes of care at end of life. Both positive and negative interventional studies have been published, although the two largest randomized trials involving rapid response systems - the Medical Early Response and Intervention Trial (MERIT) and the Effect of a Pediatric Early Warning System on All-Cause Mortality in Hospitalized Pediatric Patients (EPOCH) trial - did not find a mortality benefit with these systems, albeit with important limitations. Advances in monitoring technologies, risk assessment strategies, and behavioral ergonomics may offer opportunities for improvement. Rapid responses may improve some meaningful outcomes, although these findings remain controversial. These systems may also improve care for patients at the end of life. Rapid response systems are expected to continue evolving with novel developments in monitoring technologies, risk prediction informatics, and work in human factors. Copyright © 2018 Elsevier B.V. All rights reserved.

Pan African Medical Journal - Vol 16, No 1 (2014)

African Journals Online (AJOL)

Pan African Medical Journal - Vol 16, No 1 (2014) .... Cancer incidence in Morocco: report from Casablanca registry 2005-2007 · EMAIL FREE FULL .... Maladie de Leo-Buerger faisant suite à une intoxication au cannabis · EMAIL FREE FULL ...

Scaffold-based pan-agonist design for the PPARα, PPARβ and PPARγ receptors.

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Li-Song Zhang

Full Text Available As important members of nuclear receptor superfamily, Peroxisome proliferator-activated receptors (PPAR play essential roles in regulating cellular differentiation, development, metabolism, and tumorigenesis of higher organisms. The PPAR receptors have 3 identified subtypes: PPARα, PPARβ and PPARγ, all of which have been treated as attractive targets for developing drugs to treat type 2 diabetes. Due to the undesirable side-effects, many PPAR agonists including PPARα/γ and PPARβ/γ dual agonists are stopped by US FDA in the clinical trials. An alternative strategy is to design novel pan-agonist that can simultaneously activate PPARα, PPARβ and PPARγ. Under such an idea, in the current study we adopted the core hopping algorithm and glide docking procedure to generate 7 novel compounds based on a typical PPAR pan-agonist LY465608. It was observed by the docking procedures and molecular dynamics simulations that the compounds generated by the core hopping and glide docking not only possessed the similar functions as the original LY465608 compound to activate PPARα, PPARβ and PPARγ receptors, but also had more favorable conformation for binding to the PPAR receptors. The additional absorption, distribution, metabolism and excretion (ADME predictions showed that the 7 compounds (especially Cpd#1 hold high potential to be novel lead compounds for the PPAR pan-agonist. Our findings can provide a new strategy or useful insights for designing the effective pan-agonists against the type 2 diabetes.

The role of surface energy fluxes in pan-Arctic snow cover changes

International Nuclear Information System (INIS)

Shi Xiaogang; Lettenmaier, Dennis P; Groisman, Pavel Ya; Dery, Stephen J

2011-01-01

We analyze snow cover extent (SCE) trends in the National Oceanic and Atmospheric Administration's (NOAA) northern hemisphere weekly satellite SCE data using the Mann-Kendall trend test and find that North American and Eurasian snow cover in the pan-Arctic have declined significantly in spring and summer over the period of satellite record beginning in the early 1970s. These trends are reproduced, both in trend direction and statistical significance, in reconstructions using the variable infiltration capacity (VIC) hydrological model. We find that spring and summer surface radiative and turbulent fluxes generated in VIC have strong correlations with satellite observations of SCE. We identify the role of surface energy fluxes and determine which is most responsible for the observed spring and summer SCE recession. We find that positive trends in surface net radiation (SNR) accompany most of the SCE trends, whereas modeled latent heat (LH) and sensible heat (SH) trends associated with warming on SCE mostly cancel each other, except for North America in spring, and to a lesser extent for Eurasia in summer. In spring over North America and summer in Eurasia, the SH contribution to the observed snow cover trends is substantial. The results indicate that ΔSNR is the primary energy source and ΔSH plays a secondary role in changes of SCE. Compared with ΔSNR and ΔSH, ΔLH has a minor influence on pan-Arctic snow cover changes.

Participant selection for lung cancer screening by risk modelling (the Pan-Canadian Early Detection of Lung Cancer [PanCan] study): a single-arm, prospective study.

Science.gov (United States)

Tammemagi, Martin C; Schmidt, Heidi; Martel, Simon; McWilliams, Annette; Goffin, John R; Johnston, Michael R; Nicholas, Garth; Tremblay, Alain; Bhatia, Rick; Liu, Geoffrey; Soghrati, Kam; Yasufuku, Kazuhiro; Hwang, David M; Laberge, Francis; Gingras, Michel; Pasian, Sergio; Couture, Christian; Mayo, John R; Nasute Fauerbach, Paola V; Atkar-Khattra, Sukhinder; Peacock, Stuart J; Cressman, Sonya; Ionescu, Diana; English, John C; Finley, Richard J; Yee, John; Puksa, Serge; Stewart, Lori; Tsai, Scott; Haider, Ehsan; Boylan, Colm; Cutz, Jean-Claude; Manos, Daria; Xu, Zhaolin; Goss, Glenwood D; Seely, Jean M; Amjadi, Kayvan; Sekhon, Harmanjatinder S; Burrowes, Paul; MacEachern, Paul; Urbanski, Stefan; Sin, Don D; Tan, Wan C; Leighl, Natasha B; Shepherd, Frances A; Evans, William K; Tsao, Ming-Sound; Lam, Stephen

2017-11-01

Results from retrospective studies indicate that selecting individuals for low-dose CT lung cancer screening on the basis of a highly predictive risk model is superior to using criteria similar to those used in the National Lung Screening Trial (NLST; age, pack-year, and smoking quit-time). We designed the Pan-Canadian Early Detection of Lung Cancer (PanCan) study to assess the efficacy of a risk prediction model to select candidates for lung cancer screening, with the aim of determining whether this approach could better detect patients with early, potentially curable, lung cancer. We did this single-arm, prospective study in eight centres across Canada. We recruited participants aged 50-75 years, who had smoked at some point in their life (ever-smokers), and who did not have a self-reported history of lung cancer. Participants had at least a 2% 6-year risk of lung cancer as estimated by the PanCan model, a precursor to the validated PLCOm2012 model. Risk variables in the model were age, smoking duration, pack-years, family history of lung cancer, education level, body-mass index, chest x-ray in the past 3 years, and history of chronic obstructive pulmonary disease. Individuals were screened with low-dose CT at baseline (T0), and at 1 (T1) and 4 (T4) years post-baseline. The primary outcome of the study was incidence of lung cancer. This study is registered with ClinicalTrials.gov, number NCT00751660. 7059 queries came into the study coordinating centre and were screened for PanCan risk. 15 were duplicates, so 7044 participants were considered for enrolment. Between Sept 24, 2008, and Dec 17, 2010, we recruited and enrolled 2537 eligible ever-smokers. After a median follow-up of 5·5 years (IQR 3·2-6·1), 172 lung cancers were diagnosed in 164 individuals (cumulative incidence 0·065 [95% CI 0·055-0·075], incidence rate 138·1 per 10 000 person-years [117·8-160·9]). There were ten interval lung cancers (6% of lung cancers and 6% of individuals with cancer

Influence of thermal treatment on porosity formation on carbon fiber from textile PAN

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Jossano Saldanha Marcuzzo

2012-01-01

Full Text Available Activated carbon fibers (ACFs are known as an excellent adsorbent material due to their particular characteristics such as their high speed adsorption rate and for being easy to handle. The ACFs are commercially manufactured from carbon fibers (CF which receive an additional activation process and can be produced from celluloses, phenolic resin, pitch and Polyacrylonitrile (PAN. In the present work, the oxidized 5.0 dtex textile PAN fiber was carbonized to CFs formation. During the carbonization process in different heating rates, the topographic features changes on fibers were monitored in order to determine the best carbonization condition for CFs production to be used as raw material for ACF. Different heating rates and maximum temperature of treatment were tested and the results indicated that it is possible to produce poorly activated carbon fiber, directly from oxidized textile PAN fiber, by one single step production process.

Influence of thermal treatment on porosity formation on carbon fiber from textile PAN

Directory of Open Access Journals (Sweden)

Jossano Saldanha Marcuzzo

2013-02-01

Full Text Available Activated carbon fibers (ACFs are known as an excellent adsorbent material due to their particular characteristics such as their high speed adsorption rate and for being easy to handle. The ACFs are commercially manufactured from carbon fibers (CF which receive an additional activation process and can be produced from celluloses, phenolic resin, pitch and Polyacrylonitrile (PAN. In the present work, the oxidized 5.0 dtex textile PAN fiber was carbonized to CFs formation. During the carbonization process in different heating rates, the topographic features changes on fibers were monitored in order to determine the best carbonization condition for CFs production to be used as raw material for ACF. Different heating rates and maximum temperature of treatment were tested and the results indicated that it is possible to produce poorly activated carbon fiber, directly from oxidized textile PAN fiber, by one single step production process.

Culture Prefigures Cognition in Pan/Homo Bonobos

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Sue SAVAGE-RUMBAUGH

2010-01-01

Full Text Available This article questions traditional approaches to the study of primate cognition. Because of a widespread assumption that cognition in non-human primates is genetically encoded, these approaches neglect how profoundly apes’ cultural rearing experiences affect test results. We describe how three advanced cognitive abilities – imitation, theory of mind and language – emerged in bonobos maturing in a Pan/Homo culture.

The Pan-STARRS Survey for Transients (PSST)

Science.gov (United States)

Huber, Mark; Carter Chambers, Kenneth; Flewelling, Heather; Smartt, Stephen J.; Smith, Ken; Wright, Darryl

2015-08-01

The Pan-STARRS1 (PS1) Science Consortium finished the 3Pi survey of the whole sky north of -30 degrees between 2010-2014 in grizy (PS1 specific filters) and the PS1 telescope has been running a wide-field survey for near earth objects, funded by NASA through the NEO Observation Program. This survey takes data in a w-band (wide-band filter spanning g,r,i) in dark time, and combinations of r, i, z and y during bright time. We are now processing these data through the Pan-STARRS IPP difference imaging pipeline and recovering stationary transients. Effectively the 3Pi survey for transients that started during the PS1 Science Consortium is being continued under the new NEO optimized operations mode. The observing procedure in this case is to take a quad of exposures, typically 30-45 seconds separated by 10-20 minutes each, typically revealing high confidence transients (greater than 5-sigma) to depths of i~ 20.7, y~18.3 (AB mags). This cadence may be repeated on subsequent nights in a return pointing.Continuing the public release of the first 880 transients from the PS1 3Pi survey during the search period September 2013 - January 2014, beginning February 2015, the transient events using the data from the the Pan-STARRS NEO Science Consortium are now regularly added. These are mostly supernova candidates, but the list also contains some variable stars, AGN, and nuclear transients. The light curves are too sparsely sampled to be of standalone use, but they may be of use to the community in combining with existing data (e.g. Fraser et al. 2013, ApJ, 779, L8), constraining explosion and rise times (e.g. Nicholl et al. 2013, Nature, 502, 346) as well as many being new discoveries.For additional details visit http://star.pst.qub.ac.uk/ps1threepi/

O6-Methylguanine DNA Methyltransferase Status Does Not Predict Response or Resistance to Alkylating Agents in Well-Differentiated Pancreatic Neuroendocrine Tumors.

Science.gov (United States)

Raj, Nitya; Klimstra, David S; Horvat, Natally; Zhang, Liying; Chou, Joanne F; Capanu, Marinela; Basturk, Olca; Do, Richard Kinh Gian; Allen, Peter J; Reidy-Lagunes, Diane

2017-07-01

Alkylating agents have activity in well-differentiated pancreatic neuroendocrine tumors (WD panNETs). In glioblastoma multiforme, decreased activity of O-methylguanine DNA methyltransferase (MGMT) predicts response; in panNETs, MGMT relevance is unknown. We identified patients with WD panNETs treated with alkylating agents, determined best overall response by Response Evaluation Criteria In Solid Tumors (RECIST) 1.1, and performed MGMT activity testing. Fifty-six patients were identified; 26 (46%) of the 56 patients experienced partial response, 24 (43%) of 56 experienced stable disease, and 6 (11%) of 56 experienced progression of disease. O-methylguanine DNA methyltransferase status was available for 36 tumors. For tumors with partial response, 10 (67%) of 15 were MGMT deficient, and 5 (33%) of 15 were MGMT intact. For tumors with stable disease, 7 (47%) of 15 were MGMT deficient, and 8 (53%) of 15 were MGMT intact. For tumors with progression of disease, 3 (50%) of 6 were MGMT deficient, and 3 (50%) of 6 were MGMT intact. We observed response and resistance to alkylating agents in MGMT-deficient and MGMT-intact tumors. O-methylguanine DNA methyltransferase status should not guide alkylating agent therapy in WD panNETs.

Natural IgM and TLR Agonists Switch Murine Splenic Pan-B to “Regulatory” Cells That Suppress Ischemia-Induced Innate Inflammation via Regulating NKT-1 Cells

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Peter I. Lobo

2017-08-01

Full Text Available Natural IgM anti-leukocyte autoantibodies (IgM-ALAs inhibit inflammation by several mechanisms. Here, we show that pan-B cells and bone marrow-derived dendritic cells (BMDCs are switched to regulatory cells when pretreated ex vivo with IgM. B cells are also switched to regulatory cells when pretreated ex vivo with CpG but not with LPS. Pre-emptive infusion of such ex vivo induced regulatory cells protects C57BL/6 mice from ischemia-induced acute kidney injury (AKI via regulation of in vivo NKT-1 cells, which normally amplify the innate inflammatory response to DAMPS released after reperfusion of the ischemic kidney. Such ex vivo induced regulatory pan-B cells and BMDC express low CD1d and inhibit inflammation by regulating in vivo NKT-1 in the context of low-lipid antigen presentation and by a mechanism that requires costimulatory molecules, CD1d, PDL1/PD1, and IL10. Second, LPS and CpG have opposite effects on induction of regulatory activity in BMDC and B cells. LPS enhances regulatory activity of IgM-pretreated BMDC but negates the IgM-induced regulatory activity in B cells, while CpG, with or without IgM pretreatment, induces regulatory activity in B cells but not in BMDC. Differences in the response of pan-B and dendritic cells to LPS and CpG, especially in the presence of IgM-ALA, may have relevance during infections and inflammatory disorders where there is an increased IgM-ALA and release of TLRs 4 and 9 ligands. Ex vivo induced regulatory pan-B cells could have therapeutic relevance as these easily available cells can be pre-emptively infused to prevent AKI that can occur during open heart surgery or in transplant recipients receiving deceased donor organs.

