Canopy gaps affect long-term patterns of tree growth and mortality in mature and old-growth forests in the Pacific Northwest

Science.gov (United States)

Andrew N. Gray; Thomas A. Spies; Robert J. Pabst

2012-01-01

Canopy gaps created by tree mortality can affect the speed and trajectory of vegetation growth. Species’ population dynamics, and spatial heterogeneity in mature forests. Most studies focus on plant development within gaps, yet gaps also affect the mortality and growth of surrounding trees, which influence shading and root encroachment into gaps and determine whether,...

Residual effects of low oxygen storage of mature green fruit on ripening processes and ester biosynthesis during ripening in bananas

Science.gov (United States)

Mature green banana (Musa sapientum L. cv. Cavendish) fruit were stored in 0.5%, 2 %, or 21% O2 for 7 days at 20 °C before ripening was initiated by ethylene. Residual effects of low O2 storage in mature green fruit on ripening and ester biosynthesis in fruit were investigated during ripening period...

Mechanisms of piñon pine mortality after severe drought: a retrospective study of mature trees.

Science.gov (United States)

Gaylord, Monica L; Kolb, Thomas E; McDowell, Nate G

2015-08-01

Conifers have incurred high mortality during recent global-change-type drought(s) in the western USA. Mechanisms of drought-related tree mortality need to be resolved to support predictions of the impacts of future increases in aridity on vegetation. Hydraulic failure, carbon starvation and lethal biotic agents are three potentially interrelated mechanisms of tree mortality during drought. Our study compared a suite of measurements related to these mechanisms between 49 mature piñon pine (Pinus edulis Engelm.) trees that survived severe drought in 2002 (live trees) and 49 trees that died during the drought (dead trees) over three sites in Arizona and New Mexico. Results were consistent over all sites indicating common mortality mechanisms over a wide region rather than site-specific mechanisms. We found evidence for an interactive role of hydraulic failure, carbon starvation and biotic agents in tree death. For the decade prior to the mortality event, dead trees had twofold greater sapwood cavitation based on frequency of aspirated tracheid pits observed with scanning electron microscopy (SEM), smaller inter-tracheid pit diameter measured by SEM, greater diffusional constraints to photosynthesis based on higher wood δ(13)C, smaller xylem resin ducts, lower radial growth and more bark beetle (Coleoptera: Curculionidae) attacks than live trees. Results suggest that sapwood cavitation, low carbon assimilation and low resin defense predispose piñon pine trees to bark beetle attacks and mortality during severe drought. Our novel approach is an important step forward to yield new insights into how trees die via retrospective analysis. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Utilization of oil palm tree residues to produce bio-oil and bio-char via pyrolysis

International Nuclear Information System (INIS)

Abnisa, Faisal; Arami-Niya, Arash; Wan Daud, W.M.A.; Sahu, J.N.; Noor, I.M.

2013-01-01

Highlights: • About 14.72% of the total landmass in Malaysia was used for oil palm plantations. • Oil palm tree residues were pyrolyzed to produce bio-oil and bio-char. • The process was performed at a temperature of 500 °C and reaction time of 60 min. • Characterization of the products was performed. - Abstract: Oil palm tree residues are a rich biomass resource in Malaysia, and it is therefore very important that they be utilized for more beneficial purposes, particularly in the context of the development of biofuels. This paper described the possibility of utilizing oil palm tree residues as biofuels by producing bio-oil and bio-char via pyrolysis. The process was performed in a fixed-bed reactor at a temperature of 500 °C, a nitrogen flow rate of 2 L/min and a reaction time of 60 min. The physical and chemical properties of the products, which are important for biofuel testing, were then characterized. The results showed that the yields of the bio-oil and bio-char obtained from different residues varied within the ranges of 16.58–43.50 wt% and 28.63–36.75 wt%, respectively. The variations in the yields resulted from differences in the relative amounts of cellulose, hemicellulose, lignin, volatiles, fixed carbon, and ash in the samples. The energy density of the bio-char was found to be higher than that of the bio-oil. The highest energy density of the bio-char was obtained from a palm leaf sample (23.32 MJ/kg), while that of the bio-oil was obtained from a frond sample (15.41 MJ/kg)

Maturation of sugar maple seed

Science.gov (United States)

Clayton M., Jr. Carl; Albert G., Jr. Snow; Albert G. Snow

1971-01-01

The seeds of a sugar maple tree (Acer saccharum Marsh.) do not mature at the same time every year. And different trees mature their seeds at different times. So time of year is not a reliable measure of when seeds are ripe. Better criteria are needed. In recent studies we have found that moisture content and color are the best criteria for judging when sugar maple...

Microbiological parameters and maturity degree during composting of Posidonia oceanica residues mixed with vegetable wastes in semi-arid pedo-climatic condition.

Science.gov (United States)

Saidi, Neyla; Kouki, Soulwene; M'hiri, Fadhel; Jedidi, Naceur; Mahrouk, Meriam; Hassen, Abdennaceur; Ouzari, Hadda

2009-01-01

The aim of this study was to characterize the biological stability and maturity degree of compost during a controlled pile-composting trial of mixed vegetable residues (VR) collected from markets of Tunis City with residues of Posidonia oceanica (PoR), collected from Tunis beaches. The accumulation in beaches (as well as their removal) constitutes a serious environmental problem in all Mediterranean countries particularly in Tunisia. Aerobic-thermophilic composting is the most reasonable way to profit highly-valuable content of organic matter in these wastes for agricultural purposes. The physical, chemical, and biological parameters were monitored during composting over 150 d. The most appropriate parameters were selected to establish the maturity degree. The main result of this research was the deduction of the following maturity criterion: (a) C/N ratio 80%. These five parameters, considered jointly are indicative of a high maturity degree and thus of a high-quality organic amendment which employed in a rational way, may improve soil fertility and soil quality. The mature compost was relatively rich in N (13.0 g/kg), P (4.74 g/kg) and MgO (15.80 g/kg). Thus composting definitively constitutes the most optimal option to exploit these wastes.

Increased needle nitrogen contents did not improve shoot photosynthetic performance of mature nitrogen-poor Scots pine trees

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Lasse Tarvainen

2016-07-01

Full Text Available Numerous studies have shown that temperate and boreal forests are limited by nitrogen (N availability. However, few studies have provided a detailed account of how carbon (C acquisition of such forests reacts to increasing N supply. We combined measurements of needle-scale biochemical photosynthetic capacities and continuous observations of shoot-scale photosynthetic performance from several canopy positions with simple mechanistic modelling to evaluate the photosynthetic responses of mature N-poor boreal Pinus sylvestris to N fertilization. The measurements were carried out in August 2013 on 90-year-old pine trees growing at Rosinedalsheden research site in northern Sweden. In spite of a nearly doubling of needle N content in response to the fertilization, no effect on the long-term shoot-scale C uptake was recorded. This lack of N-effect was due to strong light limitation of photosynthesis in all investigated canopy positions. The effect of greater N availability on needle photosynthetic capacities was also constrained by development of foliar P deficiency following N addition. Thus, P deficiency and accumulation of N in arginine appeared to contribute towards lower shoot-scale nitrogen-use efficiency in the fertilized trees, thereby additionally constraining tree-scale responses to increasing N availability. On the whole our study suggests that the C uptake response of the studied N-poor boreal P. sylvestris stand to enhanced N availability is constrained by the efficiency with which the additional N is utilized. This efficiency, in turn, depends on the ability of the trees to use the greater N availability for additional light capture. For stands that have not reached canopy closure, increase in leaf area following N fertilization would be the most effective way for improving light capture and C uptake while for mature stands an increased leaf area may have a rather limited effect on light capture owing to increased self-shading. This raises

Increased Needle Nitrogen Contents Did Not Improve Shoot Photosynthetic Performance of Mature Nitrogen-Poor Scots Pine Trees.

Science.gov (United States)

Tarvainen, Lasse; Lutz, Martina; Räntfors, Mats; Näsholm, Torgny; Wallin, Göran

2016-01-01

Numerous studies have shown that temperate and boreal forests are limited by nitrogen (N) availability. However, few studies have provided a detailed account of how carbon (C) acquisition of such forests reacts to increasing N supply. We combined measurements of needle-scale biochemical photosynthetic capacities and continuous observations of shoot-scale photosynthetic performance from several canopy positions with simple mechanistic modeling to evaluate the photosynthetic responses of mature N-poor boreal Pinus sylvestris to N fertilization. The measurements were carried out in August 2013 on 90-year-old pine trees growing at Rosinedalsheden research site in northern Sweden. In spite of a nearly doubling of needle N content in response to the fertilization, no effect on the long-term shoot-scale C uptake was recorded. This lack of N-effect was due to strong light limitation of photosynthesis in all investigated canopy positions. The effect of greater N availability on needle photosynthetic capacities was also constrained by development of foliar phosphorus (P) deficiency following N addition. Thus, P deficiency and accumulation of N in arginine appeared to contribute toward lower shoot-scale nitrogen-use efficiency in the fertilized trees, thereby additionally constraining tree-scale responses to increasing N availability. On the whole our study suggests that the C uptake response of the studied N-poor boreal P. sylvestris stand to enhanced N availability is constrained by the efficiency with which the additional N is utilized. This efficiency, in turn, depends on the ability of the trees to use the greater N availability for additional light capture. For stands that have not reached canopy closure, increase in leaf area following N fertilization would be the most effective way for improving light capture and C uptake while for mature stands an increased leaf area may have a rather limited effect on light capture owing to increased self-shading. This raises the

Effect of the rearing tank residue of fish farms on the production of passion fruit tree seedlings

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F. O. R. Silva

2017-03-01

Full Text Available The objective of this study was to evaluate the initial growth of seedlings and biomass production of blue and yellow passion fruit trees (round cultivar produced from residue of the rearing tanks of fish farms. The experiment was conducted in a greenhouse using residue obtained from fish farming tanks. Ravine soil (RS, fish tank residue (FR and Tropstrato (TR were used as substrate. The treatments were: T1 = control consisting of Tropstrato substrate; T2 = 25% FR + 75% RS; T3 = 50% FR + 50% RS; T4 = 25% RS + 75% FR; T5 = 100% FR. A completely randomized block design consisting of 5 treatments, 4 replicates and 11 plants per plot was used. Treatment T5 (100% fish farming residue resulted in the largest average number of leaves, highest dry matter production of the aerial part, and highest dry matter accumulation in the root (P<0.05. The worst results were obtained for the treatment using 25% FR (T2, which resulted in less uniformity of the variables studied. Stem height of the passion fruit tree was greater for the treatments that included FR, with the greatest mean height being observed for T5. In conclusion, the treatment using the residue of fish farming tanks was found to be beneficial to produce yellow passion fruit seedlings (round cultivar, representing a good alternative for the reutilization of this residue.

Tree mortality in mature riparian forest: Implications for Fremont cottonwood conservation in the American southwest

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Andersen, Douglas

2015-01-01

Mature tree mortality rates are poorly documented in desert riparian woodlands. I monitored deaths and calculated annual survivorship probability (Ps) in 2 groups of large (27–114 cm DBH), old (≥40 years old) Fremont cottonwood (Populus fremontii Wats.) in a stand along the free-flowing Yampa River in semiarid northwestern Colorado. Ps = 0.993 year-1 in a group (n = 126) monitored over 2003–2013, whereas Ps = 0.985 year-1 in a group (n = 179) monitored over the same period plus 3 earlier years (2000–2003) that included drought and a defoliating insect outbreak. Assuming Ps was the same for both groups during the 10-year postdrought period, the data indicate that Ps = 0.958 year-1 during the drought. I found no difference in canopy dieback level between male and female survivors. Mortality was equal among size classes, suggesting Ps is independent of age, but published longevity data imply that either Ps eventually declines with age or, as suggested in this study, periods with high Ps are interrupted by episodes of increased mortality. Stochastic population models featuring episodes of low Ps suggest a potential for an abrupt decline in mature tree numbers where recruitment is low. The modeling results have implications for woodland conservation, especially for relictual stands along regulated desert rivers.

Logging Damage to Residual Trees Following Partial Cutting in a Green Ash-Sugarberry Stand in the Mississippi Delta

Science.gov (United States)

James S. Meadows

1993-01-01

Partial cutting in bottomland hardwoods to control stand density and species composition sometimes results in logging damage to the lower bole and/or roots of residual trees. If severe, logging damage may lead to a decline in tree vigor, which may subsequently stimulate the production of epicormic branches, causing a decrease in bole quality and an eventual loss in...

Economic injury levels for Asian citrus psyllid control in process oranges from mature trees with high incidence of huanglongbing.

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Cesar Monzo

Full Text Available The Asian citrus psyllid (ACP, Diaphorina citri Kuwayama, is the key pest of citrus wherever it occurs due to its role as vector of huanglongbing (HLB also known as citrus greening disease. Insecticidal vector control is considered to be the primary strategy for HLB management and is typically intense owing to the severity of this disease. While this approach slows spread and also decreases severity of HLB once the disease is established, economic viability of increasingly frequent sprays is uncertain. Lacking until now were studies evaluating the optimum frequency of insecticide applications to mature trees during the growing season under conditions of high HLB incidence. We related different degrees of insecticide control with ACP abundance and ultimately, with HLB-associated yield losses in two four-year replicated experiments conducted in commercial groves of mature orange trees under high HLB incidence. Decisions on insecticide applications directed at ACP were made by project managers and confined to designated plots according to experimental design. All operational costs as well as production benefits were taken into account for economic analysis. The relationship between management costs, ACP abundance and HLB-associated economic losses based on current prices for process oranges was used to determine the optimum frequency and timing for insecticide applications during the growing season. Trees under the most intensive insecticidal control harbored fewest ACP resulting in greatest yields. The relationship between vector densities and yield loss was significant but differed between the two test orchards, possibly due to varying initial HLB infection levels, ACP populations or cultivar response. Based on these relationships, treatment thresholds during the growing season were obtained as a function of application costs, juice market prices and ACP densities. A conservative threshold for mature trees with high incidence of HLB would help

A SEASONAL COMPARISON OF THE PHYSICAL DAMAGES ON RESIDUAL TREES AND SEEDLINGS DUE TO LOGGING OPERATION USING URUS MIII FOREST SKYLINE IN ARTVIN REGION

OpenAIRE

Habip Eroğlu; Ufuk Özcan Öztürk

2008-01-01

In this paper, the physical damages of logging activities using Urus MIII forest skylines on residual trees and seedlings were evaluated through comparison between harvesting operations took place in winter and summer seasons in Artvin region. In order to achieve our aims, both in winter and summer, 4 representative plots were taken in the harvesting areas using Urus MIII skyline. Physical damages caused by logging to residual trees and seedling were noted. Damage classes for the residual tr...

Residues effects of isoproturon in mature earthworm (Aporrectodea caliginosa) under laboratory conditions.

Science.gov (United States)

Youssef, Yahia; Mosleh, Ismaili

2007-01-01

This study was conducted to investigate the residues of isoproturon and its metabolites, 1-(4-isopropylphenyl)-3-methylurea, 1-(4-isopropylphenyl) urea, and 4-isopropylanilin in soil and mature earthworms under laboratory conditions. Mature earthworms (Aporrectodea caliginosa) were exposed for various durations (7, 15, 30, and 60 days) to soils contaminated with isoproturon concentrations (2, 4, 6, 8, and 10 mg.kg(-1) soil). The decrease in isoproturon concentration in the soil depended on initial concentration it was slower at higher concentrations. The isoproturon and its metabolites accumulated in earthworms it increased during the first 15 days and decreased thereafter. Acute toxicity of isoproturon was determined together with total soluble protein content and glycogen of worms. These parameters were related to isoproturon concentration in soil and earthworms. No lethal effect of isoproturon was observed even at the concentration 1000 mg.kg(-1) soil after 60 days of exposure. A reduction of total soluble protein was observed in all treated worms (maximum 59.54%). This study is suggesting the use of the total soluble protein content and glycogen of earthworms as biomarker of exposure to isoproturon.

Springtime Leaf Development of Mature Sessile Oak Trees as Based on Multi-Seasonal Monitoring Data

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NYITRAI, Balázs

2012-01-01

Full Text Available Based on a four year leaf growth data-set we modelled the thermal time-dependent leafontogeny in upper and lower canopy layers of mature sessile oak trees, in a Quercetum petraeae-cerrisforest stand (NE Hungary. Our regression models revealed no considerable differences between thetiming of leaf unfolding and leaf expansion of different canopy layers. On the other hand seasonalcourse in leaf mass-to-area ratio (LMA indicated that sun leaves needed considerably longer thermaltime to fully develop their anatomical structures compared to shade leaves. LMA of sun leaves washigher during the whole leaf maturation process suggesting that ‘sun’ and ‘shade’ characteristicsdevelop in very early stage of leaf ontogeny. Functioning of photosynthetic apparatus (Fv/Fo in shadeleaves have built up faster and performed better in all developmental stages which could be attributedto two main factors: 1 very early determination of leaf traits as a function of light environment and 2evolving shading effect of upper canopy layer eliminates photoinhibition in lower leaves.

How to make a tree ring: Coupling stem water flow and cambial activity in mature Alpine conifers

Science.gov (United States)

Peters, Richard L.; Frank, David C.; Treydte, Kerstin; Steppe, Kathy; Kahmen, Ansgar; Fonti, Patrick

2017-04-01

Inter-annual tree-ring measurements are used to understand tree-growth responses to climatic variability and reconstruct past climate conditions. In parallel, mechanistic models use experimentally defined plant-atmosphere interactions to explain past growth responses and predict future environmental impact on forest productivity. Yet, substantial inconsistencies within mechanistic model ensembles and mismatches with empirical data indicate that significant progress is still needed to understand the processes occurring at an intra-annual resolution that drive annual growth. However, challenges arise due to i) few datasets describing climatic responses of high-resolution physiological processes over longer time-scales, ii) uncertainties on the main mechanistic process limiting radial stem growth and iii) complex interactions between multiple environmental factors which obscure detection of the main stem growth driver, generating a gap between our understanding of intra- and inter-annual growth mechanisms. We attempt to bridge the gap between inter-annual tree-ring width and sub-daily radial stem-growth and provide a mechanistic perspective on how environmental conditions affect physiological processes that shape tree rings in conifers. We combine sub-hourly sap flow and point dendrometer measurements performed on mature Alpine conifers (Larix decidua) into an individual-based mechanistic tree-growth model to simulate sub-hourly cambial activity. The monitored trees are located along a high elevational transect in the Swiss Alps (Lötschental) to analyse the effect of increasing temperature. The model quantifies internal tree hydraulic pathways that regulate the turgidity within the cambial zone and induce cell enlargement for radial growth. The simulations are validated against intra-annual growth patterns derived from xylogenesis data and anatomical analyses. Our efforts advance the process-based understanding of how climate shapes the annual tree-ring structures

Growth response of Pinus ponderosa seedlings and mature tree branches to acid rain and ozone exposure

International Nuclear Information System (INIS)

Anderson, P.D.; Houpis, J.L.J.; Helms, J.A.

1994-10-01

Forests of the central and southern Sierra Nevada in California have been subjected to chronic damage by ozone and other atmospheric pollutants for the past several decades. Until recently, pollutant exposure of northern Sierra Nevada forests has been mild but increasing population and changes in land use throughout the Sacramento Valley and Sierra Nevada foothills may lead to increased pollutant damage in these forests. Although, better documented in other regions of the United States, little is known regarding the potential for acidic precipitation damage to Sierra Nevada forests. Only recently have studies directed towards understanding the potential interactive effects of ozone and acidic precipitation been undertaken. A key issue in resolving potential regional impacts of pollutants on forests is the extent to which research results can be scaled across genotypes and life-stages. Most of the pollution research to date has been performed using seedlings with varying degrees of genetic control. It is important to determine if the results obtained in such studies can be extrapolated to mature trees and to different genetic sources. In this paper, we present results from a one-year study examining the interactive effects of foliar exposure to acidic rain and ozone on the growth of ponderosa pine (Pinus ponderosa), a conifer known to be sensitive to ozone. The response to pollutants is characterized for both seedlings and mature tree branches of three genotypes grown in a common environment

Improved prediction of hardwood tree biomass derived from wood density estimates and form factors for whole trees

Science.gov (United States)

David W. MacFarlane; Neil R. Ver Planck

2012-01-01

Data from hardwood trees in Michigan were analyzed to investigate how differences in whole-tree form and wood density between trees of different stem diameter relate to residual error in standard-type biomass equations. The results suggested that whole-tree wood density, measured at breast height, explained a significant proportion of residual error in standard-type...

Residues of 14C-chlorpyrifos in coconut by radiotracer techniques

International Nuclear Information System (INIS)

Tejada, A.W.; Calumpang, S.M.F.; Magallona, E.D.

1992-01-01

A coconut tree was root-infused with 5 g a.i. chlorpyrifos (Lorsban plus 1.4 uCi of 14 C-chlorpyrifos. Coconut samples both young and mature, were taken 24 h up to 60 days after root infusion. Analysis of the meat and water was done. The maximum uptake of chlorpyrifos equivalents was on the 13th day after root infusion both in mature and young fruit. The residue in water reached the peak on the 20th day after infusion and declined thereafter. A preharvest interval (PHI) of more than 60 days maybe recommended for safe consumption. The usual practice of storing copra in treated warehouses until it is processed into oil was simulated in the laboratory to determine the residues absorbed on the meat. Forty kg of copra with moisture content of 7-12% were stored in an improvised warehouse, i.e. 1 m x 1.5 m x 1 m wooden box, which was treated with 100 ml 1% a.i. Lorsban 50 WP plus 100 uCi 14 C-chlorpyrifos for protection against insects. Analysis showed that 14 C-chlorpyrifos equivalents ranged from 22.6 mg/kg on the 30th day to 8.2 mg/kg on the 90th day with a 63.7% reduction in residues. Bound residues were detected on samples stored for 60-90 days, with levels of 1.0 to 0.2 ug/g 14 C-chlorpyrifos equivalents. This is within the Maximum Residue Limit of 2 mg/kg set by FAO/WHO for chlorpyrifos in most agricultural commodities. Chlorpyrifos residues were also determined at various stages of refining and processing of crude coconut oil. It was subjected to alkali refining, bleaching and finally steaming. The residues were reduced by as much as 32.7%. (author). 18 refs.; 2 figs.; 3 tabs

Optimizing Biomass Feedstock Logistics for Forest Residue Processing and Transportation on a Tree-Shaped Road Network

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Hee Han

2018-03-01

Full Text Available An important task in forest residue recovery operations is to select the most cost-efficient feedstock logistics system for a given distribution of residue piles, road access, and available machinery. Notable considerations include inaccessibility of treatment units to large chip vans and frequent, long-distance mobilization of forestry equipment required to process dispersed residues. In this study, we present optimized biomass feedstock logistics on a tree-shaped road network that take into account the following options: (1 grinding residues at the site of treatment and forwarding ground residues either directly to bioenergy facility or to a concentration yard where they are transshipped to large chip vans, (2 forwarding residues to a concentration yard where they are stored and ground directly into chip vans, and (3 forwarding residues to a nearby grinder location and forwarding the ground materials. A mixed-integer programming model coupled with a network algorithm was developed to solve the problem. The model was applied to recovery operations on a study site in Colorado, USA, and the optimal solution reduced the cost of logistics up to 11% compared to the conventional system. This is an important result because this cost reduction propagates downstream through the biomass supply chain, reducing production costs for bioenergy and bioproducts.

Residual biomass potential in olive tree cultivation and olive oil industry in Spain: valorization proposal in a biorefinery contex

Energy Technology Data Exchange (ETDEWEB)

Manzanares, P.; Ruiz, E.; Ballesteros, M.; Negro, M.J.; Gallego, F.J.; López-Linares, J.C.; Castro, E.

2017-07-01

Olive crop and olive oil industry generates several residues, i.e., olive tree pruning biomass (OTPB), extracted olive pomace (EOP) and olive leaves (OL) that could be used to produce high-added value products in an integrated biorefinery. OTPB is generated in the field as a result of pruning operation to remove old branches; EOP is the main residue of the pomace olive oil extracting industry after extraction with hexane of residual oil contained in olive pomace; and OL comes from the olive cleaning process carried out at olive mills, where small branches and leaves are separated by density. In this work, an analysis of the potential of OTPB, EOP and OL residues was addressed by estimating the production volumes at national level and the spatial distribution of these residues using geographic information system software. Information provided by public institutions and personal surveys to the industries was evaluated. Moreover, chemical analysis of the residues was undertaken and the results used to make a first assessment of valorization into biofuels such as bioethanol and bio based chemicals. Results show that close to 4.2 million tons/year of EOP, OL and OTPB derived from olive oil industry and olive tree cultivation in Spain could be available as a raw material for biorefineries in Spain. The analysis of the chemical characteristics indicates the relevant potential of these feedstocks for the production of bioethanol and other compounds such as phenols based on suitable processing and conversion routes, although techno-economic evaluations must be tackled to refine this approach.

Residual biomass potential in olive tree cultivation and olive oil industry in Spain: valorization proposal in a biorefinery context

Directory of Open Access Journals (Sweden)

Paloma Manzanares

2017-12-01

Full Text Available Olive crop and olive oil industry generates several residues, i.e., olive tree pruning biomass (OTPB, extracted olive pomace (EOP and olive leaves (OL that could be used to produce high-added value products in an integrated biorefinery. OTPB is generated in the field as a result of pruning operation to remove old branches; EOP is the main residue of the pomace olive oil extracting industry after extraction with hexane of residual oil contained in olive pomace; and OL comes from the olive cleaning process carried out at olive mills, where small branches and leaves are separated by density. In this work, an analysis of the potential of OTPB, EOP and OL residues was addressed by estimating the production volumes at national level and the spatial distribution of these residues using geographic information system software. Information provided by public institutions and personal surveys to the industries was evaluated. Moreover, chemical analysis of the residues was undertaken and the results used to make a first assessment of valorization into biofuels such as bioethanol and bio based chemicals. Results show that close to 4.2 million tons/year of EOP, OL and OTPB derived from olive oil industry and olive tree cultivation in Spain could be available as a raw material for biorefineries in Spain. The analysis of the chemical characteristics indicates the relevant potential of these feedstocks for the production of bioethanol and other compounds such as phenols based on suitable processing and conversion routes, although techno-economic evaluations must be tackled to refine this approach.

Photosynthetic and growth response of sugar maple (Acer saccharum Marsh.) mature trees and seedlings to calcium, magnesium, and nitrogen additions in the Catskill Mountains, NY, USA

Science.gov (United States)

Momen, Bahram; Behling, Shawna J; Lawrence, Gregory B.; Sullivan, Joseph H

2015-01-01

Decline of sugar maple in North American forests has been attributed to changes in soil calcium (Ca) and nitrogen (N) by acidic precipitation. Although N is an essential and usually a limiting factor in forests, atmospheric N deposition may cause N-saturation leading to loss of soil Ca. Such changes can affect carbon gain and growth of sugar maple trees and seedlings. We applied a 22 factorial arrangement of N and dolomitic limestone containing Ca and Magnesium (Mg) to 12 forest plots in the Catskill Mountain region of NY, USA. To quantify the short-term effects, we measured photosynthetic-light responses of sugar maple mature trees and seedlings two or three times during two summers. We estimated maximum net photosynthesis (An-max) and its related light intensity (PAR at An-max), apparent quantum efficiency (Aqe), and light compensation point (LCP). To quantify the long-term effects, we measured basal area of living mature trees before and 4 and 8 years after treatment applications. Soil and foliar chemistry variables were also measured. Dolomitic limestone increased Ca, Mg, and pH in the soil Oe horizon. Mg was increased in the B horizon when comparing the plots receiving N with those receiving CaMg. In mature trees, foliar Ca and Mg concentrations were higher in the CaMg and N+CaMg plots than in the reference or N plots; foliar Ca concentration was higher in the N+CaMg plots compared with the CaMg plots, foliar Mg was higher in the CaMg plots than the N+CaMg plots; An-max was maximized due to N+CaMg treatment; Aqe decreased by N addition; and PAR at An-max increased by N or CaMg treatments alone, but the increase was maximized by their combination. No treatment effect was detected on basal areas of living mature trees four or eight years after treatment applications. In seedlings, An-max was increased by N+CaMg addition. The reference plots had an open herbaceous layer, but the plots receiving N had a dense monoculture of common woodfern in the

Photosynthetic and Growth Response of Sugar Maple (Acer saccharum Marsh.) Mature Trees and Seedlings to Calcium, Magnesium, and Nitrogen Additions in the Catskill Mountains, NY, USA.

Science.gov (United States)

Momen, Bahram; Behling, Shawna J; Lawrence, Greg B; Sullivan, Joseph H

2015-01-01

Decline of sugar maple in North American forests has been attributed to changes in soil calcium (Ca) and nitrogen (N) by acidic precipitation. Although N is an essential and usually a limiting factor in forests, atmospheric N deposition may cause N-saturation leading to loss of soil Ca. Such changes can affect carbon gain and growth of sugar maple trees and seedlings. We applied a 22 factorial arrangement of N and dolomitic limestone containing Ca and Magnesium (Mg) to 12 forest plots in the Catskill Mountain region of NY, USA. To quantify the short-term effects, we measured photosynthetic-light responses of sugar maple mature trees and seedlings two or three times during two summers. We estimated maximum net photosynthesis (An-max) and its related light intensity (PAR at An-max), apparent quantum efficiency (Aqe), and light compensation point (LCP). To quantify the long-term effects, we measured basal area of living mature trees before and 4 and 8 years after treatment applications. Soil and foliar chemistry variables were also measured. Dolomitic limestone increased Ca, Mg, and pH in the soil Oe horizon. Mg was increased in the B horizon when comparing the plots receiving N with those receiving CaMg. In mature trees, foliar Ca and Mg concentrations were higher in the CaMg and N+CaMg plots than in the reference or N plots; foliar Ca concentration was higher in the N+CaMg plots compared with the CaMg plots, foliar Mg was higher in the CaMg plots than the N+CaMg plots; An-max was maximized due to N+CaMg treatment; Aqe decreased by N addition; and PAR at An-max increased by N or CaMg treatments alone, but the increase was maximized by their combination. No treatment effect was detected on basal areas of living mature trees four or eight years after treatment applications. In seedlings, An-max was increased by N+CaMg addition. The reference plots had an open herbaceous layer, but the plots receiving N had a dense monoculture of common woodfern in the forest floor

Urease activity as an index for assessing the maturity of cow manure and wheat residue vermicomposts.

Science.gov (United States)

Sudkolai, Saber Tayebi; Nourbakhsh, Farshid

2017-06-01

The establishment of a reliable index is an essential need to assess the degree of stability and maturity of solid wastes vermicomposts. The objective of this study was to investigate the effects of vermicomposting process on some chemical (pH, EC, OC, TN, lignin and C:N ratio) and biochemical properties of the cow manure (CM) and wheat residue (WR). Results demonstrated that during vermicomposting process of CM and WR urease activity was highly correlated with the time of vermicomposting (r=-0.97 ∗∗ for CM and r=-0.99 ∗∗ for WR), and well able to show the stability of organic waste. The urease activity showed significant correlations with the C:N ratio during the vermicomposting of CM and WR (r=0.89 ∗ and r=0.93 ∗∗ respectively) therefore it can be considered as a reliable indicator for determining the maturity and stability of organic wastes during vermicomposting process. Copyright © 2017. Published by Elsevier Ltd.

Micropropagation of annatto (Bixa orellana L.) from mature tree and assessment of genetic fidelity of micropropagated plants with RAPD markers.

Science.gov (United States)

Siril, E A; Joseph, Nisha

2013-01-01

An in vitro propagation technique based on axillary bud proliferation was developed for the first time to mature annatto (Bixa orellana L.) tree. Nodal segments cultured on Murashige and Skoog (MS) medium supplemented with 1.0 μM benzyl adenine (BA) and tender coconut water (10 %) showed significantly high (P micropropagated plants. The present protocol in brief, can be used for the clonal propagation of the superior genotype and preservation of germplasm.

Investigation of Growth and Survival of Transplanted Plane and Pine Trees According to IBA Application, Tree Age, Transplanting Time and Method

Directory of Open Access Journals (Sweden)

N. Etemadi

2015-03-01

Full Text Available The major problems in transplanting the landscape trees are high level of mortality and low establishment rate of transplanted trees, especially in the first year. In order to achieve the best condition for successful transplanting of pine and plane trees in Isfahan landscape, the present study was carried out based on a completely randomized block design with four replicates and three treatments including transplanting method (balled and burlapped and bare root, tree age (immature and mature and IBA application (0 and 150 mg/L. Trees were transplanted during 2009 and 2010 in three times (dormant season, early and late growing season. Survival rate and Relative Growth Rate index based on tree height (RGRH and trunk diameter (RGRD were measured during the first and second years. Trees transplanted early in the growing season showed the most survival percentage during the two years, as compared to other transplanting dates. Survival of Balled and burlapped and immature transplanted trees was significantly greater than bare root or mature trees. The significant effect of age treatment was continued in the second year. IBA treatment had no effect on survival rate of the studied species. Balled and burlapped and immature transplanted pine trees also had higher RGRH and RGRD compared to bare root or mature trees. According to the results of this study, early growing season is the best time for transplanting pine and plane trees. Also, transplanting of immature trees using balled and burlapped method is recommended to increase the survival and establishment rate.

Enzymatic hydrolyses of pretreated eucalyptus residues, wheat straw or olive tree pruning, and their mixtures towards flexible sugar-based biorefineries

DEFF Research Database (Denmark)

Silva-Fernandes, Talita; Marques, Susana; Rodrigues, Rita C. L. B.

2016-01-01

Eucalyptus residues, wheat straw, and olive tree pruning are lignocellulosic materials largely available in Southern Europe and have high potential to be used solely or in mixtures in sugar-based biorefineries for the production of biofuels and other bio-based products. Enzymatic hydrolysis...

Whole-tree distribution and temporal variation of non-structural carbohydrates in broadleaf evergreen trees.

Science.gov (United States)

Smith, Merryn G; Miller, Rebecca E; Arndt, Stefan K; Kasel, Sabine; Bennett, Lauren T

2018-04-01

Non-structural carbohydrates (NSCs) form a fundamental yet poorly quantified carbon pool in trees. Studies of NSC seasonality in forest trees have seldom measured whole-tree NSC stocks and allocation among organs, and are not representative of all tree functional types. Non-structural carbohydrate research has primarily focussed on broadleaf deciduous and coniferous evergreen trees with distinct growing seasons, while broadleaf evergreen trees remain under-studied despite their different growth phenology. We measured whole-tree NSC allocation and temporal variation in Eucalyptus obliqua L'Hér., a broadleaf evergreen tree species typically occurring in mixed-age temperate forests, which has year-round growth and the capacity to resprout after fire. Our overarching objective was to improve the empirical basis for understanding the functional importance of NSC allocation and stock changes at the tree- and organ-level in this tree functional type. Starch was the principal storage carbohydrate and was primarily stored in the stem and roots of young (14-year-old) trees rather than the lignotuber, which did not appear to be a specialized starch storage organ. Whole-tree NSC stocks were depleted during spring and summer due to significant decreases in starch mass in the roots and stem, seemingly to support root and crown growth but potentially exacerbated by water stress in summer. Seasonality of stem NSCs differed between young and mature trees, and was not synchronized with stem basal area increments in mature trees. Our results suggest that the relative magnitude of seasonal NSC stock changes could vary with tree growth stage, and that the main drivers of NSC fluctuations in broadleaf evergreen trees in temperate biomes could be periodic disturbances such as summer drought and fire, rather than growth phenology. These results have implications for understanding post-fire tree recovery via resprouting, and for incorporating NSC pools into carbon models of mixed

Releasing 75- to 80-year-old Appalachian hardwood sawtimber trees--5-year d.b.h. response

Science.gov (United States)

H.C. Smith; G.W. Miller

1991-01-01

Generally, mature trees on good growing sites are seldom thinned or released. Instead, at maturity the trees are harvested. Data were summarized from north-central West Virginia study areas (northern red oak site index 70 feet and above) where mature trees were released on all sides of the crown (full release).

Insecticides authorized for use on olive trees and the relationship between their registration and residues in olive oil

Directory of Open Access Journals (Sweden)

Lentza-Rizos, Ch.

1996-12-01

Full Text Available In order to eliminate losses due to insect attack, several insecticides are used on olive trees. Their residues in olive oil constitute an important parameter of its quality and must be monitored regularly and kept as low possible in order to ensure consumer protection. In this paper the insecticides authorized for use on olive trees are listed and their ADIs and Codex Alimentarius MRLs reported. The existing registrations are discussed from the point of view of their residues in oil.

Diversos insecticidas son usados para eliminar las pérdidas debidas al ataque de insectos en olivos. Sus residuos en el aceite de oliva constituyen un parámetro importante de su calidad y deben ser controlados con regularidad y mantenidos tan bajos como sea posible en orden a asegurar la protección del consumidor. En este artículo se incluyen los distintos insecticidas autorizados para su uso en olivos así como los valores de ingesta diaria aceptable para el hombre y los límites máximos autorizados de los mismos. Los registros existentes se discuten desde el punto de vista de sus residuos en el aceite.

Root architecture and wind-firmness of mature Pinus pinaster.

Science.gov (United States)

Danjon, Frédéric; Fourcaud, Thierry; Bert, Didier

2005-11-01

This study aims to link three-dimensional coarse root architecture to tree stability in mature timber trees with an average of 1-m rooting depth. Undamaged and uprooted trees were sampled in a stand damaged by a storm. Root architecture was measured by three-dimensional (3-D) digitizing. The distribution of root volume by root type and in wind-oriented sectors was analysed. Mature Pinus pinaster root systems were organized in a rigid 'cage' composed of a taproot, the zone of rapid taper of horizontal surface roots and numerous sinkers and deep roots, imprisoning a large mass of soil and guyed by long horizontal surface roots. Key compartments for stability exhibited strong selective leeward or windward reinforcement. Uprooted trees showed a lower cage volume, a larger proportion of oblique and intermediate depth horizontal roots and less wind-oriented root reinforcement. Pinus pinaster stability on moderately deep soils is optimized through a typical rooting pattern and a considerable structural adaptation to the prevailing wind and soil profile.

Tree health and physiology in a changing environment

Science.gov (United States)

Walter C. Shortle; Kevin T. Smith; Rakesh Minocha; Subhash Minocha; Philip M. Wargo; Kristina A. Vogt

2000-01-01

A tree is a large, long-lived, perennial, compartmented, woody, shedding, walling plant. This definition is based on new tree biology concepts (Shigo, 1986a,b, 1991) and explains much about how mature trees function through their unique structure. When the tree begins its life, it is mostly leaf in mass (Fig. 7.la). As a tree grows in stature, it becomes mostly stem in...

Leaf physiological responses of mature Norway Spruce trees exposed to elevated carbon dioxide and temperature

Science.gov (United States)

Lamba, Shubhangi; Uddling, Johan; Räntfors, Mats; Hall, Marianne; Wallin, Göran

2014-05-01

Leaf photosynthesis, respiration and stomatal conductance exert strong control over the exchange of carbon, water and energy between the terrestrial biosphere and the atmosphere. As such, leaf physiological responses to rising atmospheric CO2 concentration ([CO2]) and temperature have important implications for the global carbon cycle and rate of ongoing global warming, as well as for local and regional hydrology and evaporative cooling. It is therefore critical to improve the understanding of plant physiological responses to elevated [CO2] and temperature, in particular for boreal and tropical ecosystems. In order to do so, we examined physiological responses of mature boreal Norway spruce trees (ca 40-years old) exposed to elevated [CO2] and temperature inside whole-tree chambers at Flakaliden research site, Northern Sweden. The trees were exposed to a factorial combination of two levels of [CO2] (ambient and doubled) and temperature (ambient and +2.8 degree C in summer and +5.6 degree C in winter). Three replicates in each of the four treatments were used. It was found that photosynthesis was increased considerably in elevated [CO2], but was not affected by the warming treatment. The maximum rate of photosynthetic carboxylation was reduced in the combined elevated [CO2] and elevated temperature treatment, but not in single factor treatments. Elevated [CO2] also strongly increased the base rate of respiration and to a lesser extent reduced the temperature sensitivity (Q10 value) of respiration; responses which may be important for the carbon balance of these trees which have a large proportion of shaded foliage. Stomatal conductance at a given VPD was reduced by elevated temperature treatment, to a degree that mostly offset the higher vapour pressure deficit in warmed air with respect to transpiration. Elevated [CO2] did not affect stomatal conductance, and thus increased the ratio of leaf internal to external [CO2]. These results indicate that the large elevated

Evaluating Lignin-Rich Residues from Biochemical Ethanol Production of Wheat Straw and Olive Tree Pruning by FTIR and 2D-NMR

Directory of Open Access Journals (Sweden)

José I. Santos

2015-01-01

Full Text Available Lignin-rich residues from the cellulose-based industry are traditionally incinerated for internal energy use. The future biorefineries that convert cellulosic biomass into biofuels will generate more lignin than necessary for internal energy use, and therefore value-added products from lignin could be produced. In this context, a good understanding of lignin is necessary prior to its valorization. The present study focused on the characterization of lignin-rich residues from biochemical ethanol production, including steam explosion, saccharification, and fermentation, of wheat straw and olive tree pruning. In addition to the composition and purity, the lignin structures (S/G ratio, interunit linkages were investigated by spectroscopy techniques such as FTIR and 2D-NMR. Together with the high lignin content, both residues contained significant amounts of carbohydrates, mainly glucose and protein. Wheat straw lignin showed a very low S/G ratio associated with p-hydroxycinnamates (p-coumarate and ferulate, whereas a strong predominance of S over G units was observed for olive tree pruning lignin. The main interunit linkages present in both lignins were β-O-4′ ethers followed by resinols and phenylcoumarans. These structural characteristics determine the use of these lignins in respect to their valorization.

An improved tree height measurement technique tested on mature southern pines

Science.gov (United States)

Don C. Bragg

2008-01-01

Virtually all techniques for tree height determination follow one of two principles: similar triangles or the tangent method. Most people apply the latter approach, which uses the tangents of the angles to the top and bottom and a true horizontal distance to the subject tree. However, few adjust this method for ground slope, tree lean, crown shape, and crown...

Ecology and Conservation of the Critically Endangered Tree Species Gymnocladus assamicus in Arunachal Pradesh, India

International Nuclear Information System (INIS)

Choudhury, B.I.; Khan, M.L.; Arunachalam, A.; Das, A.K.

2007-01-01

Gymnocladus assamicus is a critically endangered leguminous tree species endemic to Northeast India. Mature pods of the trees yield soap material and are collected by local people for domestic purposes and religious activities. G. assamicus grows on hill slopes and along banks of streams. Male and hermaphrodite flowers are borne by separate individual trees. Altogether 28 mature trees were documented from nine populations. Of these, very few regenerating trees were found. This species regenerates only through seeds. The major constraints to natural regeneration are over harvesting of mature fruits, habitat destruction, grazing, predation of seeds by scatter-hoarding animals, poor percentage of seed germination due to their hard-waxy seed coats, and the lack of seed dispersal. Effective conservation initiatives should emphasize sustainable harvesting of mature pods, awareness among local people, and preservation of surviving individuals of the species. Nonetheless, reintroduction of the species to suitable ecological habitats is also recommended.

Tree-centered spot firing - a technique for prescribed burning beneath standing trees.

Science.gov (United States)

C. Phillip Weatherspoon; George A. Almond; Carl N. Skinner

1989-01-01

Prescribed burning beneath standing trees normally requires efforts to protect residual trees from excessive fire damage. Damage to both crowns and boles is strongly influenced by flame length, a fire characteristic functionally related to fireline intensity (Albini 1976). In a good prescribed burn, therefore, the prescription specifies desired or maximum flame lengths...

[Molecular cloning of activin betaA subunit mature peptide from peafowl and its application in taxonomy and phylogeny].

Science.gov (United States)

Zou, Fang-Dong; Tong, Xin-Xin; Yue, Bi-Song

2005-03-01

The sequences of activin gene betaA subunit mature peptide have been amplified from white peafowl, blue peafowl (pavo cristatus) and green peafowl (pavo muticus) genomic DNA by polymerase chain reaction (PCR) with a pair of degenerate primers. The target fragments were cloned into the vector pMD18-T and sequenced. The length of activin gene betaA subunit mature peptide is 345bp, which encoded a peptide of 115 amino acid residues. Sequence analysis of activin gene betaA subunit mature peptide demonstrated that the identity of nucleotide is 98.0% between blue peaflowl and green peafowl, and the identity of that is 98.8% between blue peaflowl and white peafow. Sequences comparison in NCBI revealed that the sequences of activin gene betaA subunit mature peptides of different species are highly conserved during evolution process. In addition, the restriction enzyme map of activins is high similar between white peafowl and blue peafowl. Phylogenetic tree was constructed with Mega 2 and Clustalxldx software. The result showed that white peafowl has a closer relationship to blue peafowl than to green peafowl. Considered the nucleotide differences of peafowls' activin gene betaA subunit mature peptides, a highly conserved region, we supported that white peafowl was derived from blue peafowl, and it is more possible the hybrid but just the product of color mutation, or maybe as a subspecies of Pavo genus.

Deferment cutting in Appalachian hardwoods: the what, whys, and hows

Science.gov (United States)

H. Clay Smith; Gary W. Miller

1991-01-01

Deferment cutting is a regeneration practice that resembles a seed-tree or shelterwood cutting. The difference is that residual trees are not cut when the reproduction becomes established. Instead, residual trees are left until new reproduction matures to sawtimber size, and another regeneration cut is the silvicultural objective. Hence, with deferment cutting specific...

Leaf gas exchange of mature bottomland oak trees

Science.gov (United States)

Rico M. Gazal; Mark E. Kubiske; Kristina F. Connor

2009-01-01

We determined how changes in environmental moisture affected leaf gas exchange in Nuttall (Quercus texana Buckley), overcup (Q. lyrata Walt.), and dominant and codominant swamp chestnut (Q. michauxii Nutt.) oak trees in Mississippi and Louisiana. We used canopy access towers to measure leaf level gas...

Persistence and bioaccumulation of oxyfluorfen residues in onion.

Science.gov (United States)

Sondhia, Shobha

2010-03-01

A field study was conducted to determine persistence and bioaccumulation of oxyflorfen residues in onion crop at two growth stages. Oxyfluorfen (23.5% EC) was sprayed at 250 and 500 g ai/ha on the crop (variety, N53). Mature onion and soil samples were collected at harvest. Green onion were collected at 55 days from each treated and control plot and analyzed for oxyfluorfen residues by a validated high-performance liquid chromatography method with an accepted recovery of 78-92% at the minimum detectable concentration of 0.003 microg g(-1). Analysis showed 0.015 and 0.005 microg g(-1) residues of oxyfluorfen at 250 g a.i. ha(-1) rate in green and mature onion samples, respectively; however, at 500 g a.i.ha(-1) rates, 0.025 and 0.011 microg g(-1) of oxyfluorfen residues were detected in green and mature onion samples, respectively. Soil samples collected at harvest showed 0.003 and 0.003 microg g(-1) of oxyfluorfen residues at the doses 250 and 500 g a.i. ha(-1), respectively. From the study, a pre-harvest interval of 118 days for onion crop after the herbicide application is suggested.

Genetic transformation of mature citrus plants.

Science.gov (United States)

Cervera, Magdalena; Juárez, José; Navarro, Luis; Peña, Leandro

2005-01-01

Most woody fruit species have long juvenile periods that drastically prolong the time required to analyze mature traits. Evaluation of characteristics related to fruits is a requisite to release any new variety into the market. Because of a decline in regenerative and transformation potential, genetic transformation procedures usually employ juvenile material as the source of plant tissue, therefore resulting in the production of juvenile plants. Direct transformation of mature material could ensure the production of adult transgenic plants, bypassing in this way the juvenile phase. Invigoration of the source adult material, establishment of adequate transformation and regeneration conditions, and acceleration of plant development through grafting allowed us to produce transgenic mature sweet orange trees flowering and bearing fruits in a short time period.

Cycling of grain legume residue nitrogen

DEFF Research Database (Denmark)

Jensen, E.S.

1995-01-01

Symbiotic nitrogen fixation by legumes is the main input of nitrogen in ecological agriculture. The cycling of N-15-labelled mature pea (Pisum sativum L.) residues was studied during three years in small field plots and lysimeters. The residual organic labelled N declined rapidly during the initial...... management methods in order to conserve grain legume residue N sources within the soil-plant system....

Objective Provision Tree (OPT) in sodium cooled fast reactors; Objective Provision Tree (OPT) en reactores rapidos refrigerados por sodio. Aplicacion a la funcion de seguridad de evacuacion de calor residual

Energy Technology Data Exchange (ETDEWEB)

Queral, C.; Montero-Mayorga, J.; Gonzalez-Cadelo, J.

2013-07-01

Application to the safety function of residual heat removal As part of the project {sup S}afety Assessment for Reactor of GEN-IV (SARGEN IV) has been implemented the methodology ISAM from the IAEA to the safety assessment of new sodium reactor designs. Within the ISAM, a new tool to facilitate this assessment is the Objective Provision Tree (OPT) which documents the provisions necessary for each of the levels of defense in depth, as well as for each critical function of security. Due to the design innovations that have sodium reactors, the evaluation of safety and licensing of these reactors requires special considerations. In this work we have analyzed the mechanisms of failure of the safety function concerning the evacuation of waste heat, and have been proposed different provisions for each of the first three levels of defense in depth. The main result of this work is reflected in the elaboration of the OPTs, one for each of the first three levels of defense in depth for the safety of evacuation of residual heat function. These trees represent in a schematic way the provisions necessary to comply with the objectives of each level which are respectively: 1) deviations from normal operation, 2) control of abnormal operation and fault detection and 3) incidental control.

Epiphytic bromeliad communities in secondary and mature forest in a tropical premontane area

NARCIS (Netherlands)

Cascante Marin, A.M.; Wolf, J.H.D.; Oostermeijer, J.G.B.; den Nijs, J.C.M.; Sanahuja, O.; Duran Apuy, A.

2006-01-01

We analyzed the differences in species richness, community composition, population structure and within-tree location of epiphytic bromeliads in contiguous secondary and mature forests in a premontane area in Costa Rica. Diversity in the mature forest was highest, and the communities differed in

Herpes Simplex Virus Type 1 Glycoprotein B Requires a Cysteine Residue at Position 633 for Folding, Processing, and Incorporation into Mature Infectious Virus Particles

Science.gov (United States)

Laquerre, Sylvie; Anderson, Dina B.; Argnani, Rafaela; Glorioso, Joseph C.

1998-01-01

Herpes simplex virus type 1 (HSV-1) glycoprotein B (gB) resides in the virus envelope in an oligomeric form and plays an essential role in virus entry into susceptible host cells. The oligomerizing domain is a movable element consisting of amino acids 626 to 653 in the gB external domain. This domain contains a single cysteine residue at position 633 (Cys-633) that is predicted to form an intramolecular disulfide bridge with Cys-596. In this study, we examined gB oligomerization, processing, and incorporation into mature virus during infection by two mutant viruses in which either the gB Cys-633 [KgB(C633S)] or both Cys-633 and Cys-596 [KgB(C596S/C633S)] residues were mutated to serine. The result of immunofluorescence studies and analyses of released virus particles showed that the mutant gB molecules were not transported to the cell surface or incorporated into mature virus envelopes and thus infectious virus was not produced. Immunoprecipitation studies revealed that the mutant gB molecules were in an oligomeric configuration and that these mutants produced hetero-oligomers with a truncated form of gB consisting of residues 1 to 43 and 595 to 904, the latter containing the oligomerization domain. Pulse-chase experiments in combination with endoglycosidase H treatment determined that the mutant molecules were improperly processed, having been retained in the endoplasmic reticulum (ER). Coimmunoprecipitation experiments revealed that the cysteine mutations resulted in gB misfolding and retention by the molecular chaperones calnexin, calreticulin, and Grp78 in the ER. The altered conformation of the gB mutant glycoproteins was directly detected by a reduction in monoclonal antibody recognition of two previously defined distinct antigenic sites located within residues 381 to 441 and 595 to 737. The misfolded molecules were not transported to the cell surface as hetero-oligomers with wild-type gB, suggesting that the conformational change could not be corrected by

Effects of rainfall exclusion on leaf gas exchange traits and osmotic adjustment in mature canopy trees of Dryobalanops aromatica (Dipterocarpaceae) in a Malaysian tropical rain forest.

Science.gov (United States)

Inoue, Yuta; Ichie, Tomoaki; Kenzo, Tanaka; Yoneyama, Aogu; Kumagai, Tomo'omi; Nakashizuka, Tohru

2017-10-01

Climate change exposes vegetation to unusual levels of drought, risking a decline in productivity and an increase in mortality. It still remains unclear how trees and forests respond to such unusual drought, particularly Southeast Asian tropical rain forests. To understand leaf ecophysiological responses of tropical rain forest trees to soil drying, a rainfall exclusion experiment was conducted on mature canopy trees of Dryobalanops aromatica Gaertn.f. (Dipterocarpaceae) for 4 months in an aseasonal tropical rain forest in Sarawak, Malaysia. The rainfall was intercepted by using a soft vinyl chloride sheet. We compared the three control and three treatment trees with respect to leaf water use at the top of the crown, including stomatal conductance (gsmax), photosynthesis (Amax), leaf water potential (predawn: Ψpre; midday: Ψmid), leaf water potential at turgor loss point (πtlp), osmotic potential at full turgor (π100) and a bulk modulus of elasticity (ε). Measurements were taken using tree-tower and canopy-crane systems. During the experiment, the treatment trees suffered drought stress without evidence of canopy dieback in comparison with the control trees; e.g., Ψpre and Ψmid decreased with soil drying. Minimum values of Ψmid in the treatment trees decreased during the experiment, and were lower than πtlp in the control trees. However, the treatment trees also decreased their πtlp by osmotic adjustment, and the values were lower than the minimum values of their Ψmid. In addition, the treatment trees maintained gs and Amax especially in the morning, though at midday, values decreased to half those of the control trees. Decreasing leaf water potential by osmotic adjustment to maintain gs and Amax under soil drying in treatment trees was considered to represent anisohydric behavior. These results suggest that D. aromatica may have high leaf adaptability to drought by regulating leaf water consumption and maintaining turgor pressure to improve its leaf

A practical alternative to single tree selection?

Science.gov (United States)

Gary W. Miller; H. Clay Smith

1993-01-01

When landowners want to develop and maintain an uneven-aged tree structure in eastern hardwood stands, single-tree selection often is suggested as the only advisable, long-term partial regeneration harvest method. Single-tree selection is preferred because it provides a means for improving quality and controlling stocking of the residual stand necessary for sustained...

Growth following pruning of young loblolly pine trees: some early results

Science.gov (United States)

Ralph L. Amateis; Harold E. Burkhart

2006-01-01

In the spring of 2000, a designed experiment was established to study the effects of pruning on juvenile loblolly pine (Pinus taeda L.) tree growth and the subsequent formation of mature wood. Trees were planted at a 3 m x 3 m square spacing in plots of 6 rows with 6 trees per row, with the inner 16 trees constituting the measurement plot. Among the...

Monitoring tree mortality in mature Douglas-fir forests: size and species matter

Science.gov (United States)

Background/Question/MethodsA regional increase in tree mortality rates associated with climate change will influence forest health and ecosystem services, including water quality and quantity. In recent decades, accelerated tree mortality has occurred in some, but not all, fores...

Toxic effects of ethylene oxide residues on bovine embryos in vitro.

Science.gov (United States)

Holyoak, G R; Wang, S; Liu, Y; Bunch, T D

1996-04-15

The potential of ethylene oxide (EtO) residues in exposed plastic tissue culture dishes to adversely affect bovine oocyte maturation, fertilization and subsequent embryonic development was monitored. In experiment 1, the effects of aeration time and aeration combined with washing of EtO-gassed culture dishes on the extent of residual toxicity were investigated. There was no cleavage in any treatment in which oocytes were matured and fertilized in dishes exposed to EtO. EtO residues caused functional degeneration of oocytes even when culture dishes were aerated for more than 12 days post EtO-exposure and repeatedly washed. In experiment 2, the residual toxicity of EtO gas on in vitro maturation (IVM), in vitro fertilization (IVF) and in vitro culture (IVC) were evaluated. Cleavage rate significantly decreased and post-cleavage development was retarded in ova maintained in dishes treated with EtO either during IVM or IVF. EtO residues may be more detrimental to spermatozoa than to oocytes which may have been the primary cause of fertilization failure during IVF.

Regression analysis using dependent Polya trees.

Science.gov (United States)

Schörgendorfer, Angela; Branscum, Adam J

2013-11-30

Many commonly used models for linear regression analysis force overly simplistic shape and scale constraints on the residual structure of data. We propose a semiparametric Bayesian model for regression analysis that produces data-driven inference by using a new type of dependent Polya tree prior to model arbitrary residual distributions that are allowed to evolve across increasing levels of an ordinal covariate (e.g., time, in repeated measurement studies). By modeling residual distributions at consecutive covariate levels or time points using separate, but dependent Polya tree priors, distributional information is pooled while allowing for broad pliability to accommodate many types of changing residual distributions. We can use the proposed dependent residual structure in a wide range of regression settings, including fixed-effects and mixed-effects linear and nonlinear models for cross-sectional, prospective, and repeated measurement data. A simulation study illustrates the flexibility of our novel semiparametric regression model to accurately capture evolving residual distributions. In an application to immune development data on immunoglobulin G antibodies in children, our new model outperforms several contemporary semiparametric regression models based on a predictive model selection criterion. Copyright © 2013 John Wiley & Sons, Ltd.

Differences in xylem and leaf hydraulic traits explain differences in drought tolerance among mature Amazon rainforest trees.

Science.gov (United States)

Powell, Thomas L; Wheeler, James K; de Oliveira, Alex A R; da Costa, Antonio Carlos Lola; Saleska, Scott R; Meir, Patrick; Moorcroft, Paul R

2017-10-01

Considerable uncertainty surrounds the impacts of anthropogenic climate change on the composition and structure of Amazon forests. Building upon results from two large-scale ecosystem drought experiments in the eastern Brazilian Amazon that observed increases in mortality rates among some tree species but not others, in this study we investigate the physiological traits underpinning these differential demographic responses. Xylem pressure at 50% conductivity (xylem-P 50 ), leaf turgor loss point (TLP), cellular osmotic potential (π o ), and cellular bulk modulus of elasticity (ε), all traits mechanistically linked to drought tolerance, were measured on upper canopy branches and leaves of mature trees from selected species growing at the two drought experiment sites. Each species was placed a priori into one of four plant functional type (PFT) categories: drought-tolerant versus drought-intolerant based on observed mortality rates, and subdivided into early- versus late-successional based on wood density. We tested the hypotheses that the measured traits would be significantly different between the four PFTs and that they would be spatially conserved across the two experimental sites. Xylem-P 50 , TLP, and π o , but not ε, occurred at significantly higher water potentials for the drought-intolerant PFT compared to the drought-tolerant PFT; however, there were no significant differences between the early- and late-successional PFTs. These results suggest that these three traits are important for determining drought tolerance, and are largely independent of wood density-a trait commonly associated with successional status. Differences in these physiological traits that occurred between the drought-tolerant and drought-intolerant PFTs were conserved between the two research sites, even though they had different soil types and dry-season lengths. This more detailed understanding of how xylem and leaf hydraulic traits vary between co-occuring drought-tolerant and

Columnar apple tree named 'Moonlight'

OpenAIRE

Tupý, J. (Jaroslav); Louda, O. (Otto); Zima, J. (Jan)

2010-01-01

A new and distinct Malus domestica (Borkh.) apple tree variety is provided which exhibits a columnar tree type, weakly vigorous compact growth, predominant bearing on spurs and V.sub.f-resistance against scab. The new variety yields late maturing, medium-sized, globose-conical to conical fruits having good storage quality. The fruit color is yellow-green to yellow with a partial red to orange blush. The fruits have a yellow-colored firm flesh that is crisp and juicy with a good sweet/sour bal...

