WorldWideScience

Sample records for regions synonymous sites

  1. Patterns of mutation and selection at synonymous sites in Drosophila

    DEFF Research Database (Denmark)

    Singh, Nadia D; Bauer DuMont, Vanessa L; Hubisz, Melissa J

    2007-01-01

    , when applied to 18 coding sequences in 3 species of Drosophila, confirmed an earlier report that the Notch gene in Drosophila melanogaster was evolving under selection in favor of those codons defined as unpreferred in this species. This finding opened the possibility that synonymous sites may...... be subject to a variety of selective pressures beyond weak selection for increased frequencies of the codons currently defined as "preferred" in D. melanogaster. To further explore patterns of synonymous site evolution in Drosophila in a lineage-specific manner, we expanded the application of the maximum...... likelihood framework to 8,452 protein coding sequences with well-defined orthology in D. melanogaster, Drosophila sechellia, and Drosophila yakuba. Our analyses reveal intragenomic and interspecific variation in mutational patterns as well as in patterns and intensity of selection on synonymous sites. In D...

  2. Regional energy facility siting analysis

    International Nuclear Information System (INIS)

    Eberhart, R.C.; Eagles, T.W.

    1976-01-01

    Results of the energy facility siting analysis portion of a regional pilot study performed for the anticipated National Energy Siting and Facility Report are presented. The question of cell analysis versus site-specific analysis is explored, including an evaluation of the difference in depth between the two approaches. A discussion of the possible accomplishments of regional analysis is presented. It is concluded that regional sitting analysis could be of use in a national siting study, if its inherent limits are recognized

  3. The distribution of synonymous codon choice in the translation initiation region of dengue virus.

    Directory of Open Access Journals (Sweden)

    Jian-hua Zhou

    Full Text Available Dengue is the most common arthropod-borne viral (Arboviral illness in humans. The genetic features concerning the codon usage of dengue virus (DENV were analyzed by the relative synonymous codon usage, the effective number of codons and the codon adaptation index. The evolutionary distance between DENV and the natural hosts (Homo sapiens, Pan troglodytes, Aedes albopictus and Aedes aegypti was estimated by a novel formula. Finally, the synonymous codon usage preference for the translation initiation region of this virus was also analyzed. The result indicates that the general trend of the 59 synonymous codon usage of the four genotypes of DENV are similar to each other, and this pattern has no link with the geographic distribution of the virus. The effect of codon usage pattern of Aedes albopictus and Aedes aegypti on the formation of codon usage of DENV is stronger than that of the two primates. Turning to the codon usage preference of the translation initiation region of this virus, some codons pairing to low tRNA copy numbers in the two primates have a stronger tendency to exist in the translation initiation region than those in the open reading frame of DENV. Although DENV, like other RNA viruses, has a high mutation to adapt its hosts, the regulatory features about the synonymous codon usage have been 'branded' on the translation initiation region of this virus in order to hijack the translational mechanisms of the hosts.

  4. Region 9 NPL Sites (Superfund Sites 2013)

    Science.gov (United States)

    NPL site POINT locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup under the Superfund program. Eligibility is determined by a scoring method called Hazard Ranking System. Sites with high scores are listed on the NPL. The majority of the locations are derived from polygon centroids of digitized site boundaries. The remaining locations were generated from address geocoding and digitizing. Area covered by this data set include Arizona, California, Nevada, Hawaii, Guam, American Samoa, Northern Marianas and Trust Territories. Attributes include NPL status codes, NPL industry type codes and environmental indicators. Related table, NPL_Contaminants contains information about contaminated media types and chemicals. This is a one-to-many relate and can be related to the feature class using the relationship classes under the Feature Data Set ENVIRO_CONTAMINANT.

  5. Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites

    Science.gov (United States)

    Sun, Yu; Tamarit, Daniel

    2017-01-01

    Abstract The major codon preference model suggests that codons read by tRNAs in high concentrations are preferentially utilized in highly expressed genes. However, the identity of the optimal codons differs between species although the forces driving such changes are poorly understood. We suggest that these questions can be tackled by placing codon usage studies in a phylogenetic framework and that bacterial genomes with extreme nucleotide composition biases provide informative model systems. Switches in the background substitution biases from GC to AT have occurred in Gardnerella vaginalis (GC = 32%), and from AT to GC in Lactobacillus delbrueckii (GC = 62%) and Lactobacillus fermentum (GC = 63%). We show that despite the large effects on codon usage patterns by these switches, all three species evolve under selection on synonymous sites. In G. vaginalis, the dramatic codon frequency changes coincide with shifts of optimal codons. In contrast, the optimal codons have not shifted in the two Lactobacillus genomes despite an increased fraction of GC-ending codons. We suggest that all three species are in different phases of an on-going shift of optimal codons, and attribute the difference to a stronger background substitution bias and/or longer time since the switch in G. vaginalis. We show that comparative and correlative methods for optimal codon identification yield conflicting results for genomes in flux and discuss possible reasons for the mispredictions. We conclude that switches in the direction of the background substitution biases can drive major shifts in codon preference patterns even under sustained selection on synonymous codon sites. PMID:27540085

  6. Near Regional and Site Investigations of the Temelin NPP Site

    International Nuclear Information System (INIS)

    Prachar, Ivan; Vacek, Jiri; Heralecky, Pavel

    2011-01-01

    The Temelin NPP is worldwide through heated discussion with nuclear energetic opposition. In addition this discussion goes beyond a border of the Czech Republic. On the other side, results of several international supervisions shown that Temelin NPP is fully comparable with the safest nuclear power plants in the world regarding its technical design and safety functions. This presentation deals with the near regional and site investigations of the Temelin NPP Site. It must be noted that although the Temelin site is situated in the area with low seismicity, item of seismicity is a basic argument against Temelin NPP and therefore a detail seismic hazard assessment was performed

  7. Tuning protein expression using synonymous codon libraries targeted to the 5' mRNA coding region

    DEFF Research Database (Denmark)

    Goltermann, Lise; Borch Jensen, Martin; Bentin, Thomas

    2011-01-01

    intermediate expression levels of green fluorescent protein in Escherichia coli. At least in one case, no apparent effect on protein stability was observed, pointing to RNA level effects as the principal reason for the observed expression differences. Targeting a synonymous codon library to the 5' coding...

  8. New synonyms and a new name in Asteraceae: Senecioneae from the southern African winter rainfall region

    Directory of Open Access Journals (Sweden)

    J. C. Manning

    2010-07-01

    Full Text Available A review of the genera Othonna and Senecio undertaken for the forthcoming Greater Cape plants 2: Namaqualand-southern Namib and western Karoo (Manning in prep. led to a re-examination of the taxonomic status of several species. This was facilitated by the recent availability of high-resolution digital images on the Aluka website (www.aluka.org of the Drege isotypes in the Paris Herbarium that formed the basis of many species described by De Candolle in his Prodromus systematis naturalis regni vegetabilis. These images made it possible to identify several names whose application had remained uncertain until now. Each case is briefly discussed, with citation of additional relevant herbarium specimens. The following species are reduced to synonomy: O. incisa Harv. is included in O. rosea Harv.; O. spektakelensis Compton and O. zeyheri Sond. ex Harv. are included in O. retrorsa DC.; S. maydae Merxm. is included in S. albopunctatus Bolus, which is now considered to include forms with radiate and discoid capitula; S. cakilefolius DC. is included in  O. arenarius Thunb.; S. pearsonii Hutch, is included in O. aspertdus DC.; S. parvifolius DC. is included in S. carroensis DC.; S. eriobasis DC. is included in S. erosus L.f.; and S. lobelioides DC. is included in S. flavus (Decne. Sch.Bip. The name S. panduratus (Thunb. Less, is identified as a synonym of S. erosus L.f. and plants that are currently know n under this name should be called S. robertiifolius DC. The confusion in the application o f the names O. perfoliata (L.f. Jacq. and O. filicaulis Jacq. is examined. O. perfoliata is lecto- typified against a specimen in the Linnaean Herbarium (LINN  w ith radiate capitula. The name O. filicaulis correctly applies to a radiate species and is treated as a synonym of O. perfoliata. The vegetatively similar taxon with disciform capitula that is currently known as O. filicaulis should be known as (  undulosa (DC. J.C.Manning  & Goldblatt, comb. nov. The

  9. National Priorities List (NPL) Site Polygons, Region 9, 2012, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  10. National Priorities List (NPL) Site Polygons, Region 9, 2010, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  11. National Priorities List (NPL) Site Polygons, Region 9, 2014, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  12. National Priorities List (NPL) Site Polygons, Region 9, 2013, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  13. National Priorities List (NPL) Site Points, Region 9, 2015, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site point locations for the US EPA, Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  14. National Priorities List (NPL) Site Polygons, Region 9, 2015, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  15. National Priorities List (NPL) Site Polygons, Region 9, 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site POLYGON locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  16. National Priorities List (NPL) Site Points, Region 9, 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site point locations for the US EPA, Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  17. National Priorities List (NPL) Site Points, Region 9, 2014, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — NPL site point locations for the US EPA Region 9. NPL (National Priorities List) sites are hazardous waste sites that are eligible for extensive long-term cleanup...

  18. Robust detection of discordant sites in regional frequency analysis

    NARCIS (Netherlands)

    Neykov, N.M.; Neytchev, P.N.; Van Gelder, P.H.A.J.M.; Todorov, V.K.

    2007-01-01

    The discordancy measure in terms of the sample L?moment ratios (L?CV, L?skewness, L?kurtosis) of the at?site data is widely recommended in the screening process of atypical sites in the regional frequency analysis (RFA). The sample mean and the covariance matrix of the L?moments ratios, on which the

  19. Thermophysical Properties of the Phoenix Mars Landing Site Study Regions

    Science.gov (United States)

    Putzig, N. E.; Mellon, M. T.; Golombek, M. P.; Arvidson, R. E.

    2006-03-01

    Analysis of Phoenix Mars study regions places 4 of 5 in a previously-identified duricrust-dominated thermophysical unit which also contains the Viking and Spirit landing sites. Extrapolation of lander-observed properties to the study regions may be complicated by surface heterogeneity.

  20. Geo-Proxy-Based Site Classification for Regional Zonation of Seismic Site Effects in South Korea

    Directory of Open Access Journals (Sweden)

    Chang-Guk Sun

    2018-02-01

    Full Text Available Seismic site effects and topographic effects related to ground motion occur during an earthquake due to site-specific geotechnical or geological characteristics, including the geological or geographical structure and the characteristics of near-surface sub-soil layers. Site-specific site effects due to geological conditions have been confirmed in recent earthquake events. Earthquake-induced damage has mainly occurred at accumulated soft soil layers under basins or along coasts and rivers. An alternative method has recently been proposed for evaluating regional seismic site effects and amplification factors using digital elevation models (DEM. High-quality DEMs at high resolutions may be employed to resolve finer-scale variations in topographic gradients and consequently, correlated site response parameters. Because there are many regions in South Korea lacking borehole datasets, which are insufficient for site classification only using borehole datasets, a DEM-based proxy for seismic zonation can be effective. Thus, in this study, geo-proxy-based site classification was proposed based on empirical correlations with site response parameters and conducted for regional zonation of seismic site effects to identify the amplification of characteristics in the western metropolitan areas of South Korea, depending on the site-specific geo-spatial conditions.

  1. Synonymous mutations in RNASEH2A create cryptic splice sites impairing RNase H2 enzyme function in Aicardi-Goutières syndrome.

    Science.gov (United States)

    Rice, Gillian I; Reijns, Martin A M; Coffin, Stephanie R; Forte, Gabriella M A; Anderson, Beverley H; Szynkiewicz, Marcin; Gornall, Hannah; Gent, David; Leitch, Andrea; Botella, Maria P; Fazzi, Elisa; Gener, Blanca; Lagae, Lieven; Olivieri, Ivana; Orcesi, Simona; Swoboda, Kathryn J; Perrino, Fred W; Jackson, Andrew P; Crow, Yanick J

    2013-08-01

    Aicardi-Goutières syndrome is an inflammatory disorder resulting from mutations in TREX1, RNASEH2A/2B/2C, SAMHD1, or ADAR1. Here, we provide molecular, biochemical, and cellular evidence for the pathogenicity of two synonymous variants in RNASEH2A. Firstly, the c.69G>A (p.Val23Val) mutation causes the formation of a splice donor site within exon 1, resulting in an out of frame deletion at the end of exon 1, leading to reduced RNase H2 protein levels. The second mutation, c.75C>T (p.Arg25Arg), also introduces a splice donor site within exon 1, and the internal deletion of 18 amino acids. The truncated protein still forms a heterotrimeric RNase H2 complex, but lacks catalytic activity. However, as a likely result of leaky splicing, a small amount of full-length active protein is apparently produced in an individual homozygous for this mutation. Recognition of the disease causing status of these variants allows for diagnostic testing in relevant families. © 2013 WILEY PERIODICALS, INC.

  2. X-linked Alport syndrome associated with a synonymous p.Gly292Gly mutation alters the splicing donor site of the type IV collagen alpha chain 5 gene.

    Science.gov (United States)

    Fu, Xue Jun; Nozu, Kandai; Eguchi, Aya; Nozu, Yoshimi; Morisada, Naoya; Shono, Akemi; Taniguchi-Ikeda, Mariko; Shima, Yuko; Nakanishi, Koichi; Vorechovsky, Igor; Iijima, Kazumoto

    2016-10-01

    X-linked Alport syndrome (XLAS) is a progressive hereditary nephropathy caused by mutations in the type IV collagen alpha chain 5 gene (COL4A5). Although many COL4A5 mutations have previously been identified, pathogenic synonymous mutations have not yet been described. A family with XLAS underwent mutational analyses of COL4A5 by PCR and direct sequencing, as well as transcript analysis of potential splice site mutations. In silico analysis was also conducted to predict the disruption of splicing factor binding sites. Immunohistochemistry (IHC) of kidney biopsies was used to detect α2 and α5 chain expression. We identified a hemizygous point mutation, c.876A>T, in exon 15 of COL4A5 in the proband and his brother, which is predicted to result in a synonymous amino acid change, p.(Gly292Gly). Transcript analysis showed that this mutation potentially altered splicing because it disrupted the splicing factor binding site. The kidney biopsy of the proband showed lamellation of the glomerular basement membrane (GBM), while IHC revealed negative α5(IV) staining in the GBM and Bowman's capsule, which is typical of XLAS. This is the first report of a synonymous COL4A5 substitution being responsible for XLAS. Our findings suggest that transcript analysis should be conducted for the future correct assessment of silent mutations.

  3. Towards a regional siting approach for canadian nuclear fuel waste

    International Nuclear Information System (INIS)

    Kuhn, R.G.

    1999-01-01

    The proposal to construct a nuclear fuel waste (NFW) disposal facility in Canada is fraught with difficulties, particularly with respect to gaining public acceptance and consent. Public perceptions of risk associated with a disposal facility are generally negative. Indeed, it was found that over 60% of residents in northern Ontario communities are opposed to the possibility of a disposal facility being constructed within 120 km of their community. Even after being offered the possibility of compensation and incentives, the majority of residents are strongly opposed. Canadian decision makers have generally endorsed a siting framework known as the open siting approach. The major characteristic of this approach is that it allows for substantial public participation in any siting process. It is premised on the notion that only communities where a majority of citizens favour the siting of a facility will be considered as potential hosts. However, given that the majority of residents on the Ontario portion of the Canadian Shield are strongly opposed to a NFW facility, the open approach will not be a panacea for a successful siting process. The major limitation of this approach is the fact that a single community cannot be isolated from its surrounding region and communities. The purpose of this paper is to work towards the development of a regional siting strategy for Canadian nuclear fuel waste management. There are no clear precedents of a regional siting approach to facility location in Canada. However, some analogous planning regimes and initiatives have been attempted. Common to these initiatives is the consideration of a large geographical region and attempts to integrate, at least formally, social, cultural, political and environmental concerns in a coherent and comprehensive manner. Under this type of 'siting strategy' NFW management would be considered within a broad array of resource management initiatives, social and cultural priorities, and institutional

  4. The regional issues involved in the siting of power stations

    International Nuclear Information System (INIS)

    Livingstone, R.

    1980-01-01

    This paper deals with the regional implications of power station siting in England and Wales and refers to the procedures used by the CEGB to find and develop sites. The resources required for a power station are outlined both for conventional and nuclear stations and the possible development of uses for the rejected heat from power stations as a result of the energy crisis is discussed. (U.K.)

  5. SITE: a methodology for assessment of energy facility siting patterns. Regional studies program

    International Nuclear Information System (INIS)

    Frigerio, N.A.; Habegger, L.J.; King, R.F.; Hoover, L.J.; Clark, N.A.; Cobian, J.M.

    1975-08-01

    The timely development of the nation's energy production capacity in a manner that minimizes potential adverse local and regional impacts associated with energy facilities requires the use of sophisticated techniques for evaluation of siting alternatives and fuel cycle options. This report is a documentation of the computerized SITE methodology that has been developed for evaluating health, environmental, and socioeconomic impacts related to utilization of alternate sites for energy production within a region of interest. The cost, impact, and attribute vectors, which are generated and displayed on density maps, can be used in a multiparameter overlay process to identify preferable siting areas. The assessment of clustered facilities in energy centers is also possible within the SITE analysis framework. An application of the SITE methodology to Northern Illinois is presented. Also included is a description of the ongoing extension of SITE for the accumulative evaluation of alternative regional energy siting patterns and fuel cycle options. An appendix provides documentation and user information for the SITE computer program

  6. Toward a regional power plant siting method: AEC-Maryland regional siting factors study, FY 1974 progress report

    International Nuclear Information System (INIS)

    Yaffee, S.L.; Miller, C.A.

    1974-11-01

    The ''AEC-Maryland Regional Siting Factors Study'' examines the process of siting in a regional context. It is developing an analysis method to delineate candidate areas for siting of several power plant technology packages, including both fossil-fueled and nuclear options. Tools that are being used include simulation modeling, economic and demographic forecasting, spatial analysis, and computer graphics and numerical manipulation. The approach will describe the trade-offs incurred if a power plant is located in one candidate area rather than in another. In FY 1974, a suitability analysis method was developed which uses engineering and environmental parameters to define a level of environmental cost incurred if a segment of land is used to site a specific technology package. (U.S.)

  7. Site enforcement tracking system (SETS): PRP listing by site for region 9

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  8. Site enforcement tracking system (SETS): PRP listing by site for region 8

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  9. Site enforcement tracking system (SETS): PRP listing by site for region 10

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  10. Site enforcement tracking system (SETS): PRP listing by site for region 3

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  11. Site enforcement tracking system (SETS): PRP listing by site for region 2

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  12. Site enforcement tracking system (SETS): PRP listing by site for region 5

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  13. Site enforcement tracking system (SETS): PRP listing by site for region 6

    International Nuclear Information System (INIS)

    1993-04-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number

  14. Soil monitoring in Pavlodar region adjoining to Semipalatinsk test site

    International Nuclear Information System (INIS)

    Tuleubaev, B.A.; Ramazanov, Zh.R.; Askarov, E.V.

    2004-01-01

    A problem of territory study and rehabilitation contaminated with man-caused radionuclides is an important task and it has economic, social, and ecology aspects. The problem is crucial for Pavlodar region due to real proximity and to partial location of Semipalatinsk Test Site on its territory. (author)

  15. Siting regions for deep geological repositories. Why just here?

    International Nuclear Information System (INIS)

    Rieser, A.

    2009-09-01

    This report helps to the popularization of the Nagra works accomplished for the management and disposal of the radioactive wastes in Switzerland. The programme for management and disposal of the radioactive wastes are extensively determined by regulations. Protection of mankind and environment is the primary objective. The basic storage process is considered as having been solved. The question addressed in the report is where the facility has to be built; the site selection procedure includes five steps: 1) according to their type the wastes have to be allocated to two different repositories: for low- and intermediate-level wastes (L/ILW), and for high-level and alpha-toxic wastes (HLW); 2) the safety concept for both repositories and the requirements on the geology have to be determined; 3) large suitable geological-tectonic zones must be found where repositories could be built; 4) in these geological zones a suitable host rock has to be identified; 5) the most important spatial geological conditions of the host rock (minimum depth with respect to surface erosion, maximum depth in terms of engineering requirements, lateral extent) have to be identified. Based on these criteria, three suitable siting regions for a HLW repository were found in the North of Switzerland. The preferred host rock is Opalinus clay because of its very low permeability; it is therefore an excellent barrier against nuclide transport. In the three proposed siting regions, Opalinus clay is present in sufficient volumes at a suitable depth. For a L/ILW repository six different possible siting regions were identified, five in Northern Switzerland and one in Central Switzerland. In the three siting regions found for a possible HLW repository, it would also be possible to built a combined repository for both HLW and L/ILW wastes

  16. Screening criteria for siting waste management facilities: Regional Management Plan

    International Nuclear Information System (INIS)

    1986-01-01

    The Midwest Interstate Low-Level Radioactive Waste Commission (Midwest Compact) seeks to define and place into operation a system for low-level waste management that will protect the public health and safety and the environment from the time the waste leaves its point of origin. Once the system is defined it will be necessary to find suitable sites for the components of that waste management system. The procedure for siting waste management facilities that have been chosen by the compact is one in which a host state is chosen for each facility. The host state is then given the freedom to select the site. Sites will be needed of low-level waste disposal facilities. Depending on the nature of the waste management system chosen by the host state, sites may also be needed for regional waste treatment facilities, such as compactors or incinerators. This report provides example criteria for use in selecting sites for low-level radioactive waste treatment and disposal facilities. 14 refs

  17. Value of a regional family practice residency training program site

    Science.gov (United States)

    Fletcher, Sarah; Mullett, Jennifer; Beerman, Steve

    2014-01-01

    Abstract Objective To examine the perceptions of residents, nurses, and physicians about the effect of a regional family practice residency site on the delivery of health services in the community, as well as on the community health care providers. Design Interviews and focus groups were conducted. Setting Nanaimo, BC. Participants A total of 16 residents, 15 nurses, and 20 physicians involved with the family practice residency training program at the Nanaimo site. Methods A series of semistructured interviews and focus groups was conducted. Transcripts of interviews and focus groups were analyzed thematically by the research team. Main findings Overall, participants agreed that having a family practice residency training site in the community contributed to community life and to the delivery of health services in the following ways: increased community capacity and social capital; motivated positive relationships and attitudes in the hospital and community settings; improved communication and teamwork, as well as accessibility and understanding of the health care system; increased the standard of care; and facilitated the recruitment and retention of family physicians. Conclusion This family practice residency training site was beneficial for the community it served. Future planning for distributed medical education sites should take into account the effects of these sites on the health care community and ensure that they continue to be positive influences. Further research in this area could focus on patients’ perceptions of how residency programs affect their care, as well as on the effect of residency programs on wait times and workload for physicians and nurses. PMID:25217693

  18. Structural Fingerprints of Transcription Factor Binding Site Regions

    Directory of Open Access Journals (Sweden)

    Peter Willett

    2009-03-01

    Full Text Available Fourier transforms are a powerful tool in the prediction of DNA sequence properties, such as the presence/absence of codons. We have previously compiled a database of the structural properties of all 32,896 unique DNA octamers. In this work we apply Fourier techniques to the analysis of the structural properties of human chromosomes 21 and 22 and also to three sets of transcription factor binding sites within these chromosomes. We find that, for a given structural property, the structural property power spectra of chromosomes 21 and 22 are strikingly similar. We find common peaks in their power spectra for both Sp1 and p53 transcription factor binding sites. We use the power spectra as a structural fingerprint and perform similarity searching in order to find transcription factor binding site regions. This approach provides a new strategy for searching the genome data for information. Although it is difficult to understand the relationship between specific functional properties and the set of structural parameters in our database, our structural fingerprints nevertheless provide a useful tool for searching for function information in sequence data. The power spectrum fingerprints provide a simple, fast method for comparing a set of functional sequences, in this case transcription factor binding site regions, with the sequences of whole chromosomes. On its own, the power spectrum fingerprint does not find all transcription factor binding sites in a chromosome, but the results presented here show that in combination with other approaches, this technique will improve the chances of identifying functional sequences hidden in genomic data.

  19. Site development in the Central Midwest Compact Region

    International Nuclear Information System (INIS)

    Lash, T.R.

    1986-01-01

    Illinois and Kentucky, the two members of the Central Midwest Interstate Low-Level Radioactive Waste Compact, are well along in fulfilling their responsibility to provide new low-level radioactive waste (LLW) disposal capacity, which has been delegated to states and regions by federal law. The host state for facilities under the compact will be Illinois, and thus the focus of this paper is on Illinois' siting process. Illinois has both the statutory authority for LLW management and a cabinet-level agency, the Illinois Department of Nuclear Safety (IDNS), which has the responsibility for implementing the state management act. Based on activities to date, the Central Midwest Region expects to meet the milestones established by the federal Low-Level Radioactive Waste Policy Amendments Act of 1985. Illinois, however, cannot take further progress toward managing and disposing of our LLW for granted. IDNS and the Central Midwest Compact Commission (CMCC) must continue vigorously to press ahead to assure timely development of new disposal capacity. This paper provides background information on (1) the laws under which new facilities will be established in the Central Midwest Region, (2) the activities of IDNS and CMCC, and (3) planned activities by both IDNS and the CMCC

  20. Lunar heat flow: Regional prospective of the Apollo landing sites

    Science.gov (United States)

    Siegler, M. A.; Smrekar, S. E.

    2014-01-01

    reexamine the Apollo Heat Flow Experiment in light of new orbital data. Using three-dimensional thermal conduction models, we examine effects of crustal thickness, density, and radiogenic abundance on measured heat flow values at the Apollo 15 and 17 sites. These models show the importance of regional context on heat flux measurements. We find that measured heat flux can be greatly altered by deep subsurface radiogenic content and crustal density. However, total crustal thickness and the presence of a near-surface radiogenic-rich ejecta provide less leverage, representing only minor (<1.5 mW m-2) perturbations on surface heat flux. Using models of the crust implied by Gravity Recovery and Interior Laboratory results, we found that a roughly 9-13 mW m-2 mantle heat flux best approximate the observed heat flux. This equates to a total mantle heat production of 2.8-4.1 × 1011 W. These heat flow values could imply that the lunar interior is slightly less radiogenic than the Earth's mantle, perhaps implying that a considerable fraction of terrestrial mantle material was incorporated at the time of formation. These results may also imply that heat flux at the crust-mantle boundary beneath the Procellarum potassium, rare earth element, and phosphorus (KREEP) Terrane (PKT) is anomalously elevated compared to the rest of the Moon. These results also suggest that a limited KREEP-rich layer exists beneath the PKT crust. If a subcrustal KREEP-rich layer extends below the Apollo 17 landing site, required mantle heat flux can drop to roughly 7 mW m-2, underlining the need for future heat flux measurements outside of the radiogenic-rich PKT region.