Cholera Epidemiology in Nigeria: an overview | Adagbada | Pan ...

African Journals Online (AJOL)

Pan African Medical Journal. Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives · Journal Home > Vol 12, No 1 (2012) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Download this PDF file. The PDF file you selected should ...

Can Chimpanzees ("Pan troglodytes") Discriminate Appearance from Reality?

Science.gov (United States)

Krachun, Carla; Call, Josep; Tomasello, Michael

2009-01-01

A milestone in human development is coming to recognize that how something looks is not necessarily how it is. We tested appearance-reality understanding in chimpanzees ("Pan troglodytes") with a task requiring them to choose between a small grape and a big grape. The apparent relative size of the grapes was reversed using magnifying and…

Detectability of Chelyabinsk-like impactors with Pan-STARRS

Science.gov (United States)

Micheli, Marco; Wainscoat, Richard J.; Denneau, Larry

2018-03-01

In this work we present the results of our analysis of the detectability of an object in the size range of the recent Chelyabinsk impactor under the current discovery and follow-up capabilities, using the specific observational strategy of the Pan-STARRS survey as a reference point. We first discuss the observability of real-life cases inspired by the impact trajectories of 2008 TC3, 2014 AA, the past Earth encounters with 2014 RC and 2015 TB145, the upcoming fly-by of 2012 TC4 and the Chelyabinsk event. We then expand our analysis with the investigation of synthetic impactors with realistic orbital distributions. Among the various conclusions of our analysis, we discuss how the time of first detectability of an object does not necessarily correspond to the moment when that same object can be recognized as an impactor. We also point out how objects discovered only a few days before impact can be immediately identified as impactors, partly thanks to the good astrometric quality that telescopes like Pan-STARRS currently achieve.

Xe/Kr Selectivity Measurements using AgZ-PAN at Various Temperatures

International Nuclear Information System (INIS)

Garn, Troy Gerry; Greenhalgh, Mitchell Randy; Watson, Tony Leroy

2015-01-01

In preparation for planned FY-15 Xe/Kr multi-column testing, a series of experiments were performed to determine the selectivity of Xe over Kr using the silver converted mordenite-polyacrylonitrile (AgZ-PAN) sorbent. Results from these experiments will be used for parameter selection guidelines to define test conditions for Kr gas capture purity evaluations later this year. The currently configured experimental test bed was modified by installing a new cooling apparatus to permit future multi-column testing with independent column temperature control. The modified test bed will allow for multi-column testing to facilitate a Xe separation followed by a Kr separation using engineered form sorbents. Selectivity experiments were run at temperatures of 295, 250 and 220 K. Two feed gas compositions of 1000 ppmv Xe, 150 ppmv Kr in either a He or an air balance were used. AgZ-PAN sorbent selectivity was calculated using Xe and Kr capacity determinations. AgZ-PAN sorbent selectivities for Xe over Kr of 72 were calculated at room temperature (295 K) using the feed gas with a He balance and 34 using the feed gas with an air balance. As the test temperatures were decreased the selectivity of Xe over Kr also decreased due to an increase in both Xe and Kr capacities. At 220 K, the sorbent selectivities for Xe over Kr were 22 using the feed gas with a He balance and 28 using the feed gas with an air balance. The selectivity results indicate that AgZ-PAN used in the first column of a multi-column configuration will provide adequate partitioning of Xe from Kr in the tested temperature range to produce a more pure Kr end product for collection.

PAN-SHARPENING APPROACHES BASED ON UNMIXING OF MULTISPECTRAL REMOTE SENSING IMAGERY

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G. Palubinskas

2016-06-01

Full Text Available Model based analysis or explicit definition/listing of all models/assumptions used in the derivation of a pan-sharpening method allows us to understand the rationale or properties of existing methods and shows a way for a proper usage or proposal/selection of new methods ‘better’ satisfying the needs of a particular application. Most existing pan-sharpening methods are based mainly on the two models/assumptions: spectral consistency for high resolution multispectral data (physical relationship between multispectral and panchromatic data in a high resolution scale and spatial consistency for multispectral data (so-called Wald’s protocol first property or relationship between multispectral data in different resolution scales. Two methods, one based on a linear unmixing model and another one based on spatial unmixing, are described/proposed/modified which respect models assumed and thus can produce correct or physically justified fusion results. Earlier mentioned property ‘better’ should be measurable quantitatively, e.g. by means of so-called quality measures. The difficulty of a quality assessment task in multi-resolution image fusion or pan-sharpening is that a reference image is missing. Existing measures or so-called protocols are still not satisfactory because quite often the rationale or assumptions used are not valid or not fulfilled. From a model based view it follows naturally that a quality assessment measure can be defined as a combination of error model residuals using common or general models assumed in all fusion methods. Thus in this paper a comparison of the two earlier proposed/modified pan-sharpening methods is performed. Preliminary experiments based on visual analysis are carried out in the urban area of Munich city for optical remote sensing multispectral data and panchromatic imagery of the WorldView-2 satellite sensor.

Building the sequence map of the human pan-genome

DEFF Research Database (Denmark)

Li, Ruiqiang; Li, Yingrui; Zheng, Hancheng

2010-01-01

analysis of predicted genes indicated that the novel sequences contain potentially functional coding regions. We estimate that a complete human pan-genome would contain approximately 19-40 Mb of novel sequence not present in the extant reference genome. The extensive amount of novel sequence contributing...

Pan computed tomography for blunt polytrauma: Are we doing too ...

African Journals Online (AJOL)

organ injuries, and better selection of patients needing intensive care or those ... Trauma Service, Pietermaritzburg, South Africa, during the 12-month period .... technology.[14] .... emergency room, while in our setting, pan CT is only performed.

panMetaDocs and DataSync - providing a convenient way to share and publish research data

Science.gov (United States)

Ulbricht, D.; Klump, J. F.

2013-12-01

In recent years research institutions, geological surveys and funding organizations started to build infrastructures to facilitate the re-use of research data from previous work. At present, several intermeshed activities are coordinated to make data systems of the earth sciences interoperable and recorded data discoverable. Driven by governmental authorities, ISO19115/19139 emerged as metadata standards for discovery of data and services. Established metadata transport protocols like OAI-PMH and OGC-CSW are used to disseminate metadata to data portals. With the persistent identifiers like DOI and IGSN research data and corresponding physical samples can be given unambiguous names and thus become citable. In summary, these activities focus primarily on 'ready to give away'-data, already stored in an institutional repository and described with appropriate metadata. Many datasets are not 'born' in this state but are produced in small and federated research projects. To make access and reuse of these 'small data' easier, these data should be centrally stored and version controlled from the very beginning of activities. We developed DataSync [1] as supplemental application to the panMetaDocs [2] data exchange platform as a data management tool for small science projects. DataSync is a JAVA-application that runs on a local computer and synchronizes directory trees into an eSciDoc-repository [3] by creating eSciDoc-objects via eSciDocs' REST API. DataSync can be installed on multiple computers and is in this way able to synchronize files of a research team over the internet. XML Metadata can be added as separate files that are managed together with data files as versioned eSciDoc-objects. A project-customized instance of panMetaDocs is provided to show a web-based overview of the previously uploaded file collection and to allow further annotation with metadata inside the eSciDoc-repository. PanMetaDocs is a PHP based web application to assist the creation of metadata in

Optimizing Neighbor Discovery for Ad hoc Networks based on the Bluetooth PAN Profile

DEFF Research Database (Denmark)

Kuijpers, Gerben; Nielsen, Thomas Toftegaard; Prasad, Ramjee

2002-01-01

IP layer neighbor discovery mechanisms rely highly on broadcast/multicast capabilities of the underlying link layer. The Bluetooth personal area network (PAN) profile has no native link layer broadcast/multicast capabilities and can only emulate this by repeatedly unicast link layer frames....... This paper introduces a neighbor discovery mechanism that utilizes the resources in the Bluetooth PAN profile more efficient. The performance of the new mechanism is investigated using a IPv6 network simulator and compared with emulated broadcasting. It is shown that the signaling overhead can...

Preparation and photocatalytic performance of Fe (III)-amidoximated PAN fiber complex for oxidative degradation of azo dye under visible light irradiation

Energy Technology Data Exchange (ETDEWEB)

Dong, Yongchun, E-mail: dye@tjpu.edu.cn [Division of Textile Chemistry and Ecology, School of Textile Science and Engineering, Tianjin Polytechnic University, Tianjin 300160 (China); State Key Laboratory Breeding Base of Photocatalysis, Fuzhou University, Fuzhou, 350002 (China); Han, Zhenbang [Division of Textile Chemistry and Ecology, School of Textile Science and Engineering, Tianjin Polytechnic University, Tianjin 300160 (China); Liu, Chunyan [Division of Textile Chemistry and Ecology, School of Textile Science and Engineering, Tianjin Polytechnic University, Tianjin 300160 (China); State Key Laboratory Breeding Base of Photocatalysis, Fuzhou University, Fuzhou, 350002 (China); Du, Fang [Division of Textile Chemistry and Ecology, School of Textile Science and Engineering, Tianjin Polytechnic University, Tianjin 300160 (China)

2010-04-15

Polyacrylonitrile (PAN) fiber was modified with hydroxylamine hydrochloride to introduce amidoxime groups onto the fiber surface. These amidoxime groups were used to react with Fe (III) ions to prepare Fe (III)-amidoximated PAN fiber complex, which was characterized using SEM, XRD, FTIR, XPS, DMA, and DRS respectively. Then the photocatalytic activity of Fe-AO-PAN was evaluated in the degradation of a typical azo dye, C. I. Reactive Red 195 in the presence of H{sub 2}O{sub 2} under visible light irradiation. Moreover, the effect of the Fe content of Fe-AO-PAN on dye degradation was also investigated. The results indicated that Fe (III) ions can crosslink between the modified PAN fiber chains by the coordination of Fe (III) ions with the amino nitrogen atoms and hydroxyl oxygen atoms of the amidoximation groups to form Fe (III)-amidoximated PAN fiber complex, and the Fe content of which is mainly determined by Fe (III) ions and amidoximation groups. Fe (III)-amidoximated PAN fiber complex is found to be activated in the visible light region. Moreover, Fe (III)-amidoximated PAN fiber complex shows the catalytic activity for dye degradation by H{sub 2}O{sub 2} at pH = 6.0 in the dark, and can be significantly enhanced by increasing light irradiation and Fe content, therefore, it can be used as a new heterogeneous Fenton photocatalyst for the effective decomposition of the dye in water. In addition, ESR spectra confirm that Fe (III)-amidoximated PAN fiber complex can generate more {center_dot}OH radicals from H{sub 2}O{sub 2} under visible light irradiation, leading to dye degradation. A possible mechanism of photocatalysis is proposed.

Measurements of PANs during the New England Air Quality Study 2002

Science.gov (United States)

Roberts, J. M.; Marchewka, M.; Bertman, S. B.; Sommariva, R.; Warneke, C.; de Gouw, J.; Kuster, W.; Goldan, P.; Williams, E.; Lerner, B. M.; Murphy, P.; Fehsenfeld, F. C.

2007-10-01

Measurements of peroxycarboxylic nitric anhydrides (PANs) were made during the New England Air Quality Study 2002 cruise of the NOAA RV Ronald H Brown. The four compounds observed, PAN, peroxypropionic nitric anhydride (PPN), peroxymethacrylic nitric anhydride (MPAN), and peroxyisobutyric nitric anhydride (PiBN) were compared with results from other continental and Gulf of Maine sites. Systematic changes in PPN/PAN ratio, due to differential thermal decomposition rates, were related quantitatively to air mass aging. At least one early morning period was observed when O3 seemed to have been lost probably due to NO3 and N2O5 chemistry. The highest O3 episode was observed in the combined plume of isoprene sources and anthropogenic volatile organic compounds (VOCs) and NOx sources from the greater Boston area. A simple linear combination model showed that the organic precursors leading to elevated O3 were roughly half from the biogenic and half from anthropogenic VOC regimes. An explicit chemical box model confirmed that the chemistry in the Boston plume is well represented by the simple linear combination model. This degree of biogenic hydrocarbon involvement in the production of photochemical ozone has significant implications for air quality control strategies in this region.

Pan-oral dose assessment: a comparative report of methodologies

International Nuclear Information System (INIS)

Shafford, J.; Pryor, M.; Hollaway, P.; Peet, D.; Oduko, J.

2015-01-01

National guidance from the Institute of Physics and Engineering in Medicine (IPEM Report 91) currently recommends that the patient dose for a pan-oral X-ray unit is measured as dose area product (DAP) replacing dose width product described in earlier guidance. An investigation identifying different methods available to carry out this measurement has been undertaken and errors in the methodologies analysed. It has been shown that there may be up to a 30 % variation in DAP measurement between methods. This paper recommends that where possible a DAP meter is used to measure the dose-area product from a pan-oral X-ray unit to give a direct DAP measurement. However, by using a solid-state dose measurement and film/ruler to calculate DAP the authors have established a conversion factor of 1.4. It is strongly recommended that wherever a DAP value is quoted the methodology used to obtain that value is also reported. (authors)

Population Screening Using Sewage Reveals Pan-Resistant Bacteria in Hospital and Community Samples.