Genomics-assisted breeding in fruit trees

OpenAIRE

Iwata, Hiroyoshi; Minamikawa, Mai F.; Kajiya-Kanegae, Hiromi; Ishimori, Motoyuki; Hayashi, Takeshi

2016-01-01

Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the pl...

Pulp quality from small-diameter trees.

Science.gov (United States)

G.C. Myers; S. Kumar; R.R. Gustafson; R.J. Barbour; S.M. Abubakr

1997-01-01

Kraft and thermomechanical (TMP) pulps were prepared and evaluated from lodgepole pine and mixed Douglas-fir/western larch sawmill residue chips; lodgepole pine, Douglas-fir, and western larch submerchantable logs; and lodgepole pine, Douglas-fir, and western larch small trees and tops. Kraft pulp from small trees and tops was identical to that from submerchantable...

Effect of saline conditions on the maturation process of Clementine clemenules fruits on two different rootstocks

Energy Technology Data Exchange (ETDEWEB)

Navarro, J. M.; Gomez-Gomez, A.; Perez-Perez, J. G.; Botia, P.

2010-07-01

The production of mandarins is important in the Mediterranean area, where the continued use of saline water reduces fruit yield and modifies fruit quality. Grafted trees of Clemenules mandarin scion on Carrizo citrange and Cleopatra mandarin rootstocks, two of the most common citrus rootstocks employed in this area, were irrigated with two saline treatments (control and 30 mM NaCl). The fruit quality was studied through the last two months before the fruit harvest. Salinity reduced both the fruit number and the mean fruit weight on Carrizo trees whereas no fruit weight reduction was observed on Cleopatra. The decrease of fruit weight on Carrizo trees is probably due to the lower water content and consequently the lower juice percentage. Although the saline treatment produced significant differences in some fruit quality variables (shape and thickness indices) throughout the maturation process, they were minimal at the harvest time. Total soluble solids (TSS) were significantly higher in fruits from the saline treatments, probably due to a passive dehydration. It is also possible that de novo synthesis of sugars occurred, since fruits from Cleopatra trees receiving the saline treatment had similar water contents but higher TSS than control fruits. The external fruit colour indicated that the saline treatment accelerated the maturation process; however, the maturity index showed that the high acidity of these fruits delayed the internal maturation with respect to the control fruits. (Author) 41 refs.

The effect of acid precipitation on tree growth in eastern North America

Science.gov (United States)

Charles V. Cogbill

1976-01-01

Detailed study of the history of forest tree growth by tree-ring analysis is used to assess the effect of acid precipitation. The pattern and historical trends of acid precipitation deposition are compared with growth trends from mature forest stands in New Hampshire and Tennessee. No clear indication of a regional, synchronized decrease in tree growth was found. The...

A dark incubation period is important for Agrobacterium-mediated transformation of mature internode explants of sweet orange, grapefruit, citron, and a citrange rootstock.

Science.gov (United States)

Marutani-Hert, Mizuri; Bowman, Kim D; McCollum, Greg T; Mirkov, T Erik; Evens, Terence J; Niedz, Randall P

2012-01-01

Citrus has an extended juvenile phase and trees can take 2-20 years to transition to the adult reproductive phase and produce fruit. For citrus variety development this substantially prolongs the time before adult traits, such as fruit yield and quality, can be evaluated. Methods to transform tissue from mature citrus trees would shorten the evaluation period via the direct production of adult phase transgenic citrus trees. Factors important for promoting shoot regeneration from internode explants from adult phase citrus trees were identified and included a dark incubation period and the use of the cytokinin zeatin riboside. Transgenic trees were produced from four citrus types including sweet orange, citron, grapefruit, and a trifoliate hybrid using the identified factors and factor settings. The critical importance of a dark incubation period for shoot regeneration was established. These results confirm previous reports on the feasibility of transforming mature tissue from sweet orange and are the first to document the transformation of mature tissue from grapefruit, citron, and a trifoliate hybrid.

Functional Traits and Water Transport Strategies in Lowland Tropical Rainforest Trees

Science.gov (United States)

Apgaua, Deborah M. G.; Ishida, Françoise Y.; Tng, David Y. P.; Laidlaw, Melinda J.; Santos, Rubens M.; Rumman, Rizwana; Eamus, Derek; Holtum, Joseph A. M.; Laurance, Susan G. W.

2015-01-01

Understanding how tropical rainforest trees may respond to the precipitation extremes predicted in future climate change scenarios is paramount for their conservation and management. Tree species clearly differ in drought susceptibility, suggesting that variable water transport strategies exist. Using a multi-disciplinary approach, we examined the hydraulic variability in trees in a lowland tropical rainforest in north-eastern Australia. We studied eight tree species representing broad plant functional groups (one palm and seven eudicot mature-phase, and early-successional trees). We characterised the species’ hydraulic system through maximum rates of volumetric sap flow and velocities using the heat ratio method, and measured rates of tree growth and several stem, vessel, and leaf traits. Sap flow measures exhibited limited variability across species, although early-successional species and palms had high mean sap velocities relative to most mature-phase species. Stem, vessel, and leaf traits were poor predictors of sap flow measures. However, these traits exhibited different associations in multivariate analysis, revealing gradients in some traits across species and alternative hydraulic strategies in others. Trait differences across and within tree functional groups reflect variation in water transport and drought resistance strategies. These varying strategies will help in our understanding of changing species distributions under predicted drought scenarios. PMID:26087009

Functional Traits and Water Transport Strategies in Lowland Tropical Rainforest Trees.

Directory of Open Access Journals (Sweden)

Deborah M G Apgaua

Full Text Available Understanding how tropical rainforest trees may respond to the precipitation extremes predicted in future climate change scenarios is paramount for their conservation and management. Tree species clearly differ in drought susceptibility, suggesting that variable water transport strategies exist. Using a multi-disciplinary approach, we examined the hydraulic variability in trees in a lowland tropical rainforest in north-eastern Australia. We studied eight tree species representing broad plant functional groups (one palm and seven eudicot mature-phase, and early-successional trees. We characterised the species' hydraulic system through maximum rates of volumetric sap flow and velocities using the heat ratio method, and measured rates of tree growth and several stem, vessel, and leaf traits. Sap flow measures exhibited limited variability across species, although early-successional species and palms had high mean sap velocities relative to most mature-phase species. Stem, vessel, and leaf traits were poor predictors of sap flow measures. However, these traits exhibited different associations in multivariate analysis, revealing gradients in some traits across species and alternative hydraulic strategies in others. Trait differences across and within tree functional groups reflect variation in water transport and drought resistance strategies. These varying strategies will help in our understanding of changing species distributions under predicted drought scenarios.

Functional Traits and Water Transport Strategies in Lowland Tropical Rainforest Trees.

Science.gov (United States)

Apgaua, Deborah M G; Ishida, Françoise Y; Tng, David Y P; Laidlaw, Melinda J; Santos, Rubens M; Rumman, Rizwana; Eamus, Derek; Holtum, Joseph A M; Laurance, Susan G W

2015-01-01

Understanding how tropical rainforest trees may respond to the precipitation extremes predicted in future climate change scenarios is paramount for their conservation and management. Tree species clearly differ in drought susceptibility, suggesting that variable water transport strategies exist. Using a multi-disciplinary approach, we examined the hydraulic variability in trees in a lowland tropical rainforest in north-eastern Australia. We studied eight tree species representing broad plant functional groups (one palm and seven eudicot mature-phase, and early-successional trees). We characterised the species' hydraulic system through maximum rates of volumetric sap flow and velocities using the heat ratio method, and measured rates of tree growth and several stem, vessel, and leaf traits. Sap flow measures exhibited limited variability across species, although early-successional species and palms had high mean sap velocities relative to most mature-phase species. Stem, vessel, and leaf traits were poor predictors of sap flow measures. However, these traits exhibited different associations in multivariate analysis, revealing gradients in some traits across species and alternative hydraulic strategies in others. Trait differences across and within tree functional groups reflect variation in water transport and drought resistance strategies. These varying strategies will help in our understanding of changing species distributions under predicted drought scenarios.

Growth responses of mature loblolly pine to dead wood.manipulations.

Energy Technology Data Exchange (ETDEWEB)

Ulyshen, Michael D.; Horn, Scott; Hanula, James L.

2012-04-01

Large-scale manipulations of dead wood in mature Pinus taeda L. stands in the southeastern United States included a major one-time input of logs (fivefold increase in log volume) created by felling trees onsite, annual removals of all dead wood above >10 cm in diameter and >60 cm in length, and a reference in which no manipulations took place. We returned over a decade later to determine how these treatments affected tree growth using increment cores. There were no significant differences in tree density, basal area or tree diameters among treatments at the time of sampling. Although tree growth was consistently higher in the log-input plots and lower in the removal plots, this was true even during the 5 year period before the experiment began. When growth data from this initial period were included in the model as a covariate, no differences in post-treatment tree growth were detected. It is possible that treatment effects will become apparent after more time has passed, however.

Effect of tree logging on reproductive performance in Blue Tits (Cyanistes caeruleus)

NARCIS (Netherlands)

Amininasab, Seyed Mehdi; Xu, Charles C. Y.; Kingma, Sjouke A.; Komdeur, Jan

For birds, habitat quality is largely determined by local vegetation, and reproductive performance can therefore be negatively influenced by anthropogenic activities. A tree logging event enabled us to examine the effect of removing trees of different maturities and types on the reproductive

Spatial and temporal soil moisture resource partitioning by trees and grasses in a temperate savanna, Arizona, USA.

Science.gov (United States)

Weltzin, Jake F; McPherson, Guy R

1997-10-01

Stable isotope analysis was used to determine sources of water used by coexisting trees and grasses in a temperate savanna dominated by Quercus emoryi Torr. We predicted that (1) tree seedlings and bunchgrasses utilize shallow sources of soil water, (2) mature savanna trees use deeper sources of water, and (3) trees switch from shallow to deep water sources within 1 year of germination. We found that Q. emoryi trees, saplings, and seedlings (about 2 months, 1 year, and 2 years old), and the dominant bunchgrass [Trachypogon montufari (H.B.K.) Nees.] utilized seasonally available moisture from different depths within the soil profile depending on size/age relationships. Sapling and mature Q. emoryi acquired water from >50 cm deep, 2-month-old seedlings utilized water from emoryi within extant stands of native grasses. The potential for subsequent interaction between Q. emoryi and native grasses was evidenced by similar patterns of soil water use by 1- and 2-year-old seedlings and grasses. Q. emoryi seedlings did not switch from shallow to deep sources of soil water within 2 years of germination: water use by these seedlings apparently becomes independent of water use by grasses after 2 years of age. Finally, older trees (saplings, mature trees) use water from deeper soil layers than grasses, which may facilitate the stable coexistence of mature trees and grasses. Potential shifts in the seasonality of precipitation may alter interactions between woody plants and grasses within temperate savannas characterized by bimodal precipitation regimes: reductions in summer precipitation or soil moisture may be particularly detrimental to warm-season grasses and seedlings of Q. emoryi.

Effect of tree logging on reproductive performance in Blue Tits (Cyanistes caeruleus)

OpenAIRE

Amininasab, Seyed Mehdi; Xu, Charles C. Y.; Kingma, Sjouke A.; Komdeur, Jan

2017-01-01

For birds, habitat quality is largely determined by local vegetation, and reproductive performance can therefore be negatively influenced by anthropogenic activities. A tree logging event enabled us to examine the effect of removing trees of different maturities and types on the reproductive performance of Blue Tits (Cyanistes caeruleus). Against expectations, only the logging of small coniferous trees, but not larger and deciduous trees, was associated with a reduction in the number of eggs ...

From a tree to a stand in Finnish boreal forests - biomass estimation and comparison of methods

Energy Technology Data Exchange (ETDEWEB)

Liu, Chunjiang

2009-07-01

There is an increasing need to compare the results obtained with different methods of estimation of tree biomass in order to reduce the uncertainty in the assessment of forest biomass carbon. In this study, tree biomass was investigated in a 30-year-old Scots pine (Pinus sylvestris) (Young-Stand) and a 130-year-old mixed Norway spruce (Picea abies)-Scots pine stand (Mature-Stand) located in southern Finland (61deg50' N, 24deg22' E). In particular, a comparison of the results of different estimation methods was conducted to assess the reliability and suitability of their applications. For the trees in Mature-Stand, annual stem biomass increment fluctuated following a sigmoid equation, and the fitting curves reached a maximum level (from about 1 kg yr-1 for understorey spruce to 7 kg yr-1 for dominant pine) when the trees were 100 years old). Tree biomass was estimated to be about 70 Mg ha-1 in Young-Stand and about 220 Mg ha-1 in Mature-Stand. In the region (58.00-62.13 degN, 14-34 degE, <= 300 m a.s.l.) surrounding the study stands, the tree biomass accumulation in Norway spruce and Scots pine stands followed a sigmoid equation with stand age, with a maximum of 230 Mg ha-1 at the age of 140 years. In Mature-Stand, lichen biomass on the trees was 1.63 Mg ha-1 with more than half of the biomass occurring on dead branches, and the standing crop of litter lichen on the ground was about 0.09 Mg ha-1. There were substantial differences among the results estimated by different methods in the stands. These results imply that a possible estimation error should be taken into account when calculating tree biomass in a stand with an indirect approach. (orig.)

Fertilization Changes Chemical Defense in Needles of Mature Norway Spruce (Picea abies

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Line Nybakken

2018-06-01

Full Text Available Nitrogen availability limits growth in most boreal forests. However, parts of the boreal zone receive significant levels of nitrogen deposition. At the same time, forests are fertilized to increase volume growth and carbon sequestration. No matter the source, increasing nitrogen in the boreal forest ecosystem will influence the resource situation for its primary producers, the plants, with possible implications for their defensive chemistry. In general, fertilization reduces phenolic compound concentrations in trees, but existing evidence mainly comes from studies on young plants. Given the role of the phenolic compounds in protection against herbivores and other forest pests, it is important to know if phenolics are reduced with fertilization also in mature trees. The evergreen Norway spruce is long-lived, and it is reasonable that defensive strategies could change from the juvenile to the reproductive and mature phases. In addition, as the needles are kept for several years, defense could also change with needle age. We sampled current and previous year needles from an N fertilization experiment in a Norway spruce forest landscape in south-central Norway to which N had been added annually for 13 years. We analyzed total nitrogen (N and carbon (C, as well as low-molecular phenolics and condensed tannins. Needles from fertilized trees had higher N than those from controls plots, and fertilization decreased concentrations of many flavonoids, as well as condensed tannins in current year needles. In previous year needles, some stilbenes and condensed tannins were higher in fertilized trees. In control trees, the total phenolic concentration was almost five times as high in previous year needles compared with those from the current year, and there were great compositional differences. Previous year needles contained highest concentrations of acetophenone and stilbenes, while in the current year needles the flavonoids, and especially coumaroyl

Accumulation of logging residue in first thinnings of Scots pine and Norway spruce. Impact of top bucking diameter of roundwood

Energy Technology Data Exchange (ETDEWEB)

Raeisaenen, T.; Nurmi, J. (Finnish Forest Research Inst., Kannus (Finland)), e-mail: tommi.raisanen@metla.fi

2010-07-01

The aim of this study was to examine the impacts of changes in the minimum top diameter of roundwood on the accumulation of logging residue. The aim was also to compare estimates of residue accumulation calculated by tree-specific biomass models with field measurements from thinnings. Felling experiments were performed in first thinnings of pine and spruce to evaluate the model calculations. In the felling, mean relative masses of the tree tops of spruce were nearly doubled with each increment of 2 cm in the top diameter. Respectively in pine, the mean relative tree top mass was increased by 50-60 % when the top diameter was increased by 2 cm. The mass of total residue (tree top and all delimbed branches) was similarly increased, but the differences were not as large. Compared to pine, a lesser variation in the crown mass of the spruce sample resulted in a more accurate model prediction of masses of tree tops and total residue. The results indicate that the residue accumulation from a small group of trees cannot be predicted very reliably, but when a larger tree population or area is considered, the model predictions are enhanced to a more practicable level. (orig.)

Regulatory redox state in tree seeds

Directory of Open Access Journals (Sweden)

Ewelina Ratajczak

2017-12-01

Full Text Available Peroxiredoxins (Prx are important regulators of the redox status of tree seeds during maturation and long-term storage. Thioredoxins (Trx are redox transmitters and thereby regulate Prx activity. Current research is focused on the association of Trx with Prx in tree seeds differing in the tolerance to desiccation. The results will allow for better understanding the regulation of the redox status in orthodox, recalcitrant, and intermediate seeds. The findings will also elucidate the role of the redox status during the loss of viability of sensitive seeds during drying and long-term storage.

Cobalt accumulation and circulation by blackgum trees

International Nuclear Information System (INIS)

Thomas, W.A.

1975-01-01

Blackgum (Nyssa sylvatica Marsh.) trees accumulate far greater concentrations of cobalt in mature foliage than do other species on the same site (363 ppM in ash of blackgum, compared with about 3 ppM by mockernut hickory and about 1 ppM by red maple, tulip tree, and white oak). Cobalt concentrations in dormant woody tissues of blackgum also significantly exceed those in the other four species. Inoculation of six blackgums with 60 Co revealed that cobalt remains mobile in the trees for at least 3 years. Foliar concentrations of stable cobalt increase uniformly until senescence. In late August, foliage accounts for only 9 percent of total tree weight but 57 percent of total tree cobalt. Losses of cobalt from trees occur almost entirely by leaf abscission, and the loss rates of weight and cobalt from decomposing litter are similar. Retention of cobalt in the biologically active soil layers perpetuates zones of cobalt concentration created by this species in woodlands

A dark incubation period is important for Agrobacterium-mediated transformation of mature internode explants of sweet orange, grapefruit, citron, and a citrange rootstock.

Directory of Open Access Journals (Sweden)

Mizuri Marutani-Hert

Full Text Available BACKGROUND: Citrus has an extended juvenile phase and trees can take 2-20 years to transition to the adult reproductive phase and produce fruit. For citrus variety development this substantially prolongs the time before adult traits, such as fruit yield and quality, can be evaluated. Methods to transform tissue from mature citrus trees would shorten the evaluation period via the direct production of adult phase transgenic citrus trees. METHODOLOGY/PRINCIPAL FINDINGS: Factors important for promoting shoot regeneration from internode explants from adult phase citrus trees were identified and included a dark incubation period and the use of the cytokinin zeatin riboside. Transgenic trees were produced from four citrus types including sweet orange, citron, grapefruit, and a trifoliate hybrid using the identified factors and factor settings. SIGNIFICANCE: The critical importance of a dark incubation period for shoot regeneration was established. These results confirm previous reports on the feasibility of transforming mature tissue from sweet orange and are the first to document the transformation of mature tissue from grapefruit, citron, and a trifoliate hybrid.

Study of the Atucha I nuclear power plant's residual heat removal system unavailability through the fault tree analysis and common cause failures

International Nuclear Information System (INIS)

Terrado, C.A.

1991-06-01

The present essay offers a comprehensive research of the Atucha I nuclear power plant's residual heat removal system unavailability, including Fault Tree Analysis and Common Cause Failures (CCF) treatment. The study is developed within the Event Tree perspective that considers the loss of external electrical power of the initiating event. The event was constructed by the Safety Evaluations Division of the Ezeiza Atomic Center in Argentina. According to the Event Tree, the research includes system demand during plant operation with 132 KV and emergency generation (Diesel motor generators). The system unavailability assessment is approached in two different ways: a) Considering independent failures only. b) Taking into account the existence of Common Cause Events, and modeling dependent failures. The Fault Tree quantification is played using the AIEA PSAPACK Code. The assessment data base is compiled from plant specific records and generic data bases like TECDOC 478. After Fault Tree model logic development, some general procedures used in common cause failures treating are applied to pick up another set of solutions. The results of the study are: a) Four Fault Trees have been developed to model the abovementioned system: 132 KV and emergency generation, both including and excluding CCF. b) The following unavailability values were obtained: 132 KV independent failures only: 7 10 -4 . Emergency generation independent failures only: 1.53 10 -2 . 132 KV dependent and independent failures: 3.6 10 -3 . Emergency generation dependent and independent failures: 1.74 10 -2 . The major conclusions obtained from the precedent results are: a) When using 132 KV system configuration, minimal cut sets involving common cause failures represents 81%from total system unavailability. b) The dependent failures treatment is an important task to be considered in safety assessments in order to reach more realistic values. (Author) [es

Are temperate mature forests buffered from invasive lianas?

Science.gov (United States)

Pavlovic, Noel B.; Leicht-Young, Stacey A.

2011-01-01

Mature and old-growth forests are often thought to be buffered against invasive species due to low levels of light and infrequent disturbance. Lianas (woody vines) and other climbing plants are also known to exhibit lower densities in older forests. As part of a larger survey of the lianas of the southern Lake Michigan region in mature and old-growth forests, the level of infestation by invasive lianas was evaluated. The only invasive liana detected in these surveys was Celastrus orbiculatus Thunb. (Celastraceae). Although this species had only attached to trees and reached the canopy in a few instances, it was present in 30% of transects surveyed, mostly as a component of the ground layer. Transects with C. orbiculatus had higher levels of soil potassium and higher liana richness than transects without. In contrast, transects with the native C. scandens had higher pH, sand content, and soil magnesium and lower organic matter compared to transects where it was absent. Celastrus orbiculatus appears to be a generalist liana since it often occurs with native lianas. Celastrus orbiculatus poses a substantial threat to mature forests as it will persist in the understory until a canopy gap or other disturbance provides the light and supports necessary for it to ascend to the canopy and damage tree species. As a result, these forests should be monitored by land managers so that C. orbiculatus eradication can occur while invasions are at low densities and restricted to the ground layer.

Water and nitrogen management of young and maturing pomegranate trees

Science.gov (United States)

Commercial production of pomegranate in California has increased drastically in recent years and the planted area reached 12,148 ha in 2011. A majority of the pomegranate trees are grown in the southern San Joaquin Valley which has a Mediterranean climate with hot dry summers and no rainfall, and ir...

Fruit load governs transpiration of olive trees

NARCIS (Netherlands)

Bustan, Amnon; Dag, Arnon; Yermiyahu, Uri; Erel, Ran; Presnov, Eugene; Agam, Nurit; Kool, Dilia; Iwema, Joost; Zipori, Isaac; Ben-Gal, Alon

2016-01-01

We tested the hypothesis that whole-tree water consumption of olives (Olea europaea L.) is fruit load-dependent and investigated the driving physiological mechanisms. Fruit load was manipulated in mature olives grown in weighing-drainage lysimeters. Fruit was thinned or entirely removed from

Disentangling the positive and negative effects of trees on maize performance in smallholdings of Northern Rwanda

NARCIS (Netherlands)

Ndoli, Alain; Baudron, Frédéric; Schut, Tom; Mukuralinda, Athanase; Giller, Ken E.

2017-01-01

In the sub-humid parts of East Africa, high population density and pressure on land have led farmers to integrate multipurpose trees on farm. Although mixing trees and crops generates numerous benefits (e.g., fuelwood, timber), it often reduces crop yields. Whereas the effects of mature trees on

Carbaryl residues in maize products

International Nuclear Information System (INIS)

Zayed, S.M.A.D.; Mansour, S.A.; Mostafa, I.Y.; Hassan, A.

1976-01-01

The 14 C-labelled insecticide carbaryl was synthesized from [1- 14 C]-1-naphthol at a specific activity of 3.18mCig -1 . Maize plants were treated with the labelled insecticide under simulated conditions of agricultural practice. Mature plants were harvested and studied for distribution of total residues in untreated grains as popularly roasted and consumed, and in the corn oil and corn germ products. Total residues found under these conditions in the respective products were 0.2, 0.1, 0.45 and 0.16ppm. (author)

Tree size as a factor influencing leaf emergence and leaf fall in Acacia nigrescens and Combretum apiculatum in the Kruger National Park

Directory of Open Access Journals (Sweden)

P. Novellie

1989-10-01

Full Text Available In Acacia nigrescens and Combretum apiculatum saplings tended to retain leaves over the dry season, whereas the mature trees generally lost most of their leaves. In Acacia nigrescens the production of new leaves over the dry season was more commonly observed in saplings than in mature trees.

Genomics-assisted breeding in fruit trees.

Science.gov (United States)

Iwata, Hiroyoshi; Minamikawa, Mai F; Kajiya-Kanegae, Hiromi; Ishimori, Motoyuki; Hayashi, Takeshi

2016-01-01

Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the plant to assess the marketable product (fruit). In this article, we describe the potential of genomics-assisted breeding, which uses these novel genomics-based approaches, to break through these barriers in conventional fruit tree breeding. We first introduce the molecular marker systems and whole-genome sequence data that are available for fruit tree breeding. Next we introduce the statistical methods for biparental linkage and quantitative trait locus (QTL) mapping as well as GWAS and GS. We then review QTL mapping, GWAS, and GS studies conducted on fruit trees. We also review novel technologies for rapid generation advancement. Finally, we note the future prospects of genomics-assisted fruit tree breeding and problems that need to be overcome in the breeding.

Nitrogen Nutrition of Fruit Trees to Reconcile Productivity and Environmental Concerns.

Science.gov (United States)

Carranca, Corina; Brunetto, Gustavo; Tagliavini, Massimo

2018-01-10

Although perennial fruit crops represent 1% of global agricultural land, they are of a great economic importance in world trade and in the economy of many regions. The perennial woody nature of fruit trees, their physiological stages of growth, the root distribution pattern, and the presence of herbaceous vegetation in alleys make orchard systems efficient in the use and recycling of nitrogen (N). The present paper intends to review the existing literature on N nutrition of young and mature deciduous and evergreen fruit trees with special emphasis to temperate and Mediterranean climates. There are two major sources of N contributing to vegetative tree growth and reproduction: root N uptake and internal N cycling. Optimisation of the use of external and internal N sources is important for a sustainable fruit production, as N use efficiency by young and mature fruit trees is generally lower than 55% and losses of fertilizer N may occur with the consequent economic and environmental concern. Organic alternatives to mineral N fertilizer like the application of manure, compost, mulching, and cover crops are scarcely used in perennial fruit trees, in spite of the fact that society's expectations call for more sustainable production techniques and the demand for organic fruits is increasing.

Hydraulic architecture and tracheid allometry in mature Pinus palustris and Pinus elliottii trees.

Science.gov (United States)

Gonzalez-Benecke, C A; Martin, T A; Peter, G F

2010-03-01

Pinus palustris Mill. (longleaf pine, LL) and Pinus elliottii Engelm. var. elliottii (slash pine, SL) frequently co-occur in lower coastal plain flatwoods of the USA, with LL typically inhabiting slightly higher and better-drained microsites than SL. The hydraulic architecture and tracheid dimensions of roots, trunk and branches of mature LL and SL trees were compared to understand their role in species microsite occupation. Root xylem had higher sapwood-specific hydraulic conductivity (k(s)) and was less resistant to cavitation compared with branches and trunk sapwood. Root k(s) of LL was significantly higher than SL, whereas branch and trunk k(s) did not differ between species. No differences in vulnerability to cavitation were observed in any of the organs between species. Across all organs, there was a significant but weak trade-off between water conduction efficiency and safety. Tracheid hydraulic diameter (D(h)) was strongly correlated with k(s) across all organs, explaining >73% of the variation in k(s). In contrast, tracheid length (L(t)) explained only 2.4% of the variability. Nevertheless, for trunk xylem, k(s) was 39.5% higher at 20 m compared with 1.8 m; this increase in k(s) was uncorrelated with D(h) and cell-wall thickness but was strongly correlated with the difference in L(t). Tracheid allometry markedly changed between sapwood of roots, trunks and branches, possibly reflecting different mechanical constraints. Even though vulnerability to cavitation was not different for sapwood of roots, branches or the trunks of LL and SL, higher sapwood to leaf area ratio and higher maximum sapwood-specific hydraulic conductivity in roots of LL are functional traits that may provide LL with a competitive advantage on drier soil microsites.

Capacity of old trees to respond to environmental change.

Science.gov (United States)

Phillips, Nathan G; Buckley, Thomas N; Tissue, David T

2008-11-01

Atmospheric carbon dioxide [CO2] has increased dramatically within the current life spans of long-lived trees and old forests. Consider that a 500-year-old tree in the early twenty-first century has spent 70% of its life growing under pre-industrial levels of [CO2], which were 30% lower than current levels. Here we address the question of whether old trees have already responded to the rapid rise in [CO2] occurring over the past 150 years. In spite of limited data, aging trees have been shown to possess a substantial capacity for increased net growth after a period of post-maturity growth decline. Observations of renewed growth and physiological function in old trees have, in some instances, coincided with Industrial Age increases in key environmental resources, including [CO2], suggesting the potential for continued growth in old trees as a function of continued global climate change.

Multi-trait and random regression mature weight heritability and ...

African Journals Online (AJOL)

Legendre polynomials of orders 4, 3, 6 and 3 were used for animal and maternal genetic and permanent environmental effects, respectively, considering five classes of residual variances. Mature weight (five years) direct heritability estimates were 0.35 (MM) and 0.38 (RRM). Rank correlation between sires' breeding values ...

Predicting logging residues: an interim equation for Appalachian oak sawtimber

Science.gov (United States)

A. Jeff Martin

1975-01-01

An equation, using dbh, dbh², bole length, and sawlog height to predict the cubic-foot volume of logging residue per tree, was developed from data collected on 36 mixed oaks in southwestern Virginia. The equation produced reliable results for small sawtimber trees, but additional research is needed for other species, sites, and utilization practices.

Interception storage capacities of tropical rainforest canopy trees

Science.gov (United States)

Herwitz, Stanley R.

1985-04-01

The rainwater interception storage capacities of mature canopy trees in a tropical rainforest site in northeast Queensland, Australia, were approximated using a combination of field and laboratory measurements. The above-ground vegetative surfaces of five selected species (three flaky-barked; two smooth-barked) were saturated under laboratory conditions in order to establish their maximum interception storage capacities. Average leaf surface interception storages ranged from 112 to 161 ml m -2. The interception storages of bark ranged from 0.51 to 0.97 ml cm -3. These standardized interception storages were applied to estimates of leaf surface area and bark volume for 51 mature canopy trees representing the selected species in the field site. The average whole tree interception storage capacities of the five species ranged from 110 to 5281 per tree and 2.2 to 8.3 mm per unit projected crown area. The highly significant interspecific differences in interception storage capacity suggest that both floristic and demographic data are needed in order to accurately calculate a forest-wide interception storage capacity for species-rich tropical rainforest vegetation. Species with large woody surface areas and small projected crown areas are capable of storing the greatest depth equivalents of rainwater under heavy rainfall conditions. In the case of both the flaky-barked and the smooth-barked species, bark accounted for > 50% of the total interception storage capacity under still-air conditions, and > 80% under turbulent air conditions. The emphasis in past interception studies on the role of leaf surfaces in determining the interception storage capacity of a vegetative cover must be modified for tropical rainforests to include the storage capacity provided by the bark tissue on canopy trees.

Maturation curves and degree-days accumulation for fruits of 'Folha Murcha' orange trees Curvas de maturação e graus-dia acumulados para frutos de plantas de laranjeira 'Folha Murcha'

Directory of Open Access Journals (Sweden)

Neusa Maria Colauto Stenzel

2006-06-01

Full Text Available The effect of thermal summation on orange fruit growth on different rootstocks has not been studied for the State of Paraná, Brazil. This research evaluated the growth of fruits by means of maturation curves, and quantified the growing degree-days (GDD accumulation required for fruit maturation in 'Folha Murcha' orange trees budded on 'Rangpur' lime, 'Volkamer' lemon, 'Sunki' mandarin, and 'Cleopatra' mandarin, in Paranavaí and Londrina, PR. In both locations and all rootstocks, the fruits showed evolution in total soluble solids (TSS content in relation to GDD accumulation, with a quadratic tendency of curve fitting; total titratable acidity (TTA had an inverse quadratic fitting, and the (TSS/TTA ratio showed a positive linear regression. Fruits in Paranavaí presented a higher development rate towards maturity than those in Londrina, for all rootstocks. The advancing of the initial maturation stage of fruits in Paranavaí in relation to those in Londrina occurred in the following descending order: 'Volkamer' lemon (92 days, 'Cleopatra' mandarin (81 days, 'Sunki' mandarin (79 days, 'Rangpur' lime (77 days. In Londrina, trees on 'Rangpur' lime and 'Volkamer' lemon were ready for harvest 8 and 15 days before those on the 'Cleopatra' and 'Sunki' mandarins, respectively. In Paranavaí, the beginning of fruit maturation in trees on 'Volkamer' lemon occurred 15, 19, and 28 days earlier than on 'Rangpur' lime, 'Cleopatra' mandarin, and 'Sunki' mandarin, respectively. Considering 12.8ºC as the lower base temperature, the thermal sum for fruit growth and maturation of 'Folha Murcha' orange ranged from 4,462 to 5,090 GDD.O efeito da soma térmica no crescimento do fruto de laranja em diferentes porta-enxertos não tem sido estudado no Estado do Paraná, Brasil. Esta pesquisa avaliou o crescimento dos frutos por meio de curvas de maturação e quantificou os graus-dia acumulados (GDA necessários para a maturação dos frutos em laranjeiras 'Folha

Tree species composition affects the abundance of rowan (Sorbus aucuparia L.) in urban forests in Finland.

Science.gov (United States)

Hamberg, Leena; Lehvävirta, Susanna; Kotze, D Johan; Heikkinen, Juha

2015-03-15

Recent studies have shown a considerable increase in the abundance of rowan (Sorbus aucuparia) saplings in urban forests in Finland, yet the reasons for this increase are not well understood. Here we investigated whether canopy cover or tree species composition, i.e., the basal areas of different tree species in Norway spruce dominated urban forests, affects the abundances of rowan seedlings, saplings and trees. Altogether 24 urban forest patches were investigated. We sampled the number of rowan and other saplings, and calculated the basal areas of trees. We showed that rowan abundance was affected by tree species composition. The basal area of rowan trees (≥ 5 cm in diameter at breast height, dbh) decreased with increasing basal area of Norway spruce, while the cover of rowan seedlings increased with an increase in Norway spruce basal area. However, a decrease in the abundance of birch (Betula pendula) and an increase in the broad-leaved tree group (Acer platanoides, Alnus glutinosa, Alnus incana, Amelanchier spicata, Prunus padus, Quercus robur, Rhamnus frangula and Salix caprea) coincided with a decreasing number of rowans. Furthermore, rowan saplings were scarce in the vicinity of mature rowan trees. Although it seems that tree species composition has an effect on rowan, the relationship between rowan saplings and mature trees is complex, and therefore we conclude that regulating tree species composition is not an easy way to keep rowan thickets under control in urban forests in Finland. Copyright © 2015 Elsevier Ltd. All rights reserved.

Optimizing continuous cover management of boreal forest when timber prices and tree growth are stochastic

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Timo Pukkala

2015-03-01

Full Text Available Background Decisions on forest management are made under risk and uncertainty because the stand development cannot be predicted exactly and future timber prices are unknown. Deterministic calculations may lead to biased advice on optimal forest management. The study optimized continuous cover management of boreal forest in a situation where tree growth, regeneration, and timber prices include uncertainty. Methods Both anticipatory and adaptive optimization approaches were used. The adaptive approach optimized the reservation price function instead of fixed cutting years. The future prices of different timber assortments were described by cross-correlated auto-regressive models. The high variation around ingrowth model was simulated using a model that describes the cross- and autocorrelations of the regeneration results of different species and years. Tree growth was predicted with individual tree models, the predictions of which were adjusted on the basis of a climate-induced growth trend, which was stochastic. Residuals of the deterministic diameter growth model were also simulated. They consisted of random tree factors and cross- and autocorrelated temporal terms. Results Of the analyzed factors, timber price caused most uncertainty in the calculation of the net present value of a certain management schedule. Ingrowth and climate trend were less significant sources of risk and uncertainty than tree growth. Stochastic anticipatory optimization led to more diverse post-cutting stand structures than obtained in deterministic optimization. Cutting interval was shorter when risk and uncertainty were included in the analyses. Conclusions Adaptive optimization and management led to 6%–14% higher net present values than obtained in management that was based on anticipatory optimization. Increasing risk aversion of the forest landowner led to earlier cuttings in a mature stand. The effect of risk attitude on optimization results was small.

A lifetime perspective of biomass allocation in Quercus pubescens trees in a dry, alpine valley

NARCIS (Netherlands)

Slot, M.; Janse-ten Klooster, S.H.; Sterck, F.J.; Sass-Klaassen, U.; Zweifel, R.

2012-01-01

Plasticity of biomass allocation is a key to growth and survival of trees exposed to variable levels of stress in their lifetime. Most of our understanding of dynamic biomass allocation comes from seedling studies, but plasticity may be different in mature trees. We used stem analysis to reconstruct

PROVIDING R-TREE SUPPORT FOR MONGODB

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L. Xiang

2016-06-01

Full Text Available Supporting large amounts of spatial data is a significant characteristic of modern databases. However, unlike some mature relational databases, such as Oracle and PostgreSQL, most of current burgeoning NoSQL databases are not well designed for storing geospatial data, which is becoming increasingly important in various fields. In this paper, we propose a novel method to provide R-tree index, as well as corresponding spatial range query and nearest neighbour query functions, for MongoDB, one of the most prevalent NoSQL databases. First, after in-depth analysis of MongoDB’s features, we devise an efficient tabular document structure which flattens R-tree index into MongoDB collections. Further, relevant mechanisms of R-tree operations are issued, and then we discuss in detail how to integrate R-tree into MongoDB. Finally, we present the experimental results which show that our proposed method out-performs the built-in spatial index of MongoDB. Our research will greatly facilitate big data management issues with MongoDB in a variety of geospatial information applications.

Providing R-Tree Support for Mongodb

Science.gov (United States)

Xiang, Longgang; Shao, Xiaotian; Wang, Dehao

2016-06-01

Supporting large amounts of spatial data is a significant characteristic of modern databases. However, unlike some mature relational databases, such as Oracle and PostgreSQL, most of current burgeoning NoSQL databases are not well designed for storing geospatial data, which is becoming increasingly important in various fields. In this paper, we propose a novel method to provide R-tree index, as well as corresponding spatial range query and nearest neighbour query functions, for MongoDB, one of the most prevalent NoSQL databases. First, after in-depth analysis of MongoDB's features, we devise an efficient tabular document structure which flattens R-tree index into MongoDB collections. Further, relevant mechanisms of R-tree operations are issued, and then we discuss in detail how to integrate R-tree into MongoDB. Finally, we present the experimental results which show that our proposed method out-performs the built-in spatial index of MongoDB. Our research will greatly facilitate big data management issues with MongoDB in a variety of geospatial information applications.

Wild capuchin monkeys anticipate the amount of ripe fruit in natural trees.

Science.gov (United States)

Tujague, María Paula; Janson, Charles H

2017-09-01

Tropical forests have a high diversity of tree species which have very low densities and vary across time in their seasons of peak fruiting and maturation rates. As evidence of the ability of primates to track or anticipate changes in fruit production at individual trees, researchers have used the increased speed of primate groups toward more rewarding food patches. We analyzed the speed of approach to natural trees of wild capuchin monkeys under the effect of scramble competition, after excluding any plausible visual, olfactory and auditory cues. We conducted all-day group follows of three habituated capuchin groups at Iguazú National Park, Argentina, collecting data on ranging behavior and patterns of visits to fruit trees in relation with their location and fruit availability. Travel speed varied according to the expected reward at a feeding tree, increasing as rewards increased from low values, but decreasing again at very high values. Also, travel speed varied with time of day, decreasing from the time of first activity as the monkeys became less hungry, and increasing again toward late afternoon. Measures of unripe fruit cover did not explain variation in travel speed at any distance from a focal tree. Our data imply that, after excluding sensory cues, capuchins appear to anticipate time-varying ripe fruit quantity of natural resources, suggesting that they use memory of tree location and anticipation of fruit maturation. We also confirm that speed is a good measure about expectations of resources, as has been shown in previous studies.

Land use history and population dynamics of free-standing figs in a maturing forest.

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Larissa Albrecht

Full Text Available Figs (Ficus sp. are often considered as keystone resources which strongly influence tropical forest ecosystems. We used long-term tree-census data to track the population dynamics of two abundant free-standing fig species, Ficus insipida and F. yoponensis, on Barro Colorado Island (BCI, a 15.6-km2 island in Lake Gatún, Panama. Vegetation cover on BCI consists of a mosaic of old growth (>400 years and maturing (about 90-150 year old secondary rainforest. Locations and conditions of fig trees have been mapped and monitored on BCI for more than 35 years (1973-2011, with a focus on the Lutz Catchment area (25 ha. The original distribution of the fig trees shortly after the construction of the Panama Canal was derived from an aerial photograph from 1927 and was compared with previous land use and forest status. The distribution of both fig species (~850 trees is restricted to secondary forest. Of the original 119 trees observed in Lutz Catchment in 1973, >70% of F. insipida and >90% of F. yoponensis had died by 2011. Observations in other areas on BCI support the trend of declining free-standing figs. We interpret the decline of these figs on BCI as a natural process within a maturing tropical lowland forest. Senescence of the fig trees appears to have been accelerated by severe droughts such as the strong El Niño event in the year 1982/83. Because figs form such an important food resource for frugivores, this shift in resource availability is likely to have cascading effects on frugivore populations.

Agrobacterium-medicated transformation of mature Prunus serotina (black cherry) and regeneration of trangenic shoots

Science.gov (United States)

Xiaomei Liu; Paula Pijut

2010-01-01

A protocol for Agrobacterium-mediated transformation was developed for in vitro leaf explants of an elite, mature Prunus serotina tree. Agrobacterium tumefaciens strain EHA105 harboring an RNAi plasmid with the black cherry AGAMOUS (AG) gene was used. Bacteria were induced...

Differential controls by climate and physiology over the emission rates of biogenic volatile organic compounds from mature trees in a semi-arid pine forest.

Science.gov (United States)

Eller, Allyson S D; Young, Lindsay L; Trowbridge, Amy M; Monson, Russell K

2016-02-01

Drought has the potential to influence the emission of biogenic volatile organic compounds (BVOCs) from forests and thus affect the oxidative capacity of the atmosphere. Our understanding of these influences is limited, in part, by a lack of field observations on mature trees and the small number of BVOCs monitored. We studied 50- to 60-year-old Pinus ponderosa trees in a semi-arid forest that experience early summer drought followed by late-summer monsoon rains, and observed emissions for five BVOCs-monoterpenes, methylbutenol, methanol, acetaldehyde and acetone. We also constructed a throughfall-interception experiment to create "wetter" and "drier" plots. Generally, trees in drier plots exhibited reduced sap flow, photosynthesis, and stomatal conductances, while BVOC emission rates were unaffected by the artificial drought treatments. During the natural, early summer drought, a physiological threshold appeared to be crossed when photosynthesis ≅2 μmol m(-2) s(-1) and conductance ≅0.02 mol m(-2) s(-1). Below this threshold, BVOC emissions are correlated with leaf physiology (photosynthesis and conductance) while BVOC emissions are not correlated with other physicochemical factors (e.g., compound volatility and tissue BVOC concentration) that have been shown in past studies to influence emissions. The proportional loss of C to BVOC emission was highest during the drought primarily due to reduced CO2 assimilation. It appears that seasonal drought changes the relations among BVOC emissions, photosynthesis and conductance. When drought is relaxed, BVOC emission rates are explained mostly by seasonal temperature, but when seasonal drought is maximal, photosynthesis and conductance-the physiological processes which best explain BVOC emission rates-decline, possibly indicating a more direct role of physiology in controlling BVOC emission.

Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

Science.gov (United States)

Zhou, Xiaoqi; Wang, Shen S. J.; Chen, Chengrong

2017-12-01

Forest plantations have been widely used as an effective measure for increasing soil carbon (C), and nitrogen (N) stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA) to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species-enzyme-C/N model to investigate how temperature and tree species influence soil C/N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG), N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP) and phosphorus acquisition enzymes (acid phosphatases). The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01-2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99-2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii) and hoop pine (Araucaria cunninghamii Ait.), increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22-1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native coniferous tree species like hoop pine and

Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

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X. Zhou

2017-12-01

Full Text Available Forest plantations have been widely used as an effective measure for increasing soil carbon (C, and nitrogen (N stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species–enzyme–C∕N model to investigate how temperature and tree species influence soil C∕N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG, N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP and phosphorus acquisition enzymes (acid phosphatases. The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01–2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99–2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii and hoop pine (Araucaria cunninghamii Ait., increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22–1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native

Fruit load governs transpiration of olive trees

Science.gov (United States)

Bustan, Amnon; Dag, Arnon; Yermiyahu, Uri; Erel, Ran; Presnov, Eugene; Agam, Nurit; Kool, Dilia; Iwema, Joost; Zipori, Isaac; Ben-Gal, Alon

2016-01-01

We tested the hypothesis that whole-tree water consumption of olives (Olea europaea L.) is fruit load-dependent and investigated the driving physiological mechanisms. Fruit load was manipulated in mature olives grown in weighing-drainage lysimeters. Fruit was thinned or entirely removed from trees at three separate stages of growth: early, mid and late in the season. Tree-scale transpiration, calculated from lysimeter water balance, was found to be a function of fruit load, canopy size and weather conditions. Fruit removal caused an immediate decline in water consumption, measured as whole-plant transpiration normalized to tree size, which persisted until the end of the season. The later the execution of fruit removal, the greater was the response. The amount of water transpired by a fruit-loaded tree was found to be roughly 30% greater than that of an equivalent low- or nonyielding tree. The tree-scale response to fruit was reflected in stem water potential but was not mirrored in leaf-scale physiological measurements of stomatal conductance or photosynthesis. Trees with low or no fruit load had higher vegetative growth rates. However, no significant difference was observed in the overall aboveground dry biomass among groups, when fruit was included. This case, where carbon sources and sinks were both not limiting, suggests that the role of fruit on water consumption involves signaling and alterations in hydraulic properties of vascular tissues and tree organs. PMID:26802540

Hydraulic redistribution of water from Pinus ponderosa trees to seedlings: evidence for an ectomycorrhizal pathway.

Science.gov (United States)

Warren, Jeffrey M; Brooks, J Renée; Meinzer, Frederick C; Eberhart, Joyce L

2008-01-01

While there is strong evidence for hydraulic redistribution (HR) of soil water by trees, it is not known if common mycorrhizal networks (CMN) can facilitate HR from mature trees to seedlings under field conditions. Ponderosa pine (Pinus ponderosa) seedlings were planted into root-excluding 61-microm mesh barrier chambers buried in an old-growth pine forest. After 2 yr, several mature trees were cut and water enriched in D(2)O and acid fuchsin dye was applied to the stumps. Fine roots and mycorrhizal root tips of source trees became heavily dyed, indicating reverse sap flow in root xylem transported water from stems throughout root systems to the root hyphal mantle that interfaces with CMN. Within 3 d, D(2)O was found in mesh-chamber seedling foliage > 1 m from source trees; after 3 wk, eight of 10 mesh-chamber seedling stem samples were significantly enriched above background levels. Average mesh-chamber enrichment was 1.8 x greater than that for two seedlings for which the connections to CMN were broken by trenching before D(2)O application. Even small amounts of water provided to mycorrhizas by HR may maintain hyphal viability and facilitate nutrient uptake under drying conditions, which may provide an advantage to seedlings hydraulically linked by CMN to large trees.

Chloride stress triggers maturation and negatively affects the postharvest quality of persimmon fruit. Involvement of calyx ethylene production.

Science.gov (United States)

Besada, Cristina; Gil, Rebeca; Bonet, Luis; Quiñones, Ana; Intrigliolo, Diego; Salvador, Alejandra

2016-03-01

In recent years many hectares planted with persimmon trees in E Spain have been diagnosed with chloride toxicity. An effect of this abiotic stress on fruit quality has been reported in different crops. However, the impact of chloride stress on persimmon fruit quality is unknown. The harvest and postharvest quality of persimmons harvested from trees that manifest different intensities of chloride toxicity foliar symptoms was evaluated herein. Our results revealed that fruits from trees under chloride stress conditions underwent chloride accumulation in the calyx, which was more marked the greater the salt stress intensity trees were exposed to. Increased chloride concentrations in the calyx stimulated ethylene production in this tissue. In the fruits affected by slight and moderate chloride stress, calyx ethylene production accelerated the maturity process, as reflected by increased fruit colour and diminished fruit firmness. In the fruits under severe chloride stress, the high ethylene levels in the calyx triggered autocatalytic ethylene production in other fruit tissues, which led fruit maturity to drastically advance. In these fruits effectiveness of CO2 deastringency treatment was not complete and fruit softening enhanced during the postharvest period. Moreover, chloride stress conditions had a marked effect on reducing fruit weight, even in slightly stressed trees. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Promoting Reduced-Impact Logging in Tropical Developing Countries: A Success Story of Technology Transfer

Science.gov (United States)

Dennis P. Dykstra

2007-01-01

Industrial timber harvesting operations commonly employ heavy machinery and thus have the potential to inflict significant damage on soils, streams, and residual vegetation. Impacts associated with such operations have been especially troubling in many tropical countries, where mature trees often have large crowns capable of destroying other trees when they fall; soils...

Electronic Nose to Determine the Maturity Index of the Tree Tomato (Cyphomandra Betacea Sendt

Directory of Open Access Journals (Sweden)

Durán-Acevedo Cristhian Manuel

2014-07-01

Full Text Available This paper presents the development of an Electronic Nose for nondestructive monitoring of tree tomato ripening process (Cyphomandra Betacea Sendt. An array of 16 chemical gas sensors was arranged for the detection of three ripeness levels of tree types of tomato (green, ripe and overripe. A Probabilistic Neural Network (PNN as variable selection technique (Simulated Annealing was coupled to improve the result and the PCA (Principal Component Analysis technique was applied to discriminate each one of volatile compounds. A number of measures for physicochemical tests were analyzed with the goal of evaluating the physical, chemical and sensory properties (i.e, pH, acidity and Brix of the product, and the results of the Electronic Nose were compared. The olfactory system was able to classify the samples of tree tomato in three different stages with very high accuracy, to reach a success rate 99.886% in classification.

Obtaining cherry and apple tree radiomutants by irradiation of grafts in gamma cell

International Nuclear Information System (INIS)

Chvojka, L.; Fridrich, A.

1980-01-01

The aim of the study was to obtain dwarf mutants of cherry and apple trees. Two methods of irradiation were used: a) winter grafts were irradiated with 60 Co (4-5 kR) and grafted in the crowns of adult trees or of two-year-old rootstocks; b) summer buds on mature annual shots were irradiated with 2-3 kR and grafted on two-year-old rootstocks. Thus the clones of dwarf cherry trees (cv. Napoleon's and Techlovicka) were obtained which were further tested for fruit-bearing in experimental plantations. Colour mutants of apple tree (cv. Champion) with yellow and red fruits were also obtained as well as dwarf types of trees. (author)

Hydrogen cyanamide on citrus: preliminary data on phytotoxicity and influence on flush in potted and field trees

Science.gov (United States)

Bloom in individual citrus trees typically continues for more than a month in south Florida, with even greater bloom duration within most orchard blocks because of variation in bloom timing between trees. Prolonged bloom contributes to variable fruit maturity as harvest approaches and increases seve...

Seasonal patterns of reserve and soluble carbohydrates in mature sugar maple (Acer saccharum)

Science.gov (United States)

B.L. Wong; K.L. Baggett; A.H. Rye

2003-01-01

Sugar maple (Acer saccharum Marsh.) trees exhibit seasonal patterns of production, accumulation, and utilization of nonstructural carbohydrates that are closely correlated with phenological events and (or) physiological processes. The simultaneous seasonal patterns of both reserve and soluble carbohydrates in the leaves, twigs, branches, and trunks of healthy mature...

Effect of aminoethoxyvinilglycine (AVG on preharvest fruit drop and maturity of apples

Directory of Open Access Journals (Sweden)

Amarante Cassandro Vidal Talamini do

2002-01-01

Full Text Available Apple trees cultivars Gala and Fuji were sprayed four weeks before commercial harvest with aminoethoxyvinilglycine (AVG, at doses of 0, 125, or 250 mg L-1, and assessed for preharvest fruit drop, fruit growth, and maturation on tree. In 'Gala', 64 days after AVG spraying, fruit drop for control treatment was 85%, and AVG (at 125 and 250 mg L-1 reduced it to 10%. In 'Fuji', 64 days after AVG spraying, fruit drop for control was 6%, while treatments with AVG (at 125 and 250 mg L-1 increased fruit drop to 10%. AVG was a powerful retardant of fruit maturation for 'Gala' but not for 'Fuji'. In 'Gala', the most affected attribute was the skin background color, followed, in decreasing order, by soluble solids content, the starch index, skin red color, the flesh firmness, and titratable acidity. In 'Gala', only flesh firmness retention was improved by increasing AVG dose from 125 mg L-1 to 250 mg L-1. The AVG at 250 mg L-1 inhibited "Gala" late fruit growth but not 'Fuji'.

Environmental fate of emamectin benzoate after tree micro injection of horse chestnut trees.

Science.gov (United States)

Burkhard, Rene; Binz, Heinz; Roux, Christian A; Brunner, Matthias; Ruesch, Othmar; Wyss, Peter

2015-02-01

Emamectin benzoate, an insecticide derived from the avermectin family of natural products, has a unique translocation behavior in trees when applied by tree micro injection (TMI), which can result in protection from insect pests (foliar and borers) for several years. Active ingredient imported into leaves was measured at the end of season in the fallen leaves of treated horse chestnut (Aesculus hippocastanum) trees. The dissipation of emamectin benzoate in these leaves seems to be biphasic and depends on the decomposition of the leaf. In compost piles, where decomposition of leaves was fastest, a cumulative emamectin benzoate degradation half-life time of 20 d was measured. In leaves immersed in water, where decomposition was much slower, the degradation half-life time was 94 d, and in leaves left on the ground in contact with soil, where decomposition was slowest, the degradation half-life time was 212 d. The biphasic decline and the correlation with leaf decomposition might be attributed to an extensive sorption of emamectin benzoate residues to leaf macromolecules. This may also explain why earthworms ingesting leaves from injected trees take up very little emamectin benzoate and excrete it with the feces. Furthermore, no emamectin benzoate was found in water containing decomposing leaves from injected trees. It is concluded, that emamectin benzoate present in abscised leaves from horse chestnut trees injected with the insecticide is not available to nontarget organisms present in soil or water bodies. Published 2014 SETAC.

The Effect of Restoration Treatments on the Spatial Variability of Soil Processes under Longleaf Pine Trees

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John K. Hiers

2012-08-01

Full Text Available The objectives of this study were to (1 characterize tree-based spatial patterning of soil properties and understory vegetation in frequently burned (“reference state” and fire-suppressed longleaf pine forests; and (2 determine how restoration treatments affected patterning. To attain these objectives, we used an experimental manipulation of management types implemented 15 years ago in Florida. We randomly located six mature longleaf pine trees in one reference and four restoration treatments (i.e., burn, control, herbicide, and mechanical, for a total of 36 trees. In addition to the original treatments and as part of a monitoring program, all plots were subjected to several prescribed fires during these 15 years. Under each tree, we sampled mineral soil and understory vegetation at 1 m, 2 m, 3 m and 4 m (vegetation only away from the tree. At these sites, soil carbon and nitrogen were higher near the trunk while graminoids, forbs and saw palmetto covers showed an opposite trend. Our results confirmed that longleaf pine trees affect the spatial patterning of soil and understory vegetation, and this patterning was mostly limited to the restoration sites. We suggest frequent burning as a probable cause for a lack of spatial structure in the “reference state”. We attribute the presence of spatial patterning in the restoration sites to accumulation of organic materials near the base of mature trees.

Fruit load governs transpiration of olive trees.

Science.gov (United States)

Bustan, Amnon; Dag, Arnon; Yermiyahu, Uri; Erel, Ran; Presnov, Eugene; Agam, Nurit; Kool, Dilia; Iwema, Joost; Zipori, Isaac; Ben-Gal, Alon

2016-03-01

We tested the hypothesis that whole-tree water consumption of olives (Olea europaea L.) is fruit load-dependent and investigated the driving physiological mechanisms. Fruit load was manipulated in mature olives grown in weighing-drainage lysimeters. Fruit was thinned or entirely removed from trees at three separate stages of growth: early, mid and late in the season. Tree-scale transpiration, calculated from lysimeter water balance, was found to be a function of fruit load, canopy size and weather conditions. Fruit removal caused an immediate decline in water consumption, measured as whole-plant transpiration normalized to tree size, which persisted until the end of the season. The later the execution of fruit removal, the greater was the response. The amount of water transpired by a fruit-loaded tree was found to be roughly 30% greater than that of an equivalent low- or nonyielding tree. The tree-scale response to fruit was reflected in stem water potential but was not mirrored in leaf-scale physiological measurements of stomatal conductance or photosynthesis. Trees with low or no fruit load had higher vegetative growth rates. However, no significant difference was observed in the overall aboveground dry biomass among groups, when fruit was included. This case, where carbon sources and sinks were both not limiting, suggests that the role of fruit on water consumption involves signaling and alterations in hydraulic properties of vascular tissues and tree organs. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

MRI investigation of normal fetal lung maturation using signal intensities on different imaging sequences

International Nuclear Information System (INIS)

Balassy, Csilla; Kasprian, Gregor; Weber, Michael; Hoermann, Marcus; Prayer, Daniela; Brugger, Peter C.; Csapo, Bence; Mittermayer, Christoph

2007-01-01

To purpose of this paper is to study the relation between normal lung maturation signal and changes in intensity ratios (SIR) and to determine which magnetic resonance imaging sequence provides the strongest correlation of normal lung SIs with gestational age. 126 normal singleton pregnancies (20-37 weeks) were examined with a 1.5 Tesla unit. Mean SIs for lungs, liver, and gastric fluid were assessed on six different sequences, and SIRs of lung/liver (LLSIR) and lung/gastric fluid (LGSIR) were correlated with gestational age for each sequence. To evaluate the feasibility of SIRs in the prediction of the state of the lung maturity, accuracy of the predicted SIRs (D*) was measured by calculating relative residuals (D*-D)/D for each sequence. LLSIRs showed significant changes in every sequence (p<0.05), while LGSIRs only on two sequences. Significant differences were shown for the mean of absolute residuals for both LLSIRs (p<0.001) and for LGSIRs (p=0.003). Relative residuals of LLSIRs were significantly smaller on T1-weighted sequence, whereas they were significantly higher for LGSIRs on FLAIR sequence. Fetal liver seems to be adequate reference for the investigation of lung maturation. T1-weighted sequence was the most accurate for the measurement of the lung SIs; thus, we propose to determine LLSIR on T1-weighted sequence when evaluating lung development. (orig.)