  1. Bioinformatic Analysis of Deleterious Non-Synonymous Single Nucleotide Polymorphisms (nsSNPs in the Coding Regions of Human Prion Protein Gene (PRNP

    Directory of Open Access Journals (Sweden)

    Kourosh Bamdad

    2016-12-01

    Full Text Available Background & Objective: Single nucleotide polymorphisms are the cause of genetic variation to living organisms. Single nucleotide polymorphisms alter residues in the protein sequence. In this investigation, the relationship between prion protein gene polymorphisms and its relevance to pathogenicity was studied. Material & Method: Amino acid sequence of the main isoform from the human prion protein gene (PRNP was extracted from UniProt database and evaluated by FoldAmyloid and AmylPred servers. All non-synonymous single nucleotide polymorphisms (nsSNPs from SNP database (dbSNP were further analyzed by bioinformatics servers including SIFT, PolyPhen-2, I-Mutant-3.0, PANTHER, SNPs & GO, PHD-SNP, Meta-SNP, and MutPred to determine the most damaging nsSNPs. Results: The results of the first structure analyses by FoldAmyloid and AmylPerd servers implied that regions including 5-15, 174-178, 180-184, 211-217, and 240-252 were the most sensitive parts of the protein sequence to amyloidosis. Screening all nsSNPs of the main protein isoform using bioinformatic servers revealed that substitution of Aspartic acid with Valine at position 178 (ID code: rs11538766 was the most deleterious nsSNP in the protein structure. Conclusion:  Substitution of the Aspartic acid with Valine at position 178 (D178V was the most pathogenic mutation in the human prion protein gene. Analyses from the MutPred server also showed that beta-sheets’ increment in the secondary structure was the main reason behind the molecular mechanism of the prion protein aggregation.

  2. Regional-to-site scale groundwater flow in Romuvaara

    Energy Technology Data Exchange (ETDEWEB)

    Kattilakoski, E.; Koskinen, L. [VTT Energy, Espoo (Finland)

    1999-04-01

    The work describing numerical groundwater flow modelling at the Romuvaara site serves as a background report for the safety assessment TILA-99. The site scale can roughly be taken as the scale of detailed borehole investigations, which have probed the bedrock of Romuvaara over about 2 km{sup 2} large and 1 km deep volume. The site model in this work covers an area of about 12 km{sup 2}. The depth of the model is 2200 m. The site scale flow modelling produced characteristics of the deep groundwater flow and evaluated the impact of a spent fuel repository on the natural groundwater flow conditions. It treated the hydraulic gradient in the intact rock between the repository and the fracture zone nearest to it (about 50 m off) for the block scale model, which describes the groundwater flow on the repository scale. The result quantities were the hydraulic head h (as the base quantity) and its gradient in selected cross sections and fracture zones, the flow rates around the repository, flow paths and discharge areas of the water from the repository. Two repository layouts were discussed. The numerical simulations were performed with the FEFTRA code based on the porous medium concept and the finite element method. The regional model with a no-flow boundary condition at the bottom and on the lateral edges was firstly used to confirm the hydraulic head boundary condition on the lateral edges of an interior site model (having a no-flow boundary condition at the bottom). The groundwater table was used as the hydraulic head boundary condition at the surface of each model. Both the conductivity of the bedrock (modeled with three-dimensional elements) and the transmissivities of the fracture zones (described with two-dimensional elements in the three-dimensional mesh) decreased as a function of the depth. All the results were derived from the site model. The range of variation of the hydraulic gradient immediately outside the repository was studied in the direction of the flow

  3. Regional-to-site scale groundwater flow in Kivetty

    Energy Technology Data Exchange (ETDEWEB)

    Kattilakoski, E. [VTT Energy, Espoo (Finland); Meszaros, F. [The Relief Laboratory, Harskut (Hungary)

    1999-04-01

    The work describing numerical groundwater flow modelling at the Kivetty site serves as a background report for the safety assessment TILA-99. The site scale can roughly be taken as the scale of detailed borehole investigations, which have probed the bedrock of Kivetty over about 3 km{sup 2} large and 1 km deep volume. The site model in this work covers an area of about 16 km{sup 2}. The depth of the model is 2000 m. The site scale flow modelling produced characteristics of the deep groundwater flow both under the natural conditions and in the case of a spent fuel repository. The hydraulic gradient in the intact rock between the repository and the fracture zone nearest to it (about 50 m off) was assessed for the block scale model. The result quantities were the hydraulic head h (as the base quantity) and its gradient in selected cross sections and fracture zones, the flow rates around the repository, flow paths and discharge areas of the water from the repository. Two repository layouts were discussed. The numerical simulations were performed with the FEFTRA code based on the porous medium concept and the finite element method. The regional model with a no-flow boundary condition at the bottom and on the lateral edges was firstly used to confirm the hydraulic head boundary condition on the lateral edges of an interior site model (having a no-flow boundary condition at the bottom). The groundwater table was used as the hydraulic head boundary condition at the surface of each model. Both the conductivity of the bedrock (modeled with three-dimensional elements) and the transmissivities of the fracture zones (described with two-dimensional elements in the three-dimensional mesh) decreased as a function of the depth. All the results were derived from the site model. With the exception of the western part of Repository A the outlined repositories are located underneath Kumpuvuori, where the flow has a significant subvertical component. The horizontal component of the deep

  4. Regional-to-site scale groundwater flow in Kivetty

    International Nuclear Information System (INIS)

    Kattilakoski, E.; Meszaros, F.

    1999-04-01

    The work describing numerical groundwater flow modelling at the Kivetty site serves as a background report for the safety assessment TILA-99. The site scale can roughly be taken as the scale of detailed borehole investigations, which have probed the bedrock of Kivetty over about 3 km 2 large and 1 km deep volume. The site model in this work covers an area of about 16 km 2 . The depth of the model is 2000 m. The site scale flow modelling produced characteristics of the deep groundwater flow both under the natural conditions and in the case of a spent fuel repository. The hydraulic gradient in the intact rock between the repository and the fracture zone nearest to it (about 50 m off) was assessed for the block scale model. The result quantities were the hydraulic head h (as the base quantity) and its gradient in selected cross sections and fracture zones, the flow rates around the repository, flow paths and discharge areas of the water from the repository. Two repository layouts were discussed. The numerical simulations were performed with the FEFTRA code based on the porous medium concept and the finite element method. The regional model with a no-flow boundary condition at the bottom and on the lateral edges was firstly used to confirm the hydraulic head boundary condition on the lateral edges of an interior site model (having a no-flow boundary condition at the bottom). The groundwater table was used as the hydraulic head boundary condition at the surface of each model. Both the conductivity of the bedrock (modeled with three-dimensional elements) and the transmissivities of the fracture zones (described with two-dimensional elements in the three-dimensional mesh) decreased as a function of the depth. All the results were derived from the site model. With the exception of the western part of Repository A the outlined repositories are located underneath Kumpuvuori, where the flow has a significant subvertical component. The horizontal component of the deep

  5. Managing soil moisture on waste burial sites in arid regions

    International Nuclear Information System (INIS)

    Anderson, J.E.; Ratzlaff, T.D.; Nowak, R.S.; Markham, O.D.

    1993-01-01

    In semiarid regions, where potential evapotranspiration greatly exceeds precipitation, it is theoretically possible to preclude water form reaching interred wastes by (i) providing a sufficient cap of soil to store precipitation that falls while plants are dormant and (ii) establishing sufficient plant cover to deplete soil moisture during the growing season, thereby emptying the water storage reservoir of the soil. Here the authors discuss the theory and rationale for such an approach and then present the results of a field study to test its efficacy at the Idaho National Engineering Laboratory (INEL). They examined the capacity of four species of perennial plants to deplete soil moisture on simulated waste trenches and determined the effective water storage capacity of the soil. Those data enabled them to estimate the minimum depth of fill soil required to prevent deep drainage. Any of the species studied can use all of the plant-available soil water, even during a very wet growing season. The water storage capacity of the soil studied is 17% by volume, so a trench cap of 1.6 m of soil should be adequate to store precipitation received at the INEL while plants are dormant. They recommend a fill soil depth of 2 m to provide a margin of safety in case water accumulates in local areas as a result of heavy snow accumulation, subsidence, or runoff. Fill soil requirements and choice of plant species will vary, but the concepts and general approach are applicable to other shallow land burial sites in arid or semiarid regions. 23 refs., 5 figs

  6. Network Screening for Smarter Road Sites: A Regional Case

    Directory of Open Access Journals (Sweden)

    Attila Grieco

    2014-05-01

    Full Text Available Road safety has been a main societal and policy issue in many European countries since the early years of last decade. After the 2000-2010 Road Safety Programme launched by the European Commission, in 2011 the Commission adopted the new 2020 programme, even more demanding than the previous. As the societal consequences of road casualties are increasingly perceived as a core dimension of smart mobility, road safety system is now facing new challenges. Current mobility shifts to softer and greener transportation means raise new safety concerns for an increasingly larger share of vulnerable road users. The need to integrate road safety requirements with other residential, mobility, and environmental policies calls for a more detailed understanding of the phenomenon at different spatial levels and with different observation lenses. The pilot study described in this paper is a contribution to this end. It aims at identifying the accident prone sites of the regional road network to help prioritizing safety interventions, by the regional administration having road planning responsibilities. The study develops a screening approach to select hazardous road locations, outside urban premises, from the Piedmont provincial and state roads. The most recent data for the 2010-2012 years were considered, drawn from the ISTAT road accident database, managed by the CMRSS. The procedure consists of the following steps: identification of the elementary road sections to be screened, through a GIS analysis; definition of the screening groups (road sections have been subdivided in 4 length classes; definition of the selection criteria, with two severity thresholds based on the crash density; classification of the elementary road sections by severity thresholds.

  7. Synonymous genes explore different evolutionary landscapes.

    Directory of Open Access Journals (Sweden)

    Guillaume Cambray

    2008-11-01

    Full Text Available The evolutionary potential of a gene is constrained not only by the amino acid sequence of its product, but by its DNA sequence as well. The topology of the genetic code is such that half of the amino acids exhibit synonymous codons that can reach different subsets of amino acids from each other through single mutation. Thus, synonymous DNA sequences should access different regions of the protein sequence space through a limited number of mutations, and this may deeply influence the evolution of natural proteins. Here, we demonstrate that this feature can be of value for manipulating protein evolvability. We designed an algorithm that, starting from an input gene, constructs a synonymous sequence that systematically includes the codons with the most different evolutionary perspectives; i.e., codons that maximize accessibility to amino acids previously unreachable from the template by point mutation. A synonymous version of a bacterial antibiotic resistance gene was computed and synthesized. When concurrently submitted to identical directed evolution protocols, both the wild type and the recoded sequence led to the isolation of specific, advantageous phenotypic variants. Simulations based on a mutation isolated only from the synthetic gene libraries were conducted to assess the impact of sub-functional selective constraints, such as codon usage, on natural adaptation. Our data demonstrate that rational design of synonymous synthetic genes stands as an affordable improvement to any directed evolution protocol. We show that using two synonymous DNA sequences improves the overall yield of the procedure by increasing the diversity of mutants generated. These results provide conclusive evidence that synonymous coding sequences do experience different areas of the corresponding protein adaptive landscape, and that a sequence's codon usage effectively constrains the evolution of the encoded protein.

  8. The Clinch Bend Regional Industrial Site and economic development opportunities

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-12-31

    This effort focuses initially on the Clinch Bend site. Other sites and developable tracts of land are identified with the assistance of communities in proximity to Oak Ridge, the State of Tennessee, and others, and compared with the projected site requirements for large industrial facilities.

  9. Integration of a working site in its regional context

    International Nuclear Information System (INIS)

    Couture, J.

    1986-01-01

    This paper shows how a local representative has felt the decision of construction of the Paluel nuclear power plant and the problems involved, and how it has been tried to resolve them: insertion in the site, reception of the population of this big working site [fr

  10. At site and regional analysis of maximum annual and seasonal discharges and precipitation depths in the upper Hron region

    International Nuclear Information System (INIS)

    Kohnova, S.; Hlavcova, K.

    2004-01-01

    In this presentation authors deal with the regional analysis of maximum annual and seasonal discharges and precipitation depths in the upper Hron region (Slovak Republic). This work has two objectives: (1) At site and regional analysis of annual and seasonal maximum design discharges in the upper Hron region; (2) Analysis of annual and seasonal maximum design precipitations in the connection of extreme runoff condition in the upper Hron region

  11. Site study plan for regional hydrologic sampling and monitoring: Preliminary draft

    International Nuclear Information System (INIS)

    Dutton, A.R.

    1987-01-01

    The purpose of the Regional Hydrologic Studies Plan is to describe those field activities required for completion of the objectives of hydrologic activities. Many of these activities are regional in scope and are designed to provide a framework for understanding the hydrologic setting of the site and the hydrologic processes that influence site characteristics. Site Study Plans (SSPs) define activates at and in the immediate vicinity of the site. The activities specified in the Regional Hydrologic Studies Plan are performed beyond the confines of the site because the hydrologic systems extend beyond the site boundaries, because pertinent data that bear on site suitability are available outside of the site, and because natural analogues exist outside of the site that allow analysis of processes that are expected to operate within the site. 15 refs., 5 figs., 1 tab

  12. Regional flow duration curves for ungauged sites in Sicily

    Directory of Open Access Journals (Sweden)

    F. Viola

    2011-01-01

    Full Text Available Flow duration curves are simple and powerful tools to deal with many hydrological and environmental problems related to water quality assessment, water-use assessment and water allocation. Unfortunately the scarcity of streamflow data enables the use of these instruments only for gauged basins. A regional model is developed here for estimating flow duration curves at ungauged basins in Sicily, Italy. Due to the complex ephemeral behavior of the examined region, this study distinguishes dry periods, when flows are zero, from wet periods using a three parameters power law to describe the frequency distribution of flows. A large dataset of streamflows has been analyzed and the parameters of flow duration curves have been derived for about fifty basins. Regional regression equations have been developed to derive flow duration curves starting from morphological basin characteristics.

  13. Mining and geologic site investigation of Minas de Corrales region

    International Nuclear Information System (INIS)

    Arrighetti, R.; Pena, S.; Rossi, P.; Vaz Chavez, N.

    1981-01-01

    The present geologic article integrates the Mining inventory Program that was carried out in our country, with the participation of the 8.R.G.M. (France) and the Institute Geologic of the Uruguay. The main area which the work was developed it was object of gold exploration and exploitation from ends of the passed century. It was located in the region of Cunapiru-Vichadero (Rivera province), which it was still called from a geologic point of view, The Crystalline Island .

  14. Working group 4b: Regional aspects. Siting in Walloon region and offshore

    International Nuclear Information System (INIS)

    Wilmes, Ph.; Fincoeur, P.; Slegers, G.

    1976-01-01

    Four nuclear power plant solutions in view of siting have been considered. a) Saturation of the existing sites. The only site considered is Tihange where a 870 MWe power plant is operated and a 930 MWe is under construction. b) Creation of new sites only for the production of electrical power and/or thermal energy. There are two possibilities: the creation of a new site for big power stations on the Meuse river and the spreading of power plants of two kinds: supply of electricity only and double purpose production: vapor/electricity or heat/electricity. c) Creation of complete sites for the transformation of nuclear material: enrichment of fissile material; fuel elements fabrication, burning, spent fuel reprocessing and waste management. d) Off-shore power plant siting and the creation of an artificial island. (A.F.)

  15. Regional State Committees Can Help Provide a Regional Perspective to Planning and Siting Decisions, Reducing the Need for Federal Preemption

    Energy Technology Data Exchange (ETDEWEB)

    Basheda, Gregory

    2006-03-01

    The Energy Policy Act of 2005 gave FERC the authority to preempt state and local transmission siting authorities under certain conditions, creating the potential for federal/state disputes. Such disputes are less likely to occur where there are open, regional planning processes. Multi-state advisory bodies known as regional state committees, working with RTOs, can provide a forum to evaluate transmission needs from a regional perspective, reducing the need for FERC involvement. (author)

  16. Superfund Removal Site Points, Region 9, 2012, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — Point geospatial dataset representing locations of CERCLA (Superfund) Removal sites. CERCLA (Comprehensive Environmental Response, Compensation, and Liability Act)...

  17. Site specific transfer factor studies for Kaiga region

    International Nuclear Information System (INIS)

    Karunakara, N.

    2012-01-01

    The Radioecology Laboratory of University Science Instrumentation Centre, Mangalore University is engaged in frontline research studies on different aspects of environmental radioactivity and radiation protection for the last 20 years. Extensive studies have been carried out on radiation levels, radionuclides distribution, and transfer of radionuclides through terrestrial, aquatic and atmospheric pathways in the environment of West Coast of India including the Kaiga nuclear power plant. The baseline studies on radioactivity levels around Kaiga region was carried out well before the nuclear power plant became operational and the data generated under these studies are considered to be highly valuable for future impact assessments. The nuclear power plant became operational in the year 1999 and since then this laboratory is involved in radiological impact assessment studies around the nuclear power plant. Detailed Kaiga specific studies are now ongoing to estimate the transfer factors and transfer coefficients for radionuclides for different pathways, such as, (i) soil to rice (ii) soil to different types of vegetables (iii) water/sediment to fish (iv) soil to grass (v) grass to cow milk and (vi) milk to child. For these studies, rice and vegetable fields were developed very close to the nuclear power plant in Kaiga to study the transfer of radionuclides. The water required for this field was drawn from coolant water discharge canal of the power plant. Rice and different types of vegetables were grown in the experimental fields in different seasons of the year and the uptake of radionuclides was studied. For a comparative study, rice and vegetables were also collected from the fields of farmers of nearby villages and analysed. The transfer of artificial radionuclides through pathway involving cow milk was also studied in detail. A grass field was developed and cows were adopted specifically for this study. The cows were allowed to graze freely in this grass field

  18. About the nature of regional thermal anomaly in the Semipalatinsk Test Site region revealed basing on remote space sensing data

    International Nuclear Information System (INIS)

    Melent'ev, M.I.; Velikanov, A.E.

    2003-01-01

    A thermal anomaly, (more than 20,000 sq. km) discovered in the Semipalatinsk Test Site region in the pictures from space, is observed every year on certain days mainly in winter-spring season. Appearance of the thermal anomaly often coincides with days of intensive fall of atmospheric precipitation and possible thawing of snow cover together with decreasing of ozone concentration in atmosphere. The explanation of thermal anomaly in the Semipalatinsk Test Site region due to nuclear reaction caused by the energy of radionuclide radioactive decay deposited in a soil layer after ground and air nuclear explosions and radiolysis processes in soil solutions is given in this article. (author)

  19. Economic impact of accelerated cleanup on regions surrounding the US DOE's major nuclear weapons sites

    International Nuclear Information System (INIS)

    Greenberg, M.; Solitare, L.; Frisch, M.; Lowrie, K.

    1999-01-01

    The regional economic impacts of the US Department of Energy's accelerated environmental cleanup plan are estimated for the major nuclear weapons sites in Colorado, Idaho, New Mexico, South Carolina, Tennessee, and Washington. The analysis shows that the impact falls heavily on the three relatively rural regions around the Savannah River (SC), Hanford (WA), and Idaho National Engineering and Environmental Laboratory (ID) sites. A less aggressive phase-down of environmental management funds and separate funds to invest in education and infrastructure in the regions helps buffer the impacts on jobs, personal income, and gross regional product. Policy options open to the federal and state and local governments are discussed

  20. Population Health in Regions Adjacent to the Semipalatinsk Nuclear Test Site

    National Research Council Canada - National Science Library

    1998-01-01

    ...) of the Union of Soviet Socialist Republics (USSR). Inhabitants of several Kazakhstan regions were contaminated in different years by radioactive fallout from atmospheric nuclear tests at the Semipalatinsk test site...

  1. Evaluating the adequacy of a reference site pool for ecological assessments in environmentally complex regions

    Science.gov (United States)

    Ode, Peter R.; Rehn, Andrew C.; Mazor, Raphael D.; Schiff, Kenneth C.; Stein, Eric D.; May, Jason; Brown, Larry R.; Herbst, David B.; Gillette, D.D.; Lunde, Kevin; Hawkins, Charles P.

    2016-01-01

    Many advances in the field of bioassessment have focused on approaches for objectively selecting the pool of reference sites used to establish expectations for healthy waterbodies, but little emphasis has been placed on ways to evaluate the suitability of the reference-site pool for its intended applications (e.g., compliance assessment vs ambient monitoring). These evaluations are critical because an inadequately evaluated reference pool may bias assessments in some settings. We present an approach for evaluating the adequacy of a reference-site pool for supporting biotic-index development in environmentally heterogeneous and pervasively altered regions. We followed common approaches for selecting sites with low levels of anthropogenic stress to screen 1985 candidate stream reaches to create a pool of 590 reference sites for assessing the biological integrity of streams in California, USA. We assessed the resulting pool of reference sites against 2 performance criteria. First, we evaluated how well the reference-site pool represented the range of natural gradients present in the entire population of streams as estimated by sites sampled through probabilistic surveys. Second, we evaluated the degree to which we were successful in rejecting sites influenced by anthropogenic stress by comparing biological metric scores at reference sites with the most vs fewest potential sources of stress. Using this approach, we established a reference-site pool with low levels of human-associated stress and broad coverage of environmental heterogeneity. This approach should be widely applicable and customizable to particular regional or programmatic needs.

  2. Low-level radioactive waste facility siting in the Rocky Mountain compact region

    International Nuclear Information System (INIS)

    Whitman, M.

    1983-09-01

    The puprose of the Rocky Mountain Low-Level Radioactive Waste Compact is to develop a regional management system for low-level waste (LLW) generated in the six states eligible for membership: Arizona, Colorado, Nevada, New Mexico, Utah and Wyoming. Under the terms of the compact, any party state generating at least 20% of the region's waste becomes responsible for hosting a regional LLW management facility. However, the compact prescribes no system which the host state must follow to develop a facility, but rather calls on the state to fulfill its responsibility through reliance on its own laws and regulations. Few of the Rocky Mountain compact states have legislation dealing specifically with LLW facility siting. Authority for LLW facility siting is usually obtained from radiation control statutes and solid or hazardous waste statutes. A state-by-state analysis of the siting authorities of each of the Rock Mountain compact states as they pertain to LLW disposal facility siting is presented. Siting authority for LLW disposal facilities in the Rocky Mountain compact region runs from no authority, as in Wyoming, to general statutory authority for which regulations would have to be promulgated, as in Arizona and Nevada, to more detailed siting laws, as in Colorado and New Mexico. Barring an amendment to, or different interpretation of, the Utah Hazardous Waste Facility Siting Act, none of the Rocky Mountain States' LLW facility siting authorities preempt local veto authorities

  3. A Comparison of Regional and SiteSpecific Volume Estimation Equations

    Science.gov (United States)

    Joe P. McClure; Jana Anderson; Hans T. Schreuder

    1987-01-01

    Regression equations for volume by region and site class were examined for lobiolly pine. The regressions for the Coastal Plain and Piedmont regions had significantly different slopes. The results shared important practical differences in percentage of confidence intervals containing the true total volume and in percentage of estimates within a specific proportion of...

  4. Regional siting survey for thermal power plants in the state of Ohio

    International Nuclear Information System (INIS)

    Elkins, M.L.; DiNunno, J.J.

    1975-01-01

    The selection and evaluation of sites for power plants have become increasingly difficult in recent years as pressures from various societal segments have resulted in government restraints on selection and burning of fossil fuels, on methods of heat dissipation, on acquisition of transmission line rights-of-way, and on environmental impact in general. The key elements in successful application of power plant siting technology are the development of the proper balance among the basic siting considerations and the understanding that level of detail in a study varies in an inverse relationship with the siting area under examination. As the first step in the process of selection and eventual licensing of new thermal power plant sites for a utility in the State of Ohio, the entire state was screened to determine promising candidate regions large enough to offer several possible candidate sites for thermal power plants. Because of the size of the area under consideration and the advantages of developing sites with an ultimate capacity for more than one power plant, sites with an installed capacity of 1100 to 4400 MW(e) were considered for this study. As a result of the preliminary screening conducted in four distinct steps, three candidate regions showed the best overall promise for either nuclear or fossil-fueled power plant development. Tentative identification was made of candidate sites within these candidate regions, and follow-on studies conducted in an increasing level of detail are presently in progress to determine the candidate site(s) most promising for power plant siting. (U.S.)

  5. Nuclear scaffold attachment sites within ENCODE regions associate with actively transcribed genes.

    Directory of Open Access Journals (Sweden)

    Mignon A Keaton

    2011-03-01

    Full Text Available The human genome must be packaged and organized in a functional manner for the regulation of DNA replication and transcription. The nuclear scaffold/matrix, consisting of structural and functional nuclear proteins, remains after extraction of nuclei and anchors loops of DNA. In the search for cis-elements functioning as chromatin domain boundaries, we identified 453 nuclear scaffold attachment sites purified by lithium-3,5-iodosalicylate extraction of HeLa nuclei across 30 Mb of the human genome studied by the ENCODE pilot project. The scaffold attachment sites mapped predominately near expressed genes and localized near transcription start sites and the ends of genes but not to boundary elements. In addition, these regions were enriched for RNA polymerase II and transcription factor binding sites and were located in early replicating regions of the genome. We believe these sites correspond to genome-interactions mediated by transcription factors and transcriptional machinery immobilized on a nuclear substructure.

  6. Valuation procedure for supra-regional siting of nuclear power plants

    International Nuclear Information System (INIS)

    Volwahsen, A.

    1977-01-01

    The entwinement of area planning and power policies is explained and conceivable effects of the selection of site for nuclear power stations on the regional economic and social structure as well as the housing development are discussed. A research project and its purposes are presented here, the project having been initiated in order to examine the siting concepts emerging from the discussion of deverging interests, and in order to elaborate a variety of concrete requirements to be made with regard to site examination and site selection. Large-scole valuation indicators and procedures are expected to lead to solutions acceptable for all parties concerned. (HP) 891 HP [de

  7. NPP Siting in Western Part of Java Island Indonesia: Regional Analysis Stage

    International Nuclear Information System (INIS)

    Sastratenaya, A.S.; Yuliastuti

    2011-01-01

    Full text of publication follows: Considering that Banten and West Java Provinces are dense regions of industry, therefore they require a large amount of electricity. Nuclear power plant is one option to be considered to anticipate the future electricity demand. To support the program, it is needed to look for some potential locations through NPP siting. The siting should meet the requirement of safety, safety aspects of the natural external events, human induced external events, public and environmental safety. Site selection is performed in several stages, where each stage has specific assessment criteria. Siting is commenced with pre-survey activity to obtain several interest areas, the activity covers a wide area but the used data is very limited and only apply general criteria. The following activities after pre survey are site survey consisting of (1) regional analysis, (2) site screening, and (3) comparison and ranking stages. The objective of regional analysis is to obtain potential sites in the study area of 150 km radius from each interest area by using both general and specific criteria. The potential sites then screened to obtain selected candidate sites by using more detailed secondary data as well as survey activities such as geophysical investigation, a few of drilling, etc., within the radius of 50 km from each potential site. All the selected candidate sites are then compared and ranked to obtain preferred candidate site. Site evaluation is the next step to evaluate all site-specific parameter to obtain design basis parameters and as the basis for preparing site permit document. This paper presents the methodology and result of regional analysis stage. The objective of the activity is to obtain potential sites in the north coast of West Java and Banten Provinces by considering fourteen study aspects which could be categorize into safety related aspects, non-safety related aspect and public education. However, this paper only considers the safety

  8. Reconnaissance of Archaeological Sites at Tuzkhormato Region Saladdin Governorate – Northern Iraq

    Directory of Open Access Journals (Sweden)

    Salman Z. Khorshid

    2018-05-01

    Full Text Available This study is talking for the first time about in this region to document the archaeological sites at Tuzkhormato and surroundings. There are more than (19 archaeological sites which took two trends  one of them is parallel to Aq-Su river, which starts from behind Tuzkhomato mountain and takes NE-SW direction at Shirash Tapa site and ending at Zeghaitoon river near the bridge of (Tikrit-Tuz road, and another trend is perpendicular to the first one at about the mid-way distance of the first trend. Coordinations of (5 archaeological sites were located and studied, these sites are as a hill ranges in its shape between small to large and the broken pottery were spread widely on the surface of these sites and some of this pottery are colored, also there are chert cutter that is used as knives (at Tal-Al-Shaer site only. These sites were uplifted from the surface level with uneven degree depending on the volume of the buildings at that site, and all the buildings were built from muds, so these buildings are weak to resist the climate. It is probable that all buildings were buried under these sites, and the destroyed pottery of pre-Islamic period was distributed over the archaeological sites. Only one site on the Tuzkhormato mountain built with blaster and gypsum rocks, this site is (Gawor Qalasi which from (Sassanian period. All these sites still are not studied geologically or geophysically for determination the ages of these sites or delineating the geometrical shapes of buried buildings or searching some of the precious things like gold or other things.