Science.gov (United States)

Meir-Gruber, Lital; Manor, Yossi; Gefen-Halevi, Shiraz; Hindiyeh, Musa Y; Mileguir, Fernando; Azar, Roberto; Smollan, Gill; Belausov, Natasha; Rahav, Galia; Shamiss, Ari; Mendelson, Ella; Keller, Nathan

2016-01-01

The presence of pan-resistant bacteria worldwide possesses a threat to global health. It is difficult to evaluate the extent of carriage of resistant bacteria in the population. Sewage sampling is a possible way to monitor populations. We evaluated the presence of pan-resistant bacteria in Israeli sewage collected from all over Israel, by modifying the pour plate method for heterotrophic plate count technique using commercial selective agar plates. This method enables convenient and fast sewage sampling and detection. We found that sewage in Israel contains multiple pan-resistant bacteria including carbapenemase resistant Enterobacteriacae carrying blaKPC and blaNDM-1, MRSA and VRE. blaKPC carrying Klebsiella pneumonia and Enterobacter cloacae were the most common Enterobacteriacae drug resistant bacteria found in the sewage locations we sampled. Klebsiella pneumonia, Enterobacter spp., Escherichia coli and Citrobacter spp. were the 4 main CRE isolated from Israeli sewage and also from clinical samples in our clinical microbiology laboratory. Hospitals and Community sewage had similar percentage of positive samplings for blaKPC and blaNDM-1. VRE was found to be more abundant in sewage in Israel than MRSA but there were more locations positive for MRSA and VRE bacteria in Hospital sewage than in the Community. Therefore, our upgrade of the pour plate method for heterotrophic plate count technique using commercial selective agar plates can be a useful tool for routine screening and monitoring of the population for pan-resistant bacteria using sewage.

Simplified Pan-species Real-time PCR-based Detection of Plasmodium Spp. in Blood Smear.

Science.gov (United States)

Hassanpour, Gholamreza; Mirhendi, Hossein; Mohebali, Mehdi; Raeisi, Ahmad; Zeraati, Hojjat; Keshavarz, Hossein

2016-01-01

We aimed to quicken and simplify the detection of Plasmodium in blood samples by developing and testing a pan- Plasmodium real-time PCR for accurate screening of individuals suspected of malaria. A single primer/probe set for pan-species Plasmodium -specific real time PCR targeting a conserved region of the small subunit 18S ribosomal DNA was designed and evaluated for rapid diagnosis and screening of malaria infections using dried blood smears. FTA cards were used for rapid and simple DNA extraction. The primers and probes showed a positive response with the DNA extracted from bloods infected with P. falciparum and P. vivax but not with DNA extracted from various smears from uninfected blood samples. Seven positive cases positive by both microscopy and nested PCR were found among 280 blood samples taken from in South and Southeast Iran. Five samples were identified as positive for P. vivax and two as positive for P. falciparum . All positive samples were positive by real-time PCR. Furthermore, all 38-blood samples positive by microscopy were positive by real-time PCR. No microscopy-negative samples were positive by real-time PCR. By using a simple FTA card for DNA extraction and by application of the real-time PCR developed in this study, sensitivity similar to nested-PCR and microscopy was achieved. This format simplifies the detection of Plasmodium in large numbers of samples.

Changes in Frontoparietotemporal Connectivity following Do-As-I-Do Imitation Training in Chimpanzees ( Pan troglodytes).

Science.gov (United States)

Pope, Sarah M; Taglialatela, Jared P; Skiba, Sara A; Hopkins, William D

2018-03-01

Human imitation is supported by an underlying "mirror system" principally composed of inferior frontal, inferior parietal, and superior temporal cortical regions. Across primate species, differences in frontoparietotemporal connectivity have been hypothesized to explain phylogenetic variation in imitative abilities. However, if and to what extent these regions are involved in imitation in nonhuman primates is unknown. We hypothesized that "Do As I Do" (DAID) imitation training would enhance white matter integrity within and between frontoparietotemporal regions. To this end, four captive chimpanzees ( Pan troglodytes) were trained to reproduce 23 demonstrated actions, and four age-/sex-matched controls were trained to produce basic husbandry behaviors in response to manual cues. Diffusion tensor images were acquired before and after 600 min of training over an average of 112 days. Bilateral and asymmetrical changes in frontoparietotemporal white matter integrity were compared between DAID trained subjects and controls. We found that imitation trained subjects exhibited leftward shifts in both mean fractional anisotropy and tract strength asymmetry measures in brain regions within the mirror system. This is the first report of training-induced changes in white matter integrity in chimpanzees and suggests that frontoparietotemporal connectivity, particularly in the left hemisphere, may have facilitated the emergence of increasingly complex imitation learning abilities.

Object permanence in orangutans (Pongo pygmaeus), chimpanzees (Pan troglodytes), and children (Homo sapiens).

Science.gov (United States)

Call, J

2001-06-01

Juvenile and adult orangutans (n = 5; Pongo pygmaeus), chimpanzees (n = 7; Pan troglodytes), and 19- and 26-month-old children (n = 24; Homo sapiens) received visible and invisible displacements. Three containers were presented forming a straight line, and a small box was used to displace a reward under them. Subjects received 3 types of displacement: single (the box visited 1 container), double adjacent (the box visited 2 contiguous containers), and double nonadjacent (the box visited 2 noncontiguous containers). All species performed at comparable levels, solving all problems except the invisible nonadjacent displacements. Visible displacements were easier than invisible, and single were easier than double displacements. In a 2nd experiment, subjects saw the baiting of either 2 adjacent or 2 nonadjacent containers with no displacements. All species selected the empty container more often when the baited containers were nonadjacent than when they were adjacent. It is hypothesized that a response bias and inhibition problem were responsible for the poor performance in nonadjacent displacements.

Osteological histology of the Pan-Alcidae (Aves, Charadriiformes): correlates of wing-propelled diving and flightlessness.

Science.gov (United States)

Smith, N Adam; Clarke, Julia A

2014-02-01

Although studies of osteological morphology, gross myology, myological histology, neuroanatomy, and wing-scaling have all documented anatomical modifications associated with wing-propelled diving, the osteohistological study of this highly derived method of locomotion has been limited to penguins. Herein we present the first osteohistological study of the derived forelimbs and hind limbs of wing-propelled diving Pan-Alcidae (Aves, Charadriiformes). In addition to detailing differences between wing-propelled diving charadriiforms and nondiving charadriiforms, microstructural modifications to the humeri, ulnae and femora of extinct flightless pan-alcids are contrasted with those of volant alcids. Histological thin-sections of four species of pan-alcids (Alca torda, †Alca grandis, †Pinguinus impennis, †Mancalla cedrosensis) and one outgroup charadriiform (Stercorarius longicaudus) were compared. The forelimb bones of wing-propelled diving charadriiforms were found to have significantly thicker (∼22%) cortical bone walls. Additionally, as in penguins, the forelimbs of flightless pan-alcids are found to be osteosclerotic. However, unlike the pattern documented in penguins that display thickened cortices in both forelimbs and hind limbs, the forelimb and hind limb elements of pan-alcids display contrasting microstructural morphologies with thickened forelimb cortices and relatively thinner femoral cortices. Additionally, the identification of medullary bone in the sampled †Pinguinus impennis specimen suggests that further osteohistological investigation could provide an answer to longstanding questions regarding sexual dimorphism of Great Auks. Finally, these results suggest that it is possible to discern volant from flightless wing-propelled divers from fragmentary fossil remains. Copyright © 2013 Wiley Periodicals, Inc.

Surface Modification of Electrospun PVDF/PAN Nanofibrous Layers by Low Vacuum Plasma Treatment

Directory of Open Access Journals (Sweden)

Fatma Yalcinkaya

2016-01-01

Full Text Available Nanofibres are very promising for water remediation due to their high porosity and small pore size. Mechanical properties of nanofibres restrict the application of pressure needed water treatments. Various PAN, PVDF, and PVDF/PAN nanofibre layers were produced, and mechanical properties were improved via a lamination process. Low vacuum plasma treatment was applied for the surface modification of nanofibres. Atmospheric air was used to improve hydrophilicity while sulphur hexafluoride gas was used to improve hydrophobicity of membranes. Hydrophilic membranes showed higher affinity to attach plasma particles compared to hydrophobic membranes.

Pan-Africanism Caught in the Crossfire of Identity and Globalization

African Journals Online (AJOL)

Pan-Africanism Caught in the Crossfire of Identity and Globalization. ... the extent that 'globalization' is as much a subject of media interest as of academic enquiry. ... over time, across space, and within and between cultures and social classes.

Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure.

Science.gov (United States)

Gordon, Sean P; Contreras-Moreira, Bruno; Woods, Daniel P; Des Marais, David L; Burgess, Diane; Shu, Shengqiang; Stritt, Christoph; Roulin, Anne C; Schackwitz, Wendy; Tyler, Ludmila; Martin, Joel; Lipzen, Anna; Dochy, Niklas; Phillips, Jeremy; Barry, Kerrie; Geuten, Koen; Budak, Hikmet; Juenger, Thomas E; Amasino, Richard; Caicedo, Ana L; Goodstein, David; Davidson, Patrick; Mur, Luis A J; Figueroa, Melania; Freeling, Michael; Catalan, Pilar; Vogel, John P

2017-12-19

While prokaryotic pan-genomes have been shown to contain many more genes than any individual organism, the prevalence and functional significance of differentially present genes in eukaryotes remains poorly understood. Whole-genome de novo assembly and annotation of 54 lines of the grass Brachypodium distachyon yield a pan-genome containing nearly twice the number of genes found in any individual genome. Genes present in all lines are enriched for essential biological functions, while genes present in only some lines are enriched for conditionally beneficial functions (e.g., defense and development), display faster evolutionary rates, lie closer to transposable elements and are less likely to be syntenic with orthologous genes in other grasses. Our data suggest that differentially present genes contribute substantially to phenotypic variation within a eukaryote species, these genes have a major influence in population genetics, and transposable elements play a key role in pan-genome evolution.

Femi Osofisan's discourse on Pan-Africanism and reconciliation in ...

African Journals Online (AJOL)

The paper is a critical appraisal of Femi Osofisan's ideological perspectives of Pan-Africanism, imperialism and reconciliation as exemplified in his plays especially in Nkrumah-Ni… Africa-Ni and Reel, Rwanda. The paper also explores the playwright's views on the dynamics of the problems confronting the African continent ...

Sparse Multi-Pitch and Panning Estimation of Stereophonic Signals

DEFF Research Database (Denmark)

Kronvall, Ted; Jakobsson, Andreas; Hansen, Martin Weiss

2016-01-01

In this paper, we propose a novel multi-pitch estimator for stereophonic mixtures, allowing for pitch estimation on multi-channel audio even if the amplitude and delay panning parameters are unknown. The presented method does not require prior knowledge of the number of sources present in the mix...

Cannabis body packing : a case report | Ngatchou | Pan African ...

African Journals Online (AJOL)

Cannabis body packing : a case report. ... a diffuse abdominal plain to the emergency department. Abdominal X-ray demonstrated multiple foreign bodies along the intestinal tract, which were found to be cannabis packets. The patient was treated conservatively with a good result. The Pan African Medical Journal 2016;24.

PanEurasian Experiment (PEEX): Modelling Platform for Earth System Observations and Forecasting

Science.gov (United States)

Baklanov, Alexander; Mahura, Alexander; Penenko, Vladimir; Zilitinkevich, Sergej; Kulmala, Markku

2014-05-01

As the part of the PEEX initiative, for the purpose of supporting the PEEX observational system and answering on the PEEX scientific questions, a hierarchy/ framework of modern multi-scale models for different elements of the Earth System integrated with the observation system is needed. One of the acute topics in the international debate on land-atmosphere interactions in relation to global change is the Earth System Modeling (ESM). The question is whether the ESM components actually represent how the Earth is functioning. The ESMs consist of equations describing the processes in the atmosphere, ocean, cryosphere, terrestrial and marine biosphere. ESMs are the best tools for analyzing the effect of different environmental changes on future climate or for studying the role of whole processes in the Earth System. These types of analysis and prediction of the future change are especially important in the Arctic latitudes, where climate change is proceeding fastest and where near-surface warming has been about twice the global average during the recent decades. The processes, and hence parameterization, in ESMs are still based on insufficient knowledge of physical, chemical and biological mechanisms involved in the climate system and the resolution of known processes is insufficient. Global scale modeling of land-atmosphere-ocean interactions using ESMs provides a way to explore the influence of spatial and temporal variation in the activities of land system and on climate. There is a lack, however, ways to forward a necessary process understanding effectively to ESMs and to link all this to the decision-making process. Arctic-boreal geographical domain plays significant role in terms of green-house gases and anthropogenic emissions and as an aerosol source area in the Earth System. The PEEX Modelling Platform (PEEX-MP) is characterized by: • An ensemble approach with the integration of modelling results from different models/ countries etc.; • A hierarchy of

The pan-americanist imaginary and O Cruzeiro Internacional (1957-1965

Directory of Open Access Journals (Sweden)

Marlise Regina Meyrer

2016-08-01

Full Text Available Abstract The article aims to identify the main ideas that supported the launch of the magazine O Cruzeiro Internacional (1957-1965, Brazilian journal published in Spanish and distributed throughout Latin America, Spain and areas of the United States. It tries to understand how these ideas have permeated the diffusion of a specific pan-American imaginary on certain groups and/or governments that guided through texts and photographic images a set of social representations on Latin America. These, in general, were selected for the defense of a Latin American unity under the economic, political and cultural hegemony of Brazil, at the regional level and the of USA worldwide.   Keywords: Photojournalism – Latin America; O Cruzeiro Internacional; Journals - Brazil.   Original title: O imaginário pan-americanista e O Cruzeiro Internacional (1957-1965.

Comparison of TEVAR resin beads, PAN fibers, and ePTFE membranes as a solid support for Aliquat-336 in immobilized liquid extraction chromatography for separation of actinides

International Nuclear Information System (INIS)

Joe Dauner; Steve Workman

2012-01-01

The following paper covers a comparison of two new systems to traditional TEVA R resin systems for the analytical separation of actinides by immobilized liquid-liquid extraction using Aliquat-336. The new systems are using expanded polytetrafluroethane (ePTFE) membrane or polyacrylonitrile (PAN) fibers as the solid support. The systems are compared in two ways. First in how much Aliquat-336 they contain with the Vs, ratio of volume of Aliquat-336 to volume of polymeric support, being 0.158, 0.483, and 0.590 for the TEVA R resin, PAN fibers, and the ePTFE systems, respectively. The second comparison is in their performance capacity of extraction of uranyl chloride anion complex. The fiber and resins systems show similar capacities, and the membrane system being an order of magnitude less than the other systems. A cost comparison demonstrates the savings advantages of using a fiber based support compared with resin and membrane support systems. (author)

Fabrication of novel chitosan/PAN/magnetic ZSM-5 zeolite coated sponges for absorption of oil from water surfaces.