MRI investigation of normal fetal lung maturation using signal intensities on different imaging sequences

Energy Technology Data Exchange (ETDEWEB)

Balassy, Csilla; Kasprian, Gregor; Weber, Michael; Hoermann, Marcus; Prayer, Daniela [Medical University of Vienna, Department of Radiology, Vienna (Austria); Brugger, Peter C. [Medical University of Vienna, Center of Anatomy and Cell Biology, Vienna (Austria); Csapo, Bence [Medical University of Vienna, Department of Obstetrics and Gyneocology, Vienna (Austria); Mittermayer, Christoph [Medical University of Vienna, Department of Pediatrics, Vienna (Austria)

2007-03-15

To purpose of this paper is to study the relation between normal lung maturation signal and changes in intensity ratios (SIR) and to determine which magnetic resonance imaging sequence provides the strongest correlation of normal lung SIs with gestational age. 126 normal singleton pregnancies (20-37 weeks) were examined with a 1.5 Tesla unit. Mean SIs for lungs, liver, and gastric fluid were assessed on six different sequences, and SIRs of lung/liver (LLSIR) and lung/gastric fluid (LGSIR) were correlated with gestational age for each sequence. To evaluate the feasibility of SIRs in the prediction of the state of the lung maturity, accuracy of the predicted SIRs (D*) was measured by calculating relative residuals (D*-D)/D for each sequence. LLSIRs showed significant changes in every sequence (p<0.05), while LGSIRs only on two sequences. Significant differences were shown for the mean of absolute residuals for both LLSIRs (p<0.001) and for LGSIRs (p=0.003). Relative residuals of LLSIRs were significantly smaller on T1-weighted sequence, whereas they were significantly higher for LGSIRs on FLAIR sequence. Fetal liver seems to be adequate reference for the investigation of lung maturation. T1-weighted sequence was the most accurate for the measurement of the lung SIs; thus, we propose to determine LLSIR on T1-weighted sequence when evaluating lung development. (orig.)

Analysis of the relation between the cellulose, hemicellulose and lignin content and the thermal behavior of residual biomass from olive trees.

Science.gov (United States)

Garcia-Maraver, A; Salvachúa, D; Martínez, M J; Diaz, L F; Zamorano, M

2013-11-01

The heterogeneity of biomass makes it difficult if not impossible to make sweeping generalizations concerning thermochemical treatment systems and the optimal equipment to be used in them. Chemical differences in the structural components of the biomass (cellulose, hemicellulose, and lignin) have a direct impact on its chemical reactivity. The aim of this research was to study the influence of the organic components of the raw material from olive trees (leaves, pruning residues, and wood) in the combustion behavior of this biomass, as well as to find the component responsible for the higher ash content of olive leaves. Accordingly, the study used a thermogravimetric analyzer to monitor the different states and complex transitions that occurred in the biomass as the temperature varied. The decomposition rates of the different samples were analyzed in order to establish a link between each combustion phase and the composition of the raw materials. Two methods were used to determine the hemicellulose and cellulose contents of biomass from olive trees. Significant differences among the results obtained by the different methods were observed, as well as important variations regarding the chemical composition and consequently the thermal behavior of the raw materials tested. Copyright © 2013 Elsevier Ltd. All rights reserved.

A lack of cerebral lateralization in schizophrenia is within the normal variation in brain maturation but indicates late, slow maturation.

Science.gov (United States)

Saugstad, L F

1999-10-19

The planum temporale (PT) bias, PT leftward, PT symmetry, and PT rightward reversal and sidedness preference, consistent right-handedness, ambilaterality, and consistent left-handedness are placed on a continuum mirroring the normal variation in rate of brain maturation. Maturational rate declines as we pass from PT leftward bias and consistent right-handedness to PT reversal and consistent left-handedness. Concomitantly, we expect an increased prevalence of males due to their pubertal age being about 2 years later than that of females, and a shift in cognitive profile from higher verbal scores than performance scores on the WAIS to higher performance than verbal scores. Three disorders fulfilling the criteria of late CNS maturation apart from the corresponding cognitive profile were studied: infantile autism (IA), schizophrenia (S), and developmental dyslexia (DD). These disorders have in common deficits in cognition, perception, and somatomotor function. The deficits range from an arrest in brain development (which is evident in infancy superimposed on late maturation in IA) to overall delayed brain and somatic development in S (culminating in postpubertal psychotic episodes and persistent and generalized residual deficits). Finally, reading inability, problems in perception (vision and hearing) and in motor coordination, particularly between the two hemispheres, characterize DD. Enhancing brain maturation and the prevalence of 'normal' cerebral asymmetry--laterality is preferable if we want to reduce the risk of developing the above-mentioned disorders. It is suggested that in the past environmental challenges have favored early maturation, with its abundant neuronal population, arborization and excessive density of synapses and cerebral excitability which has powered evolution through the mechanism of natural selection. Early maturation is obtainable through optimal nutrition, including a satisfactory amount of marine fat (PUFA), before and during pregnancy and

Neighbourhood density and genetic relatedness interact to determine fruit set and abortion rates in a continuous tropical tree population.

Science.gov (United States)

Jones, F A; Comita, L S

2008-12-07

Tropical trees may show positive density dependence in fruit set and maturation due to pollen limitation in low-density populations. However, pollen from closely related individuals in the local neighbourhood might reduce fruit set or increase fruit abortion in self-incompatible tree species. We investigated the role of neighbourhood density and genetic relatedness on individual fruit set and abortion in the neotropical tree Jacaranda copaia in a large forest plot in central Panama. Using nested neighbourhood models, we found a strong positive effect of increased conspecific density on fruit set and maturation. However, high neighbourhood genetic relatedness interacted with density to reduce total fruit set and increase the proportion of aborted fruit. Our results imply a fitness advantage for individuals growing in high densities as measured by fruit set, but realized fruit set is lowered by increased neighbourhood relatedness. We hypothesize that the mechanism involved is increased visitation by density-dependent invertebrate pollinators in high-density populations, which increases pollen quantity and carry-over and increases fruit set and maturation, coupled with self-incompatibility at early and late stages due to biparental inbreeding that lowers fruit set and increases fruit abortion. Implications for the reproductive ecology and conservation of tropical tree communities in continuous and fragmented habitats are discussed.

Differential expression and localization of glycosidic residues in in vitro- and in vivo-matured cumulus-oocyte complexes in equine and porcine species.

Science.gov (United States)

Accogli, Gianluca; Douet, Cécile; Ambruosi, Barbara; Martino, Nicola Antonio; Uranio, Manuel Filioli; Deleuze, Stefan; Dell'Aquila, Maria Elena; Desantis, Salvatore; Goudet, Ghylène

2014-12-01

Glycoprotein oligosaccharides play major roles during reproduction, yet their function in gamete interactions is not fully elucidated. Identification and comparison of the glycan pattern in cumulus-oocyte complexes (COCs) from species with different efficiencies of in vitro spermatozoa penetration through the zona pellucida (ZP) could help clarify how oligosaccharides affect gamete interactions. We compared the expression and localization of 12 glycosidic residues in equine and porcine in vitro-matured (IVM) and preovulatory COCs by means of lectin histochemistry. The COCs glycan pattern differed between animals and COC source (IVM versus preovulatory). Among the 12 carbohydrate residues investigated, the IVM COCs from these two species shared: (a) sialo- and βN-acetylgalactosamine (GalNAc)-terminating glycans in the ZP; (b) sialylated and fucosylated glycans in cumulus cells; and (c) GalNAc and N-acetylglucosamine (GlcNAc) glycans in the ooplasm. Differences in the preovulatory COCs of the two species included: (a) sialoglycans and GlcNAc terminating glycans in the equine ZP versus terminal GalNAc and internal GlcNAc in the porcine ZP; (b) terminal galactosides in equine cumulus cells versus terminal GlcNAc and fucose in porcine cohorts; and (c) fucose in the mare ooplasm versus lactosamine and internal GlcNAc in porcine oocyte cytoplasm. Furthermore, equine and porcine cumulus cells and oocytes contributed differently to the synthesis of ZP glycoproteins. These results could be attributed to the different in vitro fertilization efficiencies between these two divergent, large-animal models. © 2014 Wiley Periodicals, Inc.

Transcriptional signatures in leaves of adult European beech trees (Fagus sylvatica L.) in an experimentally enhanced free air ozone setting

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Olbrich, Maren, E-mail: maren.olbrich@helmholtz-muenchen.d [Institute of Biochemical Plant Pathology, Helmholtz Zentrum Muenchen - German Research Center for Environmental Health, 85764 Neuherberg (Germany); Gerstner, Elke; Bahnweg, Guenther [Institute of Biochemical Plant Pathology, Helmholtz Zentrum Muenchen - German Research Center for Environmental Health, 85764 Neuherberg (Germany); Haeberle, Karl-Heinz; Matyssek, Rainer [Technische Universitaet Muenchen, Ecophysiology of Plants, Am Hochanger 13, 85354 Freising (Germany); Welzl, Gerhard [Institute of Developmental Genetics, Helmholtz Zentrum Muenchen - German Research Center for Environmental Health, 85764 Neuherberg (Germany); Heller, Werner; Ernst, Dieter [Institute of Biochemical Plant Pathology, Helmholtz Zentrum Muenchen - German Research Center for Environmental Health, 85764 Neuherberg (Germany)

2010-04-15

Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses were conducted on leaves from trees grown in the field under ambient and twice-ambient ozone concentrations at Kranzberger Forst (Bavaria). Beech trees changed their transcript levels in response to ozone. In the years 2005 and 2006 different transcription patterns were observed; this may have been a result of different weather conditions and ozone uptake. Furthermore, we obtained differences in mRNA expression patterns between shade and sun leaves. In the ozone-treated sun leaves of 2005, slightly up- and down-regulated transcript levels were detected, particularly in the spring and autumn, whereas shade leaves clearly exhibited reduced mRNA levels, particularly at the end of the vegetation period. In 2006, this pattern could not be confirmed, and in the autumn, four other transcripts were slightly up-regulated in ozone-treated shade leaves. In addition, two other transcripts were found to be influenced in sun leaves in the spring/summer. While we detected changes in the levels of only a few transcripts, the observed effects were not identical in both years. In conclusion, elevated ozone exhibited very small influence on the transcription levels of genes of mature beech trees. - At the transcriptional level, leaves of mature beech trees barely react to double ambient ozone concentrations; differences are detected primarily between sun/shade leaves and between different growing seasons.

Transcriptional signatures in leaves of adult European beech trees (Fagus sylvatica L.) in an experimentally enhanced free air ozone setting

International Nuclear Information System (INIS)

Olbrich, Maren; Gerstner, Elke; Bahnweg, Guenther; Haeberle, Karl-Heinz; Matyssek, Rainer; Welzl, Gerhard; Heller, Werner; Ernst, Dieter

2010-01-01

Tropospheric ozone causes severe oxidative stress in plants. To investigate the transcriptional responsiveness of adult trees to ozone, fully-expanded sun and shade leaves of mature beech trees were harvested at four time points over the entire vegetation period in 2005 and 2006. Microarray analyses were conducted on leaves from trees grown in the field under ambient and twice-ambient ozone concentrations at Kranzberger Forst (Bavaria). Beech trees changed their transcript levels in response to ozone. In the years 2005 and 2006 different transcription patterns were observed; this may have been a result of different weather conditions and ozone uptake. Furthermore, we obtained differences in mRNA expression patterns between shade and sun leaves. In the ozone-treated sun leaves of 2005, slightly up- and down-regulated transcript levels were detected, particularly in the spring and autumn, whereas shade leaves clearly exhibited reduced mRNA levels, particularly at the end of the vegetation period. In 2006, this pattern could not be confirmed, and in the autumn, four other transcripts were slightly up-regulated in ozone-treated shade leaves. In addition, two other transcripts were found to be influenced in sun leaves in the spring/summer. While we detected changes in the levels of only a few transcripts, the observed effects were not identical in both years. In conclusion, elevated ozone exhibited very small influence on the transcription levels of genes of mature beech trees. - At the transcriptional level, leaves of mature beech trees barely react to double ambient ozone concentrations; differences are detected primarily between sun/shade leaves and between different growing seasons.

The effect of gamma irradiation on in vitro digestible energy of some agricultural residues

International Nuclear Information System (INIS)

Al-Masri, M.R.

1993-03-01

Experiments have been carried out on the effect of gamma irradiation on total energy, dry organic matter digestibility and on digestible energy of organic matter for some agricultural residues (maize straw, lentils straw, cottonwood, residues of apple-tree pruning, olive-cake first and second treatment). Sample were irradiated at 0, 50 and 100 KGy. Total energy was estimated by calorimeter. Digestibility was estimated in vitro by the method of Tilly and Terry (1963). Two sheep with rumen fistula were used as rumen liquor donating animals. Irradiation resulted in increasing the digestion of organic and dry matter and also the digestible energy of organic matter in all residues used except lentils straw and olive-cake first treatment. The increase in digestible energy values of organic matter (kJ) at dose of 100 KGy were: 155, 105, 71 and 25 for residue of apple-tree pruning, maize straw, cottonwood and olive-cake second treatment, respectively. (author).28 refs., 10 figs., 5 tabs

Estimation of beech tree transpiration in relation to their social status in forest stand

International Nuclear Information System (INIS)

Střelcová, K.; Matejka, F.; Minďáš, J.

2002-01-01

The results of sap flow continuous measurements by a tree-trunk heat balance method (THB) on beech model trees are analysed in this paper. Experimental research works were carried out in a mature mixed fir-spruce-beech stand in the research area Pol'ana - Hukavský Grúň (φ = 48°39', λ = 19°29', H = 850 m a.s.l.) in UNESCO Biosphere Reserve on two co-dominant and one sub-dominant beech trees. A mathematical model of daily transpiration dynamics was proposed for a quantitative analysis of the daily course of sap flow intensity. The model works on a one-tree level and enables to consider the influence of the tree social position in the stand on the sap flow intensity of model beech trees and to express the dependence of sap flow intensity on the tree height and crown projection

Needle age and season influence photosynthetic temperature response and total annual carbon uptake in mature Picea mariana trees

Science.gov (United States)

Jensen, Anna M.; Warren, Jeffrey M.; Hanson, Paul J.; Childs, Joanne; Wullschleger, Stan D.

2015-01-01

Background and Aims The carbon (C) balance of boreal terrestrial ecosystems is sensitive to increasing temperature, but the direction and thresholds of responses are uncertain. Annual C uptake in Picea and other evergreen boreal conifers is dependent on seasonal- and cohort-specific photosynthetic and respiratory temperature response functions, so this study examined the physiological significance of maintaining multiple foliar cohorts for Picea mariana trees within an ombrotrophic bog ecosystem in Minnesota, USA. Methods Measurements were taken on multiple cohorts of needles for photosynthetic capacity, foliar respiration (Rd) and leaf biochemistry and morphology of mature trees from April to October over 4 years. The results were applied to a simple model of canopy photosynthesis in order to simulate annual C uptake by cohort age under ambient and elevated temperature scenarios. Key Results Temperature responses of key photosynthetic parameters [i.e. light-saturated rate of CO2 assimilation (Asat), rate of Rubisco carboxylation (Vcmax) and electron transport rate (Jmax)] were dependent on season and generally less responsive in the developing current-year (Y0) needles compared with 1-year-old (Y1) or 2-year-old (Y2) foliage. Temperature optimums ranged from 18·7 to 23·7, 31·3 to 38·3 and 28·7 to 36·7 °C for Asat, Vcmax and Jmax, respectively. Foliar cohorts differed in their morphology and photosynthetic capacity, which resulted in 64 % of modelled annual stand C uptake from Y1&2 cohorts (LAI 0·67 m2 m−2) and just 36 % from Y0 cohorts (LAI 0·52 m2 m−2). Under warmer climate change scenarios, the contribution of Y0 cohorts was even less; e.g. 31 % of annual C uptake for a modelled 9 °C rise in mean summer temperatures. Results suggest that net annual C uptake by P. mariana could increase under elevated temperature, and become more dependent on older foliar cohorts. Conclusions Collectively, this study illustrates the physiological and

Initial responses of rove and ground beetles (Coleoptera, Staphylinidae, Carabidae) to removal of logging residues following clearcut harvesting in the boreal forest of Quebec, Canada.

Science.gov (United States)

Work, Timothy T; Klimaszewski, Jan; Thiffault, Evelyne; Bourdon, Caroline; Paré, David; Bousquet, Yves; Venier, Lisa; Titus, Brian

2013-01-01

Increased interest in biomass harvesting for bioenergetic applications has raised questions regarding the potential ecological consequences on forest biodiversity. Here we evaluate the initial changes in the abundance, species richness and community composition of rove (Staphylinidae) and ground beetles (Carabidae), immediately following 1) stem-only harvesting (SOH), in which logging debris (i.e., tree tops and branches) are retained on site, and 2) whole-tree harvesting (WTH), in which stems, tops and branches are removed in mature balsam fir stands in Quebec, Canada. Beetles were collected throughout the summer of 2011, one year following harvesting, using pitfall traps. Overall catch rates were greater in uncut forest (Control) than either stem-only or whole-tree harvested sites. Catch rates in WTH were greater than SOH sites. Uncut stands were characterized primarily by five species: Atheta capsularis, Atheta klagesi, Atheta strigosula, Tachinus fumipennis/frigidus complex (Staphylinidae) and to a lesser extent to Pterostichus punctatissimus(Carabidae). Increased catch rates in WTH sites, where post-harvest biomass was less, were attributable to increased catches of rove beetles Pseudopsis subulata, Quedius labradorensis and to a lesser extent Gabrius brevipennis. We were able to characterize differences in beetle assemblages between harvested and non-harvested plots as well as differences between whole tree (WTH) and stem only (SOH) harvested sites where logging residues had been removed or left following harvest. However, the overall assemblage response was largely a recapitulation of the responses of several abundant species.

Initial responses of rove and ground beetles (Coleoptera, Staphylinidae, Carabidae to removal of logging residues following clearcut harvesting in the boreal forest of Quebec, Canada

Directory of Open Access Journals (Sweden)

Timothy Work

2013-01-01

Full Text Available Increased interest in biomass harvesting for bioenergetic applications has raised questions regarding the potential ecological consequences on forest biodiversity. Here we evaluate the initial changes in the abundance, species richness and community composition of rove (Staphylinidae and ground beetles (Carabidae, immediately following 1 stem-only harvesting (SOH, in which logging debris (i.e., tree tops and branches are retained on site, and 2 whole-tree harvesting (WTH, in which stems, tops and branches are removed in mature balsam fir stands in Quebec, Canada. Beetles were collected throughout the summer of 2011, one year following harvesting, using pitfall traps. Overall catch rates were greater in uncut forest (Control than either stem-only or whole-tree harvested sites. Catch rates in WTH were greater than SOH sites. Uncut stands were characterized primarily by five species: Atheta capsularis, A. klagesi, A. strigosula, Tachinus fumipennis/frigidus complex (Staphylinidae and to a lesser extent to Pterostichus punctatissimus (Carabidae. Increased catch rates in WTH sites, where post-harvest biomass was less, were attributable to increased catches of rove beetles Pseudopsis subulata, Quedius labradorensis and to a lesser extent Gabrius brevipennis. We were able to characterize differences in beetle assemblages between harvested and non-harvested plots as well as differences between whole tree (WTH and stem only (SOH harvested sites where logging residues had been removed or left following harvest. However, the overall assemblage response was largely a recapitulation of the responses of several abundant species.

Microclimate, Water Potential, Transpiration, and Bole Dielectric Constant of Coniferous and Deciduous Tree Species in the Continental Boreal Ecotone of Central Alaska

Science.gov (United States)

Zimmermann, R.; McDonald, K.; Way, J.; Oren, R.

1994-01-01

Tree canopy microclimate, xylem water flux and xylem dielectric constant have been monitored in situ since June 1993 in two adjacent natural forest stands in central Alaska. The deciduous stand represents a mature balsam poplar site on the Tanana River floodplain, while the coniferous stand consists of mature white spruce with some black spruce mixed in. During solstice in June and later in summer, diurnal changes of xylem water potential were measured to investigate the occurrence and magnitude of tree transpiration and dielectric constant changes in stems.

The future of large old trees in urban landscapes.

Science.gov (United States)

Le Roux, Darren S; Ikin, Karen; Lindenmayer, David B; Manning, Adrian D; Gibbons, Philip

2014-01-01

Large old trees are disproportionate providers of structural elements (e.g. hollows, coarse woody debris), which are crucial habitat resources for many species. The decline of large old trees in modified landscapes is of global conservation concern. Once large old trees are removed, they are difficult to replace in the short term due to typically prolonged time periods needed for trees to mature (i.e. centuries). Few studies have investigated the decline of large old trees in urban landscapes. Using a simulation model, we predicted the future availability of native hollow-bearing trees (a surrogate for large old trees) in an expanding city in southeastern Australia. In urban greenspace, we predicted that the number of hollow-bearing trees is likely to decline by 87% over 300 years under existing management practices. Under a worst case scenario, hollow-bearing trees may be completely lost within 115 years. Conversely, we predicted that the number of hollow-bearing trees will likely remain stable in semi-natural nature reserves. Sensitivity analysis revealed that the number of hollow-bearing trees perpetuated in urban greenspace over the long term is most sensitive to the: (1) maximum standing life of trees; (2) number of regenerating seedlings ha(-1); and (3) rate of hollow formation. We tested the efficacy of alternative urban management strategies and found that the only way to arrest the decline of large old trees requires a collective management strategy that ensures: (1) trees remain standing for at least 40% longer than currently tolerated lifespans; (2) the number of seedlings established is increased by at least 60%; and (3) the formation of habitat structures provided by large old trees is accelerated by at least 30% (e.g. artificial structures) to compensate for short term deficits in habitat resources. Immediate implementation of these recommendations is needed to avert long term risk to urban biodiversity.

Effect of thermal modification on the physical properties of juvenile and mature woods of Eucalyptus grandis

Directory of Open Access Journals (Sweden)

Fred Willians Calonego

Full Text Available This study aimed to evaluate the effect of thermal treatment on the physical properties of juvenile and mature woods of Eucalyptus grandis. Boards were taken from 30-year-old E. grandis trees. The boards were thermally modified at 180 °C in the Laboratory of Wood Drying and Preservation at UNESP, Botucatu, Sao Paulo state, Brazil. The results showed that thermal modification caused: (1 decrease of 6.8% in the density at 0% equilibrium moisture content of mature wood; (2 significant decreases of 14.7% and 35.6% in the maximum volumetric swellings of juvenile and mature woods, respectively; (3 significant decreases of 13.7% and 21.3% in the equilibrium moisture content of juvenile and mature woods, respectively. The influence of thermal modification in juvenile wood was lower than in mature wood and caused greater uniformity in the physical variations between these types of wood in E. grandis.

Disparate effects of global-change drivers on mountain conifer forests: warming-induced growth enhancement in young trees vs. CO2 fertilization in old trees from wet sites.

Science.gov (United States)

Camarero, J Julio; Gazol, Antonio; Galván, Juan Diego; Sangüesa-Barreda, Gabriel; Gutiérrez, Emilia

2015-02-01

Theory predicts that the postindustrial rise in the concentration of CO2 in the atmosphere (c(a)) should enhance tree growth either through a direct fertilization effect or indirectly by improving water use efficiency in dry areas. However, this hypothesis has received little support in cold-limited and subalpine forests where positive growth responses to either rising ca or warmer temperatures are still under debate. In this study, we address this issue by analyzing an extensive dendrochronological network of high-elevation Pinus uncinata forests in Spain (28 sites, 544 trees) encompassing the whole biogeographical extent of the species. We determine if the basal area increment (BAI) trends are linked to climate warming and increased c(a) by focusing on region- and age-dependent responses. The largest improvement in BAI over the past six centuries occurred during the last 150 years affecting young trees and being driven by recent warming. Indeed, most studied regions and age classes presented BAI patterns mainly controlled by temperature trends, while growing-season precipitation was only relevant in the driest sites. Growth enhancement was linked to rising ca in mature (151-300 year-old trees) and old-mature trees (301-450 year-old trees) from the wettest sites only. This finding implies that any potential fertilization effect of elevated c(a) on forest growth is contingent on tree features that vary with ontogeny and it depends on site conditions (for instance water availability). Furthermore, we found widespread growth decline in drought-prone sites probably indicating that the rise in ca did not compensate for the reduction in water availability. Thus, warming-triggered drought stress may become a more important direct driver of growth than rising ca in similar subalpine forests. We argue that broad approaches in biogeographical and temporal terms are required to adequately evaluate any effect of rising c(a) on forest growth. © 2014 John Wiley & Sons Ltd.

The effect of gamma irradiation on crude fibre NDF, ADF, and ADL of some Syrian agricultural residues

International Nuclear Information System (INIS)

Al-Masri, M.R.; Zarkawi, M.

1992-07-01

The effects of 150 KGy of gamma irradiation on crude fibre and its main components (cellulose, hemicellulose-cellulose and lignin) and on neutral detergent fibre (NDF), acid detergent lignin (ADL), and acid detergent fibre (ADF) were investigated. The results indicate that gamma irradiation decreased Cf content by 30%, 28%, 29%, and 17% for cottonwood, lentils straw, apple-tree pruning products and olive-oil cake, respectively. NDF values also decreased by 5%, 23%, 13% and 3% for, cottonwood, lentils straw, olive-oil cake and apple-tree pruning products respectively. Gamma irradiation (150 KGy) had no effects on ADF and ADL for lentils straw, apple-tree pruning products and olive-oil cake whereas, ADF decreased by 8.5% and ADL by 8.3 for cottonwood. Hemicellulose content increased by 12% for cottonwood while decreased by 54% for lentils straw and by 33% for apple-tree pruning products with no effects for olive-oil cake. Cellulose content decreased by 8.6% for cottonwood whereas no effects for the remaining residues were seen. Gamma irradiation treatment improved the nutritive value of the agriculture residues examined. The reduction in crude fibre content varies with the residue. (author). 15 refs., 5 tabs

Residual life estimation of electrical insulation system for rotating equipment

International Nuclear Information System (INIS)

Vashishtha, Y.D.; Gupta, A.K.; Bhattacharyya, A.K.; Verma, A.K.

1994-01-01

Residual life assessment gains significance towards the end of designed life for granting plant life extensions and resource planning for costly equipment replacement. A critical review of all the diagnostic techniques presently used to assess either health of insulation system or to infer qualitatively the remaining life for rotating machines is presented. However more emphasis is required on developing quantitative methods. This paper also formulates the experimental plan for progressively censored ageing tests, measurement of partial discharge parameters, micro-structural study for delamination and electrical tree growth and measurement of electrical breakdown strength. Partial discharge (PD) patterns, electrical tree growth and time to failure data shall be taken as training set for the neural network learning which can be useful to predict residual life with only one candidate parameter i.e. PD patterns. (author). 9 refs

Abrupt fire regime change may cause landscape-wide loss of mature obligate seeder forests.

Science.gov (United States)

Bowman, David M J S; Murphy, Brett P; Neyland, Dominic L J; Williamson, Grant J; Prior, Lynda D

2014-03-01

Obligate seeder trees requiring high-severity fires to regenerate may be vulnerable to population collapse if fire frequency increases abruptly. We tested this proposition using a long-lived obligate seeding forest tree, alpine ash (Eucalyptus delegatensis), in the Australian Alps. Since 2002, 85% of the Alps bioregion has been burnt by several very large fires, tracking the regional trend of more frequent extreme fire weather. High-severity fires removed 25% of aboveground tree biomass, and switched fuel arrays from low loads of herbaceous and litter fuels to high loads of flammable shrubs and juvenile trees, priming regenerating stands for subsequent fires. Single high-severity fires caused adult mortality and triggered mass regeneration, but a second fire in quick succession killed 97% of the regenerating alpine ash. Our results indicate that without interventions to reduce fire severity, interactions between flammability of regenerating stands and increased extreme fire weather will eliminate much of the remaining mature alpine ash forest. © 2013 John Wiley & Sons Ltd.

Importance of the content and localization of tyrosine residues for thyroxine formation within the N-terminal part of human thyroglobulin

NARCIS (Netherlands)

den Hartog, M. T.; Sijmons, C. C.; Bakker, O.; Ris-Stalpers, C.; de Vijlder, J. J.

1995-01-01

Thyroxine (T4) is formed by coupling of iodinated tyrosine residues within thyroglobulin (TG). In mature TG, some iodinated tyrosine residues are involved preferentially in T4 formation. In order to investigate the specific role of various tyrosine residues in T4 formation, N-terminal TG fragments

Water-Stressed Loquat Trees Need More Time and Heat to Ripen Their Fruits

Directory of Open Access Journals (Sweden)

Julián Cuevas

2018-06-01

Full Text Available To determine if water-stressed trees need more time and heat to mature their fruits, we compared chronological and thermal time from bloom to harvest among control fully-irrigated ‘Algerie’ loquat trees and trees suffering prior-to-bloom deficit irrigation (DI. Heat requirement calculation was performed using the double sine method with a lower threshold temperature of 3 °C. The results show that the greater the blooming advancement achieved by DI, the longer the period to mature the fruits. Such a pattern indicates that the longer duration for bloom-harvest period under DI is due to a displacement of the reproductive phenology to cooler dates. However, some effects of DI on heat requirements for ripening persist, indicating a slower fruit development in some, but not all, DI treatments. The differences in fruit development rate between fully-irrigated and water-stressed trees were established during the phase of rapid fruit growth. The comparison of water stress effects on sink (flower size and seed number and source (leaf number and size, gas exchange and mineral and carbohydrate nutrition of DI treatments seems to indicate that the amount of stored reserves in the leaves to sustain early fruit development is the most plausible reason behind the increase in thermal time between bloom and harvest in water-stressed loquats.

Correlation between dental maturity and cervical vertebral maturity.

Science.gov (United States)

Chen, Jianwei; Hu, Haikun; Guo, Jing; Liu, Zeping; Liu, Renkai; Li, Fan; Zou, Shujuan

2010-12-01

The aim of this study was to investigate the association between dental and skeletal maturity. Digital panoramic radiographs and lateral skull cephalograms of 302 patients (134 boys and 168 girls, ranging from 8 to 16 years of age) were examined. Dental maturity was assessed by calcification stages of the mandibular canines, first and second premolars, and second molars, whereas skeletal maturity was estimated by the cervical vertebral maturation (CVM) stages. The Spearman rank-order correlation coefficient was used to measure the association between CVM stage and dental calcification stage of individual teeth. The mean chronologic age of girls was significantly lower than that of boys in each CVM stage. The Spearman rank-order correlation coefficients between dental maturity and cervical vertebral maturity ranged from 0.391 to 0.582 for girls and from 0.464 to 0.496 for boys (P cervical vertebral maturation stage. The development of the mandibular second molar in females and that of the mandibular canine in males had the strongest correlations with cervical vertebral maturity. Therefore, it is practical to consider the relationship between dental and skeletal maturity when planning orthodontic treatment. Copyright © 2010 Mosby, Inc. All rights reserved.

{alpha}{sub v}{beta}{sub 3} imaging can accurately distinguish between mature teratoma and necrosis in {sup 18}F-FDG-negative residual masses after treatment of non-seminomatous testicular cancer: a preclinical study

Energy Technology Data Exchange (ETDEWEB)

Aide, Nicolas [Francois Baclesse Cancer Centre and Caen University, Bioticla Team, EA1772, IFR 146 ICORE, GRECAN, Caen (France); Caen University Hospital and Francois Baclesse Cancer Centre, PET Unit, Caen (France); Centre Francois Baclesse, Service de Medecine Nucleaire, Caen (France); Briand, Melanie; Dutoit, Soizic; Deslandes, Edwiges; Poulain, Laurent [Francois Baclesse Cancer Centre and Caen University, Bioticla Team, EA1772, IFR 146 ICORE, GRECAN, Caen (France); Bohn, Pierre; Rouvet, Jean; Modzelewski, Romain; Vera, Pierre [Henri Becquerel Cancer Center and Rouen University Hospital and QuantIF- LITIS (EA4108), Department of Nuclear Medicine, Rouen (France); Lasnon, Charline [Caen University Hospital and Francois Baclesse Cancer Centre, PET Unit, Caen (France); Chasle, Jacques [Francois Baclesse Cancer Centre and Caen University, Pathology Department, Caen (France); Vela, Antony [Francois Baclesse Cancer Centre and Caen University, Radiophysics Unit, Caen (France); Carreiras, Franck [Universite de Cergy Pontoise, UFR Sciences et Techniques, ERRMECe, EA 1391, Institut des materiaux, Cergy-Pontoise (France)

2011-02-15

We assessed whether imaging {alpha}{sub v}{beta}{sub 3} integrin could distinguish mature teratoma from necrosis in human non-seminomatous germ cell tumour (NSGCT) post-chemotherapy residual masses. Human embryonal carcinoma xenografts (six/rat) were untreated (controls) or treated to form mature teratomas with low-dose cisplatin and all-trans retinoic acid (ATRA) over a period of 8 weeks. In another group, necrosis was induced in xenografts with high-dose cisplatin plus etoposide (two cycles).{sup 18}F-Fluorodeoxyglucose ({sup 18}F-FDG) small animal positron emission tomography (SA PET) imaging was performed in three rats (one control and two treated for 4 and 8 weeks with cisplatin+ATRA). Imaging of {alpha}{sub v}{beta}{sub 3} expression was performed in six rats bearing mature teratomas and two rats with necrotic lesions on a microSPECT/CT device after injection of the tracer [{sup 99m}Tc]HYNIC-RGD [6-hydrazinonicotinic acid conjugated to cyclo(Arg-Gly-Asp-D-Phe-Lys)]. Correlative immunohistochemistry studies of human and mouse {alpha}{sub v}{beta}{sub 3} expression were performed. Cisplatin+ATRA induced differentiation of the xenografts. After 8 weeks, some glandular structures and mesenchymal cells were visible; in contrast, control tumours showed undifferentiated tissues. SA PET imaging showed that mature teratoma had very low avidity for {sup 18}F-FDG [mean standardised uptake value (SUV{sub mean}) = 0.48 {+-} 0.05] compared to untreated embryonal carcinoma (SUV{sub mean} = 0.92 {+-} 0.13) (p = 0.005). {alpha}{sub v}{beta}{sub 3} imaging accurately distinguished mature teratoma (tumour to muscle ratio = 4.29 {+-} 1.57) from necrosis (tumour to muscle ratio = 1.3 {+-} 0.26) (p = 0.0002). Immunohistochemistry studies showed that {alpha}{sub v}{beta}{sub 3} integrin expression was strong in the glandular structures of mature teratoma lesions and negative in host stroma. Imaging {alpha}{sub v}{beta}{sub 3} integrin accurately distinguished mature teratoma from

Non-stationary Bias Correction of Monthly CMIP5 Temperature Projections over China using a Residual-based Bagging Tree Model

Science.gov (United States)

Yang, T.; Lee, C.

2017-12-01

The biases in the Global Circulation Models (GCMs) are crucial for understanding future climate changes. Currently, most bias correction methodologies suffer from the assumption that model bias is stationary. This paper provides a non-stationary bias correction model, termed Residual-based Bagging Tree (RBT) model, to reduce simulation biases and to quantify the contributions of single models. Specifically, the proposed model estimates the residuals between individual models and observations, and takes the differences between observations and the ensemble mean into consideration during the model training process. A case study is conducted for 10 major river basins in Mainland China during different seasons. Results show that the proposed model is capable of providing accurate and stable predictions while including the non-stationarities into the modeling framework. Significant reductions in both bias and root mean squared error are achieved with the proposed RBT model, especially for the central and western parts of China. The proposed RBT model has consistently better performance in reducing biases when compared to the raw ensemble mean, the ensemble mean with simple additive bias correction, and the single best model for different seasons. Furthermore, the contribution of each single GCM in reducing the overall bias is quantified. The single model importance varies between 3.1% and 7.2%. For different future scenarios (RCP 2.6, RCP 4.5, and RCP 8.5), the results from RBT model suggest temperature increases of 1.44 ºC, 2.59 ºC, and 4.71 ºC by the end of the century, respectively, when compared to the average temperature during 1970 - 1999.

Biophysical modelling of intra-ring variations in tracheid features and wood density of Pinus pinaster trees exposed to seasonal droughts

Science.gov (United States)

Sarah Wilkinson; Jerome Ogee; Jean-Christophe Domec; Mark Rayment; Lisa Wingate

2015-01-01

Process-based models that link seasonally varying environmental signals to morphological features within tree rings are essential tools to predict tree growth response and commercially important wood quality traits under future climate scenarios. This study evaluated model portrayal of radial growth and wood anatomy observations within a mature maritime pine (Pinus...

Characterising root density of peach trees in a semi-arid Chernozem to increase plant density

Science.gov (United States)

Paltineanu, Cristian; Septar, Leinar; Gavat, Corina; Chitu, Emil; Oprita, Alexandru; Moale, Cristina; Calciu, Irina; Vizitiu, Olga; Lamureanu, Gheorghe

2016-01-01

The available information on root system in fully mature peach orchards in semi-arid regions is insufficient. This paper presents a study on the root system density in an irrigated peach orchard from Dobrogea, Romania, using the trench technique. The old orchard has clean cultivation in inter-row and in-row. The objectives of the study were to: test the hypothesis that the roots of fully mature peach trees occupy the whole soil volume; find out if root repulsive effect of adjacent plants occurred for the rootstocks and soil conditions; find relationships between root system and soil properties and analyse soil state trend. Some soil physical properties were significantly deteriorated in inter-row versus in-row, mainly due to soil compaction induced by technological traffic. Density of total roots was higher in-row than inter-row, but the differences were not significant. Root density decreased more intensely with soil depth than with distance from tree trunks. Root density correlated with some soil properties. No repulsive effect of the roots of adjacent peach trees was noted. The decrease of root density with distance from trunk can be used in optimising tree arrangement. The conclusions could also be used in countries with similar growth conditions.

Vertical and horizontal root distribution of mature aspen clones: mechanisms for resource acquisition

Science.gov (United States)

Landhäusser, S. M.; Snedden, J.; Silins, U.; Devito, K. J.

2012-04-01

Spatial root distribution, root morphology, and intra- and inter-clonal connections of mature boreal trembling aspen clones (Populus tremuloides Michx.) were explored to shed light on the functional relationships between vertical and horizontal distribution of roots and the variation in soil water availability along hill slopes. Root systems of mature aspen were hydraulically excavated in large plots (6 m wide and 12 m long) and to a depth of 30 cm. Most aspen roots were located in the upper 20 cm of the soil and fine and coarse root occupancy was highest in the lower slope positions and lowest towards the upper hill slope position likely because of soil moisture availability. Observation of the root system distribution along the hill slope correlated well with the observation of greater leaf area carried by trees growing at the lower portion of the hill slope. Interestingly, trees growing at the bottom of the slope required also less sapwood area to support the same amount of leaf area of trees growing at the top of a slope. These observations appear to be closely related to soil moisture availability and with that greater productivity at the bottom of the slope. However, trees growing on the upper slope tended to have long lateral roots extending downslope, which suggests long distance water transport through these lateral feeder roots. Genetic analysis indicated that both intra- and inter-clonal root connections occur in aspen, which can play a role in the sharing of resources along moisture gradients. Root systems of boreal aspen growing on upper slope positions exhibited a combination of three attributes (1) asymmetric lateral root systems, that are skewed downslope, (2) deeper taproots, and (3) intra and inter-clonal root connections, which can all be considered adaptive strategies to avoid drought stress in upper slope positions.

In vitro biological activity of tannins from Acacia and other tree fruits ...

African Journals Online (AJOL)

This study was designed to investigate impact of tannins on in vitro ruminal fermentation parameters as well as relationships between concentration and in vitro biological activity of tannins present in tree fruits. Dry and mature fruits of known phenolic content harvested from Acacia nilotica, A. erubescens, A. erioloba, ...

Maturity and maturity models in lean construction

Directory of Open Access Journals (Sweden)

Claus Nesensohn

2014-03-01

Full Text Available In recent years there has been an increasing interest in maturity models in management-related disciplines; which reflects a growing recognition that becoming more mature and having a model to guide the route to maturity can help organisations in managing major transformational change. Lean Construction (LC is an increasingly important improvement approach that organisations seek to embed. This study explores how to apply the maturity models to LC. Hence the attitudes, opinions and experiences of key industry informants with high levels of knowledge of LC were investigated. To achieve this, a review of maturity models was conducted, and data for the analysis was collected through a sequential process involving three methods. First a group interview with seven key informants. Second a follow up discussion with the same individuals to investigate some of the issues raised in more depth. Third an online discussion held via LinkedIn in which members shared their views on some of the results. Overall, we found that there is a lack of common understanding as to what maturity means in LC, though there is general agreement that the concept of maturity is a suitable one to reflect the path of evolution for LC within organisations.

Ten-Year Performance of Eastern White Pine - under a Crop Tree Release Regime on an Outwash Site

Science.gov (United States)

Kenneth M. Desmarais; William B. Leak; William B. Leak

2005-01-01

A young stand of eastern white pine aged 38-40 years received a crop tree release cutting reducing stocking to 100 tree/ac. This stocking level reflects the number of sterms per acre that would be contained in a well stocked mature stand at final harvest (20-in. quadratic mean stand diameter). The stand then was monitored for growth and value change. Stems that grew...

Influence of water deficit on the molecular responses of Pinus contorta × Pinus banksiana mature trees to infection by the mountain pine beetle fungal associate, Grosmannia clavigera.

Science.gov (United States)

Arango-Velez, Adriana; González, Leonardo M Galindo; Meents, Miranda J; El Kayal, Walid; Cooke, Barry J; Linsky, Jean; Lusebrink, Inka; Cooke, Janice E K

2014-11-01

Conifers exhibit a number of constitutive and induced mechanisms to defend against attack by pests and pathogens such as mountain pine beetle (Dendroctonus ponderosae Hopkins) and their fungal associates. Ecological studies have demonstrated that stressed trees are more susceptible to attack by mountain pine beetle than their healthy counterparts. In this study, we tested the hypothesis that water deficit affects constitutive and induced responses of mature lodgepole pine × jack pine hybrids (Pinus contorta Dougl. ex Loud. var. latifolia Engelm. ex S. Wats. × Pinus banksiana Lamb.) to inoculation with the mountain pine beetle fungal associate Grosmannia clavigera (Robinson-Jeffrey and Davidson) Zipfel, de Beer and Wingfield. The degree of stress induced by the imposed water-deficit treatment was sufficient to reduce photosynthesis. Grosmannia clavigera-induced lesions exhibited significantly reduced dimensions in water-deficit trees relative to well-watered trees at 5 weeks after inoculation. Treatment-associated cellular-level changes in secondary phloem were also observed. Quantitative RT-PCR was used to analyze transcript abundance profiles of 18 genes belonging to four families classically associated with biotic and abiotic stress responses: aquaporins (AQPs), dehydration-responsive element binding (DREB), terpene synthases (TPSs) and chitinases (CHIs). Transcript abundance profiles of a TIP2 AQP and a TINY-like DREB decreased significantly in fungus-inoculated trees, but not in response to water deficit. One TPS, Pcb(+)-3-carene synthase, and the Class II CHIs PcbCHI2.1 and PcbCHI2.2 showed increased expression under water-deficit conditions in the absence of fungal inoculation, while another TPS, Pcb(E)-β-farnesene synthase-like, and two CHIs, PcbCHI1.1 and PcbCHI4.1, showed attenuated expression under water-deficit conditions in the presence of fungal inoculation. The effects were observed both locally and systemically. These results demonstrate

A non-catalytic histidine residue influences the function of the metalloprotease of Listeria monocytogenes.

Science.gov (United States)

Forster, Brian M; Bitar, Alan Pavinski; Marquis, Hélène

2014-01-01

Mpl, a thermolysin-like metalloprotease, and PC-PLC, a phospholipase C, are synthesized as proenzymes by the intracellular bacterial pathogen Listeria monocytogenes. During intracellular growth, L. monocytogenes is temporarily confined in a membrane-bound vacuole whose acidification leads to Mpl autolysis and Mpl-mediated cleavage of the PC-PLC N-terminal propeptide. Mpl maturation also leads to the secretion of both Mpl and PC-PLC across the bacterial cell wall. Previously, we identified negatively charged and uncharged amino acid residues within the N terminus of the PC-PLC propeptide that influence the ability of Mpl to mediate the maturation of PC-PLC, suggesting that these residues promote the interaction of the PC-PLC propeptide with Mpl. In the present study, we identified a non-catalytic histidine residue (H226) that influences Mpl secretion across the cell wall and its ability to process PC-PLC. Our results suggest that a positive charge at position 226 is required for Mpl functions other than autolysis. Based on the charge requirement at this position, we hypothesize that this residue contributes to the interaction of Mpl with the PC-PLC propeptide.

Alsophila weidenbrueckii (Cyatheaceae), a new scaly tree fern from Papua New Guinea

NARCIS (Netherlands)

Lehnert, M.

2016-01-01

The scaly tree fern Alsophila weidenbrueckii is described and illustrated as new to science. It occurs in the Bismarck range in north-eastern New Guinea at 1200–2100 m in evergreen wet mountain forest. The species reaches maturity at a comparatively old age and large size and regenerates only in

Influence of Inter stock Grafting as a Dwarfing Component on Peach Trees Development and Fruit Quality

International Nuclear Information System (INIS)

Hossain, S.; Nasrulhaq, A.; Mizutani, F.

2006-01-01

A field experiment was conducted to investigate the interstock grafting effect as a dwarfing component on Peach tree development and fruit quality. The study was made at the Ehime University Experimental farm located in south-eastern Japan during the period 2001-2005. The results of the field experiment indicated that pruned branches weight and flowers number were lower in interstock than in control trees. However, percent fruit set was a little higher in intersrock treated than in control trees. Fruit yield and fruit weight were lower in interstock treated than control trees. Soluble solids content and maturity index were higher in interstock treated trees than control, with an increasing trend in the period from 2001 to 2005, while titratable acidity showed that the livestock grafting is a useful dwarfing component for controlling the size of peach trees and improvement of fruit quality. (author)

Assessment of pesticide residues on selected vegetables of Pakistan

International Nuclear Information System (INIS)

Khan, M.S.; Shah, M.M.

2011-01-01

The present study was conducted to determine the pesticide residues on selected summer vegetables. Five vegetables were grown with three replicates in a split plot randomized complete block design. Pesticides were sprayed on vegetables thrice at regular intervals each after 15 days. At maturity the pesticides residues were extracted from edible and leaf portions using anhydrous sodium sulfate and ethyl acetate while adsorption chromatography technique was used for cleanup. The extracts were subjected to high performance liquid chromatography (HPLC) for separation and analysis of the compounds. Significant differences (p<0.05) were found in the pesticides residues on edible portions whereas highly significant differences (p<0.001) were observed for the leafy portions. The residual level of cypermethrin was highest (16.2 mg kg/sup -1/) in edible portion of bitter gourd, while Lambdacyhalothrin and Mancozeb residues were detected high (4.50 mg kg/sup -1/, 6.26 mg kg/sup -1/) in edible portion of bitter gourd and Cucumber respectively. Cypermethrin residues were high (1.86 mg kg/sup -1/) in Okra leaves. Mancozeb and Lambdacyhalothrin residual level was high (1.23 mg kg/sup -1/, and 0.0002 mg kg/sup -1/) in chili and tomato leaves. Cypermethrin residues were readily detected in edible and leaf portion of the selected vegetables. (author)

Role of Helicobacter pylori methionine sulfoxide reductase in urease maturation

Science.gov (United States)

Kuhns, Lisa G.; Mahawar, Manish; Sharp, Joshua S.; Benoit, Stéphane; Maier, Robert J.

2014-01-01

The persistence of the gastric pathogen Helicobacter pylori is due in part to urease and Msr (methionine sulfoxide reductase). Upon exposure to relatively mild (21% partial pressure of O2) oxidative stress, a Δmsr mutant showed both decreased urease specific activity in cell-free extracts and decreased nickel associated with the partially purified urease fraction as compared with the parent strain, yet urease apoprotein levels were the same for the Δmsr and wild-type extracts. Urease activity of the Δmsr mutant was not significantly different from the wild-type upon non-stress microaerobic incubation of strains. Urease maturation occurs through nickel mobilization via a suite of known accessory proteins, one being the GTPase UreG. Treatment of UreG with H2O2 resulted in oxidation of MS-identified methionine residues and loss of up to 70% of its GTPase activity. Incubation of pure H2O2-treated UreG with Msr led to reductive repair of nine methionine residues and recovery of up to full enzyme activity. Binding of Msr to both oxidized and non-oxidized UreG was observed by cross-linking. Therefore we conclude Msr aids the survival of H. pylori in part by ensuring continual UreG-mediated urease maturation under stress conditions. PMID:23181726

Testicular maturation of Oligosarcus hepsetus (Cuvier (Actinopterygii, Characidae in a brazilian tropical reservoir

Directory of Open Access Journals (Sweden)

R. N. Santos

Full Text Available Six reproductive classes of male Oligosarcus hepsetus (Cuvier, 1829, a medium-sized carnivorous Characiform species, are described based on macroscopic and histological techniques. A total of 175 individuals were caught monthly between April 2001 and June 2002 in the Lajes Reservoir, Brazil, one of the largest impoundment areas in the state of Rio de Janeiro. The reproductive classes were based upon changes in the testicular morphology and stages of germinative cells, i.e., resting, early maturing, late maturing, mature, partially spent and totally spent. Fish in the resting class showed testes with spermatogonia and spermatocytes along the wall of seminal lobules, while spermatids were present in the lumina of the lobules. During early maturing, active spermatogenesis occurs throughout the testis; in the late maturing and mature classes, the lobules are swollen with sperm that are typical of fish in breeding condition. Spent testes presented seminal lobules with residual spermatozoa, coinciding with decreasing GSI and greatly reduced sperm production. Overall, the testicular morphology and class of maturity development of O. hepsetus in the Lajes reservoir did not differ significantly from those of closely related species in other lentic environments. Lower GSI values in the oligotrophic Lajes reservoir than in other eutrophic natural lakes suggest that this species may be modifying this aspect of its reproductive strategy in response to the artificial environment.

A 6-year-long manipulation with soil warming and canopy nitrogen additions does not affect xylem phenology and cell production of mature black spruce

Directory of Open Access Journals (Sweden)

Madjelia Cangre Ebou eDAO

2015-11-01

Full Text Available The predicted climate warming and increased atmospheric inorganic nitrogen deposition are expected to have dramatic impacts on plant growth. However, the extent of these effects and their interactions remains unclear for boreal forest trees. The aim of this experiment was to investigate the effects of increased soil temperature and nitrogen (N depositions on stem intra-annual growth of two mature stands of black spruce [Picea mariana (Mill. BSP] in Quebec, Canada. During 2008-2013, the soil around mature trees was warmed up by 4 °C with heating cables during the growing season and precipitations containing three times the current inorganic N concentration were added by frequent canopy applications. Xylem phenology and cell production were monitored weekly from April to October. The 6-year-long experiment performed in two sites at different altitude showed no substantial effect of warming and N-depositions on xylem phenological phases of cell enlargement, wall thickening and lignification. Cell production, in terms of number of tracheids along the radius, also did not differ significantly and followed the same patterns in control and treated trees. These findings allowed the hypothesis of a medium-term effect of soil warming and N depositions on the growth of mature black spruce to be rejected.

Can we set a global threshold age to define mature forests?

Directory of Open Access Journals (Sweden)

Philip Martin

2016-02-01

Full Text Available Globally, mature forests appear to be increasing in biomass density (BD. There is disagreement whether these increases are the result of increases in atmospheric CO2 concentrations or a legacy effect of previous land-use. Recently, it was suggested that a threshold of 450 years should be used to define mature forests and that many forests increasing in BD may be younger than this. However, the study making these suggestions failed to account for the interactions between forest age and climate. Here we revisit the issue to identify: (1 how climate and forest age control global forest BD and (2 whether we can set a threshold age for mature forests. Using data from previously published studies we modelled the impacts of forest age and climate on BD using linear mixed effects models. We examined the potential biases in the dataset by comparing how representative it was of global mature forests in terms of its distribution, the climate space it occupied, and the ages of the forests used. BD increased with forest age, mean annual temperature and annual precipitation. Importantly, the effect of forest age increased with increasing temperature, but the effect of precipitation decreased with increasing temperatures. The dataset was biased towards northern hemisphere forests in relatively dry, cold climates. The dataset was also clearly biased towards forests <250 years of age. Our analysis suggests that there is not a single threshold age for forest maturity. Since climate interacts with forest age to determine BD, a threshold age at which they reach equilibrium can only be determined locally. We caution against using BD as the only determinant of forest maturity since this ignores forest biodiversity and tree size structure which may take longer to recover. Future research should address the utility and cost-effectiveness of different methods for determining whether forests should be classified as mature.

Biomass yield and modeling of logging residues of Terminalia ...

African Journals Online (AJOL)

The use of Dbh as an independent variable in the prediction of models for estimating the biomass residues of the tree species was adjudged best because it performed well. The validation results showed that the selected models satisfied the assumptions of regression analysis. The practical implication of the models is that ...

Tracking ENSO with tropical trees: Progress in stable isotope dendroclimatology

Science.gov (United States)

Evans, M. N.; Poussart, P. F.; Saleska, S. R.; Schrag, D. P.

2002-12-01

The terrestrial tropics remain an important gap in the growing proxy network used to characterize past ENSO behavior. Here we describe a strategy for development of proxy estimates of paleo-ENSO, via proxy rainfall estimates derived from stable isotope (δ18O) measurements made on tropical trees. The approach applies a new model of oxygen isotopic composition of alpha-cellulose (Roden et al., 2000), a rapid method for cellulose extraction from raw wood (Brendel et al., 2000), and continuous flow isotope ratio mass spectrometry (Brand, 1996) to develop proxy chronological, rainfall and growth rate estimates from tropical trees, even those lacking annual rings. The promise and pitfalls of the approach are illustrated in pilot datasets from the US, Costa Rica, Brazil, and Peru, which show isotopic cycles of 4-6 per mil, and interannual anomalies of up to 8 per mil. Together with the mature ENSO proxies (corals, extratropical tree-rings, varved sediments, and ice cores), replicated and well-dated stable isotope chronologies from tropical trees may eventually improve our understanding of ENSO history over the past several hundred years.

A fragment of alpha-actinin promotes monocyte/macrophage maturation in vitro.

Science.gov (United States)

Luikart, S; Wahl, D; Hinkel, T; Masri, M; Oegema, T

1999-02-01

Conditioned media (CM) from cultures of HL-60 myeloid leukemia cells grown on extracellular bone marrow matrix contains a factor that induces macrophage-like maturation of HL-60 cells. This factor was purified from the CM of HL-60 cells grown on bone marrow stroma by ammonium sulfate precipitation, then sequential chromatography on DEAE, affi-gel blue affinity, gel exclusion, and wheat germ affinity columns, followed by C-4 reverse phase HPLC, and SDS-PAGE. The maturation promoting activity of the CM was identified in a single 31 kD protein. Amino acid sequence analysis of four internal tryptic peptides of this protein confirmed significant homology with amino acid residues 48-60, 138-147, 215-220, and 221-236 of human cytoskeletal alpha-actinin. An immunoaffinity purified rabbit polyclonal anti-chicken alpha-actinin inhibited the activity of HL-60 conditioned media. A 27 kD amino-terminal fragment of alpha-actinin produced by thermolysin digestion of chicken gizzard alpha-actinin, but not intact alpha-actinin, had maturation promoting activity on several cell types, including blood monocytes, as measured by lysozyme secretion and tartrate-resistant acid phosphatase staining. We conclude that an extracellular alpha-actinin fragment can promote monocyte/macrophage maturation. This represents the first example of a fragment of a cytoskeletal component, which may be released during tissue remodeling and repair, playing a role in phagocyte maturation.

Preparation of activated carbons from olive-tree wood revisited. II. Physical activation with air

Energy Technology Data Exchange (ETDEWEB)

Ould-Idriss, A.; Cuerda-Correa, E.M.; Fernandez-Gonzalez, C.; Alexandre-Franco, M.F.; Gomez-Serrano, V. [Extremadura Univ., Badajoz (Spain). Dept. of Organic and Inorganic Chemistry; Stitou, M. [Univ. Abdelmalek Esaadi, Tetouan (Morocco). Dept. de Chimie; Macias-Garcia, A. [Extremadura Univ., Badajoz (Spain). Dept. of Mechanical, Energetic and Materials Engineering

2011-02-15

Olive-tree has been grown in the Mediterranean countries for centuries. For an adequate development of the tree it must be subjected to different treatments such as trimming, large amounts of a woody residue being produced. Such a residue has been traditionally used as a domestic fuel or simply burnt in the landfield. In both cases greenhouse gases are generated to a large extent. Thus, the preparation of activated carbons from olive-tree wood appears as an attractive alternative to valorize this by-product. Commonly, two activation strategies are used with such an aim, namely chemical and physical activation. In this study, the optimization of the physical activation method with air for the production of activated carbon has been analyzed. The results obtained clearly show that if the preparation conditions are adequately controlled, it is possible to prepare activated carbons showing tailored properties in terms of micro- or mesoporous texture and surface area. (author)

Soil Temperature Moderation by Crop Residue Mulch, Grevilla Robusta Tillage Mode

International Nuclear Information System (INIS)

Oteng'i, S.B.B.

2006-01-01

The effects of mulching with crop residues and shading by Grevillea robust trees on the soil temperatures of Mt. Kenya Volcanic soils at Matanya area, Laikipia district, were studied. Soil thermistors connected to data-loggers(type Grant squirrel)were used to record soil temperaturs. The soils were mulched and minimum tilled (depths of 0.04 till 0.05m), and unmulched and deep tilled (depths 0.20till 0.25m) in plots of pruned and unpruned trees and also to cotrol (non-agroforestry) plots. The results showed that closer tp the trees, canopy differences ionfluenced changes in soil temperatures of about ≠2.0 degrees centrigrade. The dumping depth and Stigters ratio values showed soil temperatures were modified by treatment and tree canopy differences. The modified soil temperatures resulted in better crop performance when the soil water was adequate.(author)

Wood residue production and utilization research at Virgina Tech

Energy Technology Data Exchange (ETDEWEB)

Grace, L.A.; Stuart, W.B.; Sharp, J.C. (Virginia Polytechnic Inst. and State Univ., Blacksburg, VA (US)); Yu Jian-guo (Northeastern Forestry Univ., Harbin (CN))

1988-01-01

This paper describes the activities in crushing, drying and segregating wood residues currently underway at Virginia Tech. Experiments with high speed roll crushing as a means of reducing logging residues and small diameter stems to a form suitable for transportation and further processing appear promising. Deflecting whole tree chip streams across a double set of screens coupled with stripping transport air has been shown to reduce bark content and remove fines, bark and grit. Testing and refinement of two prototype sawdust driers is currently under way. Both driers offer increased opportunity for suspension burning and transport. (4 refs., 3 tabs., 3 figs.) (au).

Field note: irrigation of tree stands with groundwater containing 1,4-dioxane.