  9. Synonymy and synonyms in Lexicography

    DEFF Research Database (Denmark)

    Bergenholtz, Henning; Gouws, Rufus

    2012-01-01

    In this paper we work with the assumption that items giving synonyms in dictionaries are primarily of assistance in the case of text production problems. We assume furthermore that synonymy does not prevail between lexemes but rather between textual items in concrete texts. Accordingly a rich...... selection of synonyms in text production dictionaries will offer the possibility to select the appropriate item – but only for mother-tongue speakers. We are not discussing items giving synonyms in learners' dictionaries and school dictionaries. From a selection of existing dictionaries it shows, as could...... be expected, that there is no uniform lexicographic practice but also numerous ways of dealing with synonyms that offers very little assistance to the intended target users of a specific dictionary. This could be due to the fact that too often the inclusion and presentation of synonyms are done without taking...

  10. Nuclear event time histories and computed site transfer functions for locations in the Los Angeles region

    Science.gov (United States)

    Rogers, A.M.; Covington, P.A.; Park, R.B.; Borcherdt, R.D.; Perkins, D.M.

    1980-01-01

    This report presents a collection of Nevada Test Site (NTS) nuclear explosion recordings obtained at sites in the greater Los Angeles, Calif., region. The report includes ground velocity time histories, as well as, derived site transfer functions. These data have been collected as part of a study to evaluate the validity of using low-level ground motions to predict the frequency-dependent response of a site during an earthquake. For this study 19 nuclear events were recorded at 98 separate locations. Some of these sites have recorded more than one of the nuclear explosions, and, consequently, there are a total of 159, three-component station records. The location of all the recording sites are shown in figures 1–5, the station coordinates and abbreviations are given in table 1. The station addresses are listed in table 2, and the nuclear explosions that were recorded are listed in table 3. The recording sites were chosen on the basis of three criteria: (1) that the underlying geological conditions were representative of conditions over significant areas of the region, (2) that the site was the location of a strong-motion recording of the 1971 San Fernando earthquake, or (3) that more complete geographical coverage was required in that location.

  11. Common data about region of the former Semipalatinsk test site. Chapter 2

    International Nuclear Information System (INIS)

    1998-01-01

    Region of the Semipalatinsk test site is situated on left bank shore of the Irtysh river, on joining of three regions (East Kazakstan region, Pavlodar, Karaganda) and is extended from the river to south-western direction on 180 km. Total square of the site is amount 18.5 thousand sq.km. The territory is presented by flat landscape of dry steppe and semi-desert type passing in south-western direction into hill valley changing by small hill land. There are 5 test sites on territory of the region where places of nuclear explosions were carried out. For all territory is typically presence of river valleys and lake hollows (mainly salty). Today global background from cesium-137 and strontium-90 radionuclides near Semipalatinsk city amounts in average 0,11 Ci/sq.km. By the data of ground gamma-survey radiation background is oscillating within limits of 11-25 μR/h. In the same time on the site region there are local sections of radiation contamination with very high background, in particular, in epicenter of the 'Opytnoe Pole' area is up to 15000 μR/h, on disposal area of the Balapan lake is 11000 μR/h, near dam of the Shagan reservoir is up to 7000 μR/h, near portals of some galleries of the Degelen test site is up to 20000-250000 μR/h and others. Geobotanic status of the site territory is extremely heterogeneous and it is insufficiently studied because of inaccessibility of the region for researches during long time of its activity. The 302 types higher vascular plants were defined during last four seasons of field studies, as well as 800 descriptions of biocenoses are made, 1000 herbarium specimens are gathered

  12. Experimental Studies on Earthen Architecture Sites Consolidated with BS Materials in Arid Regions

    Directory of Open Access Journals (Sweden)

    Dong Zhao

    2016-01-01

    Full Text Available This paper takes the preservation works on the archaeological sites of Gaochang Ruins, Xinjiang, as background. Based on the soil characteristics analysis on the archaeological sites, experimental studies were conducted on the consolidation effect of the BS-10 consolidation material on the archaeological sites of adobe and rammed earth. The results showed the following:, after consolidation, the wind erosion resistance of the soil on the archaeological sites was substantially increased, and the wind erosion modulus was reduced by 5~8 times; the soil exhibited fine grid structure and significantly reduced degree of permeability, while still maintaining the moisture exchange between inside and outside the soil; there is excellent ageing resistance; the resistance to freezing and thawing was closely related to the soil water content and had little influence in arid regions; the water resistance was improved and could satisfy the requirements for consolidating the sites in arid regions; the unconfined compressive strength was improved moderately, which was the key direction of improvement in the future, and the consolidated soil did not form duricrust on the surface and had good bonding strength with the internal parts. The BS-10 material can meet the consolidation requirements for the earthen archaeological sites in arid regions of northwest China.

  13. Public participation and regional development at a nuclear waste disposal site

    International Nuclear Information System (INIS)

    Ipsen, D.

    2005-01-01

    The propositions brought forward in this article try to implement sociological aspects into the search for nuclear waste disposal sites based on two theses: Firstly without the willingness of public participation in the search and inspection processes the success of the process is severly put into question in a democratic state. Secondly the potential disposal site must not block the further economic development of the region. These two theses lead to socio-economic criteria for consideration or debarment, to a concept of active and intensive participation, and to considerations about long-term regional development. (orig.)

  14. Site and Regional Data for Biosphere Assessment BSA-2009 Supplement to Olkiluoto Biosphere Description 2009

    International Nuclear Information System (INIS)

    Aro, L.; Haapanen, R.; Puhakka, L.; Hjerpe, T.; Kirkkala, T.; Koivunen, S.; Lahdenperae, A.-M.; Salo, T.; Ikonen, A.T.K.; Helin, J.

    2010-06-01

    The safety case for a spent nuclear fuel repository at Olkiluoto includes a computational safety assessment. A site-specific biosphere assessment is an integral part of them both. In 2009 an assessment was conducted to demonstrate preparedness to apply for construction license to the repository in 2012. As a part of the biosphere assessment, the present conditions at the site are described in Olkiluoto biosphere description report for an analogue of the future conditions being simulated in the safety assessment. This report is a supplement to the biosphere description report of 2009 and documents the site and regional data used in the biosphere assessment 'BSA-2009' with respective rationales. (orig.)

  15. Assessment of Natural Stream Sites for Hydroelectric Dams in the Pacific Northwest Region

    Energy Technology Data Exchange (ETDEWEB)

    Douglas G. Hall; Kristin L. Verdin; Randy D. Lee

    2012-03-01

    This pilot study presents a methodology for modeling project characteristics using a development model of a stream obstructing dam. The model is applied to all individual stream reaches in hydrologic region 17, which encompasses nearly all of Idaho, Oregon, and Washington. Project site characteristics produced by the modeling technique include: capacity potential, principal dam dimensions, number of required auxiliary dams, total extent of the constructed impoundment boundary, and the surface area of the resulting reservoir. Aggregated capacity potential values for the region are presented in capacity categories including total, that at existing dams, within federal and environmentally sensitive exclusion zones, and the balance which is consider available for greenfield development within the limits of the study. Distributions of site characteristics for small hydropower sites are presented and discussed. These sites are screened to identify candidate small hydropower sites and distributions of the site characteristics of this site population are presented and discussed. Recommendations are made for upgrading the methodology and extensions to make the results more accessible and available on a larger scale.

  16. Five new synonyms in Epimedium ( Berberidaceae ) from China

    OpenAIRE

    Zhang, Yanjun; Dang, Haishan; Li, Shengyu; Li, Jianqiang; Wang, Ying

    2015-01-01

    Abstract Five new synonyms in Chinese Epimedium are designated in the present paper. Epimedium chlorandrum is treated as a synonym of Epimedium acuminatum ; Epimedium rhizomatosum as a synonym of Epimedium membranaceum ; Epimedium brachyrrhizum as a synonym of Epimedium leptorrhizum ; Epimedium dewuense as a synonym of Epimedium dolichostemon ; and Epimedium sagittatum var. oblongifoliolatum as a synonym of Epimedium borealiguizhouense .

  17. Five new synonyms in Epimedium (Berberidaceae from China

    Directory of Open Access Journals (Sweden)

    Yanjun Zhang

    2015-04-01

    Full Text Available Five new synonyms in Chinese Epimedium are designated in the present paper. Epimedium chlorandrum is treated as a synonym of E. acuminatum; Epimedium rhizomatosum as a synonym of E. membranaceum; Epimedium brachyrrhizum as a synonym of E. leptorrhizum; Epimedium dewuense as a synonym of E. dolichostemon; and Epimedium sagittatum var. oblongifoliolatum as a synonym of E. borealiguizhouense.

  18. Five new synonyms in Epimedium (Berberidaceae) from China.

    Science.gov (United States)

    Zhang, Yanjun; Dang, Haishan; Li, Shengyu; Li, Jianqiang; Wang, Ying

    2015-01-01

    Five new synonyms in Chinese Epimedium are designated in the present paper. Epimediumchlorandrum is treated as a synonym of Epimediumacuminatum; Epimediumrhizomatosum as a synonym of Epimediummembranaceum; Epimediumbrachyrrhizum as a synonym of Epimediumleptorrhizum; Epimediumdewuense as a synonym of Epimediumdolichostemon; and Epimediumsagittatumvar.oblongifoliolatum as a synonym of Epimediumborealiguizhouense.

  19. Siting of an MRS facility: identification of a geographic region that reduces transportation requirements

    International Nuclear Information System (INIS)

    Holter, G.M.; Braitman, J.L.

    1985-04-01

    The study reported here was undertaken as part of the site screening and evaluation activities for the Monitored Retrievable Storage (MRS) Program of the Office of Civilian Radioactive Waste Management (OCRWM), Department of Energy (DOE). Its primary purpose was to determine: the location and shape of a preferred geographic region within which locating an MRS facility would minimize total shipment miles for spent fuel transported through the MRS facility to a repository, and the sensitivity of the location and shape of this region and the reduction in total shipment miles to possible variations in waste management system logistics. As a result of this analysis, a geographic region has been identified which is preferred for siting an MRS facility. This region will be referred to as the preferred region in this study. Siting an MRS facility in the preferred region will limit total shipment miles (i.e., the total miles traveled for all shipments of spent fuel) to and from the MRS facility to within 20% of the lowest achievable. The region is preferred for a mixed truck/rail system of transport from reactors to the MRS facility. It is assumed that rail will be used to ship spent fuel from the MRS facility to a geologic repository for disposal. Siting an MRS facility in the preferred region will reduce total shipment miles for all currently considered system logistics options which include an MRS facility in the system. These options include: any first repository location, the possible range of spent fuel consolidation at the MRS, use of multi-cask or single-cask train shipments, use of current or future spent fuel transport casks, servicing only the first or both the first and second repositories, and shipment of fuel from western reactors either through the MRS facility or to a western facility (a second, smaller MRS facility or the first repository)

  20. Regional approaches to power plant siting in the United States of America

    International Nuclear Information System (INIS)

    DiNunno, J.J.

    1975-01-01

    The selection and evaluation of sites for power plants in the United States of America have become increasingly difficult in recent years as pressures from various societal segments have resulted in governmental restraints on selection and burning of fossil fuels, methods of heat dissipation, acquisition of transmission rights of way, and on environmental impact of industrialization in general. New legislation at both Federal and state levels has been enacted that influences power plant siting. In addition to environmental requirements that must be satisfied, implementing procedures require documented justification for sites chosen and public disclosure of the basis for selection. Some states have consolidated their regulatory activities in the power plant siting area to provide for a more unified approach to these problems. Although nuclear plants have by far the most rigorous requirements for documentation of site selection and plant design, the application of the same general philosophies to fossil plants has been made in several states and can be anticipated elsewhere. Individual site-related investigations have not so much changed in basics as they have been enlarged in scope. Whereas in the past the search for siting alternatives was frequently confined to a utility's service area, the additional siting constraints represented in environmental laws, the economies of size of nuclear power plants, and the sharing of plant capacities among utilities have contributed to a widening of the search area. Several states have assumed the responsibility for site search and investigation and their efforts extend state-wide. This paper discusses applications of regional approaches to power plant siting in the United States of America using case studies made by NUS Corporation, an engineering/environmental consulting firm. The universality of these approaches is indicated, leaving to national policies and goals the importance of values assigned to the basic siting factors

  1. Molecular characterization of monoclonal antibodies that inhibit acetylcholinesterase by targeting the peripheral site and backdoor region.

    Directory of Open Access Journals (Sweden)

    Yves Bourne

    Full Text Available The inhibition properties and target sites of monoclonal antibodies (mAbs Elec403, Elec408 and Elec410, generated against Electrophorus electricus acetylcholinesterase (AChE, have been defined previously using biochemical and mutagenesis approaches. Elec403 and Elec410, which bind competitively with each other and with the peptidic toxin inhibitor fasciculin, are directed toward distinctive albeit overlapping epitopes located at the AChE peripheral anionic site, which surrounds the entrance of the active site gorge. Elec408, which is not competitive with the other two mAbs nor fasciculin, targets a second epitope located in the backdoor region, distant from the gorge entrance. To characterize the molecular determinants dictating their binding site specificity, we cloned and sequenced the mAbs; generated antigen-binding fragments (Fab retaining the parental inhibition properties; and explored their structure-function relationships using complementary x-ray crystallography, homology modeling and flexible docking approaches. Hypermutation of one Elec403 complementarity-determining region suggests occurrence of antigen-driven selection towards recognition of the AChE peripheral site. Comparative analysis of the 1.9Å-resolution structure of Fab408 and of theoretical models of its Fab403 and Fab410 congeners evidences distinctive surface topographies and anisotropic repartitions of charges, consistent with their respective target sites and inhibition properties. Finally, a validated, data-driven docking model of the Fab403-AChE complex suggests a mode of binding at the PAS that fully correlates with the functional data. This comprehensive study documents the molecular peculiarities of Fab403 and Fab410, as the largest peptidic inhibitors directed towards the peripheral site, and those of Fab408, as the first inhibitor directed toward the backdoor region of an AChE and a unique template for the design of new, specific modulators of AChE catalysis.

  2. Cell-based land use screening procedure for regional siting analysis

    International Nuclear Information System (INIS)

    Jalbert, J.S.; Dobson, J.E.

    1976-01-01

    An energy facility site-screening methodology which permits the land resource planner to identify candidate siting areas was developed. Through the use of spatial analysis procedures and computer graphics, a selection of candidate areas is obtained. Specific sites then may be selected from among candidate areas for environmental impact analysis. The computerized methodology utilizes a cell-based geographic information system for specifying the suitability of candidate areas for an energy facility. The criteria to be considered may be specified by the user and weighted in terms of importance. Three primary computer programs have been developed. These programs produce thematic maps, proximity calculations, and suitability calculations. Programs are written so as to be transferrable to regional planning or regulatory agencies to assist in rational and comprehensive power plant site identification and analysis

  3. A method of identifying social structures in siting regions for deep geological repositories in Switzerland

    International Nuclear Information System (INIS)

    Brander, Simone

    2010-09-01

    Acceptance is a key element in the site selection process for deep geological repositories for high-level and low and intermediate-level radioactive waste in Switzerland. Participation requirements such as comprehensive negotiation issues and adequate resources have thus been defined by the Swiss Federal Office of Energy (SFOE). In 2008, on the basis of technical criteria Nagra (National Cooperative for the Disposal of Radioactive Waste) proposed several potential areas for deep geological repositories. The number of potential areas will be narrowed down within the next few years. All municipalities within the planning perimeter (the area in which surface facilities can be realised) are affected and form the siting region. In order to ensure that the local population have their say in the forthcoming discussions, regional participation bodies including all municipalities within a siting region are being set up by the SFOE. Regional participation ensures that local interests, needs and values are taken into account in the site selection process. Assembling the regional participation bodies is therefore of great importance. Before such bodies can be formed, however, the various interests, needs and values have to be identified, and special attention has to be paid to long-term interests of future generations, as well as to non-organised and under-represented interests. According to the concept of proportional representation, the interests, needs and values that are identified and weighted by the local population are to be represented in the regional participation procedure. The aim of this study is to share a method of mapping existing social structures in a defined geographical area. This involves a combination of an analysis of socio-economic statistical data and qualitative and quantitative social research methods

  4. Regional and site geological frameworks : proposed Deep Geologic Repository, Bruce County, Ontario

    Energy Technology Data Exchange (ETDEWEB)

    Raven, K.; Sterling, S.; Gaines, S.; Wigston, A. [Intera Engineering Ltd., Ottawa, ON (Canada); Frizzell, R. [Nuclear Waste Management Organization, Toronto, ON (Canada)

    2009-07-01

    The Nuclear Waste Management Organization is conducting geoscientific studies on behalf of Ontario Power Generation into the proposed development of a Deep Geologic Repository (DGR) for low and intermediate level radioactive waste (L and ILW) at the Bruce site, near Tiverton, Ontario. This paper presented a regional geological framework for the site that was based on a review of regional drilling; structural geology; paleozoic stratigraphy and sedimentology; a 3D geological framework model; a DGR geological site characterization model; bedrock stratigraphy and marker beds; natural fracture frequency data; and formation predictability. The studies have shown that the depth, thickness, orientation and rock quality of the 34 rock formations, members or units that comprise the 840 m thick Paleozoic bedrock sequence at the Bruce site are very uniform and predictable over distances of several kilometres. The proposed DGR will be constructed as an engineered facility comprising a series of underground emplacement rooms at a depth of 680 metres below ground within argillaceous limestones. The geoscientific studies are meant to provide a basis for the development of descriptive geological, hydrogeological and geomechanical models of the DGR site that will facilitate environmental and safety assessments. 11 refs., 3 tabs., 9 figs.

  5. Siting regions for deep geological repositories. Why just here?; Standortgebiete fuer geologische Tiefenlager. Warum gerade hier?

    Energy Technology Data Exchange (ETDEWEB)

    Rieser, A

    2009-09-15

    This report helps to the popularization of the Nagra works accomplished for the management and disposal of the radioactive wastes in Switzerland. The programme for management and disposal of the radioactive wastes are extensively determined by regulations. Protection of mankind and environment is the primary objective. The basic storage process is considered as having been solved. The question addressed in the report is where the facility has to be built; the site selection procedure includes five steps: 1) according to their type the wastes have to be allocated to two different repositories: for low- and intermediate-level wastes (L/ILW), and for high-level and alpha-toxic wastes (HLW); 2) the safety concept for both repositories and the requirements on the geology have to be determined; 3) large suitable geological-tectonic zones must be found where repositories could be built; 4) in these geological zones a suitable host rock has to be identified; 5) the most important spatial geological conditions of the host rock (minimum depth with respect to surface erosion, maximum depth in terms of engineering requirements, lateral extent) have to be identified. Based on these criteria, three suitable siting regions for a HLW repository were found in the North of Switzerland. The preferred host rock is Opalinus clay because of its very low permeability; it is therefore an excellent barrier against nuclide transport. In the three proposed siting regions, Opalinus clay is present in sufficient volumes at a suitable depth. For a L/ILW repository six different possible siting regions were identified, five in Northern Switzerland and one in Central Switzerland. In the three siting regions found for a possible HLW repository, it would also be possible to built a combined repository for both HLW and L/ILW wastes.

  6. Regional-interstate site-review procedure: low-level radioactive waste disposal facility

    International Nuclear Information System (INIS)

    1983-09-01

    The attributes of the Southern States Energy Board (SSEB) enable it to view federal/state interface problem areas from a perspective that can be uniquely constructive. The board is sensitive to the interests of both federal and state levels of government since it is composed of member states with common regional interests and confirmed by federal legislative action. It has been most effective when exercising a leadership role in finding procedures and practices that use the resources of both levels of government that are mutually supportive and nonduplicative. SSEB began an NRC-funded effort in that direction related to nuclear power plant siting in June 1975, entitled Regional-Interstate Nuclear Facility Siting Procedure Demonstration Project. SSEB approached the problem by working with interested states to analyze various elements of the licensing process, in particular with NEPA review procedures for interstate coordination where potential impacts extend beyond a single state and where the facility serves an interstate or regional need. SSEB also served as a catalyst in the development of a region-wide nuclear facility siting procedure that could improve the effectiveness and timeliness of the regulatory process

  7. Public Participation and Regional Development at a Nuclear Waste Disposal Site

    International Nuclear Information System (INIS)

    Ipsen, Detlev

    2003-01-01

    One of the conditions for citizens to actively participate in the search for a final repository for radioactive waste is public involvement and the preparation of perspectives for a long-term development of those regions which are geologically eligible for a nuclear waste disposal site. Regional development is an integral part of public participation and ranking second, after safety factors, as the essential field of interest for the local residents of a region chosen for a potential disposal site. Therefore, this presentation will start with the discussion of those considerations referring to theoretical and empirical principles of public participation in long-long-term and high-risk projects. In a second step, the principles of public participation will be outlined. Afterwards, I will focus on the significance of the region as living space for people before I put up for discussion a few thoughts on regional development. The question why the public should be involved actively and intensively in the search for a permanent disposal site, can be answered easily. So far all attempts, not only in Germany, but in most countries where the search for a disposal site is on, have failed due to resistance by the civilian population. Behind this pragmatic reasoning, however, there is a complex societal process which should be understood in order to be able to classify the individual elements of 'active and intensive participation'. In the last decades, a rather informal and situational form of democratic decision making and realization of interests has evolved alongside of the representative and formalized democracy. On one side, the institutionalized and formalized democratic structure is at work: the system of parliaments and government, of independent jurisdiction and mediatory organizations such as trade unions, associations and lobbyists who communicate their specific interests to the decision-making process

  8. Regional Variations of Public Perception on Contaminated Industrial Sites in China and Its Influencing Factors.

    Science.gov (United States)

    Li, Xiaonuo; Jiao, Wentao; Xiao, Rongbo; Chen, Weiping; Bai, Yanying

    2016-04-08

    Public involvement is critical in sustainable contaminated site management. It is important for China to improve public knowledge and participation, foster dialogue between urban managers and laypeople, and accelerate the remediation and redevelopment processes in contaminated site management. In this study, we collected 1812 questionnaires from nine cities around China through face-to-face interviews and statistically analyzed the perception of residents concerning contaminated sites. The results show that respondents' concern about soil pollution was lower than for other environmental issues and their knowledge of soil contamination was limited. The risks posed by contaminated industrial sites were well recognized by respondents, but they were unsatisfied with the performance of local agencies regarding information disclosure, publicity and education and public participation. Respondents believed that local governments and polluters should take the primary responsibility for contaminated site remediation. Most of them were unwilling to pay for contaminated site remediation and preferred recreational or public service redevelopment. Moreover, our research indicated that public perception varied among different cities. This variation was mainly determined by implementations of policy instruments and additionally affected by remediation technology, pollutant type, regional policy response and living distance.

  9. Hg in snow cover and snowmelt waters in high-sulfide tailing regions (Ursk tailing dump site, Kemerovo region, Russia).

    Science.gov (United States)

    Gustaytis, M A; Myagkaya, I N; Chumbaev, A S

    2018-07-01

    Gold-bearing polymetallic Cu-Zn deposits of sulphur-pyrite ores were discovered in the Novo-Ursk region in the 1930s. The average content of mercury (Hg) was approximately 120 μg/g at the time. A comprehensive study of Hg distribution in waste of metal ore enrichment industry was carried out in the cold season on the tailing dump site and in adjacent areas. Mercury concentration in among snow particulate, dissolved and colloid fractions was determined. The maximal Hg content in particulate fraction from the waste tailing site ranged 230-573 μg/g. Such indices as the frequency of aerosol dust deposition events per units of time and area, enrichment factor and the total load allowed to establish that the territory of the tailing waste dump site had a snow cover highly contaminated with dust deposited at a rate of 247-480 mg/(m 2 ∙day). Adjacent areas could be considered as area with low Hg contamination rate with average deposition rate of 30 mg/(m 2 ∙day). The elemental composition of the aerosol dust depositions was determined as well, which allowed to reveal the extent of enrichment waste dispersion throughout adjacent areas. The amount of Hg entering environment with snowmelt water discharge was estimated. As a result of snowmelting, in 2014 the nearest to the dump site hydrographic network got Hg as 7.1 g with colloids and as 5880 g as particles. The results obtained allowed to assess the degree of Hg contamination of areas under the impact of metal enrichment industry. Copyright © 2018 Elsevier Ltd. All rights reserved.

  10. CAPRRESI: Chimera Assembly by Plasmid Recovery and Restriction Enzyme Site Insertion.

    Science.gov (United States)

    Santillán, Orlando; Ramírez-Romero, Miguel A; Dávila, Guillermo

    2017-06-25

    Here, we present chimera assembly by plasmid recovery and restriction enzyme site insertion (CAPRRESI). CAPRRESI benefits from many strengths of the original plasmid recovery method and introduces restriction enzyme digestion to ease DNA ligation reactions (required for chimera assembly). For this protocol, users clone wildtype genes into the same plasmid (pUC18 or pUC19). After the in silico selection of amino acid sequence regions where chimeras should be assembled, users obtain all the synonym DNA sequences that encode them. Ad hoc Perl scripts enable users to determine all synonym DNA sequences. After this step, another Perl script searches for restriction enzyme sites on all synonym DNA sequences. This in silico analysis is also performed using the ampicillin resistance gene (ampR) found on pUC18/19 plasmids. Users design oligonucleotides inside synonym regions to disrupt wildtype and ampR genes by PCR. After obtaining and purifying complementary DNA fragments, restriction enzyme digestion is accomplished. Chimera assembly is achieved by ligating appropriate complementary DNA fragments. pUC18/19 vectors are selected for CAPRRESI because they offer technical advantages, such as small size (2,686 base pairs), high copy number, advantageous sequencing reaction features, and commercial availability. The usage of restriction enzymes for chimera assembly eliminates the need for DNA polymerases yielding blunt-ended products. CAPRRESI is a fast and low-cost method for fusing protein-coding genes.