Science.gov (United States)

Samadi, Saman; Yazd, Shabnam Sharif; Abdoli, Hossein; Jafari, Pooya; Aliabadi, Majid

2017-12-01

In the present study, the chitosan (bottom layer)/polyacrylonitrile (top layer, PAN) nanofibers were coated on the sponge surface. The synthesized magnetic Fe 3 O 4 - ZSM-5 nanozeolites have been loaded into the chitosan/PAN nanofibers to increase the performance of nanofibers toward absorption of lubricating oil, motor oil and pump oil from water surfaces. Scanning electron microscope (SEM), Transmission electron microscope (TEM) and X-ray diffraction (XRD) analysis were used to characterize the synthesized nanozeolites. The morphology and wettability of nanofibers were determined using SEM and water contact angle tests. The influence of Fe 3 O 4 - ZSM-5 nanozeolite content and chitosan/PAN/Fe 3 O 4 - ZSM-5 nanofiber thickness was evaluated on the potential of sponges for oils absorption. The maximum capacity of the chitosan/PAN/Fe 3 O 4 - ZSM-5 nanofibers coated sponges for absorption of motor oil, lubricating oil and pump oil was found to be 99.4, 95.3 and 88.1g/g, in Fe 3 O 4 - ZSM-5 2wt.% and nanofiber thickness of 12μm (chitosan layer of 2μm and PAN layer of 10μm). The reusability of nanofibrous sponges showed that the hydrophobic chitosan/PAN/Fe 3 O 4 - ZSM-5 nanofibers coated sponges can be easily reused in water-oil separation for many cycles. Copyright © 2017 Elsevier B.V. All rights reserved.

Observations of peroxyacetyl nitrate (PAN) in the upper troposphere by the Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS)

Science.gov (United States)

Tereszchuk, K. A.; Moore, D. P.; Harrison, J. J.; Boone, C. D.; Park, M.; Remedios, J. J.; Randel, W. J.; Bernath, P. F.

2013-01-01

Peroxyacetyl nitrate (CH3CO·O2NO2, abbreviated as PAN) is a trace molecular species present in the troposphere and lower stratosphere due primarily to pollution from fuel combustion and the pyrogenic outflows from biomass burning. In the lower troposphere, PAN has a relatively short life-time and is principally destroyed within a few hours through thermolysis, but it can act as a reservoir and carrier of NOx in the colder temperatures of the upper troposphere where UV photolysis becomes the dominant loss mechanism. Pyroconvective updrafts from large biomass burning events can inject PAN into the upper troposphere and lower stratosphere (UTLS), providing a means for the long-range transport of NOx. Given the extended lifetimes at these higher altitudes, PAN is readily detectable via satellite remote sensing. A new PAN data product is now available for the Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) Version 3.0 data set. We report measurements of PAN in Boreal biomass burning plumes recorded during the Quantifying the impact of BOReal forest fires on Tropospheric oxidants over the Atlantic using Aircraft and Satellites (BORTAS) campaign. The retrieval method employed and errors analysis are described in full detail. The retrieved volume mixing ratio (VMR) profiles are compared to coincident measurements made by the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) instrument on the European Space Agency (ESA) ENVIronmental SATellite (ENVISAT). Three ACE-FTS occultations containing measurements of Boreal biomass burning outflows, recorded during BORTAS, were identified as having coincident measurements with MIPAS. In each case, the MIPAS measurements demonstrated good agreement with the ACE-FTS VMR profiles for PAN. The ACE-FTS PAN data set is used to obtain zonal mean distributions of seasonal averages from ~5 to 20 km. A strong seasonality is clearly observed for PAN concentrations in the global UTLS. Since the

NaF-loaded core-shell PAN-PMMA nanofibers as reinforcements for Bis-GMA/TEGDMA restorative resins.

Science.gov (United States)

Cheng, Liyuan; Zhou, Xuegang; Zhong, Hong; Deng, Xuliang; Cai, Qing; Yang, Xiaoping

2014-01-01

A kind of core-shell nanofibers containing sodium fluoride (NaF) was produced and used as reinforcing materials for dimethacrylate-based dental restorative resins in this study. The core-shell nanofibers were prepared by coaxial-electrospinning with polyacrylonitrile (PAN) and poly(methyl methacrylate) (PMMA) solutions as core and shell fluids, respectively. The produced PAN-PMMA nanofibers varied in fiber diameter and the thickness of PMMA shell depending on electrospinning parameters. NaF-loaded nanofibers were obtained by incorporating NaF nanocrystals into the core fluid at two loadings (0.8 or 1.0wt.%). Embedment of NaF nanocrystals into the PAN core did not damage the core-shell structure. The addition of PAN-PMMA nanofibers into Bis-GMA/TEGDMA clearly showed the reinforcement due to the good interfacial adhesion between fibers and resin. The flexural strength (Fs) and flexural modulus (Ey) of the composites decreased slightly as the thickness of PMMA shell increasing. Sustained fluoride releases with minor initial burst release were achieved from NaF-loaded core-shell nanofibers and the corresponding composites, which was quite different from the case of embedding NaF nanocrystals into the dental resin directly. The study demonstrated that NaF-loaded PAN-PMMA core-shell nanofibers were not only able to improve the mechanical properties of restorative resin, but also able to provide sustained fluoride release to help in preventing secondary caries. © 2013.

Effect of electrolytes concentration on recovery of cesium from AMP-PAN by Electrodialysis-Ion Exchange (EDIX)

International Nuclear Information System (INIS)

Mahendra, Ch.; Rajan, K.K.; SatyaSai, P.M.; Anand Babu, C.

2014-01-01

Cesium from the simulated acidic waste solution was separated using Ammonium Molybdophosphate (AMP) - Polyacrylonitrile (PAN) ion exchange resin in column operations. Electrodialysis - Ion exchange (EDIX) has been tried for the recovery of cesium from the AMP-PAN which was saturated with cesium. The electrodialysis setup consists of three compartments; cesium loaded AMP-PAN is placed in the middle compartment and is separated from the anode and cathode compartments by cation exchange membranes. Ammonium sulphate was used as anolyte and HNO 3 as catholyte. 0.1N HNO 3 was circulated in the middle compartment containing AMP-PAN to keep the resin in acidic form. On application of potential, the ammonium ions from the anode compartment migrate towards cathode through the middle compartment where they exchange with cesium ions on the resin and the exchanged cesium ions migrate towards cathode to get concentrated. Some part of cesium is recovered in the middle compartment due to convection. Cesium recovery from the AMP-PAN in the electrodialysis setup was studied at different anolyte and catholyte concentrations. All the experiments were carried out at constant current density of 40 mA/cm 2 for 15h. It was found that more than 50% of cesium recovery was observed for all the experiments studied and recovery percentage increased with increasing the anolyte concentration. It was observed that the electrolytes concentration affects the voltage drop across the cell

Investigation of strontium and uranium sorption onto zirconium-antimony oxide/polyacrylonitrile (Zr-Sb oxide/PAN) composite using experimental design

Energy Technology Data Exchange (ETDEWEB)

Cakir, Pelin; Inan, Suleyman, E-mail: suleyman.inan@ege.edu.tr; Altas, Yuksel

2014-04-01

Highlights: • We model Sr{sup 2+} and UO{sub 2}{sup 2+} sorption onto Zr-Sb oxide/PAN composite. • Central composite design was separately employed for Sr{sup 2+} and UO{sub 2}{sup 2+} sorption. • The model F values indicate that both models are statistically significant. • All of the single factors were determined as significant for the sorption of Sr{sup 2+} and UO{sub 2}{sup 2+}. • Zr-Sb oxide/PAN can be used effectively for Sr{sup 2+} and UO{sub 2}{sup 2+} removal from acidic solutions. - Abstract: A study on the sorption of strontium (Sr{sup 2+}) and uranium (UO{sub 2}{sup 2+}) onto zirconium-antimony oxide/PAN (Zr-Sb oxide/PAN) composite was conducted. The zirconium-antimony oxide was synthesized and was then turned into composite spheres by mixing it with polyacrylonitrile (PAN). The single and combined effects of independent variables such as initial pH, temperature, initial ion concentration and contact time on the sorption of Sr{sup 2+} and UO{sub 2}{sup 2+} were separately analyzed using response surface methodology (RSM). Central composite design (CCD) was separately employed for Sr{sup 2+} and UO{sub 2}{sup 2+} sorption. Analysis of variance (ANOVA) revealed that all of the single effects found statistically significant on the sorption of Sr{sup 2+} and UO{sub 2}{sup 2+}. Probability F-values (F = 2.45 × 10{sup −08} and F = 9.63 × 10{sup −12} for Sr{sup 2+} and UO{sub 2}{sup 2+}, respectively) and correlation coefficients (R{sup 2} = 0.96 for Sr{sup 2+} and R{sup 2} = 0.98 for UO{sub 2}{sup 2+}) indicate that both models fit the experimental data well. At optimum sorption conditions Sr{sup 2+} and UO{sub 2}{sup 2+} sorption capacities of the composite were found as 39.78 and 60.66 mg/g, respectively. Sorption isotherm data pointed out that Langmuir model is more suitable for the Sr{sup 2+} sorption, whereas the sorption of UO{sub 2}{sup 2+} was correlated well with the Langmuir and Freundlich models. Thermodynamic parameters such as �

Radionuclide concentrations in salt pans in the coastal area of Cox's Bazar, Bangladesh

International Nuclear Information System (INIS)

Alam, M.N.; Chowdhury, M.I.; Zafar, M.; Kamal, M.; Ghose, S.; Kamal, A.H.M.

1998-01-01

Radionuclide concentrations of 226 Ra, 232 Th, 137 Cs, 134 Cs and 40 K in samples of water, soil and salt from three gradients of salt pans (reservoir, condenser and crystalliser) in the coastal area of Cox's Bazar, Bangladesh and in samples of refined salts were measured using γ-spectrometry. The activities of 226 Ra in the salt pans were found to be in the range 3·18±1·02 Bq l -1 in water to 25·17±5·76 Bq kg -1 in soil; 232 Th activities were 2·01±0·89 Bq l -1 in water to 42·33±2·54 Bq kg -1 in soil, and 40 K activities ranged from 109·60±27·77 Bq l -1 in water to 651·89±65·89 Bq kg -1 in soil. No 137 Cs or 134 Cs was found in soil, salt and water from the salt pans investigated. (Copyright (c) 1998 Elsevier Science B.V., Amsterdam. All rights reserved.)

Palaeoamyda messeliana nov. comb. (Testudines, Pan-Trionychidae) from the Eocene Messel Pit and Geiseltal localities, Germany, taxonomic and phylogenetic insights.

Science.gov (United States)

Cadena, Edwin

2016-01-01

Abundant pan-trionychid (soft-shell) turtles specimens have been found in Eocene sequences of central Europe, particularly from two localities in Germany, the Messel Pit (a UNESCO World Natural Heritage Site) and Geiseltal, traditionally attributed to Trionyx messelianus or Rafetoides austriacus . Over the last two decades new specimens of this taxon from these two localities have been discovered and fully prepared. However, they have remained unstudied, as well as their phylogenetic position inside Pan-Trionychidae is unknown. Five new specimens of Palaeoamyda messeliana nov. comb. from Messel Pit and Geiseltal localities are fully described here. A revised diagnosis for the species is also presented here, together with its inclusion in a phylogenetic analysis of Pan-Trionychidae that shows that this species is sister to the extant Amyda cartilaginea , one of the most abundant pan-trionychid (soft-shell) turtles from Asia, both members of the clade Chitrini. The specimens described in here are among the best and most complete fossil pan-trionychid skeletons so far known.

Shape of the orbital opening: individual characterization and analysis of variability in modern humans, Gorilla gorilla, and Pan troglodytes.

Science.gov (United States)

Schmittbuhl, M; Le Minor, J M; Allenbach, B; Schaaf, A

1999-05-01

The description of the human orbital shape is principally qualitative in the classical literature, and characterised by adjectives such as circular, rectangular or quadrangular. In order to provide a precise quantification and interpretation of this shape, a study based on automatic image analysis and Fourier analysis was carried out on 45 human skulls (30 males, 15 females), and for comparison on 61 skulls of Gorilla gorilla (40 males, 21 females), and 34 skulls of Pan troglodytes (20 males, 14 females). Sexual dimorphism in the shape of the orbital opening was not demonstrated. Its dominant morphological features could be characterized by Fourier analysis; elliptical elongation and quadrangularity were dominant morphological features of the shape of the orbital opening in the three species. Elliptical elongation was more marked in humans and Pan, whereas quadrangularity was particularly emphasized in Gorilla. An intraspecific variability of the shape of the orbital opening existed in humans, Gorilla and Pan, and seemed close in the three species. Interspecific partition between humans, Gorilla and Pan was demonstrated despite the variability observed in the three species studied. Interspecific differences between Gorilla and the Pan-humans group were principally explained by the differences in quadrangularity, and by differences in orientation of triangularity and pentagonality. Differences in the shape of the orbital opening between humans and Pan were principally explained by differences in hexagonality, and by differences in orientation of quadrangularity. A closeness of shape between some humans and some individuals in Pan and, to a lesser degree, with some individuals in Gorilla was observed, demonstrating the existence of a morphological continuum of the shape of the orbital opening in hominoids.