Science.gov (United States)

Ferro, Ari M; Tammi, Carl E

2009-07-01

Coniferous and deciduous tree stands totaling 14 ha were recently planted on a closed landfill, and when mature, the stands are expected to be part of a natural treatment system for recovered groundwater. The trees would be irrigated at the rate of 189 L/min year-round with water containing 1,4-dioxane (trees. The water is moderately saline and contains elevated levels of manganese. This paper describes a concurrent series of preliminary studies, performed prior to the full-scale planting, to assess the feasibility of the phytoremediation system. Greenhouse experiments were carried out to identify tree species that can take up 1,4-dioxane and are tolerant of the water. Estimates were made of the area of the tree stand necessary to transpire the irrigation water plus precipitation. The landfill matrix was characterized in terms of its percolation rate and water holding capacity and based on those results salinity-modeling studies were carried out to estimate the fate and leaching potential of the various inorganic species that would accumulate in the root-zone of the trees. A pilot study, currently in progress on the landfill, suggested that the landfill cap is a suitable matrix for the establishment of large trees, and that the stands could be irrigated without the production of excess drainage.

Tree-rings mirror management legacy: dramatic response of standard oaks to past coppicing in Central Europe.

Directory of Open Access Journals (Sweden)

Jan Altman

Full Text Available BACKGROUND: Coppicing was one of the most important forest management systems in Europe documented in prehistory as well as in the Middle Ages. However, coppicing was gradually abandoned by the mid-20(th century, which has altered the ecosystem structure, diversity and function of coppice woods. METHODOLOGY/PRINCIPAL FINDINGS: Our aim was to disentangle factors shaping the historical growth dynamics of oak standards (i.e. mature trees growing through several coppice cycles in a former coppice-with-standards in Central Europe. Specifically, we tried to detect historical coppicing events from tree-rings of oak standards, to link coppicing events with the recruitment of mature oaks, and to determine the effects of neighbouring trees on the stem increment of oak standards. Large peaks in radial growth found for the periods 1895-1899 and 1935-1939 matched with historical records of coppice harvests. After coppicing, the number of newly recruited oak standards markedly grew in comparison with the preceding or following periods. The last significant recruitment of oak standards was after the 1930s following the last regular coppicing event. The diameter increment of oak standards from 1953 to 2003 was negatively correlated with competition indices, suggesting that neighbouring trees (mainly resprouting coppiced Tilia platyphyllos partly suppressed the growth of oak standards. Our results showed that improved light conditions following historical coppicing events caused significant increase in pulses of radial growth and most probably maintained oak recruitment. CONCLUSIONS/SIGNIFICANCE: Our historical perspective carries important implications for oak management in Central Europe and elsewhere. Relatively intense cutting creating open canopy woodlands, either as in the coppicing system or in the form of selective cutting, is needed to achieve significant radial growth in mature oaks. It is also critical for the successful regeneration and long

The Effect of Water Limitation on Volatile Emission, Tree Defense Response, and Brood Success of Dendroctonus ponderosae in Two Pine Hosts, Lodgepole, and Jack Pine

OpenAIRE

Lusebrink, Inka; Erbilgin, Nadir; Evenden, Maya L.

2016-01-01

The mountain pine beetle (MPB; Dendroctonus ponderosae) has recently expanded its range from lodgepole pine forest into the lodgepole × jack pine hybrid zone in central Alberta, within which it has attacked pure jack pine. This study tested the effects of water limitation on tree defense response of mature lodgepole and jack pine (Pinus contorta and Pinus banksiana) trees in the field. Tree defense response was initiated by inoculation of trees with the MPB-associated fungus Grosmannia clavig...

Problems with Excessive Residual Lower Leg Length in Pediatric Amputees

Science.gov (United States)

Osebold, William R; Lester, Edward L; Christenson, Donald M

2001-01-01

We studied six pediatric amputees with long below-knee residual limbs, in order to delineate their functional and prosthetic situations, specifically in relation to problems with fitting for dynamic-response prosthetic feet. Three patients had congenital pseudoarthrosis of the tibia secondary to neurofibromatosis, one had fibular hemimelia, one had a traumatic amputation, and one had amputation secondary to burns. Five patients had Syme's amputations, one had a Boyd amputation. Ages at amputation ranged from nine months to five years (average age 3 years 1 month). After amputation, the long residual below-knee limbs allowed fitting with only the lowest-profile prostheses, such as deflection plates. In three patients, the femoral dome to tibial plafond length was greater on the amputated side than on the normal side. To allow room for more dynamic-response (and larger) foot prostheses, two patients have undergone proximal and distal tibial-fibular epiphyseodeses (one at age 5 years 10 months, the other at 3 years 7 months) and one had a proximal tibial-fibular epiphyseodesis at age 7 years 10 months. (All three patients are still skeletally immature.) The families of two other patients are considering epiphyseodeses, and one patient is not a candidate (skeletally mature). Scanogram data indicate that at skeletal maturity the epiphyseodesed patients will have adequate length distal to their residual limbs to fit larger and more dynamic-response prosthetic feet. PMID:11813953

Maize yield response to residual soil moisture In inland valley of ...

African Journals Online (AJOL)

Two sets of experiments were conducted in three replicates each on both upper and lower fringes of Minna inland valley, Niger State, Nigeria. While the upper fringe was subjected to surface irrigation the residual moisture in the lower fringe provided the maize crop with all water requirements from planting to maturity.

Carbaryl and monocrotophos residues in cottonseed products. Part of a coordinated programme on isotopic tracer-aided studies of chemical residues in cotton seed, feed, oil and related products

International Nuclear Information System (INIS)

Pablo, F.E.

1981-03-01

Cotton plants of Deltapine variety were treated with carbaryl (naphthyl-1- 14 C), (6.7 mg/plant) three times at two week intervals. Seeds were collected at maturity and 14 C-residues were determined in the oil and cake by standard procedures. 14 C-carbaryl and/or metabolite residues were 0.42 and 0.15 mg/kg in the crude oil and cake respectively. Parallel studies were conducted with spectrophotometric techniques using p-nitrobenzene diazonium fluoborate as chromogenic agent. Applications were made three times at a rate of 14 mg/plant. Residues in the crude oil and cake were found to be 0.83 and 0.04 mg/kg respectively. The higher residue level in the oil - compared to the radiometric technique - probably relates to higher application rates. Cotton plants of Deltapine variety were treated with (N-methyl- 14 C) monocrotophos (0.09 mg/plant) three times at two week intervals, as recommended for agricultural practice. Seeds were collected at maturity and standard procedures for extraction, clean-up and paper and thin-layer chromatography were adopted for the ultimate determination of residues in seed, oil and cake. Parallel experiments, using spectrophotometric techniques, were made for comparison. 14 C-residues of monocrotophos and/or metabolites in cottonseed, crude oil and cake were found to be 0.06, 0.12 and 0.05 mg/kg respectively. Corresponding data obtained by non-nuclear techniques were 0.18, 0.42 and 0.15 mg/kg respectively. The discrepancy between the two sets of results may be related to different rates of application: 0.3 mg and 0.09 mg/plant for non-nuclear and radiometric techniques respectively. Among the major metabolites identified in the cottonseed were dimethyl phosphate and O-desmethyl monocrotophos. N-demethylated monocrotophos and sugar conjugates were also identified

Compared cycling in a soil-plant system of pea and barley residue nitrogen

DEFF Research Database (Denmark)

Jensen, E.S.

1996-01-01

Field experiments were carried out on a temperate soil to determine the decline rate, the stabilization in soil organic matter and the plant uptake of N from N-15-labelled crop residues. The fate of N from field pea (Pisum sativum L.) and spring barley (Hordeum vulgare L.) residues was followed...... mineralization of N was highly correlated to the concentrations of soluble C and N and the lignin:N ratio of residues. The contribution of residue-derived N to the inorganic N pool was at its maximum 30 DAI (10-55%) and declined to on average 5% after 3 years of decomposition. Residual organic labelled N...... in the top 10 cm soil declined rapidly during the initial 86 DAI for all residue types. Leaching of soluble organic materials may have contributed to this decline. At 216 DAI 72, 59 and 45% of the barley, mature pea and green pea residue N, respectively, were present in organic N-forms in the topsoil. During...

Effects of species biological traits and environmental heterogeneity on simulated tree species distribution shifts under climate change.

Science.gov (United States)

Wang, Wen J; He, Hong S; Thompson, Frank R; Spetich, Martin A; Fraser, Jacob S

2018-09-01

Demographic processes (fecundity, dispersal, colonization, growth, and mortality) and their interactions with environmental changes are not well represented in current climate-distribution models (e.g., niche and biophysical process models) and constitute a large uncertainty in projections of future tree species distribution shifts. We investigate how species biological traits and environmental heterogeneity affect species distribution shifts. We used a species-specific, spatially explicit forest dynamic model LANDIS PRO, which incorporates site-scale tree species demography and competition, landscape-scale dispersal and disturbances, and regional-scale abiotic controls, to simulate the distribution shifts of four representative tree species with distinct biological traits in the central hardwood forest region of United States. Our results suggested that biological traits (e.g., dispersal capacity, maturation age) were important for determining tree species distribution shifts. Environmental heterogeneity, on average, reduced shift rates by 8% compared to perfect environmental conditions. The average distribution shift rates ranged from 24 to 200myear -1 under climate change scenarios, implying that many tree species may not able to keep up with climate change because of limited dispersal capacity, long generation time, and environmental heterogeneity. We suggest that climate-distribution models should include species demographic processes (e.g., fecundity, dispersal, colonization), biological traits (e.g., dispersal capacity, maturation age), and environmental heterogeneity (e.g., habitat fragmentation) to improve future predictions of species distribution shifts in response to changing climates. Copyright © 2018 Elsevier B.V. All rights reserved.

From which soil metal fractions Fe, Mn, Zn and Cu are taken up by olive trees (Olea europaea L., cv. 'Chondrolia Chalkidikis') in organic groves?

Science.gov (United States)

Chatzistathis, T; Papaioannou, A; Gasparatos, D; Molassiotis, A

2017-12-01

Organic farming has been proposed as an alternative agricultural system to help solve environmental problems, like the sustainable management of soil micronutrients, without inputs of chemical fertilizers. The purposes of this study were: i) to assess Fe, Mn, Zn and Cu bioavailability through the determination of sequentially extracted chemical forms (fractions) and their correlation with foliar micronutrient concentrations in mature organic olive (cv. 'Chondrolia Chalkidikis') groves; ii) to determine the soil depth and the available forms (fractions) by which the 4 metals are taken up by olive trees. DTPA extractable (from the soil layers 0-20, 20-40 and 40-60 cm) and foliar micronutrient concentrations were determined in two organic olive groves. Using the Tessier fractionation, five fractions, for all the metals, were found: exchangeable, bound to carbonates (acid-soluble), bound to Fe-Mn oxides (reducible), organic (oxidizable), as well as residual form. Our results indicated that Fe was taken up by the olive trees as organic complex, mainly from the soil layer 40-60 cm. Manganese was taken up from the exchangeable fraction (0-20 cm); Zinc was taken up as organic complex from the layers 0-20 and 40-60 cm, as well as in the exchangeable form from the upper 20 cm. Copper was taken up from the soil layers 0-20 and 40-60 cm as soluble organic complex, and as exchangeable ion from the upper 20 cm. Our data reveal the crucial role of organic matter to sustain metal (Fe, Zn and Cu) uptake -as soluble complexes-by olive trees, in mature organic groves grown on calcareous soils; it is also expected that these data will constitute a thorough insight and useful tool towards a successful nutrient and organic C management for organic olive groves, since no serious nutritional deficiencies were found. Copyright © 2017 Elsevier Ltd. All rights reserved.

Forest treatment residues for thermal energy compared with disposal by onsite burning: Emissions and energy return

Science.gov (United States)

Greg Jones; Dan Loeffler; David Calkin; Woodam Chung

2010-01-01

Mill residues from forest industries are the source for most of the current wood-based energy in the US, approximately 2.1% of the nation's energy use in 2007. Forest residues from silvicultural treatments, which include limbs, tops, and small non-commercial trees removed for various forest management objectives, represent an additional source of woody biomass for...

Relationship of Climatic and Forest Factors to Drought- and Heat-Induced Tree Mortality.

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Qingyin Zhang

Full Text Available Tree mortality due to warming and drought is a critical aspect of forest ecosystem in responding to climate change. Spatial patterns of tree mortality induced by drought and its influencing factors, however, have yet to be documented at the global scale. We collected observations from 248 sites globally where trees have died due to drought and then assessed the effects of climatic and forest factors on the rate of tree mortality. The global mean annual mortality rate was 5.5%. The rate of tree mortality was significantly and negatively correlated with mean annual precipitation (P 2000 mm and was severe in regions with mean annual precipitation <1000 mm. Mortality rates varied amongst species. The global annual rate of mortality was much higher for gymnosperms (7.1% than angiosperms (4.8% but did not differ significantly between evergreen (6.2% and deciduous (6.1% species. Stand age and wood density affected the mortality rate. Saplings (4.6% had a higher mortality rate than mature trees (3.2%, and mortality rates significantly decreased with increasing wood density for all species (P < 0.01. We therefore concluded that the tree mortality around the globe varied with climatic and forest factors. The differences between tree species, wood density, stand density, and stand age should be considered when evaluating tree mortality at a large spatial scale during future climatic extremes.

Genome-Wide Analysis of Oleosin Gene Family in 22 Tree Species: An Accelerator for Metabolic Engineering of BioFuel Crops and Agrigenomics Industrial Applications?

Science.gov (United States)

Cao, Heping

2015-09-01

Trees contribute to enormous plant oil reserves because many trees contain 50%-80% of oil (triacylglycerols, TAGs) in the fruits and kernels. TAGs accumulate in subcellular structures called oil bodies/droplets, in which TAGs are covered by low-molecular-mass hydrophobic proteins called oleosins (OLEs). The OLEs/TAGs ratio determines the size and shape of intracellular oil bodies. There is a lack of comprehensive sequence analysis and structural information of OLEs among diverse trees. The objectives of this study were to identify OLEs from 22 tree species (e.g., tung tree, tea-oil tree, castor bean), perform genome-wide analysis of OLEs, classify OLEs, identify conserved sequence motifs and amino acid residues, and predict secondary and three-dimensional structures in tree OLEs and OLE subfamilies. Data mining identified 65 OLEs with perfect conservation of the "proline knot" motif (PX5SPX3P) from 19 trees. These OLEs contained >40% hydrophobic amino acid residues. They displayed similar properties and amino acid composition. Genome-wide phylogenetic analysis and multiple sequence alignment demonstrated that these proteins could be classified into five OLE subfamilies. There were distinct patterns of sequence conservation among the OLE subfamilies and within individual tree species. Computational modeling indicated that OLEs were composed of at least three α-helixes connected with short coils without any β-strand and that they exhibited distinct 3D structures and ligand binding sites. These analyses provide fundamental information in the similarity and specificity of diverse OLE isoforms within the same subfamily and among the different species, which should facilitate studying the structure-function relationship and identify critical amino acid residues in OLEs for metabolic engineering of tree TAGs.

Estimation the Amount of Oil Palm Trees Production Using Remote Sensing Technique

Science.gov (United States)

Fitrianto, A. C.; Tokimatsu, K.; Sufwandika, M.

2017-12-01

Currently, fossil fuels were used as the main source of power supply to generate energy including electricity. Depletion in the amount of fossil fuels has been causing the increasing price of crude petroleum and the demand for alternative energy which is renewable and environment-friendly and it is defined from vegetable oils such palm oil, rapeseed and soybean. Indonesia known as the big palm oil producer which is the largest agricultural industry with total harvested oil palm area which is estimated grew until 8.9 million ha in 2015. On the other hand, lack of information about the age of oil palm trees and changes also their spatial distribution is mainly problem for energy planning. This research conducted to estimate fresh fruit bunch (FFB) of oil palm and their distribution using remote sensing technique. Cimulang oil palm plantation was choose as study area. First step, estimated the age of oil palm trees based on their canopy density as the result from Landsat 8 OLI analysis and classified into five class. From this result, we correlated oil palm age with their average FFB production per six months and classified into seed (0-3 years, 0kg), young (4-8 years, 68.77kg), teen (9-14 years, 109.08kg), and mature (14-25 years, 73.91kg). The result from satellite image analysis shows if Cimulang plantation area consist of teen old oil palm trees that it is covers around 81.5% of that area, followed by mature oil palm trees with 18.5% or corresponding to 100 hectares and have total production of FFB every six months around 7,974,787.24 kg.

Biometric-based estimation of net ecosystem production in a mature Japanese cedar (Cryptomeria japonica) plantation beneath a flux tower.

Science.gov (United States)

Yashiro, Yuichiro; Lee, Na-Yeon M; Ohtsuka, Toshiyuki; Shizu, Yoko; Saitoh, Taku M; Koizumi, Hiroshi

2010-07-01

Quantification of carbon budgets and cycling in Japanese cedar (Cryptomeria japonica D. Don) plantations is essential for understanding forest functions in Japan because these plantations occupy about 20% of the total forested area. We conducted a biometric estimate of net ecosystem production (NEP) in a mature Japanese cedar plantation beneath a flux tower over a 4-year period. Net primary production (NPP) was 7.9 Mg C ha(-1) year(-1) and consisted mainly of tree biomass increment and aboveground litter production. Respiration was calculated as 6.8 (soil) and 3.3 (root) Mg C ha(-1) year(-1). Thus, NEP in the plantation was 4.3 Mg C ha(-1) year(-1). In agreement with the tower-based flux findings, this result suggests that the Japanese cedar plantation was a strong carbon sink. The biometric-based NEP was higher among most other types of Japanese forests studied. Carbon sequestration in the mature plantation was characterized by a larger increment in tree biomass and lower mortality than in natural forests. Land-use change from natural forest to Japanese cedar plantation might, therefore, stimulate carbon sequestration and change the carbon allocation of NPP from an increment in coarse woody debris to an increase in tree biomass.

Cervical mature teratoma 17 years after initial treatment of testicular teratocarcinoma: report of a late relapse

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Alavion Mina

2007-01-01

Full Text Available Abstract Background Late relapses of testicular germ cell tumor are uncommon. We report a case of cervical mature teratoma appeared 17 years after treatment of testicular teratocarcinoma. Case presentation A 20- year- old patient underwent left sided orchiectomy followed by systemic therapy and retroperitoneal residual mass resection in 1989. He remained in complete remission for 200 months. In 2005 a huge left supraclavicular neck mass with extension to anterior mediastinum appeared. Radical surgical resection of the mass was performed and pathologic examination revealed mature teratoma. Conclusion This is one of the longest long-term reported intervals of a mature teratoma after treatment of a testicular nonseminoma germ cell tumor. This case emphasizes the necessity for follow up of testicular cancer throughout the patient's life.

Water Tree Influence on Space Charge Distribution and on the Residual Electric Field in Polyethylene Insulation

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Cristina Stancu

2009-10-01

Full Text Available A computation method of the electricfield and ionic space charge density in planeinsulations with water trees (using a ComsolMultiphysics software and the thermal step currents(Im(t measured with Thermal Step Method ispresented. A parabolic spatial variation of volumecharge density, an exponential spatial variation ofthe electric permittivity ε and a linear dependency ofε and the temperature coefficient of permittivity αεwith the average water concentration in trees, areconsidered. For a water tree with a known length,different values of charge density are consideredand the electric field and the thermal step currentsIc(t are calculated. The currents Ic(t and Im(t arecompared and the volume of charge density andelectric field for which Ic(t is identical with Im(t arekept.

Herbivory of tropical rain forest tree seedlings correlates with future mortality.

Science.gov (United States)

Eichhorn, Markus P; Nilus, Reuben; Compton, Stephen G; Hartley, Sue E; Burslem, David F R P

2010-04-01

Tree seedlings in tropical rain forests are subject to both damage from natural enemies and intense interspecific competition. This leads to a trade-off in investment between defense and growth, and it is likely that tree species specialized to particular habitats tailor this balance to correspond with local resource availability. It has also been suggested that differential herbivore impacts among tree species may drive habitat segregation, favoring species adapted to particular resource conditions. In order to test these predictions, a reciprocal transplant experiment in Sabah, Malaysia, was established with seedlings of five species of Dipterocarpaceae. These were specialized to either alluvial (Hopea nervosa, Parashorea tomentella) or sandstone soils (Shorea multiflora, H. beccariana), or were locally absent (S. fallax). A total of 3000 seedlings were planted in paired gap and understory plots in five sites on alluvial and sandstone soils. Half of all seedlings were fertilized. Seedling growth and mortality were recorded in regular samples over 3.5 years, and rates of insect herbivore damage were estimated from censuses of foliar tissue loss on marked mature leaves and available young leaves. Greater herbivory rates on mature leaves had no measurable effects on seedling growth but were associated with a significantly increased likelihood of mortality during the following year. In contrast, new-leaf herbivory rates correlated with neither growth nor mortality. There were no indications of differential impacts of herbivory among the five species, nor between experimental treatments. Herbivory was not shown to influence segregation of species between soil types, although it may contribute toward differential survival among light habitats. Natural rates of damage were substantially lower than have been shown to influence tree seedling growth and mortality in previous manipulative studies.

Dental maturation, eruption, and gingival emergence in the upper jaw of newborn primates.

Science.gov (United States)

Smith, Timothy D; Muchlinski, Magdalena N; Jankord, Kathryn D; Progar, Abbigal J; Bonar, Christopher J; Evans, Sian; Williams, Lawrence; Vinyard, Christopher J; Deleon, Valerie B

2015-12-01

In this report we provide data on dental eruption and tooth germ maturation at birth in a large sample constituting the broadest array of non-human primates studied to date. Over 100 perinatal primates, obtained from natural captive deaths, were screened for characteristics indicating premature birth, and were subsequently studied using a combination of histology and micro-CT. Results reveal one probable unifying characteristic of living primates: relatively advanced maturation of deciduous teeth and M1 at birth. Beyond this, there is great diversity in the status of tooth eruption and maturation (dental stage) in the newborn primate. Contrasting strategies in producing a masticatory battery are already apparent at birth in strepsirrhines and anthropoids. Results show that dental maturation and eruption schedules are potentially independently co-opted as different strategies for attaining feeding independence. The most common strategy in strepsirrhines is accelerating eruption and the maturation of the permanent dentition, including replacement teeth. Anthropoids, with only few exceptions, accelerate mineralization of the deciduous teeth, while delaying development of all permanent teeth except M1. These results also show that no living primate resembles the altricial tree shrew (Tupaia) in dental development. Our preliminary observations suggest that ecological explanations, such as diet, provide an explanation for certain morphological variations at birth. These results confirm previous work on perinatal indriids indicating that these and other primates telegraph their feeding adaptations well before masticatory anatomy is functional. Quantitative analyses are required to decipher specific dietary and other influences on dental size and maturation in the newborn primate. © 2015 Wiley Periodicals, Inc.

Maturity group classification and maturity locus genotyping of early-maturing soybean varieties from high-latitude cold regions.

Science.gov (United States)

Jia, Hongchang; Jiang, Bingjun; Wu, Cunxiang; Lu, Wencheng; Hou, Wensheng; Sun, Shi; Yan, Hongrui; Han, Tianfu

2014-01-01

With the migration of human beings, advances of agricultural sciences, evolution of planting patterns and global warming, soybeans have expanded to both tropical and high-latitude cold regions (HCRs). Unlike other regions, HCRs have much more significant and diverse photoperiods and temperature conditions over seasons or across latitudes, and HCR soybeans released there show rich diversity in maturity traits. However, HCR soybeans have not been as well classified into maturity groups (MGs) as other places. Therefore, it is necessary to identify MGs in HCRs and to genotype the maturity loci. Local varieties were collected from the northern part of Northeast China and the far-eastern region of Russia. Maturity group reference (MGR) soybeans of MGs MG000, MG00, and MG0 were used as references during field experiments. Both local varieties and MGR soybeans were planted for two years (2010-2011) in Heihe (N 50°15', E 127°27', H 168.5 m), China. The days to VE (emergence), R1 (beginning bloom) and R7 (beginning maturity) were recorded and statistically analyzed. Furthermore, some varieties were further genotyped at four molecularly-identified maturity loci E1, E2, E3 and E4. The HCR varieties were classified into MG0 or even more early-maturing. In Heihe, some varieties matured much earlier than MG000, which is the most early-maturing known MG, and clustered into a separate group. We designated the group as MG0000, following the convention of MGs. HCR soybeans had relatively stable days to beginning bloom from emergence. The HCR varieties diversified into genotypes of E1, E2, E3 and E4. These loci had different effects on maturity. HCRs diversify early-maturing MGs of soybean. MG0000, a new MG that matures much earlier than known MGs, was developed. HCR soybean breeding should focus more on shortening post-flowering reproductive growth. E1, E2, E3, and E4 function differentially.

Expression and characterization of active site mutants of hevamine, a chitinase from the rubber tree Hevea brasiliensis

NARCIS (Netherlands)

Bokma, Evert; Rozeboom, Henriëtte J.; Sibbald, Mark; Dijkstra, Bauke W.; Beintema, Jaap J.

Hevamine is a chitinase from the rubber tree Hevea brasiliensis. Its active site contains Asp125, Glu127, and Tyr183, which interact with the -1 sugar residue of the substrate. To investigate their role in catalysis, we have successfully expressed wild-type enzyme and mutants of these residues as

Spatial Structure Indices of Mature Pedunculate Oak Stands in NW Croatia

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Krunoslav Indir

2013-06-01

Full Text Available Background and Purpose: In order to potentiate a valid comparison of forest stands, numerous indices were developed to express forest structure numerically. Each of those indices described a specific measured or calculated value. In the present study, three of the stand structure indicators, dependent on tree distance, were used: the aggregation index of Clark and Evans, the species mingling index and the diameter differentiation index. The objectives of this study were: to obtain further information about forest structure using the selected indices and to discover any limitations that the implemented indices might display. Materials and Methods: Mature pedunculate oak stands were selected as objects of the study, all located within the “Repaš – Gabajeva Greda” forest management unit, the Forest Administration of Koprivnica. The stands were aged 75 to 132 years. A systematic 500 m grid of 45 circle sample plots was established. The sample plot radius was 15, 25 or 30 meters, depending on the stand’s age. In 2001, the DBH (diameter at breast height and tree positions in regard to the centre of a plot were measured on each sample plot. The mutual distances between trees were calculated, as well as the values of the three selected stand structure indices. The two procedures of the aggregation index of Clark and Evans were calculated for all 45 sample plots. In the first case only the pedunculate oak trees were observed, and in the other all trees on the plot. The species mingling index and the diameter differentiation index were calculated for each tree in two procedures: in relatio to three and four nearest neighbouring trees. The plot/stand totals were managed as the average index of individual trees. Results: Values of the aggregation index of Clark and Evans after all trees have been observed were from 0.89 to 1.28, which indicated a random distribution of trees. In case of considering only pedunculate oak trees, the index of the plots

Embryonal rhabdomyosarcoma of the biliary tree: a case report

International Nuclear Information System (INIS)

Oh, Jong Young; Nam, Kyung Jin; Choi, Jong Chul; Park, Byung Ho; Lee, Ki Nam; Chung, Duck Hwan

1995-01-01

Rhabdomyosarcoma are reportedly the most common soft tissue sarcoma occurring in childhood, but the biliary tree is a rare site of origin for this tumor. Recently we experienced a case of embryonal rhabdomyosarcoma of the biliary tree in a 30-month-old child. Ultrasonography showed hypoechoic mass filling the dilated left intrahepatic and extrahepatic bile ducts, and CT showed hypodense mass with heterogeneous enhancement after contrast infusion. Intraoperative cholangiography showed filling defects within the dilated left intrahepatic and extrahepatic bile ducts. Postoperative MRI showed residual mass within the left intrahepatic duct which was hypointense on T1WI and hyperintense on T2WI

Component tree analysis of cystovirus φ6 nucleocapsid Cryo-EM single particle reconstructions.

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Lucas M Oliveira

Full Text Available The 3-dimensional structure of the nucleocapsid (NC of bacteriophage φ6 is described utilizing component tree analysis, a topological and geometric image descriptor. The component trees are derived from density maps of cryo-electron microscopy single particle reconstructions. Analysis determines position and occupancy of structure elements responsible for RNA packaging and transcription. Occupancy of the hexameric nucleotide triphosphorylase (P4 and RNA polymerase (P2 are found to be essentially complete in the NC. The P8 protein lattice likely fixes P4 and P2 in place during maturation. We propose that the viral procapsid (PC is a dynamic structural intermediate where the P4 and P2 can attach and detach until held in place in mature NCs. During packaging, the PC expands to accommodate the RNA, and P2 translates from its original site near the inner 3-fold axis (20 sites to the inner 5-fold axis (12 sites with excess P2 positioned inside the central region of the NC.

Effects of drought and irrigation on ecosystem functioning in a mature Scots pine forest

Science.gov (United States)

Dobbertin, Matthias; Brunner, Ivano; Egli, Simon; Eilmann, Britta; Graf Pannatier, Eisabeth; Schleppi, Patrick; Zingg, Andreas; Rigling, Andreas

2010-05-01

Climate change is expected to increase temperature and reduce summer precipitation in Switzerland. To study the expected effects of increased drought in mature forests two different approaches are in general possible: water can be partially or completely removed from the ecosystems via above- or below-canopy roofs or water can be added to already drought-prone ecosystems. Both methods have advantages and disadvantages. In our study water was added to a mature 90-year old Scots pine (Pinus sylvestris L.) forest with a few singe pubescent oaks (Quercus pubescens Willd.), located in the valley bottom of the driest region of Switzerland (Valais). In Valais, Scots pines are declining, usually with increased mortality rates following drought years. It was therefore of special interest to study here how water addition is changing forest ecosystem functioning. The irrigation experiment started in the summer of 2003. Out of eight 0.1 ha experimental plots, four were randomly selected for irrigation, the other four left as a control. Irrigation occurred during rainless nights between April and October, doubling the annual rainfall amount from 650 to 1300 mm. Irrigation water, taken from a near-by irrigation channel, added some nutrients to the plots, but nutrients which were deficient on the site, e.g. nitrogen and phosphorus, were not altered. Tree diameter, tree height and crown width were assessed before the start of the irrigation in winter 2002/2003 and after 7 years of the experiment in 2009/2010. Tree crown transparency (lack of foliage) and leaf area index (LAI) were annually assessed. Additionally, tree mortality was annually evaluated. Mycorrhizal fruit bodies were identified and counted at weekly intervals from 2003 until 2007. Root samples were taken in 2004 and 2005. In 2004 and 2005 wood formation of thirteen trees was analysed in weekly or biweekly intervals using the pinning method. These trees were felled in 2006 for stem, shoot and needle growth analysis

Maturation of Shark Single-Domain (IgNAR) Antibodies: Evidence for Induced-Fit Binding

Energy Technology Data Exchange (ETDEWEB)

Stanfield, R.L.; Dooley, H.; Verdino, P.; Flajnik, M.F.; Wilson, I.A.; /Scripps Res. Inst. /Maryland U.

2007-07-13

Sharks express an unusual heavy-chain isotype called IgNAR, whose variable regions bind antigen as independent soluble domains. To further probe affinity maturation of the IgNAR response, we structurally characterized the germline and somatically matured versions of a type II variable (V) region, both in the presence and absence of its antigen, hen egg-white lysozyme. Despite a disulfide bond linking complementarity determining regions (CDRs) 1 and 3, both germline and somatically matured V regions displayed significant structural changes in these CDRs upon complex formation with antigen. Somatic mutations in the IgNAR V region serve to increase the number of contacts with antigen, as reflected by a tenfold increase in affinity, and one of these mutations appears to stabilize the CDR3 region. In addition, a residue in the HV4 loop plays an important role in antibody-antigen interaction, consistent with the high rate of somatic mutations in this non-CDR loop.

Stabilization and plant uptake of N from 15N-labelled pea residue 16.5 years after incorporation in soil

DEFF Research Database (Denmark)

Laberge, G.; Ambus, P.; Hauggaard-Nielsen, H.

2006-01-01

The decline of N from N-15-labelled mature pea residues was followed in unplanted soil over 16.5 yr. Eight years after residue incorporation, 24% of the residue N-15 input was still present in the soil and, after 16.5 yr, 16% of the residue N-15 input remained. A double exponential model......-amended soils were obtaining 1.7% of their N from residue N. This is, to our knowledge, the longest study on decay of N in soils from N-15-labelled crop residues. The current study thus provides a unique data set for our empirical understanding of N-dynamics in agricultural systems, which is a prerequisite...

From a tree to a stand in Finnish boreal forests: biomass estimation and comparison of methods

OpenAIRE

Liu, Chunjiang

2009-01-01

There is an increasing need to compare the results obtained with different methods of estimation of tree biomass in order to reduce the uncertainty in the assessment of forest biomass carbon. In this study, tree biomass was investigated in a 30-year-old Scots pine (Pinus sylvestris) (Young-Stand) and a 130-year-old mixed Norway spruce (Picea abies)-Scots pine stand (Mature-Stand) located in southern Finland (61º50' N, 24º22' E). In particular, a comparison of the results of different estimati...

Nutrient content of biomass components of Hamlin sweet orange trees

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Mattos Jr. Dirceu

2003-01-01

Full Text Available The knowledge of the nutrient distribution in trees is important to establish sound nutrient management programs for citrus production. Six-year-old Hamlin orange trees [Citrus sinensis (L. Osb.] on Swingle citrumelo [Poncirus trifoliata (L. Raf. x Citrus paradisi Macfad.] rootstock, grown on a sandy Entisol in Florida were harvested to investigate the macro and micronutrient distributions of biomass components. The biomass of aboveground components of the tree represented the largest proportion of the total. The distribution of the total tree dry weight was: fruit = 30.3%, leaf = 9.7%, twig = 26.1%, trunk = 6.3%, and root = 27.8%. Nutrient concentrations of recent mature leaves were in the adequate to optimal range as suggested by interpretation of leaf analysis in Florida. Concentrations of Ca in older leaves and woody tissues were much greater than those in the other parts of the tree. Concentrations of micronutrients were markedly greater in fibrous root as compared to woody roots. Calcium made up the greatest amount of nutrient in the citrus tree (273.8 g per tree, followed by N and K (234.7 and 181.5 g per tree, respectively. Other macronutrients comprised about 11% of the total nutrient content of trees. The contents of various nutrients in fruits were: N = 1.20, K = 1.54, P = 0.18, Ca = 0.57, Mg = 0.12, S = 0.09, B = 1.63 x 10-3, Cu = 0.39 x 10-3, Fe = 2.1 x 10-3, Mn = 0.38 10-3, and Zn = 0.40 10-3 (kg ton-1. Total contents of N, K, and P in the orchard corresponded to 66.5, 52.0, and 8.3 kg ha-1, respectively, which were equivalent to the amounts applied annually by fertilization.

The Effect of Re-Planting Trees on Soil Microbial Communities in a Wildfire-Induced Subalpine Grassland

Directory of Open Access Journals (Sweden)

Ed-Haun Chang

2017-10-01

Full Text Available Wildfire often causes tremendous changes in ecosystems, particularly in subalpine and alpine areas, which are vulnerable due to severe climate conditions such as cold temperature and strong wind. This study aimed to clarify the effect of tree re-planting on ecosystem services such as the soil microbial community after several decades. We compared the re-planted forest and grassland with the mature forest as a reference in terms of soil microbial biomass C and N (Cmic and Nmic, enzyme activities, phospholipid fatty acids (PLFA composition, and denaturing gradient gel electrophoresis (DGGE. The Cmic and Nmic did not differ among the grassland, re-planted forest and mature forest soil; however, ratios of Cmic/Corg and Nmic/Ntot decreased from the grassland to re-planted forest and mature forest soil. The total PLFAs and those attributed to bacteria and Gram-positive and Gram-negative bacteria did not differ between the re-planted forest and grassland soil. Principle component analysis of the PLFA content separated the grassland from re-planted forest and mature forest soil. Similarly, DGGE analysis revealed changes in both bacterial and fungal community structures with changes in vegetation. Our results suggest that the microbial community structure changes with the re-planting of trees after a fire event in this subalpine area. Recovery of the soil microbial community to the original state in a fire-damaged site in a subalpine area may require decades, even under a re-planted forest.

The within-season and between-tree distribution of imidacloprid trunk-injected into Acer platanoides (Sapindales: Sapindaceae).

Science.gov (United States)

Ugine, Todd A; Gardescu, Sana; Hajek, Ann E

2013-04-01

Norway maple trees, Acer platanoides L. (Sapindales: Sapindaceae), that were trunk-injected with imidacloprid as part of an Asian longhorned beetle eradication program, were used to study the temporal and between-tree distribution of imidacloprid in twigs from June through September. The effect of injection time during spring on imidacloprid residues across the summer season and the distribution of imidacloprid in twig bark versus twig xylem were also investigated. Overall, we observed a significant decline in imidacloprid concentrations within each plant part sampled across the study period, although the 19 trees used in the study varied greatly in the pattern of imidacloprid residues over time. The concentration of imidacloprid in twig bark per dry mass was approximately two times higher than that of the twig xylem (means +/- SD of 1.21 +/- 2.16 ppm vs. 0.63 +/- 1.08 ppm imidacloprid, respectively). The majority (> 50%) of whole twig, twig bark and twig xylem samples from injected trees contained 5 ppm imidacloprid, with a maximum of 49 ppm. The concentrations ofimidacloprid in whole twigs, twig bark, and twig xylem were highly correlated, and levels in leaves were correlated with imidacloprid levels in whole twigs.

Canopy structure and tree condition of young, mature, and old-growth Douglas-fir/hardwood forests

Science.gov (United States)

B.B. Bingham; J.O. Sawyer

1992-01-01

Sixty-two Douglas-fir/hardwood stands ranging from 40 to 560 years old were used to characterize the density; diameter, and height class distributions of canopy hardwoods and conifers in young (40 -100 yr), mature (101 - 200 yr) and old-growth (>200 yr) forests. The crown, bole, disease, disturbance, and cavity conditions of canopy conifers and hardwoods were...

An elastic network model of HK97 capsid maturation.

Science.gov (United States)

Kim, Moon K; Jernigan, Robert L; Chirikjian, Gregory S

2003-08-01

The structure of the capsid of bacteriophage HK97 has been solved at various stages of maturity by crystallography and cryo-electron microscopy, and has been reported previously in the literature. Typically the capsid assembles through polymerization and maturation processes. Maturation is composed of proteolytic cleavages to the precursor capsid (called Prohead II), expansion triggered by DNA packaging (in which the largest conformational changes of the capsid appear), and covalent cross-links of neighboring subunits to create the mature capsid called Head II. We apply a coarse-grained elastic network interpolation (ENI) to generate a feasible pathway for conformational change from Prohead II to Head II. The icosahedral symmetry of the capsid structure offers a significant computational advantage because it is not necessary to consider the whole capsid structure but only an asymmetric unit consisting of one hexamer plus an additional subunit from an adjacent pentamer. We also analyze normal modes of the capsid structure using an elastic network model which is also subject to symmetry constraints. Using our model, we can visualize the smooth evolution of capsid expansion and revisit in more detail several interesting geometric changes recognized in early experimental works such as rigid body motion of two compact domains (A and P) with two refolding extensions (N-arm and E-loop) and track the approach of the two particular residues associated with isopeptide bonds that make hexagonal cross-links in Head II. The feasibility of the predicted pathway is also supported by the results of our normal mode analysis.

Structural Evolution of Kerogen and Bitumen during Thermal Maturation examined by Fourier-Transform Infrared Spectroscopy

Science.gov (United States)

Craddock, P. R.; Le Doan, T. V.; Pomerantz, A.

2014-12-01

Kerogen—the organic matter that is solid and insoluble in organic solvents—is a key component of organic-rich mudstones. The composition of kerogen affects the storage and transport of hydrocarbons in these unconventional resources and is known to change with thermal maturity. We report here using FTIR spectroscopy, the compositional characteristics of kerogen as a function of thermal maturity, together with the compositional characteristics of the organic phase, bitumen—the organic matter that is solid, but soluble in organic solvents. Kerogen is consumed during thermal maturation, whereas bitumen is an intermediary formed at low maturity from kerogen and consumed at higher maturities in formation of oil and gas. Bitumen relative to kerogen has higher aliphatic content, lower aromatic content, and lower abundance of oxygenated functions. At low maturity (vitrinite reflectance equivalent VRe ~ 0.5-0.9 %), the average length of aliphatic chains in bitumen increases during bitumen formation. At higher thermal maturities (VRe > 1.0-1.3 %), average aliphatic chain length decreases as bitumen is consumed. This evolution contrasts to that in kerogen, where aliphatic chain lengths shorten during all stages of maturation. Breakdown of kerogen appears to be driven by cleavage of oxygen functions at low maturity and removal of aliphatic carbons at higher maturities. These aliphatic-rich fragments may comprise the bitumen, and may in part explain the solubility of bitumen in organic solvents. Bitumen shows evidence of oxidation at low thermal maturity, a phenonemom not documented for kerogen. Bitumen maturation and degradation at higher thermal maturity is driven by cleavage and loss of aliphatic carbons, and is coincident with the maximum generation of oil and gas. The aromatic content of bitumen and of kerogen both increase during maturation as a consequence of the loss of aliphatic carbon. The oil and gas generation potential of the residual organic matter thus

Proceedings of the 8. biennial residual wood conference

Energy Technology Data Exchange (ETDEWEB)

NONE

2009-07-01

This conference highlighted practical strategies for managing and utilizing residual wood as a true industry resource. Examples of successful wood energy projects were presented along with the technology and products of more than 30 companies involved in the residual wood business. The topics of discussion ranged from biomass supplies, quality issues, and harvesting guidelines to emerging biomass technologies, project overviews, and financing. The presentations outlined the many opportunities that exist for the forest industry to produce energy from biostock, such as healthy and diseased trees, underbrush, sawdust, wood chips, wood pulp and black liquor. Increasing fuel and energy costs along with advances in technology are improving the economy of forest-based biorefineries. The presentations showed how the industry can gain revenue from residual wood, which is steadily becoming a more valuable resource for pellet production and energy generation The conference featured 20 presentations, of which 3 have been catalogued separately for inclusion in this database. refs., tabs., figs.

Simulated root dynamics of a 160-year-old sugar maple (Acer saccharum Marsh.) tree with and without ozone exposure using the TREGRO model.

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Retzlaff, W. A.; Weinstein, D. A.; Laurence, J. A.; Gollands, B.

1996-01-01

Because of difficulties in directly assessing root responses of mature forest trees exposed to atmospheric pollutants, we have used the model TREGRO to analyze the effects of a 3- and a 10-year exposure to ozone (O(3)) on root dynamics of a simulated 160-year-old sugar maple (Acer saccharum Marsh.) tree. We used existing phenological, allometric, and growth data to parameterize TREGRO to produce a simulated 160-year-old tree. Simulations were based on literature values for sugar maple fine root production and senescence and the photosynthetic responses of sugar maple seedlings exposed to O(3) in open-top chambers. In the simulated 3-year exposure to O(3), 2 x ambient atmospheric O(3) concentrations reduced net carbon (C) gain of the 160-year-old tree. This reduction occurred in the C storage pools (total nonstructural carbohydrate, TNC), with most of the reduction occurring in coarse (woody) roots. Total fine root production and senescence were unaffected by the simulated 3-year exposure to O(3). However, extending the simulated O(3) exposure period to 10 years depleted the TNC pools of the coarse roots and reduced total fine root production. Similar reductions in TNC pools have been observed in forest-grown sugar maple trees exhibiting symptoms of stress. We conclude that modeling can aid in evaluating the belowground response of mature forest trees to atmospheric pollution stress and could indicate the potential for gradual deterioration of tree health under conditions of long-term stress, a situation similar to that underlying the decline of sugar maple trees.

Rubber trees demonstrate a clear retranslocation under seasonal drought and cold stresses

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Yuwu Li

2016-12-01

Full Text Available Having been introduced to the northern edge of Asian tropics, the rubber tree (Hevea brasiliensis has become deciduous in this climate with seasonal drought and cold stresses. To determine its internal nutrient strategy during leaf senescence and deciduous periods, we investigated mature leaf and senescent leaf nutrients, water-soluble soil nutrients and characteristics of soil microbiota in nine different ages of monoculture rubber plantations. Rubber trees demonstrate complicated retranslocation of N, P and K during foliar turnover. Approximately 50.26% of leaf nutrients and 21.47% of soil nutrients were redistributed to the rubber tree body during the leaf senescence and withering stages. However, no significant changes in the structure- or function-related properties of soil microbes were detected. These nutrient retranslocation strategy may be important stress responses. In the nutrient retranslocation process, soil plays a dual role as nutrient supplier and nutrient bank. Soil received the nutrients from abscissed leaves, and also supplied nutrients to trees in the non-growth stage. Nutrient absorption and accumulation began before the leaves started to wither and fall.

Drought stress, growth and nonstructural carbohydrate dynamics of pine trees in a semi-arid forest.

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Klein, Tamir; Hoch, Günter; Yakir, Dan; Körner, Christian

2014-09-01

In trees exposed to prolonged drought, both carbon uptake (C source) and growth (C sink) typically decrease. This correlation raises two important questions: (i) to what degree is tree growth limited by C availability; and (ii) is growth limited by concurrent C storage (e.g., as nonstructural carbohydrates, NSC)? To test the relationships between drought, growth and C reserves, we monitored the changes in NSC levels and constructed stem growth chronologies of mature Pinus halepensis Miller trees of three drought stress levels growing in Yatir forest, Israel, at the dry distribution limit of forests. Moderately stressed and stressed trees showed 34 and 14% of the stem growth, 71 and 31% of the sap flux density, and 79 and 66% of the final needle length of healthy trees in 2012. In spite of these large reductions in growth and sap flow, both starch and soluble sugar concentrations in the branches of these trees were similar in all trees throughout the dry season (2-4% dry mass). At the same time, the root starch concentrations of moderately stressed and stressed trees were 47 and 58% of those of healthy trees, but never drought there is more than one way for a tree to maintain a positive C balance. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Growing the urban forest: tree performance in response to biotic and abiotic land management

Science.gov (United States)

Emily E. Oldfield; Alexander J. Felson; D. S. Novem Auyeung; Thomas W. Crowther; Nancy F. Sonti; Yoshiki Harada; Daniel S. Maynard; Noah W. Sokol; Mark S. Ashton; Robert J. Warren; Richard A. Hallett; Mark A. Bradford

2015-01-01

Forests are vital components of the urban landscape because they provide ecosystem services such as carbon sequestration, storm-water mitigation, and air-quality improvement. To enhance these services, cities are investing in programs to create urban forests. A major unknown, however, is whether planted trees will grow into the mature, closed-canopied forest on which...

The contribution of competition to tree mortality in old-growth coniferous forests

Science.gov (United States)

Das, A.; Battles, J.; Stephenson, N.L.; van Mantgem, P.J.

2011-01-01

Competition is a well-documented contributor to tree mortality in temperate forests, with numerous studies documenting a relationship between tree death and the competitive environment. Models frequently rely on competition as the only non-random mechanism affecting tree mortality. However, for mature forests, competition may cease to be the primary driver of mortality.We use a large, long-term dataset to study the importance of competition in determining tree mortality in old-growth forests on the western slope of the Sierra Nevada of California, U.S.A. We make use of the comparative spatial configuration of dead and live trees, changes in tree spatial pattern through time, and field assessments of contributors to an individual tree's death to quantify competitive effects.Competition was apparently a significant contributor to tree mortality in these forests. Trees that died tended to be in more competitive environments than trees that survived, and suppression frequently appeared as a factor contributing to mortality. On the other hand, based on spatial pattern analyses, only three of 14 plots demonstrated compelling evidence that competition was dominating mortality. Most of the rest of the plots fell within the expectation for random mortality, and three fit neither the random nor the competition model. These results suggest that while competition is often playing a significant role in tree mortality processes in these forests it only infrequently governs those processes. In addition, the field assessments indicated a substantial presence of biotic mortality agents in trees that died.While competition is almost certainly important, demographics in these forests cannot accurately be characterized without a better grasp of other mortality processes. In particular, we likely need a better understanding of biotic agents and their interactions with one another and with competition. ?? 2011.

Detection of Variation in Long-Term Micropropagated Mature Pistachio via DNA-Based Molecular Markers.

Science.gov (United States)

Akdemir, Hülya; Suzerer, Veysel; Tilkat, Engin; Onay, Ahmet; Çiftçi, Yelda Ozden

2016-12-01

Determination of genetic stability of in vitro-grown plantlets is needed for safe and large-scale production of mature trees. In this study, genetic variation of long-term micropropagated mature pistachio developed through direct shoot bud regeneration using apical buds (protocol A) and in vitro-derived leaves (protocol B) was assessed via DNA-based molecular markers. Randomly amplified polymorphic DNA (RAPD), inter-simple sequence repeat (ISSR), and amplified fragment length polymorphism (AFLP) were employed, and the obtained PIC values from RAPD (0.226), ISSR (0.220), and AFLP (0.241) showed that micropropagation of pistachio for different periods of time resulted in "reasonable polymorphism" among donor plant and its 18 clones. Mantel's test showed a consistence polymorphism level between marker systems based on similarity matrices. In conclusion, this is the first study on occurrence of genetic variability in long-term micropropagated mature pistachio plantlets. The obtained results clearly indicated that different marker approaches used in this study are reliable for assessing tissue culture-induced variations in long-term cultured pistachio plantlets.

Using Florida Keys Reference Sites As a Standard for Restoration of Forest Structure in Everglades Tree Islands

International Nuclear Information System (INIS)

Ross, M.S.; Sah, J.P.; Ruiz, P.L.; Ross, M.S.; Ogurcak, D.E.

2010-01-01

In south Florida, tropical hardwood forests (hammocks) occur in Everglades tree islands and as more extensive forests in coastal settings in the nearby Florida Keys. Keys hammocks have been less disturbed by humans, and many qualify as old-growth, while Everglades hammocks have received much heavier use. With improvement of tree island condition an important element in Everglades restoration efforts, we examined stand structure in 23 Keys hammocks and 69 Everglades tree islands. Based on Stand Density Index and tree diameter distributions, many Everglades hammocks were characterized by low stocking and under-representation in the smaller size classes. In contrast, most Keys forests had the dense canopies and open under stories usually associated with old-growth hardwood hammocks. Subject to the same caveats that apply to off-site references elsewhere, structural information from mature Keys hammocks can be helpful in planning and implementing forest restoration in Everglades tree islands. In many of these islands, such restoration might involve supplementing tree stocking by planting native trees to produce more complete site utilization and a more open under story.

The role of trees in agroecology and sustainable agriculture in the tropics.

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Leakey, Roger R B

2014-01-01

Shifting agriculture in the tropics has been replaced by sedentary smallholder farming on a few hectares of degraded land. To address low yields and low income both, the soil fertility, the agroecosystem functions, and the source of income can be restored by diversification with nitrogen-fixing trees and the cultivation of indigenous tree species that produce nutritious and marketable products. Biodiversity conservation studies indicate that mature cash crop systems, such as cacao and coffee with shade trees, provide wildlife habitat that supports natural predators, which, in turn, reduce the numbers of herbivores and pathogens. This review offers suggestions on how to examine these agroecological processes in more detail for the most effective rehabilitation of degraded land. Evidence from agroforestry indicates that in this way, productive and environmentally friendly farming systems that provide food and nutritional security, as well as poverty alleviation, can be achieved in harmony with wildlife.

Lethal trap trees: a potential option for emerald ash borer (Agrilus planipennis Fairmaire) management.

Science.gov (United States)

McCullough, Deborah G; Poland, Therese M; Lewis, Phillip A

2016-05-01

Economic and ecological impacts of ash (Fraxinus spp.) mortality resulting from emerald ash borer (EAB) (Agrilus planipennis Fairmaire) invasion are severe in forested, residential and urban areas. Management options include girdling ash trees to attract ovipositing adult beetles and then destroying infested trees before larvae develop or protecting ash with a highly effective, systemic emamectin benzoate insecticide. Injecting this insecticide and then girdling injected trees a few weeks later could effectively create lethal trap trees, similar to a bait-and-kill tactic, if girdling does not interfere with insecticide translocation. We compared EAB larval densities on girdled trees, trees injected with the emamectin benzoate insecticide, trees injected with the insecticide and then girdled 18-21 days later and untreated controls at multiple sites. Pretreatment larval densities did not differ among treatments. Current-year larval densities were higher on girdled and control trees than on any trees treated with insecticide at all sites. Foliar residue analysis and adult EAB bioassays showed that girdling trees after insecticide injections did not reduce insecticide translocation. Girdling ash trees to attract adult EAB did not reduce efficacy of emamectin benzoate trunk injections applied ≥ 18 days earlier and could potentially be used in integrated management programs to slow EAB population growth. © 2015 Society of Chemical Industry.

Numerical study of how creep and progressive stiffening affect the growth stress formation in trees

DEFF Research Database (Denmark)

Ormarsson, Sigurdur; Dahlblom, O.; Johansson, M.

2010-01-01

It is not fully understood how much growth stresses affect the final quality of solid timber products in terms of e.g. shape stability. It is for example difficult to predict the internal growth stress field within the tree stem. Growth stresses are progressively generated during the tree growth...... and they are highly influenced by climate, biologic and material related factors. To increase the knowledge of the stress formation a finite element model was created to study how the growth stresses develop during the tree growth. The model is an axisymmetric general plane strain model where material for all new...... annual rings is progressively added to the tree during the analysis. The material model used is based on the theory of small strains (where strains refer to the undeformed configuration which is good approximation for strains less than 4%) where so-called biological maturation strains (growth...

Weathering the storm: how lodgepole pine trees survive mountain pine beetle outbreaks.

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Erbilgin, Nadir; Cale, Jonathan A; Hussain, Altaf; Ishangulyyeva, Guncha; Klutsch, Jennifer G; Najar, Ahmed; Zhao, Shiyang

2017-06-01

Recent mountain pine beetle outbreaks in western North America killed millions of lodgepole pine trees, leaving few survivors. However, the mechanism underlying the ability of trees to survive bark beetle outbreaks is unknown, but likely involve phytochemicals such as monoterpenes and fatty acids that can drive beetle aggregation and colonization on their hosts. Thus, we conducted a field survey of beetle-resistant lodgepole pine (Pinus contorta) trees to retrospectively deduce whether these phytochemicals underlie their survival by comparing their chemistry to that of non-attacked trees in the same stands. We also compared beetle attack characteristics between resistant and beetle-killed trees. Beetle-killed trees had more beetle attacks and longer ovipositional galleries than resistant trees, which also lacked the larval establishment found in beetle-killed trees. Resistant trees contained high amounts of toxic and attraction-inhibitive compounds and low amounts of pheromone-precursor and synergist compounds. During beetle host aggregation and colonization, these compounds likely served three critical roles in tree survival. First, low amounts of pheromone-precursor (α-pinene) and synergist (mycrene, terpinolene) compounds reduced or prevented beetles from attracting conspecifics to residual trees. Second, high amounts of 4-allyanisole further inhibited beetle attraction to its pheromone. Finally, high amounts of toxic limonene, 3-carene, 4-allyanisole, α-linolenic acid, and linoleic acid inhibited beetle gallery establishment and oviposition. We conclude that the variation of chemotypic expression of local plant populations can have profound ecological consequences including survival during insect outbreaks.

Aerobic composting of digested residue eluted from dry methane fermentation to develop a zero-emission process.

Science.gov (United States)

Huang, Yu-Lian; Sun, Zhao-Yong; Zhong, Xiao-Zhong; Wang, Ting-Ting; Tan, Li; Tang, Yue-Qin; Kida, Kenji

2017-03-01

Digested residue remained at the end of a process for the production of fuel ethanol and methane from kitchen garbage. To develop a zero-emission process, the compostability of the digested residue was assessed to obtain an added-value fertilizer. Composting of the digested residue by adding matured compost and a bulking agent was performed using a lab-scale composting reactor. The composting process showed that volatile total solid (VTS) degradation mainly occurred during the first 13days, and the highest VTS degradation efficiency was about 27% at the end. The raw material was not suitable as a fertilizer due to its high NH 4 + and volatile fatty acids (VFAs) concentration. However, the composting process produced remarkable results; the physicochemical properties indicated that highly matured compost was obtained within 62days of the composting process, and the final N concentration, NO 3 - concentration, and the germination index (GI) at the end of the composting process was 16.4gkg -1 -TS, 9.7gkg -1 -TS, and 151%, respectively. Real-time quantitative PCR (qPCR) analysis of ammonia oxidizers indicated that the occurrence of nitrification during the composting of digested residue was attributed to the activity of ammonia-oxidizing bacteria (AOB). Copyright © 2017 Elsevier Ltd. All rights reserved.

[Hydraulic limitation on photosynthetic rate of old Populus simonii trees in sandy soil of north Shaanxi Province].

Science.gov (United States)

Zuo, Li-Xiang; Li, Yang-Yang; Chen, Jia-Cun

2014-06-01

'Old and dwarf trees' on the loess plateau region mainly occurred among mature trees rather than among small trees. To elucidate the mechanism of tree age on 'old and dwarf trees' formation, taking Populus simonii, a tree species that accounted for the largest portion of 'old and dwarf trees' on the loess plateau, as an example, the growth, photosynthesis and hydraulic traits of P. simonii trees with different ages (young: 13-15 years, mid-aged: 31-34 years, and old: 49-54 years) were measured. The results showed that the dieback length increased, and net photosynthetic rate, stomatal conductance, transpiration rate, and whole plant hydraulic conductance decreased significantly with the increasing tree age. Both net photosynthetic rate and stomatal conductance measured at different dates were significantly and positively related to the whole plant hydraulic conductance, suggesting that the decreasing photosynthetic rate of old trees was possibly caused by the declined hydraulic conductance. Although the resistance to cavitation in stems and leaves was stronger in old trees than in young and mid-aged trees, there were no differences in midday native stem embolization degree and leaf hydraulic conductance based on the vulnerability curve estimation, suggesting that the increased hydraulic resistance of the soil-root system is probably the most important reason for decreasing the whole plant hydraulic conductance of old trees.

Categorizing ideas about trees: a tree of trees.

Science.gov (United States)

Fisler, Marie; Lecointre, Guillaume

2013-01-01

The aim of this study is to explore whether matrices and MP trees used to produce systematic categories of organisms could be useful to produce categories of ideas in history of science. We study the history of the use of trees in systematics to represent the diversity of life from 1766 to 1991. We apply to those ideas a method inspired from coding homologous parts of organisms. We discretize conceptual parts of ideas, writings and drawings about trees contained in 41 main writings; we detect shared parts among authors and code them into a 91-characters matrix and use a tree representation to show who shares what with whom. In other words, we propose a hierarchical representation of the shared ideas about trees among authors: this produces a "tree of trees." Then, we categorize schools of tree-representations. Classical schools like "cladists" and "pheneticists" are recovered but others are not: "gradists" are separated into two blocks, one of them being called here "grade theoreticians." We propose new interesting categories like the "buffonian school," the "metaphoricians," and those using "strictly genealogical classifications." We consider that networks are not useful to represent shared ideas at the present step of the study. A cladogram is made for showing who is sharing what with whom, but also heterobathmy and homoplasy of characters. The present cladogram is not modelling processes of transmission of ideas about trees, and here it is mostly used to test for proximity of ideas of the same age and for categorization.

Aboveground tree growth varies with belowground carbon allocation in a tropical rainforest environment

Science.gov (United States)

J.W. Raich; D.A. Clark; L. Schwendenmann; Tana Wood

2014-01-01

Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the...

Effects of variable retention harvesting on natural tree regeneration in Pinus resinosa (red pine) forests

Science.gov (United States)

Margaret W. Roberts; Anthony W. D' Amato; Christel C. Kern; Brian J. Palik

2017-01-01

Concerns over loss of ecosystem function and biodiversity in managed forests have led to the development of silvicultural approaches that meet ecological goals as well as sustain timber production. Variable Retention Harvest (VRH) practices, which maintain mature overstory trees across harvested areas, have been suggested as an approach to balance these objectives;...