  11. Analysis of the CCR5 gene coding region diversity in five South American populations reveals two new non-synonymous alleles in Amerindians and high CCR5*D32 frequency in Euro-Brazilians

    Directory of Open Access Journals (Sweden)

    Angelica B.W. Boldt

    2009-01-01

    Full Text Available The CC chemokine receptor 5 (CCR5 molecule is an important co-receptor for HIV. The effect of the CCR5*D32 allele in susceptibility to HIV infection and AIDS disease is well known. Other alleles than CCR5*D32 have not been analysed before, neither in Amerindians nor in the majority of the populations all over the world. We investigated the distribution of the CCR5 coding region alleles in South Brazil and noticed a high CCR5*D32 frequency in the Euro-Brazilian population of the Paraná State (9.3%, which is the highest thus far reported for Latin America. The D32 frequency is even higher among the Euro-Brazilian Mennonites (14.2%. This allele is uncommon in Afro-Brazilians (2.0%, rare in the Guarani Amerindians (0.4% and absent in the Kaingang Amerindians and the Oriental-Brazilians. R223Q is common in the Oriental-Brazilians (7.7% and R60S in the Afro-Brazilians (5.0%. A29S and L55Q present an impaired response to b-chemokines and occurred in Afro- and Euro-Brazilians with cumulative frequencies of 4.4% and 2.7%, respectively. Two new non-synonymous alleles were found in Amerindians: C323F (g.3729G > T in Guarani (1.4% and Y68C (g.2964A > G in Kaingang (10.3%. The functional characteristics of these alleles should be defined and considered in epidemiological investigations about HIV-1 infection and AIDS incidence in Amerindian populations.

  12. No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation

    Directory of Open Access Journals (Sweden)

    Hellberg Michael E

    2006-03-01

    Full Text Available Abstract Background The mitochondrial DNA (mtDNA of most animals evolves more rapidly than nuclear DNA, and often shows higher levels of intraspecific polymorphism and population subdivision. The mtDNA of anthozoans (corals, sea fans, and their kin, by contrast, appears to evolve slowly. Slow mtDNA evolution has been reported for several anthozoans, however this slow pace has been difficult to put in phylogenetic context without parallel surveys of nuclear variation or calibrated rates of synonymous substitution that could permit quantitative rate comparisons across taxa. Here, I survey variation in the coding region of a mitochondrial gene from a coral species (Balanophyllia elegans known to possess high levels of nuclear gene variation, and estimate synonymous rates of mtDNA substitution by comparison to another coral (Tubastrea coccinea. Results The mtDNA surveyed (630 bp of cytochrome oxidase subunit I was invariant among individuals sampled from 18 populations spanning 3000 km of the range of B. elegans, despite high levels of variation and population subdivision for allozymes over these same populations. The synonymous substitution rate between B. elegans and T. coccinea (0.05%/site/106 years is similar to that in most plants, but 50–100 times lower than rates typical for most animals. In addition, while substitutions to mtDNA in most animals exhibit a strong bias toward transitions, mtDNA from these corals does not. Conclusion Slow rates of mitochondrial nucleotide substitution result in low levels of intraspecific mtDNA variation in corals, even when nuclear loci vary. Slow mtDNA evolution appears to be the basal condition among eukaryotes. mtDNA substitution rates switch from slow to fast abruptly and unidirectionally. This switch may stem from the loss of just one or a few mitochondrion-specific DNA repair or replication genes.

  13. CanWEA regional issues and wind energy project siting : mountainous areas

    Energy Technology Data Exchange (ETDEWEB)

    D' Entremont, M. [Jacques Whitford Ltd., Vancouver, BC (Canada)]|[Axys Environmental Consulting Ltd., Vancouver, BC (Canada)

    2008-07-01

    Planning and permitting considerations for wind energy project siting in mountainous areas were discussed. Mountainous regions have a specific set of environmental and socio-economic concerns. Potential disruptions to wildlife, noise, and visual impacts are a primary concern in the assessment of potential wind farm projects. Alpine habitats are unique and often contain fragile and endangered species. Reclamation techniques for mountainous habitats have not been extensively tested, and the sites are not as resilient as sites located in other ecosystems. In addition, alpine habitats are often migratory corridors and breeding grounds for threatened or endangered birds. In the winter months, alpine habitats are used by caribou, grizzly bears, and wolverine dens. Bats are also present at high elevations. It is often difficult to conduct baseline and monitoring studies in mountainous areas since alpine habitat is subject to rapid weather changes, and has a very short construction period. tabs., figs.

  14. Regional patterns of declining butternut (Juglans cinerea L.) suggest site characteristics for restoration

    OpenAIRE

    Morin, Randall S.; Gottschalk, Kurt W.; Ostry, Michael E.; Liebhold, Andrew M.

    2017-01-01

    Abstract Butternut trees dying from a canker disease were first reported in southwestern Wisconsin in 1967. Since then, the disease has caused extensive mortality of butternut throughout its North American range. The objectives of this study were to quantify changes in butternut populations and density across its range and identify habitat characteristics of sites where butternut is surviving in order to locate regions for potential butternut restoration. The natural range of butternut (Jugla...

  15. A some aspects of medical demographical situation in the regions, confidant to Semipalatinsk former test site

    International Nuclear Information System (INIS)

    Slazhneva, T.I.; Korchevskij, A.A.; Tret'yakova, S.N.; Pozdnyakova, A.P.

    1993-01-01

    It had been analysed the data of mortality index and average future life span (AFLS).The data was devided in sex and age groups of Pavlodar region (Kazakstan) for the period of 1970, 1979, 1989 and given in comparison with Semipalatinsk region (Kazakstan) and Former Soviet Union. It was discovered peculiarities of demographic index dynamics for last decades: downfall of average life span of population from 1970 to 1979 with further increasing in 1989. In Semipalatinsk region the AFLS of men was decreasing to 2,19 year, women - to 1,24 year; in Pavlodar region the AFLS of men was decreasing to 3,87 year, women - to 4,3 year. Relative compensation of this effect was being marked to 1989 year: from 1979 to 1989 the AFLS index of Pavlodar region men increased to 2,93 year, women - to 1,83 year. Similar oscillations were being followed up for all age groups. Special attention is drawing to the infants mortality dynamic in the regions, confidant to Semipalatinsk test site. Radical ascent of the infants mortality in 1970-1983 period leaded to shaping of excluding unfavourable indexes (71,9 % for 1000 burned in 1975). Analysis confirmed the information of demographic indexes, as integral characteristics of population health levels and ecological equilibrium rate in the regions

  16. The Ironbridge Gorge Heritage Site and its local and regional functions

    Directory of Open Access Journals (Sweden)

    Cudny Waldemar

    2017-06-01

    Full Text Available The article is devoted to the issue of heritage and its functions. Based on the existing literature, the author presents the definition of heritage, the classification of heritage resources, and its most important impacts. The aim of the article was to show the functions that may be performed by a heritage site, locally and regionally. The example used by the author is the Ironbridge Gorge Heritage Site in the United Kingdom. Most heritage functions described by other authors are confirmed in this case study. The cultural heritage of the Ironbridge Gorge creates an opportunity to undertake various local and regional activities, having first of all an educational influence on the inhabitants, school youth and tourists. We must not ignore the economicinfluences, such as financing the activity of the Ironbridge Trust (the institution administering the site, generating income for local firms providing service to tourists, or for construction companies. This income helps to preserve and conserve the tangible heritage of the Ironbridge Gorge, as well as to generate jobs in heritage management, conservation and heritage tourism. Other effects of the Ironbridge Gorge Site include a socio-cultural impact or that related to sustainable development.

  17. Site-specific estimates of water yield applied in regional acid sensitivity surveys across western Canada

    Directory of Open Access Journals (Sweden)

    Patrick D. SHAW

    2010-08-01

    Full Text Available Runoff or water yield is an important input to the Steady-State Water Chemistry (SSWC model for estimating critical loads of acidity. Herein, we present site-specific water yield estimates for a large number of lakes (779 across three provinces of western Canada (Manitoba, Saskatchewan, and British Columbia using an isotope mass balance (IMB approach. We explore the impact of applying site-specific hydrology as compared to use of regional runoff estimates derived from gridded datasets in assessing critical loads of acidity to these lakes. In general, the average water yield derived from IMB is similar to the long-term average runoff; however, IMB results suggest a much larger range in hydrological settings of the lakes, attributed to spatial heterogeneity in watershed characteristics and landcover. The comparison of critical loads estimates from the two methods suggests that use of average regional runoff data in the SSWC model may overestimate critical loads for the majority of lakes due to systematic skewness in the actual runoff distributions. Implications for use of site-specific hydrology in regional critical loads assessments across western Canada are discussed.

  18. Overlapping hotspots in CDRs are critical sites for V region diversification.

    Science.gov (United States)

    Wei, Lirong; Chahwan, Richard; Wang, Shanzhi; Wang, Xiaohua; Pham, Phuong T; Goodman, Myron F; Bergman, Aviv; Scharff, Matthew D; MacCarthy, Thomas

    2015-02-17

    Activation-induced deaminase (AID) mediates the somatic hypermutation (SHM) of Ig variable (V) regions that is required for the affinity maturation of the antibody response. An intensive analysis of a published database of somatic hypermutations that arose in the IGHV3-23*01 human V region expressed in vivo by human memory B cells revealed that the focus of mutations in complementary determining region (CDR)1 and CDR2 coincided with a combination of overlapping AGCT hotspots, the absence of AID cold spots, and an abundance of polymerase eta hotspots. If the overlapping hotspots in the CDR1 or CDR2 did not undergo mutation, the frequency of mutations throughout the V region was reduced. To model this result, we examined the mutation of the human IGHV3-23*01 biochemically and in the endogenous heavy chain locus of Ramos B cells. Deep sequencing revealed that IGHV3-23*01 in Ramos cells accumulates AID-induced mutations primarily in the AGCT in CDR2, which was also the most frequent site of mutation in vivo. Replacing the overlapping hotspots in CDR1 and CDR2 with neutral or cold motifs resulted in a reduction in mutations within the modified motifs and, to some degree, throughout the V region. In addition, some of the overlapping hotspots in the CDRs were at sites in which replacement mutations could change the structure of the CDR loops. Our analysis suggests that the local sequence environment of the V region, and especially of the CDR1 and CDR2, is highly evolved to recruit mutations to key residues in the CDRs of the IgV region.

  19. Reconnaissance survey of site 7 of the proposed Three Rivers Regional Landfill and Technology Center, Savannah River Site, Aiken County, South Carolina

    Energy Technology Data Exchange (ETDEWEB)

    Cabak, M.A.; Beck, M.L.; Gillam, C.; Sassaman, K.E.

    1996-02-01

    This report documents the archaeological investigation of Site 7 of the proposed Three Rivers Regional Landfill and Technology Center in Aiken County on the United States Department of Energy`s Savannah River Site (SRS) in Aiken and Barnwell Counties, South Carolina. Pedestrian and subsurface survey techniques were used to investigate the 1,403-acre project area. Survey resulted in the discovery of 23 previously unrecorded sites and 11 occurrences; six previously recorded sites were also investigated. These sites consist of six prehistoric sites, nine historic sites, and 14 sites with both prehistoric and historic components. Sites locations and project area boundaries are provided on a facsimile of a USGS 7.5 topographic map. The prehistoric components consist of very small, low-density lithic and ceramic scatters; most contain less than 10 artifacts. Six of the prehistoric components are of unknown cultural affiliation, the remaining prehistoric sites were occupied predominately in the Woodland period. The historic sites are dominated by postbellum/modem home places of tenant and yeoman farmers but four historic sites were locations of antebellum house sites (38AK136, 38AK613, 38AK660, and 38AK674). The historic sites also include an African-American school (38AK677).

  20. Chemical dechlorination of pesticides at a superfund site in Region II

    International Nuclear Information System (INIS)

    Pendergrass, S.; Prince, J.

    1991-01-01

    Selecting technologies for cleaning up hazardous waste sites is a complex task, due in part to the rapidly changing nature of the state-of-the-art in technology. There is strong support for use of innovative technologies as specified in Section 121(b) of CERCLA. However, use of an innovative technology requires overcoming a variety of challenges. These challenges include: Screening potentially appropriate technologies, including innovative technologies, and selecting one or more potential innovative technologies for which preliminary results are promising; however, site-specific data are needed prior to technology evaluation. Evaluating the effectiveness of the proposed technology for the site through the use of treatability studies. Gaining acceptance for the innovative technology, which may employ new or unfamiliar concepts. Determining optimal design and operating parameters for full-scale remediation. This paper discusses the technology evaluation process and how that process supported the selection of an innovative technology for the Myers Property site, a Superfund site in Region II. A case study is presented showing how technology screening and laboratory treatability studies were used to evaluate an innovative technology (chemical dechlorination), which was selected as the technology for remediation of soils and sediments contaminated with pesticides at this environmentally sensitive site in New Jersey. The remedy selected by the U.S. EPA for this site designates chemical dechlorination as the selected technology, but does not specify any particular vendor or process. Rather, the remedy sets forth technology performance standards and recommends certain design tasks which may be used to select a particular chemical process. This paper discusses he of these design tasks as they might apply to innovative technologies, using chemical dechlorination as a model

  1. Photochemical processing of organic aerosol at nearby continental sites: contrast between urban plumes and regional aerosol

    Science.gov (United States)

    Slowik, J. G.; Brook, J.; Chang, R. Y.-W.; Evans, G. J.; Hayden, K.; Jeong, C.-H.; Li, S.-M.; Liggio, J.; Liu, P. S. K.; McGuire, M.; Mihele, C.; Sjostedt, S.; Vlasenko, A.; Abbatt, J. P. D.

    2011-03-01

    As part of the BAQS-Met 2007 field campaign, Aerodyne time-of-flight aerosol mass spectrometers (ToF-AMS) were deployed at two sites in southwestern Ontario from 17 June to 11 July 2007. One instrument was located at Harrow, ON, a rural, agriculture-dominated area approximately 40 km southeast of the Detroit/Windsor/Windsor urban area and 5 km north of Lake Erie. The second instrument was located at Bear Creek, ON, a rural site approximately 70 km northeast of the Harrow site and 50 km east of Detroit/Windsor. Positive matrix factorization analysis of the combined organic mass spectral dataset yields factors related to secondary organic aerosol (SOA), direct emissions, and a factor tentatively attributed to the reactive uptake of isoprene and/or condensation of its early generation reaction products. This is the first application of PMF to simultaneous AMS measurements at different sites, an approach which allows for self-consistent, direct comparison of the datasets. Case studies are utilized to investigate processing of SOA from (1) fresh emissions from Detroit/Windsor and (2) regional aerosol during periods of inter-site flow. A strong correlation is observed between SOA/excess CO and photochemical age as represented by the NOx/NOy ratio for Detroit/Windsor outflow. Although this correlation is not evident for more aged air, measurements at the two sites during inter-site transport nevertheless show evidence of continued atmospheric processing by SOA production. However, the rate of SOA production decreases with airmass age from an initial value of ~10.1 μg m-3 ppmvCO-1 h-1 for the first ~10 h of plume processing to near-zero in an aged airmass (i.e. after several days). The initial SOA production rate is comparable to the observed rate in Mexico City over similar timescales.

  2. Relationship between regional planning and site finding of power stations with regard to energy supply

    International Nuclear Information System (INIS)

    Hoppe, I.

    1980-01-01

    Based on the discussion on energy policy generally brought in the fore, spatial relationships are discussed especially in the field of electricity supply. A review is given of the legal systematism in which electricity supply and regional planning are to be found. How state planners organize the provision with sites for high-capacity thermal power stations is described as the concrete development of systematic legal relationships, concepts of, and opportunities for, state and regional planning. In the main part, this paper focusses on the analysis of the course of development power station construction and the distribution system have taken with regard to the question as to whether and to what extent this technological character is also responsible for an emerging structure in which these plants are mainly centred in a special region. (orig.) [de

  3. Evaluation of the 'amount effect' at speleothem sites in the Asian monsoon region

    International Nuclear Information System (INIS)

    Lee, Jung-Eun; Swann, Abigail L

    2010-01-01

    Oxygen isotope measurements from speleothems have been used to infer past hydrological cycles because the isotopic composition of precipitation is observed to decrease with increasing precipitation rates over low latitude coastal and island stations (the 'amount effect'). Here we show that local precipitation amount can be inferred from the differences in oxygen isotopic composition if the measurement site is in a subtropical coastal region where water vapor is transported directly from the ocean. The amount effect works because vapor from local evaporation and vapor imported from other regions have distinctly different isotopic compositions - the δ 18 O of vapor flux from evaporation is ∼10 per mille higher than the δ 18 O of imported vapor over subtropical oceanic regions - and precipitation is usually higher over the area with larger convergence. Thus, δ 18 O in precipitation can differentiate between the contribution of local evaporation and moisture convergence if the isotopic composition of local evaporation and or transported vapor remains relatively constant. Our work indicates that sites further inland may not be suitable for studying the changes in local precipitation amount but still reflect the combined changes of precipitation amount and changes in vapor transport pattern. We have shown that Hulu Cave is a reasonable site to interpret precipitation from δ 18 O p : estimated precipitation difference between present-day and Last Glacial Maximum (LGM) from measured δ 18 O p difference (1∼2 per mille ) would be 0.8-2.2 mm/day (lower during the LGM) assuming our model simulates evapotranspiration reasonably well at this site.

  4. 77 FR 62535 - Hydro Aluminum North America, Inc., Midwest Region, Including On-Site Leased Workers From...

    Science.gov (United States)

    2012-10-15

    ... Aluminum North America, Inc., Midwest Region, Including On- Site Leased Workers From Employment Group, Aerotek, and Manpower, Kalamazoo, Michigan; Hydro Aluminum North America, Inc., Midwest Region, Including... Aluminum North America, Inc., Kalamazoo, Michigan. The subject worker group includes on-site leased workers...

  5. A preferred region for recombinational patch repair in the 5' untranslated region of primer binding site-impaired murine leukemia virus vectors

    DEFF Research Database (Denmark)

    Mikkelsen, J G; Lund, Anders Henrik; Kristensen, K D

    1996-01-01

    , suggesting the involvement of a specific endogenous virus-like sequence in patch repair rescue of the primer binding site mutants. The putative recombination partner RNA was found in virions from psi-2 cells as detected by analysis of glutamine tRNA-initiated cDNA and by sequence analysis of regions...... site to allow correct second-strand transfer in reverse transcription. The system thereby selects for a reverse transcriptase-mediated recombination event in the 5' untranslated region. A panel of sequence differences between the recombination partners in this region has allowed mapping of the site...

  6. Decision Making on Regional Landfill Site Selection in Hormozgan Province Using Smce

    Science.gov (United States)

    Majedi, A. S.; Kamali, B. M.; Maghsoudi, R.

    2015-12-01

    Landfill site selection and suitable conditions to bury hazardous wastes are among the most critical issues in modern societies. Taking several factors and limitations into account along with true decision making requires application of different decision techniques. To this end, current paper aims to make decisions about regional landfill site selection in Hormozgan province and utilizes SMCE technique combined with qualitative and quantitative criteria to select the final alternatives. To this respect, we first will describe the existing environmental situation in our study area and set the goals of our study in the framework of SMCE and will analyze the effective factors in regional landfill site selection. Then, methodological procedure of research was conducted using Delphi approach and questionnaires (in order to determine research validity, Chronbach Alpha (0.94) method was used). Spatial multi-criteria analysis model was designed in the form of criteria tree in SMCE using IL WIS software. Prioritization of respective spatial alternatives included: Bandar Abbas city with total 4 spatial alternatives (one zone with 1st priority, one zone with 3rd priority and two zones with 4thpriority) was considered the first priority, Bastak city with total 3 spatial alternatives (one zone with 2nd priority, one zone with 3rdpriorit and one zone with 4th priority) was the second priority and Bandar Abbas, Minab, Jask and Haji Abad cities were considered as the third priority.

  7. Conceptual model for regional radionuclide transport from a basalt repository site. Final draft, technical memorandum

    Energy Technology Data Exchange (ETDEWEB)

    Walton, W.C.; Voorhees, M.L.; Prickett, T.A.

    1980-05-23

    This technical memorandum was prepared to: (1) describe a typical basalt radionuclide repository site, (2) describe geologic and hydrologic processes associated with regional radionuclide transport in basalts, (3) define the parameters required to model regional radionuclide transport from a basalt repository site, and (4) develop a ''conceptual model'' of radionuclide transport from a basalt repository site. In a general hydrological sense, basalts may be described as layered sequences of aquifers and aquitards. The Columbia River Basalt, centered near the semi-arid Pasco Basin, is considered by many to be typical basalt repository host rock. Detailed description of the flow system including flow velocities with high-low hydraulic conductivity sequences are not possible with existing data. However, according to theory, waste-transport routes are ultimately towards the Columbia River and the lengths of flow paths from the repository to the biosphere may be relatively short. There are many physical, chemical, thermal, and nuclear processes with associated parameters that together determine the possible pattern of radionuclide migration in basalts and surrounding formations. Brief process descriptions and associated parameter lists are provided. Emphasis has been placed on the use of the distribution coefficient in simulating ion exchange. The use of the distribution coefficient approach is limited because it takes into account only relatively fast mass transfer processes. In general, knowledge of hydrogeochemical processes is primitive.

  8. Conceptual model for regional radionuclide transport from a basalt repository site. Final draft, technical memorandum

    International Nuclear Information System (INIS)

    Walton, W.C.; Voorhees, M.L.; Prickett, T.A.

    1980-01-01

    This technical memorandum was prepared to: (1) describe a typical basalt radionuclide repository site, (2) describe geologic and hydrologic processes associated with regional radionuclide transport in basalts, (3) define the parameters required to model regional radionuclide transport from a basalt repository site, and (4) develop a ''conceptual model'' of radionuclide transport from a basalt repository site. In a general hydrological sense, basalts may be described as layered sequences of aquifers and aquitards. The Columbia River Basalt, centered near the semi-arid Pasco Basin, is considered by many to be typical basalt repository host rock. Detailed description of the flow system including flow velocities with high-low hydraulic conductivity sequences are not possible with existing data. However, according to theory, waste-transport routes are ultimately towards the Columbia River and the lengths of flow paths from the repository to the biosphere may be relatively short. There are many physical, chemical, thermal, and nuclear processes with associated parameters that together determine the possible pattern of radionuclide migration in basalts and surrounding formations. Brief process descriptions and associated parameter lists are provided. Emphasis has been placed on the use of the distribution coefficient in simulating ion exchange. The use of the distribution coefficient approach is limited because it takes into account only relatively fast mass transfer processes. In general, knowledge of hydrogeochemical processes is primitive

  9. Radioactive waste disposal programme and siting regions for geological deep repositories. Executive summary. November 2008

    International Nuclear Information System (INIS)

    2008-11-01

    There are radioactive wastes in Switzerland. Since many decades they are produced by the operation of the five nuclear power plants, by medicine, industry and research. Important steps towards the disposal of these wastes are already realized; the corresponding activities are practised. This particularly concerns handling and packaging of the radioactive wastes, their characterization and inventory, as well as the interim storage and the inferred transportations. Preparatory works in the field of scientific research on deep geological repositories have allowed to acquire high level of technical and scientific expertise in that domain. The feasibility of building long-term safe geological repositories in Switzerland was demonstrated for all types of radioactive wastes; the demonstration was accepted by the Federal Council. There is enough knowledge to propose geological siting regions for further works. The financial funds already accumulated guaranty the financing of the dismantling of the power plants as well as building deep geological repositories for the radioactive wastes. The regulations already exist and the organisational arrangements necessary for the fruitful continuation of the works already done have been taken. The programme of the disposal of radioactive wastes also describes the next stages towards the timely realization of the deep repositories as well as the level of the financial needs. The programme is updated every five years, checked by the regulatory bodies and accepted by the Federal Council who reports to the parliament. The process of choosing a site, which will be completed in the next years, is detailed in the conceptual part of the programme for deep geological repositories. The NAGRA proposals are based exclusively on technical and scientific considerations; the global evaluation taking into account also political considerations has to be performed by the authorities and the Federal Council. The programme states that at the beginning of

  10. Heritage sites in the Eastern region of Cuba, new approaches for preservation

    Directory of Open Access Journals (Sweden)

    Luis Enrique Bello-Caballero

    2017-01-01

    Full Text Available The Eastern Region of Cuba holds five properties inscribed in the UNESCO World Heritage List, which evidence the cultural heritage richness. Therefore, several studies in the national context contribute to analyze the different process related to heritage sites management. However, the studies that embrace current deficiencies on heritage analysis and monitoring are yet insufficient. New studies should contribute to the control and the adoption of conservation actions, by means of the study, visualization and updating of information related to negative factors that influences the loss of cultural values, considering the preventive conservation approach. This paper aims at presenting the joint ongoing research between the Universidad de Oriente and the KU Leuven, within the frame of the VLIR IUC Project, which final goal is to design a method for the spatial analysis and monitoring of heritage sites through a GIS based tool implementation, with a preventive conservation approach.

  11. Are Synonymous Substitutions in Flowering Plant Mitochondria Neutral?

    Science.gov (United States)

    Wynn, Emily L; Christensen, Alan C

    2015-10-01

    Angiosperm mitochondrial genes appear to have very low mutation rates, while non-gene regions expand, diverge, and rearrange quickly. One possible explanation for this disparity is that synonymous substitutions in plant mitochondrial genes are not truly neutral and selection keeps their occurrence low. If this were true, the explanation for the disparity in mutation rates in genes and non-genes needs to consider selection as well as mechanisms of DNA repair. Rps14 is co-transcribed with cob and rpl5 in most plant mitochondrial genomes, but in some genomes, rps14 has been duplicated to the nucleus leaving a pseudogene in the mitochondria. This provides an opportunity to compare neutral substitution rates in pseudogenes with synonymous substitution rates in the orthologs. Genes and pseudogenes of rps14 have been aligned among different species and the mutation rates have been calculated. Neutral substitution rates in pseudogenes and synonymous substitution rates in genes are significantly different, providing evidence that synonymous substitutions in plant mitochondrial genes are not completely neutral. The non-neutrality is not sufficient to completely explain the exceptionally low mutation rates in land plant mitochondrial genomes, but selective forces appear to play a small role.

  12. Regional economic impact assessment: Evaluating remedial alternatives for the Portland Harbor Superfund Site, Portland, Oregon, USA.

    Science.gov (United States)

    Harrison, David; Coughlin, Conor; Hogan, Dylan; Edwards, Deborah A; Smith, Benjamin C

    2018-01-01

    The present paper describes a methodology for evaluating impacts of Superfund remedial alternatives on the regional economy in the context of a broader sustainability evaluation. Although economic impact methodology is well established, some applications to Superfund remedial evaluation have created confusion because of seemingly contradictory results. This confusion arises from failure to be explicit about 2 opposing impacts of remediation expenditures: 1) positive regional impacts of spending additional money in the region and 2) negative regional impacts of the need to pay for the expenditures (and thus forgo other expenditures in the region). The present paper provides a template for economic impact assessment that takes both positive and negative impacts into account, thus providing comprehensive estimates of net impacts. The paper also provides a strategy for identifying and estimating major uncertainties in the net impacts. The recommended methodology was applied at the Portland Harbor Superfund Site, located along the Lower Willamette River in Portland, Oregon, USA. The US Environmental Protection Agency (USEPA) developed remedial alternatives that it estimated would cost up to several billion dollars, with construction durations possibly lasting decades. The economic study estimated regional economic impacts-measured in terms of gross regional product (GRP), personal income, population, and employment-for 5 of the USEPA alternatives relative to the "no further action" alternative. Integr Environ Assess Manag 2018;14:32-42. © 2017 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of Society of Environmental Toxicology & Chemistry (SETAC). © 2017 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of Society of Environmental Toxicology & Chemistry (SETAC).