Generalized Pan-European Geological Database for Shallow Geothermal Installations

Directory of Open Access Journals (Sweden)

Johannes Müller

2018-01-01

Full Text Available The relatively high installation costs for different types of shallow geothermal energy systems are obstacles that have lowered the impact of geothermal solutions in the renewable energy market. In order to reduce planning costs and obtain a lithological overview of geothermal potentials and drilling conditions, a pan-European geological overview map was created using freely accessible JRC (Joint Research Centre data and ArcGIS software. JRC data were interpreted and merged together in order to collect information about the expenditure of installing geothermal systems in specific geological set-ups, and thereby select the most economic drilling technique. Within the four-year project of the European Union’s Horizon 2020 Research and Innovation Program, which is known as “Cheap-GSHPs” (the Cheap and efficient application of reliable Ground Source Heat exchangers and Pumps, the most diffused lithologies and corresponding drilling costs were analyzed to provide a 1 km × 1 km raster with the required underground information. The final outline map should be valid throughout Europe, and should respect the INSPIRE (INfrastructure for SPatial InfoRmation in Europe guidelines.

EURATOM Success Stories in Facilitating Pan-European E&T Collaborative Efforts

International Nuclear Information System (INIS)

Garbil, R.

2016-01-01

Full text: The European Atomic Energy Community (Euratom) Research and Training framework programmes are benefiting from a consistent success in pursuing excellence in research and facilitating Pan-European collaborative efforts across a broad range of nuclear science and technologies, nuclear fission and radiation protection. To fulfil Euratom R&D programmes keys objectives of maintaining high levels of nuclear knowledge and building a more dynamic and competitive European industry, promotion of Pan-European mobility of researchers are implemented by co-financing transnational access to research infrastructures and joint research activities through to research and innovation and coordination and support actions funding schemes. Establishment by the research community of European technology platforms are being capitalized. Mapping of research infrastructures and E&T capabilities is allowing a closer cooperation within the European Union and beyond, benefiting from multilateral international agreements and from closer cooperation between Euratom, OECD/NEA and IAEA and international fora. “Euratom success stories” in facilitating Pan-European E&T collaborative efforts through research and training framework programmes show the benefits of research efforts in key fields, of building an effective “critical mass”, of promoting the creation of “centres of excellence” with an increased support for “open access to key research infrastructures”, exploitation of research results, management of knowledge, dissemination and sharing of learning outcomes. (author

Transpressional granite-emplacement model: Structural and magnetic study of the Pan-African Bandja granitic pluton (West Cameroon)

Science.gov (United States)

Sandjo, A. F. Yakeu; Njanko, T.; Njonfang, E.; Errami, E.; Rochette, P.; Fozing, E.

2016-02-01

The Pan-African NE-SW elongated Bandja granitic pluton, located at the western part of the Pan-African belt in Cameroon, is a K-feldspar megacryst granite. It is emplaced in banded gneiss and its NW border underwent mylonitization. The magmatic foliation shows NE-SW and NNE-SSW strike directions with moderate to strong dip respectively in its northern and central parts. This mostly, ferromagnetic granite displays magnetic fabrics carried by magnetite and characterized by (i) magnetic foliation with best poles at 295/34, 283/33 and 35/59 respectively in its northern, central and southern parts and (ii) a subhorizontal magnetic lineation with best line at 37/8, 191/9 and 267/22 respectively in the northern, central and southern parts. Magnetic lineation shows an `S' shape trend that allows to (1) consider the complete emplacement and deformation of the pluton during the Pan-African D 2 and D 3 events which occurred in the Pan-African belt in Cameroon and (2) reorganize Pan-African ages from Nguiessi Tchakam et al. (1997) compared with those of the other granitic plutons in the belt as: 686 ±17 Ma (Rb/Sr) for D 1 age of metamorphism recorded in gneiss; and the period between 604-557 Ma for D 2-D 3 emplacement and deformation age of the granitic pluton in a dextral ENE-WSW shear movement.

Rapid scoring of genes in microbial pan-genome-wide association studies with Scoary.

Science.gov (United States)

Brynildsrud, Ola; Bohlin, Jon; Scheffer, Lonneke; Eldholm, Vegard

2016-11-25

Genome-wide association studies (GWAS) have become indispensable in human medicine and genomics, but very few have been carried out on bacteria. Here we introduce Scoary, an ultra-fast, easy-to-use, and widely applicable software tool that scores the components of the pan-genome for associations to observed phenotypic traits while accounting for population stratification, with minimal assumptions about evolutionary processes. We call our approach pan-GWAS to distinguish it from traditional, single nucleotide polymorphism (SNP)-based GWAS. Scoary is implemented in Python and is available under an open source GPLv3 license at https://github.com/AdmiralenOla/Scoary .

Effect of Buttermilk on the Physicochemical, Rheological, and Sensory Qualities of Pan and Pita Bread

OpenAIRE

Al-Jahani, Amani H.

2017-01-01

The aim of this study was to evaluate the influence of buttermilk on the physicochemical and sensory attributes of pan and pita breads. Different amounts of buttermilk (30, 60, and 100% of added water) were mixed with other ingredients of pan and pita bread formulations. The doughs and bread were analyzed for rheological, physicochemical, and sensory qualities. The results demonstrated that incorporation of different concentrations of buttermilk in bread formulations progressively enhanced wa...

A study on elongation/contraction behavior and mechanical properties of oxy-polyacrylonitrile(PAN) fiber in basic/acidic solution for artificial muscle applications

Energy Technology Data Exchange (ETDEWEB)

Lee, Y.K.; Kim, S.W.; Lee, K.S.; Cho, I.H.; Lee, J.H.; Lee, J.W. [Sungkyunkwan University, Suwon (Korea); Kim, K.J. [University of Nevada, Reno (United States); Nam, J.D. [Sungkyunkwan University, Suwon (Korea)

2002-07-01

Oxy-PAN fiber prepared from the preoxidation and saponification of raw PAN fiber is known to elongate and contract when immersed in basic and acidic solutions, respectively. In this study, about 30% elongation in NaOH solution and 30{approx}50% contraction in HCl solution have been observed. In mechanical test, the mechanical properties of oxy-PAN fiber in the contracted state was stronger than that in the elongated state. These behaviors and mechanical properties are compared to those of living muscle and linear actuator. The change of length in NaOH and HCl solutions is due to switching between a hydrophilic and a hydrophobic structure. Other reasons are exchange of ion and water in/out of oxy-PAN fiber, and osmotic pressure difference associated with relevant ions. Much studies are needed to clarify the effective factors on but the oxy-PAN fiber's elongation/contraction behavior and mechanical properties, but the oxy-PAN fiber prepared in our laboratory has a sufficient potential for application as artificial muscle and linear actuator. (author). 20 refs., 1 tab., 9 figs.

Harlequin color change in preterm infant | Hamida | Pan African ...

African Journals Online (AJOL)

Pan African Medical Journal. Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives · Journal Home > Vol 22, No 1 (2015) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Download this PDF file. The PDF file you selected should ...

Sexuality in Nigerian older adults | Olatayo | Pan African Medical ...

African Journals Online (AJOL)

Pan African Medical Journal. Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives · Journal Home > Vol 22, No 1 (2015) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Download this PDF file. The PDF file you selected should ...

FIRST RESULTS FROM Pan-STARRS1: FAINT, HIGH PROPER MOTION WHITE DWARFS IN THE MEDIUM-DEEP FIELDS

Energy Technology Data Exchange (ETDEWEB)

Tonry, J. L.; Flewelling, H. A.; Deacon, N. R.; Burgett, W. S.; Chambers, K. C.; Kaiser, N.; Kudritzki, R.-P.; Hodapp, K. W.; Magnier, E. A.; Morgan, J. S.; Wainscoat, R. J. [Institute for Astronomy, University of Hawaii, 2680 Woodlawn Drive, Honolulu, HI 96822 (United States); Stubbs, C. W.; Kilic, M.; Chornock, R.; Berger, E. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Price, P. A. [Department of Astrophysical Sciences, Princeton University, Princeton, NJ 08544 (United States)

2012-01-20

The Pan-STARRS1 survey has obtained multi-epoch imaging in five bands (Pan-STARRS1 g{sub P1}, r{sub P1}, i{sub P1}, z{sub P1}, and y{sub P1}) on 12 'Medium-Deep fields', each of which spans a 3.{sup 0}3 circle. For the period between 2009 April and 2011 April these fields were observed 50-200 times. Using a reduced proper motion diagram, we have extracted a list of 47 white dwarf (WD) candidates whose Pan-STARRS1 astrometry indicates a non-zero proper motion at the 6{sigma} level, with a typical 1{sigma} proper motion uncertainty of 10 mas yr{sup -1}. We also used astrometry from the Sloan Digital Sky Survey (when available) and USNO-B to assess our proper motion fits. None of the WD candidates exhibits evidence of statistically significant parallaxes, with a typical 1{sigma} uncertainty of 8 mas. Twelve of these candidates are known WDs, including the high proper motion (1.''7 yr{sup -1}) WD LHS 291. We confirm seven more objects as WDs through optical spectroscopy. Based on the Pan-STARRS1 colors, ten of the stars are likely to be cool WDs with 4170 K Pan-STARRS1 data. With continued coverage from the Medium-Deep Field Survey and the 3{pi} survey, Pan-STARRS1 should find many more high proper motion WDs that are part of the old thick disk and halo.

Bullose diabétique | El Makrini | Pan African Medical Journal

African Journals Online (AJOL)

Therapeutically, no particular treatment seems necessary except local antiseptic care after the recess bubbles. Bullosis diabeticorum is a characteristic skin complication of diabetes. Its etiology is still unknown. Its evolution is benign and its management is essentially preventive. Pan African Medical Journal 2016; 23 ...

Optimization of strontium adsorption from aqueous solution using (mn-Zr) oxide-pan composite spheres

International Nuclear Information System (INIS)

Inan, S.; Altas, Y.

2009-01-01

The processes based on adsorption and ion exchange have a great role for the pre-concentration and separation of toxic, long lived radionuclides from liquid waste. In Nuclear waste management, the removal of long lived, radiotoxic isotopes from radioactive waste such as strontium reduces the storage problems and facilitates the disposal of the waste. Depending on the waste type, a variety of adsorbents and/or ion exchangers are used. Due to the amorphous structure of hydrous oxides and their mixtures, they don't have reproducible properties. Besides, obtained powders are very fine particles and they can cause operational problems such as pressure drop and filtration. Therefore they are not suitable for column applications. These reasons have recently expedited the study on the preparation of organic-inorganic composite adsorbent beads for industrial applications. PAN, as a stable and porous support for fine particles, provides the utilization of ion exchangers in large scale column applications. The utilization of PAN as a support material with many inorganic ion exchangers was firstly achieved by Sebesta in the beginning of 1990's. Later on, PAN based composite ion exchangers were prepared and used for the removal of radionuclides and heavy metal ions from aqueous solution and waste waters. In this study, spherical (Mn-Zr)oxide-PAN composite were prepared for separation of strontium from aqueous solution in a wide pH range. Sr 2 + adsorption of composite adsorbent was optimized by using experimental design 'Central Composite Design' model.

The Pan-American Federation of Neurological Societies (PAFNS): A New Regional Organization.

Science.gov (United States)

Medina, Marco T; Román, Gustavo C

2016-07-15

The Pan-American Federation of Neurological Societies (PAFNS) was created on 15 November 2011 during the 20th World Congress of Neurology in Marrakech by virtue of the "Declaration of Morocco" signed by the WFN Latin American delegates and ratified on 5 March 2012 by delegates attending the 13th Pan-American Congress of Neurology in La Paz, Bolivia. On 20 March 2013 delegates attending the 65th Annual Meeting of the American Academy of Neurology in San Diego, California, USA, gave formal approval to the PAFNS Constitution. The neurological societies from the following countries have approved and signed the constitution as founding members and active ordinary members: Argentina, Brazil, Bolivia, Chile, Colombia, Costa Rica, Cuba, Dominican Republic, Ecuador, El Salvador, Guatemala, Honduras, Mexico, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Uruguay, and Venezuela. The Ibero-American Stroke Society (SIECV), the Commission on Latin American Affairs of the International League Against Epilepsy (ILAE) and the World Sleep Society have requested the status of Associate Members. The WFN and the American Academy of Neurology provided seed grants for the creation of the Pan-American Federation of Neurological Societies. PAFNS represents a major step for the improvement of regional neurological care, education and research. Copyright © 2016 Elsevier B.V. All rights reserved.

In-silico Metabolome Target Analysis Towards PanC-based Antimycobacterial Agent Discovery.

Science.gov (United States)

Khoshkholgh-Sima, Baharak; Sardari, Soroush; Izadi Mobarakeh, Jalal; Khavari-Nejad, Ramezan Ali

2015-01-01

Mycobacterium tuberculosis, the main cause of tuberculosis (TB), has still remained a global health crisis especially in developing countries. Tuberculosis treatment is a laborious and lengthy process with high risk of noncompliance, cytotoxicity adverse events and drug resistance in patient. Recently, there has been an alarming rise of drug resistant in TB. In this regard, it is an unmet need to develop novel antitubercular medicines that target new or more effective biochemical pathways to prevent drug resistant Mycobacterium. Integrated study of metabolic pathways through in-silico approach played a key role in antimycobacterial design process in this study. Our results suggest that pantothenate synthetase (PanC), anthranilate phosphoribosyl transferase (TrpD) and 3-isopropylmalate dehydratase (LeuD) might be appropriate drug targets. In the next step, in-silico ligand analysis was used for more detailed study of chemical tractability of targets. This was helpful to identify pantothenate synthetase (PanC, Rv3602c) as the best target for antimycobacterial design procedure. Virtual library screening on the best ligand of PanC was then performed for inhibitory ligand design. At the end, five chemical intermediates showed significant inhibition of Mycobacterium bovis with good selectivity indices (SI) ≥10 according to Tuberculosis Antimicrobial Acquisition & Coordinating Facility of US criteria for antimycobacterial screening programs.