Dendrochronological Investigations of Valonia Oak Trees in Western Greece

Directory of Open Access Journals (Sweden)

Andreas Papadopoulos

2016-06-01

Full Text Available Background and Purpose: Valonia oak (Quercus ithaburensis subsp. macrolepis (Kotschy Hedge & Yalt. is an east Mediterranean endemic, xerothermic and deciduous tree of particular interest in forestry. There has been a growing demand lately to include the species in reforestations in Greece which also increased the interest to investigate its response to climate change. The main purpose of this research is to study valonia oak from a dendrochronological – dendroclimatological point of view within its Mediterranean distribution range. Materials and Methods: Sampling took place in characteristic valonia oak stands where cross sections or tree-cores were taken from 40 trees. The cross sections and the tree-cores were prepared and cross-dated using standard dendrochronological methods and tree-ring widths were measured to the nearest 0.001 mm using the Windendro software program. The ARSTAN program was used to standardize the tree-ring data and to calculate dendrochronological statistical parameters. The inter-annual variability of tree-ring width and the radial growth trend were examined. Finally, tree-ring widths to climate relationships were calculated by orthogonal regression in combination with the bootstrap procedure using master residual chronology and monthly precipitation, temperature data and scPDSI drought index, from October of the n-1 year up to November of the n year. Results: The master chronology of valonia oak trees in Western Greece reaches 365 years, with an average ring width of 0.89 mm and with mean sensitivity being 0.21. The variation of the tree-ring widths indicates the influence of climate and human intervention in the past. Tree-ring to climate relationships show that valonia oak growth is positively affected by precipitations in January and March and by drought reduction during June and July. Conclusions: Valonia oak in Western Greece is a species of great interest for dendrochronological and dendroclimatological studies

A highly conserved amino acid in VP1 regulates maturation of enterovirus 71.

Directory of Open Access Journals (Sweden)

Yong-Xin Zhang

2017-09-01

Full Text Available Enterovirus 71 (EV71 is the major causative agent of hand, foot and mouth disease (HFMD in children, causing severe clinical outcomes and even death. Here, we report an important role of the highly conserved alanine residue at position 107 in the capsid protein VP1 (VP1A107 in the efficient replication of EV71. Substitutional mutations of VP1A107 significantly diminish viral growth kinetics without significant effect on viral entry, expression of viral genes and viral production. The results of mechanistic studies reveal that VP1A107 regulates the efficient cleavage of the VP0 precursor during EV71 assembly, which is required, in the next round of infection, for the transformation of the mature virion (160S into an intermediate or A-particle (135S, a key step of virus uncoating. Furthermore, the results of molecular dynamic simulations and hydrogen-bond networks analysis of VP1A107 suggest that flexibility of the VP1 BC loop or the region surrounding the VP1107 residue directly correlates with viral infectivity. It is possible that sufficient flexibility of the region surrounding the VP1107 residue favors VP0 conformational change that is required for the efficient cleavage of VP0 as well as subsequent viral uncoating and viral replication. Taken together, our data reveal the structural role of the highly conserved VP1A107 in regulating EV71 maturation. Characterization of this novel determinant of EV71 virulence would promote the study on pathogenesis of Enteroviruses.

Late Maturation Steps Preceding Selective Nuclear Export and Egress of Progeny Parvovirus.

Science.gov (United States)

Wolfisberg, Raphael; Kempf, Christoph; Ros, Carlos

2016-06-01

Although the mechanism is not well understood, growing evidence indicates that the nonenveloped parvovirus minute virus of mice (MVM) may actively egress before passive release through cell lysis. We have dissected the late maturation steps of the intranuclear progeny with the aims of confirming the existence of active prelytic egress and identifying critical capsid rearrangements required to initiate the process. By performing anion-exchange chromatography (AEX), we separated intranuclear progeny particles by their net surface charges. Apart from empty capsids (EC), two distinct populations of full capsids (FC) arose in the nuclei of infected cells. The earliest population of FC to appear was infectious but, like EC, could not be actively exported from the nucleus. Further maturation of this early population, involving the phosphorylation of surface residues, gave rise to a second, late population with nuclear export potential. While capsid surface phosphorylation was strictly associated with nuclear export capacity, mutational analysis revealed that the phosphoserine-rich N terminus of VP2 (N-VP2) was dispensable, although it contributed to passive release. The reverse situation was observed for the incoming particles, which were dephosphorylated in the endosomes. Our results confirm the existence of active prelytic egress and reveal a late phosphorylation event occurring in the nucleus as a selective factor for initiating the process. In general, the process of egress of enveloped viruses is active and involves host cell membranes. However, the release of nonenveloped viruses seems to rely more on cell lysis. At least for some nonenveloped viruses, an active process before passive release by cell lysis has been reported, although the underlying mechanism remains poorly understood. By using the nonenveloped model parvovirus minute virus of mice, we could confirm the existence of an active process of nuclear export and further characterize the associated capsid

Senescence of Manilkara zapota trees and implications for large frugivorous birds in the Southern Yucatan Peninsula, Mexico

NARCIS (Netherlands)

Antonius Weterings, Martinus Jacobus; Weterings-Schonck, Suzanne Maria; Vester, Henricus Franciscus Maria; Calme, Sophie

2008-01-01

It has long been established that mature forests are mosaics of patches in different development phases but it has seldom explicitly been taken into account in ecological studies. We demonstrate here that these development phases, which are related to the population dynamics of trees, play an

NMR structure calculation for all small molecule ligands and non-standard residues from the PDB Chemical Component Dictionary

Energy Technology Data Exchange (ETDEWEB)

Yilmaz, Emel Maden; Güntert, Peter, E-mail: guentert@em.uni-frankfurt.de [Goethe University Frankfurt am Main, Center for Biomolecular Magnetic Resonance, Institute of Biophysical Chemistry (Germany)

2015-09-15

An algorithm, CYLIB, is presented for converting molecular topology descriptions from the PDB Chemical Component Dictionary into CYANA residue library entries. The CYANA structure calculation algorithm uses torsion angle molecular dynamics for the efficient computation of three-dimensional structures from NMR-derived restraints. For this, the molecules have to be represented in torsion angle space with rotations around covalent single bonds as the only degrees of freedom. The molecule must be given a tree structure of torsion angles connecting rigid units composed of one or several atoms with fixed relative positions. Setting up CYANA residue library entries therefore involves, besides straightforward format conversion, the non-trivial step of defining a suitable tree structure of torsion angles, and to re-order the atoms in a way that is compatible with this tree structure. This can be done manually for small numbers of ligands but the process is time-consuming and error-prone. An automated method is necessary in order to handle the large number of different potential ligand molecules to be studied in drug design projects. Here, we present an algorithm for this purpose, and show that CYANA structure calculations can be performed with almost all small molecule ligands and non-standard amino acid residues in the PDB Chemical Component Dictionary.

Development and acceptability testing of decision trees for self-management of prosthetic socket fit in adults with lower limb amputation.

Science.gov (United States)

Lee, Daniel Joseph; Veneri, Diana A

2018-05-01

The most common complaint lower limb prosthesis users report is inadequacy of a proper socket fit. Adjustments to the residual limb-socket interface can be made by the prosthesis user without consultation of a clinician in many scenarios through skilled self-management. Decision trees guide prosthesis wearers through the self-management process, empowering them to rectify fit issues, or referring them to a clinician when necessary. This study examines the development and acceptability testing of patient-centered decision trees for lower limb prosthesis users. Decision trees underwent a four-stage process: literature review and expert consultation, designing, two-rounds of expert panel review and revisions, and target audience testing. Fifteen lower limb prosthesis users (average age 61 years) reviewed the decision trees and completed an acceptability questionnaire. Participants reported agreement of 80% or above in five of the eight questions related to acceptability of the decision trees. Disagreement was related to the level of experience of the respondent. Decision trees were found to be easy to use, illustrate correct solutions to common issues, and have terminology consistent with that of a new prosthesis user. Some users with greater than 1.5 years of experience would not use the decision trees based on their own self-management skills. Implications for Rehabilitation Discomfort of the residual limb-prosthetic socket interface is the most common reason for clinician visits. Prosthesis users can use decision trees to guide them through the process of obtaining a proper socket fit independently. Newer users may benefit from using the decision trees more than experienced users.

Innate immune response development in nestling tree swallows

Science.gov (United States)

Stambaugh, T.; Houdek, B.J.; Lombardo, M.P.; Thorpe, P.A.; Caldwell, Hahn D.

2011-01-01

We tracked the development of innate immunity in nestling Tree Swallows (Tachycineta bicolor) and compared it to that of adults using blood drawn from nestlings during days 6, 12, and 18 of the ???20-day nestling period and from adults. Innate immunity was characterized using an in vitro assay of the ability of whole blood to kill Escherichia coli. The ability of whole blood to kill E. coli increased as nestlings matured. Neither this component of innate immunity nor right wing chord length on day18 were as developed as in adults indicating that development of the innate immune system and growth both continued after fledging. Narrow sense heritability analyses suggest that females with strong immune responses produced nestlings with strong immune responses. These data suggest nestling Tree Swallows allocated sufficient energy to support rapid growth to enable fledging by day 18, but that further development of innate immunity occurred post-fledging. ?? 2011 by the Wilson Ornithological Society.

The Influence of Residual Stand Densities on Regeneration in Sugar Maple Stands

Science.gov (United States)

Carl H. Tubbs

1968-01-01

Studies of regeneration 2, 5, and 10 years after cutting mature and overmature sugar maple stands to several residual densities show that (1) sugar maple is still the predominant species under all stand densities (2) nearly all regeneration reaching larger size classes became established before cutting (3) heavier cuttings (30, 50, and 70 square feet) are more rapidly...

Damages to soil and tree species by cable-skidding in Caspian forests of Iran

Energy Technology Data Exchange (ETDEWEB)

Tavankar, Farzam; Bonyad, Amir E.; Nikooy, Mehrdad; Picchio, Rodolfo; Venanzi, Rachele; Calienno, Luca

2017-11-01

Aim of study: The main aims of this study were to determine of damage level to residual stand and soil disturbance from mechanized selection logging. Area of study: Mixed beech stands in Caspian forests, northern Iran. Material and methods: Point-transect and systematic plot sampling were used for assessing damages to soil and trees, respectively. Main results: 89% of forest soil area was undisturbed or shallow disturbed, and 5.2% was deep disturbed. Soil bulk density of top 10 cm in the winching corridors, ruts and skid trails were increased 10.7%, 20.6% and 32.1% respectively than controlled area. Frequency of damages to regeneration and trees were 12% and 11.2%. The frequency of damages to regeneration was increased with increasing of their heights, but frequency of damages to trees was decreased with increasing of their diameter. The most type of damages was bole wounds in sizes of 100 to 200 cm2 within 1 m from the ground level, and deep wounds. The frequency of damages was different in tree species (p = 0.001). The mean size of bole wounds was 174 cm2, and the mean height of bole wounds was 70 cm from ground level. The intensity of wounds on trees bole were decreased with increasing of their heights from ground level (p = 0.02), while their sizes were increased (p = 0.001). Research highlights: Winching of logs was the main cause of damages to soil and residual stand. The detailed planning strategy will reduce damage to level which is acceptable and predictable.

Damages to soil and tree species by cable-skidding in Caspian forests of Iran

International Nuclear Information System (INIS)

Tavankar, Farzam; Bonyad, Amir E.; Nikooy, Mehrdad; Picchio, Rodolfo; Venanzi, Rachele; Calienno, Luca

2017-01-01

Aim of study: The main aims of this study were to determine of damage level to residual stand and soil disturbance from mechanized selection logging. Area of study: Mixed beech stands in Caspian forests, northern Iran. Material and methods: Point-transect and systematic plot sampling were used for assessing damages to soil and trees, respectively. Main results: 89% of forest soil area was undisturbed or shallow disturbed, and 5.2% was deep disturbed. Soil bulk density of top 10 cm in the winching corridors, ruts and skid trails were increased 10.7%, 20.6% and 32.1% respectively than controlled area. Frequency of damages to regeneration and trees were 12% and 11.2%. The frequency of damages to regeneration was increased with increasing of their heights, but frequency of damages to trees was decreased with increasing of their diameter. The most type of damages was bole wounds in sizes of 100 to 200 cm2 within 1 m from the ground level, and deep wounds. The frequency of damages was different in tree species (p = 0.001). The mean size of bole wounds was 174 cm2, and the mean height of bole wounds was 70 cm from ground level. The intensity of wounds on trees bole were decreased with increasing of their heights from ground level (p = 0.02), while their sizes were increased (p = 0.001). Research highlights: Winching of logs was the main cause of damages to soil and residual stand. The detailed planning strategy will reduce damage to level which is acceptable and predictable.

Recovery of crown mass for energy with whole-tree skidding methods; Puupolttoaineen tuottaminen kokopuujuontomenetelmillae

Energy Technology Data Exchange (ETDEWEB)

Nousiainen, I [Finntech Ltd Oy, Jyvaeskylae (Finland); Vesisenaho, T [VTT Energy, Jyvaeskylae (Finland)

1997-12-31

The main aim of the project `Recovery of crown mass for energy with whole-tree skidding methods` was to develop the integrated harvesting method of wood raw material and wood fuel based on whole-tree skidding. The developed method gives also the possibility to deliver to sawmills raw material in the form of log section. In the harvesting chain under development whole-trees are felled and bunched with a normal one-grip harvester. The whole-trees are skidded to the roadside by a forwarder equipped with a clam bunk. At the roadside the trees are delimbed and cut with the one-grip harvester used for felling and bunching. According to the results of the field tests the harvesting costs of logging residues are in certain final cutting conditions even under 10 FIM/m{sup 3}, when the average stem size is over 0,500 m{sup 3}. In the developed method felling and bunching of whole trees with the one-grip harvester and skidding of whole-trees with the clam skidder succeeded well. The problems of the method concentrate on delimbing and bucking of whole-trees in landing site

Recovery of crown mass for energy with whole-tree skidding methods; Puupolttoaineen tuottaminen kokopuujuontomenetelmillae

Energy Technology Data Exchange (ETDEWEB)

Nousiainen, I. [Finntech Ltd Oy, Jyvaeskylae (Finland); Vesisenaho, T. [VTT Energy, Jyvaeskylae (Finland)

1996-12-31

The main aim of the project `Recovery of crown mass for energy with whole-tree skidding methods` was to develop the integrated harvesting method of wood raw material and wood fuel based on whole-tree skidding. The developed method gives also the possibility to deliver to sawmills raw material in the form of log section. In the harvesting chain under development whole-trees are felled and bunched with a normal one-grip harvester. The whole-trees are skidded to the roadside by a forwarder equipped with a clam bunk. At the roadside the trees are delimbed and cut with the one-grip harvester used for felling and bunching. According to the results of the field tests the harvesting costs of logging residues are in certain final cutting conditions even under 10 FIM/m{sup 3}, when the average stem size is over 0,500 m{sup 3}. In the developed method felling and bunching of whole trees with the one-grip harvester and skidding of whole-trees with the clam skidder succeeded well. The problems of the method concentrate on delimbing and bucking of whole-trees in landing site

Stomata open at night in pole-sized and mature ponderosa pine: implications for O{sub 3} exposure metrics

Energy Technology Data Exchange (ETDEWEB)

Grulke, N. E.; Alonso, R.; Nguyen, T.; Dobrowolski, W. [USDA Forest Service, Pacific Southwest Station, Riverside, CA (United States); Cascio, C. [University of Florence, Firenze (Italy)

2004-09-01

Nighttime stomatal behaviour in two tree size stands of ponderosa pine are described. Ponderosa pine is one of the most ozone-sensitive conifers in western North America. The study involved measurement of time required to reach equilibrium in response to small increases in low irradiances at sites differing in environmental stressors. The contribution of nighttime ozone uptake to total daily ozone uptake in early and later summer was also investigated. Nighttime stomata conductance ranged between one tenth and one fifth that of maximum day-time values. Pole-size trees (i.e. less than 40 years old) showed greater ozone conductance than mature trees (i.e. over 250 years old). In June, nighttime ozone uptake accounted for 9, 5, and 3 per cent of the total daily ozone uptake of pole-sized trees. In late summer, ozone uptake at night was less than two percent of daily uptake at all sites. It is suspected that nighttime uptake of oxidants may have harmful physiological effects, such as contributing to the declining health of forest trees, owing to the fact that oxidants absorbed at night are not detoxified as well during the day. 67 refs.,1 tab., 8 figs.

Using bomb calorimetry for determination of risk indices of wildfires originating from pine residues

Energy Technology Data Exchange (ETDEWEB)

Nunez Regueira, L.; Rodriguez Anon, J.A.; Proupin Castineiras, J.; Vilanova Diz, A.; Romero Garcia, A. [Departamento de Fisica Aplicada, Facultade de Fisica, Universidade de Santiago de Compostela, Campus Sur, 15782 , A Coruna Santiago de Compostela (Spain)

2002-10-19

Pine trees, mainly Pinus pinaster Aiton, now cover 640,000ha of the forest occupied surface in Galicia. The possibility of using the residues originating from pine tree exploitation as an alternative energy source could yield to gross benefit around 2.8x10{sup 8} euros per year, together with ecological advantages.The object of the present study is the evaluation of the energy contained in these residues through the measurement of their caloric values using a static bomb calorimeter. At the same time, flammabilities were measured by a standard epiradiator thus allowing the calculation of risk indices. This latter is very important to fight and prevent the start and spreading of forest fires.Elementary chemical composition was also determined using an elementary chemical analyser. Biological and bioclimatic parameters, which are very useful for the evaluation of caloric values and flammabilities over the year, were used for discussion of results.

Flow regime effects on mature Populus fremontii (Fremont cottonwood) productivity on two contrasting dryland river floodplains

Science.gov (United States)

Andersen, Douglas C.

2016-01-01

I compared riparian cottonwood (Populus fremontii) productivity-discharge relationships in a relictual stand along the highly regulated Green River and in a naturally functioning stand along the unregulated Yampa River in semiarid northwest Colorado. I used multiple regression to model flow effects on annual basal area increment (BAI) from 1982 to 2011, after removing any autocorrelation present. Each BAI series was developed from 20 trees whose mean size (67 cm diameter at breast height [DBH]) was equivalent in the two stands. BAI was larger in the Yampa River stand except in 2 y when defoliating leaf beetles were present there. I found no evidence for a Yampa flood-magnitude threshold above which BAI declined. Flow variables explained ∼45% of residual BAI variability, with most explained by current-year maximum 90-d discharge (QM90) in the Yampa River stand and by a measure of the year-to-year change in QM90 in the Green River stand. The latter reflects a management-imposed ceiling on flood magnitude—Flaming Gorge Dam power plant capacity—infrequently exceeded during the study period. BAI in the relictual stand began to trend upward in 1992 when flows started to mimic a natural flow regime. Mature Fremont cottonwoods appear to be ecologically resilient. Their productivity along regulated rivers might be optimized using multiyear environmental flow designs.

Growing trees in child brains: graph theoretical analysis of electroencephalography-derived minimum spanning tree in 5- and 7-year-old children reflects brain maturation.

Science.gov (United States)

Boersma, Maria; Smit, Dirk J A; Boomsma, Dorret I; De Geus, Eco J C; Delemarre-van de Waal, Henriette A; Stam, Cornelis J

2013-01-01

The child brain is a small-world network, which is hypothesized to change toward more ordered configurations with development. In graph theoretical studies, comparing network topologies under different conditions remains a critical point. Constructing a minimum spanning tree (MST) might present a solution, since it does not require setting a threshold and uses a fixed number of nodes and edges. In this study, the MST method is introduced to examine developmental changes in functional brain network topology in young children. Resting-state electroencephalography was recorded from 227 children twice at 5 and 7 years of age. Synchronization likelihood (SL) weighted matrices were calculated in three different frequency bands from which MSTs were constructed, which represent constructs of the most important routes for information flow in a network. From these trees, several parameters were calculated to characterize developmental change in network organization. The MST diameter and eccentricity significantly increased, while the leaf number and hierarchy significantly decreased in the alpha band with development. Boys showed significant higher leaf number, betweenness, degree and hierarchy and significant lower SL, diameter, and eccentricity than girls in the theta band. The developmental changes indicate a shift toward more decentralized line-like trees, which supports the previously hypothesized increase toward regularity of brain networks with development. Additionally, girls showed more line-like decentralized configurations, which is consistent with the view that girls are ahead of boys in brain development. MST provides an elegant method sensitive to capture subtle developmental changes in network organization without the bias of network comparison.

Propoxur (2-iso propoxy-phenyl-N-methylcarbamate) residues in cocoa beans. Part of a coordinated programme on isotopic-tracer aided studies of chemical residues in cotton seed, feed, oil and related products

International Nuclear Information System (INIS)

Adomako, D.

1982-05-01

Pod-bearing Amazon and Amelonado cocoa plants were sprayed with Unden 20% (propoxur, arprocarb, baygon) at the recommended rate of 210 g a.i./ha and twice the recommended rate at monthly intervals from July to October 1976, and cured beans from the ripe pods analysed for propoxur residues by gas chromatography. In a radiotracer study with 14 C-labelled propoxur, the effect of processing methods on residues and systemic uptake of propoxur from insecticide deposits on pod surfaces were also investigated. Residues did not exceed 0.03 mg/kg. There was no relationship between residues and harvesting time, cocoa type or rate of application. Contamination of beans with insecticide deposits on the pod surface during processing, and systemic uptake of insecticide from pod surfaces were negligible. Experiments were also designed to provide data on 14 C-propoxur residues in cocoa beans, uptake of the chemical from pod surfaces and persistence on the leaves and in the soil. Leaves were picked from the lowest five branches of the cocoa trees, 13 months after the application of 14 C-propoxur, dried at 80 0 for 4 days, stored and analysed for their 14 C-activity. Soil samples were collected at 15 cm and 30 cm distances from the trunk base of treated trees, dried, stored and analysed. The analytical procedure involved extraction and clean-up steps after a standard method using acetone, chloroform and a coagulating agent. Propoxur residues in cocoa leaves collected 13 months after the insecticide application ranged from 0.01 to 0.04 mg/kg. Residues in shells from cocoa pods treated with 14 C-propoxur 2 months prior to harvest did not exceed 0.02 mg/kg. Propoxur residues in soil samples collected at 6, 16, and 19 months following application ranged from 0.01 to 0.03 mg/kg. These low levels are probably related to volatilization and heavy rains. Possible binding to soil cannot be precluded. The low levels of propoxur are unlikely to present any toxicological hazard to humans

Production of fuel ethanol from steam-explosion pretreated olive tree pruning

Energy Technology Data Exchange (ETDEWEB)

Cristobal Cara; Encarnacion Ruiz; Mercedes Ballesteros; Paloma Manzanares; Ma Jose Negro; Eulogio Castro [University of Jaen, Jaen (Spain). Department of Chemical, Environmental and Materials Engineering

2008-05-15

This work deals with the production of fuel ethanol from olive tree pruning. This raw material is a renewable, low cost, largely available, and lacking of economic alternatives agricultural residue. Olive tree pruning was submitted to steam explosion pre-treatment in the temperature range 190-240{sup o}C, with or without previous impregnation by water or sulphuric acid solutions. The influence of both pre-treatment temperature and impregnation conditions on sugar and ethanol yields was investigated by enzymatic hydrolysis and simultaneous saccharification and fermentation on the pretreated solids. Results show that the maximum ethanol yield (7.2 g ethanol/100 g raw material) is obtained from water impregnated, steam pretreated residue at 240{sup o}C. Nevertheless if all sugars solubilized during pre-treatment are taken into account, up to 15.9 g ethanol/100 g raw material may be obtained (pre-treatment conditions: 230{sup o}C and impregnation with 1% w/w sulphuric acid concentration), assuming theoretical conversion of these sugars to ethanol. 29 refs., 2 figs., 5 tabs.

Tsunami damping by mangrove forest: a laboratory study using parameterized trees

Directory of Open Access Journals (Sweden)

A. Strusińska-Correia

2013-02-01

Full Text Available Tsunami attenuation by coastal vegetation was examined under laboratory conditions for mature mangroves Rhizophora sp. The developed novel tree parameterization concept, accounting for both bio-mechanical and structural tree properties, allowed to substitute the complex tree structure by a simplified tree model of identical hydraulic resistance. The most representative parameterized mangrove model was selected among the tested models with different frontal area and root density, based on hydraulic test results. The selected parameterized tree models were arranged in a forest model of different width and further tested systematically under varying incident tsunami conditions (solitary waves and tsunami bores. The damping performance of the forest models under these two flow regimes was compared in terms of wave height and force envelopes, wave transmission coefficient as well as drag and inertia coefficients. Unlike the previous studies, the results indicate a significant contribution of the foreshore topography to solitary wave energy reduction through wave breaking in comparison to that attributed to the forest itself. A similar rate of tsunami transmission (ca. 20% was achieved for both flow conditions (solitary waves and tsunami bores and the widest forest (75 m in prototype investigated. Drag coefficient C_D attributed to the solitary waves tends to be constant (C_D = 1.5 over the investigated range of the Reynolds number.

First report of Pestalotiopsis diospyri causing canker on persimmon trees

Directory of Open Access Journals (Sweden)

Giselda Alves

2011-09-01

Full Text Available During 2006 to 2009 season symptoms of a canker disease were observed on twigs and branches of young and mature persimmon trees (Diospyros kaki L. cv. Fuyu in the States of Santa Catarina and Paraná in the Southern Brazil. The cankers result in severe damage and reduced production. Isolations from the margins of these cankers revealed a genus of Pestalotiopsis. Koch's postulates were confirmed using two isolates of the pathogen which was identified as Pestalotiopsis diospyri.

AFM-based force spectroscopy measurements of mature amyloid fibrils of the peptide glucagon

DEFF Research Database (Denmark)

Dong, M. D.; Hovgaard, M. B.; Mamdouh, W.

2008-01-01

We report on the mechanical characterization of individual mature amyloid fibrils by atomic force microscopy (AFM) and AFM-based single-molecule force spectroscopy (SMFS). These self-assembling materials, formed from the 29-residue amphiphatic peptide hormone glucagon, were found to display...... a reversible elastic behaviour. Based on AFM morphology and SMFS studies, we suggest that the observed elasticity is due to a force-induced conformational transition which is reversible due to the beta-helical conformation of protofibrils, allowing a high degree of extension. The elastic properties...... of such mature fibrils contribute to their high stability, suggesting that the internal hydrophobic interactions of amyloid fibrils are likely to be of fundamental importance in the assembly of amyloid fibrils and therefore for the understanding of the progression of their associated pathogenic disorders...

Crop load and harvest maturity effects on consumer preferences for apricots.

Science.gov (United States)

Stanley, Jill; Feng, Jinquan; Olsson, Shane

2015-03-15

Improving apricot fruit quality delivered to consumers is key to ensuring a successful apricot industry. Previous studies have focused on effects of either soluble solids content (SSC) or fruit firmness on consumer preferences, and results have been equivocal. This study evaluated the effects of crop load and harvest maturity how they affected on fruit SSC and firmness, and on subsequent consumer preferences. SSC of apricots was an important factor only when fruit were firmer than 15 N and not immature. When fruit were softer than 15 N, SSC had little influence on consumer liking. In general, consumers preferred fruit that were grown on trees thinned to approximately 10-20% less than typical commercial crop loads and were harvested in a more mature condition. Consumers also preferred fruit that had a higher sugar/acid ratio or BrimA value, which is the °Brix - k × titratable acidity, where k is a constant that varies between species and cultivars depending on the specific acids and sugars present. High apricot flavour and juiciness were associated with greater sweetness. Management practices that increase fruit SSC and sugar/acid ratio, such as reducing crop load, will improve consumer satisfaction as long as fruit are harvested at an adequate maturity stage and are maintained in storage so that they do not soften too quickly. © 2014 Society of Chemical Industry.

Regulating gonad inhibition and vitellogenin/vitellin induction in Penaeus monodon using mature GIH fusion protein and polyclonal antisera

Digital Repository Service at National Institute of Oceanography (India)

Vrinda, S.; Jasmin, C.; Sivakumar, K.C.; Jose, S.; Jose, B.; Philip, R; BrightSingh, I

September 2016 Available online 15 September 2016 Keywords: Gonad-inhibiting hormone (GIH) Fusion/chimeric proteinaa r t i c l e i n f o b s t r a c tRegulating gonad inhibition and vitellogen Penaeus monodon using mature GIH fusion polyclonal antisera... restriction site overhangs to match with that of the expression vector; pET32a+. The forward primer (GIH-F- 5′-GAAT TCAACATCCTGGACAGCAAATGCAGGGGTGC-3′) contained EcoR I site (italics) and 29 nucleotide residues encoding the N terminal amino acid residues...

The effects of logging residue extraction for energy on ecosystem services and biodiversity: A synthesis.

Science.gov (United States)

Ranius, Thomas; Hämäläinen, Aino; Egnell, Gustaf; Olsson, Bengt; Eklöf, Karin; Stendahl, Johan; Rudolphi, Jörgen; Sténs, Anna; Felton, Adam

2018-03-01

We review the consequences for biodiversity and ecosystem services from the industrial-scale extraction of logging residues (tops, branches and stumps from harvested trees and small-diameter trees from thinnings) in managed forests. Logging residue extraction can replace fossil fuels, and thus contribute to climate change mitigation. The additional biomass and nutrients removed, and soils and other structures disturbed, have several potential environmental impacts. To evaluate potential impacts on ecosystem services and biodiversity we reviewed 279 scientific papers that compared logging residue extraction with non-extraction, the majority of which were conducted in Northern Europe and North America. The weight of available evidence indicates that logging residue extraction can have significant negative effects on biodiversity, especially for species naturally adapted to sun-exposed conditions and the large amounts of dead wood that are created by large-scaled forest disturbances. Slash extraction may also pose risks for future biomass production itself, due to the associated loss of nutrients. For water quality, reindeer herding, mammalian game species, berries, and natural heritage the results were complicated by primarily negative but some positive effects, while for recreation and pest control positive effects were more consistent. Further, there are initial negative effects on carbon storage, but these effects are transient and carbon stocks are mostly restored over decadal time perspectives. We summarize ways of decreasing some of the negative effects of logging residue extraction on specific ecosystem services, by changing the categories of residue extracted, and site or forest type targeted for extraction. However, we found that suggested pathways for minimizing adverse outcomes were often in conflict among the ecosystem services assessed. Compensatory measures for logging residue extraction may also be used (e.g. ash recycling, liming, fertilization

Dermal insecticide residues from birds inhabiting an orchard

Science.gov (United States)

Vyas, N.B.; Spann, J.W.; Hulse, C.S.; Gentry, S.; Borges, S.L.

2007-01-01

The US Environmental Protection Agency conducts risk assessments of insecticide applications to wild birds using a model that is limited to the dietary route of exposure. However, free-flying birds are also exposed to insecticides via the inhalation and dermal routes. We measured azinphos-methyl residues on the skin plus feathers and the feet of brown-headed cowbirds (Molothrus ater) in order to quantify dermal exposure to songbirds that entered and inhabited an apple (Malus x domestica) orchard following an insecticide application. Exposure to azinphos-methyl was measured by sampling birds from an aviary that was built around an apple tree. Birds sampled at 36 h and 7-day post-application were placed in the aviary within 1 h after the application whereas birds exposed for 3 days were released into the aviary 4-day post-application. Residues on vegetation and soil were also measured. Azinphos-methyl residues were detected from the skin plus feathers and the feet from all exposure periods. Our results underscore the importance of incorporating dermal exposure into avian pesticide risk assessments.

Assessment of cortical maturation with prenatal MRI. Part I: normal cortical maturation

Energy Technology Data Exchange (ETDEWEB)

Fogliarini, Celine [Faculte Timone, Centre de Resonance Magnetique Biologique et Medicale, Marseille (France); Chaumoitre, Katia [Hopital Nord, Department of Radiology, Marseille (France); Chapon, Frederique; Levrier, Olivier; Girard, Nadine [Hopital Timone, Department of Neuroradiology, Marseille Cedex 5 (France); Fernandez, Carla; Figarella-Branger, Dominique [Hopital Timone, Department of Pathology, Marseille (France)

2005-08-01

Cortical maturation, especially gyral formation, follows a temporospatial schedule and is a good marker of fetal maturation. Although ultrasonography is still the imaging method of choice to evaluate fetal anatomy, MRI has an increasingly important role in the detection of brain abnormalities, especially of cortical development. Knowledge of MRI techniques in utero with the advantages and disadvantages of some sequences is necessary, in order to try to optimize the different magnetic resonance sequences to be able to make an early diagnosis. The different steps of cortical maturation known from histology represent the background necessary for the understanding of maturation in order to be then able to evaluate brain maturation through neuroimaging. Illustrations of the normal cortical maturation are given for each step accessible to MRI for both the cerebral hemispheres and the posterior fossa. (orig.)

Assessment of cortical maturation with prenatal MRI. Part I: normal cortical maturation

International Nuclear Information System (INIS)

Fogliarini, Celine; Chaumoitre, Katia; Chapon, Frederique; Levrier, Olivier; Girard, Nadine; Fernandez, Carla; Figarella-Branger, Dominique

2005-01-01

Cortical maturation, especially gyral formation, follows a temporospatial schedule and is a good marker of fetal maturation. Although ultrasonography is still the imaging method of choice to evaluate fetal anatomy, MRI has an increasingly important role in the detection of brain abnormalities, especially of cortical development. Knowledge of MRI techniques in utero with the advantages and disadvantages of some sequences is necessary, in order to try to optimize the different magnetic resonance sequences to be able to make an early diagnosis. The different steps of cortical maturation known from histology represent the background necessary for the understanding of maturation in order to be then able to evaluate brain maturation through neuroimaging. Illustrations of the normal cortical maturation are given for each step accessible to MRI for both the cerebral hemispheres and the posterior fossa. (orig.)

Safe apples for baby-food production: survey of pesticide treatment regimes leaving minimum residues.

Science.gov (United States)

Ticha, Jana; Hajslova, Jana; Kovalczuk, Tomas; Jech, Martin; Honzicek, Jiri; Kocourek, Vladimir; Lansky, Miroslav; Kloutvorova, Jana; Falta, Vladan

2007-06-01

A total of 19 pesticide preparations were used according to agricultural practice in six trials in apple orchards. Using gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-tandem mass spectrometry (LC-MS/MS), premature Golden Delicious apples collected 64, 50, 36 days before harvest and mature fruit were examined for residues of active ingredients. No residues of triflumuron, triazamate, chlorpyrifos, etofenprox, fenoxycarb, kresoxim-methyl, cyprodinyl, difenoconazole or thiram were detected in the first sampling. Also, the levels of chlorpyrifos-methyl, penconazole, tebuconazole and tolylfluanid dropped during the pre-harvest interval. Detectable residues of pyridaben, thiacloprid, trifloxystrobin and tetraconazole in harvested fruits were below 0.01 mg kg(-1), which is the maximum concentration of residues acceptable by baby-food producers in any raw material. The only residues exceeding this concentration were captan and teflubenzuron. Based on the data, farmers can choose pesticides for optimal treatment of plants, while enabling growth of a safe crop suitable for baby-food production.

STANDING HERBAGE BIOMASS UNDER DIFFERENT TREE SPECIES DISPERSED IN PASTURES OF CATTLE FARMS

Directory of Open Access Journals (Sweden)

Humberto Esquivel-Mimenza

2013-08-01

Full Text Available The study conducted in a tropical dry ecosystem at Cañas, Guanacaste, Costa Rica (10o 11´ N and 84o15´W measure the standing herbage biomass (SHB availability and quality under six isolated tree species of different canopy architecture dispersed in active Brachiaria brizantha pastures and compare it to that growing at full sun light. Standing herbage biomass (HB harvesting and Photosynthetic active radiation (PAR readings were taken at three different periods in a paired sample scheme. Of the six tree species studied, Enterolobium cyclocarpum had the largest mean crown cover while Acrocomia aculeata had the smallest. Significant differences were observed between species (P = 0.0002 and seasons (P<0.008 for the percentage of PAR transmitted under the canopy but PAR levels obtained under all species were consistent throughout seasons since the interaction between species and season was not significantly different (P=0.98. Lower PAR readings (<50% were taken under the canopies E. cyclocarpum and Guazuma ulmifolia (21.7 and 33.7 % respectively. Standing herbage biomass (SHB harvested under the crown of isolated mature individual tree species was significantly lower (P<0.001 than in open pasture areas for all tree species except that of A. aculeate but SHB crude protein content, was higher underneath all tree canopies. It can conclude that light reduction caused by tree canopies reduces SHB availability and increases the quality underneath tree canopies compared to areas of full sun but these varies accordingly to tree species and seasons.

ORGANIZATIONAL PROJECT MANAGEMENT MATURITY

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Yana Derenskaya

2017-11-01

Full Text Available The present article is aimed at developing a set of recommendations for achieving a higher level of organizational project maturity at a given enterprise. Methodology. For the purposes of the current research, the available information sources on the components of project management system are analysed; the essence of “organizational maturity” and the existing models of organizational maturity are studied. The method of systemic and structural analysis, as well as the method of logical generalization, are employed in order to study the existing models of organizational maturity, to describe levels of organizational maturity, and finally to develop a set of methodological recommendations for achieving a higher level of organizational project maturity at a given enterprise. The results of the research showed that the core elements of project management system are methodological, organizational, programtechnical, and motivational components. Project management encompasses a wide range of issues connected with organizational structure, project team, communication management, project participants, etc. However, the fundamental basis for developing project management concept within a given enterprise starts with defining its level of organizational maturity. The present paper describes various models of organizational maturity (staged, continuous, petal-shaped and their common types (H. Кеrzner Organizational Maturity Model, Berkeley PM Maturity Model, Organizational Project Management Maturity Model, Portfolio, Program & Project Management Maturity Model. The analysis of available theoretic works showed that the notion “organizational project maturity” refers to the capability of an enterprise to select projects and manage them with the intention of achieving its strategic goals in the most effective way. Importantly, the level of maturity can be improved by means of formalizing the acquired knowledge, regulating project-related activities

Mineralization of nitrogen from nitrogen-15 labeled crop residues and utilization by rice

International Nuclear Information System (INIS)

Norman, R.J.; Gilmour, J.T.; Wells, B.R.

1990-01-01

The availability of N from the residues of the previous crop to the subsequent rice (Oryza sativa L.) crop is largely unknown. The objectives of this study were to (1) measure the mineralization of N from 15 N-labeled rice, soybean (Glycine max L.), and wheat (Triticum aestivum L.) residues and the uptake by a subsequent rice crop; and (2) compare the 15 N tracer method with the standard fertilizer-N response method used in field studies to quantify the N contribution from the crop residue to the next crop. Nitrogen mineralization from decomposing crop residues was measured by soil sampling prior to seeding the rice crop and after seeding by plant sampling the rice at maturity. The minimum estimate of the amount of residue N mineralized from the time of residue incorporation until rice harvest was 9, 52, and 38% of the rice, soybean, and wheat residue N, respectively. The amount of residue N recovered in the rice crop was 3, 11, and 37% of the rice, soybean, and wheat residue N, respectively. The lower the C/N ratio and the higher the amount of N in the residue, the lower was the amount of residue N recovered in the soil organic fraction at harvest and the higher was the amount of residue N mineralized. The 15 N tracer method compared favorably with the fertilizer N response method when the uptake efficiency of the fertilizer N was taken into account

An FSPM approach for modeling fruit yield and quality in mango trees

OpenAIRE

Boudon , Frédéric; Persello , Severine; Jestin , Alexandra; Briand , Anne-Sarah; Fernique , Pierre; Guédon , Yann; Léchaudel , Mathieu; Grechi , Isabelle; Normand , Frédéric

2016-01-01

International audience; Research focus-Mango (Mangifera indica L.), the fifth most cultivated fruit in the world, is mainly produced in tropical and subtropical regions. Its cultivation raises a number of issues: (i) mango yield is irregular across years, (ii) phenological asynchronisms within and between trees maintain long periods with phenological stages susceptible to pests and diseases, and (iii) fruit quality and maturity are heterogeneous at harvest. To address these issues, we develop...

Disentangling the Effects of Water Stress on Carbon Acquisition, Vegetative Growth, and Fruit Quality of Peach Trees by Means of the QualiTree Model

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Mitra Rahmati

2018-01-01

Full Text Available Climate change projections predict warmer and drier conditions. In general, moderate to severe water stress reduce plant vegetative growth and leaf photosynthesis. However, vegetative and reproductive growths show different sensitivities to water deficit. In fruit trees, water restrictions may have serious implications not only on tree growth and yield, but also on fruit quality, which might be improved. Therefore, it is of paramount importance to understand the complex interrelations among the physiological processes involved in within-tree carbon acquisition and allocation, water uptake and transpiration, organ growth, and fruit composition when affected by water stress. This can be studied using process-based models of plant functioning, which allow assessing the sensitivity of various physiological processes to water deficit and their relative impact on vegetative growth and fruit quality. In the current study, an existing fruit-tree model (QualiTree was adapted for describing the water stress effects on peach (Prunus persica L. Batsch vegetative growth, fruit size and composition. First, an energy balance calculation at the fruit-bearing shoot level and a water transfer formalization within the plant were integrated into the model. Next, a reduction function of vegetative growth according to tree water status was added to QualiTree. Then, the model was parameterized and calibrated for a late-maturing peach cultivar (“Elberta” under semi-arid conditions, and for three different irrigation practices. Simulated vegetative and fruit growth variability over time was consistent with observed data. Sugar concentrations in fruit flesh were well simulated. Finally, QualiTree allowed for determining the relative importance of photosynthesis and vegetative growth reduction on carbon acquisition, plant growth and fruit quality under water constrains. According to simulations, water deficit impacted vegetative growth first through a direct effect on

Disentangling the Effects of Water Stress on Carbon Acquisition, Vegetative Growth, and Fruit Quality of Peach Trees by Means of the QualiTree Model.

Science.gov (United States)

Rahmati, Mitra; Mirás-Avalos, José M; Valsesia, Pierre; Lescourret, Françoise; Génard, Michel; Davarynejad, Gholam H; Bannayan, Mohammad; Azizi, Majid; Vercambre, Gilles

2018-01-01

Climate change projections predict warmer and drier conditions. In general, moderate to severe water stress reduce plant vegetative growth and leaf photosynthesis. However, vegetative and reproductive growths show different sensitivities to water deficit. In fruit trees, water restrictions may have serious implications not only on tree growth and yield, but also on fruit quality, which might be improved. Therefore, it is of paramount importance to understand the complex interrelations among the physiological processes involved in within-tree carbon acquisition and allocation, water uptake and transpiration, organ growth, and fruit composition when affected by water stress. This can be studied using process-based models of plant functioning, which allow assessing the sensitivity of various physiological processes to water deficit and their relative impact on vegetative growth and fruit quality. In the current study, an existing fruit-tree model (QualiTree) was adapted for describing the water stress effects on peach ( Prunus persica L. Batsch) vegetative growth, fruit size and composition. First, an energy balance calculation at the fruit-bearing shoot level and a water transfer formalization within the plant were integrated into the model. Next, a reduction function of vegetative growth according to tree water status was added to QualiTree. Then, the model was parameterized and calibrated for a late-maturing peach cultivar ("Elberta") under semi-arid conditions, and for three different irrigation practices. Simulated vegetative and fruit growth variability over time was consistent with observed data. Sugar concentrations in fruit flesh were well simulated. Finally, QualiTree allowed for determining the relative importance of photosynthesis and vegetative growth reduction on carbon acquisition, plant growth and fruit quality under water constrains. According to simulations, water deficit impacted vegetative growth first through a direct effect on its sink strength

Stem water storage in five coexisting temperate broad-leaved tree species: significance, temporal dynamics and dependence on tree functional traits.

Science.gov (United States)

Köcher, Paul; Horna, Viviana; Leuschner, Christoph

2013-08-01

The functional role of internal water storage is increasingly well understood in tropical trees and conifers, while temperate broad-leaved trees have only rarely been studied. We examined the magnitude and dynamics of the use of stem water reserves for transpiration in five coexisting temperate broad-leaved trees with largely different morphology and physiology (genera Fagus, Fraxinus, Tilia, Carpinus and Acer). We expected that differences in water storage patterns would mostly reflect species differences in wood anatomy (ring vs. diffuse-porous) and wood density. Sap flux density was recorded synchronously at five positions along the root-to-branch flow path of mature trees (roots, three stem positions and branches) with high temporal resolution (2 min) and related to stem radius changes recorded with electronic point dendrometers. The daily amount of stored stem water withdrawn for transpiration was estimated by comparing the integrated flow at stem base and stem top. The temporal coincidence of flows at different positions and apparent time lags were examined by cross-correlation analysis. Our results confirm that internal water stores play an important role in the four diffuse-porous species with estimated 5-12 kg day(-1) being withdrawn on average in 25-28 m tall trees representing 10-22% of daily transpiration; in contrast, only 0.5-2.0 kg day(-1) was withdrawn in ring-porous Fraxinus. Wood density had a large influence on storage; sapwood area (diffuse- vs. ring-porous) may be another influential factor but its effect was not significant. Across the five species, the length of the time lag in flow at stem top and stem base was positively related to the size of stem storage. The stem stores were mostly exhausted when the soil matrix potential dropped below -0.1 MPa and daily mean vapor pressure deficit exceeded 3-5 hPa. We conclude that stem storage is an important factor improving the water balance of diffuse-porous temperate broad-leaved trees in moist

Optimizing biomass feedstock logistics for forest residue processing and transportation on a tree-shaped road network

Science.gov (United States)

Hee Han; Woodam Chung; Lucas Wells; Nathaniel Anderson

2018-01-01

An important task in forest residue recovery operations is to select the most cost-efficient feedstock logistics system for a given distribution of residue piles, road access, and available machinery. Notable considerations include inaccessibility of treatment units to large chip vans and frequent, long-distance mobilization of forestry equipment required to process...

Callus formation impedes adventitious rhizogenesis in air layers of broadleaved tree species

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Sanjay Singh

2014-07-01

Full Text Available Callusing and root induction in air layering was evaluated aiming at evolution of procedure for mass clonal propagation of mature ortets of five tropical broadleaf species differing in their potential for adventitious root formation in shoot cuttings as: Anogiessus latifolia < Boswellia serrata < Dalbergia latifolia < Gmelina arborea < Dalbergia sissoo. Two experiments were conducted in rainy season during consecutive years; without application of growth regulators in the first year and with growth regulators (T1 - water, T2- 100 ppm indole-3-acetic acid, T3-100 ppm thiamine-HCl and T4 -combination of T2 + T3 in the next year. Air layered branches were detached from the trees to record percentage of alive airlayers, callusing and rooting (% as well as root number and root length. Response to air layering was found to be highly variable in five tree species but appeared to be feasible procedure for clonal propagation of mature ortets of B. serrata and D. sissoo with 100% (in auxin + thiamine treatment and 83.3% (in auxin treatment success, respectively. Maximum callusing (% was found in D. latifolia while no callusing was observed in D. sissoo, which is most easy-to-root among all five species. Callus formation impedes adventitious rhizogenesis in air layers as significant negative correlation of callusing (% and adventitious root formation was recorded in air layers of five tropical broadleaved tree species. Application of exogenous auxin alone or in combination with thiamine circumvents callusing to ensure direct development of roots for successful air layering.

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2013-01-01

We introduce a new compression scheme for labeled trees based on top trees [3]. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2015-01-01

We introduce a new compression scheme for labeled trees based on top trees. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

THE “TREE OF LIFE” SYMBOL IN JEWELLERY

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TEODOR-STANCIU Silviu

2017-05-01

Full Text Available History and tradition play a very important role in the development of a society. Designed objects were and are adorned with signs and symbols holding various messages and aesthetic particularities. These objects have the ability of spreading emotions through their shape, material, finishing or graphic and are made using different materials, techniques and technologies. By particularising a sign one must take into account its orientation towards certain objects regarding the significance, the culture and the historical period. The sacred geometry, a sum of shapes with religious and cultural values, can be analysed from a scientific, philosophical, aesthetic and mystic point of view. The origin, the nature and the relationship between these shapes are considered to be determined by the surrounding universe. The symbol is an intermediary which favours the communication from the visible reality to the invisible, non-figurative one. One of the shapes with a symbol value, frequently used, is the tree of life. The tree of life is a symbol dating from the Neolithic, but still applied nowadays. Bearing information and witness of the history of a civilisation, the “Tree of life” symbol inspired the artisans and artists from different cultures, being graphically readapted, both due to the technology development, as well as to the society’s maturation. The present paper presents the evolution of the “tree of life” sign, the manner in which it followed the history and civilisation flow, the diversity of objects adorned with it through various working techniques, as well as its evolution through new interpretations in the jewellery design applications. The paper presents the experiment of making a silver pendant with the “Tree of life” symbol, reinterpreted and made using a 3D program.

A Demographic Approach to Evaluating Tree Population Sustainability

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Corey R. Halpin

2017-02-01

Full Text Available Quantitative criteria for assessing demographic sustainability of tree populations would be useful in forest conservation, as climate change and a growing complex of invasive pests are likely to drive forests outside their historic range of variability. In this paper, we used CANOPY, a spatially explicit, individual‐tree model, to examine the effects of initial size distributions on sustainability of tree populations for 70 northern hardwood stands under current environmental conditions. A demographic sustainability index was calculated as the ratio of future simulated basal area to current basal area, given current demographic structure and density‐dependent demographic equations. Only steeply descending size distributions were indicated to be moderately or highly sustainable (final basal area/initial basal area ≥0.7 over several tree generations. Five of the six principal species had demographic sustainability index values of <0.6 in 40%–84% of the stands. However, at a small landscape scale, nearly all species had mean index values >1. Simulation experiments suggested that a minimum sapling density of 300 per hectare was required to sustain the initial basal area, but further increases in sapling density did not increase basal area because of coincident increases in mortality. A variable slope with high q‐ratios in small size classes was needed to maintain the existing overstory of mature and old‐growth stands. This analytical approach may be useful in identifying stands needing restoration treatments to maintain existing species composition in situations where forests are likely to have future recruitment limitations.

Sequence Tree Modeling for Combined Accident and Feed-and-Bleed Operation

International Nuclear Information System (INIS)

Kim, Bo Gyung; Kang Hyun Gook; Yoon, Ho Joon

2016-01-01

In order to address this issue, this study suggests the sequence tree model to analyze accident sequence systematically. Using the sequence tree model, all possible scenarios which need a specific safety action to prevent the core damage can be identified and success conditions of safety action under complicated situation such as combined accident will be also identified. Sequence tree is branch model to divide plant condition considering the plant dynamics. Since sequence tree model can reflect the plant dynamics, arising from interaction of different accident timing and plant condition and from the interaction between the operator action, mitigation system, and the indicators for operation, sequence tree model can be used to develop the dynamic event tree model easily. Target safety action for this study is a feed-and-bleed (F and B) operation. A F and B operation directly cools down the reactor cooling system (RCS) using the primary cooling system when residual heat removal by the secondary cooling system is not available. In this study, a TLOFW accident and a TLOFW accident with LOCA were the target accidents. Based on the conventional PSA model and indicators, the sequence tree model for a TLOFW accident was developed. If sampling analysis is performed, practical accident sequences can be identified based on the sequence analysis. If a realistic distribution for the variables can be obtained for sampling analysis, much more realistic accident sequences can be described. Moreover, if the initiating event frequency under a combined accident can be quantified, the sequence tree model can translate into a dynamic event tree model based on the sampling analysis results

Sequence Tree Modeling for Combined Accident and Feed-and-Bleed Operation

Energy Technology Data Exchange (ETDEWEB)

Kim, Bo Gyung; Kang Hyun Gook [KAIST, Daejeon (Korea, Republic of); Yoon, Ho Joon [Khalifa University of Science, Abu Dhabi (United Arab Emirates)

2016-05-15

In order to address this issue, this study suggests the sequence tree model to analyze accident sequence systematically. Using the sequence tree model, all possible scenarios which need a specific safety action to prevent the core damage can be identified and success conditions of safety action under complicated situation such as combined accident will be also identified. Sequence tree is branch model to divide plant condition considering the plant dynamics. Since sequence tree model can reflect the plant dynamics, arising from interaction of different accident timing and plant condition and from the interaction between the operator action, mitigation system, and the indicators for operation, sequence tree model can be used to develop the dynamic event tree model easily. Target safety action for this study is a feed-and-bleed (F and B) operation. A F and B operation directly cools down the reactor cooling system (RCS) using the primary cooling system when residual heat removal by the secondary cooling system is not available. In this study, a TLOFW accident and a TLOFW accident with LOCA were the target accidents. Based on the conventional PSA model and indicators, the sequence tree model for a TLOFW accident was developed. If sampling analysis is performed, practical accident sequences can be identified based on the sequence analysis. If a realistic distribution for the variables can be obtained for sampling analysis, much more realistic accident sequences can be described. Moreover, if the initiating event frequency under a combined accident can be quantified, the sequence tree model can translate into a dynamic event tree model based on the sampling analysis results.

Assessing healthcare process maturity: challenges of using a business process maturity model

NARCIS (Netherlands)

Tarhan, A.; Turetken, O.; van den Biggelaar, F.J.H.M.

2015-01-01

Doi: 10.4108/icst.pervasivehealth.2015.259105 The quality of healthcare services is influenced by the maturity of healthcare processes used to develop it. A maturity model is an instrument to assess and continually improve organizational processes. In the last decade, a number of maturity models

Diagnostic assessment of skeletal maturity through dental maturation in Hispanic growing individuals

Directory of Open Access Journals (Sweden)

Alejandra Cisternas

2017-01-01

Full Text Available Background: The aim of this study was to explore dental maturation as a diagnostic test for skeletal maturation. Materials and Methods: Six hundred and fifty-seven growing individuals were classified according to their cervical vertebral maturity and dental maturity, both determined in lateral cephalograms and panoramic radiographs, respectively. The correlation between cervical and dental stages was established for each gender. A receiver operating characteristic curve analysis was made, and sensitivity and specificity values were established. Results: Correlation was found between cervical and dental maturation for females (r = 0.73; P<0.001 and males (r = 0.60; P<0.001. Sensitivity for dental Stage F, as an indicator of a postmaturation peak stage, was 87.21% for females and 97.1% for males, whereas specificity for the same stage was 82.92% and 72.3% for females and males, respectively. Conclusions: Dental maturation evaluation could contribute determining whether a patient is in a pre- or post-growth spurt stage.

Correlation between Dental Maturity by Demirjian Method and Skeletal Maturity by Cervical Vertebral Maturity Method using Panoramic Radiograph and Lateral Cephalogram

Directory of Open Access Journals (Sweden)

Madhusudhanan Mallika Mini

2017-01-01

Full Text Available Introduction: Radiographs are effective tools in assessing the stages of bone maturation in dentistry. The cervical vertebral maturation method is a proven effective tool in assessing the adolescent growth spurt than hand-wrist radiographs in an individual. Assessment of dental calcification stages are a reliable method for determining dental maturity. Panoramic imaging can be used as the primary imaging modality for assessing maturity if a correlation can be found out between tooth calcification stages and cervical vertebral maturation stages. This study was conducted to determine the correlation between dental maturity stage and cervical vertebral maturity stage and to estimate predictor variables for cervical vertebral maturation stages (CVMS stratified by gender in a tertiary hospital setting. Materials and Methods: A descriptive study was conducted among patients accessing orthodontic care in radiology outpatient clinic, Oral Medicine and Radiology department, Government Dental College Thiruvananthapuram for a period of 15 months. Participants were selected between the ages of 8 and 16 years. Panoramic radiographs and lateral cephalograms were used to determine dental maturity stages using Demirjian method and CVMS using Bacetti and Franchi method, respectively. Results: One hundred patients (males = 46, females = 54 were included in the study; the spearman rank order correlation revealed significant relationship. The correlation ranged from 0.61 to 0.74 for females and 0.48 to 0.51 for males. Second premolar showed highest correlation and canine the lowest for both females and males. Stage G of mandibular second premolar signifies the pubertal growth period in this study population. By ordinal regression model, G stage of second premolar was found to be a significant predictor in males and stage H followed by G and F in females for the age group of 12–14 years. Conclusion: Dental maturation stages were significantly correlated with CVMS

Generalising tree traversals and tree transformations to DAGs

DEFF Research Database (Denmark)

Bahr, Patrick; Axelsson, Emil

2017-01-01

We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead. The resul......We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead...... as the complementing theory with a number of examples....

PHENOLOGICAL CHARACTERISTICS OF GENOTYPES FROM CATTLEY GUAVA AND GUAVA TREES SUBMITTED TO FRUCTIFICATION PRUNING

Directory of Open Access Journals (Sweden)

CINTIA APARECIDA BREMENKAMP

Full Text Available ABSTRACT Psidium cattleianum Sabine is a species from the Myrtaceae family that serves as an option for the native fruits cultivation, besides being considered a source of resistance to the Meloidogyne enterolobii nematode. Although cattley guava trees from this species produce flower buds in young branches, there are no reports of response to fructification pruning or phenological synchronism with the guava tree. The objective of this paper was the comparative evaluation of the genotype response of strawberry guava trees and guava cultivars to fructification pruning, thus, describing the phenology of both species under the same cultivation conditions. The experiment was conducted under an entirely randomized outline, in 7x2 factorial scheme, being evaluated seven genotypes (three from strawberry guava and four from guava trees, and with pruning performed in two seasons (May 2012 and March 2013, with three repetitions. Fructification pruning was executed by a lopping on all mature branches, from the last growth flow in the woody branch region. Were evaluated budding characteristics and fruit harvesting, as well as number of days from pruning to the observation of the phenological event. Cattley guava tree pruning stimulated fructification of all three genotypes after pruning done on May and two genotypes after the March’s pruning. There has been a sync between the guava cultivars’ flowering and both strawberry guava trees genotypes, when those were pruned on May.

Surface tree languages and parallel derivation trees

NARCIS (Netherlands)

Engelfriet, Joost

1976-01-01

The surface tree languages obtained by top-down finite state transformation of monadic trees are exactly the frontier-preserving homomorphic images of sets of derivation trees of ETOL systems. The corresponding class of tree transformation languages is therefore equal to the class of ETOL languages.