  13. Application of computational algorithms to assess the functionality of non-synonymous substitutions in MHC DRB gene of Nigerian goats

    Directory of Open Access Journals (Sweden)

    Yakubu Abdulmojeed

    2017-01-01

    Full Text Available The Major Histocompatibility Complex (MHC contains highly variable multi-gene families, which play a key role in the adaptive immune response within vertebrates. Among the Capra MHC class II genes, the expressed DRB locus is highly polymorphic, particularly in exon 2, which encodes the antigen-binding site. Models of variable non-synonymous/synonymous rate ratios among sites may provide important insights into functional constraints at different amino acid sites and may be used to detect sites under positive selection. Many non-synonymous single nucleotide polymorphisms (nsSNPs at the DRB locus in goats are suspected to impact protein function. This study, therefore, aimed at comparing the efficiency of six computational approaches to predict the likelihood of a particular non-synonymous (amino acid change coding SNP to cause a functional impact on the protein. This involved the use of PANTHER, SNAP, SIFT, PolyPhen-2, PROVEAN and nsSNPAnalyzer bioinformatics analytical tools in detecting harmful and beneficial effects at H57G, Y89R, V104D and Y112I substitutions in the peptide binding region of the DRB gene of Nigerian goats. The results from PANTHER analysis revealed that H57G, Y89R and Y112I substitutions (Pdeleterious= 0.113, 0.204 and 0.472, respectively were beneficial; while that of V104D was deleterious (Pdeleterious= 0.756, an indication that it was non-neutral. As regards the SNAP approach, H57G and Y89R substitutions were returned neutral with expected accuracy of 53 and 69%, respectively while V104D and Y112I substitutions were harmful. H57G and Y89R substitutions were also found harmless in the SIFT analysis. However, only H57G (PROVEAN and V104D (nsSNPAnalyzer amino acid substitutions were found to be beneficial. Interestingly, the predicted 3D structures of both native and mutant DRB protein appeared similar as validated by Ramachandran plots. The consensus reached by PANTHER, SNAP, SIFT and PolyPhen-2 approaches on the neutrality

  14. A Cost-based Explanation of Gradual, Regional Internationalization of Multinationals on Social Networking Sites

    DEFF Research Database (Denmark)

    Pogrebnyakov, Nicolai

    2017-01-01

    This paper examines firm internationalization on social networking sites (SNS). It systematically examines costs faced by an internationalizing firm and how firms react to these costs according to “distance-dependent” (gradual and regional) and “distance-invariant” (born-global) explanations...... of internationalization. Data on 5827 country pages of 240 multinational firms on Facebook, the most popular SNS today, is used. Creating a foreign country-specific Facebook page is considered the SNS equivalent of opening a physical subsidiary in that country. The data show that multinationals exhibit...

  15. Wind Resource Variations Over Selected Sites in the West African Sub-Region

    International Nuclear Information System (INIS)

    Iheonu, E. E.; Akingbade, F.O A.; Ocholi, M.

    2002-01-01

    The analysis of wind characteristics and wind resource potentials at 4 locations in the West African sub-region is presented, applying data obtained at the Ibadan central station of the International Institute of Tropical Agriculture (IITA-Ibadan, Nigeria). The study has shown that the annual variations of wind speed have coefficient of variability between 10 and 15% but the available wind power at the studied locations is generally poor with values ranging between 2 and 10 Wm2 at the standard meteorological height of 10 m. Cotonou (Lat. 6.4 0 N, Long. 2.3 0 E) Benin Republic has however been distinguished from the other three locations in Nigeria, as the most promising site for wind resource development and utilization in the sub-region. With appropriate choice of wind turbine characteristics and design efficiency, establishing wind farms at the Cotonou location for electrical energy production could be feasible

  16. Array analysis of regional Pn and Pg wavefields from the Nevada Test Site

    International Nuclear Information System (INIS)

    Leonard, M.A.

    1991-06-01

    Small-aperture high-frequency seismic arrays with dimensions of a few kilometers or less, can improve our ability to seismically monitor compliance with a low-yield Threshold Test Ban Treaty. This work studies the characteristics and effectiveness of array processing of the regional Pn and Pg wavefields generated by underground nuclear explosions at the Nevada Test Site. Waveform data from the explosion HARDIN (m b = 5.5) is recorded at a temporary 12-element, 3-component, 1.5 km-aperture array sited in an area of northern Nevada. The explosions VILLE (m b = 4.4) and SALUT (m b = 5.5) are recorded at two arrays sited in the Mojave desert, one a 96-element vertical-component 7 km-aperture array and the other a 155-element vertical-component 4 km-aperture array. Among the mean spectra for the m b = 5.5 events there are significant differences in low-frequency spectral amplitudes between array sites. The spectra become nearly identical beyond about 6 Hz. Spectral ratios are used to examine seismic source properties and the partitioning of energy between Pn and Pg. Frequency-wavenumber analysis at the 12-element array is used to obtain estimates of signal gain, phase velocity, and source azimuth. This analysis reveals frequency-dependent biases in velocity and azimuth of the coherent Pn and Pg arrivals. Signal correlation, the principal factor governing array performance, is examined in terms of spatial coherence estimates. The coherence is found to vary between the three sites. In all cases the coherence of Pn is greater than that for Pg. 81 refs., 92 figs., 5 tabs

  17. Array analysis of regional Pn and Pg wavefields from the Nevada Test Site

    Energy Technology Data Exchange (ETDEWEB)

    Leonard, M.A. (California Univ., Berkeley, CA (United States). Dept. of Geology and Geophysics Lawrence Berkeley Lab., CA (United States))

    1991-06-01

    Small-aperture high-frequency seismic arrays with dimensions of a few kilometers or less, can improve our ability to seismically monitor compliance with a low-yield Threshold Test Ban Treaty. This work studies the characteristics and effectiveness of array processing of the regional Pn and Pg wavefields generated by underground nuclear explosions at the Nevada Test Site. Waveform data from the explosion HARDIN (m{sub b} = 5.5) is recorded at a temporary 12-element, 3-component, 1.5 km-aperture array sited in an area of northern Nevada. The explosions VILLE (m{sub b} = 4.4) and SALUT (m{sub b} = 5.5) are recorded at two arrays sited in the Mojave desert, one a 96-element vertical-component 7 km-aperture array and the other a 155-element vertical-component 4 km-aperture array. Among the mean spectra for the m{sub b} = 5.5 events there are significant differences in low-frequency spectral amplitudes between array sites. The spectra become nearly identical beyond about 6 Hz. Spectral ratios are used to examine seismic source properties and the partitioning of energy between Pn and Pg. Frequency-wavenumber analysis at the 12-element array is used to obtain estimates of signal gain, phase velocity, and source azimuth. This analysis reveals frequency-dependent biases in velocity and azimuth of the coherent Pn and Pg arrivals. Signal correlation, the principal factor governing array performance, is examined in terms of spatial coherence estimates. The coherence is found to vary between the three sites. In all cases the coherence of Pn is greater than that for Pg. 81 refs., 92 figs., 5 tabs.

  18. IRSN's monitoring strategy for former uranium mining sites: regional radiological report approach

    Energy Technology Data Exchange (ETDEWEB)

    Audrey, L.L.; Marie-Odile, G.; Damien, T. [Institut de radioportection et de surete nucleaire - IRSN (France)

    2014-07-01

    Radiological monitoring of the environment in France was one of the basic missions assigned to the IRSN upon its creation. It is performed regularly through measurement and sampling networks across France, particularly around nuclear facilities. To supplement this system and increase its effectiveness and utility, IRSN recently began issuing regional baseline reference states using radiological reporting. Application of this reporting is currently underway in regions where uranium was mined. The Dordogne river basin is one of twenty basins impacted by uranium mining. Covering some twenty sites, it was selected by IRSN for its initial mining reporting. The objective is to gain detailed knowledge of the distribution of natural radioactivity related to the presence of uranium and its radioactive decay products, including radium, in mining areas and the river basin in general. This knowledge will supplement data already available as part of AREVA's regulatory site reporting, and provide access to a baseline reference state for radioactivity in the environment at local and regional levels. Since the impact of former uranium mining sites is basically tied to water circulation, sampling projects are designed based on the drainage system. Samples are taken of water, sediment and biological indicators such as fish and aquatic plants. Samples are then analysed to determine uranium, radium and polonium concentration. An initial sampling campaign took place in October 2012. It involved an initial contact with local organisations (Regional Directorate for the Environment, Town and Country Planning and Housing (DREAL), local information and oversight committee (Clis), regional public watershed board (EPIDOR), water agencies, mayors, hunting clubs, fishing federation, farmers, etc.). It will be supplemented by a second sampling campaign in late spring 2013 designed to take into account any local issues, including those associated with local water usage (irrigation, livestock

  19. A Ten Step Protocol and Plan for CCS Site Characterization, Based on an Analysis of the Rocky Mountain Region, USA

    Energy Technology Data Exchange (ETDEWEB)

    McPherson, Brian; Matthews, Vince

    2013-09-15

    This report expresses a Ten-Step Protocol for CO2 Storage Site Characterization, the final outcome of an extensive Site Characterization analysis of the Rocky Mountain region, USA. These ten steps include: (1) regional assessment and data gathering; (2) identification and analysis of appropriate local sites for characterization; (3) public engagement; (4) geologic and geophysical analysis of local site(s); (5) stratigraphic well drilling and coring; (6) core analysis and interpretation with other data; (7) database assembly and static model development; (8) storage capacity assessment; (9) simulation and uncertainty assessment; (10) risk assessment. While the results detailed here are primarily germane to the Rocky Mountain region, the intent of this protocol is to be portable or generally applicable for CO2 storage site characterization.

  20. REGIONAL HYDROLOGY OF THE NOPAL I SITE, SIERRA DE PENA BLANCA, CHIHUAHUA, MEXICO

    Energy Technology Data Exchange (ETDEWEB)

    J.A. Rodriguez-Pineda; P. Goodell; P.F. Dobson; J. Walton; R. Oliver; De La Garza; S. Harder

    2005-07-11

    The U.S. Department of Energy sponsored the drilling of three wells in 2003 near the Nopal I uranium deposit at the Sierra Pena Blanca, Chihuahua, Mexico. Piezometric information is being collected to understand groundwater flow at local and regional levels as part of an ongoing natural analogue study of radionuclide migration. Water level monitoring reported at these and other wells in the region is combined with archival data to provide a better understanding of the hydrology at Nopal I. Initial results suggest that the local hydrology is dependent on the regional hydrologic setting and that this groundwater system behaves as an unconfined aquifer. The region is dominated by an alternating sequence of highlands and basins that step down from west to east. The Sierra de Pena Blanca was downdropped from the cratonic block to the west during Cenozoic extension. The Nopal I area is near the intersection of two large listric faults, and the questa of ash flow tuffs that hosts the deposit has been subjected to complex structural events. The Pena Blanca Uranium District was originally characterized by 105 airborne radiometric anomalies, indicating widespread uranium mineralization. The Nopal I uranium deposit is located in the Sierra del Pena Blanca between the Encinillas Basin to the west, with a mean elevation of 1560 m, and the El Cuervo Basin to the east, with a mean elevation of 1230 m. The Nopal I + 10 level is at an intermediate elevation of 1463 m, with a corresponding groundwater elevation of approximately 1240 m. The regional potentiometric surface indicates flow from west to east, with the El Cuervo Basin being the discharge zone for the regional flow system. However, it appears that the local groundwater potential beneath the Nopal I site is more in accordance with the water table of the El Cuervo Basin than with that of the Encinillas Basin. This might indicate that there is limited groundwater flow between the Encinillas Basin and the Nopal I area.

  1. REGIONAL HYDROLOGY OF THE NOPAL I SITE, SIERRA DE PENA BLANCA, CHIHUAHUA, MEXICO

    International Nuclear Information System (INIS)

    Rodriguez-Pineda, J.A.; Goodell, P.; Dobson, P.F.; Walton, J.; Oliver, R.; De La Garza; Harder, S.

    2005-01-01

    The U.S. Department of Energy sponsored the drilling of three wells in 2003 near the Nopal I uranium deposit at the Sierra Pena Blanca, Chihuahua, Mexico. Piezometric information is being collected to understand groundwater flow at local and regional levels as part of an ongoing natural analogue study of radionuclide migration. Water level monitoring reported at these and other wells in the region is combined with archival data to provide a better understanding of the hydrology at Nopal I. Initial results suggest that the local hydrology is dependent on the regional hydrologic setting and that this groundwater system behaves as an unconfined aquifer. The region is dominated by an alternating sequence of highlands and basins that step down from west to east. The Sierra de Pena Blanca was downdropped from the cratonic block to the west during Cenozoic extension. The Nopal I area is near the intersection of two large listric faults, and the questa of ash flow tuffs that hosts the deposit has been subjected to complex structural events. The Pena Blanca Uranium District was originally characterized by 105 airborne radiometric anomalies, indicating widespread uranium mineralization. The Nopal I uranium deposit is located in the Sierra del Pena Blanca between the Encinillas Basin to the west, with a mean elevation of 1560 m, and the El Cuervo Basin to the east, with a mean elevation of 1230 m. The Nopal I + 10 level is at an intermediate elevation of 1463 m, with a corresponding groundwater elevation of approximately 1240 m. The regional potentiometric surface indicates flow from west to east, with the El Cuervo Basin being the discharge zone for the regional flow system. However, it appears that the local groundwater potential beneath the Nopal I site is more in accordance with the water table of the El Cuervo Basin than with that of the Encinillas Basin. This might indicate that there is limited groundwater flow between the Encinillas Basin and the Nopal I area

  2. Photochemical processing of organic aerosol at nearby continental sites: contrast between urban plumes and regional aerosol

    Directory of Open Access Journals (Sweden)

    J. G. Slowik

    2011-03-01

    Full Text Available As part of the BAQS-Met 2007 field campaign, Aerodyne time-of-flight aerosol mass spectrometers (ToF-AMS were deployed at two sites in southwestern Ontario from 17 June to 11 July 2007. One instrument was located at Harrow, ON, a rural, agriculture-dominated area approximately 40 km southeast of the Detroit/Windsor/Windsor urban area and 5 km north of Lake Erie. The second instrument was located at Bear Creek, ON, a rural site approximately 70 km northeast of the Harrow site and 50 km east of Detroit/Windsor. Positive matrix factorization analysis of the combined organic mass spectral dataset yields factors related to secondary organic aerosol (SOA, direct emissions, and a factor tentatively attributed to the reactive uptake of isoprene and/or condensation of its early generation reaction products. This is the first application of PMF to simultaneous AMS measurements at different sites, an approach which allows for self-consistent, direct comparison of the datasets. Case studies are utilized to investigate processing of SOA from (1 fresh emissions from Detroit/Windsor and (2 regional aerosol during periods of inter-site flow. A strong correlation is observed between SOA/excess CO and photochemical age as represented by the NOx/NOy ratio for Detroit/Windsor outflow. Although this correlation is not evident for more aged air, measurements at the two sites during inter-site transport nevertheless show evidence of continued atmospheric processing by SOA production. However, the rate of SOA production decreases with airmass age from an initial value of ~10.1 μg m−3 ppmvCO−1 h−1 for the first ~10 h of plume processing to near-zero in an aged airmass (i.e. after several days. The initial SOA production rate is comparable to the observed rate in Mexico City over similar timescales.

  3. The non-random clustering of non-synonymous substitutions and its relationship to evolutionary rate

    Directory of Open Access Journals (Sweden)

    Stone Eric A

    2011-08-01

    Full Text Available Abstract Background Protein sequences are subject to a mosaic of constraint. Changes to functional domains and buried residues, for example, are more apt to disrupt protein structure and function than are changes to residues participating in loops or exposed to solvent. Regions of constraint on the tertiary structure of a protein often result in loose segmentation of its primary structure into stretches of slowly- and rapidly-evolving amino acids. This clustering can be exploited, and existing methods have done so by relying on local sequence conservation as a signature of selection to help identify functionally important regions within proteins. We invert this paradigm by leveraging the regional nature of protein structure and function to both illuminate and make use of genome-wide patterns of local sequence conservation. Results Our hypothesis is that the regional nature of structural and functional constraints will assert a positive autocorrelation on the evolutionary rates of neighboring sites, which, in a pairwise comparison of orthologous proteins, will manifest itself as the clustering of non-synonymous changes across the amino acid sequence. We introduce a dispersion ratio statistic to test this and related hypotheses. Using genome-wide interspecific comparisons of orthologous protein pairs, we reveal a strong log-linear relationship between the degree of clustering and the intensity of constraint. We further demonstrate how this relationship varies with the evolutionary distance between the species being compared. We provide some evidence that proteins with a history of positive selection deviate from genome-wide trends. Conclusions We find a significant association between the evolutionary rate of a protein and the degree to which non-synonymous changes cluster along its primary sequence. We show that clustering is a non-redundant predictor of evolutionary rate, and we speculate that conflicting signals of clustering and constraint may

  4. New aspects in distribution of population dose loads in Semipalatinsk Nuclear Test Site region

    International Nuclear Information System (INIS)

    Hill, P.; Pivovarov, S.; Rukhin, A.; Seredavina, T.; Sushkova, N.

    2008-01-01

    Full text: The question on dose loads of Semipalatinsk Nuclear Test Site (SNTS) region population is not fully solved till now. There is rather different estimations of doses, received by people of nearest to SNTS settlements. It may be explain by absence of individual dosimeters during and after nuclear weapon tests and also many various ways of radiation exposure receiving. During last some years we have done a people dose loads estimations by Electron Paramagnetic Resonance (EPR) tooth enamel dosimetry method - one of the best and reliable for retrospective dosimetry. It was studied tooth enamel people from settlements Dolon, Bodene, Cheremushki, Mostik, which was irradiated mainly by the first atomic explosion 1949, settlement Sarjal, irradiated by the first thermonuclear explosion in 1953, and control settlement Maysk, which is sited close to SNTS, but there was no any radioactive traces due to east wind. The results display a not expected rather surprising picture: in all settlements, including control one Maysk, the dose loads distribution was rather similar, it has ex fast bimodal form with rather high doses in the second one. The possible reasons of such situation is discussed. The results obtained is compared with last estimations of Semipalatinsk region dose loads of population, which were specially attentively discussed at International Symposiums in Hiroshima (Japan, 2005) and Bethesda (MD, USA, 2006). (author)

  5. The peculiarities of dermatitis pathology in the region of Semipalatinsk test site

    International Nuclear Information System (INIS)

    Zhunusova, A.K.

    1994-01-01

    Disease incidence of dermatitis of Semipalatinsk region population had been studied. Discovering of interconnection of disease incidence with factors of test site influence was being carried out on the data of hospitalization in the skin departments of region dispensaries for 1989-1992 period. The main quantity of treating patients were hospitalizing from districts which involved in the zones of extreme and maximum radiation risk: Zhanasemejskij (41,3 %), Abajskij (32,6 %) and Beskaragajskij (26,8 %).It was find out, that treating patients were aboriginal people of these districts and they were being exposed continual influence of ionizing radiation in the different doses. Entrance of radionuclides in water and food also played definite role. It was determined that skinning pathology was in 1,5-2,5 above than in the other districts and for the main part was being observed for men till 40 age (58,9 %), which were born in the period of direct activity of Semipalatinsk test site

  6. Evaluation of Landfill Cover Design Options for Waste Disposal Sites in the Coastal Regions of Ghana

    Directory of Open Access Journals (Sweden)

    Kodwo Beedu Keelson

    2015-01-01

    Full Text Available Uncontrolled leachate generation from operational and closed waste disposal sites is a major environmental concern in the coastal regions of Ghana which have abundant surface water and groundwater resources. The Ghana Landfill Guidelines requires the provision of a final cover or capping system as part of a final closure plan for waste disposal sites in the country as a means of minimizing the harmful environmental effects of these emissions. However, this technical manual does not provide explicit guidance on the material types or configuration for landfill covers that would be suitable for the different climatic conditions in the country. Four landfill cover options which are based on the USEPA RCRA-type and evapotranspirative landfill cover design specifications were evaluated with the aid of the HELP computer program to determine their suitability for waste disposal sites located in the Western, Central and Greater Accra regions. The RCRA Subtitle C cover which yielded flux rates of less than 0.001 mm/yr was found to be suitable for the specific climatic conditions. The RCRA Subtitle D cover was determined to be unsuitable due to the production of very large flux rates in excess of 200 mm/yr. The results for the anisotropic barrier and capillary barrier covers were inconclusive. Recommendations for further study include a longer simulation period as well the study of the combined effects of different topsoil vegetative conditions and evaporative zone depths on the landfill water balance. The use of other water balance models such as EPIC, HYDRUS-2D and UNSAT-H for the evaluation of the evapotranspirative landfill cover design options should also be considered.

  7. Regional hydrogeological simulations using CONECTFLOW. Preliminary site description. Laxemar sub area - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Hartley, Lee; Hunter, Fiona; Jackson, Peter; McCarthy, Rachel [Serco Assurance, Risley (United Kingdom); Gylling, Bjoern; Marsic, Niko [Kemakta Konsult AB, Stockholm (Sweden)

    2006-04-15

    The main objective of this study is to support the development of a preliminary Site Description of the Laxemar subarea on a regional-scale based on the available data of November 2004 (Data Freeze L1.2). A more specific objective of this study is to assess the role of both known and less quantified hydrogeological conditions in determining the present-day distribution of saline groundwater in the Laxemar subarea on a regional-scale. An improved understanding of the palaeo-hydrogeology is necessary in order to gain credibility for the Site Description in general and the hydrogeological description in particular. This is to serve as a basis for describing the present hydrogeological conditions on a local-scale, as well as predictions of future hydrogeological conditions. Another objective is to assess the flow-paths from the local-scale model domain, based on the present-day flow conditions, to assess the distribution of discharge and recharge areas connected to the flow at the approximate repository depth to inform the Preliminary Safety Evaluation. Significant new features incorporated in the modelling include: a depth variation in hydraulic properties within the deformation zones; a dependence on rock domain and depth in the rock mass properties in regional-scale models; a more detailed model of the overburden in terms of a layered system of spatially variable thickness made up of several different types of Quaternary deposits has been implemented; and several variants on the position of the watertable have been tried. The motivation for introducing a dependence on rock domain was guided by the hydrogeological interpretation with the aim of honouring the observed differences in hydraulic properties measured at the boreholes.

  8. Regional hydrogeological simulations using CONECTFLOW. Preliminary site description. Laxemar sub area - version 1.2

    International Nuclear Information System (INIS)

    Hartley, Lee; Hunter, Fiona; Jackson, Peter; McCarthy, Rachel; Gylling, Bjoern; Marsic, Niko

    2006-04-01

    The main objective of this study is to support the development of a preliminary Site Description of the Laxemar subarea on a regional-scale based on the available data of November 2004 (Data Freeze L1.2). A more specific objective of this study is to assess the role of both known and less quantified hydrogeological conditions in determining the present-day distribution of saline groundwater in the Laxemar subarea on a regional-scale. An improved understanding of the palaeo-hydrogeology is necessary in order to gain credibility for the Site Description in general and the hydrogeological description in particular. This is to serve as a basis for describing the present hydrogeological conditions on a local-scale, as well as predictions of future hydrogeological conditions. Another objective is to assess the flow-paths from the local-scale model domain, based on the present-day flow conditions, to assess the distribution of discharge and recharge areas connected to the flow at the approximate repository depth to inform the Preliminary Safety Evaluation. Significant new features incorporated in the modelling include: a depth variation in hydraulic properties within the deformation zones; a dependence on rock domain and depth in the rock mass properties in regional-scale models; a more detailed model of the overburden in terms of a layered system of spatially variable thickness made up of several different types of Quaternary deposits has been implemented; and several variants on the position of the watertable have been tried. The motivation for introducing a dependence on rock domain was guided by the hydrogeological interpretation with the aim of honouring the observed differences in hydraulic properties measured at the boreholes

  9. Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins.

    LENUS (Irish Health Repository)

    Morgan, Claire C

    2010-01-01

    ABSTRACT: BACKGROUND: Reproductive proteins are central to the continuation of all mammalian species. The evolution of these proteins has been greatly influenced by environmental pressures induced by pathogens, rival sperm, sexual selection and sexual conflict. Positive selection has been demonstrated in many of these proteins with particular focus on primate lineages. However, the mammalia are a diverse group in terms of mating habits, population sizes and germ line generation times. We have examined the selective pressures at work on a number of novel reproductive proteins across a wide variety of mammalia. RESULTS: We show that selective pressures on reproductive proteins are highly varied. Of the 10 genes analyzed in detail, all contain signatures of positive selection either across specific sites or in specific lineages or a combination of both. Our analysis of SP56 and Col1a1 are entirely novel and the results show positively selected sites present in each gene. Our findings for the Col1a1 gene are suggestive of a link between positive selection and severe disease type. We find evidence in our dataset to suggest that interacting proteins are evolving in symphony: most likely to maintain interacting functionality. CONCLUSION: Our in silico analyses show positively selected sites are occurring near catalytically important regions suggesting selective pressure to maximize efficient fertilization. In those cases where a mechanism of protein function is not fully understood, the sites presented here represent ideal candidates for mutational study. This work has highlighted the widespread rate heterogeneity in mutational rates across the mammalia and specifically has shown that the evolution of reproductive proteins is highly varied depending on the species and interacting partners. We have shown that positive selection and disease are closely linked in the Col1a1 gene.

  10. Natural responses to Quaternary climatic change in the Nevada Test Site region

    International Nuclear Information System (INIS)

    Gibson, J.D.

    1993-01-01

    Migration of hazardous contaminants within geologic settings depends on natural processes. Climatic fluctuations can affect the magnitudes and rates of many of these processes. In any long-term environmental evaluation of natural processes, responses to climatic change must be considered. Four generalized categories of natural responses to Quaternary climatic change are recognized for the Nevada Test Site (NTS) region of southwestern Nevada and adjacent California: (1) biologic, (2) geomorphic, (3) hydrologic (including surface and subsurface) and (4) pedologic/diagenetic. Specific examples that correspond to the four categories illustrate the broad range of complex natural processes the are affected by climatic change. These responses dictate the potential effects of climatic change on contaminant transport, effects that are being examined by existing and planned environmental-restoration and waste-management programs within the region. Regulatory requirements for many of these programs include long-term (>10,000-year) waste isolation because of radiologic components. The purpose here is not to be exhaustive in documenting all known natural responses to climatic change in the NTS region, but rather to give a flavor of the scope of interdisciplinary and interrelated fields of Quaternary science that must be considered in evaluating the possible effects of climatic change on long-term environmental programs

  11. National survey of crystalline rocks and recommendations of regions to be explored for high-level radioactive waste repository sites

    International Nuclear Information System (INIS)

    Smedes, H.W.

    1983-04-01

    A reconnaissance of the geological literature on large regions of exposed crystalline rocks in the United States provides the basis for evaluating if any of those regions warrant further exploration toward identifying potential sites for development of a high-level radioactive waste repository. The reconnaissance does not serve as a detailed evaluation of regions or of any smaller subunits within the regions. Site performance criteria were selected and applied insofar as a national data base exists, and guidelines were adopted that relate the data to those criteria. The criteria include consideration of size, vertical movements, faulting, earthquakes, seismically induced ground motion, Quaternary volcanic rocks, mineral deposits, high-temperature convective ground-water systems, hydraulic gradients, and erosion. Brief summaries of each major region of exposed crystalline rock, and national maps of relevant data provided the means for applying the guidelines and for recommending regions for further study. It is concluded that there is a reasonable likelihood that geologically suitable repository sites exist in each of the major regions of crystalline rocks. The recommendation is made that further studies first be conducted of the Lake Superior, Northern Appalachian and Adirondack, and the Southern Appalachian Regions. It is believed that those regions could be explored more effectively and suitable sites probably could be found, characterized, verified, and licensed more readily there than in the other regions

  12. National survey of crystalline rocks and recommendations of regions to be explored for high-level radioactive waste repository sites

    Energy Technology Data Exchange (ETDEWEB)

    Smedes, H.W.