Palaeoamyda messeliana nov. comb. (Testudines, Pan-Trionychidae from the Eocene Messel Pit and Geiseltal localities, Germany, taxonomic and phylogenetic insights

Directory of Open Access Journals (Sweden)

Edwin Cadena

2016-10-01

Full Text Available Background Abundant pan-trionychid (soft-shell turtles specimens have been found in Eocene sequences of central Europe, particularly from two localities in Germany, the Messel Pit (a UNESCO World Natural Heritage Site and Geiseltal, traditionally attributed to Trionyx messelianus or Rafetoides austriacus. Over the last two decades new specimens of this taxon from these two localities have been discovered and fully prepared. However, they have remained unstudied, as well as their phylogenetic position inside Pan-Trionychidae is unknown. Results Five new specimens of Palaeoamyda messeliana nov. comb. from Messel Pit and Geiseltal localities are fully described here. A revised diagnosis for the species is also presented here, together with its inclusion in a phylogenetic analysis of Pan-Trionychidae that shows that this species is sister to the extant Amyda cartilaginea, one of the most abundant pan-trionychid (soft-shell turtles from Asia, both members of the clade Chitrini. The specimens described in here are among the best and most complete fossil pan-trionychid skeletons so far known.

Simplified Pan-species Real-time PCR-based Detection of Plasmodium Spp. in Blood Smear

Directory of Open Access Journals (Sweden)

Gholamreza HASSANPOUR

2016-12-01

Full Text Available Background: We aimed to quicken and simplify the detection of Plasmodium in blood samples by developing and testing a pan-Plasmodium real-time PCR for accurate screening of individuals suspected of malaria.Methods: A single primer/probe set for pan-species Plasmodium-specific real time PCR targeting a conserved region of the small subunit 18S ribosomal DNA was designed and evaluated for rapid diagnosis and screening of malaria infections using dried blood smears. FTA cards were used for rapid and simple DNA extraction.Results: The primers and probes showed a positive response with the DNA extracted from bloods infected with P. falciparum and P. vivax but not with DNA extracted from various smears from uninfected blood samples. Seven positive cases positive by both microscopy and nested PCR were found among 280 blood samples taken from in South and Southeast Iran. Five samples were identified as positive for P. vivax and two as positive for P. falciparum. All positive samples were positive by real-time PCR. Furthermore, all 38-blood samples positive by microscopy were positive by real-time PCR. No microscopy-negative samples were positive by real-time PCR.Conclusion: By using a simple FTA card for DNA extraction and by application of the real-time PCR developed in this study, sensitivity similar to nested-PCR and microscopy was achieved. This format simplifies the detection of Plasmodium in large numbers of samples.

Stability of the Gel Electrolyte PAN : EC : PC : LICF3SO3 towards Lithium

DEFF Research Database (Denmark)

Perera, Kumudu; Dissanayake, M.A.K.L.; Skaarup, Steen

2006-01-01

The stability of the gel electrolyte consisting of polyacrylonitrile (PAN), ethylene carbonate (EC), propylene carbonate (PC) and lithium trifluoromethanesulfonate (LiCF3SO3 – LiTF) towards metallic lithium was investigated using the time evolution of impedance plots. Symmetric cells of the form Li...... / PAN : EC : PC: LiTF / Li were assembled and impedance data were collected at room temperature for one week. A clear indication of growth of a resistive layer could be seen. The electrolyte resistance remained constant. The growth of the passivation layer became constant after first two days...

Prostatic fossa calculus | El Abiad | Pan African Medical Journal

African Journals Online (AJOL)

Pan African Medical Journal. Journal Home · ABOUT · Advanced Search · Current Issue · Archives · Journal Home > Vol 21, No 1 (2015) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register · Download this PDF file. The PDF file you selected should load here if your ...

Women in Science and Technology at PAN-IIT Chennai

Indian Academy of Sciences (India)

We plan to have a one day conference on 'Women in Science and Technology' at the PAN-IIT convention to be held at IIT. Madras on December 20th, 2008. This conference intends to address the issue of the serious underrepresentation of women at all levels of science and technology education and research. Given this ...

Impact of dynamic vegetation phenology on the simulated pan-Arctic land surface state

Science.gov (United States)

Teufel, Bernardo; Sushama, Laxmi; Arora, Vivek K.; Verseghy, Diana

2018-03-01

The pan-Arctic land surface is undergoing rapid changes in a warming climate, with near-surface permafrost projected to degrade significantly during the twenty-first century. Vegetation-related feedbacks have the potential to influence the rate of degradation of permafrost. In this study, the impact of dynamic phenology on the pan-Arctic land surface state, particularly near-surface permafrost, for the 1961-2100 period, is assessed by comparing two simulations of the Canadian Land Surface Scheme (CLASS)—one with dynamic phenology, modelled using the Canadian Terrestrial Ecosystem Model (CTEM), and the other with prescribed phenology. These simulations are forced by atmospheric data from a transient climate change simulation of the 5th generation Canadian Regional Climate Model (CRCM5) for the Representative Concentration Pathway 8.5 (RCP8.5). Comparison of the CLASS coupled to CTEM simulation to available observational estimates of plant area index, spatial distribution of permafrost and active layer thickness suggests that the model captures reasonably well the overall distribution of vegetation and permafrost. It is shown that the most important impact of dynamic phenology on the land surface occurs through albedo and it is demonstrated for the first time that vegetation control on albedo during late spring and early summer has the highest potential to impact the degradation of permafrost. While both simulations show extensive near-surface permafrost degradation by the end of the twenty-first century, the strong projected response of vegetation to climate warming and increasing CO2 concentrations in the coupled simulation results in accelerated permafrost degradation in the northernmost continuous permafrost regions.

Hidden Lineage Complexity of Glycan-Dependent HIV-1 Broadly Neutralizing Antibodies Uncovered by Digital Panning and Native-Like gp140 Trimer

Directory of Open Access Journals (Sweden)

Linling He

2017-08-01

Full Text Available Germline precursors and intermediates of broadly neutralizing antibodies (bNAbs are essential to the understanding of humoral response to HIV-1 infection and B-cell lineage vaccine design. Using a native-like gp140 trimer probe, we examined antibody libraries constructed from donor-17, the source of glycan-dependent PGT121-class bNAbs recognizing the N332 supersite on the HIV-1 envelope glycoprotein. To facilitate this analysis, a digital panning method was devised that combines biopanning of phage-displayed antibody libraries, 900 bp long-read next-generation sequencing, and heavy/light (H/L-paired antibodyomics. In addition to single-chain variable fragments resembling the wild-type bNAbs, digital panning identified variants of PGT124 (a member of the PGT121 class with a unique insertion in the heavy chain complementarity-determining region 1, as well as intermediates of PGT124 exhibiting notable affinity for the native-like trimer and broad HIV-1 neutralization. In a competition assay, these bNAb intermediates could effectively compete with mouse sera induced by a scaffolded BG505 gp140.681 trimer for the N332 supersite. Our study thus reveals previously unrecognized lineage complexity of the PGT121-class bNAbs and provides an array of library-derived bNAb intermediates for evaluation of immunogens containing the N332 supersite. Digital panning may prove to be a valuable tool in future studies of bNAb diversity and lineage development.

Hidden Lineage Complexity of Glycan-Dependent HIV-1 Broadly Neutralizing Antibodies Uncovered by Digital Panning and Native-Like gp140 Trimer.

Science.gov (United States)

He, Linling; Lin, Xiaohe; de Val, Natalia; Saye-Francisco, Karen L; Mann, Colin J; Augst, Ryan; Morris, Charles D; Azadnia, Parisa; Zhou, Bin; Sok, Devin; Ozorowski, Gabriel; Ward, Andrew B; Burton, Dennis R; Zhu, Jiang

2017-01-01

Germline precursors and intermediates of broadly neutralizing antibodies (bNAbs) are essential to the understanding of humoral response to HIV-1 infection and B-cell lineage vaccine design. Using a native-like gp140 trimer probe, we examined antibody libraries constructed from donor-17, the source of glycan-dependent PGT121-class bNAbs recognizing the N332 supersite on the HIV-1 envelope glycoprotein. To facilitate this analysis, a digital panning method was devised that combines biopanning of phage-displayed antibody libraries, 900 bp long-read next-generation sequencing, and heavy/light (H/L)-paired antibodyomics. In addition to single-chain variable fragments resembling the wild-type bNAbs, digital panning identified variants of PGT124 (a member of the PGT121 class) with a unique insertion in the heavy chain complementarity-determining region 1, as well as intermediates of PGT124 exhibiting notable affinity for the native-like trimer and broad HIV-1 neutralization. In a competition assay, these bNAb intermediates could effectively compete with mouse sera induced by a scaffolded BG505 gp140.681 trimer for the N332 supersite. Our study thus reveals previously unrecognized lineage complexity of the PGT121-class bNAbs and provides an array of library-derived bNAb intermediates for evaluation of immunogens containing the N332 supersite. Digital panning may prove to be a valuable tool in future studies of bNAb diversity and lineage development.

Phase 2 report on the evaluation of polyacrylonitrile (PAN) as a binding polymer for absorbers used to treat liquid radioactive wastes

International Nuclear Information System (INIS)

Sebesta, F.; John, J.; Motl, A.

1996-05-01

The performance of PAN-based composite absorbers was evaluated in dynamic experiments at flow rates ranging from 25--100 bed volumes (BV) per hour. Composite absorbers with active components of ammonium molybdophosphate (AMP) PAN and K-Co ferrocyanide (KCoFC) PAN were used for separating Cs from a 1 M HNO 3 + 1 M NaNO 3 + 2 x 10 -5 M CsCl acidic simulant solution. KCoFC-PAN and two other FC-based composite absorbers were tested for separating Cs from alkaline simulant solutions containing 0.01 M to 1 M NaOH and 1 M NaNO 3 + x x 10 -4 M CsCl. The efficiency of the Cs sorption on the AMP-PAN absorber from acidic simulant solutions was negatively influenced by the dissolution of the AMP active component. At flow rates of 50 BV/hr, the decontamination factor of about 10 3 could be maintained for treatment of 380 BV of the feed. With the KCoFC-PAN absorber, the decontamination factor of about 10 3 could be maintained for a feed volume as great as 1,800 BV. In alkaline simulant solutions, significant decomposition of the active components was observed, and the best performance was exhibited by the KCoFC-PAN absorber. Introductory experiments confirmed that Cs may be washed out of the composite absorbers. Regeneration of both absorbers for repetitive use was also found to be possible. The main result of the study is that PAN was proven to be a versatile polymer capable of forming porous composite absorbers with a large number of primary absorbers. The composite absorbers proved to be capable of withstanding the harsh acidic and alkaline conditions and significant radiation doses that may be expected in the treatment of US DOE wastes. A field demonstration is proposed as a follow-on activity

Monitoring implementation of city development strategy: The case study of Pančevo

Directory of Open Access Journals (Sweden)

Mikavica Mihailo

2017-01-01

Full Text Available This paper is the result of the research project carried out as part of the Master program Integral Urbanism at Faculty of Architecture, University of Belgrade. The main focus of master's thesis was 'Instruments for Governing Integral Urban Development'. In year 2016, polygon used to create a master projects was the territory of the City of Pančevo, a development framework was: 'City Development Strategy of Pančevo for the Period 2014-2020'. Considering issues and potential improvement opportunities of the city, after research and analysis, we have chosen the research theme 'Implementation Monitoring of City Development Strategy - The Case Study of Pančevo'. The paper outlines the broader framework of urban development management to understand the implementation of new instruments of urban governance in local context of the City of Pančevo. The focus is on instruments that improve process of the monitoring of implementation of local development strategies - human resources, financing, institutionalization and participation. The results of this master project relate to the proposals for improving monitoring of the implementation strategy, including the manner and structure of reporting, establishing a team to implement the strategy as a permanent body, linking funding strategy with the program budget of the city and improving public participation and transparency in decision-making in the process of implementing the strategy. Results are derived from the research presented in this paper, and listed for better overview and operationalization issues in a local context. The focus of this work is on understanding the capacity of institutionalization of changes in the domain of urban governance in the local context in Serbia.

A Pan-STARRS1 VIEW OF THE BIFURCATED SAGITTARIUS STREAM

International Nuclear Information System (INIS)

Slater, C. T.; Bell, E. F.; Schlafly, E. F.; Jurić, M.; Finkbeiner, D. P.; Martin, N. F.; Rix, H.-W.; Goldman, B.; Morganson, E. P.; Bernard, E. J.; Burgett, W. S.; Chambers, K. C.; Kaiser, N.; Magnier, E. A.; Tonry, J. L.; Price, P. A.

2013-01-01

We use data from the Pan-STARRS1 survey to present a panoramic view of the Sagittarius tidal stream in the southern Galactic hemisphere. As a result of the extensive sky coverage of Pan-STARRS1, the southern stream is visible along more than 60° of its orbit, nearly double the length seen by the Sloan Digital Sky Survey. The recently discovered southern bifurcation of the stream is also apparent, with the fainter branch of the stream visible over at least 30°. Using a combination of fitting both the main-sequence turnoff and the red clump, we measure the distance to both arms of the stream in the south. We find that the distances to the bright arm of the stream agree very well with the N-body models of Law and Majewski. We also find that the faint arm lies ∼5 kpc closer to the Sun than the bright arm, similar to the behavior seen in the northern hemisphere.

Historical satellite data used to map Pan-Amazon forest cover

Science.gov (United States)

Kalluri, Satya; Desch, Arthur; Curry, Troy; Altstatt, Alice; Devers, Didier; Townshend, John; Tucker, Compton

Deforestation in the Brazilian Amazon is well documented and the contributions of Brazilian deforestation to global change have been extensively discussed in both scientific and popular literature [e.g., Skole and Tucker, 1993]. However, deforestation within the non-Brazilian tropics of South America has received much less attention. The Pan-Amazon region covering Venezuela, Colombia, Ecuador, Peru, and Bolivia comprises ˜2 million km2 of tropical forest that is under increasing pressure from logging and development. Wall-to-wall high-resolution forest cover maps are needed to properly document the complex distribution patterns of deforestation in the Pan-Amazon [Tucker and Townshend, 2000]. The Deforestation Mapping Group at the University of Marylands Global Land Cover Facility is using Landsat data to generate tropical forest cover maps in this region (Figure l). The study shows that while rates of forest loss are generally lower than those in Brazil, there are hot spots where deforestation rates run as high as 2,200 km2 yr1.