Unavailability of the residual system heat removal of Angra 1 by Bayesian networks considering dependent failures

International Nuclear Information System (INIS)

Gomes, Many R.S.; Melo, Paulo F.F.F. e

2015-01-01

This work models by Bayesian networks the residual heat removal system (SRCR) of Angra I nuclear power plant, using fault tree mapping for systematically identifying all possible modes of occurrence caused by a large loss of coolant accident (large LOCA). The focus is on dependent events, such as the bridge system structure of the residual heat removal system and the occurrence of common-cause failures. We used the Netica™ tool kit, Norsys Software Corporation and Python 2.7.5 for modeling Bayesian networks and Microsoft Excel for modeling fault trees. Working with dependent events using Bayesian networks is similar to the solutions proposed by other models, beyond simple understanding and ease of application and modification throughout the analysis. The results obtained for the unavailability of the system were satisfactory, showing that in most cases the system will be available to mitigate the effects of an accident as described above. (author)

Unavailability of the residual system heat removal of Angra 1 by Bayesian networks considering dependent failures

Energy Technology Data Exchange (ETDEWEB)

Gomes, Many R.S.; Melo, Paulo F.F.F. e, E-mail: mgomes@con.ufrj.br, E-mail: frutuoso@nuclear.ufrj.br [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil). Programa de Pos-Graduacao em Engenharia Nuclear

2015-07-01

This work models by Bayesian networks the residual heat removal system (SRCR) of Angra I nuclear power plant, using fault tree mapping for systematically identifying all possible modes of occurrence caused by a large loss of coolant accident (large LOCA). The focus is on dependent events, such as the bridge system structure of the residual heat removal system and the occurrence of common-cause failures. We used the Netica™ tool kit, Norsys Software Corporation and Python 2.7.5 for modeling Bayesian networks and Microsoft Excel for modeling fault trees. Working with dependent events using Bayesian networks is similar to the solutions proposed by other models, beyond simple understanding and ease of application and modification throughout the analysis. The results obtained for the unavailability of the system were satisfactory, showing that in most cases the system will be available to mitigate the effects of an accident as described above. (author)

Log bioassay of residual effectiveness of insecticides against bark beetles

Science.gov (United States)

Richard H. Smith

1982-01-01

Residual effectiveness of nine insecticides applied to bark was tested against western, mountain, and Jeffrey pine beetles. Ponderosa and Jeffrey pine trees were treated and logs cut from them 2 to 13 months later, and bioassayed with the three beetles. The insecticides were sprayed at the rate of 1 gal (3.8 l) per 40- or 80-ft² (3.6 or 7.2 m²) bark surface at varying...

Automatic Assessment of Pathological Voice Quality Using Higher-Order Statistics in the LPC Residual Domain

Directory of Open Access Journals (Sweden)

JiYeoun Lee

2009-01-01

Full Text Available A preprocessing scheme based on linear prediction coefficient (LPC residual is applied to higher-order statistics (HOSs for automatic assessment of an overall pathological voice quality. The normalized skewness and kurtosis are estimated from the LPC residual and show statistically meaningful distributions to characterize the pathological voice quality. 83 voice samples of the sustained vowel /a/ phonation are used in this study and are independently assessed by a speech and language therapist (SALT according to the grade of the severity of dysphonia of GRBAS scale. These are used to train and test classification and regression tree (CART. The best result is obtained using an optima l decision tree implemented by a combination of the normalized skewness and kurtosis, with an accuracy of 92.9%. It is concluded that the method can be used as an assessment tool, providing a valuable aid to the SALT during clinical evaluation of an overall pathological voice quality.

The potential of fruit trees to enhance converted habitats for migrating birds in southern Mexico

Science.gov (United States)

Foster, M.S.

2007-01-01

Migration routes used by Nearctic migrant birds can cover great distances; they also differ among species, within species, and between years and seasons. As a result, migration routes for an entire migratory avifauna can encompass broad geographic areas, making it impossible to protect continuous stretches of habitat sufficient to connect the wintering and breeding grounds for most species. Consequently, ways to enhance habitats converted for human use (i.e. for pasture, crop cultivation, human settlement) as stopover sites for migrants are especially important. Shelterbelts around pastures and fields, if planted with species targeted to support migrant (and resident) bird species that naturally occupy mature forest habitats and that are at least partially frugivorous, could be a powerful enhancement tool for such species, if the birds will enter the converted areas to feed. I tested this approach for Nearctic migrant birds during the spring migration through an area in Chiapas, Mexico. Mature forest tree species whose fruits are eaten by birds were surveyed. Based on life form, crop size and fruit characteristics, I selected three tree species for study: Cymbopetalum mayanum (Annonaceae), Bursera simaruba (Burseraceae) and Trophis racemosa (Moraceae). I compared the use of fruits of these species by migrants and residents in forest with their use of the fruits of isolated individuals of the same species in pasture and cropland. All three plant species were useful for enhancing converted habitats for forest-occupying spring migrants, although species differed in the degree to which they entered disturbed areas to feed on the fruits. These tree species could probably enhance habitats for migrants at sites throughout the natural geographic ranges of the plants; in other geographic areas for other target bird groups, other tree species might be more appropriate.

TreePics: visualizing trees with pictures

Directory of Open Access Journals (Sweden)

Nicolas Puillandre

2017-09-01

Full Text Available While many programs are available to edit phylogenetic trees, associating pictures with branch tips in an efficient and automatic way is not an available option. Here, we present TreePics, a standalone software that uses a web browser to visualize phylogenetic trees in Newick format and that associates pictures (typically, pictures of the voucher specimens to the tip of each branch. Pictures are visualized as thumbnails and can be enlarged by a mouse rollover. Further, several pictures can be selected and displayed in a separate window for visual comparison. TreePics works either online or in a full standalone version, where it can display trees with several thousands of pictures (depending on the memory available. We argue that TreePics can be particularly useful in a preliminary stage of research, such as to quickly detect conflicts between a DNA-based phylogenetic tree and morphological variation, that may be due to contamination that needs to be removed prior to final analyses, or the presence of species complexes.

Skeletal maturation, fundamental motor skills and motor coordination in children 7-10 years.

Science.gov (United States)

Freitas, Duarte L; Lausen, Berthold; Maia, José António; Lefevre, Johan; Gouveia, Élvio Rúbio; Thomis, Martine; Antunes, António Manuel; Claessens, Albrecht L; Beunen, Gaston; Malina, Robert M

2015-01-01

Relationships between skeletal maturation and fundamental motor skills and gross motor coordination were evaluated in 429 children (213 boys and 216 girls) 7-10 years. Skeletal age was assessed (Tanner-Whitehouse 2 method), and stature, body mass, motor coordination (Körperkoordinations Test für Kinder, KTK) and fundamental motor skills (Test of Gross Motor Development, TGMD-2) were measured. Relationships among chronological age, skeletal age (expressed as the standardised residual of skeletal age on chronological age) and body size and fundamental motor skills and motor coordination were analysed with hierarchical multiple regression. Standardised residual of skeletal age on chronological age interacting with stature and body mass explained a maximum of 7.0% of the variance in fundamental motor skills and motor coordination over that attributed to body size per se. Standardised residual of skeletal age on chronological age alone accounted for a maximum of 9.0% of variance in fundamental motor skills, and motor coordination over that attributed to body size per se and interactions between standardised residual of skeletal age on chronological age and body size. In conclusion, skeletal age alone or interacting with body size has a negligible influence on fundamental motor skills and motor coordination in children 7-10 years.

Mature forms of the major seed storage albumins in sunflower: A mass spectrometric approach.

Science.gov (United States)

Franke, Bastian; Colgrave, Michelle L; Mylne, Joshua S; Rosengren, K Johan

2016-09-16

Seed storage albumins are abundant, water-soluble proteins that are degraded to provide critical nutrients for the germinating seedling. It has been established that the sunflower albumins encoded by SEED STORAGE ALBUMIN 2 (SESA2), SESA20 and SESA3 are the major components of the albumin-rich fraction of the common sunflower Helianthus annuus. To determine the structure of sunflowers most important albumins we performed a detailed chromatographic and mass spectrometric characterization to assess what post-translational processing they receive prior to deposition in the protein storage vacuole. We found that SESA2 and SESA20 each encode two albumins. The first of the two SESA2 albumins (SESA2-1) exists as a monomer of 116 or 117 residues, differing by a threonine at the C-terminus. The second of the two SESA2 albumins (SESA2-2) is a monomer of 128 residues. SESA20 encodes the albumin SESA20-2, which is a 127-residue monomer, whereas SESA20-1 was not abundant enough to be structurally described. SESA3, which has been partly characterized previously, was found in several forms with methylation of its asparagine residues. In contrast to other dicot albumins, which are generally matured into a heterodimer, all the dominant mature sunflower albumins SESA2, SESA20-2, SESA3 and its post-translationally modified analogue SESA3-a are monomeric. Sunflower plants have been bred to thrive in various climate zones making them favored crops to meet the growing worldwide demand by humans for protein. The abundance of seed storage proteins makes them an important source of protein for animal and human nutrition. This study explores the structures of the dominant sunflower napin-type seed storage albumins to understand what structures evolution has favored in the most abundant proteins in sunflower seed. Crown Copyright © 2016. Published by Elsevier B.V. All rights reserved.

Carbon sequestration and water flow regulation services in mature Mediterranean Forest

Science.gov (United States)

Beguería, S.; Ovando, P.

2015-12-01

We develop a forestland use and management model that integrates spatially-explicit biophysical and economic data, to estimate the expected pattern of climate regulation services through carbon dioxide (CO2) sequestration in tree and shrubs biomass, and water flow regulation. We apply this model to examine the potential trade-offs and synergies in the supply of CO2 sequestration and water flow services in mature Mediterranean forest, considering two alternative forest management settings. A forest restoration scenario through investments in facilitating forest regeneration, and a forestry activity abandonment scenario as result of unprofitable forest regeneration investment. The analysis is performed for different discount rates and price settings for carbon and water. The model is applied at the farm level in a group of 567 private silvopastoral farms across Andalusia (Spain), considering the main forest species in this region: Quercus ilex, Q. suber, Pinus pinea, P. halepensis, P. pinaster and Eucalyptus sp., as well as for tree-less shrubland and pastures. The results of this research are provided by forest land unit, vegetation, farm and for the group of municipalities where the farms are located. Our results draw attention to the spatial variability of CO2 and water flow regulation services, and point towards a trade-off between those services. The pattern of economic benefits associated to water and carbon services fluctuates according to the assumptions regarding price levels and discounting rates, as well as in connection to the expected forest management and tree growth models, and to spatially-explicit forest attributes such as existing tree and shrubs inventories, the quality of the sites for growing different tree species, soil structure or the climatic characteristics. The assumptions made regarding the inter-temporal preferences and relative prices have a large effect on the estimated economic value of carbon and water services. These results

Health assessment of tree swallows (Tachycineta bicolor) on the oil sands using stress, immune function and growth indicators

Energy Technology Data Exchange (ETDEWEB)

Harms, N.J.; Smits, J.E. [Saskatchewan Univ., Saskatoon, SK (Canada)

2009-07-01

Oil sand mining companies in Alberta continue to explore reclamation strategies for tailings water and are evaluating the ecological effectiveness of constructed wetlands for the bioremediation of liquid and solid tailings contaminated with naphthenic acids, polycyclic aromatic hydrocarbons, and dissolved inorganic ions. The success of reclaimed sites and ecosystem health can be measured by examining health variables in wild tree swallows (Tachycineta bicolor) nesting on experimental wetlands receiving tailings or water from tailings ponds. This presentation reported on a study that measured clutch size, egg mass, and hatching and fledging success of 40 breeding pairs of tree swallows on 3 experimental wetlands on Suncor Energy Inc. and Syncrude Canada Ltd. oil sands leases. The Shallow Wetlands/Demonstration Pond (Syncrude), Consolidated Tailings and Natural Wetlands (Suncor) represent sites of different ages and different categories of wetland reclamation, notably mature, maturing, and newly reclaimed. Due to lack of nesting success on the selected reference site, the Shallow Wetlands/Demonstration Pond was selected as the reference site because it has undergone nearly complete bioremediation and had a very low level of contamination. Nestling growth and survival were measured in 199 tree swallows nestlings on the 3 experimental wetlands. Two mid-weight nestlings from 12 nest boxes on each study site were also examined for feather corticosterone levels and adaptive immune function.

Comparative evaluation of efficiency of serum IGF-1, hand-wrist radiographs, and cervical vertebrae as skeletal maturity indicator

Directory of Open Access Journals (Sweden)

Ritu Phogat

2015-01-01

Full Text Available Introduction: Accurate determination of skeletal maturity and remaining growth is crucial to identify optimal timing for the treatment of a series of dentoskeletal disharmonies in all three planes of space. Currently, cervical vertebral stages and hand-wrist radiographs are used to identify peak mandibular bone growth. Objectives: The main objective of this study was to compare and correlate insulin-like growth factor 1 (IGF-1 levels to skeletal maturation stages obtained by the cervical vertebral maturation method and skeletal maturational indicators obtained by the hand-wrist maturation method. Materials and Methods: In this cross-sectional study, serum IGF-1 level was measured for 53 healthy, North Indian subjects (26 female, 27 male, who were either about to begin orthodontic treatment, were undergoing treatment, or were in posttreatment follow-up between the ages of 9 and 20 years. For each subject, hand-wrist radiographs and lateral cephalograms were also obtained and staged. Results: The mean serum IGF-1 levels were the highest at the skeletal stages that were previously associated with the greatest amount of mandibular growth. Serum IGF-1 levels were low in the prepubertal skeletal stages, rise sharply to their peak in late puberty, and decline to approach prepubertal levels after puberty. Conclusion: Serum IGF-1 could be used as a skeletal maturity indicator and might be useful in detecting residual mandibular growth in young adults.

ColorTree: a batch customization tool for phylogenic trees.

Science.gov (United States)

Chen, Wei-Hua; Lercher, Martin J

2009-07-31

Genome sequencing projects and comparative genomics studies typically aim to trace the evolutionary history of large gene sets, often requiring human inspection of hundreds of phylogenetic trees. If trees are checked for compatibility with an explicit null hypothesis (e.g., the monophyly of certain groups), this daunting task is greatly facilitated by an appropriate coloring scheme. In this note, we introduce ColorTree, a simple yet powerful batch customization tool for phylogenic trees. Based on pattern matching rules, ColorTree applies a set of customizations to an input tree file, e.g., coloring labels or branches. The customized trees are saved to an output file, which can then be viewed and further edited by Dendroscope (a freely available tree viewer). ColorTree runs on any Perl installation as a stand-alone command line tool, and its application can thus be easily automated. This way, hundreds of phylogenic trees can be customized for easy visual inspection in a matter of minutes. ColorTree allows efficient and flexible visual customization of large tree sets through the application of a user-supplied configuration file to multiple tree files.

Assesing tree-root & soil interaction using pull-out test apparatus

Science.gov (United States)

Wibowo, J.; Corcoran, M. K.; Kala, R.; Leavell, D.

2011-12-01

. When the test begins the load cell and displacement transducers immediately started recording the measurements, and the measurements are stored on a laptop computer. The hydraulic pump controls the rate of loading for a relatively slow pulling displacement rate of 0.08 in./sec. Failure occurred when the root breaks or was pulled out of the soil. Maximum forces and root failure location were noted, as well as any additional observations during and after the test. In the ERDC tests, root diameters (root with bark) ranged between 0.7 and 2.33 in., the pullout force was between 86 and 3513 lb, and the pullout stress was between 56 and 2645 psi. ERDC recorded three different types of tree-root failures: pure root tensile failure, bonding between root and soil failure, and a combination of the two. In tensile failure, a root breaks abruptly and the force versus displacement curve usually shows a steep slope, and there is no residual strength. In a bonding failure, the force versus displacement curve shows a gentler slope, and there is residual strength. A combined failure mode may also occur. For pullout tests conducted for the ERDC research, the combined mode failure was the most prevalent failure mechanism.

Biology and host associations of redbay ambrosia beetle (Coleoptera: Curculionidae: Scolytinae), exotic vector of laurel wilt killing redbay trees in the southeastern United States.

Science.gov (United States)

Hanula, James L; Mayfield, Albert E; Fraedrich, Stephen W; Rabaglia, Robert J

2008-08-01

The redbay ambrosia beetle, Xyleborus glabratus Eichhoff (Coleoptera: Curculionidae: Scolytinae), and its fungal symbiont, Raffaelea sp., are new introductions to the southeastern United States responsible for the wilt of mature redbay, Persea borbonia (L.) Spreng., trees. In 2006 and 2007, we investigated the seasonal flight activity of X. glabratus, its host associations, and population levels at eight locations in South Carolina and Georgia where infestations ranged from very recent to at least several years old. Adults were active throughout the year with peak activity in early September. Brood development seems to take 50-60 d. Wood infested with beetles and infected with the Raffaelea sp. was similar in attraction to uninfested redbay wood, whereas both were more attractive than a nonhost species. Sassafras, Sassafras albidium (Nutt.) Nees, another species of Lauraceae, was not attractive to X. glabratus and very few beetle entrance holes were found in sassafras wood compared with redbay. Conversely, avocado, Persea americana Mill., was as attractive to X. glabratus as swampbay, P. palustris (Raf.) Sarg., and both were more attractive than the nonhost red maple, Acer rubrum L. However, avocado had relatively few entrance holes in the wood. In 2007, we compared X. glabratus populations in areas where all mature redbay have died to areas where infestations were very active and more recent. Trap catches of X. glabratus and numbers of entrance holes in trap bolts of redbay were correlated with the number of dead trees with leaves attached. Older infestations where mature host trees had been eliminated by the wilt had low numbers of beetles resulting in trap catches ranging from 0.04 to 0.12 beetles per trap per d compared with 4-7 beetles per trap per d in areas with numerous recently dead trees. Our results indicate beetle populations drop dramatically after suitable host material is gone and provide hope that management strategies can be developed to restore

Stem compression reversibly reduces phloem transport in Pinus sylvestris trees.

Science.gov (United States)

Henriksson, Nils; Tarvainen, Lasse; Lim, Hyungwoo; Tor-Ngern, Pantana; Palmroth, Sari; Oren, Ram; Marshall, John; Näsholm, Torgny

2015-10-01

Manipulating tree belowground carbon (C) transport enables investigation of the ecological and physiological roles of tree roots and their associated mycorrhizal fungi, as well as a range of other soil organisms and processes. Girdling remains the most reliable method for manipulating this flux and it has been used in numerous studies. However, girdling is destructive and irreversible. Belowground C transport is mediated by phloem tissue, pressurized through the high osmotic potential resulting from its high content of soluble sugars. We speculated that phloem transport may be reversibly blocked through the application of an external pressure on tree stems. Thus, we here introduce a technique based on compression of the phloem, which interrupts belowground flow of assimilates, but allows trees to recover when the external pressure is removed. Metal clamps were wrapped around the stems and tightened to achieve a pressure theoretically sufficient to collapse the phloem tissue, thereby aiming to block transport. The compression's performance was tested in two field experiments: a (13)C canopy labelling study conducted on small Scots pine (Pinus sylvestris L.) trees [2-3 m tall, 3-7 cm diameter at breast height (DBH)] and a larger study involving mature pines (∼15 m tall, 15-25 cm DBH) where stem respiration, phloem and root carbohydrate contents, and soil CO2 efflux were measured. The compression's effectiveness was demonstrated by the successful blockage of (13)C transport. Stem compression doubled stem respiration above treatment, reduced soil CO2 efflux by 34% and reduced phloem sucrose content by 50% compared with control trees. Stem respiration and soil CO2 efflux returned to normal within 3 weeks after pressure release, and (13)C labelling revealed recovery of phloem function the following year. Thus, we show that belowground phloem C transport can be reduced by compression, and we also demonstrate that trees recover after treatment, resuming C

Novel maturity parameters for mature to over-mature source rocks and oils based on the distribution of phenanthrene series compounds

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Zixiang Wang

2016-03-01

Two additional novel and an optimized maturation parameters based on the distribution of phenanthrene series compounds are proposed and their relationships to EasyRo% (x are established: log(MPs/P = 0.19x + 0.08 (0.9% < EasyRo% < 2.1%; log(MPs/P = 0.64x − 0.86 (2.1% < EasyRo% < 3.4%; log(DMPs/TMPs = 0.71x − 0.55 (0.9% < EasyRo% < 3.4%; log(MTR = 0.84x − 0.75 (0.9% < EasyRo% < 3.4%. These significant positive correlations are strong argument for using log(MPs/P, log(DMPs/TMPs and log(MTR as maturity parameters, especially for mature to over-mature source rocks.

Recent trends in the intrinsic water-use efficiency of ringless rainforest trees in Borneo.

Science.gov (United States)

Loader, N J; Walsh, R P D; Robertson, I; Bidin, K; Ong, R C; Reynolds, G; McCarroll, D; Gagen, M; Young, G H F

2011-11-27

Stable carbon isotope (δ(13)C) series were developed from analysis of sequential radial wood increments from AD 1850 to AD 2009 for four mature primary rainforest trees from the Danum and Imbak areas of Sabah, Malaysia. The aseasonal equatorial climate meant that conventional dendrochronology was not possible as the tree species investigated do not exhibit clear annual rings or dateable growth bands. Chronology was established using radiocarbon dating to model age-growth relationships and date the carbon isotopic series from which the intrinsic water-use efficiency (IWUE) was calculated. The two Eusideroxylon zwageri trees from Imbak yielded ages of their pith/central wood (±1 sigma) of 670 ± 40 and 759 ± 40 years old; the less dense Shorea johorensis and Shorea superba trees at Danum yielded ages of 240 ± 40 and 330 ± 40 years, respectively. All trees studied exhibit an increase in the IWUE since AD 1960. This reflects, in part, a response of the forest to increasing atmospheric carbon dioxide concentration. Unlike studies of some northern European trees, no clear plateau in this response was observed. A change in the IWUE implies an associated modification of the local carbon and/or hydrological cycles. To resolve these uncertainties, a shift in emphasis away from high-resolution studies towards long, well-replicated time series is proposed to develop the environmental data essential for model evaluation. Identification of old (greater than 700 years) ringless trees demonstrates their potential in assessing the impacts of climatic and atmospheric change. It also shows the scientific and applied value of a conservation policy that ensures the survival of primary forest containing particularly old trees (as in Imbak Canyon and Danum).

Canopy seed banks as time capsules of biodiversity in pasture-remnant tree crowns.

Science.gov (United States)

Nadkarni, Nalini M; Haber, Willam A

2009-10-01

Tropical pastures present multiple barriers to tree regeneration and restoration. Relict trees serve as "regeneration foci" because they ameliorate the soil microclimate and serve as safe spots for dispersers. Here, we describe another mechanism by which remnant trees may facilitate pasture regeneration: the presence of seed banks in the canopy soil that accumulates from decomposing epiphytes within the crowns of mature remnant trees in tropical cloud forest pastures. We compared seed banks of canopy soils (histosols derived from fallen leaves, fruits, flower, and twigs of host trees and epiphytes, dead bryophytes, bark, detritus, dead animals, and microorganisms, and dust that accumulate on trunks and the upper surfaces of large branches) in pastures, canopy soils in primary forest trees, and soil on the forest floor in Monteverde, Costa Rica. There were 5211 epiphytic and terrestrial plant seeds in the three habitats. All habitats were dominated by seeds in a relatively small number of plant families, most of which were primarily woody, animal pollinated, and animal dispersed. The density of seeds on the forest floor was greater than seed density in either pasture-canopy or forest-canopy soils; the latter two did not differ. Eight species in 44 families and 61 genera from all of the habitats were tallied. There were 37 species in the pasture-canopy soil, 33 in the forest-canopy soil, and 57 on the forest floor. Eleven species were common to all habitats. The mean species richness in the pasture canopy was significantly higher than the forest canopy (F =83.38; p banks of pasture trees can function as time capsules by providing propagules that are removed in both space and time from the primary forest. Their presence may enhance the ability of pastures to regenerate more quickly, reinforcing the importance of trees in agricultural settings.

Tree Colors: Color Schemes for Tree-Structured Data.

Science.gov (United States)

Tennekes, Martijn; de Jonge, Edwin

2014-12-01

We present a method to map tree structures to colors from the Hue-Chroma-Luminance color model, which is known for its well balanced perceptual properties. The Tree Colors method can be tuned with several parameters, whose effect on the resulting color schemes is discussed in detail. We provide a free and open source implementation with sensible parameter defaults. Categorical data are very common in statistical graphics, and often these categories form a classification tree. We evaluate applying Tree Colors to tree structured data with a survey on a large group of users from a national statistical institute. Our user study suggests that Tree Colors are useful, not only for improving node-link diagrams, but also for unveiling tree structure in non-hierarchical visualizations.

LEAF RESIDUE DECOMPOSITION OF SELECTED ATLANTIC FOREST TREE SPECIES

Directory of Open Access Journals (Sweden)

Helga Dias Arato

2018-02-01

Full Text Available ABSTRACT Biogeochemical cycling is essential to establish and maintain plant and animal communities. Litter is one of main compartments of this cycle, and the kinetics of leaf decomposition in forest litter depend on the chemical composition and environmental conditions. This study evaluated the effect of leaf composition and environmental conditions on leaf decomposition of native Atlantic Forest trees. The following species were analyzed: Mabea fistulifera Mart., Bauhinia forficata Link., Aegiphila sellowiana Cham., Zeyheria tuberculosa (Vell, Luehea grandiflora Mart. et. Zucc., Croton floribundus Spreng., Trema micrantha (L Blume, Cassia ferruginea (Schrad Schrad ex DC, Senna macranthera (DC ex Collad. H. S. Irwin and Barney and Schinus terebinthifolius Raddi (Anacardiaceae. For each species, litter bags were distributed on and fixed to the soil surface of soil-filled pots (in a greenhouse, or directly to the surface of the same soil type in a natural forest (field. Every 30 days, the dry weight and soil basal respiration in both environments were determined. The cumulative decomposition of leaves varied according to the species, leaf nutrient content and environment. In general, the decomposition rate was lowest for Aegiphila sellowiana and fastest for Bauhinia forficate and Schinus terebinthifolius. This trend was similar under the controlled conditions of a greenhouse and in the field. The selection of species with a differentiated decomposition pattern, suited for different stages of the recovery process, can help improve soil restoration.

Conversion of SPORL pretreated Douglas fir forest residues into microbial lipids with oleaginous yeasts

Science.gov (United States)

Bruce S. Dien; Junyong Zhu; Patricia J. Slininger; Cletus P. Kurtzman; Bryan R. Moser; Patricia J. O' Bryan; Roland Gleisner; Michael A. Cotta

2016-01-01

Douglas fir is the dominant commercial tree grown in the United States. In this study Douglas fir residue was converted to single cell oils (SCO) using oleaginous yeasts. Monosaccharides were extracted from the woody biomass by pretreating with sulfite and dilute sulfuric acid (SPORL process) and hydrolyzing using commercial cellulases. A new SPORL process that uses pH...

TreePOD: Sensitivity-Aware Selection of Pareto-Optimal Decision Trees.

Science.gov (United States)

Muhlbacher, Thomas; Linhardt, Lorenz; Moller, Torsten; Piringer, Harald

2018-01-01

Balancing accuracy gains with other objectives such as interpretability is a key challenge when building decision trees. However, this process is difficult to automate because it involves know-how about the domain as well as the purpose of the model. This paper presents TreePOD, a new approach for sensitivity-aware model selection along trade-offs. TreePOD is based on exploring a large set of candidate trees generated by sampling the parameters of tree construction algorithms. Based on this set, visualizations of quantitative and qualitative tree aspects provide a comprehensive overview of possible tree characteristics. Along trade-offs between two objectives, TreePOD provides efficient selection guidance by focusing on Pareto-optimal tree candidates. TreePOD also conveys the sensitivities of tree characteristics on variations of selected parameters by extending the tree generation process with a full-factorial sampling. We demonstrate how TreePOD supports a variety of tasks involved in decision tree selection and describe its integration in a holistic workflow for building and selecting decision trees. For evaluation, we illustrate a case study for predicting critical power grid states, and we report qualitative feedback from domain experts in the energy sector. This feedback suggests that TreePOD enables users with and without statistical background a confident and efficient identification of suitable decision trees.

Metabolism and Residues of 2,4-Dichlorophenoxyacetic Acid in DAS-40278-9 Maize (Zea mays) Transformed with Aryloxyalkanoate Dioxygenase-1 Gene.

Science.gov (United States)

Zhou, Xiao; Rotondaro, Sandra L; Ma, Mingming; Rosser, Steve W; Olberding, Ed L; Wendelburg, Brian M; Adelfinskaya, Yelena A; Balcer, Jesse L; Blewett, T Craig; Clements, Bruce

2016-10-12

DAS-40278-9 maize, which is developed by Dow AgroSciences, has been genetically modified to express the aryloxyalkanoate dioxygenase-1 (AAD-1) protein and is tolerant to phenoxy auxin herbicides, such as 2,4-dichlorophenoxyacetic acid (2,4-D). To understand the metabolic route and residue distribution of 2,4-D in DAS-40278-9 maize, a metabolism study was conducted with 14 C-radiolabeled 2,4-D applied at the maximum seasonal rate. Plants were grown in boxes outdoors. Forage and mature grain, cobs, and stover were collected for analysis. The metabolism study showed that 2,4-D was metabolized to 2,4-dichlorophenol (2,4-DCP), which was then rapidly conjugated with glucose. Field-scale residue studies with 2,4-D applied at the maximum seasonal rate were conducted at 25 sites in the U.S. and Canada to measure the residues of 2,4-D and free and conjugated 2,4-DCP in mature forage, grain, and stover. Residues of 2,4-D were not detectable in the majority of the grain samples and averaged <1.0 and <1.5 μg/g in forage and stover, respectively. Free plus conjugated 2,4-DCP was not observed in grain and averaged <1.0 μg/g in forage and stover.

Increased resin flow in mature pine trees growing under elevated CO2 and moderate soil fertility

Science.gov (United States)

K.A. Novick; G.G. Katul; H.R. McCarthy; R. Oren

2012-01-01

Warmer climates induced by elevated atmospheric CO2 (eCO2) are expected to increase damaging bark beetle activity in pine forests, yet the effect of eCO2 on resin production—the tree’s primary defense against beetle attack—remains largely unknown. Following growth-differentiation balance theory, if extra carbohydrates produced under eCO2 are not consumed by respiration...

Two Trees: Migrating Fault Trees to Decision Trees for Real Time Fault Detection on International Space Station

Science.gov (United States)

Lee, Charles; Alena, Richard L.; Robinson, Peter

2004-01-01

We started from ISS fault trees example to migrate to decision trees, presented a method to convert fault trees to decision trees. The method shows that the visualizations of root cause of fault are easier and the tree manipulating becomes more programmatic via available decision tree programs. The visualization of decision trees for the diagnostic shows a format of straight forward and easy understands. For ISS real time fault diagnostic, the status of the systems could be shown by mining the signals through the trees and see where it stops at. The other advantage to use decision trees is that the trees can learn the fault patterns and predict the future fault from the historic data. The learning is not only on the static data sets but also can be online, through accumulating the real time data sets, the decision trees can gain and store faults patterns in the trees and recognize them when they come.

Intra-annual dynamics of non-structural carbohydrates in the cambium of mature conifer trees reflects radial growth demands.

Science.gov (United States)

Simard, Sonia; Giovannelli, Alessio; Treydte, Kerstin; Traversi, Maria Laura; King, Gregory M; Frank, David; Fonti, Patrick

2013-09-01

The presence of soluble carbohydrates in the cambial zone, either from sugars recently produced during photosynthesis or from starch remobilized from storage organs, is necessary for radial tree growth. However, considerable uncertainties on carbohydrate dynamics and the consequences on tree productivity exist. This study aims to better understand the variation in different carbon pools at intra-annual resolution by quantifying how cambial zone sugar and starch concentrations fluctuate over the season and in relation to cambial phenology. A comparison between two physiologically different species growing at the same site, i.e., the evergreen Picea abies Karst. and the deciduous Larix decidua Mill., and between L. decidua from two contrasting elevations, is presented to identify mechanisms of growth limitation. Results indicate that the annual cycle of sugar concentration within the cambial zone is coupled to the process of wood formation. The highest sugar concentration is observed when the number of cells in secondary wall formation and lignification stages is at a maximum, subsequent to most radial growth. Starch disappears in winter, while other freeze-resistant non-structural carbohydrates (NSCs) increase. Slight differences in NSC concentration between species are consistent with the differing climate sensitivity of the evergreen and deciduous species investigated. The general absence of differences between elevations suggests that the cambial activity of trees growing at the treeline was not limited by the availability of carbohydrates at the cambial zone but instead by environmental controls on the growing season duration.

Early regeneration response to aggregated overstory and harvest residue retention in Populus tremuloides (Michx.)-dominated forests

Science.gov (United States)

Miranda T. Curzon; Anthony W. D' Amato; Brian J. Palik

2017-01-01

Recent emphasis on increasing structural complexity and species diversity reflective of natural ecosystems through the use of retention harvesting approaches is coinciding with increased demand for forest-derived bioenergy feedstocks, largely sourced through the removal of harvest residues associated with whole-tree harvest. Uncertainties about the consequences of such...

Correlation of Improved Version of Cervical Vertebral Maturation Indicator with Other Growth Maturity Indicators

Directory of Open Access Journals (Sweden)

Tripti Tikku

2013-01-01

Conclusion: The correlation between middle phalanx of 3rd finger (MP3 and cervical vertebral maturation method (CVMI and CVMS was higher as compared to the correlation of either of the cervical vertebral maturation method or MP3 with dental maturation indicator.

Level and pattern of overstory retention influence rates and forms of tree mortality in mature, coniferous forests of the Pacific Northwest, USA

Science.gov (United States)

Lauren S. Urgenson; Charles B. Halpern; Paul D. Anderson

2013-01-01

Mortality of retained trees can compromise the ecological objectives of variable-retention harvest. We used a large-scale experiment replicated at six locations in western Washington and Oregon to examine the influences of retention level (40% vs. 15% of original basal area) and its spatial pattern (aggregated vs.dispersed) on the rate and form of tree mortality for 11...

Developing maturity grids for assessing organisational capabilities

DEFF Research Database (Denmark)

Maier, Anja; Moultrie, James; Clarkson, P John

2009-01-01

Keyword: Maturity Model,Maturity Grid,Maturity Matrix,Organisational Capabilities,Benchmarking,New Product Development,Perfirmance Assessment......Keyword: Maturity Model,Maturity Grid,Maturity Matrix,Organisational Capabilities,Benchmarking,New Product Development,Perfirmance Assessment...

Interactive effects of ozone and climate on tree growth and water use in a southern Appalachian forest in the USA

Science.gov (United States)

S.B. McLaughlin; S.D. Wullschleger; G. Sun

2007-01-01

A lack of data on responses of mature tree growth and water use to ambient ozone (O3) concentrations has been a major limitation in efforts to understand and model responses of forests to current and future changes in climate.Here, hourly to seasonal patterns of stem growth and sap flow velocity were...

[Prediction and spatial distribution of recruitment trees of natural secondary forest based on geographically weighted Poisson model].

Science.gov (United States)

Zhang, Ling Yu; Liu, Zhao Gang

2017-12-01

Based on the data collected from 108 permanent plots of the forest resources survey in Maoershan Experimental Forest Farm during 2004-2016, this study investigated the spatial distribution of recruitment trees in natural secondary forest by global Poisson regression and geographically weighted Poisson regression (GWPR) with four bandwidths of 2.5, 5, 10 and 15 km. The simulation effects of the 5 regressions and the factors influencing the recruitment trees in stands were analyzed, a description was given to the spatial autocorrelation of the regression residuals on global and local levels using Moran's I. The results showed that the spatial distribution of the number of natural secondary forest recruitment was significantly influenced by stands and topographic factors, especially average DBH. The GWPR model with small scale (2.5 km) had high accuracy of model fitting, a large range of model parameter estimates was generated, and the localized spatial distribution effect of the model parameters was obtained. The GWPR model at small scale (2.5 and 5 km) had produced a small range of model residuals, and the stability of the model was improved. The global spatial auto-correlation of the GWPR model residual at the small scale (2.5 km) was the lowe-st, and the local spatial auto-correlation was significantly reduced, in which an ideal spatial distribution pattern of small clusters with different observations was formed. The local model at small scale (2.5 km) was much better than the global model in the simulation effect on the spatial distribution of recruitment tree number.

Total effects of contact and residual exposure of bifenthrin and λ-cyhalothrin on the predatory mite Galendromus occidentalis (Acari: Phytoseiidae).

Science.gov (United States)

Hamby, Kelly A; Alifano, Jesse A; Zalom, Frank G

2013-10-01

Pyrethroid insecticides are generally regarded as acutely toxic to predatory phytoseiid mites; however, persistence of hull split spray pyrethroid residues on almond trees and their effects on phytoseiids have not been quantified over time. Hull split, the separation of the almond hull along the suture, exposes the new crop nuts to infestation by Amyelois transitella (Walker) larvae, and is the preferred timing for insecticides applied for their control. Galendromus occidentalis (Nesbitt) is the most important phytoseiid biocontrol agent for web-spinning spider mites in California (USA) almond orchards, and the impact of bifenthrin and λ-cyhalothrin pyrethroid residue on their survival, fertility, and fecundity was determined. The total effects of direct contact with esfenvalerate, permethrin, bifenthrin and λ-cyhalothrin were also evaluated for comparison. The total effects (E) of direct contact treatments of the four pyrethroids ranged from 77.8 % for esfenvalerate to 98.8 % for bifenthrin. Both bifenthrin and λ-cyhalothrin twig residue would be considered harmful (IOBC class 4) following field application at hull split timing. Bifenthrin twig residue would be considered slightly harmful (IOBC class 2) for up to 3.5 months and harmless (IOBC class 1) after 6 months. λ-cyhalothrin residue would be considered moderately harmful (IOBC class 3) for up to 3.5 months following application and harmless (IOBC class 1) after 6 months. Bifenthrin and λ-cyhalothrin twig residue on treated trees significantly reduced G. occidentalis female survival for up to 6 months post-treatment, however total effects (E) classify these residues as harmless (IOBC class 1) after 6 months. Harmful effects of direct and residual exposure following application have implications for the use of these pyrethroids in an integrated mite management program for perennial crops.

Rhizobial inoculation increases soil microbial functioning and gum arabic production of 13-years old Senegalia senegal (L. Britton, trees in the North part of Senegal

Directory of Open Access Journals (Sweden)

Dioumacor FALL

2016-09-01

Full Text Available Abstract Rhizobial inoculation has been widely used in controlled conditions as a substitute for chemical fertilizers to increase plants growth and productivity. However, very little is known about such effects on mature trees in natural habitats. In this study, we investigated the effect of rhizobial inoculation on soil total microbial biomass, mineral nitrogen content, potential CO2 respiration, fluorescein diacetate (FDA, acid phosphatase activities and gum arabic production by 13-years old Senegalia senegal (Syn. Acacia senegal under natural conditions in the north part of Senegal during two consecutive years. Rhizobial inoculation was performed at the beginning of the rainy season (July for both years with a cocktail of four strains (CIRADF 300, CIRADF 301, CIRADF 302 and CIRADF 303. Rhizospheric soils were collected in both dry and rainy seasons to a depth of 0-25 cm under uninoculated (UIN and inoculated (IN trees. Trees were tapped in November (beginning of dry season using traditional tools. Gum arabic was harvested every 15 days from December to March. The results obtained from both years demonstrated that rhizobial inoculation increased significantly the percentage of trees producing gum arabic, gum arabic production per tree, soil microbial biomass, FDA and acid phosphatase activities. However, there was no significant effect on C mineralization and mineral nitrogen (N content. Gum arabic production was positively correlated to rainfall, soil microbial biomass and mineral nitrogen content. Our results showed a positive effect of rhizobial inoculation on soil microbial functioning and gum arabic production by mature S. senegal trees. These important findings deserve to be conducted in several contrasting sites in order to improve gum arabic production and contribute to increase rural population incomes.

Rhizobial Inoculation Increases Soil Microbial Functioning and Gum Arabic Production of 13-Year-Old Senegalia senegal (L.) Britton, Trees in the North Part of Senegal.

Science.gov (United States)

Fall, Dioumacor; Bakhoum, Niokhor; Nourou Sall, Saïdou; Zoubeirou, Alzouma Mayaki; Sylla, Samba N; Diouf, Diegane

2016-01-01

Rhizobial inoculation has been widely used in controlled conditions as a substitute for chemical fertilizers to increase plants growth and productivity. However, very little is known about such effects on mature trees in natural habitats. In this study, we investigated the effect of rhizobial inoculation on soil total microbial biomass, mineral nitrogen content, potential CO2 respiration, fluorescein diacetate (FDA), acid phosphatase activities, and gum arabic production by 13-year-old Senegalia senegal (synonym: Acacia senegal) under natural conditions in the north part of Senegal during two consecutive years. Rhizobial inoculation was performed at the beginning of the rainy season (July) for both years with a cocktail of four strains (CIRADF 300, CIRADF 301, CIRADF 302, and CIRADF 303). Rhizospheric soils were collected in both dry and rainy seasons to a depth of 0-25 cm under uninoculated and inoculated trees. Trees were tapped in November (beginning of dry season) using traditional tools. Gum arabic was harvested every 15 days from December to March. The results obtained from both years demonstrated that rhizobial inoculation increased significantly the percentage of trees producing gum arabic, gum arabic production per tree, soil microbial biomass, FDA, and acid phosphatase activities. However, there was no significant effect on C mineralization and mineral nitrogen (N) content. Gum arabic production was positively correlated to rainfall, soil microbial biomass, and mineral nitrogen content. Our results showed a positive effect of rhizobial inoculation on soil microbial functioning and gum arabic production by mature S. senegal trees. These important findings deserve to be conducted in several contrasting sites in order to improve gum arabic production and contribute to increase rural population incomes.

People Capability Maturity Model. SM.

Science.gov (United States)

1995-09-01

tailored so it consumes less time and resources than a traditional software process assessment or CMU/SEI-95-MM-02 People Capability Maturity Model...improved reputation or customer loyalty. CMU/SEI-95-MM-02 People Capability Maturity Model ■ L5-17 Coaching Level 5: Optimizing Activity 1...Maturity Model CMU/SEI-95-MM-62 Carnegie-Mellon University Software Engineering Institute DTIC ELECTE OCT 2 7 1995 People Capability Maturity

Physiological acclimation dampens initial effects of elevated temperature and atmospheric CO2 concentration in mature boreal Norway spruce.

Science.gov (United States)

Lamba, Shubhangi; Hall, Marianne; Räntfors, Mats; Chaudhary, Nitin; Linder, Sune; Way, Danielle; Uddling, Johan; Wallin, Göran

2018-02-01

Physiological processes of terrestrial plants regulate the land-atmosphere exchange of carbon, water, and energy, yet few studies have explored the acclimation responses of mature boreal conifer trees to climate change. Here we explored the acclimation responses of photosynthesis, respiration, and stomatal conductance to elevated temperature and/or CO 2 concentration ([CO 2 ]) in a 3-year field experiment with mature boreal Norway spruce. We found that elevated [CO 2 ] decreased photosynthetic carboxylation capacity (-23% at 25 °C) and increased shoot respiration (+64% at 15 °C), while warming had no significant effects. Shoot respiration, but not photosynthetic capacity, exhibited seasonal acclimation. Stomatal conductance at light saturation and a vapour pressure deficit of 1 kPa was unaffected by elevated [CO 2 ] but significantly decreased (-27%) by warming, and the ratio of intercellular to ambient [CO 2 ] was enhanced (+17%) by elevated [CO 2 ] and decreased (-12%) by warming. Many of these responses differ from those typically observed in temperate tree species. Our results show that long-term physiological acclimation dampens the initial stimulation of plant net carbon assimilation to elevated [CO 2 ], and of plant water use to warming. Models that do not account for these responses may thus overestimate the impacts of climate change on future boreal vegetation-atmosphere interactions. © 2017 John Wiley & Sons Ltd.

Tree Nut Allergies

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... Blog Vision Awards Common Allergens Tree Nut Allergy Tree Nut Allergy Learn about tree nut allergy, how ... a Tree Nut Label card . Allergic Reactions to Tree Nuts Tree nuts can cause a severe and ...

Identification and Characterization of Liver MicroRNAs of the Chinese Tree Shrew via Deep Sequencing.

Science.gov (United States)

Feng, Yue; Feng, Yue-Mei; Feng, Yang; Lu, Caixia; Liu, Li; Sun, Xiaomei; Dai, Jiejie; Xia, Xueshan

2015-10-01

Chinese tree shrew (Tupaia belangeri chinensis) is a small animal that possess many features, which are valuable in biomedical research, as experimental models. Currently, there are numerous attempts to utilize tree shrews as models for hepatitis C virus (HCV) infection. This study aimed to construct a liver microRNA (miRNA) data of the tree shrew. Three second filial generation tree shrews were used in this study. Total RNA was extracted from each liver of the tree shrew and equal quality mixed, then reverse-transcribed to complementary DNA (cDNA). The cDNAs were amplified by polymerase chain reaction and subjected to high-throughput sequencing. A total of 2060 conserved miRNAs were identified through alignment with the mature miRNAs in miRBase 20.0 database. The gene ontology and Kyoto encyclopedia of genes and genomes analyses of the target genes of the miRNAs revealed several candidate miRNAs, genes and pathways that may involve in the process of HCV infection. The abundance of miR-122 and Let-7 families and their other characteristics provided us more evidences for the utilization of this animal, as a potential model for HCV infection and other related biomedical research. Moreover, 80 novel microRNAs were predicted using the software Mireap. The top 3 abundant miRNAs were validated in other tree samples, based on stem-loop quantitative reverse transcription-polymerase chain reaction. According to the liver microRNA data of Chinese tree shrew, characteristics of the miR-122 and Let-7 families further highlight the suitability of tree shrew as the animal model in HCV research.

IT Governance Maturity: Developing a Maturity Model Using the Delphi Method

NARCIS (Netherlands)

Smits, Daniël; van Hillegersberg, Jos

2015-01-01

To advance in maturity, organizations should pay attention to both the hard and soft sides of IT governance (ITG). The hard side is related to processes and structure, the soft side to social aspects like behavior and organizational culture. This paper describes a study to develop an ITG maturity

Tree Species Suitability to Bioswales and Impact on the Urban Water Budget.

Science.gov (United States)

Scharenbroch, Bryant C; Morgenroth, Justin; Maule, Brian

2016-01-01

Water movement between soil and the atmosphere is restricted by hardscapes in the urban environment. Some green infrastructure is intended to increase infiltration and storage of water, thus decreasing runoff and discharge of urban stormwater. Bioswales are a critical component of a water-sensitive urban design (or a low-impact urban design), and incorporation of trees into these green infrastructural components is believed to be a novel way to return stored water to the atmosphere via transpiration. This research was conducted in The Morton Arboretum's main parking lot, which is one of the first and largest green infrastructure installations in the midwestern United States. The parking lot is constructed of permeable pavers and tree bioswales. Trees in bioswales were evaluated for growth and condition and for their effects on water cycling via transpiration. Our data indicate that trees in bioswales accounted for 46 to 72% of total water outputs via transpiration, thereby reducing runoff and discharge from the parking lot. By evaluating the stomatal conductance, diameter growth, and condition of a variety of tree species in these bioswales, we found that not all species are equally suited for bioswales and that not all are equivalent in their transpiration and growth rates, thereby contributing differentially to the functional capacity of bioswales. We conclude that species with high stomatal conductance and large mature form are likely to contribute best to bioswale function. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Big trees, old trees, and growth factor tables

Science.gov (United States)

Kevin T. Smith

2018-01-01

The potential for a tree to reach a great size and to live a long life frequently captures the public's imagination. Sometimes the desire to know the age of an impressively large tree is simple curiosity. For others, the date-of-tree establishment can make a big diff erence for management, particularly for trees at historic sites or those mentioned in property...

A Suffix Tree Or Not a Suffix Tree?

DEFF Research Database (Denmark)

Starikovskaya, Tatiana; Vildhøj, Hjalte Wedel

2015-01-01

In this paper we study the structure of suffix trees. Given an unlabeled tree r on n nodes and suffix links of its internal nodes, we ask the question “Is r a suffix tree?”, i.e., is there a string S whose suffix tree has the same topological structure as r? We place no restrictions on S, in part...

Exploring Association between Morphology of Tree Planting and User Activities in Urban Public Space; An opportunity of Urban Public Space Revitalisation

Science.gov (United States)

Shen, Qi; Liu, Yan

2018-03-01

This paper discusses the association between the morphology of tree planting in urban riverside brown field and user activities. With the growth of popularity, the revitalisation of urban public space is also promising. This research used drone photography and mapping to systematically surveys sample sites. An original observation study of user activities proceed in four sample public spaces in Sheffield. The study results found there are huge popularity and duration difference of user activities between various tree planting morphologies and typologies. The public space with lawn and rounded by mature trees attracted most users with the most activity types; the neat and silent public space is the favourite choice of lunch and reading, meanwhile it got the longest activity duration; but the space with sparse morphology and small trees are more likely be forgotten and abandoned. This finding offered a great opportunity for urban public space revitalisation in post-industrial cities.

Tree age affects physicochemical, functional quality and storability of Amrapali mango (Mangifera indica L.) fruits.

Science.gov (United States)

Meena, Nirmal Kumar; Asrey, Ram

2017-12-12

The effect of tree age on physicochemical quality attributes and storage behaviour of Amrapali mango fruit was evaluated. Physiologically mature fruits were harvested from 6-, 18- and 30-year-old trees and kept for ripening under ambient conditions (temperature 35 ± 3 °C, relative humidity 60 ± 5%). Observations were recorded at 3-day intervals. Highest total soluble solids and total sugars were found in the fruit sourced from 18-year-old trees. At the end of storage, least titratable acidity (0.17%) and higher carotenoids (10.86 mg 100 g -1 ) were found in 30-year-old tree fruits during the last day of storage. Highest total phenols (TP) (251.33 μg gallic acid g -1 ), antioxidant capacity (AC) (5.63 μmol Trolox g -1 ) and ascorbic acid (AA) (31.13 mg 100 g -1 ) were reported in fruits from younger trees of 6 years old. Maximum respiratory and ethylene evolution peak was observed in fruits obtained from oldest trees, whereas least activities of pectin methyl esterase (0.31 μmol min -1 g -1 fresh weight) and polygalacturonase (53.67 μg galacturonic acid g -1 h -1 ) were observed in 6-year-old tree fruits at the end of the 9-day storage period. Higher total soluble solids and total sugars were found in fruit harvested from middle-age-group (18-year-old) trees during the entire storage period of 9 days. Most of the functional parameters, such as TP, AC and AA, were observed to be higher in fruits from younger (6-year-old) trees. The obtained results revealed that produce from middle-age-group (18-year-old) Amrapali mango orchards suit consumers' and processors' requirements. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Tree Biomass Allocation and Its Model Additivity for Casuarina equisetifolia in a Tropical Forest of Hainan Island, China

Science.gov (United States)

Xue, Yang; Yang, Zhongyang; Wang, Xiaoyan; Lin, Zhipan; Li, Dunxi; Su, Shaofeng

2016-01-01

Casuarina equisetifolia is commonly planted and used in the construction of coastal shelterbelt protection in Hainan Island. Thus, it is critical to accurately estimate the tree biomass of Casuarina equisetifolia L. for forest managers to evaluate the biomass stock in Hainan. The data for this work consisted of 72 trees, which were divided into three age groups: young forest, middle-aged forest, and mature forest. The proportion of biomass from the trunk significantly increased with age (Pbiomass of the branch and leaf decreased, and the biomass of the root did not change. To test whether the crown radius (CR) can improve biomass estimates of C. equisetifolia, we introduced CR into the biomass models. Here, six models were used to estimate the biomass of each component, including the trunk, the branch, the leaf, and the root. In each group, we selected one model among these six models for each component. The results showed that including the CR greatly improved the model performance and reduced the error, especially for the young and mature forests. In addition, to ensure biomass additivity, the selected equation for each component was fitted as a system of equations using seemingly unrelated regression (SUR). The SUR method not only gave efficient and accurate estimates but also achieved the logical additivity. The results in this study provide a robust estimation of tree biomass components and total biomass over three groups of C. equisetifolia. PMID:27002822

Tree Biomass Allocation and Its Model Additivity for Casuarina equisetifolia in a Tropical Forest of Hainan Island, China.

Science.gov (United States)

Xue, Yang; Yang, Zhongyang; Wang, Xiaoyan; Lin, Zhipan; Li, Dunxi; Su, Shaofeng

2016-01-01

Casuarina equisetifolia is commonly planted and used in the construction of coastal shelterbelt protection in Hainan Island. Thus, it is critical to accurately estimate the tree biomass of Casuarina equisetifolia L. for forest managers to evaluate the biomass stock in Hainan. The data for this work consisted of 72 trees, which were divided into three age groups: young forest, middle-aged forest, and mature forest. The proportion of biomass from the trunk significantly increased with age (Pbiomass of the branch and leaf decreased, and the biomass of the root did not change. To test whether the crown radius (CR) can improve biomass estimates of C. equisetifolia, we introduced CR into the biomass models. Here, six models were used to estimate the biomass of each component, including the trunk, the branch, the leaf, and the root. In each group, we selected one model among these six models for each component. The results showed that including the CR greatly improved the model performance and reduced the error, especially for the young and mature forests. In addition, to ensure biomass additivity, the selected equation for each component was fitted as a system of equations using seemingly unrelated regression (SUR). The SUR method not only gave efficient and accurate estimates but also achieved the logical additivity. The results in this study provide a robust estimation of tree biomass components and total biomass over three groups of C. equisetifolia.

MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors.

Directory of Open Access Journals (Sweden)

Katerina Gkirtzou

Full Text Available BACKGROUND: MicroRNAs (miRNAs are small, single stranded RNAs with a key role in post-transcriptional regulation of thousands of genes across numerous species. While several computational methods are currently available for identifying miRNA genes, accurate prediction of the mature miRNA remains a challenge. Existing approaches fall short in predicting the location of mature miRNAs but also in finding the functional strand(s of miRNA precursors. METHODOLOGY/PRINCIPAL FINDINGS: Here, we present a computational tool that incorporates a Naive Bayes classifier to identify mature miRNA candidates based on sequence and secondary structure information of their miRNA precursors. We take into account both positive (true mature miRNAs and negative (same-size non-mature miRNA sequences examples to optimize sensitivity as well as specificity. Our method can accurately predict the start position of experimentally verified mature miRNAs for both human and mouse, achieving a significantly larger (often double performance accuracy compared with two existing methods. Moreover, the method exhibits a very high generalization performance on miRNAs from two other organisms. More importantly, our method provides direct evidence about the features of miRNA precursors which may determine the location of the mature miRNA. We find that the triplet of positions 7, 8 and 9 from the mature miRNA end towards the closest hairpin have the largest discriminatory power, are relatively conserved in terms of sequence composition (mostly contain a Uracil and are located within or in very close proximity to the hairpin loop, suggesting the existence of a possible recognition site for Dicer and associated proteins. CONCLUSIONS: This work describes a novel algorithm for identifying the start position of mature miRNA(s produced by miRNA precursors. Our tool has significantly better (often double performance than two existing approaches and provides new insights about the potential use

Limited growth recovery after drought-induced forest dieback in very defoliated trees of two pine species

Directory of Open Access Journals (Sweden)

Guillermo eGuada

2016-04-01

Full Text Available Mediterranean pine forests display high resilience after extreme climatic events such as severe droughts. However, recent dry spells causing growth decline and triggering forest dieback challenge the capacity of some forests to recover following major disturbances. To describe how resilient the responses of forests to drought can be, we quantified growth dynamics in plantations of two pine species (Scots pine, black pine located in south-eastern Spain and showing drought-triggered dieback. Radial growth was characterized at inter- (tree-ring width and intra-annual (xylogenesis scales in three defoliation levels. It was assumed that the higher defoliation the more negative the impact of drought on tree growth. Tree-ring width chronologies were built and xylogenesis was characterized three years after the last severe drought occurred. Annual growth data and the number of tracheids produced in different stages of xylem formation were related to climate data at several time scales. Drought negatively impacted growth of the most defoliated trees in both pine species. In Scots pine, xylem formation started earlier in the non-defoliated than in the most defoliated trees. Defoliated trees presented the shortest duration of the radial-enlargement phase in both species. On average the most defoliated trees formed 60% of the number of mature tracheids formed by the non-defoliated trees in both species. Since radial enlargement is the xylogenesis phase most tightly related to final growth, this explains why the most defoliated trees grew the least due to their altered xylogenesis phases. Our findings indicate a very limited resilience capacity of drought-defoliated Scots and black pines. Moreover, droughts produce legacy effects on xylogenesis of highly defoliated trees which could not recover previous growth rates and are thus more prone to die.

Academic Achievement of High School Students in Relation to Their Anxiety, Emotional Maturity and Social Maturity

Science.gov (United States)

Puar, Surjit Singh

2013-01-01

The present study has been designed to investigate the non-cognitive variables like anxiety, emotional maturity and social maturity and their relationship with academic achievement and also to see the locale-wise differences on the basis of their anxiety, emotional maturity and social maturity. The study was conducted over a sample of 400 (200…

Costs and benefits of insecticide and foliar nutrient applications to huanglongbing-infected citrus trees.

Science.gov (United States)

Tansey, James A; Vanaclocha, Pilar; Monzo, Cesar; Jones, Moneen; Stansly, Philip A

2017-05-01

The Asian citrus psyllid (ACP), Diaphorina citri Kuwayama (Hemiptera: Psyllidae), vectors Candidatus Liberibacter asiaticus, which causes huanglongbing (HLB). In Florida, HLB incidence is approaching 100% statewide. Yields have decreased and production costs have increased since 2005. Despite this, some growers are maintaining a level of production and attribute this in part to aggressive psyllid control and foliar nutrition sprays. However, the value of these practices is debated. A replicated field study was initiated in 2008 in a commercial block of 'Valencia' sweet orange trees to evaluate individual and combined effects of foliar nutrition and ACP control. Results from 2012-2016 are presented. Insecticides consistently reduced ACP populations. However, neither insecticide nor nutrition applications significantly influenced HLB incidence or PCR copy number in mature trees. In reset trees, infection continued to build and reached 100% in all treatments. Greatest yields (kg fruit ha -1 ) and production (kg solids ha -1 ) were obtained from trees receiving both insecticides and foliar nutrition. All treatments resulted in production and financial gains relative to controls. However, material and application costs associated with the nutrition component offset these gains, resulting in lesser benefits than insecticides applied alone. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

Leveraging People-Related Maturity Issues for Achieving Higher Maturity and Capability Levels

Science.gov (United States)

Buglione, Luigi

During the past 20 years Maturity Models (MM) become a buzzword in the ICT world. Since the initial Crosby's idea in 1979, plenty of models have been created in the Software & Systems Engineering domains, addressing various perspectives. By analyzing the content of the Process Reference Models (PRM) in many of them, it can be noticed that people-related issues have little weight in the appraisals of the capabilities of organizations while in practice they are considered as significant contributors in traditional process and organizational performance appraisals, as stressed instead in well-known Performance Management models such as MBQA, EFQM and BSC. This paper proposes some ways for leveraging people-related maturity issues merging HR practices from several types of maturity models into the organizational Business Process Model (BPM) in order to achieve higher organizational maturity and capability levels.

Elevated CO{sub 2} in a prototype free-air CO{sub 2} enrichment facility affects photosynthetic nitrogen relations in a maturing pine forest

Energy Technology Data Exchange (ETDEWEB)

Ellsworth, D.S.; LaRoche, J.; Hendrey, G.R.