    1983-04-01

    A reconnaissance of the geological literature on large regions of exposed crystalline rocks in the United States provides the basis for evaluating if any of those regions warrant further exploration toward identifying potential sites for development of a high-level radioactive waste repository. The reconnaissance does not serve as a detailed evaluation of regions or of any smaller subunits within the regions. Site performance criteria were selected and applied insofar as a national data base exists, and guidelines were adopted that relate the data to those criteria. The criteria include consideration of size, vertical movements, faulting, earthquakes, seismically induced ground motion, Quaternary volcanic rocks, mineral deposits, high-temperature convective ground-water systems, hydraulic gradients, and erosion. Brief summaries of each major region of exposed crystalline rock, and national maps of relevant data provided the means for applying the guidelines and for recommending regions for further study. It is concluded that there is a reasonable likelihood that geologically suitable repository sites exist in each of the major regions of crystalline rocks. The recommendation is made that further studies first be conducted of the Lake Superior, Northern Appalachian and Adirondack, and the Southern Appalachian Regions. It is believed that those regions could be explored more effectively and suitable sites probably could be found, characterized, verified, and licensed more readily there than in the other regions.

  13. Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid.

    Science.gov (United States)

    Babbitt, Gregory A; Alawad, Mohammed A; Schulze, Katharina V; Hudson, André O

    2014-01-01

    While mRNA stability has been demonstrated to control rates of translation, generating both global and local synonymous codon biases in many unicellular organisms, this explanation cannot adequately explain why codon bias strongly tracks neighboring intergene GC content; suggesting that structural dynamics of DNA might also influence codon choice. Because minor groove width is highly governed by 3-base periodicity in GC, the existence of triplet-based codons might imply a functional role for the optimization of local DNA molecular dynamics via GC content at synonymous sites (≈GC3). We confirm a strong association between GC3-related intrinsic DNA flexibility and codon bias across 24 different prokaryotic multiple whole-genome alignments. We develop a novel test of natural selection targeting synonymous sites and demonstrate that GC3-related DNA backbone dynamics have been subject to moderate selective pressure, perhaps contributing to our observation that many genes possess extreme DNA backbone dynamics for their given protein space. This dual function of codons may impose universal functional constraints affecting the evolution of synonymous and non-synonymous sites. We propose that synonymous sites may have evolved as an 'accessory' during an early expansion of a primordial genetic code, allowing for multiplexed protein coding and structural dynamic information within the same molecular context. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  14. U.S. Environmental Protection Agency, Region 6 National Priorities List (NPL) Sites - 05/12/2014

    Data.gov (United States)

    U.S. Environmental Protection Agency — Point locations for sites in U.S. Environmental Protection Agency, Region 6 which are documented as being part of the National Priorities List as of May 12, 2014....

  15. Working group 4a: Regional aspects. Nuclear power plants siting in the dutch speaking part of the country

    International Nuclear Information System (INIS)

    Willems, M.; Medart, R.; Vanneste, O.

    1976-01-01

    The problems due to nuclear plant siting in the northern region of Belgium are reviewed with an emphasis on economical, environmental and esthetical aspects. Three types of sitings were analysed: inland, coastal and off-shore. For the in-land siting, Doel, where already two units are in operation (780 MWe) and a third in construction (900 MWe), is supposed to be able to receive a fourth unit of 1000 MWe. The coastal siting is practically impossible for two reasons: the lack of cooling water when a coastal inland region of 5 km is considered and the strong density of tourists on the 66 km coast. For artificial island siting the different aspects are considered: type of soil, marine environment, construction factors, security, construction time, costs, etc. A comparative study for 9 off-shore sites is presented. (A.F.)

  16. Screening of CHP Potential at Federal Sites in Select Regions of the U.S.

    Energy Technology Data Exchange (ETDEWEB)

    Energy Nexus Group, . .

    2002-02-25

    Combined Cooling Heat and Power (CHP) is a master term for onsite power generation technologies that sequentially produce electrical or mechanical energy and useful thermal energy. Some form of CHP has existed for more than 100 years and it is now achieving a greater level of acceptance due to an increasing need for reliable power service and energy cost management. Capturing and using the heat produced as a byproduct of generating electricity from fuel sources increases the usable energy that can be obtained from the original fuel source. CHP technologies have the potential to reduce energy consumption through increased efficiency--decreasing energy bills as well as pollution. The EPA recognizes CHP as a potent climate change mitigation measure. The U.S. Department of Energy (D.O.E.) Federal Energy Management Program (FEMP) is assisting Federal agencies to realize their energy efficiency goals. CHP is an efficiency measure that is receiving growing attention because of its sizable potential to provide efficiency, environmental, and reliability benefits. CHP therefore benefits the host facility, the electric infrastructure, and the U.S. society as a whole. This report and study seeks to make a preliminary inquiry into near term CHP opportunities for federal facilities in selected U.S. regions. It offers to help focus the attention of policy makers and energy facility managers on good candidate facilities for CHP. First, a ranked list of high potential individual sites is identified. Then, several classes of federal facilities are identified for the multiple opportunities they offer as a class. Recommendations are then offered for appropriate next steps for the evaluation and cost effective implementation of CHP. This study was designed to ultimately rank federal facilities in terms of their potential to take advantage of CHP economic and external savings in the near term. In order to best serve the purposes of this study, projections have been expressed in terms of

  17. Numerical groundwater flow calculations at the Finnsjoen study site - The influence of the regional gradient

    International Nuclear Information System (INIS)

    Lindbom, B.; Boghammar, A.

    1992-04-01

    The present report describes the modelling efforts of the groundwater flow situation at the Finnsjoen site in northern Uppland, approximately 140 km north of Stockholm. The study forms part of the SKB 91 performance assessment project, and aims at describing the model sensitivity to changes in the prevailing regional gradient, as well as the local, with regard to both direction and magnitude. Particular emphasis has been put into the evaluation of travel times and travel paths form a potential repository, and also on flux values at repository level. The analyses were based on the finite element technique and made use of the NAMMU-code for stationary calculations in three dimensions. The fracture zones within the modelled area were modelled implicitly with an averaging technique. (au)

  18. Forest decline research in Northrhine-Westphalia at the regional research site Eggegebirge/Velmerstot

    International Nuclear Information System (INIS)

    Prinz, B.; Koeth, I.; Krause, G.H.M.; Thiele, V.

    1989-01-01

    In 1984 Northrhine Westfalia established a research program 'Air Pollution and Forest Decline'. Results of various experiments, carried out on the level of 1. epidemiological observations, 2. semi-controlled experiments in open-to-chambers as well as 3. controlled fumigation experiments are presented as an overview. Emphasis is put on field experiments at the regional research site Eggegebirge/Velmerstot, where the Landesanstalt fuer Immissionsschutz analysed among others yearly nutrient cycling and leaching phenomena of injured and healthy spruce trees (type: montanious yellowing). Deposition measurements were carried on a horizontal and vertical trajectory outside and inside a young spruce stand. Preliminary results showed that atmospheric acidic deposition accounts only for 1/3 of the acidification of the soil within the stand, where acidification processes are most prevalent. (orig.) [de

  19. Brookhaven Regional Energy Facility Siting Model (REFS): model development and application

    Energy Technology Data Exchange (ETDEWEB)

    Meier, P.; Hobbs, B.; Ketcham, G.; McCoy, M.; Stern, R.

    1979-06-01

    A siting methodology developed specifically to bridge the gap between regional-energy-system scenarios and environmental transport models is documented. Development of the model is described in Chapter 1. Chapter 2 described the basic structure of such a model. Additional chapters on model development cover: generation, transmission, demand disaggregation, the interface to other models, computational aspects, the coal sector, water resource considerations, and air quality considerations. These subjects comprise Part I. Part II, Model Applications, covers: analysis of water resource constraints, water resource issues in the New York Power Pool, water resource issues in the New England Power Pool, water resource issues in the Pennsylvania-Jersey-Maryland Power Pool, and a summary of water resource constraint analysis. (MCW)

  20. Introduction of a glycosylation site in the constant region decreases the aggregation of adalimumab Fab.

    Science.gov (United States)

    Nakamura, Hitomi; Oda-Ueda, Naoko; Ueda, Tadashi; Ohkuri, Takatoshi

    2018-06-18

    The production of therapeutic monoclonal antibodies is costly; therefore, antigen-binding fragments (Fabs) can be used instead. However, their tendency toward aggregation can reduce the half-life in the plasma and the therapeutic effectiveness. To examine the effect of glycosylation on the properties of the Fab of a therapeutic antibody, an N-glycosylation site was introduced at position 178 of the H-chain constant region of adalimumab Fab through site-directed mutagenesis of L178 N (H:L178 N Fab), and then H:L178 N Fab was expressed in Pichia pastoris. SDS-PAGE analysis with treatment of N-glycosidase F or periodic acid-Schiff reagent showed that H:L178 N Fab contained a relatively low glycan level. Moreover, the H:L178 N mutation did not decrease the binding activity and thermal stability of Fab, and H:L178 N Fab was more resistant to protease digestion than wild-type Fab. The aggregation of Fab induced by pH-shift stress was measured by monitoring the optical density at 350 nm. Although the wild-type Fab showed a large increase in optical density with an increase of protein concentration, no such increase of turbidity during aggregation was found in H:L178 N Fab. These results demonstrated that glycosylation at position 178 of the H-chain constant region of adalimumab Fab can prevent protein aggregation, and therefore serve as a potentially effective platform for drug development. Copyright © 2018. Published by Elsevier Inc.

  1. Uranium-thorium dating of quaternary carbonate accumulations in the Nevada Test Site region, southern Nevada

    International Nuclear Information System (INIS)

    Szabo, B.J.; Carr, W.J.; Gottschall, W.C.

    1981-01-01

    A useful way to approach the problem of tectonic activity in an arid region is through study of the history of movement of faults and fractures and of the young alluvial material they displace. Easily datable materials are scarce in these deposits, but carbonates such as caliche, calcrete, travertine, calcite vein, and tufa are common. Several types of these carbonates from the Nevada Test Site area in the southern Great Basin have been collected and dated by the uranium-series method. A variety of geologic settings are represented. The carbonate samples were subjected to a complex treatment process, and the resulting preparations were counted on an alpha spectrometer. Some of the samples from obviously closed systems yielded reasonable ages; others gave only a minimum age for a material or event. Many of the ages obtained agree well with estimates of age determined from dated volcanic units, fault-scarp morphology, and displaced alluvial units. Among the significant ages obtained were three dates of greater than 400,000 years on calcite-filling fractures above and below the water table in an exploratory drill hole for a possible candidate nuclear waste repository site at Yucca Mountain. Another date on calcrete from immediately below the youngest basalt in the region gave an age of 345,000 years, which agrees extremely well with the K-Ar age determined for the basalt of about 300,000 years. Undisturbed travertine that fills faults in several areas gave ages from about 75,000 years to greater than 700,000 years. Soil caliche and calcretes slightly displaced or broken by repeated movement on faults gave minimum ages in the range from more than 5000 to more than about 25,000 years

  2. Strategic siting and regional grid interconnections key to low-carbon futures in African countries

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Grace C. [Univ. of California, Berkeley, CA (United States). Energy and Resources Group; Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). International Energy Studies Group; Deshmukh, Ranjit [Univ. of California, Berkeley, CA (United States). Energy and Resources Group; Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). International Energy Studies Group; Ndhlukula, Kudakwashe [Namibia Univ. of Science and Technology, Windhoek, (Namibia). Southern Africa Development Community (SADC) Centre for Renewable Energy and Energy Efficiency; Radojicic, Tijana [International Renewable Energy Agency, Masdar City, Abu Dhabi (United Arab Emirates); Reilly-Moman, Jessica [Univ. of California, Berkeley, CA (United States). Energy and Resources Group; Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). International Energy Studies Group; Phadke, Amol [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). International Energy Studies Group; Kammen, Daniel M. [Univ. of California, Berkeley, CA (United States). Energy and Resources Group; Callaway, Duncan S. [Univ. of California, Berkeley, CA (United States). Energy and Resources Group

    2017-03-27

    Recent forecasts suggest that African countries must triple their current electricity generation by 2030. Our multicriteria assessment of wind and solar potential for large regions of Africa shows how economically competitive and low-environmental– impact renewable resources can significantly contribute to meeting this demand. We created the Multicriteria Analysis for Planning Renewable Energy (MapRE) framework to map and characterize solar and wind energy zones in 21 countries in the Southern African Power Pool (SAPP) and the Eastern Africa Power Pool (EAPP) and find that potential is several times greater than demand in many countries. Significant fractions of demand can be quickly served with “no-regrets” options—or zones that are low-cost, low-environmental impact, and highly accessible. Because no-regrets options are spatially heterogeneous, international interconnections are necessary to help achieve low-carbon development for the region as a whole, and interconnections that support the best renewable options may differ from those planned for hydropower expansion. Additionally, interconnections and selecting wind sites to match demand reduce the need for SAPP-wide conventional generation capacity by 9.5% in a high-wind scenario, resulting in a 6–20% cost savings, depending on the avoided conventional technology. Strategic selection of low-impact and accessible zones is more cost effective with interconnections compared with solutions without interconnections. In conclusion, the overall results are robust to multiple load growth scenarios. Together, results show that multicriteria site selection and deliberate planning of interconnections may significantly increase the economic and environmental competitiveness of renewable alternatives relative to conventional generation.

  3. Strategic siting and regional grid interconnections key to low-carbon futures in African countries.

    Science.gov (United States)

    Wu, Grace C; Deshmukh, Ranjit; Ndhlukula, Kudakwashe; Radojicic, Tijana; Reilly-Moman, Jessica; Phadke, Amol; Kammen, Daniel M; Callaway, Duncan S

    2017-04-11

    Recent forecasts suggest that African countries must triple their current electricity generation by 2030. Our multicriteria assessment of wind and solar potential for large regions of Africa shows how economically competitive and low-environmental-impact renewable resources can significantly contribute to meeting this demand. We created the Multicriteria Analysis for Planning Renewable Energy (MapRE) framework to map and characterize solar and wind energy zones in 21 countries in the Southern African Power Pool (SAPP) and the Eastern Africa Power Pool (EAPP) and find that potential is several times greater than demand in many countries. Significant fractions of demand can be quickly served with "no-regrets" options-or zones that are low-cost, low-environmental impact, and highly accessible. Because no-regrets options are spatially heterogeneous, international interconnections are necessary to help achieve low-carbon development for the region as a whole, and interconnections that support the best renewable options may differ from those planned for hydropower expansion. Additionally, interconnections and selecting wind sites to match demand reduce the need for SAPP-wide conventional generation capacity by 9.5% in a high-wind scenario, resulting in a 6-20% cost savings, depending on the avoided conventional technology. Strategic selection of low-impact and accessible zones is more cost effective with interconnections compared with solutions without interconnections. Overall results are robust to multiple load growth scenarios. Together, results show that multicriteria site selection and deliberate planning of interconnections may significantly increase the economic and environmental competitiveness of renewable alternatives relative to conventional generation.

  4. The Study of Synonymous Word "Mistake"

    OpenAIRE

    Suwardi, Albertus

    2016-01-01

    This article discusses the synonymous word "mistake*.The discussion will also cover the meaning of 'word' itself. Words can be considered as form whether spoken or written, or alternatively as composite expression, which combine and meaning. Synonymous are different phonological words which have the same or very similar meanings. The synonyms of mistake are error, fault, blunder, slip, slipup, gaffe and inaccuracy. The data is taken from a computer program. The procedure of data collection is...

  5. Thermophysical properties of the MER and Beagle II landing site regions on Mars

    Science.gov (United States)

    Jakosky, Bruce M.; Hynek, Brian M.; Pelkey, Shannon M.; Mellon, Michael T.; Martínez-Alonso, Sara; Putzig, Nathaniel E.; Murphy, Nate; Christensen, Philip R.

    2006-08-01

    We analyzed remote-sensing observations of the Isidis Basin, Gusev Crater, and Meridiani Planum landing sites for Beagle II, MER-A Spirit, and MER-B Opportunity spacecraft, respectively. We emphasized the thermophysical properties using daytime and nighttime radiance measurements from the Mars Global Surveyor (MGS) Thermal Emission Spectrometer and Mars Odyssey Thermal Emission Imaging System (THEMIS) and thermal inertias derived from nighttime data sets. THEMIS visible images, MGS Mars Orbiter Camera (MOC) narrow-angle images, and MGS Mars Orbiter Laser Altimeter (MOLA) data are incorporated as well. Additionally, the remote-sensing data were compared with ground-truth at the MER sites. The Isidis Basin surface layer has been shaped by aeolian processes and erosion by slope winds coming off of the southern highlands and funneling through notches between massifs. In the Gusev region, surface materials of contrasting thermophysical properties have been interpreted as rocks or bedrock, duricrust, and dust deposits; these are consistent with a complex geological history dominated by volcanic and aeolian processes. At Meridiani Planum the many layers having different thermophysical and erosional properties suggest periodic deposition of differing sedimentological facies possibly related to clast size, grain orientation and packing, or mineralogy.

  6. Region-scale groundwater flow modelling of generic high level waste disposal sites

    International Nuclear Information System (INIS)

    Metcalfe, D.

    1996-02-01

    Regional-scale groundwater flow modelling analyses are performed on generic high level waste (HLW) disposal sites to assess the extent to which a large crystalline rock mass such as a pluton or batholith can be expected to contain and isolate HLW in terms of hydraulic considerations, for a variety of geologic and hydrogeologic conditions. The two-dimensional cross-sectional conceptual models of generic HLW disposal sites are evaluated using SWIFT III, which is a finite-difference flow and transport code. All steps leading to the final results and conclusions are incorporated in this report. The available data and information on geological and hydrogeologic conditions in plutons and batholiths are summarized. The generic conceptual models developed from this information are defined in terms of the finite difference grid, the geologic and hydrogeologic properties and the hydrologic boundary conditions used. The modelled results are described with contour maps showing the modelled head fields, groundwater flow paths and travel times and groundwater flux rates within the modelled systems. The results of the modelling analyses are used to develop general conclusions on the scales and patterns of groundwater flow in granitic plutons and batholiths. The conclusions focus on geologic and hydrogeologic characteristics that can result in favourable conditions, in terms of hydraulic considerations, for a HLW repository. (author) 43 refs., 9 tabs., 40 figs

  7. Regional chemical setting of the Apollo 16 landing site and the importance of the Kant Plateau

    Science.gov (United States)

    Andre, C. G.; El-Baz, F.

    1982-01-01

    Orbital X-ray data from the Apollo 16 region indicate that physiographic units identified before the lunar mission can be classified as chemical units as well. The Descartes Mountains, however, appear to be an extension of the Kant Plateau composition that is unusually anorthositic and resembles farside terra. The Cayley Plains have closer affinities to basaltic materials than terra materials, physically, spectrally and chemically. The Theophilus impact, 330 km east of the landing site, excavated magnesium-rich basalts from below less-magnesian flows in Mare Nectaris; but, mafic ejecta was substantially blocked from the Apollo 16 site by the Kant Plateau that rises 5 km above the level of the mare. Apollo 16 soil samples from stations selected to collect either Descartes Mountains material or Cayley Plains material were surprisingly similar. However, they do, indeed, show the chemical trends indicative of the two units as defined by the orbiting geochemistry detectors. The Kant Plateau and Descartes Mountains material may be among the rare nearside examples of a plagioclase-rich cumulate of the primordial magma ocean.

  8. Source origin of trace elements in PM from regional background, urban and industrial sites of Spain

    Science.gov (United States)

    Querol, X.; Viana, M.; Alastuey, A.; Amato, F.; Moreno, T.; Castillo, S.; Pey, J.; de la Rosa, J.; Sánchez de la Campa, A.; Artíñano, B.; Salvador, P.; García Dos Santos, S.; Fernández-Patier, R.; Moreno-Grau, S.; Negral, L.; Minguillón, M. C.; Monfort, E.; Gil, J. I.; Inza, A.; Ortega, L. A.; Santamaría, J. M.; Zabalza, J.

    Despite their significant role in source apportionment analysis, studies dedicated to the identification of tracer elements of emission sources of atmospheric particulate matter based on air quality data are relatively scarce. The studies describing tracer elements of specific sources currently available in the literature mostly focus on emissions from traffic or large-scale combustion processes (e.g. power plants), but not on specific industrial processes. Furthermore, marker elements are not usually determined at receptor sites, but during emission. In our study, trace element concentrations in PM 10 and PM 2.5 were determined at 33 monitoring stations in Spain throughout the period 1995-2006. Industrial emissions from different forms of metallurgy (steel, stainless steel, copper, zinc), ceramic and petrochemical industries were evaluated. Results obtained at sites with no significant industrial development allowed us to define usual concentration ranges for a number of trace elements in rural and urban background environments. At industrial and traffic hotspots, average trace metal concentrations were highest, exceeding rural background levels by even one order of magnitude in the cases of Cr, Mn, Cu, Zn, As, Sn, W, V, Ni, Cs and Pb. Steel production emissions were linked to high levels of Cr, Mn, Ni, Zn, Mo, Cd, Se and Sn (and probably Pb). Copper metallurgy areas showed high levels of As, Bi, Ga and Cu. Zinc metallurgy was characterised by high levels of Zn and Cd. Glazed ceramic production areas were linked to high levels of Zn, As, Se, Zr, Cs, Tl, Li, Co and Pb. High levels of Ni and V (in association) were tracers of petrochemical plants and/or fuel-oil combustion. At one site under the influence of heavy vessel traffic these elements could be considered tracers (although not exclusively) of shipping emissions. Levels of Zn-Ba and Cu-Sb were relatively high in urban areas when compared with industrialised regions due to tyre and brake abrasion, respectively.

  9. Radioecological characterization of a uranium mining site located in a semi-arid region in Brazil

    International Nuclear Information System (INIS)

    Fernandes, Horst M.; Lamego Simoes Filho, F. Fernando; Perez, Valeska; Franklin, Mariza Ramalho; Gomiero, Luiz Alberto

    2006-01-01

    The work presents the radioecological characterization of the new Brazilian uranium mining and milling site located in a semi-arid region of the country. The process characterization demonstrated that in heap leach plants most of the 226 Ra remains in the leached ore. Despite the potential higher availability of radium isotopes in the soils of the studied region the lack of precipitation in that area reduces the leaching/mobilization of the radionuclides. High 226 Ra and 228 Ra concentrations were found in manioc while 21 Pb was significant in pasture. It was suggested that a range from 10 -3 to 10 -1 may conveniently encompass most of the transfer factors (TF) values for soil/plant systems (i.e. involving different cultures, different soils and natural radionuclides). Impacts due to aerial transportation of aerosols and radon generated in the mining were proved to be minimal and restricted to an area not greater than 15 km 2 . Finally, uranium complexation by carbonates was shown to be the main mechanism responding for the elevated radionuclide concentration in groundwater

  10. Clinical and hormonal aspects of reproductive disorders in women from Semipalatinsk test site region

    International Nuclear Information System (INIS)

    Mamedalieva, N.M.; Moshcheeva, A.M.; Nauryzbaeva, B.U.

    1997-01-01

    90 women (62 during pregnancy and 28 out of pregnancy) from different districts of Semipalatinsk region were examined with aims of clinic-hormonal aspects study for reproductive disorders of pregnant from Semipalatinsk test site (STS) region. Age of examined women was within limits 18-40 years old. Patients have from 1 to 4 miscarriage abortions. Particular burdening of somatic, gynaecological and reproductive health of examined women is emphasized. Taking into consideration that among causes of reproductive disorders one of top places takes endocrine disorders the hormone background by content in blood of estradiol, progesterone and thyroid hormones was studied. It was determined, that hormonal disbalance or endocrine deficiency of women from STS during pregnancy and out the time does not guarantee normal course of hesitation process on the very early stages of development. When pregnancy was preserved the hormonal disbalance conducts to disfunction of fete-placental system. High frequency of both the obstetric and the perinatal pathology are caused by mentioned disfunctions

  11. Search for Best Astronomical Observatory Sites in the MENA Region using Satellite Measurements

    International Nuclear Information System (INIS)

    Abdelaziz, G; Guebsi, R; Flamant, C; Guessoum, N

    2017-01-01

    We perform a systematic search for astronomical observatory sites in the MENA (Middle-East and North Africa) region using space-based data for all the relevant factors, i.e. altitude (DEM), cloud fraction (CF), light pollution (NTL), precipitable water vapor (PWV), aerosol optical depth (AOD), relative humidity (RH), wind speed (WS), Richardson Number (RN), and diurnal temperature range (DTR). We look for the best locations overall even where altitudes are low (the threshold that we normally consider being 1,500 m) or where the combination of the afore-mentioned determining factors had previously excluded all locations in a given country. In this aim, we use the rich data that Earth-observing satellites provide, e.g. the Terra and Aqua multi-national NASA research satellites, with their MODIS (Moderate Resolution Imaging Spectroradiometer) and AIRS (Atmospheric Infrared Sounder) instruments, the Defense Meteorological Satellite Program’s Operational Linescan System (DMSP-OLS), and other products from climate diagnostics archives (e.g. MERRA). We present preliminary results on the best locations for the region. (paper)

  12. Search for Best Astronomical Observatory Sites in the MENA Region using Satellite Measurements

    Science.gov (United States)

    Abdelaziz, G.; Guebsi, R.; Guessoum, N.; Flamant, C.

    2017-06-01

    We perform a systematic search for astronomical observatory sites in the MENA (Middle-East and North Africa) region using space-based data for all the relevant factors, i.e. altitude (DEM), cloud fraction (CF), light pollution (NTL), precipitable water vapor (PWV), aerosol optical depth (AOD), relative humidity (RH), wind speed (WS), Richardson Number (RN), and diurnal temperature range (DTR). We look for the best locations overall even where altitudes are low (the threshold that we normally consider being 1,500 m) or where the combination of the afore-mentioned determining factors had previously excluded all locations in a given country. In this aim, we use the rich data that Earth-observing satellites provide, e.g. the Terra and Aqua multi-national NASA research satellites, with their MODIS (Moderate Resolution Imaging Spectroradiometer) and AIRS (Atmospheric Infrared Sounder) instruments, the Defense Meteorological Satellite Program’s Operational Linescan System (DMSP-OLS), and other products from climate diagnostics archives (e.g. MERRA). We present preliminary results on the best locations for the region.

  13. A computer hydrogeologic model of the Nevada Test Site and surrounding region

    International Nuclear Information System (INIS)

    Gillson, R.; Hand, J.; Adams, P.; Lawrence, S.

    1996-01-01

    A three-dimensional, hydrogeologic model of the Nevada Test Site and surrounding region was developed as an element for regional groundwater flow and radionuclide transport models. The hydrogeologic model shows the distribution, thickness, and structural relationships of major aquifers and confining units, as conceived by a team of experts organized by the U.S. Department of Energy Nevada Operations Office. The model was created using Intergraph Corporation's Geographical Information System based Environmental Resource Management Application software. The study area encompasses more than 28,000 square kilometers in southern Nevada and Inyo County, California. Fifty-three geologic cross sections were constructed throughout the study area to provide a framework for the model. The lithology was simplified to 16 hydrostratigraphic units, and the geologic structures with minimal effect on groundwater flow were removed. Digitized cross sections, surface geology, and surface elevation data were the primary sources for the hydrogeologic model and database. Elevation data for the hydrostratigraphic units were posted, contoured, and gridded. Intergraph Corporation's three-dimensional visualization software, VOXEL trademark, was used to view the results interactively. The hydrogeologic database will be used in future flow modeling activities

  14. Complex Approach to Thyroid Screening In Regions Adjacent to the Semipalatinsk Test Site Area

    International Nuclear Information System (INIS)

    Zhumadilov, Zh.Sh.; Musinov, D.R.; Vasikovsky, G.G.; Bobokhidze, D.A.; Zhigitaev, T.K.; Abisheva, G.N.