Experience from a pilot based system for ATLAS

International Nuclear Information System (INIS)

Nilsson, P

2008-01-01

The PanDA software provides a highly performing distributed production and distributed analysis system. It is the first system in the ATLAS experiment to use a pilot based late job delivery technique. This paper describes the architecture of the pilot system used in PanDA. Unique features have been implemented for high reliability automation in a distributed environment. Performance of PanDA is analyzed from one and a half years of experience of performing distributed computing on the Open Science Grid (OSG) infrastructure. Experience with pilot delivery mechanism using Condor-G, and a glide-in factory developed under OSG will be described

Pan-genome analysis of Aeromonas hydrophila, Aeromonas veronii and Aeromonas caviae indicates phylogenomic diversity and greater pathogenic potential for Aeromonas hydrophila.

Science.gov (United States)

Ghatak, Sandeep; Blom, Jochen; Das, Samir; Sanjukta, Rajkumari; Puro, Kekungu; Mawlong, Michael; Shakuntala, Ingudam; Sen, Arnab; Goesmann, Alexander; Kumar, Ashok; Ngachan, S V

2016-07-01

Aeromonas species are important pathogens of fishes and aquatic animals capable of infecting humans and other animals via food. Due to the paucity of pan-genomic studies on aeromonads, the present study was undertaken to analyse the pan-genome of three clinically important Aeromonas species (A. hydrophila, A. veronii, A. caviae). Results of pan-genome analysis revealed an open pan-genome for all three species with pan-genome sizes of 9181, 7214 and 6884 genes for A. hydrophila, A. veronii and A. caviae, respectively. Core-genome: pan-genome ratio (RCP) indicated greater genomic diversity for A. hydrophila and interestingly RCP emerged as an effective indicator to gauge genomic diversity which could possibly be extended to other organisms too. Phylogenomic network analysis highlighted the influence of homologous recombination and lateral gene transfer in the evolution of Aeromonas spp. Prediction of virulence factors indicated no significant difference among the three species though analysis of pathogenic potential and acquired antimicrobial resistance genes revealed greater hazards from A. hydrophila. In conclusion, the present study highlighted the usefulness of whole genome analyses to infer evolutionary cues for Aeromonas species which indicated considerable phylogenomic diversity for A. hydrophila and hitherto unknown genomic evidence for pathogenic potential of A. hydrophila compared to A. veronii and A. caviae.

Radiological Protection Measurements Implemented during the 16. Pan American and 4. ParaPan American Games: Guadalajara, Mexico, 2011; Medidas de seguridad radiologica implementadas durante los 16. Juegos Panamericanos y 4. Juegos Parapanamericanos: Guadalajara, Mexico, 2011

Energy Technology Data Exchange (ETDEWEB)

NONE

2014-02-15

Terrorism remains a threat to international stability and security. Often national and international high level public events are the subject of much public interest and receive extensive coverage in the media. In this sense, it is well known that there is a real threat of a terrorist attack in important public events, such as major economic summits, high level political meetings or sporting events. In 1955 and 1975, the 2nd and 7th Pan American Games were organized by the City of Mexico. In 2011, the Pan American Games was the third event of its kind held in Guadalajara, Jalisco. At the national level, the implementation of nuclear security measures in the Pan American Games laid the foundations for a sustainable national nuclear security framework that will continue long after the event. The political decision, the existing legal basis and structure, agency coordination facilitated the incorporation of nuclear security measures. It was also a challenge to integrate all the relevant organizations, provide focus to the threat of terrorism linked to weapons of mass destruction for security games, plan resources and execute the project on time, among other details. For this reason, information and lessons learned that are reported in this document, received in Mexico during the 16th edition of the Pan American Games will be useful for the implementation of nuclear security measures in States with similar situations.

EURATOM achievements and challenges in facilitating Pan-European infrastructure collaborative efforts

International Nuclear Information System (INIS)

Garbil, Roger

2017-01-01

The European Atomic Energy Community (Euratom) Research and Training framework programmes are benefiting from a consistent success in pursuing excellence in research and facilitating Pan European collaborative efforts across a broad range of nuclear science and technologies, nuclear fission and radiation protection. To fulfil Euratom R and D programmes keys objectives of maintaining high levels of nuclear knowledge and building a more dynamic and competitive European industry, promotion of Pan-European mobility of researchers are implemented by co-financing transnational access to research infrastructures (RIs) and joint research activities. 'Euratom Achievements and Challenges' show the benefits of research efforts in key fields, of building an effective 'critical mass', of promoting the creation of 'centres of excellence' with an increased support for 'open access to key research infrastructures', exploitation of research results, management of knowledge, dissemination and sharing of learning outcomes.

An integrated pan-tropical biomass map using multiple reference datasets

NARCIS (Netherlands)

Avitabile, V.; Herold, M.; Heuvelink, G.B.M.; Lewis, S.L.; Phillips, O.L.; Asner, G.P.; Armston, J.; Asthon, P.; Banin, L.F.; Bayol, N.; Berry, N.; Boeckx, P.; Jong, De B.; Devries, B.; Girardin, C.; Kearsley, E.; Lindsell, J.A.; Lopez-gonzalez, G.; Lucas, R.; Malhi, Y.; Morel, A.; Mitchard, E.; Nagy, L.; Qie, L.; Quinones, M.; Ryan, C.M.; Slik, F.; Sunderland, T.; Vaglio Laurin, G.; Valentini, R.; Verbeeck, H.; Wijaya, A.; Willcock, S.

2016-01-01

We combined two existing datasets of vegetation aboveground biomass (AGB) (Proceedings of the National Academy of Sciences of the United States of America, 108, 2011, 9899; Nature Climate Change, 2, 2012, 182) into a pan-tropical AGB map at 1-km resolution using an independent reference dataset of

Potential sea salt aerosol sources from frost flowers in the pan-Arctic region

Energy Technology Data Exchange (ETDEWEB)

Xu, Li [Scripps Institution of Oceanography, University of California, San Diego, La Jolla California USA; Now at Department of Earth System Science, University of California, Irvine California USA; Russell, Lynn M. [Scripps Institution of Oceanography, University of California, San Diego, La Jolla California USA; Burrows, Susannah M. [Atmospheric Science and Global Change Division, Pacific Northwest National Laboratory, Richland Washington USA

2016-09-23

In order to better represent observed wintertime aerosol concentrations at Barrow, Alaska, we implemented an observationally-based parameterization for estimating sea salt production from frost flowers in the Community Earth System Model (CESM). In this work, we evaluate the potential influence of this sea salt source on the pan-Arctic (60ºN-90ºN) climate. Results show that frost flower salt emissions substantially increase the modeled surface sea salt aerosol concentration in the winter months when new sea ice and frost flowers are present. The parameterization reproduces both the magnitude and seasonal variation of the observed submicron sea salt aerosol concentration at surface in Barrow during winter much better than the standard CESM simulation without a frost-flower salt particle source. Adding these frost flower salt particle emissions increases aerosol optical depth by 10% and results in a small cooling at surface. The increase in salt particle mass concentrations of a factor of 8 provides nearly two times the cloud condensation nuclei concentration, as well as 10% increases in cloud droplet number and 40% increases in liquid water content near coastal regions adjacent to continents. These cloud changes reduce longwave cloud forcing by 3% and cause a small surface warming, increasing the downward longwave flux at the surface by 2 W m-2 in the pan-Arctic under the present-day climate.

Heritage Conservation and Urban Landscaping of Ancient Pan Pool Neighborhood, Qufu: a Historical and Indigenous Perspective

Directory of Open Access Journals (Sweden)

Yingchun Zhang

2014-12-01

Full Text Available Gu Pan Pool neighborhood got its name because of Gu Pan Chi, (古泮池，the ancient Pan Pool, located in the southeastern part of Confucius’ birthplace, Qufu, the birth place of Confucius with a history of 3000 year. Gu Pan Pool has been recently under preservation with the joint efforts of World Bank cultural heritage conservation project and the local municipal government. With disparate interests in mind, the three stakeholders of heritage, the world bank, Qufu municipal government and local residents are contradictory with each other in the regeneration process, in which the local voices are often ignored. The purpose of this paper is to rethink heritage making from a historical and indigenous perspective in the contemporary Chinese urban historic landscape planning process. The author contends that the cultural value and pluralism embedded in the ritual way of thinking in Chinese Classics inherited and transmitted for thousands of years could be an alternative way of thinking for the landscape planning practices in the homogenizing culture of global capitalism. This research aims to reinterpret and re-activate Confucianism as cultural heritage to enrich the understanding and hence the sustainability related to human action in urban spaces with emphasis on planning processes in contemporary China.

Effect of Electrostatic Tactile Feedback on Accuracy and Efficiency of Pan Gestures on Touch Screens.

Science.gov (United States)

Liu, Guohong; Sun, Xiaoying; Wang, Dangxiao; Liu, Yue; Zhang, Yuru

2018-01-01

Recently, many studies examined electrostatic tactile feedback on touch screens to enrich interaction experience. However, it is unclear as to whether added tactile feedback during a sliding process increases the accuracy of pan gestures with velocity constraints. In this study, a custom-designed electrostatic tactile display was considered. Initially, the accuracy and efficiency of pan gestures were compared under two conditions, namely with and without electrostatic tactile feedback. This was followed by exploring the evolution of completion time (CT) with different indices of difficulties (ID). Experimental results with 12 participants indicated that the accuracy and completion time of pan gestures with added tactile feedback significantly exceeded those without tactile feedback. Furthermore, the relationship between CT and ID satisfied Fitts' Law with a correlation coefficient exceeding 0.9. Based on the findings, a "Tactile Fruit Sorting" game was designed, and subjective and objective evaluations were conducted. The results confirmed that the added tactile feedback enhanced both user performance and interest with respect to the game.

Trends in Dengue Cases Imported into the United States from Pan America 2001–2012

Directory of Open Access Journals (Sweden)

Caitlin A.M. Van Dodewaard

2015-01-01

Full Text Available The objective of this study was to improve risk assessments of travel on dengue (DEN virus (DENV distribution. We investigated the exposure risk of US citizens traveling to DEN-endemic Pan American countries. The number of DEN cases reported in 51 Pan American countries from 2001 to 2012 was compared to the population of the same countries. The number of US travelers visiting the Pan American countries was categorized by region, and travel-related DEN infections were analyzed. US residents visiting the Dominican Republic exhibited the highest traveler-related DEN incidence. Brazil showed the most DEN cases in its residents (≫1 million reported cases in 2010. The number of DEN cases continues to rise as does international travel and the geographic range of potential DENV vectors. DENV risk assessments may be improved by analyzing the possible routes of entry. Underreporting remains an issue for calculating DENV transmission risk by country and region.

Body composition in Pan paniscus compared with Homo sapiens has implications for changes during human evolution.

Science.gov (United States)

Zihlman, Adrienne L; Bolter, Debra R

2015-06-16

The human body has been shaped by natural selection during the past 4-5 million years. Fossils preserve bones and teeth but lack muscle, skin, fat, and organs. To understand the evolution of the human form, information about both soft and hard tissues of our ancestors is needed. Our closest living relatives of the genus Pan provide the best comparative model to those ancestors. Here, we present data on the body composition of 13 bonobos (Pan paniscus) measured during anatomical dissections and compare the data with Homo sapiens. These comparative data suggest that both females and males (i) increased body fat, (ii) decreased relative muscle mass, (iii) redistributed muscle mass to lower limbs, and (iv) decreased relative mass of skin during human evolution. Comparison of soft tissues between Pan and Homo provides new insights into the function and evolution of body composition.

Pan-European stochastic flood event set

Science.gov (United States)

Kadlec, Martin; Pinto, Joaquim G.; He, Yi; Punčochář, Petr; Kelemen, Fanni D.; Manful, Desmond; Palán, Ladislav

2017-04-01

Impact Forecasting (IF), the model development center of Aon Benfield, has been developing a large suite of catastrophe flood models on probabilistic bases for individual countries in Europe. Such natural catastrophes do not follow national boundaries: for example, the major flood in 2016 was responsible for the Europe's largest insured loss of USD3.4bn and affected Germany, France, Belgium, Austria and parts of several other countries. Reflecting such needs, IF initiated a pan-European flood event set development which combines cross-country exposures with country based loss distributions to provide more insightful data to re/insurers. Because the observed discharge data are not available across the whole Europe in sufficient quantity and quality to permit a detailed loss evaluation purposes, a top-down approach was chosen. This approach is based on simulating precipitation from a GCM/RCM model chain followed by a calculation of discharges using rainfall-runoff modelling. IF set up this project in a close collaboration with Karlsruhe Institute of Technology (KIT) regarding the precipitation estimates and with University of East Anglia (UEA) in terms of the rainfall-runoff modelling. KIT's main objective is to provide high resolution daily historical and stochastic time series of key meteorological variables. A purely dynamical downscaling approach with the regional climate model COSMO-CLM (CCLM) is used to generate the historical time series, using re-analysis data as boundary conditions. The resulting time series are validated against the gridded observational dataset E-OBS, and different bias-correction methods are employed. The generation of the stochastic time series requires transfer functions between large-scale atmospheric variables and regional temperature and precipitation fields. These transfer functions are developed for the historical time series using reanalysis data as predictors and bias-corrected CCLM simulated precipitation and temperature as

Pambzuka News : building a progressive pan-Africa movement

OpenAIRE

Manji, Firoze

2008-01-01

Pambzuka News is described variously as an e-newsletter or platform of website about social justice in Africa. There are some that see it as an example innovative use of information communications technology. Yet it is both all of these and none of them. Pambzuka News is an attempt to nurture and encourage the building of a progressive pan Africa movement within Africa and amongst what is popularly described as the African diaspora.

Structural, vibrational, elastic and topological properties of PaN under pressure

DEFF Research Database (Denmark)

Modak, P.; K. Verma, Ashok; Svane, A.

2013-01-01

Electronic, structural, vibrational and elastic properties of PaN have been studied both at ambient and high pressures, using first principles methods with several commonly used parameterizations of the exchange-correlation energy. The generalized gradient approximation (GGA) reproduces the groun...

Report of the 10th Biennial conference of Pan African Pediatric ...

African Journals Online (AJOL)

Keywords: congress, Egyptian Pediatric Surgical Association, Pan African. Pediatric Surgical Association, report. Department of Surgery, Pediatric surgery unit, Faculty of Medicine, Tanta. University, Tanta, Egypt. Correspondence to Essam Elhalaby, MD, Division of Pediatric Surgery,. Faculty of Medicine, Tanta University, ...