1998-03-01

A maturing loblolly pine (Pinus taeda L.) forest was exposed to elevated CO{sub 2} in the natural environment in a perturbation study conducted over three seasons using the free-air CO{sub 2} enrichment (FACE) technique. At the time measurements were begun in this study, the pine canopy was comprised entirely of foliage which had developed under elevated CO{sub 2} conditions (atmospheric CO{sub 2} {approx} 550 {micro}mol/mol{sup {minus}1}). Measurements of leaf photosynthetic responses to CO{sub 2} were taken to examine the effects of elevated CO{sub 2} on photosynthetic N nutrition in a pine canopy under elevated CO{sub 2}. Photosynthetic CO{sub 2} response curves (A-c{sub i} curves) were similar in FACE trees under elevated CO{sub 2} compared with counterpart trees in ambient plots for the first foliage cohort produced in the second season of CO{sub 2} exposure, with changes in curve form detected in the foliage cohorts subsequently produced under elevated CO{sub 2}. Differences in the functional relationship between carboxylation rate and N{sub a} suggest that for a given N{sub a} allocated among successive cohorts of foliage in the upper canopy, V{sub c max} was 17% lower in FACE versus Ambient trees. The authors also found that foliar Rubisco content per unit total protein derived from Western blot analysis was lower in late-season foliage in FACE foliage compared with ambient-grown foliage. The results illustrate a potentially important mode of physiological adjustment to growth conditions that may operate in forest canopies. Findings suggest that mature loblolly pine trees growing in the field may have the capacity for shifts in intrinsic nitrogen utilization for photosynthesis under elevated CO{sub 2} that are not dependent on changes in leaf N. Findings suggest a need for continued examination of internal feedbacks at the whole-tree and ecosystem level in forests that may influence long-term photosynthetic responses to elevated CO{sub 2}.

Methane emissions from bald cypress tree trunks in a bottomland forest

Science.gov (United States)

Schile, L. M.; Pitz, S.; Megonigal, P.

2013-12-01

Studies on natural methane emissions predominantly have occurred on wetland soils with herbaceous plant species. Less attention, however, has been placed on the role of woody wetland plant species in the methane cycle. Recent studies on methane emissions from tree trunks document that they are a significant source of emissions that previously has been not accounted for. In this study, we examine methane emissions from trunks of mature bald cypress (Taxodium distichum), which is a dominant tree species in bottomland hardwood forests of the Southeastern United States. To date, little is known about soil methane emissions in these systems, and published tree emissions have been limited to a single study conducted on bald cypress knees. In May 2013, we established a plot in a monospecific bald cypress stand planted approximately 70 years ago on the Chesapeake Bay in Maryland and are monitoring methane emissions on 12 tree trunks, soil chambers, and pore-water over the course of a year. Custom-made 30 cm tall open face rectangular tree chambers were constructed out of white acrylic sheets and secured on each tree at a midpoint of 45 cm above the soil surface. Chambers were lined with neoprene along the tree surface and sealed with an epoxy. On three trees that varied in trunk diameter, chambers were placed at average heights of 95, 145, 195, and 345 cm from the soil surface in order to calculate a decay curve of methane emissions. Once a month, chambers were sealed with lids and head-space samples were collected over the course of an hour. Methane flux was calculated and compared to emissions from soil chambers. Average cypress trunk methane fluxes ranged from 17.7 μmole m-2 hr-1 in May to 49.5 and 116.5 μmole m-2 hr-1 in June and July, respectively. Soil fluxes averaged 28.5 μmole m-2 hr-1 in May and June, and decreased to 13.7 μmole m-2 hr-1 in July. Methane emissions decreased exponentially up the tree trunk, with fluxes of 2 μmole m-2 hr-1 and less calculated

Tree-growth analyses to estimate tree species' drought tolerance

NARCIS (Netherlands)

Eilmann, B.; Rigling, A.

2012-01-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

TreeNetViz: revealing patterns of networks over tree structures.

Science.gov (United States)

Gou, Liang; Zhang, Xiaolong Luke

2011-12-01

Network data often contain important attributes from various dimensions such as social affiliations and areas of expertise in a social network. If such attributes exhibit a tree structure, visualizing a compound graph consisting of tree and network structures becomes complicated. How to visually reveal patterns of a network over a tree has not been fully studied. In this paper, we propose a compound graph model, TreeNet, to support visualization and analysis of a network at multiple levels of aggregation over a tree. We also present a visualization design, TreeNetViz, to offer the multiscale and cross-scale exploration and interaction of a TreeNet graph. TreeNetViz uses a Radial, Space-Filling (RSF) visualization to represent the tree structure, a circle layout with novel optimization to show aggregated networks derived from TreeNet, and an edge bundling technique to reduce visual complexity. Our circular layout algorithm reduces both total edge-crossings and edge length and also considers hierarchical structure constraints and edge weight in a TreeNet graph. These experiments illustrate that the algorithm can reduce visual cluttering in TreeNet graphs. Our case study also shows that TreeNetViz has the potential to support the analysis of a compound graph by revealing multiscale and cross-scale network patterns. © 2011 IEEE

Efficacy of insecticide residues on adult Halyomorpha halys (Stål) (Hemiptera: Pentatomidae) mortality and injury in apple and peach orchards.

Science.gov (United States)

Leskey, Tracy C; Short, Brent D; Lee, Doo-Hyung

2014-07-01

The primary threat from Halyomorpha halys (Stål) (Hemiptera: Pentatomidae) originates from populations continuously dispersing from and among wild and cultivated hosts, so many individuals may not be directly sprayed with insecticides. Limited information exists regarding field-based residual activity of insecticides for management of H. halys in tree fruit. Thus, we conducted field-based bioassays in apple and peach orchards to evaluate residual activity of insecticides commonly applied against H. halys. Adults used in these trials were collected from wild and cultivated hosts less than one week prior to testing to more accurately reflect the susceptibility of wild H. halys populations in the field throughout the season. Significantly higher mortality rates of Halyomorpha halys were observed early in the growing season, when overwintered adults were prevalent, compared with populations present later in the growing season that included new generation adults. Significantly higher mortality was recorded for adults exposed to fresh insecticide applications compared with three- and seven-day old residues. Typically, the addition of an adjuvant did not enhance efficacy or residual activity of insecticides. Significantly fewer injury sites were recorded on apples treated with dinotefuran and fenpropathrin compared with the untreated apples for all residue ages. Overwintered Halyomorpha halys populations are easier to kill with insecticide applications than the first and second generation which are present in the field during the mid- to late-season. Residual activity of nearly all insecticides decreased significantly three days after application and adjuvants generally did not increase residual activity. These factors should be considered in developing season-long programs for management of this invasive species in tree fruit. © 2013 Society of Chemical Industry.

A mechanical design principle for tissue structure and function in the airway tree.

Science.gov (United States)

LaPrad, Adam S; Lutchen, Kenneth R; Suki, Béla

2013-01-01

With every breath, the dynamically changing mechanical pressures must work in unison with the cells and soft tissue structures of the lung to permit air to efficiently traverse the airway tree and undergo gas exchange in the alveoli. The influence of mechanics on cell and tissue function is becoming apparent, raising the question: how does the airway tree co-exist within its mechanical environment to maintain normal cell function throughout its branching structure of diminishing dimensions? We introduce a new mechanical design principle for the conducting airway tree in which mechanotransduction at the level of cells is driven to orchestrate airway wall structural changes that can best maintain a preferred mechanical microenvironment. To support this principle, we report in vitro radius-transmural pressure relations for a range of airway radii obtained from healthy bovine lungs and model the data using a strain energy function together with a thick-walled cylinder description. From this framework, we estimate circumferential stresses and incremental Young's moduli throughout the airway tree. Our results indicate that the conducting airways consistently operate within a preferred mechanical homeostatic state, termed mechanical homeostasis, that is characterized by a narrow range of circumferential stresses and Young's moduli. This mechanical homeostatic state is maintained for all airways throughout the tree via airway wall dimensional and mechanical relationships. As a consequence, cells within the airway walls throughout the airway tree experience similar oscillatory strains during breathing that are much smaller than previously thought. Finally, we discuss the potential implications of how the maintenance of mechanical homeostasis, while facilitating healthy tissue-level alterations necessary for maturation, may lead to airway wall structural changes capable of chronic asthma.

A mechanical design principle for tissue structure and function in the airway tree.

Directory of Open Access Journals (Sweden)

Adam S LaPrad

Full Text Available With every breath, the dynamically changing mechanical pressures must work in unison with the cells and soft tissue structures of the lung to permit air to efficiently traverse the airway tree and undergo gas exchange in the alveoli. The influence of mechanics on cell and tissue function is becoming apparent, raising the question: how does the airway tree co-exist within its mechanical environment to maintain normal cell function throughout its branching structure of diminishing dimensions? We introduce a new mechanical design principle for the conducting airway tree in which mechanotransduction at the level of cells is driven to orchestrate airway wall structural changes that can best maintain a preferred mechanical microenvironment. To support this principle, we report in vitro radius-transmural pressure relations for a range of airway radii obtained from healthy bovine lungs and model the data using a strain energy function together with a thick-walled cylinder description. From this framework, we estimate circumferential stresses and incremental Young's moduli throughout the airway tree. Our results indicate that the conducting airways consistently operate within a preferred mechanical homeostatic state, termed mechanical homeostasis, that is characterized by a narrow range of circumferential stresses and Young's moduli. This mechanical homeostatic state is maintained for all airways throughout the tree via airway wall dimensional and mechanical relationships. As a consequence, cells within the airway walls throughout the airway tree experience similar oscillatory strains during breathing that are much smaller than previously thought. Finally, we discuss the potential implications of how the maintenance of mechanical homeostasis, while facilitating healthy tissue-level alterations necessary for maturation, may lead to airway wall structural changes capable of chronic asthma.

The Lys-Asp-Tyr Triad within the Mite Allergen Der p 1 Propeptide Is a Critical Structural Element for the pH-Dependent Initiation of the Protease Maturation.

Science.gov (United States)

Chevigné, Andy; Campizi, Vincenzo; Szpakowska, Martyna; Bourry, David; Dumez, Marie-Eve; Martins, José C; Matagne, André; Galleni, Moreno; Jacquet, Alain

2017-05-20

The major house dust mite allergen, Der p 1, is a papain-like cysteine protease expressed as an inactive precursor, proDer p 1, carrying an N-terminal propeptide with a unique structure. The maturation of the zymogen into an enzymatically-active form of Der p 1 is a multistep autocatalytic process initiated under acidic conditions through conformational changes of the propeptide, leading to the loss of its inhibitory ability and its subsequent gradual cleavage. The aims of this study were to characterize the residues present in the Der p 1 propeptide involved in the initiation of the zymogen maturation process, but also to assess the impact of acidic pH on the propeptide structure, the activity of Der p 1 and the fate of the propeptide. Using various complementary enzymatic and structural approaches, we demonstrated that a structural triad K17p-D51p-Y19p within the N-terminal domain of the propeptide is essential for its stabilization and the sensing of pH changes. Particularly, the protonation of D51p under acidic conditions unfolds the propeptide through disruption of the K17p-D51p salt bridge, reduces its inhibition capacity and unmasks the buried residues K17p and Y19p constituting the first maturation cleavage site of the zymogen. Our results also evidenced that this triad acts in a cooperative manner with other propeptide pH-responsive elements, including residues E56p and E80p, to promote the propeptide unfolding and/or to facilitate its proteolysis. Furthermore, we showed that acidic conditions modify Der p 1 proteolytic specificity and confirmed that the formation of the first intermediate represents the limiting step of the in vitro Der p 1 maturation process. Altogether, our results provide new insights into the early events of the mechanism of proDer p 1 maturation and identify a unique structural triad acting as a stabilizing and a pH-sensing regulatory element.

The Lys-Asp-Tyr Triad within the Mite Allergen Der p 1 Propeptide Is a Critical Structural Element for the pH-Dependent Initiation of the Protease Maturation

Directory of Open Access Journals (Sweden)

Andy Chevigné

2017-05-01

Full Text Available The major house dust mite allergen, Der p 1, is a papain-like cysteine protease expressed as an inactive precursor, proDer p 1, carrying an N-terminal propeptide with a unique structure. The maturation of the zymogen into an enzymatically-active form of Der p 1 is a multistep autocatalytic process initiated under acidic conditions through conformational changes of the propeptide, leading to the loss of its inhibitory ability and its subsequent gradual cleavage. The aims of this study were to characterize the residues present in the Der p 1 propeptide involved in the initiation of the zymogen maturation process, but also to assess the impact of acidic pH on the propeptide structure, the activity of Der p 1 and the fate of the propeptide. Using various complementary enzymatic and structural approaches, we demonstrated that a structural triad K17p-D51p-Y19p within the N-terminal domain of the propeptide is essential for its stabilization and the sensing of pH changes. Particularly, the protonation of D51p under acidic conditions unfolds the propeptide through disruption of the K17p-D51p salt bridge, reduces its inhibition capacity and unmasks the buried residues K17p and Y19p constituting the first maturation cleavage site of the zymogen. Our results also evidenced that this triad acts in a cooperative manner with other propeptide pH-responsive elements, including residues E56p and E80p, to promote the propeptide unfolding and/or to facilitate its proteolysis. Furthermore, we showed that acidic conditions modify Der p 1 proteolytic specificity and confirmed that the formation of the first intermediate represents the limiting step of the in vitro Der p 1 maturation process. Altogether, our results provide new insights into the early events of the mechanism of proDer p 1 maturation and identify a unique structural triad acting as a stabilizing and a pH-sensing regulatory element.

TREE SELECTING AND TREE RING MEASURING IN DENDROCHRONOLOGICAL INVESTIGATIONS

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Sefa Akbulut

2004-04-01

Full Text Available Dendrochronology is a method of dating which makes use of the annual nature of tree growth. Dendrochronology may be divided into a number of subfields, each of which covers one or more aspects of the use of tree ring data: dendroclimatology, dendrogeomorphology, dendrohydrology, dendroecology, dendroarchaelogy, and dendrogylaciology. Basic of all form the analysis of the tree rings. The wood or tree rings can aid to dating past events about climatology, ecology, geology, hydrology. Dendrochronological studies are conducted either on increment cores or on discs. It may be seen abnormalities on tree rings during the measurement like that false rings, missing rings, reaction wood. Like that situation, increment cores must be extracted from four different sides of each tree and be studied as more as on tree.

Practical analysis of specificity-determining residues in protein families.

Science.gov (United States)

Chagoyen, Mónica; García-Martín, Juan A; Pazos, Florencio

2016-03-01

Determining the residues that are important for the molecular activity of a protein is a topic of broad interest in biomedicine and biotechnology. This knowledge can help understanding the protein's molecular mechanism as well as to fine-tune its natural function eventually with biotechnological or therapeutic implications. Some of the protein residues are essential for the function common to all members of a family of proteins, while others explain the particular specificities of certain subfamilies (like binding on different substrates or cofactors and distinct binding affinities). Owing to the difficulty in experimentally determining them, a number of computational methods were developed to detect these functional residues, generally known as 'specificity-determining positions' (or SDPs), from a collection of homologous protein sequences. These methods are mature enough for being routinely used by molecular biologists in directing experiments aimed at getting insight into the functional specificity of a family of proteins and eventually modifying it. In this review, we summarize some of the recent discoveries achieved through SDP computational identification in a number of relevant protein families, as well as the main approaches and software tools available to perform this type of analysis. © The Author 2015. Published by Oxford University Press. For Permissions, please email: journals.permissions@oup.com.

Carbon utilization by fruit limits shoot growth in alternate-bearing citrus trees.

Science.gov (United States)

Martínez-Alcántara, Belén; Iglesias, Domingo J; Reig, Carmina; Mesejo, Carlos; Agustí, Manuel; Primo-Millo, Eduardo

2015-03-15

Fruit load in alternate-bearing citrus trees is reported to alter shoot number and growth during spring, summer, and autumn flushes, and the source-sink balance, which affects the storage and mobilization of reserve nutrients. The aim of this work was to assess the extent of shoot growth inhibition resulting from the presence of fruits in 'Moncada' mandarin trees loaded with fruit (ON) or with very light fruit load (OFF), and to identify the role of carbohydrates and nitrogenous compounds in the competition between fruits and shoots. Growth of reproductive and vegetative organs was measured on a monthly basis. (13)C- and (15)N-labeled compounds were supplied to trace the allocation of reserve nutrients and subsequent translocation from source to sink. At the end of the year, OFF trees produced more abundant flushes (2.4- and 4.9-fold higher in number and biomass, respectively) than ON trees. Fruits from ON trees accumulated higher C amounts at the expense of developing flushes, whereas OFF trees exhibited the opposite pattern. An inverse relationship was identified between the amount of C utilized by fruits and vegetative flush growth. (13)C-labeling revealed an important role for mature leaves of fruit-bearing branches in supporting shoot/fruit growth, and the elevated sink strength of growing fruits on shoots. N availability for vegetative shoots was not affected by the presence or absence of fruits, which accumulated important amounts of (15)N. In conclusion, our results show that shoot growth is resource-limited as a consequence of fruit development, and vegetative-growth inhibition is caused by photoassimilate limitation. The competence for N is not a decisive factor in limiting vegetative growth under the experimental conditions of this study. Copyright © 2014 Elsevier GmbH. All rights reserved.

Relationships between nutrient composition of flowers and fruit quality in orange trees grown in calcareous soil.

Science.gov (United States)

Pestana, Maribela; Beja, Pedro; Correia, Pedro José; de Varennes, Amarilis; Faria, Eugénio Araújo

2005-06-01

To determine if flower nutrient composition can be used to predict fruit quality, a field experiment was conducted over three seasons (1996-1999) in a commercial orange orchard (Citrus sinensis (L.) Osbeck cv. 'Valencia Late', budded on Troyer citrange rootstock) established on a calcareous soil in southern Portugal. Flowers were collected from 20 trees during full bloom in April and their nutrient composition determined, and fruits were harvested the following March and their quality evaluated. Patterns of covariation in flower nutrient concentrations and in fruit quality variables were evaluated by principal component analysis. Regression models relating fruit quality variables to flower nutrient composition were developed by stepwise selection procedures. The predictive power of the regression models was evaluated with an independent data set. Nutrient composition of flowers at full bloom could be used to predict the fruit quality variables fresh fruit mass and maturation index in the following year. Magnesium, Ca and Zn concentrations measured in flowers were related to fruit fresh mass estimations and N, P, Mg and Fe concentrations were related to fruit maturation index. We also established reference values for the nutrient composition of flowers based on measurements made in trees that produced large (> 76 mm in diameter) fruit.

Maturity Models Development in IS Research

DEFF Research Database (Denmark)

Lasrado, Lester Allan; Vatrapu, Ravi; Andersen, Kim Normann

2015-01-01

Maturity models are widespread in IS research and in particular, IT practitioner communities. However, theoretically sound, methodologically rigorous and empirically validated maturity models are quite rare. This literature review paper focuses on the challenges faced during the development...... literature reveals that researchers have primarily focused on developing new maturity models pertaining to domain-specific problems and/or new enterprise technologies. We find rampant re-use of the design structure of widely adopted models such as Nolan’s Stage of Growth Model, Crosby’s Grid, and Capability...... Maturity Model (CMM). Only recently have there been some research efforts to standardize maturity model development. We also identify three dominant views of maturity models and provide guidelines for various approaches of constructing maturity models with a standard vocabulary. We finally propose using...

Visualizing Individual Tree Differences in Tree-Ring Studies

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Mario Trouillier

2018-04-01

Full Text Available Averaging tree-ring measurements from multiple individuals is one of the most common procedures in dendrochronology. It serves to filter out noise from individual differences between trees, such as competition, height, and micro-site effects, which ideally results in a site chronology sensitive to regional scale factors such as climate. However, the climate sensitivity of individual trees can be modulated by factors like competition, height, and nitrogen deposition, calling attention to whether average chronologies adequately assess climatic growth-control. In this study, we demonstrate four simple but effective methods to visually assess differences between individual trees. Using individual tree climate-correlations we: (1 employed jitter plots with superimposed metadata to assess potential causes for these differences; (2 plotted the frequency distributions of climate correlations over time as heat maps; (3 mapped the spatial distribution of climate sensitivity over time to assess spatio-temporal dynamics; and (4 used t-distributed Stochastic Neighborhood Embedding (t-SNE to assess which trees were generally more similar in terms of their tree-ring pattern and their correlation with climate variables. This suite of exploratory methods can indicate if individuals in tree-ring datasets respond differently to climate variability, and therefore, should not solely be explored with climate correlations of the mean population chronology.

Residual densities affect growth of overstory trees and planted Douglas-fir, western hemlock, and western redcedar: results from the first decade

Science.gov (United States)

Leslie Chandler Brodie; Dean S. DeBell

2013-01-01

In recent years, interest has increased in silvicultural systems and harvest cuts that retain partial overstories, but there are few data available on the growth of the understory trees in such stands. We studied the response of overstory trees and underplanted seedlings, Douglas-fir (Pseudotsuga menziesii), western hemlock (Tsuga...

Changes in olive oil volatile organic compounds induced by water status and light environment in canopies of Olea europaea L. trees.

Science.gov (United States)

Benelli, Giovanni; Caruso, Giovanni; Giunti, Giulia; Cuzzola, Angela; Saba, Alessandro; Raffaelli, Andrea; Gucci, Riccardo

2015-09-01

Light and water are major factors in fruit development and quality. In this study, the effect of water and light in Olea europaea trees on volatile organic compounds (VOCs) in olive oil was studied over 2 years. Mature fruits were harvested from three zones of the canopy with different light exposure (64%, 42% and 30% of incident light) of trees subjected to full, deficit or complementary irrigation. VOCs were determined by SPME GC-MS and analysed by principal component analysis followed by discriminant analysis to partition treatment effects. Fruit fresh weight and mesocarp oil content decreased in zones where intercepted light was less. Low light levels significantly slowed down fruit maturation, whereas conditions of water deficit accelerated the maturation process. The presence of cyclosativene and α-muurulene was associated with water deficit, nonanal, valencene with full irrigation; α-muurulene, (E)-2-hexanal were related to low light conditions, while trans-β-ocimene, α-copaene, (Z)-2-penten-1-ol, hexanal and nonanal to well exposed zones. The year strongly affected the VOC profile of olive oil. This is the first report on qualitative changes in VOCs induced by light environment and/or water status. This information is valuable to better understand the role of environmental factors on the sensory quality of virgin olive oil. © 2014 Society of Chemical Industry.

Analysis Method for Pesticides Residues by GC/MS in Lebanese Apple

International Nuclear Information System (INIS)

Jaber, F.; Al Iskandarani, M.

2008-01-01

The apple's crop can be affected by many pests during the growing season, which requires careful monitoring. Both apple fruit and apple tree need to be treated by pesticides in order to protect them from pests. Such treatment often leads to the accumulation of stable pesticides inside the fruit. The local market provides a large variety of pesticides allowing farmers to use more than one active substance in order to protect their crop, often without proper advice. Monitoring pesticides on apples and other agricultural crops is the best way to protect consumers health from the hazards of pesticides residues. The development of new, rapid and effective method to analyze the multi pesticides residues at trace levels in apple samples is essential. This work describes the extraction procedure and the analytical method developed to detect the pesticide residues using the gas-chromatographic-mass spectrometric approach (GC-MS). The developed method was successfully applied to analyze apple samples collected from different Lebanese markets for a one year period in order to monitor the presence of pesticides and their stability in apple fruits during storage. (author)

Residual nilpotence and residual solubility of groups

International Nuclear Information System (INIS)

Mikhailov, R V

2005-01-01

The properties of the residual nilpotence and the residual solubility of groups are studied. The main objects under investigation are the class of residually nilpotent groups such that each central extension of these groups is also residually nilpotent and the class of residually soluble groups such that each Abelian extension of these groups is residually soluble. Various examples of groups not belonging to these classes are constructed by homological methods and methods of the theory of modules over group rings. Several applications of the theory under consideration are presented and problems concerning the residual nilpotence of one-relator groups are considered.

Modeling non-maturing liabilities

OpenAIRE

von Feilitzen, Helena

2011-01-01

Non‐maturing liabilities, such as savings accounts, lack both predetermined maturity and reset dates due to the fact that the depositor is free to withdraw funds at any time and that the depository institution is free to change the rate. These attributes complicate the risk management of such products and no standardized solution exists. The problem is important however since non‐maturing liabilities typically make up a considerable part of the funding of a bank. In this report different mode...

Seasonality of nutrients in leaves and fruits of apple trees

Directory of Open Access Journals (Sweden)

Nachtigall Gilmar Ribeiro

2006-01-01

Full Text Available The nutrient accumulation curves of apple trees are good indicators of plant nutrient demand for each developmental stage. They are also a useful tool to evaluate orchard nutritional status and to estimate the amount of soil nutrient removal. This research aimed at evaluating the seasonality of nutrients in commercial apple orchards during the agricultural years of 1999, 2000, and 2001. Therefore, apple tree leaves and fruits of three cultivars 'Gala', 'Golden Delicious' and 'Fuji' were weekly collected and evaluated for fresh and dry matter, fruit diameter and macronutrient (N, P, K, Ca and Mg and micronutrient (B, Cu, Fe, Mn, and Zn concentrations. Leaf and fruit sampling started one or two weeks after full bloom, depending on the cultivar, and ended at fruit harvest or four weeks later (in the case of leaf sampling. In general, leaf concentrations of N, P, K, Cu, and B decreased; Ca increased; and Mg, Fe, Mn, and Zn did vary significantly along the plant vegetative cycle. In fruits, the initial nutrient concentrations decreased quickly, undergoing slow and continuous decreases and then remaining almost constant until the end of fruit maturation, indicating nutrient dilution, once the total nutrient accumulation increased gradually with fruit growth. Potassium was the nutrient present in highest quantities in apple tree fruits and thus, the most removed from the soil.

Fault tree handbook

International Nuclear Information System (INIS)

Haasl, D.F.; Roberts, N.H.; Vesely, W.E.; Goldberg, F.F.

1981-01-01

This handbook describes a methodology for reliability analysis of complex systems such as those which comprise the engineered safety features of nuclear power generating stations. After an initial overview of the available system analysis approaches, the handbook focuses on a description of the deductive method known as fault tree analysis. The following aspects of fault tree analysis are covered: basic concepts for fault tree analysis; basic elements of a fault tree; fault tree construction; probability, statistics, and Boolean algebra for the fault tree analyst; qualitative and quantitative fault tree evaluation techniques; and computer codes for fault tree evaluation. Also discussed are several example problems illustrating the basic concepts of fault tree construction and evaluation

Cycling of fertilizer and cotton crop residue nitrogen

International Nuclear Information System (INIS)

Rochester, I.J.; Constable, G.A.; MacLeod, D.A.

1993-01-01

Mineral nitrogen (N), nitrate and ammonium contents were monitored in N-fertilized soils supporting cotton crops to provide information on the nitrification, mineralization and immobilization processes operating in the soil. The relative contributions of fertilizer N, previous cotton crop residue N and indigenous soil N to the mineral N pools and to the current crop's N uptake were calculated. After N fertilizer (urea) application, the soil's mineral N content rose rapidly and subsequently declined at a slower rate. The recovery of 15 N-labelled urea as mineral N declined exponentially with time. Biological immobilization (and possibly denitrification to some extent) were believed to be the major processes reducing post-application soil mineral N content. Progressively less N was mineralized upon incubation of soil sampled through the growing season. Little soil N (either from urea or crop residue) was mineralized at crop maturity. Cycling of N was evident between the soil mineral and organic N pools throughout the cotton growing season. Considerable quantities of fertilizer N were immobilized by the soil micro biomass; immobilized N was remineralized and subsequently taken up by the cotton crop. A large proportion of the crop N was taken up in the latter part of the season when the soil mineral N content was low. It is suggested that much of the N taken up by cotton was derived from microbial sources, rather than crop residues. The application of cotton crop residue (stubble) slightly reduced the mineral N content in the soil by encouraging biological immobilization. 15 N was mineralized very slowly from the labelled crop residue and did not contribute significantly to the supply of N to the current crop. Recovery of labelled fertilizer N and labelled crop residue N by the cotton crop was 28% and 1%, respectively. In comparison, the apparent recovery of fertilizer N was 48%. Indigenous soil N contributed 68% of the N taken up by the cotton crop. 33 refs., 1 tab

ELEVATED CO{sub 2} IN A PROTOTYPE FREE-AIR CO{sub 2} ENRICHMENT FACILITY AFFECTS PHOTOSYNTHETIC NITROGEN RELATIONS IN A MATURING PINE FOREST

Energy Technology Data Exchange (ETDEWEB)

ELLSWORTH,D.S.; LA ROCHE,J.; HENDREY,G.R.

1998-03-01

A maturing loblolly pine (Pinus taeda L.) forest was exposed to elevated CO{sub 2} in the natural environment in a perturbation study conducted over three seasons using the free-air CO{sub 2} enrichment (FACE) technique. At the time measurements were begun in this study, the pine canopy was comprised entirely of foliage which had developed under elevated CO{sub 2} conditions (atmospheric [CO{sub 2}] {approx} 550 {micro}mol mol{sup {minus}1}). Measurements of leaf photosynthetic responses to CO{sub 2} were taken to examine the effects of elevated CO{sub 2} on photosynthetic N nutrition in a pine canopy under elevated CO{sub 2}. Photosynthetic CO{sub 2} response curves (A-c{sub i} curves) were similar in FACE trees under elevated CO{sub 2} compared with counterpart trees in ambient plots for the first foliage cohort produced in the second season of CO{sub 2} exposure, with changes in curve form detected in the foliage cohorts subsequently produced under elevated CO{sub 2}. Differences in the functional relationship between carboxylation rate and N{sub a} suggest that for a given N{sub a} allocated among successive cohorts of foliage in the upper canopy, V{sub c max} was 17% lower in FACE versus Ambient trees. The authors also found that foliar Rubisco content per unit total protein derived from Western blot analysis was lower in late-season foliage in FACE foliage compared with ambient-grown foliage. The results illustrate a potentially important mode of physiological adjustment to growth conditions that may operate in forest canopies. Their findings suggest that mature loblolly pine trees growing in the field may have the capacity for shifts in intrinsic nitrogen utilization for photosynthesis under elevated CO{sub 2} that are not dependent on changes in leaf N. While carboxylation efficiency per unit N apparently decreased under elevated CO{sub 2}, photosynthetic rates in trees at elevated CO{sub 2} concentrations {approx} 550 pmol mol{sub {minus}1} are still

Role of protein haptenation in triggering maturation events in the dendritic cell surrogate cell line THP-1

International Nuclear Information System (INIS)

Megherbi, Rym; Kiorpelidou, Evanthia; Foster, Brian; Rowe, Cliff; Naisbitt, Dean J.; Goldring, Christopher E.; Park, B. Kevin

2009-01-01

Dendritic cell (DC) maturation in response to contact sensitizers is a crucial step in the induction of sensitization reactions; however the underlying mechanism of activation remains unknown. To test whether the extent of protein haptenation is a determinant in DC maturation, we tested the effect of five dinitrophenyl (DNP) analogues of different reactivity, on maturation markers in the cell line, THP-1. The potencies of the test compounds in upregulating CD54 levels, inducing IL-8 release and triggering p38 MAPK phosphorylation did not correlate with their ability to deplete intracellular glutathione (GSH) levels or cause cell toxicity. However, the compounds' potency at inducing p38 phosphorylation was significantly associated with the amount of intracellular protein adducts formed (p < 0.05). Inhibition experiments show that, at least for DNFB, p38 MAP kinase signalling controls compound-specific changes in CD54 expression and IL-8 release. 2D-PAGE analysis revealed that all the DNP analogues appeared to bind similar proteins. The analogues failed to activate NFkB, however, they activated Nrf2, which was used as a marker of oxidative stress. Neither GSH depletion, by use of buthionine sulfoximine, nor treatment with the strongly lysine-reactive hapten penicillin elicited maturation. We conclude that protein haptenation, probably through reactive cysteine residues may be a trigger for maturation events in this in vitro model and that p38 activation may be a discriminatory marker for the classification of potency of chemical sensitizers.

Role of protein haptenation in triggering maturation events in the dendritic cell surrogate cell line THP-1.

Science.gov (United States)

Megherbi, Rym; Kiorpelidou, Evanthia; Foster, Brian; Rowe, Cliff; Naisbitt, Dean J; Goldring, Christopher E; Park, B Kevin

2009-07-15

Dendritic cell (DC) maturation in response to contact sensitizers is a crucial step in the induction of sensitization reactions; however the underlying mechanism of activation remains unknown. To test whether the extent of protein haptenation is a determinant in DC maturation, we tested the effect of five dinitrophenyl (DNP) analogues of different reactivity, on maturation markers in the cell line, THP-1. The potencies of the test compounds in upregulating CD54 levels, inducing IL-8 release and triggering p38 MAPK phosphorylation did not correlate with their ability to deplete intracellular glutathione (GSH) levels or cause cell toxicity. However, the compounds' potency at inducing p38 phosphorylation was significantly associated with the amount of intracellular protein adducts formed (p<0.05). Inhibition experiments show that, at least for DNFB, p38 MAP kinase signalling controls compound-specific changes in CD54 expression and IL-8 release. 2D-PAGE analysis revealed that all the DNP analogues appeared to bind similar proteins. The analogues failed to activate NFkB, however, they activated Nrf2, which was used as a marker of oxidative stress. Neither GSH depletion, by use of buthionine sulfoximine, nor treatment with the strongly lysine-reactive hapten penicillin elicited maturation. We conclude that protein haptenation, probably through reactive cysteine residues may be a trigger for maturation events in this in vitro model and that p38 activation may be a discriminatory marker for the classification of potency of chemical sensitizers.

Slab replacement maturity guidelines.

Science.gov (United States)

2014-04-01

This study investigated the use of maturity method to determine early age strength of concrete in slab : replacement application. Specific objectives were (1) to evaluate effects of various factors on the compressive : maturity-strength relationship ...

Maturity effects in energy futures

Energy Technology Data Exchange (ETDEWEB)

Serletis, Apostolos (Calgary Univ., AB (CA). Dept. of Economics)

1992-04-01

This paper examines the effects of maturity on future price volatility and trading volume for 129 energy futures contracts recently traded in the NYMEX. The results provide support for the maturity effect hypothesis, that is, energy futures prices to become more volatile and trading volume increases as futures contracts approach maturity. (author).

Correlation between Cervical Vertebral Maturation Stages and Dental Maturation in a Saudi Sample

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Nayef H Felemban

2017-01-01

Full Text Available Background: The aim of the present study was to compare the cervical vertebra maturation stages method and dental maturity using tooth calcification stages. Methods: The current study comprised of 405 subjects selected from orthodontic patients of Saudi origin coming to clinics of the specialized dental centers in western region of Saudi Arabia. Dental age was assessed according to the developmental stages of upper and lower third molars and skeletal maturation according to the cervical vertebrae maturation stage method. Statistical analysis was done using Kruskal-Wallis H, Mann-Whitney U test, Chi-Square test; t-test and Spearman correlation coefficient for inter group comparison. Results: The females were younger than males in all cervical stages. The CS1-CS2 show the period before the peak of growth, during CS3-CS5 it’s the pubertal growth spurt and CS6 is the period after the peak of the growth. The mean age and standard deviation for cervical stages of CS2, CS3 and CS4 were 12.09 ±1.72 years, 13.19 ±1.62 and 14.88 ±1.52 respectively. The Spearman correlation coefficients between cervical vertebrae and dental maturation were between 0.166 and 0.612, 0.243 and 0.832 for both sexes for upper and lower third molars. The significance levels for all coefficients were equal at 0.01 and 0.05. Conclusion: The results of this study showed that the skeletal maturity increased with the increase in dental ages for both genders. An early rate of skeletal maturation stage was observed in females. This study needs further analysis using a larger sample covering the entire dentition.

Variation in content of macronutrients of guava tree leaves, in function of type and time of storage

Directory of Open Access Journals (Sweden)

Henrique Antunes de Souza

2010-10-01

Full Text Available Leaf analysis for perennial crops such as the guava tree is an important tool. It was used to evaluate the influence of the type of packaging (with or without refrigerator and storage time after collection on the macronutrient composition of guava tree leaves. The leaf sampling was carried out on a commercial guava tree (cv. Paluma, collecting the third pair of recently matured leaves in full bloom. The experimental design was in randomized blocks, subdivided according to the type of packaging (with or without refrigerator and further subdivided into eight storage times before washing (zero, 6, 12, 24, 48, 72, 96 and 168h after sampling, with four replications. The storage time significantly affected the concentration of leaf nitrogen, calcium and sulfur. Moreover, the type and time of conditioning (with or without refrigerator affected only the magnesium. In general, storage fot up to 12h before washing produced no significant changes in the levels of macronutrients.

Variation in content of macronutrients of guava tree leaves, in function of type and time of storage

Directory of Open Access Journals (Sweden)

Henrique Antunes de Souza

2010-09-01

Full Text Available Leaf analysis for perennial crops such as the guava tree is an important tool. It was used to evaluate the influence of the type of packaging (with or without refrigerator and storage time after collection on the macronutrient composition of guava tree leaves. The leaf sampling was carried out on a commercial guava tree (cv. Paluma, collecting the third pair of recently matured leaves in full bloom. The experimental design was in randomized blocks, subdivided according to the type of packaging (with or without refrigerator and further subdivided into eight storage times before washing (zero, 6, 12, 24, 48, 72, 96 and 168h after sampling, with four replications. The storage time significantly affected the concentration of leaf nitrogen, calcium and sulfur. Moreover, the type and time of conditioning (with or without refrigerator affected only the magnesium. In general, storage fot up to 12h before washing produced no significant changes in the levels of macronutrients.

Impacts on soils and residual trees from cut-to-length thinning operations in California's redwood forests

Science.gov (United States)

Kyungrok Hwang; Han-sup Han; Susan E. Marshall; Deborah S. Page-Dumroese

2017-01-01

Cut-to-length (CTL) harvest systems have recently been introduced for thinning third-growth, young (<25 years old) redwood forests (Sequoia sempervirens (Lamb. ex D. Don) Endl.) in northern California. This type of harvesting can effective for thinning overstocked stands consisting of small-diameter trees. However, forestland managers and government agencies...

Optimization Method of Fusing Model Tree into Partial Least Squares

Directory of Open Access Journals (Sweden)

Yu Fang

2017-01-01

Full Text Available Partial Least Square (PLS can’t adapt to the characteristics of the data of many fields due to its own features multiple independent variables, multi-dependent variables and non-linear. However, Model Tree (MT has a good adaptability to nonlinear function, which is made up of many multiple linear segments. Based on this, a new method combining PLS and MT to analysis and predict the data is proposed, which build MT through the main ingredient and the explanatory variables(the dependent variable extracted from PLS, and extract residual information constantly to build Model Tree until well-pleased accuracy condition is satisfied. Using the data of the maxingshigan decoction of the monarch drug to treat the asthma or cough and two sample sets in the UCI Machine Learning Repository, the experimental results show that, the ability of explanation and predicting get improved in the new method.

Extraction, separation, and detections of 14C-diazepam and 14C-metabolites from brain tissue of mature and old rats

International Nuclear Information System (INIS)

Komiskey, H.L.; Rahman, A.; Weisenburger, W.P.; Hayton, W.L.; Zobrist, R.H.; Silvius, W.

1985-01-01

A rapid method for simultaneous determination of brain concentrations of diazepan and each of its three major metabolites in brain tissue by a reverse isotope dilution procedure is presented. Radiolabeled diazepam and metabolites were extracted from brain tissue of mature and senescent rats with ethyl ether. After the ether was evaporated the benzodiazepines were separated from the residue by passing the water soluble portion through C-18 bonded-phase extraction columns. High pressure liquid chromatography (HPLC) was used to separate the benzodiazepines from each other. Reverse isotope dilution analysis was used to quantify diazepam and its metabolites. The percent recovery of diazepam and its metabolites from the brain of mature or senescent rats did not vary significantly

Maturity models in supply chain sustainability

DEFF Research Database (Denmark)

Correia, Elisabete; Carvalho, Helena; Azevedo, Susana G.

2017-01-01

A systematic literature review of supply chain maturity models with sustainability concerns is presented. The objective is to give insights into methodological issues related to maturity models, namely the research objectives; the research methods used to develop, validate and test them; the scope...... of maturity levels. The comprehensive review, analysis, and synthesis of the maturity model literature represent an important contribution to the organization of this research area, making possible to clarify some confusion that exists about concepts, approaches and components of maturity models...

Steam explosion treatment for ethanol production from branches pruned from pear trees by simultaneous saccharification and fermentation.

Science.gov (United States)

Sasaki, Chizuru; Okumura, Ryosuke; Asada, Chikako; Nakamura, Yoshitoshi

2014-01-01

This study investigated the production of ethanol from unutilized branches pruned from pear trees by steam explosion pretreatment. Steam pressures of 25, 35, and 45 atm were applied for 5 min, followed by enzymatic saccharification of the extracted residues with cellulase (Cellic CTec2). High glucose recoveries, of 93.3, 99.7, and 87.1%, of the total sugar derived from the cellulose were obtained from water- and methanol-extracted residues after steam explosion at 25, 35, and 45 tm, respectively. These values corresponded to 34.9, 34.3, and 27.1 g of glucose per 100 g of dry steam-exploded branches. Simultaneous saccharification and fermentation experiments were done on water-extracted residues and water- and methanol-extracted residues by Kluyveromyces marxianus NBRC 1777. An overall highest theoretical ethanol yield of 76% of the total sugar derived from cellulose was achieved when 100 g/L of water- and methanol-washed residues from 35 atm-exploded pear branches was used as substrate.

Residual tree damage during selection cuts using two skidding systems in the Missouri Ozarks

Science.gov (United States)

Robert L. Ficklin; John P. Dwyer; Bruce E. Cutter; Tom Draper

1997-01-01

Today, there is an interest in using alternative silvicultural systems like selection and two-aged management, because the public finds these systems more acceptable than clearcutting. However, repeated entries into forest stands to remove timber increase the risk of residual stand damage. Harvest techniques are desirable that (1) reduce the risk of stand damage and (2...

Modular tree automata

DEFF Research Database (Denmark)

Bahr, Patrick

2012-01-01

Tree automata are traditionally used to study properties of tree languages and tree transformations. In this paper, we consider tree automata as the basis for modular and extensible recursion schemes. We show, using well-known techniques, how to derive from standard tree automata highly modular...

Rate of tree carbon accumulation increases continuously with tree size.

Science.gov (United States)

Stephenson, N L; Das, A J; Condit, R; Russo, S E; Baker, P J; Beckman, N G; Coomes, D A; Lines, E R; Morris, W K; Rüger, N; Alvarez, E; Blundo, C; Bunyavejchewin, S; Chuyong, G; Davies, S J; Duque, A; Ewango, C N; Flores, O; Franklin, J F; Grau, H R; Hao, Z; Harmon, M E; Hubbell, S P; Kenfack, D; Lin, Y; Makana, J-R; Malizia, A; Malizia, L R; Pabst, R J; Pongpattananurak, N; Su, S-H; Sun, I-F; Tan, S; Thomas, D; van Mantgem, P J; Wang, X; Wiser, S K; Zavala, M A

2014-03-06

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle--particularly net primary productivity and carbon storage--increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree's total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to undertand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

Traffic pollution affects tree-ring width and isotopic composition of Pinus pinea

International Nuclear Information System (INIS)

Battipaglia, Giovanna; Marzaioli, Fabio; Lubritto, Carmine; Altieri, Simona; Strumia, Sandro; Cherubini, Paolo; Cotrufo, M. Francesca

2010-01-01

This study presents new evidence that radiocarbon, combined with dendrochronological and stable isotopes analysis in tree rings and needles, can help to better understand the influence of pollution on trees. Pinus pinea individuals, adjacent to main roads in the urban area of Caserta (South Italy) and exposed to large amounts of traffic exhaust since 1980, were sampled and the time-related trend in the growth residuals was estimated. We found a consistent decrease in the ring width starting from 1980, with a slight increase in δ 13 C value, which was considered to be a consequence of environmental stress. No clear pattern was identified in δ 15 N, while an increasing effect of the fossil fuel dilution on the atmospheric bomb-enriched 14 C background was detected in tree rings, possibly as a consequence of the increase in traffic exhausts. Our findings suggested that radiocarbon is a very sensitive tool to investigate small-scale (i.e. traffic exhaust at the level crossing) and large-scale (urban area pollution) induced disturbances.

Traffic pollution affects tree-ring width and isotopic composition of Pinus pinea

Energy Technology Data Exchange (ETDEWEB)

Battipaglia, Giovanna, E-mail: giovanna.battipaglia@wsl.ch [WSL Swiss Federal Institute for Forest, Snow and Landscape Research, CH-8903 Birmensdorf (Switzerland); Department of Environmental Sciences, Second University of Naples, Via Vivaldi 43, I-81100 Caserta (Italy); Marzaioli, Fabio; Lubritto, Carmine; Altieri, Simona; Strumia, Sandro [Department of Environmental Sciences, Second University of Naples, Via Vivaldi 43, I-81100 Caserta (Italy); Cherubini, Paolo [WSL Swiss Federal Institute for Forest, Snow and Landscape Research, CH-8903 Birmensdorf (Switzerland); Cotrufo, M. Francesca [Department of Environmental Sciences, Second University of Naples, Via Vivaldi 43, I-81100 Caserta (Italy); Department of Soil and Crop Sciences, Colorado State University, CO (United States)

2010-01-01

This study presents new evidence that radiocarbon, combined with dendrochronological and stable isotopes analysis in tree rings and needles, can help to better understand the influence of pollution on trees. Pinus pinea individuals, adjacent to main roads in the urban area of Caserta (South Italy) and exposed to large amounts of traffic exhaust since 1980, were sampled and the time-related trend in the growth residuals was estimated. We found a consistent decrease in the ring width starting from 1980, with a slight increase in {delta}{sup 13}C value, which was considered to be a consequence of environmental stress. No clear pattern was identified in {delta}{sup 15}N, while an increasing effect of the fossil fuel dilution on the atmospheric bomb-enriched {sup 14}C background was detected in tree rings, possibly as a consequence of the increase in traffic exhausts. Our findings suggested that radiocarbon is a very sensitive tool to investigate small-scale (i.e. traffic exhaust at the level crossing) and large-scale (urban area pollution) induced disturbances.

Plasticity in gas-exchange physiology of mature Scots pine and European larch drive short- and long-term adjustments to changes in water availability.

Science.gov (United States)

Feichtinger, Linda M; Siegwolf, Rolf T W; Gessler, Arthur; Buchmann, Nina; Lévesque, Mathieu; Rigling, Andreas

2017-09-01

Adjustment mechanisms of trees to changes in soil-water availability over long periods are poorly understood, but crucial to improve estimates of forest development in a changing climate. We compared mature trees of Scots pine (Pinus sylvestris) and European larch (Larix decidua) growing along water-permeable channels (irrigated) and under natural conditions (control) at three sites in inner-Alpine dry valleys. At two sites, the irrigation had been stopped in the 1980s. We combined measurements of basal area increment (BAI), tree height and gas-exchange physiology (Δ 13 C) for the period 1970-2009. At one site, the Δ 13 C of irrigated pine trees was higher than that of the control in all years, while at the other sites, it differed in pine and larch only in years with dry climatic conditions. During the first decade after the sudden change in water availability, the BAI and Δ 13 C of originally irrigated pine and larch trees decreased instantly, but subsequently reached higher levels than those of the control by 2009 (15 years afterwards). We found a high plasticity in the gas-exchange physiology of pine and larch and site-specific responses to changes in water availability. Our study highlights the ability of trees to adjust to new conditions, thus showing high resilience. © 2017 John Wiley & Sons Ltd.

Carotenoid composition of strawberry tree (Arbutus unedo L.) fruits.

Science.gov (United States)

Delgado-Pelayo, Raúl; Gallardo-Guerrero, Lourdes; Hornero-Méndez, Dámaso

2016-05-15

The carotenoid composition of strawberry tree (Arbutus unedo) fruits has been characterised in detail and quantified for the first time. According to the total carotenoid content (over 340 μg/g dw), mature strawberry tree berries can be classified as fruits with very high carotenoid content (>20 μg/g dw). (all-E)-Violaxanthin and 9Z-violaxanthin were found to be the major carotenoid pigments, accounting for more than 60%, responsible for the bright colour of the flesh of ripe fruits. In addition other 5,6-epoxide carotenoids, such as (all-E)-neoxanthin, (9'Z)-neoxanthin (all-E)-antheraxanthin and lutein 5,6-epoxide, together with (all-E)-lutein, (all-E)-zeaxanthin and (all-E)-β-carotene were found at high levels (>5-20 μg/g dw). The LC-MS (APCI+) analysis of the xanthophyll fraction in their native state (direct extract) revealed that most of them (>90%) were totally esterified with saturated fatty acids (capric, lauric, myristic, palmitic and stearic). Monoesters, homodiesters and heterodiesters of (all-E)-violaxanthin and 9Z-violaxanthin were the major pigments. Copyright © 2015 Elsevier Ltd. All rights reserved.

Identification, Functional Study, and Promoter Analysis of HbMFT1, a Homolog of MFT from Rubber Tree (Hevea brasiliensis

Directory of Open Access Journals (Sweden)

Zhenghong Bi

2016-03-01

Full Text Available A homolog of MOTHER OF FT AND TFL1 (MFT was isolated from Hevea brasiliensis and its biological function was investigated. Protein multiple sequence alignment and phylogenetic analysis revealed that HbMFT1 conserved critical amino acid residues to distinguish MFT, FLOWERING LOCUS T (FT and TERMINAL FLOWER1 (TFL1-like proteins and showed a closer genetic relationship to the MFT-like group. The accumulation of HbMFT1 was generally detected in various tissues except pericarps, with the highest expression in embryos and relatively higher expression in roots and stems of seedlings, flowering inflorescences, and male and female flowers. HbMFT1 putative promoter analysis showed that tissue-specific, environmental change responsive and hormone-signaling responsive elements were generally present. HbMFT1 was strongly induced under a short-day condition at 28 °C, with the highest expression after the onset of a day. Overexpression of HbMFT1 inhibited seed germination, seedling growth, and flowering in transgenic Arabidopsis. The qRT-PCR further confirmed that APETALA1 (AP1 and FRUITFULL (FUL were drastically down-regulated in 35S::HbMFT1 plants. A histochemical β-glucuronidase (GUS assay showed that HbMFT1::GUS activity was mainly detected in stamens and mature seeds coinciding with its original expression and notably induced in rosette leaves and seedlings of transgenic Arabidopsis by exogenous abscisic acid (ABA due to the presence of ABA cis-elements in HbMFT1 promoter. These results suggested that HbMFT1 was mainly involved in maintenance of seed maturation and stamen development, but negatively controlled germination, growth and development of seedlings and flowering. In addition, the HbMFT1 promoter can be utilized in controlling transgene expression in stamens and seeds of rubber tree or other plant species.

The SecA2 pathway of Mycobacterium tuberculosis exports effectors that work in concert to arrest phagosome and autophagosome maturation.

Science.gov (United States)

Zulauf, Katelyn E; Sullivan, Jonathan Tabb; Braunstein, Miriam

2018-04-30

To subvert host defenses, Mycobacterium tuberculosis (Mtb) avoids being delivered to degradative phagolysosomes in macrophages by arresting the normal host process of phagosome maturation. Phagosome maturation arrest by Mtb involves multiple effectors and much remains unknown about this important aspect of Mtb pathogenesis. The SecA2 dependent protein export system is required for phagosome maturation arrest and consequently growth of Mtb in macrophages. To better understand the role of the SecA2 pathway in phagosome maturation arrest, we identified two effectors exported by SecA2 that contribute to this process: the phosphatase SapM and the kinase PknG. Then, utilizing the secA2 mutant of Mtb as a platform to study effector functions, we identified specific steps in phagosome maturation inhibited by SapM and/or PknG. By identifying a histidine residue that is essential for SapM phosphatase activity, we confirmed for the first time that the phosphatase activity of SapM is required for its effects on phagosome maturation in macrophages. We further demonstrated that SecA2 export of SapM and PknG contributes to the ability of Mtb to replicate in macrophages. Finally, we extended our understanding of the SecA2 pathway, SapM, and PknG by revealing that their contribution goes beyond preventing Mtb delivery to mature phagolysosomes and includes inhibiting Mtb delivery to autophagolysosomes. Together, our results revealed SapM and PknG to be two effectors exported by the SecA2 pathway of Mtb with distinct as well as cumulative effects on phagosome and autophagosome maturation. Our results further reveal that Mtb must have additional mechanisms of limiting acidification of the phagosome, beyond inhibiting recruitment of the V-ATPase proton pump to the phagosome, and they indicate differences between effects of Mtb on phagosome and autophagosome maturation.

Reproductivity and phenology of argan (argania spinosa (L.) skeels) a rare tree endemic to the west of algeria

International Nuclear Information System (INIS)

Benaouf, Z.; Arabi, Z.; Miloudi, A.; Souidi, Z.

2015-01-01

Argania spinosa in its ecological interest is threefold: forest, forage and fruit (oil production). The regeneration of the argan tree, it is important to know the phenology of this species. The study of phenology helps to know precisely the periods of activity of vegetation for productivity measures (Embryogenesis of the pollen grain, pollen deposition, pollen adhesion, fluorescence microscopy of pollen tube growth and Pollen grain size). Our results on the study of the phenology of two taxa of Argania spinosa (Mascara taxa and Mostaganem taxa), Regarding the phenological behavior of the argan under the effect of environmental conditions, we can mention that some argan trees (of Oggaz and one of Stidia) are early trees bloom twice a year in October and in spring, the author trees are late trees manifest activity during periods of the year. Begin to bloom from February until spring, this period is characterized by the breakdown of flower buds and the appearance of flowers on the twigs of the previous year and those of the current year; the fall of their ripe fruit takes place in Jun of the following year. Argan trees wore two generations of fruit, fruit knotted this season and last season tied fruit maturing. The length of the cycle is detected 9 and 16 months, we believe that a time synchronization in the evolution of physiological behavior argan trees of the two stations with 90 percentage. (author)

[Research on identification of species of fruit trees by spectral analysis].

Science.gov (United States)

Xing, Dong-Xing; Chang, Qing-Rui

2009-07-01

Using the spectral reflectance data (R2) of canopies, the present paper identifies seven species of fruit trees bearing fruit in the fruit mature period. Firstly, it compares the fruit tree species identification capability of six kinds of satellite sensors and four kinds of vegetation index through re-sampling the spectral data with six kinds of pre-defined filter function and the related data processing of calculating vegetation indexes. Then, it structures a BP neural network model for identifying seven species of fruit trees on the basis of choosing the best transformation of R(lambda) and optimizing the model parameters. The main conclusions are: (1) the order of the identification capability of the six kinds of satellite sensors from strong to weak is: MODIS, ASTER, ETM+, HRG, QUICKBIRD and IKONOS; (2) among the four kinds of vegetation indexes, the identification capability of RVI is the most powerful, the next is NDVI, while the identification capability of SAVI or DVI is relatively weak; (3) The identification capability of RVI and NDVI calculated with the reflectance of near-infrared and red channels of ETM+ or MODIS sensor is relatively powerful; (4) Among R(lambda) and its 22 kinds of transformation data, d1 [log(1/R(lambda))](derivative gap is set 9 nm) is the best transformation for structuring BP neural network model; (5) The paper structures a 3-layer BP neural network model for identifying seven species of fruit trees using the best transformation of R(lambda) which is d1 [log(1/R(lambda))](derivative gap is set 9 nm).

Assessment of High Rates of Precocious Male Maturation in a Spring Chinook Salmon Supplementation Hatchery Program, Annual Report 2002-2003.

Energy Technology Data Exchange (ETDEWEB)

Larsen, Donald; Beckman, Brian; Cooper, Kathleen

2003-08-01

The Yakima River Spring Chinook Salmon Supplementation Project in Washington State is currently one of the most ambitious efforts to enhance a natural salmon population in the United States. Over the past five years we have conducted research to characterize the developmental physiology of naturally- and hatchery-reared wild progeny spring chinook salmon (Oncorhynchus tshawytscha) in the Yakima River basin. Fish were sampled at the main hatchery in Cle Elum, at remote acclimation sites and, during smolt migration, at downstream dams. Throughout these studies the maturational state of all fish was characterized using combinations of visual and histological analysis of testes, gonadosomatic index (GSI), and measurement of plasma 11-ketotestosterone (11-KT). We established that a plasma 11-KT threshold of 0.8 ng/ml could be used to designate male fish as either immature or precociously maturing approximately 8 months prior to final maturation (1-2 months prior to release as 'smolts'). Our analyses revealed that 37-49% of the hatchery-reared males from this program undergo precocious maturation at 2 years of age and a proportion of these fish appear to residualize in the upper Yakima River basin throughout the summer. An unnaturally high incidence of precocious male maturation may result in loss of potential returning anadromous adults, skewing of female: male sex ratios, ecological, and genetic impacts on wild populations and other native species. Precocious male maturation is significantly influenced by growth rate at specific times of year and future studies will be conducted to alter maturation rates through seasonal growth rate manipulations.

A bijection between phylogenetic trees and plane oriented recursive trees

OpenAIRE

Prodinger, Helmut

2017-01-01

Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the respective representations a 2-partitions and trapezoidal words.

Fate and sublethal effects of isoproturon on mature earthworm (Lumbricus terrestris L.).

Science.gov (United States)

Mosleh, Y Y; Paris-Palacios, S; Couderchet, M; Vernet, G

2002-01-01

This study was conducted to investigate the effects of isoproturon in mature earthworm (Lumbricus terrestris L.) under laboratory condition. Earthworms were exposed to soils contaminated with different concentrations for various duration. Residues were monitored in soil and earthworms after 7, 15, 30, 45, and 60 days of exposure to different isoproturon concentrations. Acute toxicity of isoproturon was determined together with growth rate and total soluble protein content of worms. These parameters were related to isoproturon concentration in soil and earthworms. No lethal effect of isoproturon was observed even at the highest concentration tested (1.4 g/kg soil) after 60 days after treatment. Residues of isoproturon have caused a significant reduction of the growth rate. Additionally a reduction of total soluble protein was observed in all treated worms. Decrease of isoproturon concentration in soil was slow and depended on herbicide initial concentration. In the worms, it increased during the first 15 days and decreased thereafter. This study is suggesting the use of the growth rate of earthworms as biomarker of exposure to isoproturon.

Changes in the volatile compounds and in the chemical and physical properties of snake fruit (Salacca edulis Reinw) Cv. Pondoh during maturation.

Science.gov (United States)

Supriyadi; Suhardi; Suzuki, Masayuki; Yoshida, Koichi; Muto, Tokie; Fujita, Akira; Watanabe, Naoharu

2002-12-18

During the maturation of snake fruit (Salacca edulis Reinw) Pondoh, the contents of sucrose, glucose, fructose, and volatile compounds changed drastically. The glucose, fructose, and volatile compounds contents showed their maximum levels at the end of maturation; however, the sucrose content decreased. During maturation, the flesh firmness tended to increase; however, at the end of maturation (6 months), the flesh became soft. The major volatile aroma in solvent-assisted flavor evaporation (SAFE) and solvent extracts were identified to be methyl esters of butanoic acids, 2-methylbutanoic acids, hexanoic acids, pentanoic acids, and the corresponding carboxylic acids. Furaneol (4-hydroxy-2,5-dimethyl-3(2H)-furanone) was also identified as a minor aroma constituent in the SAFE residue. The methyl esters were found to increase dramatically during stages 4-6 (5-6 months after the pollination) to exceed the amounts of carboxylic acids, whereas the acid amount increased gradually until stage 5 (5.5 months after the pollination) to reach the maximum at stage 6 (6 months after the pollination).