    1998-01-01

    It has been well documented that the thyroid gland is one of the most radiosensitive of organs, especially when exposure occurs during childhood. It is known as well that childhood exposure to radioactive iodine increases thyroid cancer risk. Conducting thyroid screening in regions adjacent to the Semipalatinsk Test Site (STS) area is very important for medical examination, data management and thyroid dose reconstruction. Our experience of thyroid screening based on our screening projects in Kurchatov and several regions adjacent to STS (more than 4,000 screened patients) allowed to work out the most appropriate screening protocol. A retrospective analysis of the results of surgical treatment of the 7,271 patients with thyroid abnormalities in the Semipalatinsk, Pavlodar and Ust-Kamenogorsk regions of Kazakstan and study the histological staging of 7,271 surgically removed thyroid glands was preceded by our thyroid screening projects. Ours is the first study in the Semipalatinsk region that covers the period 1966-1998.Taking into account the onset of population effective doses during 1962, it was decided to distinguish 6 periods of observation. It is known that basic effective equivalent doses for the majority of the region's population were established by radioactive events in the period 1949-1962. This explains our focus on the year 1962, but thyroid dose reconstruction matter as well as other radiation related problems are still in the progress. We need to get the accurate dosimetry data. Selection of study subjects based on the appropriate criteria needed to be adjusted and clarified in accordance with the main goal of the project and radiation related information. All specialists involved in the thyroid screening project, data management, data analyses and interpretation of the results must be trained and must be highly qualified specialists in this field of science and practice. The experiences in Nagasaki, Hiroshima and Chernobyl, and discussions with

  15. Regional water balance for the Waste Isolation Pilot Plant (WIPP) site and surrounding area

    International Nuclear Information System (INIS)

    Hunter, R.L.

    1985-12-01

    The WIPP water-balance study area defined here comprises approx.2000 mi 2 in Eddy and Lea Counties, southeastern New Mexico. Inflows to the study area are precipitation (roughly 1.47 x 10 6 ac-ft/y), surface water (roughly 1.1 x 10 5 ac-ft/y), water imported by municipalities and industries (roughly 3 x 10 4 ac-ft/y), and ground water (volume not estimated). Outflows from the area are evapotranspiration (roughly 1.5 x 10 6 ac-ft/y), surface water (roughly 1.2 x 10 5 ac-ft/y), and possibly some ground water. The volume of surface and ground water in storage in Nash Draw has increased since the beginning of potash refining. Regional ground-water flow in aquifers above the Salado Formation is from the northeast to the southwest, although this pattern is interrupted by Clayton Basin, Nash Draw, and San Simon Swale. The Pecos River is the only important perennial stream. Most of the area has no integrated surface-water drainage. The available data suggest that approx.1600 mi 2 of the study area are hydrologically separate from Nash Draw and the WIPP site. Ground water north of Highway 180 apparently discharges into Clayton Basin and evaporates. Water in San Simon Swale apparently percolates downward and flows to the southeast. Data are inadequate to create a water budget for the Nash Draw-WIPP site hydrologic system alone, although an attempt to do so can provide guidance for further study

  16. Variability of Mediterranean aerosols properties at three regional background sites in the western Mediterranean Basin

    Science.gov (United States)

    Sicard, Michaël.; Totems, Julien; Barragan, Rubén.; Dulac, François; Mallet, Marc; Comerón, Adolfo; Alados-Arboledas, Lucas; Augustin, Patrick; Chazette, Patrick; Léon, Jean-François; Olmo-Reyes, Francisco José; Renard, Jean-Baptiste; Rocadenbosch, Francesc

    2014-10-01

    In the framework of the project ChArMEx (the Chemistry-Aerosol Mediterranean Experiment, http://charmex.lsce.ipsl.fr/), the variability of aerosol optical, microphysical and radiative properties is examined in three regional background sites on a southwest - northeast (SW-NE) straight line in the middle of the western Mediterranean Basin (WMB). The three sites are on the northward transport pathway of African dust: - Ersa, Corsica Island, France (43.00ºN, 9.36ºW, 80 m a.s.l), - Palma de Mallorca, Mallorca Island, Spain (39.55ºN, 2.62ºE, 10 m a.s.l) and - Alborán, Alboran Island, Spain (35.94ºN, 3.04ºW, 15 m a.s.l). AERONET (AErosol RObotic NETwork) sun-photometer products are mainly used. A preliminary analysis shows that at Ersa and Palma sites the annual aerosol optical depth (AOD) has a similar trend with a peak around 0.2 in July. The winter/spring AOD is lower in Palma than in Ersa, while it is reverse in summer/autumn. The aerosol particle size distribution (and the coarse mode fraction) shows clearly the SW-NE gradient with a decreasing coarse mode peak (and a decreasing coarse mode fraction from 0.5 - 0.35 - 0.2 in July) along the axis Alborán - Palma de Mallorca - Ersa. In addition to the seasonal and annual variability analysis, the analysis of AERONET products is completed with a large variety of ground-based and sounding balloons remote sensing and in situ instruments during the Special Observation Period (SOP) of the ADRIMED campaign in June 2013. The second part of the presentation will focus on the comparison of the observations at Palma de Mallorca and Ersa of the same long-range transported airmasses. The observations include lidar vertical profiles, balloon borne OPC (Optical Particle Counter) and MSG/SEVIRI AOD, among others.

  17. SITE INDEX CURVES AND HYPSOMETRIC RELATIONSHIP FOR Eucalyptus grandis PLANTATIONS FOR THE CAMPOS GERAIS REGION, PARANA STATE

    Directory of Open Access Journals (Sweden)

    Fabiane Aparecida de Souza Retslaff

    2015-06-01

    Full Text Available The study aimed to fit mathematical models for the construction of Site Index curves and to estimate heights at different ages for Eucalyptus grandis in the Campos Gerais region, Parana State. The data used to fit the models came from permanent, temporary plots and pre-harvesting inventory, covering ages from 2.5 to 26.5 years. Several models were tested to represent the sites and the hypsometric relationship. The Site Index curves were constructed by the guide-curve method. For the Site Index, the Chapman-Richards model showed the best fit and precision statistics, generating 5 Site Index curves (range of 5 m with the Chapman-Richards model. The four hypsometric models tested showed satisfactory performance and similar statistics and the inclusion of the variables dominant height or site index did not substantially improve the goodness of fit statistics, but the residues were more homogeneous and closer to zero.

  18. Study on the binding sites of radiosensitivity associated transcription factor in the promoter region of Ier5 gene

    International Nuclear Information System (INIS)

    Cui Wei; Yin Lingling; Dong Lingyue

    2012-01-01

    Objective: To clarify the mechanism of immediate early response gene 5 (Ier5) transcription induced by radiation. Methods: Deletant construction, site-specific mutagenesis,electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP) were used to forecast the promoter region, binding sites and transcription factors of Ier5 gene in HeLa cells. Results: The promoter region of Ier5 gene might be in the region of Ier5 -8 deletant (-408 - -238 bp). The Ier5 gene had two transcription factors of GCF and NFI, and GCF had two binding sites located in the region of -388 - -382 bp and -274 - -270 bp of Ier5 promoter. The binding site of NFI was located in -362 - -357 bp of Ier5 promoter. GCF could inhibit the expression of Ier5 gene and this inhibition was diminished when the radiation dose increased. In contrast, NFI increased the expression of Ier5. Conclusions: The most possible region of Ier5 promoter is from -408 to -238 bp which has two binding sites for the radiosensitivity transcription factors of GCF and NFI that could negatively and positively regulate the expression of Ier5 respectively. (authors)

  19. An evaluation of the regional supply of biomass at three midwestern sites

    Energy Technology Data Exchange (ETDEWEB)

    English, B.C.; Dillivan, K.D.; Ojo, M.A.; Alexander, R.R. [Univ. of Tennessee, Knoxville, TN (United States); Graham, R.L. [Oak Ridge National Lab., TN (United States)

    1993-12-31

    Research has been conducted on both the agronomy and the conversion of biomass. However, few studies have been initiated that combine the knowledge of growing biomass with site specific resource availability information. An economic appraisal of how much biomass might be grown in a specific area for a given price has only just been initiated. This paper examines the economics of introducing biomass production to three midwest representative areas centered on the following counties, Orange County, Indiana; Olmsted County, Minnesota; and Cass County, North Dakota. Using a regional linear programming model, estimates of economic feasibility as well as environmental impacts are made. At a price of $53 per metric ton the biomass supplied to the plant gate is equal to 183,251 metric tons. At $62 per metric ton the biomass supply has increased to almost 1 million metric tons. The model predicts a maximum price of $88 per metric ton and at this price, 2,748,476 metric tons of biomass are produced.

  20. Ectoparasites of small ruminants in three selected agro-ecological sites of Tigray Region, Ethiopia.

    Science.gov (United States)

    Mulugeta, Y; Yacob, Hailu T; Ashenafi, Hagos

    2010-08-01

    A study on ectoparasites of small ruminants in three selected agro-ecological sites of Tigray Region, Ethiopia disclosed an overall prevalence of 55.5% and 58% in each examined 750 sheep and goats, respectively. In the sheep population, Melophagus ovinus (19.1%), tick infestations (16%), Damalinia ovis (15.3%), Linognathus africanus (11.5%), and Ctenocephalides felis (9%) were the major ectoparasites. The major ectoparasites identified in goats were tick infestations (29.7%), L. africanus (27.9%), Sarcoptes scabiei var. caprae (12.5%), C. felis (11.1%), and Demodex caprae (6.8%). In sheep, there was a statistically significant difference (P ovinus, L. africanus, and ticks between midland and highland. In goats, the risk of Sarcoptes scabiei var. caprae infestation in midland (odds ratio (OR) = 17.2, P < 0.001) and lowland (OR = 5.2, P < 0.001) was 17.2 times and 5.2 times, respectively, higher than the highland. Favorable climatic conditions, backward level of management, poor level of consciousness and awareness of farmers, and weak animal health extension services are believed to have contributed for widespread distribution and occurrences of ectoparasites. The growing threat of ectoparasites to small ruminant production and the tanning industry needs well-coordinated and urgent control intervention.

  1. Pesticides analysed in rainwater in Alsace region (Eastern France): Comparison between urban and rural sites

    Science.gov (United States)

    Scheyer, Anne; Morville, Stéphane; Mirabel, Philippe; Millet, Maurice

    Current-used pesticides commonly applied in Alsace region (Eastern France) on diverse crops (maize, vineyard, vegetables, etc.) were analysed, together with Lindane, in rainwater between January 2002 and June 2003 simultaneously on two sites situated in a typical rural (Erstein, France) and urban area (Strasbourg, France). Rainwater samples were collected on a weekly basis by using two automatic wet only collectors associated with an open collector for the measurement of rainwater height. Pesticides were analysed by GC-MSMS and extracted from rainwater by SPME. Two runs were performed. The first one was performed by using a PDMS (100 μm) fibre for pesticides where direct injection into GC is possible (alachlor, atrazine, azinphos-ethyl, azinphos-methyl, captan, chlorfenvinphos, dichlorvos, diflufenican, α- and β-endosulfan, iprodione, lindane, metolachlor, mevinphos, parathion-methyl, phosalone, phosmet, tebuconazole, triadimefon and trifluralin). The second run was performed by using PDMS/DVB fibre and this run concerns pesticides where a preliminary derivatisation step with pentafluorobenzylbromide (PFBBr) is required for very low volatiles (bromoxynil,2,4-MCPA, MCPP and 2,4-D) or thermo labiles (chlorotoluron, diuron and isoproturon) pesticides. Results showed that the more concentrated pesticides detected were those used as herbicides in large quantities in Alsace region for maize crops (alachlor, metolachlor and atrazine). Maximum concentrations for these herbicides have been measured during intensive applications periods on maize crops following by rapid decrease immediately after use. For Alachlor, most important peaks have been observed between 21 and 28 April 2003 (3327 ng L -1 at Erstein and 5590 ng L -1 at Strasbourg). This is also the case for Metolachlor where most important peak was observed during the same week. Concentrations of pesticides measured out of application periods were very low for many pesticides and some others where never detected

  2. Multi-site study of diffusion metric variability: effects of site, vendor, field strength, and echo time on regions-of-interest and histogram-bin analyses.

    Science.gov (United States)

    Helmer, K G; Chou, M-C; Preciado, R I; Gimi, B; Rollins, N K; Song, A; Turner, J; Mori, S

    2016-02-27

    It is now common for magnetic-resonance-imaging (MRI) based multi-site trials to include diffusion-weighted imaging (DWI) as part of the protocol. It is also common for these sites to possess MR scanners of different manufacturers, different software and hardware, and different software licenses. These differences mean that scanners may not be able to acquire data with the same number of gradient amplitude values and number of available gradient directions. Variability can also occur in achievable b-values and minimum echo times. The challenge of a multi-site study then, is to create a common protocol by understanding and then minimizing the effects of scanner variability and identifying reliable and accurate diffusion metrics. This study describes the effect of site, scanner vendor, field strength, and TE on two diffusion metrics: the first moment of the diffusion tensor field (mean diffusivity, MD), and the fractional anisotropy (FA) using two common analyses (region-of-interest and mean-bin value of whole brain histograms). The goal of the study was to identify sources of variability in diffusion-sensitized imaging and their influence on commonly reported metrics. The results demonstrate that the site, vendor, field strength, and echo time all contribute to variability in FA and MD, though to different extent. We conclude that characterization of the variability of DTI metrics due to site, vendor, field strength, and echo time is a worthwhile step in the construction of multi-center trials.

  3. Synonyms for some species of Mexican anoles (Squamata: Dactyloidae).

    Science.gov (United States)

    De Oca, Adrián Nieto Montes; Poe, Steven; Scarpetta, Simon; Gray, Levi; Lieb, Carl S

    2013-01-01

    We studied type material and freshly collected topotypical specimens to assess the taxonomic status of five names associated with species of Mexican Anolis. We find A. schmidti to be a junior synonym of A. nebulosus, A. breedlovei to be a junior synonym of A. cuprinus, A. polyrhachis to be a junior synonym of A. rubiginosus, A. simmonsi to be a junior synonym of A. nebuloides, and A. adleri to be a junior synonym of A. liogaster.

  4. AMCO Off-Site Air Monitoring Polygons, Oakland CA, 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — This feature class was developed to support the AMCO Chemical Superfund Site air monitoring process and depicts a single polygon layer, Off-Site Air Monitors,...

  5. A closure study of aerosol optical properties at a regional background mountainous site in Eastern China

    Energy Technology Data Exchange (ETDEWEB)

    Yuan, Liang [Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters, Nanjing University of Information Science & Technology, Nanjing 210044 (China); Key Laboratory for Aerosol–Cloud–Precipitation of China Meteorological Administration, School of Atmospheric Physics, Nanjing University of Information Science and Technology, Nanjing 210044 (China); Yin, Yan, E-mail: yinyan@nuist.edu.cn [Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters, Nanjing University of Information Science & Technology, Nanjing 210044 (China); Key Laboratory for Aerosol–Cloud–Precipitation of China Meteorological Administration, School of Atmospheric Physics, Nanjing University of Information Science and Technology, Nanjing 210044 (China); Xiao, Hui [Key Laboratory for Aerosol–Cloud–Precipitation of China Meteorological Administration, School of Atmospheric Physics, Nanjing University of Information Science and Technology, Nanjing 210044 (China); Yu, Xingna [Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters, Nanjing University of Information Science & Technology, Nanjing 210044 (China); Key Laboratory for Aerosol–Cloud–Precipitation of China Meteorological Administration, School of Atmospheric Physics, Nanjing University of Information Science and Technology, Nanjing 210044 (China); Hao, Jian; Chen, Kui [Key Laboratory for Aerosol–Cloud–Precipitation of China Meteorological Administration, School of Atmospheric Physics, Nanjing University of Information Science and Technology, Nanjing 210044 (China); and others

    2016-04-15

    There is a large uncertainty in evaluating the radiative forcing from aerosol–radiation and aerosol–cloud interactions due to the limited knowledge on aerosol properties. In-situ measurements of aerosol physical and chemical properties were carried out in 2012 at Mt. Huang (the Yellow Mountain), a continental background mountainous site in eastern China. An aerosol optical closure study was performed to verify the model outputs by using the measured aerosol optical properties, in which a spherical Mie model with assumptions of external and core–shell mixtures on the basis of a two-component optical aerosol model and high size-segregated element carbon (EC) ratio was applied. Although the spherical Mie model would underestimate the real scattering with increasing particle diameters, excellent agreement between the calculated and measured values was achieved with correlation coefficients above 0.98. Sensitivity experiments showed that the EC ratio had a negligible effect on the calculated scattering coefficient, but largely influenced the calculated absorption coefficient. The high size-segregated EC ratio averaged over the study period in the closure was enough to reconstruct the aerosol absorption coefficient in the Mie model, indicating EC size resolution was more important than time resolution in retrieving the absorption coefficient in the model. The uncertainties of calculated scattering and absorption coefficients due to the uncertainties of measurements and model assumptions yielded by a Monte Carlo simulation were ± 6% and ± 14% for external mixture and ± 9% and ± 31% for core–shell mixture, respectively. This study provided an insight into the inherent relationship between aerosol optical properties and physicochemical characteristics in eastern China, which could supplement the database of aerosol optical properties for background sites in eastern China and provide a method for regions with similar climate. - Highlights: • A spherical Mie

  6. A closure study of aerosol optical properties at a regional background mountainous site in Eastern China

    International Nuclear Information System (INIS)

    Yuan, Liang; Yin, Yan; Xiao, Hui; Yu, Xingna; Hao, Jian; Chen, Kui

    2016-01-01

    There is a large uncertainty in evaluating the radiative forcing from aerosol–radiation and aerosol–cloud interactions due to the limited knowledge on aerosol properties. In-situ measurements of aerosol physical and chemical properties were carried out in 2012 at Mt. Huang (the Yellow Mountain), a continental background mountainous site in eastern China. An aerosol optical closure study was performed to verify the model outputs by using the measured aerosol optical properties, in which a spherical Mie model with assumptions of external and core–shell mixtures on the basis of a two-component optical aerosol model and high size-segregated element carbon (EC) ratio was applied. Although the spherical Mie model would underestimate the real scattering with increasing particle diameters, excellent agreement between the calculated and measured values was achieved with correlation coefficients above 0.98. Sensitivity experiments showed that the EC ratio had a negligible effect on the calculated scattering coefficient, but largely influenced the calculated absorption coefficient. The high size-segregated EC ratio averaged over the study period in the closure was enough to reconstruct the aerosol absorption coefficient in the Mie model, indicating EC size resolution was more important than time resolution in retrieving the absorption coefficient in the model. The uncertainties of calculated scattering and absorption coefficients due to the uncertainties of measurements and model assumptions yielded by a Monte Carlo simulation were ± 6% and ± 14% for external mixture and ± 9% and ± 31% for core–shell mixture, respectively. This study provided an insight into the inherent relationship between aerosol optical properties and physicochemical characteristics in eastern China, which could supplement the database of aerosol optical properties for background sites in eastern China and provide a method for regions with similar climate. - Highlights: • A spherical Mie

  7. Management of split skin graft donor site in the West African sub region: survey of plastic surgeons' practice.

    Science.gov (United States)

    Olawoye, O A; Ademola, S A; Iyun, A O; Michael, A I; Oluwatosin, O M

    2017-06-30

    Split skin graft (SSG) is one of the most commonly performed operations on any Plastic Surgery service. Rate of donor site healing is affected by various factors including the type of dressing applied. The aim of this study was to survey the practice of plastic surgeons in the sub region with respect to management of SSG donor site and see how it conforms to international standards. Structured questionnaires on various aspects of the harvest and management of SSG donor sites were administered to plastic surgeons during the 53rd annual conference of the West African College of Surgeons (WACS) at Lome, Togo in March 2013. The data were analyzed using descriptive statistics. There were 47 respondents out of 55 plastic surgeons from four West African countries, which represented 85.4% of registered participants at the plastic surgery section of the conference. All the respondents performed SSG regularly, and the thigh was the most commonly used donor site. Different types of paraffin gauze remained the most commonly used primary donor site dressing. Only 17% of the respondents apply a topical local anaesthetic agent on the donor site. The choice of SSG donor site dressing in the sub region was driven mainly by availability. Concerted efforts must be made to access newer wound care products for optimum management of this commonly performed operation.

  8. Application of PIXE to the characterization of vitreous dacites from archaeolgical sites in the Atacama region in northern Chile

    Energy Technology Data Exchange (ETDEWEB)

    Morales, J.R.; Cancino, S. [Departamento de Fisica, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Nunoa, Santiago 1 (Chile); Miranda, P. [Departamento de Fisica, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Nunoa, Santiago 1 (Chile)], E-mail: pjmirand@gmail.com; Dinator, M.I. [Departamento de Fisica, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Nunoa, Santiago 1 (Chile); Seelenfreund, A. [Universidad Academia de Humanismo Cristiano, Condell 343, Providencia, Santiago (Chile)

    2007-11-15

    Geochemical characterization studies using PIXE were carried out on 21 vitreous dacite artifacts from early formative archaeological sites in the Atacama region, in northern Chile, and on 13 samples taken from two potential volcanic sources located within the region. Performing statistical analyses it was possible to obtain elemental concentration patterns for the archaeological samples of this material and match some of these artifacts with the geological source samples.

  9. Health of children living in Panfilov distract of Almaty region after Chernobyl accident and nuclear explosions at Lobnor test site

    International Nuclear Information System (INIS)

    Mit, A.A.; Chasnikov, I.Ya.; Chastnicova, S.S.; Mukhametzhanov, M.M.; Zhantagulova, T.K.

    1999-01-01

    It is known that Panfilov district of Almaty region was affected with radiation contamination during nuclear explosions at Lobnor test site and after Chernobyl accident, which impaired the health of its population [1]. In addition, the children's mortality rate was turned out to be the highest one among other districts of the region. This report presents some other information related to an increase of children's sickness rate in Panfilov district

  10. Assessing Climate Vulnerabilities of Food Distribution Center Sites in Greater Boston and Their Regional Implications: Climate Adaptation Planning in Practice

    Science.gov (United States)

    Teferra, A.; Watson, C.; Douglas, E. M.

    2016-12-01

    The Metro Boston region, an area whose civic leaders have been at the forefront of climate resilience initiatives in recent years, is finalizing a flood vulnerability assessment of food distribution center sites located north of Boston, with the support of the University of Massachusetts Boston and the American Geophysical Union's Thriving Earth Exchange program. The community-scientist collaboration emerged because of the need for more local analyses of the area to inform climate resiliency policy and planning actions for the region. A significant amount of the metro region's food supply passes through two major distribution centers in the cities of Everett and Chelsea, just north of the Mystic River. The Metropolitan Area Planning Council (MAPC), on behalf of the Metro Boston Climate Preparedness Taskforce, is working with Chris Watson and Ellen Douglas of UMass Boston to build on existing analyses of the region's food system and climate vulnerabilities and to develop a report identifying flood risk exposure to the sites. The analysis brings in dynamic modeling techniques that incorporate storm surge and sea level rise projections under different climate scenarios, and aims to align methodologies with those of other regional analyses, such as Climate Ready Boston and the City of Cambridge's Vulnerability Assessment. The study is helping to inform MAPC's and the Metro Boston Climate Preparedness Taskforce's understanding of this critical food distribution infrastructure, illustrate the larger regional implications of climate impacts on food distribution in the Greater Boston area, and guide the development of site-specific strategies for addressing identified vulnerabilities.

  11. Distinct regions of loss of heterozygosity on 22q in different sites of head and neck squamous cell carcinomas

    DEFF Research Database (Denmark)

    dos Reis, Patricia Pintor; Poli-Frederico, Regina Célia; dos Santos, Rodrigo Mattos

    2002-01-01

    laryngeal, and 31 pharyngeal carcinomas. RESULTS: Two separate regions of LOH were identified in the laryngeal (22q11.2-12.1) and oral cavity (22q13.1-13.31) tumors. When the different anatomical sites were compared, a statistically significant difference was found between the presence of LOH at D22S421 (p......pharyngeal tumors and genes...

  12. Human β-globin locus control region: Analysis of the 5' DNase I hypersensitive site HS 2 in transgenic mice

    International Nuclear Information System (INIS)

    Caterina, J.J.; Ryan, T.M.; Pawlik, K.M.; Townes, T.M.; Brinster, R.L.; Behringer, R.R.; Palmiter, R.D.

    1991-01-01

    The human β-globin locus control region (LCR) is essential for high-level expression of human var-epsilon-, γ-, and β-globin genes. Developmentally stable DNase I hypersensitive sites (designated HS) mark sequences within this region that are important for LCR activity. A 1.9-kilobase (kb) fragment containing the 5' HS 2 site enhances human β-globin gene expression 100-fold in transgenic mice and also confers position-independent expression. To further define important sequences within this region, deletion mutations of the 1.9-kb fragment were introduced upstream of the human β-globin gene, and the constructs were tested for activity in transgenic mice. Although enhancer activity was gradually lost with deletion of both 5' and 3' sequences, a 373-base-pair (BP) fragment retained the ability to confer relative position-independent expression. Three prominent DNase I footprints were observed in this region with extracts from the human erythroleukemia cell line K-562, one of which contained duplicated binding sites for transcription factor AP-1 (activator protein 1). When the 1.9-kb fragment containing an 19-bp deletion of the AP-1 binding sites was tested in transgenic mice, enhancer activity decreased 20-fold but position-independent expression was retained

  13. Radiometric survey in the sites of Regional office in Fortaleza, research gallery and camp in Itataia, CE (Brazil)

    International Nuclear Information System (INIS)

    1982-02-01

    The radiometric survey in Regional officer sites in Fortaleza, Brazil, research gallery and camp in Itataia is presented. The measurings to be done, the instrumentation used and results obtained are described as well as the conclusions and recommendations. (C.M.) [pt

  14. Regional groundwater chemical characteristics of Aqishan pre-selected site for high level radioactive waste repository and its hydrogeological significance

    International Nuclear Information System (INIS)

    Guo Yonghai; Dong Jiannan; Liu Shufen; Zhou Zhichao

    2014-01-01

    Aqishan area located in Xinjiang Uygur Automonous Region is one of the main preselected site of disposal repository for high-level radioactive waste (HLW) in our country. Groundwater chemical feature is one of the most important consideration factors in the siting and site evaluation for high-level radioactive waste repository, From 2012 to 2013, the regional field hydrogeochemical investigation was carried out in study area and more than 30 groundwater samples were collected. According to the measurement data, the groundwater chemical features for different subareas are discussed in the paper. Furthermore, the location of discharge area of groundwater in Aqishan area was estimated according to the chemical features of different subareas. (authors)

  15. Site scale wetness classification of tundra regions with C-band SAR satellite data

    DEFF Research Database (Denmark)

    Widhalm, Barbara; Bartsch, Annett; Siewert, Matthias Benjamin

    2016-01-01

    of this approach at site scale using ENVISAT ASAR WS data (∼120 m resolution). These higher resolution ASAR WS maps have been produced for study sites representing different settings throughout the Arctic and compared to high resolution land cover maps and field survey data. It can be shown that a medium...