PanMetaDocs - A tool for collecting and managing the long tail of "small science data"

Science.gov (United States)

Klump, J.; Ulbricht, D.

2011-12-01

In the early days of thinking about cyberinfrastructure the focus was on "big science data". Today, the challenge is not anymore to store several terabytes of data, but to manage data objects in a way that facilitates their re-use. Key to re-use by a user as a data consumer is proper documentation of the data. Also, data consumers need discovery metadata to find the data they need and they need descriptive metadata to be able to use the data they retrieved. Thus, data documentation faces the challenge to extensively and completely describe these objects, hold the items easily accessible at a sustainable cost level. However, data curation and documentation do not rank high in the everyday work of a scientist as a data producer. Data producers are often frustrated by being asked to provide metadata on their data over and over again, information that seemed very obvious from the context of their work. A challenge to data archives is the wide variety of metadata schemata in use, which creates a number of maintenance and design challenges of its own. PanMetaDocs addresses these issues by allowing an uploaded files to be described by more than one metadata object. PanMetaDocs, which was developed from PanMetaWorks, is a PHP based web application that allow to describe data with any xml-based metadata schema. Its user interface is browser based and was developed to collect metadata and data in collaborative scientific projects situated at one or more institutions. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. In the development of PanMetaDocs the business logic of panMetaWorks is reused, except for the authentication and data management functions of PanMetaWorks, which are delegated to the eSciDoc framework. The eSciDoc repository framework is designed as a service oriented architecture that can be controlled through a

PanCanadian Energy Corporation 2001 progress report : Voluntary challenge and registry Inc

International Nuclear Information System (INIS)

2001-10-01

With extensive exploration and production activities stretching across Canada and reaching into the Gulf of Mexico, PanCanadian Energy Corporation is one of Canada's largest producers and marketers of crude oil, natural gas and natural gas liquids. PanCanadian is a committed supporter of the Climate Change Voluntary Challenge and Registry (VCR) program, whose aim is the reduction of greenhouse gas emissions. Through geological sequestration, improved operational efficiencies, research, public policy input, employee education, and regular reporting to external stakeholders, PanCanadian remains committed to greenhouse gas management. To date, the reductions amount to 2.5 million tonnes per year plus 103,000 net tonnes injected into the Weyburn project during 2000. The start-up of the Weyburn carbon dioxide injection project was the major focus of the efforts in 2000, along with improvements in the measurement processes used to prepare the reports. Assistance in the formulation of provincial and national strategies was provided. In section 1 of the document, a statement concerning senior management support was provided, and section 2 detailed the base year quantification. In section 3, the projection was discussed, followed by the targets in section 4. The measures to achieve targets were reviewed in section 5, and the results achieved were examined in section 6. Education, training and awareness were dealt with in section 7. 8 tabs., 3 figs

Twin-cuvette measurement technique for investigation of dry deposition of O3 and PAN to plant leaves under controlled humidity conditions

Directory of Open Access Journals (Sweden)

S. Sun

2016-02-01

with Quercus ilex was investigated over a 14 day measurement period under controlled climate chamber conditions. By using O3 mixing ratios between 32 and 105 ppb and PAN mixing ratios between 100 and 350 ppt, a linear dependency of the O3 flux as well as the PAN flux in relation to its ambient mixing ratio could be observed. At relative humidity (RH of 40 %, the deposition velocity ratio of O3 and PAN was determined to be 0.45. At that humidity, the deposition of O3 to the plant leaves was found to be only controlled by the leaf stomata. For PAN, an additional resistance inhibited the uptake of PAN by the leaves. Furthermore, the formation of water films on the leaf surface of plants inside the chamber could be continuously tracked with our custom built leaf wetness sensors. Using this modified leaf wetness sensor measuring the electrical surface conductance on the leaves, an exponential relationship between the ambient humidity and the electrical surface conductance could be determined.

Public information use in chimpanzees (Pan troglodytes) and children (Homo sapiens)

DEFF Research Database (Denmark)

Vale, Gill L; Flynn, Emma G; Lambeth, Susan P

2014-01-01

The discernment of resource quality is pertinent to many daily decisions faced by animals. Public information is a critical information source that promotes quality assessments, attained by monitoring others' performance. Here we provide the first evidence, to our knowledge, that chimpanzees (Pan...

Geology of the Pan-African basement Complex in Ube-Wulko area ...

African Journals Online (AJOL)

The Ube-Wulko area of southeast Akwanga falls within the Pan-African remobilized Basement Complex of northcentral Nigeria. It consists of intensely multi-deformed high grade polymetamorphic basement rocks, predominantly composed of migmatitic gneisses and schists and subordinate quartzites, marbles, and ...

Gastrointestinal Parasites of Savanna Chimpanzees (Pan troglodytes schweinfurthii) in Ugalla, Tanzania

Czech Academy of Sciences Publication Activity Database

Kalousová, B.; Piel, A. K.; Pomajbíková, Kateřina; Modrý, David; Stewart, F.A.; Petrželková, Klára Judita

2014-01-01

Roč. 35, č. 2 (2014), s. 463-475 ISSN 0164-0291 Institutional support: RVO:60077344 Keywords : hominoid * Pan troglodytes schweinfurthii * gastrointestinal parasites * savanna * Spirurids * transmission * Ugalla * Tanzania Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.993, year: 2014

EURATOM achievements and challenges in facilitating Pan-European infrastructure collaborative efforts

Energy Technology Data Exchange (ETDEWEB)

Garbil, Roger [European Commission, Brussels (Belgium). DG Research and Innovation, Euratom Fission

2017-10-15

The European Atomic Energy Community (Euratom) Research and Training framework programmes are benefiting from a consistent success in pursuing excellence in research and facilitating Pan European collaborative efforts across a broad range of nuclear science and technologies, nuclear fission and radiation protection. To fulfil Euratom R and D programmes keys objectives of maintaining high levels of nuclear knowledge and building a more dynamic and competitive European industry, promotion of Pan-European mobility of researchers are implemented by co-financing transnational access to research infrastructures (RIs) and joint research activities. 'Euratom Achievements and Challenges' show the benefits of research efforts in key fields, of building an effective 'critical mass', of promoting the creation of 'centres of excellence' with an increased support for 'open access to key research infrastructures', exploitation of research results, management of knowledge, dissemination and sharing of learning outcomes.

Breeding of Greater and Lesser Flamingos at Sua Pan, Botswana ...

African Journals Online (AJOL)

to fledging was unknown owing to the rapid drying of the pan in late March 1999. No Greater Flamingo breeding was seen that season. Exceptional flooding during 1999–2000 produced highly favourable breeding conditions, with numbers of Greater and Lesser Flamingos breeding estimated to be 23 869 and 64 287 pairs, ...

Modeling Pan Evaporation for Kuwait by Multiple Linear Regression

Science.gov (United States)

Almedeij, Jaber

2012-01-01

Evaporation is an important parameter for many projects related to hydrology and water resources systems. This paper constitutes the first study conducted in Kuwait to obtain empirical relations for the estimation of daily and monthly pan evaporation as functions of available meteorological data of temperature, relative humidity, and wind speed. The data used here for the modeling are daily measurements of substantial continuity coverage, within a period of 17 years between January 1993 and December 2009, which can be considered representative of the desert climate of the urban zone of the country. Multiple linear regression technique is used with a procedure of variable selection for fitting the best model forms. The correlations of evaporation with temperature and relative humidity are also transformed in order to linearize the existing curvilinear patterns of the data by using power and exponential functions, respectively. The evaporation models suggested with the best variable combinations were shown to produce results that are in a reasonable agreement with observation values. PMID:23226984

Radiochemical neutron activation analysis for trace elements of basic ingredients of pan

International Nuclear Information System (INIS)

Zaidi, J.H.; Arif, M.; Fatima, I; Qureshi, I.H.

2002-01-01

Extensive use of pan, by one-tenth of world's population, entails the evaluation of trace element contents in its ingredients. Radiochemical neutron activation analysis (RNAA) was developed and successfully employed to determine the concentration of 36 trace elements (essential, toxic and nonessential) in its four basic ingredients, leaf of betel pepper, betel nut, catechu and lime. The radiochemical separation methodology has significantly improved the detection limits of most of these elements due to suppression of Compton background. Base-line values of certain toxic and essential elements in these ingredients is provided. The daily intake of essential and toxic elements through pan was estimated and compared with the recommended values. The cumulative intake of Mn is four times higher than the recommended value and that of toxic elements is well below the tolerance limits. (author)

Statistical evaluation of tablet coating processes: influence of pan design and solvent type

Directory of Open Access Journals (Sweden)

Valdomero Pereira de Melo Junior

2010-12-01

Full Text Available Partially and fully perforated pan coaters are among the most relevant types of equipment currently used in the process of coating tablets. The goal of this study was to assess the performance differences among these types of equipment employing a factorial design. This statistical approach allowed the simultaneous study of the process variables and verification of interactions among them. The study included partially-perforated and fully-perforated pan coaters, aqueous and organic solvents, as well as hypromellose-based immediate-release coating. The dependent variables were process time, energy consumption, mean weight of tablets and process yield. For the tests, placebo tablets with a mean weight of 250 mg were produced, divided into eight lots of two kilograms each and coated in duplicate, using both partially perforated pan and fully perforated pan coaters. The results showed a significant difference between the type of equipment used (partially and fully perforated pan coaters with regard to process time and energy consumption, whereas no significant difference was identified for mean weight of the coated tablets and process yield.Entre os tipos de equipamentos de maior relevância utilizados atualmente no processo de revestimento de comprimidos estão os de tambor parcial e totalmente perfurados. A proposta desse trabalho foi avaliar as diferenças de desempenho entre esses equipamentos empregando projeto fatorial. Essa abordagem estatística possibilitou o estudo simultâneo das variáveis do processo, permitindo verificar interações entre elas. O trabalho incluiu equipamento com tambor parcialmente perfurado e totalmente perfurado, solventes aquoso e orgânico, assim como revestimento de liberação imediata à base de hipromelose. As variáveis dependentes ou respostas foram tempo de processo, consumo de energia, peso médio e rendimento do processo. Para os ensaios, foram produzidos comprimidos de placebo de 250 mg de peso m

Limnological studies on the Pretoria Salt Pan, a hypersaline maar lake

CSIR Research Space (South Africa)

Ashton, PJ

1983-01-01

Full Text Available The Pretoria Salt pan is shallow and alkaline with pronounced mesothermy at a depth of between 0.55 and 0.7 metres. Secchi disc transparencies ranged from 7 to 19 cm. Endorheic or closed drainage basins are widely distributed in many climate...

Herpesvirus pan encodes a functional homologue of BHRF1, the Epstein-Barr virus v-Bcl-2

Directory of Open Access Journals (Sweden)

Williams Tracey

2005-02-01

Full Text Available Abstract Background Epstein-Barr virus (EBV latently infects about 90% of the human population and is associated with benign and malignant diseases of lymphoid and epithelial origin. BHRF1, an early lytic cycle antigen, is an apoptosis suppressing member of the Bcl-2 family. In vitro studies imply that BHRF1 is dispensable for both virus replication and transformation. However, the fact that BHRF1 is highly conserved not only in all EBV isolates studied to date but also in the analogous viruses Herpesvirus papio and Herpesvirus pan that infect baboons and chimpanzees respectively, suggests BHRF1 may play an important role in vivo. Results Herpesvirus papio BHRF1 has been shown to function in an analogous manner to EBV BHRF1 in response to DNA damaging agents in human keratinocytes. In this study we show that the heterologous expression of the previously uncharacterised Herpesvirus pan BHRF1 in the human Burkitt's lymphoma cell line Ramos-BL provides similar anti-apoptotic functions to that of EBV BHRF1 in response to apoptosis triggered by serum withdrawal, etoposide treatment and ultraviolet (UV radiation. We also map the amino acid changes onto the recently solved structure of the EBV BHRF1 and reveal that these changes are unlikely to alter the 3D structure of the protein. Conclusions These findings show that the functional conservation of BHRF1 extends to a lymphoid background, suggesting that the primate virus proteins interact with cellular proteins that are themselves highly conserved across the higher primates. Further weight is added to this suggestion when we show that the difference in amino acid sequences map to regions on the 3D structure of EBV BHRF1 that are unlikely to change the conformation of the protein.

A pan-genomic approach to understand the basis of host adaptation in Achromobacter.

Science.gov (United States)

Jeukens, J; Freschi, L; Vincent, A T; Emond-Rheault, J G; Kukavica-Ibrulj, I; Charette, S J; Levesque, R C

2017-04-05

Over the past decade, there has been a rising interest in Achromobacter sp., an emerging opportunistic pathogen responsible for nosocomial and cystic fibrosis (CF) lung infections. Species of this genus are ubiquitous in the environment, can outcompete resident microbiota, and are resistant to commonly used disinfectants as well as antibiotics. Nevertheless, the Achromobacter genus suffers from difficulties in diagnosis, unresolved taxonomy and limited understanding of how it adapts to the CF lung, not to mention other host environments. The goals of this first genus-wide comparative genomics study were to clarify the taxonomy of this genus and identify genomic features associated with pathogenicity and host adaptation. This was done with a widely applicable approach based on pan-genome analysis. First, using all publicly available genomes, a combination of phylogenetic analysis based on 1,780 conserved genes with average nucleotide identity and accessory genome composition allowed the identification of a largely clinical lineage composed of A. xylosoxidans A insuavis A. dolens and A. ruhlandii. Within this lineage, we identified 35 positively selected genes involved in metabolism, regulation and efflux-mediated antibiotic resistance. Second, resistome analysis showed that this clinical lineage carried additional antibiotic resistance genes compared to other isolates. Finally, we identified putative mobile elements that contribute 53% of the genus's resistome and support horizontal gene transfer between Achromobacter and other ecologically similar genera. This study provides strong phylogenetic and pan-genomic bases to motivate further research on Achromobacter, and contributes to the understanding of opportunistic pathogen evolution. © The Author(s) 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.