Rate of tree carbon accumulation increases continuously with tree size

Science.gov (United States)

Stephenson, N.L.; Das, A.J.; Condit, R.; Russo, S.E.; Baker, P.J.; Beckman, N.G.; Coomes, D.A.; Lines, E.R.; Morris, W.K.; Rüger, N.; Álvarez, E.; Blundo, C.; Bunyavejchewin, S.; Chuyong, G.; Davies, S.J.; Duque, Á.; Ewango, C.N.; Flores, O.; Franklin, J.F.; Grau, H.R.; Hao, Z.; Harmon, M.E.; Hubbell, S.P.; Kenfack, D.; Lin, Y.; Makana, J.-R.; Malizia, A.; Malizia, L.R.; Pabst, R.J.; Pongpattananurak, N.; Su, S.-H.; Sun, I-F.; Tan, S.; Thomas, D.; van Mantgem, P.J.; Wang, X.; Wiser, S.K.; Zavala, M.A.

2014-01-01

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle—particularly net primary productivity and carbon storage - increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree’s total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to understand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

Managing Tree Diversity: A Comparison of Suburban Development in Two Canadian Cities

Directory of Open Access Journals (Sweden)

Sophie A. Nitoslawski

2016-05-01

Full Text Available Is (suburban forest diversity shaped by previous land use? This study was designed to quantitatively assess the impacts of subdivision development on urban tree-species composition in two Canadian cities: Halifax, Nova Scotia, and London, Ontario. The main goal was to determine whether cities with contrasting pre-urbanized or pre-settlement landscapes—woodlands in Halifax and agricultural fields in London—also revealed differences in urban tree diversity losses and/or gains due to urbanization. In each city, four residential neighbourhoods representing two age categories, older and newer (40–50 years, <15 years, were examined and trees on three land types were sampled: public (street, private (residential, and remnant (woodland. All public street trees within the chosen neighbourhoods were inventoried and approximately 10% of the residential property lots were sampled randomly. Plots were examined in remnant forests in or near each city, representing the original forest habitats prior to agricultural and/or urban landscape transformations. Diameter at breast height, species richness and evenness, and proportions of native and non-native trees were measured. In both cities, streetscapes in newer neighbourhoods exhibit greater species richness and evenness, and are characterized by substantially more native trees. Despite this trend, developers and home owners continue to intensively plant non-native species on newer and smaller property lots. Older neighbourhoods in Halifax containing remnant forest stands hold the greatest number of native trees on private property, alluding to the importance of residual forest buffers and patches in promoting naturalness in the private urban forest. These results suggest that identifying and quantifying flows of species between green spaces during and after development is valuable in order to effectively promote native species establishment and enhance overall urban forest diversity.

Six centuries of May-July precipitation in Cyprus from tree rings

Science.gov (United States)

Touchan, Ramzi; Christou, Andreas K.; Meko, David M.

2014-12-01

A May-July precipitation nested reconstruction for the period AD 1415-2010 was developed from multi-century tree-ring records of Pinus nigra, Pinus brutia, and Cedrus brevifolia for Cyprus. Calibration and verification statistics for the period 1917-2010 show a good level of skill, and split-sample validation over 1917-2010 supports temporal stability of the tree-ring signal for precipitation. Smoothed annual time series of reconstructed precipitation and a tally of drought events in a moving time window indicate that the calibration period is not representative of the full range of drought variability. While convective precipitation in the warm season may be driven strongly by local factors, composite maps of geopotential height anomaly for dry years and wet years support large-scale atmospheric-flow influence related to height anomalies over the broader region of northeast Africa and the eastern Mediterranean. Emerging positive trend in reconstruction residuals may be an early sign of exacerbation of drought stress on trees by recent warming in May-July. Future warming expected from increases in greenhouse gases poses a threat to forest resources in Cyprus and elsewhere in the Mediterranean.

IcyTree: rapid browser-based visualization for phylogenetic trees and networks.

Science.gov (United States)

Vaughan, Timothy G

2017-08-01

IcyTree is an easy-to-use application which can be used to visualize a wide variety of phylogenetic trees and networks. While numerous phylogenetic tree viewers exist already, IcyTree distinguishes itself by being a purely online tool, having a responsive user interface, supporting phylogenetic networks (ancestral recombination graphs in particular), and efficiently drawing trees that include information such as ancestral locations or trait values. IcyTree also provides intuitive panning and zooming utilities that make exploring large phylogenetic trees of many thousands of taxa feasible. IcyTree is a web application and can be accessed directly at http://tgvaughan.github.com/icytree . Currently supported web browsers include Mozilla Firefox and Google Chrome. IcyTree is written entirely in client-side JavaScript (no plugin required) and, once loaded, does not require network access to run. IcyTree is free software, and the source code is made available at http://github.com/tgvaughan/icytree under version 3 of the GNU General Public License. tgvaughan@gmail.com. © The Author(s) 2017. Published by Oxford University Press.

Maturity Models

DEFF Research Database (Denmark)

Lasrado, Lester Allan; Vatrapu, Ravi

2016-01-01

Recent advancements in set theory and readily available software have enabled social science researchers to bridge the variable-centered quantitative and case-based qualitative methodological paradigms in order to analyze multi-dimensional associations beyond the linearity assumptions, aggregate...... effects, unicausal reduction, and case specificity. Based on the developments in set theoretical thinking in social sciences and employing methods like Qualitative Comparative Analysis (QCA), Necessary Condition Analysis (NCA), and set visualization techniques, in this position paper, we propose...... and demonstrate a new approach to maturity models in the domain of Information Systems. This position paper describes the set-theoretical approach to maturity models, presents current results and outlines future research work....

Transformation of fruit trees. Useful breeding tool or continued future prospect?

Science.gov (United States)

Petri, César; Burgos, Lorenzo

2005-02-01

Regeneration and transformation systems using mature plant material of woody fruit species have to be achieved as a necessary requirement for the introduction of useful genes into specific cultivars and the rapid evaluation of resulting horticultural traits. Although the commercial production of transgenic annual crops is a reality, commercial genetically-engineered fruit trees are still far from common. In most woody fruit species, transformation and regeneration of commercial cultivars are not routine, generally being limited to a few genotypes or to seedlings. The future of genetic transformation as a tool for the breeding of fruit trees requires the development of genotype-independent procedures, based on the transformation of meristematic cells with high regeneration potential and/or the use of regeneration-promoting genes. The public concern with the introduction of antibiotic resistance into food and the restrictions due to new European laws that do not allow deliberate release of plants transformed with antibiotic-resistance genes highlight the development of methods that avoid the use of antibiotic-dependent selection or allow elimination of marker genesfrom the transformed plant as a research priority in coming years.

Effects of soil compaction on residual stand growth in central Appalachian hardwood forest: a preliminary case study

Science.gov (United States)

Jingxin Wang; Chris LeDoux; Michael Vanderberg; Li Yaoxiang

2006-01-01

A preliminary study that quantified the impacts of soil compaction on residual tree growth associated with ground-based skidding traffic intensity and turn payload size was investigated in the central Appalachian hardwood forest. The field study was carried out on a 20-acre tract of the West Virginia University Research Forest. Skid trails were laid out in 170' -...

TreeScaper: Visualizing and Extracting Phylogenetic Signal from Sets of Trees.

Science.gov (United States)

Huang, Wen; Zhou, Guifang; Marchand, Melissa; Ash, Jeremy R; Morris, David; Van Dooren, Paul; Brown, Jeremy M; Gallivan, Kyle A; Wilgenbusch, Jim C

2016-12-01

Modern phylogenomic analyses often result in large collections of phylogenetic trees representing uncertainty in individual gene trees, variation across genes, or both. Extracting phylogenetic signal from these tree sets can be challenging, as they are difficult to visualize, explore, and quantify. To overcome some of these challenges, we have developed TreeScaper, an application for tree set visualization as well as the identification of distinct phylogenetic signals. GUI and command-line versions of TreeScaper and a manual with tutorials can be downloaded from https://github.com/whuang08/TreeScaper/releases TreeScaper is distributed under the GNU General Public License. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Naturally Engineered Maturation of Cardiomyocytes

Directory of Open Access Journals (Sweden)

Gaetano J. Scuderi

2017-05-01

Full Text Available Ischemic heart disease remains one of the most prominent causes of mortalities worldwide with heart transplantation being the gold-standard treatment option. However, due to the major limitations associated with heart transplants, such as an inadequate supply and heart rejection, there remains a significant clinical need for a viable cardiac regenerative therapy to restore native myocardial function. Over the course of the previous several decades, researchers have made prominent advances in the field of cardiac regeneration with the creation of in vitro human pluripotent stem cell-derived cardiomyocyte tissue engineered constructs. However, these engineered constructs exhibit a functionally immature, disorganized, fetal-like phenotype that is not equivalent physiologically to native adult cardiac tissue. Due to this major limitation, many recent studies have investigated approaches to improve pluripotent stem cell-derived cardiomyocyte maturation to close this large functionality gap between engineered and native cardiac tissue. This review integrates the natural developmental mechanisms of cardiomyocyte structural and functional maturation. The variety of ways researchers have attempted to improve cardiomyocyte maturation in vitro by mimicking natural development, known as natural engineering, is readily discussed. The main focus of this review involves the synergistic role of electrical and mechanical stimulation, extracellular matrix interactions, and non-cardiomyocyte interactions in facilitating cardiomyocyte maturation. Overall, even with these current natural engineering approaches, pluripotent stem cell-derived cardiomyocytes within three-dimensional engineered heart tissue still remain mostly within the early to late fetal stages of cardiomyocyte maturity. Therefore, although the end goal is to achieve adult phenotypic maturity, more emphasis must be placed on elucidating how the in vivo fetal microenvironment drives cardiomyocyte

Orthogonal cutting forces in juvenile and mature Pinus taeda wood Forças de corte ortogonal na madeira juvenil e adulta de Pinus taeda

Directory of Open Access Journals (Sweden)

Raquel Gonçalves

2005-08-01

Full Text Available The distinct characteristics of juvenile and mature woods, which are observed particularly in softwoods, have an influence on processing due to their different mechanical resistance properties in relation to cutting operations. In the past, when most of the wood used industrially came from adult trees of natural forests, little importance was given to a distinction between different zones of the tree stem. At present, however, as the supply of mature trees with large diameters from native forests is constantly decreasing, the use of short-cycle trees has become a common practice, through the adoption of species that grow relatively fast, such as pines and eucalyptus. In both softwoods and hardwoods, juvenile wood cells are generally smaller and thinner than in mature wood, and this reflects on their density and mechanical resistance, which should have an effect on the cutting forces developed during processing. The main object of this research was to evaluate orthogonal cutting forces in juvenile and mature Pinus taeda woods. Cutting force magnitude differences were observed for those two regions of the trunk, with parallel cutting forces being 33.4% higher, on average, at the mature wood region for 90-0 cutting, and 12% higher for 90-90 cutting. This result is consistent with the distinct anatomical structures of the material, since the forces developed during machining depend directly upon its properties.As características distintas dos lenhos juvenil e adulto, existentes principalmente na formação das coníferas, influenciam na usinagem devido às diferentes propriedades de resistência mecânica ao corte. No passado, quando a maior parte da madeira utilizada industrialmente era proveniente de árvores adultas de florestas naturais, pouca importância era dada à diferenciação de zonas no tronco. Atualmente, no entanto, com o decréscimo constante do suprimento de árvores adultas de grandes diâmetros, provenientes de florestas nativas

Flowering Trees

Indian Academy of Sciences (India)

IAS Admin

Flowering Trees. Ailanthus excelsa Roxb. (INDIAN TREE OF. HEAVEN) of Simaroubaceae is a lofty tree with large pinnately compound alternate leaves, which are ... inflorescences, unisexual and greenish-yellow. Fruits are winged, wings many-nerved. Wood is used in making match sticks. 1. Male flower; 2. Female flower.

Population densities and tree diameter effects associated with verbenone treatments to reduce mountain pine beetle-caused mortality of lodgepole pine.

Science.gov (United States)

Progar, R A; Blackford, D C; Cluck, D R; Costello, S; Dunning, L B; Eager, T; Jorgensen, C L; Munson, A S; Steed, B; Rinella, M J

2013-02-01

Mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Curculionidae: Scolytinae), is among the primary causes of mature lodgepole pine, Pinus contorta variety latifolia mortality. Verbenone is the only antiaggregant semiochemical commercially available for reducing mountain pine beetle infestation of lodgepole pine. The success of verbenone treatments has varied greatly in previous studies because of differences in study duration, beetle population size, tree size, or other factors. To determine the ability of verbenone to protect lodgepole pine over long-term mountain pine beetle outbreaks, we applied verbenone treatments annually for 3 to 7 yr at five western United States sites. At one site, an outbreak did not develop; at two sites, verbenone reduced lodgepole pine mortality in medium and large diameter at breast height trees, and at the remaining two sites verbenone was ineffective at reducing beetle infestation. Verbenone reduced mountain pine beetle infestation of lodgepole pine trees in treated areas when populations built gradually or when outbreaks in surrounding untreated forests were of moderate severity. Verbenone did not protect trees when mountain pine beetle populations rapidly increase.

Mapping aerial metal deposition in metropolitan areas from tree bark: a case study in Sheffield, England.

Science.gov (United States)

Schelle, E; Rawlins, B G; Lark, R M; Webster, R; Staton, I; McLeod, C W

2008-09-01

We investigated the use of metals accumulated on tree bark for mapping their deposition across metropolitan Sheffield by sampling 642 trees of three common species. Mean concentrations of metals were generally an order of magnitude greater than in samples from a remote uncontaminated site. We found trivially small differences among tree species with respect to metal concentrations on bark, and in subsequent statistical analyses did not discriminate between them. We mapped the concentrations of As, Cd and Ni by lognormal universal kriging using parameters estimated by residual maximum likelihood (REML). The concentrations of Ni and Cd were greatest close to a large steel works, their probable source, and declined markedly within 500 m of it and from there more gradually over several kilometres. Arsenic was much more evenly distributed, probably as a result of locally mined coal burned in domestic fires for many years. Tree bark seems to integrate airborne pollution over time, and our findings show that sampling and analysing it are cost-effective means of mapping and identifying sources.

A method for the estimation of the residual error in the SALP approach for fault tree analysis

International Nuclear Information System (INIS)

Astolfi, M.; Contini, S.

1980-01-01

The aim of this report is the illustration of the algorithms implemented in the SALP-MP code for the estimation of the residual error. These algorithms are of more general use, and it would be possible to implement them on all codes of the series SALP previously developed, as well as, with minor modifications, to analysis procedures based on 'top-down' approaches. At the time, combined 'top-down' - 'bottom up' procedures are being studied in order to take advantage from both approaches for further reduction of computer time and better estimation of the residual error, for which the developed algorithms are still applicable

Carbon stable isotope-climate association in tree rings of Pinus pinaster and Pinus sylvestris in Mediterranean environments

International Nuclear Information System (INIS)

Bogino, Stella M; Bravo, Felipe

2014-01-01

Carbon isotope ratios, recorded as "1"3C/"1"2C variations in tree rings of woody species, are the result of physiological changes related to environmental conditions. The objective of this work was to analyze the association among carbon thirteen variability (δ"1"3C), climate variables and tree-ring growth of Pinus pinaster and Pinus sylvestris in central Spain. Pulverized woody material from the period 1975-1999 from four trees for each pine species was analyzed. To detect common patterns in δ"1"3C within each species and between δ"1"3C and growth indices, a principal component analysis (PCA) was performed. δ"1"3C of trees and the residual tree-ring chronologies were used at the PCA. Multilevel mixed linear models were applied between intrinsic water use efficiency (iWUE) and climate variables. Our results show an inverse significant correlation between δ"1"3C and tree-ring growth of both species. Winter and spring air moisture was negatively correlated with iWUE of Pinus pinaster. July maximum temperature was positively correlated with iWUE of Pinus sylvestris. As δ"1"3C is significantly related to climate and growth and it may be recommended as a valuable tool for tree growth dynamic analysis to withstand increasingly stressful climate conditions

Fruit production in three masting tree species does not rely on stored carbon reserves.

Science.gov (United States)

Hoch, Günter; Siegwolf, Rolf T W; Keel, Sonja G; Körner, Christian; Han, Qingmin

2013-03-01

Fruiting is typically considered to massively burden the seasonal carbon budget of trees. The cost of reproduction has therefore been suggested as a proximate factor explaining observed mast-fruiting patterns. Here, we used a large-scale, continuous (13)C labeling of mature, deciduous trees in a temperate Swiss forest to investigate to what extent fruit formation in three species with masting reproduction behavior (Carpinus betulus, Fagus sylvatica, Quercus petraea) relies on the import of stored carbon reserves. Using a free-air CO2 enrichment system, we exposed trees to (13)C-depleted CO2 during 8 consecutive years. By the end of this experiment, carbon reserve pools had significantly lower δ(13)C values compared to control trees. δ(13)C analysis of new biomass during the first season after termination of the CO2 enrichment allowed us to distinguish the sources of built-in carbon (old carbon reserves vs. current assimilates). Flowers and expanding leaves carried a significant (13)C label from old carbon stores. In contrast, fruits and vegetative infructescence tissues were exclusively produced from current, unlabeled photoassimilates in all three species, including F. sylvatica, which had a strong masting season. Analyses of δ(13)C in purified starch from xylem of fruit-bearing shoots revealed a complete turn-over of starch during the season, likely due to its usage for bud break. This study is the first to directly demonstrate that fruiting is independent from old carbon reserves in masting trees, with significant implications for mechanistic models that explain mast seeding.

[Population structure and regeneration strategy of relict deciduous broadleaved trees on Mount Tianmu, Zhejiang Province, China.

Science.gov (United States)

Shang, Kan Kan; Chen, Bo; Da, Liang Jun

2018-02-01

The population structure, regeneration ways and spatial relationships of six relict deci-duous broadleaved trees were examined based on community investigation on Mount Tianmu, East China. The results showed that relict deciduous broadleaved trees had a strong ability of vegetative reproduction and their population structure was generally belonged to intermittent type. Some relict species such as Cyclocarya paliurus and Liquidamb aracalycina regenerated discontinuously at appropriate sites via long-distance diffusion. Some species such as Emmenoptery henryi and Euptelea pleiospermum regenerated discontinuously around mature trees due to habitat limitation and frequent disturbance. After occupying forest gaps by seedling regeneration, C. paliurus, L. acalycina, Nyssasinensis and Liquidambar formosana could recruit and form multi-stemmed individuals by their inherent sprouting ability at relatively stable sites such as crest slope and side slope. At riverbed, valley slope and head hollow, recognized as unstable habitats, Emmenopterys henryi, E. pleiospermum, and L. formosana could also recruit by strong sprouting ability due to sparse seedlings and individual loss incurred by disturbance. Therefore, the relict deciduous broadleaved trees could be classified into two ecological species groups (repairment species for forest gap and supplement species for special habitat) based on spatial distribution and strategy of regeneration and competition. We suggested that the protection of special habitats of their communities should be strengthened.

Using a standing-tree acoustic tool to identify forest stands for the production of mechanically-graded lumber.

Science.gov (United States)

Paradis, Normand; Auty, David; Carter, Peter; Achim, Alexis

2013-03-12

This study investigates how the use of a Hitman ST300 acoustic sensor can help identify the best forest stands to be used as supply sources for the production of Machine Stress-Rated (MSR) lumber. Using two piezoelectric sensors, the ST300 measures the velocity of a mechanical wave induced in a standing tree. Measurements were made on 333 black spruce (Picea mariana (Mill.) BSP) trees from the North Shore region, Quebec (Canada) selected across a range of locations and along a chronosequence of elapsed time since the last fire (TSF). Logs were cut from a subsample of 39 trees, and sawn into 77 pieces of 38 mm × 89 mm cross-section before undergoing mechanical testing according to ASTM standard D-4761. A linear regression model was developed to predict the static modulus of elasticity of lumber using tree acoustic velocity and stem diameter at 1.3 m above ground level (R2 = 0.41). Results suggest that, at a regional level, 92% of the black spruce trees meet the requirements of MSR grade 1650Fb-1.5E, whilst 64% and 34% meet the 2100Fb-1.8E and 2400Fb-2.0E, respectively. Mature stands with a TSF < 150 years had 11 and 18% more boards in the latter two categories, respectively, and therefore represented the best supply source for MSR lumber.

Soil Moisture/ Tree Water Status Dynamics in Mid-Latitude Montane Forest, Southern Sierra Critical Zone Observatory, CA

Science.gov (United States)

Hartsough, P. C.; Malazian, A.; Meadows, M. W.; Roudneva, K.; Storch, J.; Bales, R. C.; Hopmans, J. W.

2010-12-01

As part of an effort to understand the root-water-nutrient interactions in the multi-dimensional soil/vegetation system surrounding large trees, in August 2008 we instrumented a mature white fir (Abies concolor) and the surrounding soil to better define the water balance in a single tree. In July 2010, we instrumented a second tree, a Ponderosa pine (Pinus ponderosa) in shallower soils on a drier, exposed slope. The trees are located in a mixed-conifer forest at an elevation of 2000m in the Southern Sierra Critical Zone Observatory. The deployment of more than 250 sensors to measure temperature, volumetric water content, matric potential, and snow depth surrounding the two trees complements sap-flow measurements in the trunk and stem-water-potential measurements in the canopy to capture the seasonal cycles of soil wetting and drying. We show here the results of a multi-year deployment of soil moisture sensors as critical integrators of hydrologic/ biotic interaction in a forested catchment. Sensor networks such as deployed here are a valuable tool in closing the water budget in dynamic forested catchments. While the exchange of energy, water and carbon is continuous, the pertinent fluxes are strongly heterogeneous in both space and time. Thus, the prediction of the behavior of the system across multiple scales constitutes a major challenge.

Quadratic residues and non-residues selected topics

CERN Document Server

Wright, Steve

2016-01-01

This book offers an account of the classical theory of quadratic residues and non-residues with the goal of using that theory as a lens through which to view the development of some of the fundamental methods employed in modern elementary, algebraic, and analytic number theory. The first three chapters present some basic facts and the history of quadratic residues and non-residues and discuss various proofs of the Law of Quadratic Reciprosity in depth, with an emphasis on the six proofs that Gauss published. The remaining seven chapters explore some interesting applications of the Law of Quadratic Reciprocity, prove some results concerning the distribution and arithmetic structure of quadratic residues and non-residues, provide a detailed proof of Dirichlet’s Class-Number Formula, and discuss the question of whether quadratic residues are randomly distributed. The text is a valuable resource for graduate and advanced undergraduate students as well as for mathematicians interested in number theory.

Why do trees die? Characterizing the drivers of background tree mortality

Science.gov (United States)

Das, Adrian J.; Stephenson, Nathan L.; Davis, Kristin P.

2016-01-01

The drivers of background tree mortality rates—the typical low rates of tree mortality found in forests in the absence of acute stresses like drought—are central to our understanding of forest dynamics, the effects of ongoing environmental changes on forests, and the causes and consequences of geographical gradients in the nature and strength of biotic interactions. To shed light on factors contributing to background tree mortality, we analyzed detailed pathological data from 200,668 tree-years of observation and 3,729 individual tree deaths, recorded over a 13-yr period in a network of old-growth forest plots in California's Sierra Nevada mountain range. We found that: (1) Biotic mortality factors (mostly insects and pathogens) dominated (58%), particularly in larger trees (86%). Bark beetles were the most prevalent (40%), even though there were no outbreaks during the study period; in contrast, the contribution of defoliators was negligible. (2) Relative occurrences of broad classes of mortality factors (biotic, 58%; suppression, 51%; and mechanical, 25%) are similar among tree taxa, but may vary with tree size and growth rate. (3) We found little evidence of distinct groups of mortality factors that predictably occur together on trees. Our results have at least three sets of implications. First, rather than being driven by abiotic factors such as lightning or windstorms, the “ambient” or “random” background mortality that many forest models presume to be independent of tree growth rate is instead dominated by biotic agents of tree mortality, with potentially critical implications for forecasting future mortality. Mechanistic models of background mortality, even for healthy, rapidly growing trees, must therefore include the insects and pathogens that kill trees. Second, the biotic agents of tree mortality, instead of occurring in a few predictable combinations, may generally act opportunistically and with a relatively large degree of independence from

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Gyrocarpus americanus Jacq. (Helicopter Tree) of Hernandiaceae is a moderate size deciduous tree that grows to about 12 m in height with a smooth, shining, greenish-white bark. The leaves are ovate, rarely irregularly ... flowers which are unpleasant smelling. Fruit is a woody nut with two long thin wings.

A right whale pootree: classification trees of faecal hormones identify reproductive states in North Atlantic right whales (Eubalaena glacialis).

Science.gov (United States)

Corkeron, Peter; Rolland, Rosalind M; Hunt, Kathleen E; Kraus, Scott D

2017-01-01

Immunoassay of hormone metabolites extracted from faecal samples of free-ranging large whales can provide biologically relevant information on reproductive state and stress responses. North Atlantic right whales ( Eubalaena glacialis Müller 1776) are an ideal model for testing the conservation value of faecal metabolites. Almost all North Atlantic right whales are individually identified, most of the population is sighted each year, and systematic survey effort extends back to 1986. North Atlantic right whales number trees as an alternative method of analysing multiple-hormone data sets, building on univariate models that have previously been used to describe hormone profiles of individual North Atlantic right whales of known reproductive state. Our tree correctly classified the age class, sex and reproductive state of 83% of 112 faecal samples from known individual whales. Pregnant females, lactating females and both mature and immature males were classified reliably using our model. Non-reproductive [i.e. 'resting' (not pregnant and not lactating) and immature] females proved the most unreliable to distinguish. There were three individual males that, given their age, would traditionally be considered immature but that our tree classed as mature males, possibly calling for a re-evaluation of their reproductive status. Our analysis reiterates the importance of considering the reproductive state of whales when assessing the relationship between cortisol concentrations and stress. Overall, these results confirm findings from previous univariate statistical analyses, but with a more robust multivariate approach that may prove useful for the multiple-analyte data sets that are increasingly used by conservation physiologists.

Rapid multiplication of Dalbergia sissoo Roxb.: a timber yielding tree legume through axillary shoot proliferation and ex vitro rooting.

Science.gov (United States)

Vibha, J B; Shekhawat, N S; Mehandru, Pooja; Dinesh, Rachana

2014-01-01

An efficient and improved method for in vitro propagation of mature tree of Dalbergia sissoo, an ecologically and commercially important timber yielding species, has been developed through axillary shoot proliferation. Bud breaking occurred from nodal shoot segments derived from rejuvenated shoots produced during early spring from a 20-25-year-old lopped tree, on MS medium containing 8.88 μM benzylaminopurine (BAP). Multiple shoots differentiated (20-21shoots/node) on re-culture of explants on half-strength agar gelled amended MS medium with a combination of 2.22 μM of BAP and 0.002 μM of thidiazuron (TDZ) with 1.0 mM each of Ca(NO3)2, K2SO4, KCl, and NH4(SO4)2. The maximum shoot multiplication (29-30 shoots/node) was achieved on subculturing in the above mentioned but liquid medium. Furthermore, the problem of shoot tip necrosis and defoliation observed on solid medium were overcome by the use of liquid medium. Ex vitro rooting was achieved on soilrite after basal treatment of microshoots with 984 μM of indole-3-butyric acid (IBA) for 2 min. About 90 % microshoots were rooted on soilrite within 2-3 weeks under the greenhouse conditions. From 20 nodal shoot segments, about 435 hardened plants were acclimatized and transplanted. This is the first report for rapid in vitro propagation of mature trees of D. sissoo on liquid medium followed by ex vitro rooting.

Identification and characterization of novel reptile cathelicidins from elapid snakes.

Science.gov (United States)

Zhao, Hui; Gan, Tong-Xiang; Liu, Xiao-Dong; Jin, Yang; Lee, Wen-Hui; Shen, Ji-Hong; Zhang, Yun

2008-10-01

Three cDNA sequences coding for elapid cathelicidins were cloned from constructed venom gland cDNA libraries of Naja atra, Bungarus fasciatus and Ophiophagus hannah. The open reading frames of the cloned elapid cathelicidins were all composed of 576bp and coded for 191 amino acid residue protein precursors. Each of the deduced elapid cathelicidin has a 22 amino acid residue signal peptide, a conserved cathelin domain of 135 amino acid residues and a mature antimicrobial peptide of 34 amino acid residues. Unlike the highly divergent cathelicidins in mammals, the nucleotide and deduced protein sequences of the three cloned elapid cathelicidins were remarkably conserved. All the elapid mature cathelicidins were predicted to be cleaved at Valine157 by elastase. OH-CATH, the deduced mature cathelicidin from king cobra, was chemically synthesized and it showed strong antibacterial activity against various bacteria with minimal inhibitory concentration of 1-20microg/ml in the presence of 1% NaCl. Meanwhile, the synthetic peptide showed no haemolytic activity toward human red blood cells even at a high dose of 200microg/ml. Phylogenetic analysis of cathelicidins from vertebrate suggested that elapid and viperid cathelicidins were grouped together in the tree. Snake cathelicidins were evolutionary closely related to the neutrophilic granule proteins (NGPs) from mouse, rat and rabbit. Snake cathelicidins also showed a close relationship with avian fowlicidins (1-3) and chicken myeloid antimicrobial peptide 27. Elapid cathelicidins might be used as models for the development of novel therapeutic drugs.

Cache-Oblivious Search Trees via Binary Trees of Small Height

DEFF Research Database (Denmark)

Brodal, G.S.; Fagerberg, R.; Jacob, R.

2002-01-01

We propose a version of cache oblivious search trees which is simpler than the previous proposal of Bender, Demaine and Farach-Colton and has the same complexity bounds. In particular, our data structure avoids the use of weight balanced B-trees, and can be implemented as just a single array......, and range queries in worst case O(logB n + k/B) memory transfers, where k is the size of the output.The basic idea of our data structure is to maintain a dynamic binary tree of height log n+O(1) using existing methods, embed this tree in a static binary tree, which in turn is embedded in an array in a cache...... oblivious fashion, using the van Emde Boas layout of Prokop.We also investigate the practicality of cache obliviousness in the area of search trees, by providing an empirical comparison of different methods for laying out a search tree in memory....

7 CFR 51.1904 - Maturity classification.

Science.gov (United States)

2010-01-01

... 7 Agriculture 2 2010-01-01 2010-01-01 false Maturity classification. 51.1904 Section 51.1904... STANDARDS) United States Consumer Standards for Fresh Tomatoes Size and Maturity Classification § 51.1904 Maturity classification. Tomatoes which are characteristically red when ripe, but are not overripe or soft...

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Boswellia serrata Roxb. ex Colebr. (Indian Frankincense tree) of Burseraceae is a large-sized deciduous tree that is native to India. Bark is thin, greenish-ash-coloured that exfoliates into smooth papery flakes. Stem exudes pinkish resin ... Fruit is a three-valved capsule. A green gum-resin exudes from the ...

Bundling of harvesting residues and whole-trees and the treatment of bundles; Hakkuutaehteiden ja kokopuiden niputus ja nippujen kaesittely

Energy Technology Data Exchange (ETDEWEB)

Kaipainen, H; Seppaenen, V; Rinne, S

1997-12-31

The conditions on which the bundling of the harvesting residues from spruce regeneration fellings would become profitable were studied. The calculations showed that one of the most important features was sufficient compaction of the bundle, so that the portion of the wood in the unit volume of the bundle has to be more than 40 %. The tests showed that the timber grab loader of farm tractor was insufficient for production of dense bundles. The feeding and compression device of the prototype bundler was constructed in the research and with this device the required density was obtained.The rate of compaction of the dry spruce felling residues was about 40 % and that of the fresh residues was more than 50 %. The comparison between the bundles showed that the calorific value of the fresh bundle per unit volume was nearly 30 % higher than that of the dry bundle. This means that the treatment of the bundles should be done of fresh felling residues. Drying of the bundles succeeded well, and the crushing and chipping tests showed that the processing of the bundles at the plant is possible. The treatability of the bundles was also excellent. By using the prototype, developed in the research, it was possible to produce a bundle of the fresh spruce harvesting residues, the diameter of which was about 50 cm and the length about 3 m, and the rate of compaction over 50 %. By these values the reduction target of the costs is obtainable

Bundling of harvesting residues and whole-trees and the treatment of bundles; Hakkuutaehteiden ja kokopuiden niputus ja nippujen kaesittely

Energy Technology Data Exchange (ETDEWEB)

Kaipainen, H.; Seppaenen, V.; Rinne, S.

1996-12-31

The conditions on which the bundling of the harvesting residues from spruce regeneration fellings would become profitable were studied. The calculations showed that one of the most important features was sufficient compaction of the bundle, so that the portion of the wood in the unit volume of the bundle has to be more than 40 %. The tests showed that the timber grab loader of farm tractor was insufficient for production of dense bundles. The feeding and compression device of the prototype bundler was constructed in the research and with this device the required density was obtained.The rate of compaction of the dry spruce felling residues was about 40 % and that of the fresh residues was more than 50 %. The comparison between the bundles showed that the calorific value of the fresh bundle per unit volume was nearly 30 % higher than that of the dry bundle. This means that the treatment of the bundles should be done of fresh felling residues. Drying of the bundles succeeded well, and the crushing and chipping tests showed that the processing of the bundles at the plant is possible. The treatability of the bundles was also excellent. By using the prototype, developed in the research, it was possible to produce a bundle of the fresh spruce harvesting residues, the diameter of which was about 50 cm and the length about 3 m, and the rate of compaction over 50 %. By these values the reduction target of the costs is obtainable

Different Patterns of Changes in the Dry Season Diameter at Breast Height of Dominant and Evergreen Tree Species in a Mature Subtropical Forest in South China

Institute of Scientific and Technical Information of China (English)

Jun-Hua Yan; Guo-Yi Zhou; De-Qiang Zhang; Xu-Li Tang; Xu Wang

2006-01-01

Information on changes in diameter at breast height (DBH) is important for net primary production (NPP)estimates, timing of forest inventory, and forest management. In the present study, patterns of DBH change were measured under field conditions during the dry season for three dominant and native tree species in a monsoon evergreen broad-leaved forest in the Dinghushan Biosphere Reserve. For each tree species,different patterns of DBH change were observed. In the case of the fast-growing tree species Castanopsis chinensis Hance, large diurnal fluctuations occur, with a peak DBH in the early morning (around 05:00 h) that decreases to a minimum by about 14:00 h. Both Schima superba Gardn. et Chemp and Cryptocarya chinensis (Hance) Hemsl. exhibited less diurnal swelling and shrinkage. Diurnal fluctuations for these species were observed on a few occasions over the period of observation. Graphical comparisons and statistical analysis of changes in DBH with meteorological variables indicate that for different trees, the different changes in DBH observed responded to different meteorological variables. Large stem changes were found to occur for Ca. chinensis trees that were associated with variations in solar radiation. However, both S. superba and Cr. chinensis were found to be less sensitive to solar radiation. Changes in the DBH of these two species were found to be controlled mainly by soil temperature and soil moisture. During the later dry season, with a lower soil temperature and soil moisture, all three tree species stopped growing and only negligible shrinkage, expansion, or fluctuation occurred, suggesting that the optimum time to measure tree growth in the Dinghushan Biosphere Reserve is the later dry season.

Estimation of the number of aphids carrying Citrus tristeza virus that visit adult citrus trees.

Science.gov (United States)

Marroquín, Carlos; Olmos, Antonio; Teresa Gorris, María; Bertolini, Edson; Carmen Martínez, M; Carbonell, Emilio A; Hermoso de Mendoza, Alfonso; Cambra, Mariano

2004-03-01

Aphid species were counted on citrus trees in orchards in Valencia, Spain, in the spring and autumn of 1997, 1998 and 1999. Moericke yellow water traps, the 'sticky shoot' method and counts of established colonies were used in extensive surveys in which 29,502 aphids were recorded and identified. Aphis spiraecola and Aphis gossypii were the most abundant aphid species. The numbers of aphid species landing on mature trees of grapefruit, sweet orange, lemon and clementine and satsuma mandarins, were estimated by counting the numbers of young shoots/tree and aphids trapped on sticky shoots. The proportions of the different aphid species captured were: A. gossypii (53%), A. spiraecola (32%), Toxoptera aurantii (11%), Myzus persicae (1%), Aphis craccivora (1%) and other species (2%). Clementine was the most visited species with 266,700 aphids landing/tree in spring 2000, followed by lemon (147,000), sweet orange (129,150), grapefruit (103,200), and satsuma (92,400). The numbers and relative percentages of aphids carrying Citrus tristeza virus (CTV) were assessed by nested RT-PCR in single closed tubes and analysed by extraction of RNA-CTV targets from trapped aphids. An average of 37,190 CTV-carrying aphids visited each tree in spring 2000 (29 per shoot). The percentage detection of viral RNA in the aphid species that landed were 27% for A. gossypii, 23% for A. spiraecola and 19% for T. aurantii. This high incidence of aphids carrying CTV is consistent with the high prevalence and rapid spread of CTV in sweet orange, clementine, and satsuma mandarins in recent years in the region. The infection rate was proportional to the number of aphids landing/tree.

Systolic trees and systolic language recognition by tree automata

Energy Technology Data Exchange (ETDEWEB)

Steinby, M

1983-01-01

K. Culik II, J. Gruska, A. Salomaa and D. Wood have studied the language recognition capabilities of certain types of systolically operating networks of processors (see research reports Cs-81-32, Cs-81-36 and Cs-82-01, Univ. of Waterloo, Ontario, Canada). In this paper, their model for systolic VLSI trees is formalised in terms of standard tree automaton theory, and the way in which some known facts about recognisable forests and tree transductions can be applied in VLSI tree theory is demonstrated. 13 references.

DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

Science.gov (United States)

Wehe, André; Bansal, Mukul S; Burleigh, J Gordon; Eulenstein, Oliver

2008-07-01

DupTree is a new software program for inferring rooted species trees from collections of gene trees using the gene tree parsimony approach. The program implements a novel algorithm that significantly improves upon the run time of standard search heuristics for gene tree parsimony, and enables the first truly genome-scale phylogenetic analyses. In addition, DupTree allows users to examine alternate rootings and to weight the reconciliation costs for gene trees. DupTree is an open source project written in C++. DupTree for Mac OS X, Windows, and Linux along with a sample dataset and an on-line manual are available at http://genome.cs.iastate.edu/CBL/DupTree

Cervical vertebral maturation as a biologic indicator of skeletal maturity.

Science.gov (United States)

Santiago, Rodrigo César; de Miranda Costa, Luiz Felipe; Vitral, Robert Willer Farinazzo; Fraga, Marcelo Reis; Bolognese, Ana Maria; Maia, Lucianne Cople

2012-11-01

To identify and review the literature regarding the reliability of cervical vertebrae maturation (CVM) staging to predict the pubertal spurt. The selection criteria included cross-sectional and longitudinal descriptive studies in humans that evaluated qualitatively or quantitatively the accuracy and reproducibility of the CVM method on lateral cephalometric radiographs, as well as the correlation with a standard method established by hand-wrist radiographs. The searches retrieved 343 unique citations. Twenty-three studies met the inclusion criteria. Six articles had moderate to high scores, while 17 of 23 had low scores. Analysis also showed a moderate to high statistically significant correlation between CVM and hand-wrist maturation methods. There was a moderate to high reproducibility of the CVM method, and only one specific study investigated the accuracy of the CVM index in detecting peak pubertal growth. This systematic review has shown that the studies on CVM method for radiographic assessment of skeletal maturation stages suffer from serious methodological failures. Better-designed studies with adequate accuracy, reproducibility, and correlation analysis, including studies with appropriate sensitivity-specificity analysis, should be performed.

Nonmarket benefits of reducing environmental effects of potential wildfires in beetle-killed trees: A contingent valuation study

Science.gov (United States)

Maryam Tabatabaei; John B. Loomis; Daniel W. McCollum

2015-01-01

We estimated Colorado households’ nonmarket values for two forest management options for reducing intensity of future wildfires and associated nonmarket environmental effects wildfires. The first policy is the traditional harvesting of pine beetle-killed trees and burning of the slash piles of residual materials on-site. The second involves harvesting but moving the...

Correlation between chronological age, cervical vertebral maturation and Fishman's skeletal maturity indicators in southern Chinese.

Science.gov (United States)

Alkhal, Hessa Abdulla; Wong, Ricky W K; Rabie, A Bakr M

2008-07-01

To investigate the correlation between chronological age, cervical vertebral maturation (CVM), and Fishman's hand-wrist skeletal maturity indicators in southern Chinese. Four hundred contemporary hand-wrist and lateral cephalometric radiographs of southern Chinese subjects were randomly selected and analyzed. The female subjects were between 10 and 15 years of age, and the male subjects were between 12 and 17 years of age; all subjects were within the circumpubertal period. The CVM was assessed using the method developed by Baccetti and coworkers, but the hand-wrist maturation was assessed using the method developed by Fishman. These two methods and the chronological age were correlated using the Spearman rank correlation analysis. The CVM was significantly correlated with the hand-wrist skeletal age (Spearman r male = 0.9206, female = 0.9363). All patients in the cervical maturation stage (CS3) of CVM were discovered to be in the skeletal maturational indicator (SMI2 or SMI3) stages of hand-wrist maturation (HWM), which was around the peak of the growth spurt. Low correlations were found between the CVM and chronological age (male r = 0.7577; female r = 0.7877) and between the HWM and chronological age (male r = 0.7492; female r = 0.7758). CVM is a valid indicator of skeletal growth during the circumpubertal and has a high correlation with the HWM for the southern Chinese population. However, the low correlations found between the chronological age and both CVM and HWM showed that the chronological age was not suitable to measure skeletal maturity.

Flowering Trees

Indian Academy of Sciences (India)

More Details Fulltext PDF. Volume 8 Issue 8 August 2003 pp 112-112 Flowering Trees. Zizyphus jujuba Lam. of Rhamnaceae · More Details Fulltext PDF. Volume 8 Issue 9 September 2003 pp 97-97 Flowering Trees. Moringa oleifera · More Details Fulltext PDF. Volume 8 Issue 10 October 2003 pp 100-100 Flowering Trees.

Set-Theoretic Approach to Maturity Models

DEFF Research Database (Denmark)

Lasrado, Lester Allan

Despite being widely accepted and applied, maturity models in Information Systems (IS) have been criticized for the lack of theoretical grounding, methodological rigor, empirical validations, and ignorance of multiple and non-linear paths to maturity. This PhD thesis focuses on addressing...... these criticisms by incorporating recent developments in configuration theory, in particular application of set-theoretic approaches. The aim is to show the potential of employing a set-theoretic approach for maturity model research and empirically demonstrating equifinal paths to maturity. Specifically...... methodological guidelines consisting of detailed procedures to systematically apply set theoretic approaches for maturity model research and provides demonstrations of it application on three datasets. The thesis is a collection of six research papers that are written in a sequential manner. The first paper...

Embedding complete ternary tree in hypercubes using AVL trees

NARCIS (Netherlands)

S.A. Choudum; I. Raman (Indhumathi)

2008-01-01

htmlabstractA complete ternary tree is a tree in which every non-leaf vertex has exactly three children. We prove that a complete ternary tree of height h, TTh, is embeddable in a hypercube of dimension . This result coincides with the result of [2]. However, in this paper, the embedding utilizes

Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.

Science.gov (United States)

Fouquier, Jennifer; Rideout, Jai Ram; Bolyen, Evan; Chase, John; Shiffer, Arron; McDonald, Daniel; Knight, Rob; Caporaso, J Gregory; Kelley, Scott T

2016-02-24

Fungi play critical roles in many ecosystems, cause serious diseases in plants and animals, and pose significant threats to human health and structural integrity problems in built environments. While most fungal diversity remains unknown, the development of PCR primers for the internal transcribed spacer (ITS) combined with next-generation sequencing has substantially improved our ability to profile fungal microbial diversity. Although the high sequence variability in the ITS region facilitates more accurate species identification, it also makes multiple sequence alignment and phylogenetic analysis unreliable across evolutionarily distant fungi because the sequences are hard to align accurately. To address this issue, we created ghost-tree, a bioinformatics tool that integrates sequence data from two genetic markers into a single phylogenetic tree that can be used for diversity analyses. Our approach starts with a "foundation" phylogeny based on one genetic marker whose sequences can be aligned across organisms spanning divergent taxonomic groups (e.g., fungal families). Then, "extension" phylogenies are built for more closely related organisms (e.g., fungal species or strains) using a second more rapidly evolving genetic marker. These smaller phylogenies are then grafted onto the foundation tree by mapping taxonomic names such that each corresponding foundation-tree tip would branch into its new "extension tree" child. We applied ghost-tree to graft fungal extension phylogenies derived from ITS sequences onto a foundation phylogeny derived from fungal 18S sequences. Our analysis of simulated and real fungal ITS data sets found that phylogenetic distances between fungal communities computed using ghost-tree phylogenies explained significantly more variance than non-phylogenetic distances. The phylogenetic metrics also improved our ability to distinguish small differences (effect sizes) between microbial communities, though results were similar to non

Response of leaf and whole-tree canopy conductance to wet conditions within a mature premontane tropical forest in Costa Rica

Science.gov (United States)

Aparecido, L. M. T.; Miller, G. R.; Cahill, A. T.; Andrews, R.; Moore, G. W.

2017-12-01

Tropical water recycling and carbon storage are dependent on canopy-atmosphere dynamics, which are substantially altered when rainfall occurs. However, models only indirectly consider leaf wetness as a driving factor for carbon and water fluxes. To better understand how leaf wetness condition affects stomatal and canopy conductance to water vapor, we tested a set of widely used models for a mature tropical forest of Costa Rica with prolonged periods of wet leaves. We relied on a year of sap flux measurements from 26 trees to estimate transpiration (Ec) and multiple micrometeorological profile measurements from a 40-m tower to be used in the models. Stomatal conductance (gs) models included those proposed by Jones (1992) (gs-J), using shaded and sunlit leaf temperatures, and Monteith and Unsworth (1990) (gs-MU), using air temperature. Canopy conductance (gc) models included those proposed by McNaughton and Jarvis (1983) (gc-MJ) and Penman-Monteith (gc-PM). Between gs and gc, gc had the largest differences within models during dry periods; while estimates were most similar during wet periods. Yet, all gc and gs estimates on wet days were at least as high as on dry days, indicative of their insensitivity to leaf wetness. Shaded leaf gs averaged 26% higher than in sunlit leaves. Additionally, the highly decoupled interface (Ω>0.90) reflected multiple environmental drivers that may influence conductance (e.g. vapor pressure deficit and leaf temperature). This was also seen through large shifts of diurnal peaks of gs and gc (up to 2 hours earlier than Ec) associated with the daily variation of air temperature and net radiation. Overall, this study led to three major insights: 1) gc and gs cannot accurately be predicted under wet conditions without accounting for leaf wetness, 2) even during dry days, low vapor pressure deficits interfere with model accuracy, and 3) intermittent rain during semi-dry and wet days cause large fluctuations in gc and gs estimates. Thus, it

Trees are good, but…

Science.gov (United States)

E.G. McPherson; F. Ferrini

2010-01-01

We know that “trees are good,” and most people believe this to be true. But if this is so, why are so many trees neglected, and so many tree wells empty? An individual’s attitude toward trees may result from their firsthand encounters with specific trees. Understanding how attitudes about trees are shaped, particularly aversion to trees, is critical to the business of...

Multiple-purpose trees for pastoral farming in New Zealand: with emphasis on tree legumes. [Lucerne Tree: Medick Tree

Energy Technology Data Exchange (ETDEWEB)

Davies, D J.G.; Macfarlane, R P

1979-01-01

The potential for soil conservation and agroforestry of several native and exotic legumes is discussed. Flowering period, chemical composition of leaves/pods, hardiness to frost and drought, timber value, forage potential for livestock and bees, ornamental value and other products are tabulated with information on up to 38 species. Two low-growing species that have proved useful for slope stabilization as well as forage are tree lucerne (Cytisus palmensis) and tree medick (Medicago arborea), the latter being shrubby and more suitable for cold districts. Gleditsia triacanthos is recommended as a shade and fodder tree for farm pasture.

Chemical composition and natural durability of juvenile and mature heartwood of Robinia pseudoacacia L.

Directory of Open Access Journals (Sweden)

João V.F Latorraca

2011-09-01

Full Text Available The aim of this study was to characterize the properties of juvenile and mature heartwood of Robinia pseudoacacia L. (black locust. The content, the composition, and subcellular localization of heartwood extractives were studied in 14 old-grown trees from forest sites in Germany and Hungary, as well as in 16 younger trees of four clone types. Heartwood extractives (methanol and acetone extraction were analysed by HPLC-chromatography. UV microspectrophotometry was used to localize the extractives in the wood cell walls. The natural durability of juvenile and mature heartwood was analysed according to the European standard EN 350-1. Growth analyses, as well as the chemical analyses, showed that in Robinia the formation of juvenile wood is restricted to the first 10-15 years of cambial growth. In the heartwood high contents of phenolic compounds and flavonoids were present, which were in high concentrations in the cell walls of the axial parenchyma and of the vessels. In the juvenile heartwood, the content of these extractives is significantly lower than in the mature heartwood. In agree, the juvenile heartwood had a lower resistance to decay by Coniophora puteana (brown rot fungus and Coriolus versicolor (white rot fungus compared to the mature.O objetivo deste estudo foi caracterizar as propriedades da região de cerne dos lenhos juvenis e adultos de Robinia pseudoacacia L. O conteúdo, a composição, bem como a localização subcelular dos extrativos foram estudados em 14 árvores de florestas de produção na Alemanha e na Hungria, assim como em 16 árvores de quatro tipos clone. Os extrativos (metanol e acetona extração foram analisados por cromatografia-HPLC. O microespectrofotômetro de ultra violeta foi utilizado para localizar os extrativos nas paredes celulares da madeira. A durabilidade natural do lenho juvenil e adulto foi analisada de acordo com a norma europeia EN 350-1. Análises do incremento, bem como as análises qu

Shedding light on tree growth : ring analysis of juvenile tropical trees

NARCIS (Netherlands)

Soliz Gamboa, C.C.

2010-01-01

In the understory of tropical forests light is believed to be the main limiting growth factor for the newly established trees. Trees growing in shade of the understory may experience periods of slow radial growth. It is expected that gaps created by tree or branch fall will provoke tree growth

Deconvolution of the tree ring based delta13C record

International Nuclear Information System (INIS)

Peng, T.; Broecker, W.S.; Freyer, H.D.; Trumbore, S.

1983-01-01

We assumed that the tree-ring based 13 C/ 12 C record constructed by Freyer and Belacy (1983) to be representative of the fossil fuel and forest-soil induced 13 C/ 12 C change for atmospheric CO 2 . Through the use of a modification of the Oeschger et al. ocean model, we have computed the contribution of the combustion of coal, oil, and natural gas to this observed 13 C/ 12 C change. A large residual remains when the tree-ring-based record is corrected for the contribution of fossil fuel CO 2 . A deconvolution was performed on this residual to determine the time history and magnitude of the forest-soil reservoir changes over the past 150 years. Several important conclusions were reached. (1) The magnitude of the integrated CO 2 input from these sources was about 1.6 times that from fossil fuels. (2) The forest-soil contribution reached a broad maximum centered at about 1900. (3) Over the 2 decade period covered by the Mauna Loa atmospheric CO 2 content record, the input from forests and soils was about 30% that from fossil fuels. (4) The 13 C/ 12 C trend over the last 20 years was dominated by the input of fossil fuel CO 2 . (5) The forest-soil release did not contribute significantly to the secular increase in atmospheric CO 2 observed over the last 20 years. (6) The pre-1850 atmospheric p2 values must have been in the range 245 to 270 x 10 -6 atmospheres

Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

Science.gov (United States)

2013-01-01

Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

EFFECT OF POST-LOGGING SILVICULTURAL TREATMENT ON GROWTH RATES OF RESIDUAL STAND IN A TROPICAL FOREST

Directory of Open Access Journals (Sweden)

Haruni Krisnawati

2010-12-01

Full Text Available Post-logging silvicultural treatments are generally performed to improve yields of the remaining tree species by increasing their growth rate. In this study the effects of silvicultural treatment on the growth rates of commercial (dipterocarps and non-dipterocarps as well as non- commercial tree species in a tropical forest in West Kalimantan were examined and were compared to a control treatment. Silvicultural treatment applied was liberation of future crop trees from lianas and neighbouring competing trees. Treatments were applied to six plots of 80 m x 80 m each. The plots comprised 64 quadrats of 10 m x 10 m to allow better control of measurements. The treatment and control plots were established 6 years after logging. Effects were measured 2,4 and 7 years after treatment application. In all obser vation periods, the growth rates increased with silvicultural treatment. Overall, commercial dipterocarps, commercial non-dipterocarps and non-commercial tree species groups differed in response to silvicultural treatment. The growth rates of commercial tree species in plots that received silvicultural treatment were 62–97% higher than in the control plots. For non-commercial tree species, the increase of growth rates was 20–58%, compared to the control plots. These results indicate that the application of silvicultural treatments after logging could help improve the growth of the residual stands. These provide quantitative information that silvicultural treatments in logged-over forest should be considered as a viable management option and may guide the choice of cutting cycle.

The diversity and richness of tree species of Tambang Sawah forest Kerinci-Seblat National Park Sumatra Indonesia

Directory of Open Access Journals (Sweden)

Agus Susatya

2010-12-01

Full Text Available The conservation of tropical ecosystem is increasingly relevant as the recent global warming and climate change generate serious impacts on human life. Tropical forest becomes an important ecosystem to fight global warming due to its capability to sequester atmospheric carbon and to mitigate climate change. It is very unfortunate that such a vital ecosystem has been severely subjected to conversion to both plantations and illegal loggings. The tropical ecosystem has long been recognized to have high species diversity, but very few individual trees per species. The latter is almost ignored, even though can certainly bring serious difficulties on tree conservation. The objectives of the research were to know the tree community structure of Tambang Sawah Forest, Kerinci-Seblat National Park, and to determine the rareness of tree species. A plot of 1 ha was established at Tambang Sawah, Kerinci-Seblat National Park, Lebong Regency. All trees with BDH of > 5 cm were collected their herbarium specimens, and identifi ed. The results showed that Tambang Sawah forest consists of 42 families, 94 genera, and 185 tree species/ha. It has 19.51% (8 families, and 26.82% (10 families respectively categorized as very rare and rare. The pattern also occurs at genus level, where both categories contribute to 81.91% (78 genera of the total genera. In species level, both are respectively 90 and 28 species, and altogether contribute to 63.78% of the total species. These values appeared higher than that of the other forests in Bengkulu. Across taxon level, very rare and rare categories appeared to be an ecological attribute in Sumatran forests. This implies that the loss of single tree can cause the loss of entire family. The conservation works even turn into more difficult, because tropical trees are commonly diocious, even bisexual trees, they tend to be self-incompatible, and out-crossed, and required at least 200 mature trees to ensure sexual regeneration and to

Long-term effects of drought on tree-ring growth and carbon isotope variability in Scots pine in a dry environment.

Science.gov (United States)

Timofeeva, Galina; Treydte, Kerstin; Bugmann, Harald; Rigling, Andreas; Schaub, Marcus; Siegwolf, Rolf; Saurer, Matthias

2017-08-01

Drought frequency is increasing in many parts of the world and may enhance tree decline and mortality. The underlying physiological mechanisms are poorly understood, however, particularly regarding chronic effects of long-term drought and the response to increasing temperature and vapor pressure deficit (VPD). We combined analyses of radial growth and stable carbon isotope ratios (δ13C) in tree rings in a mature Scots pine (Pinus sylvestris L.) forest over the 20th century to elucidate causes of tree mortality in one of the driest parts of the European Alps (Pfynwald, Switzerland). We further compared trees that have recently died with living trees in a 10-year irrigation experiment, where annual precipitation was doubled. We found a sustained growth increase and immediate depletion of δ13C values for irrigated trees, indicating higher stomatal conductance and thus indeed demonstrating that water is a key limiting factor for growth. Growth of the now-dead trees started declining in the mid-1980s, when both mean temperature and VPD increased strongly. But growth of these trees was reduced to some extent already several decades earlier, while intrinsic water-use efficiency derived from δ13C values was higher. This indicates a more conservative water-use strategy compared with surviving trees, possibly at the cost of low carbon uptake and long-term reduction of the needle mass. We observed reduced climatic sensitivity of raw tree-ring δ13C for the now-dead in contrast to surviving trees, indicating impaired stomatal regulation, although this difference between the tree groups was smaller after detrending the data. Higher autocorrelation and a lower inter-annual δ13C variability of the now-dead trees further indicates a strong dependence on (low) carbon reserves. We conclude that the recent increase in atmospheric moisture demand in combination with insufficient soil water supply was the main trigger for mortality of those trees that were weakened by long

Trees

Science.gov (United States)

Al-Khaja, Nawal

2007-01-01

This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

The role of research and development work on the production costs of logging residue chips

International Nuclear Information System (INIS)

Nousiainen, I.

1998-01-01

Purchase of logging residue chips in the early 80s was mainly based on production chains in which the residues were collected with load-carrying tractors at the road-side storage, from which it was chipped or crushed directly into the trailer of a waiting lorry. Six new production chains were developed in the national Bioenergy Research Programme. Three of these are now commercial. Kotimaiset Energiat Pekka Lahti Ky has developed, on the basis of a traditional logging residue production chain, a high-efficiency EVOLUTION intermediate storage chipper, suitable for chipping of logging residues. Oy Logset Ab has developed a new type of lot-chipping chip-harvester, the LOGSET 536C. Nested containers have also been developed for the lot-chipping method. MOHA multi-purpose chipper, in which the chipping and lorry-transportation of chips have been integrated, has also been developed as a part of the research programme. In addition to these, a chipper-container lorry combination, transportation of complete logging residues, and whole- tree skidding have been developed in the project for production of logging residue chips. In the beginning of the 80s the production costs of logging residues at the place of utilization were about 52 FIM/MWh, and the average transportation distance 50 km. In 1992 the production costs, 64 FIM/MWh at the distance of 100 km, was significantly higher than the price of alternative fuels. The lowest production cost level, obtainable by the developed methods is 46 FIM/MWh

Spectra of chemical trees

International Nuclear Information System (INIS)

Balasubramanian, K.

1982-01-01

A method is developed for obtaining the spectra of trees of NMR and chemical interests. The characteristic polynomials of branched trees can be obtained in terms of the characteristic polynomials of unbranched trees and branches by pruning the tree at the joints. The unbranched trees can also be broken down further until a tree containing just two vertices is obtained. The effectively reduces the order of the secular determinant of the tree used at the beginning to determinants of orders atmost equal to the number of vertices in the branch containing the largest number of vertices. An illustrative example of a NMR graph is given for which the 22 x 22 secular determinant is reduced to determinants of orders atmost 4 x 4 in just the second step of the algorithm. The tree pruning algorithm can be applied even to trees with no symmetry elements and such a factoring can be achieved. Methods developed here can be elegantly used to find if two trees are cospectral and to construct cospectral trees

Generation of low-Btu fuel gas from agricultural residues experiments with a laboratory scale gas producer

Energy Technology Data Exchange (ETDEWEB)

Williams, R O

1977-01-01

Two successive laboratory-scale, downdraft gas producers were fabricated and tested. Agricultural and food processing residues including walnut shells, corn cobs, tree prunings, and cotton gin waste, were converted to a low Btu producer gas. The performance of 2 spark ignition engines, when running on producer gas, was highly satisfactory. The ability of the producer to maintain a continuous supply of good quality gas was determined largely by firebox configuration. Fuel handling and fuel flow control problems tended to be specific to individual types of residues. During each test run, air input, firebox temperature, fuel consumption rate, and pressure differential across the producer were monitored. An overall conversion efficiency of 65% was achieved.