  16. The potential monetary benefits of reclaiming hazardous waste sites in the Campania region: an economic evaluation.

    Science.gov (United States)

    Guerriero, Carla; Cairns, John

    2009-06-24

    Evaluating the economic benefit of reducing negative health outcomes resulting from waste management is of pivotal importance for designing an effective waste policy that takes into account the health consequences for the populations exposed to environmental hazards. Despite the high level of Italian and international media interest in the problem of hazardous waste in Campania little has been done to reclaim the land and the waterways contaminated by hazardous waste. This study aims to reduce the uncertainty about health damage due to waste exposure by providing for the first time a monetary valuation of health benefits arising from the reclamation of hazardous waste dumps in Campania. First the criteria by which the landfills in the Campania region, in particular in the two provinces of Naples and Caserta, have been classified are described. Then, the annual cases of premature death and fatal cases of cancers attributable to waste exposure are quantified. Finally, the present value of the health benefits from the reclamation of polluted land is estimated for each of the health outcomes (premature mortality, fatal cancer and premature mortality adjusted for the cancer premium). Due to the uncertainty about the time frame of the benefits arising from reclamation, the latency of the effects of toxic waste on human health and the lack of context specific estimates of the Value of Preventing a Fatality (VPF), extensive sensitivity analyses are performed. There are estimated to be 848 cases of premature mortality and 403 cases of fatal cancer per year as a consequence of exposure to toxic waste. The present value of the benefit of reducing the number of waste associated deaths after adjusting for a cancer premium is euro11.6 billion. This value ranges from euro5.4 to euro20.0 billion assuming a time frame for benefits of 10 and 50 years respectively. This study suggests that there is a strong economic argument for both reclaiming the land contaminated with hazardous

  17. The potential monetary benefits of reclaiming hazardous waste sites in the Campania region: an economic evaluation

    Directory of Open Access Journals (Sweden)

    Cairns John

    2009-06-01

    Full Text Available Abstract Background Evaluating the economic benefit of reducing negative health outcomes resulting from waste management is of pivotal importance for designing an effective waste policy that takes into account the health consequences for the populations exposed to environmental hazards. Despite the high level of Italian and international media interest in the problem of hazardous waste in Campania little has been done to reclaim the land and the waterways contaminated by hazardous waste. Objective This study aims to reduce the uncertainty about health damage due to waste exposure by providing for the first time a monetary valuation of health benefits arising from the reclamation of hazardous waste dumps in Campania. Methods First the criteria by which the landfills in the Campania region, in particular in the two provinces of Naples and Caserta, have been classified are described. Then, the annual cases of premature death and fatal cases of cancers attributable to waste exposure are quantified. Finally, the present value of the health benefits from the reclamation of polluted land is estimated for each of the health outcomes (premature mortality, fatal cancer and premature mortality adjusted for the cancer premium. Due to the uncertainty about the time frame of the benefits arising from reclamation, the latency of the effects of toxic waste on human health and the lack of context specific estimates of the Value of Preventing a Fatality (VPF, extensive sensitivity analyses are performed. Results There are estimated to be 848 cases of premature mortality and 403 cases of fatal cancer per year as a consequence of exposure to toxic waste. The present value of the benefit of reducing the number of waste associated deaths after adjusting for a cancer premium is €11.6 billion. This value ranges from €5.4 to €20.0 billion assuming a time frame for benefits of 10 and 50 years respectively. Conclusion This study suggests that there is a strong

  18. Low- and intermediate level radioactive waste from Risoe, Denmark. Site studies. Report no. 1. Oestermarie - Paradisbakkerne, Bornholm Region

    International Nuclear Information System (INIS)

    Gravesen, P.; Nilsson, B.; Binderup, M.; Larsen, Tine; Schack Pedersen, S.A.

    2012-01-01

    The low- and intermediate-level radioactive wastes from Risoe (the nuclear reactor buildings, different types of material from the research periods and waste from hospitals and research institutes) have to be stored in a final disposal in Denmark for at least 300 years. In 2011, the results of the first analyses of 20 potential areas for siting a waste disposal were published. Of these potential areas, 6 specific sites were selected for further detailed studies. The site studies include information about geology, land use, nature preservation, archaeology, drinking water supply etc. The 5 municipalities with the 6 selected sites have been visited to obtain as much information about local conditions as possible. The present report describes the results for the area at Oestermarie-Paradisbakkerne in the region of Bornholm, East Denmark. (LN)

  19. Siting regions for deep geological repositories. Nagra’s proposals for stage 3

    International Nuclear Information System (INIS)

    2014-01-01

    This brochure published by the Swiss National Cooperative for the Disposal of Radioactive Waste (NAGRA) discusses the selection of sites for deep geological repositories for nuclear wastes in Switzerland. The procedure proposed for the selection process is explained. The four sites for possible repositories of high-level radioactive waste as well as for low and intermediate-level wastes are described and rated with respect to the various safety factors involved. The reasons for the long-term safety measures proposed and the geological barriers involved are discussed. The four proposals for depository sites are looked at in more detail. The paper is well illustrated with several diagrams and tables

  20. Incorporating Climate and Regional Setting into Realistic-Efficacious End States for Contaminated Sites - 15386

    Energy Technology Data Exchange (ETDEWEB)

    Looney, Brian [Environmental Stewardship Directorate; Denham, Miles [Environmental Stewardship Directorate; Eddy-Dilek, Carol [Environmental Stewardship Directorate; Dam, William [U.S. Department of Energy, Legacy Management; Kautsky, Mark [U.S. Department of Energy, Legacy Management

    2015-03-01

    Hydrological and geochemical controls in arid environments (many mining and milling sites) work together to limit the size of groundwater plumes and can extend plume flushing times Incorporation of these concepts may support formulation of alternative end states At several DOE-LM sites, such as Mound, land and facilities have been transferred to the local community for transitioning to beneficial reuse and development. Some of the DOE-LM UMTRCA sites appear to be good candidate for brownfield reuse and serve as a resource for future employment and ongoing benefit to stakeholders and Native American Nations.

  1. Geographic Response Plan (GRP) Sensitive Site Points (Editable), Guam, 2016, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — This is an editable point feature data set with points over Apra Harbor in Guam. These points represent sensitive sites such as access points for public use and...

  2. AMCO Off-Site Air Monitoring Map Service, Oakland CA, 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — This map service contains a single layer: Off-Site Air Monitors. The layer draws at all scales. Full FGDC metadata for the layer may be found by clicking the layer...

  3. AMCO On-Site Air Monitoring Map Service, Oakland CA, Live 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — This map service contains the following layers: All On-Site Air Monitors, TCE, PCE, and Vinyl Chloride. The layers draws at all scales. Full FGDC metadata for the...

  4. Muscular Arrangement and Muscle Attachment Sites in the Cervical Region of the American Barn Owl (Tyto furcata pratincola.

    Directory of Open Access Journals (Sweden)

    Mark L L M Boumans

    Full Text Available Owls have the largest head rotation capability amongst vertebrates. Anatomical knowledge of the cervical region is needed to understand the mechanics of these extreme head movements. While data on the morphology of the cervical vertebrae of the barn owl have been provided, this study is aimed to provide an extensive description of the muscle arrangement and the attachment sites of the muscles on the owl's head-neck region. The major cervical muscles were identified by gross dissection of cadavers of the American barn owl (Tyto furcata pratincola, and their origin, courses, and insertion were traced. In the head-neck region nine superficial larger cervical muscles of the craniocervical, dorsal and ventral subsystems were selected for analysis, and the muscle attachment sites were illustrated in digital models of the skull and cervical vertebrae of the same species as well as visualised in a two-dimensional sketch. In addition, fibre orientation and lengths of the muscles and the nature (fleshy or tendinous of the attachment sites were determined. Myological data from this study were combined with osteological data of the same species. This improved the anatomical description of the cervical region of this species. The myological description provided in this study is to our best knowledge the most detailed documentation of the cervical muscles in a strigiform species presented so far. Our results show useful information for researchers in the field of functional anatomy, biomechanical modelling and for evolutionary and comparative studies.

  5. Trace Metal Content of Sediments Close to Mine Sites in the Andean Region

    Directory of Open Access Journals (Sweden)

    Cristina Yacoub

    2012-01-01

    Full Text Available This study is a preliminary examination of heavy metal pollution in sediments close to two mine sites in the upper part of the Jequetepeque River Basin, Peru. Sediment concentrations of Al, As, Cd, Cu, Cr, Fe, Hg, Ni, Pb, Sb, Sn, and Zn were analyzed. A comparative study of the trace metal content of sediments shows that the highest concentrations are found at the closest points to the mine sites in both cases. The sediment quality analysis was performed using the threshold effect level of the Canadian guidelines (TEL. The sediment samples analyzed show that potential ecological risk is caused frequently at both sites by As, Cd, Cu, Hg, Pb, and Zn. The long-term influence of sediment metals in the environment is also assessed by sequential extraction scheme analysis (SES. The availability of metals in sediments is assessed, and it is considered a significant threat to the environment for As, Cd, and Sb close to one mine site and Cr and Hg close to the other mine site. Statistical analysis of sediment samples provides a characterization of both subbasins, showing low concentrations of a specific set of metals and identifies the main characteristics of the different pollution sources. A tentative relationship between pollution sources and possible ecological risk is established.

  6. Nuclear Energy Center: upper St. Lawrence region. Part I. Siting. Part II. Fort Drum surrogate site, description and impact assessment. Part III. Dispersed sites impact assessment and comparison with the NEC

    Energy Technology Data Exchange (ETDEWEB)

    Merry, P.A.; Luner, C.; Hong, S.W.; Canham, H.O.; Boggs, J.F.; McCool, T.P.

    1976-12-01

    This report is one of many supporting documents used by the Nuclear Regulatory commission in the preparation of the Nuclear Energy Center Site Survey (NECSS) mandated by Congress. While the overall study focuses on the feasibility and practicability of nuclear energy centers (NECs), this report is directed towards choosing a suitable surrogate site in the upper St. Lawrence region of New York State, assessing the probable impacts associated with construction and operation of the NEC, and comparing these impacts with those associated with small dispersed nuclear power stations. The upper St. Lawrence region is surveyed to identify a specific site that might be suitable for a surrogate NEC. Several assumptions about the basic design of an NEC are delineated, and a general overview of the characteristics of the region is given. The Fort Drum Military Reservation is chosen as a suitable surrogate site. Fort Drum and the surrounding area are described in terms of land use and population patterns, terrestrial and aquatic ecology, water use and quality, meteorology, institutional framework, and socioeconomic structure. The impacts associated with NEC development are assessed. Then the impacts associated with smaller dispersed nuclear power stations located throughout New York State are assessed and compared with the impacts associated with the NEC. Finally, the impacts due to development of the transmission line networks associated with the NEC and with the dispersed power stations are assessed and compared.

  7. Identification of suitable sites for rainwater harvesting structures in arid and semi-arid regions: A review

    Directory of Open Access Journals (Sweden)

    Ammar Adham

    2016-06-01

    Full Text Available Harvested rainwater is an alternative source of water in arid and semi-arid regions (ASARs around the world. Many researchers have developed and applied various methodologies and criteria to identify suitable sites and techniques for rainwater harvesting (RWH. Determining the best method or guidelines for site selection, however, is difficult. The main objective of this study was to define a general method for selecting suitable RWH sites in ASARs by assembling an inventory of the main methods and criteria developed during the last three decades. We categorised and compared four main methodologies of site selection from 48 studies published in scientific journals, reports of international organisations, or sources of information obtained from practitioners. We then identified three main sets of criteria for selecting RWH locations and the main characteristics of the most common RWH techniques used in ASARs. The methods were diverse, ranging from those based only on biophysical criteria to more integrated approaches including socio-economic criteria, especially after 2000. The most important criteria for the selection of suitable sites for RWH were slope, land use/cover, soil type, rainfall, distance to settlements/streams, and cost. The success rate of RWH projects tended to increase when these criteria were considered, but an objective evaluation of these selection methods is still lacking. Most studies now select RHW sites using geographic information systems in combination with hydrological models and multi-criteria analysis.

  8. Superfund Record of Decision (EPA Region 8): Denver Radium Site Streets, Colorado, March 1986. Final report

    International Nuclear Information System (INIS)

    1986-01-01

    Denver Radium Site Streets is located in Denver, Colorado. The operable unit is comprised of eight street segments in the Cheesman Park area and one segment in the upper downtown area. The nine contaminated street segments are owned by the City and County of Denver and extend approximately 4.5 miles through largely residential areas. The Denver Radium Site Streets contain a 4- to 6-inch layer of radium-contaminated asphalt. The contaminated layer is underlain by compacted gravel road base and is usually overlain by 4 to 12 inches of uncontaminated asphalt pavement. There is an estimated 38,500 cubic yards of contaminated material covering approximately 832,000 square feet. The selected remedial action for the site includes: leaving the contaminated material in place; improving institutional controls; and removing any contaminated material excavated during routine maintenance, repair, or construction activities in the affected streets to a facility approved for storage or disposal of contaminated material

  9. EPA Region 2 Draft NPL Site Contamination Area Boundaries as of February 2007 GIS Layer [EPA.R2_NPL_CONTAMBND

    Data.gov (United States)

    U.S. Environmental Protection Agency — This layer represents the contamination boundaries of all NPL sites located in EPA Region Region 2 (New York, New Jersey, Puerto Rico and the U.S. Virgin Islands)....

  10. Characteristics of forming of synonymic rows within lexical phraseological field

    Directory of Open Access Journals (Sweden)

    Мария Валерьевна Волнакова

    2011-03-01

    Full Text Available The article deals with the characteristics of forming of phraseological synonymic rows with a lexical identifier as a dominant of a row. Revealed synonymic rows mirror the deepness of systematic language relationships between lexis and phraseology.

  11. Study of Site Effect at Seismic Station Located in Undermined Area of Karviná Region (Czech Republic)

    Czech Academy of Sciences Publication Activity Database

    Lednická, Markéta; Kaláb, Zdeněk

    2016-01-01

    Roč. 64, č. 5 (2016), s. 1715-1730 ISSN 1895-7455 R&D Projects: GA ČR GP13-07027P Institutional support: RVO:68145535 Keywords : Karviná region * site effect * SSR * HVSR * mining induced seismicity Subject RIV: JM - Building Engineering Impact factor: 0.968, year: 2016 http://agp.igf.edu.pl/files/64/5/Lednicka-Kalab.pdf

  12. The in vitro transcription of a rainbow trout (Salmo gairdnerii) protamine gene. II. Controlled mutation of the cap site region.

    Science.gov (United States)

    Jankowski, J M; Dixon, G H

    1985-02-01

    A series of plasmids containing new fusion genes in which the trout protamine gene is placed under the control of the complete herpes virus (HSV-1) tk promoter Pvu II-Bgl II fragment (pM8), or a shortened thymidine kinase (tk) promoter in which the region between the TATA box and the cap site is altered by using the Pvu II-Mlu I fragment (pM7), have been constructed. An additional recombinant plasmid was constructed in which the Bgl II-Ava II fragment of the protamine gene containing the entire protamine promoter but missing the protamine coding region was cloned into pBR322 between the Xho II 1666 and Hind III sites (pP5). For in vitro transcription, a HeLa cell lysate system was prepared and the RNA transcription products, after glyoxalation, were electrophoretically analyzed on 5% polyacrylamide gels. In constructing pM8 the DNA sequence between the tk promoter and the cap site was present while in pM7 it was deleted. Similar multiple transcripts were seen in both cases, indicating that the region between the promoter and the cap site has no effect upon transcription in vitro. The multiple transcripts appear to be due to the presence of a cryptic promoter in the complementary strand of the protamine gene. The activity of this cryptic promoter has been confirmed by comparison of the transcription of plasmid pP5, in which the protamine mRNA coding region has been deleted, with a previously described plasmid, pJBRP (Jankowski JM and Dixon GH (1984) Can. J. Biochem. Cell. Biol. 62, 291-300), containing the intact protamine gene.

  13. Geomorphological assessment of sites and impoundments for the long term containment of uranium mill tailings in the Alligator Rivers Region

    International Nuclear Information System (INIS)

    East, T.J.

    1986-01-01

    This paper presents a program of current and future research into those geomorphological processes likely to affect the long term containment of uranium mill tailings in the Alligator Rivers Region of the Northern Territory. Research is directed at three main areas: identification of geomorphic hazards at proposed impoundment sites; determination of erosion rates on impoundment slopes; and prediction of patterns of fluvial dispersal of released tailings. Each necessitates consideration of present and future geomorphic processes

  14. New public commons and network of nuclear site regions for the post-Fukushima accident re-vitalization

    International Nuclear Information System (INIS)

    Sawada, Tetsuo

    2011-01-01

    Due to the Fukushima Daiichi NPP accidents on March 11 2011, the landscape of the community of nuclear energy R and D and usage has been changing in various aspects here in Japan. With such recognition, the networking of nuclear site regions as well as consumer cities is proposed for obtaining novel-sense societal confidence, on the basis of on-going practice of atom-sports such as international MaxiMarathon and domestoic Tour de Atom. (author)

  15. Generation of Natural Runoff Monthly Series at Ungauged Sites Using a Regional Regressive Model

    Directory of Open Access Journals (Sweden)

    Dario Pumo

    2016-05-01

    Full Text Available Many hydrologic applications require reliable estimates of runoff in river basins to face the widespread lack of data, both in time and in space. A regional method for the reconstruction of monthly runoff series is here developed and applied to Sicily (Italy. A simple modeling structure is adopted, consisting of a regression-based rainfall–runoff model with four model parameters, calibrated through a two-step procedure. Monthly runoff estimates are based on precipitation, temperature, and exploiting the autocorrelation with runoff at the previous month. Model parameters are assessed by specific regional equations as a function of easily measurable physical and climate basin descriptors. The first calibration step is aimed at the identification of a set of parameters optimizing model performances at the level of single basin. Such “optimal” sets are used at the second step, part of a regional regression analysis, to establish the regional equations for model parameters assessment as a function of basin attributes. All the gauged watersheds across the region have been analyzed, selecting 53 basins for model calibration and using the other six basins exclusively for validation. Performances, quantitatively evaluated by different statistical indexes, demonstrate relevant model ability in reproducing the observed hydrological time-series at both the monthly and coarser time resolutions. The methodology, which is easily transferable to other arid and semi-arid areas, provides a reliable tool for filling/reconstructing runoff time series at any gauged or ungauged basin of a region.

  16. Conceptual design report for regional low-level waste interim storage site

    International Nuclear Information System (INIS)

    Bird, M.V.; Thompson, J.D.

    1981-08-01

    An interim storage site design concept was developed for receiving 100,000 ft 3 low-level waste per year, in the form of solidified wastes in 55-gallon drums with a dose rate of < 200 mrem per hour at contact

  17. New public commons and network of nuclear site regions for the post-Fukushima accident re-vitalization

    International Nuclear Information System (INIS)

    Sawada, Tetsuo

    2012-01-01

    Due to the Fukushima NPP accidents on 11 March 2011, we have deadly lost the regional ties among local people, electricity consumers, and people involved in the nuclear research, development and businesses. Now we need the method to reconstruct the ties and further the activation of locals in accordance to the concept of 'New Public Commons'. And it is the most important key to recover the people's confidence for the nuclear business and promote the new siting and replacement of nuclear power stations. More than forty years have past since the earliest stage of invitation of nuclear power stations to regional areas in Japan. For this period, the efforts for the development of regional industries and the improvement of regional life obtained a level of results. However, now a new turn is required in the regional development, as the perception of wealthy has been gradually changed. The primary objective of this study is to make a network among regional areas where nuclear power stations and related facilities are located. It should further the understanding for nuclear energy, stimulate the 'emergence' through the cooperative works among regional areas. As a result, such efforts will enhance the Social Responsibility of conducts related to the nuclear energy. i.e., Nuclear SR (NSR). The basic frame of the NSR should be re-estimated in the reflection of 3.11 Fukushima NPP accidents. (author)

  18. Trigeminal Neuralgia: Evaluation of the Relationship Between the Region of Neuralgic Manifestation and the Site of Neurovascular Compression Under Endoscopy.

    Science.gov (United States)

    Zhang, Wenhao; Chen, Minjie; Zhang, Weijie; Chai, Ying

    2015-07-01

    This study aimed to evaluate the relationship among the pain region, branches of trigeminal nerve, and the neurovascular compression (NVC) location. A total of 123 consecutive patients with trigeminal neuralgia (TN) underwent endoscope-assisted microvascular decompression according to positive preoperative tomographic angiography. V2 alone was in 51 cases and V3 alone was in 64 cases. The location of NVC was classified into cranial, caudal, medial, or lateral sites. Some patients with multiple regions were recorded as medial + cranial, lateral + cranial, medial + caudal, and lateral + caudal. Twenty-eight (71.8%) of 39 patients with TN (V2) had their NVC at the medial site of the nerve. Twenty-seven (64.3%) of 42 patients with TN (V3) had their NVC at the lateral site of the nerve. There was a statistically significant difference (P = 0.0011  0.01). Evaluation of the relationship between the pain region and the NVC location by endoscopic images during microvascular decompression is more accurate. The second branch is mostly distributed in the medial area, and third branch is mainly distributed in the lateral area.

  19. A GIS analysis of suitability for construction aggregate recycling sites using regional transportation network and population density features

    Science.gov (United States)

    Robinson, G.R.; Kapo, K.E.

    2004-01-01

    Aggregate is used in road and building construction to provide bulk, strength, support, and wear resistance. Reclaimed asphalt pavement (RAP) and reclaimed Portland cement concrete (RPCC) are abundant and available sources of recycled aggregate. In this paper, current aggregate production operations in Virginia, Maryland, and the District of Columbia are used to develop spatial association models for the recycled aggregate industry with regional transportation network and population density features. The cost of construction aggregate to the end user is strongly influenced by the cost of transporting processed aggregate from the production site to the construction site. More than 60% of operations recycling aggregate in the mid-Atlantic study area are located within 4.8 km (3 miles) of an interstate highway. Transportation corridors provide both sites of likely road construction where aggregate is used and an efficient means to move both materials and on-site processing equipment back and forth from various work sites to the recycling operations. Urban and developing areas provide a high market demand for aggregate and a ready source of construction debris that may be processed into recycled aggregate. Most aggregate recycling operators in the study area are sited in counties with population densities exceeding 77 people/km2 (200 people/mile 2). No aggregate recycling operations are sited in counties with less than 19 people/km2 (50 people/mile2), reflecting the lack of sufficient long-term sources of construction debris to be used as an aggregate source, as well as the lack of a sufficient market demand for aggregate in most rural areas to locate a recycling operation there or justify the required investment in the equipment to process and produce recycled aggregate. Weights of evidence analyses (WofE), measuring correlation on an area-normalized basis, and weighted logistic regression (WLR), are used to model the distribution of RAP and RPCC operations relative

  20. Regional flow and solute transport modeling for site suitability. Part I

    International Nuclear Information System (INIS)

    Rowe, J.; Miller, I.

    1979-12-01

    The nature of regional flow systems in large sedimentary basins will largely determine the effectiveness of regional flow as a barrier to radionuclide escape from deep geologic repositories. The purpose of the work reported herein and the proposed future work is to develop a methodology for evaluating regional flow barriers by using numerical models. The Williston Basin was chosen as an archetype case for the regional modeling study. However, due to the simplified nature of the study, the results are not meant to represent the behavior of a repository actually placed within the Williston Basin. The major components of this Phase I study are: (1) assembly and reduction of available data; (2) formulation of a simplified geohydrologic model; (3) computer simulation of fluid flow; and (4) computer simulation of solute transport. As of this report, the first two items are essentially completed. Computer simulation of fluid flow will require some revision and further study, which will be done in the second phase of this study. Computer simulation of solute transport has been considered only on a very preliminary basis. Important conclusions of this Phase I study are as follows. Assembly and reduction of data require an extensive work effort. Generally, the parameters describing fluid flow are poorly known on a regional basis and those describing solute transport are unknown

  1. Regional flow and solute transport modeling for site suitability. Part I

    Energy Technology Data Exchange (ETDEWEB)

    Rowe, J.; Miller, I.

    1979-12-01

    The nature of regional flow systems in large sedimentary basins will largely determine the effectiveness of regional flow as a barrier to radionuclide escape from deep geologic repositories. The purpose of the work reported herein and the proposed future work is to develop a methodology for evaluating regional flow barriers by using numerical models. The Williston Basin was chosen as an archetype case for the regional modeling study. However, due to the simplified nature of the study, the results are not meant to represent the behavior of a repository actually placed within the Williston Basin. The major components of this Phase I study are: (1) assembly and reduction of available data; (2) formulation of a simplified geohydrologic model; (3) computer simulation of fluid flow; and (4) computer simulation of solute transport. As of this report, the first two items are essentially completed. Computer simulation of fluid flow will require some revision and further study, which will be done in the second phase of this study. Computer simulation of solute transport has been considered only on a very preliminary basis. Important conclusions of this Phase I study are as follows. Assembly and reduction of data require an extensive work effort. Generally, the parameters describing fluid flow are poorly known on a regional basis and those describing solute transport are unknown.

  2. Long-term observations of regional aerosol composition at two sites in Indonesia

    International Nuclear Information System (INIS)

    Maenhaut, Willy; De Ridder, Dirk J.A.; Fernandez-Jimenez, Maria-Teresa; Hooper, Martin A.; Hooper, Bev; Nurhayati, Ms

    2002-01-01

    Aerosol samples were collected with Gent PM10 stacked filter unit (SFU) samplers at Bukit Tinggi, a mountain site on Sumatra, and at Pontianak, a sea-level site on Kalimantan. The Gent PM10 SFU sampler provides two size fractions: coarse (2-10 μm equivalent aerodynamic diameter (EAD)) and fine ( 3 at Bukit Tinggi and Pontianak, respectively. For the fine fraction, the corresponding numbers were 4.5 (2.6-9.1) and 9.4 (6.5-13) μg/m 3 . Principal component analysis was applied to the fine fraction data sets in order to identify the contributing sources (source types). At Bukit Tinggi, five components were identified, i.e., a crustal component, a biomass burning component (with loadings of 0.7-0.9 for BC, K, Br, Rb and I), an oil combustion component (with S and V), a pollution component (with Sb and Pb), and a Na component

  3. (+)- and (-)-N-allylnormetazocine binding sites in mouse brain: in vitro and in vivo characterization and regional distribution

    International Nuclear Information System (INIS)

    Compton, D.R.; Bagley, R.B.; Katzen, J.S.; Martin, B.R.

    1987-01-01

    In vivo and in vitro binding studies, both in whole brain and in selected areas, indicate that non-identical (+)- and (-)-NANM sites exist in the mouse brain, and each exhibits a different regional distribution. The in vivo binding of (+)- 3 H-NANM was found to be saturable at pharmacologically relevant doses, and represents a relatively small (10 - 22%) portion of total brain (+)- 3 H-NANM concentrations. The in vivo binding of (+)- 3 H-NANM was selectively displaced by (+)-NANM and PCP, and more sensitive to haloperidol and (+)-ketocyclazocine than the (-)- 3 H-NANM site. The in vivo binding of (-)- 3 H-NANM was selectively displaced by (-)-NANM, and more sensitive to naloxone and (-) ketocyclazocine than the (+)- 3 H-NANM site, and insensitive to PCP. This study indicates that the investigation of NANM binding sites is possible using in vivo binding techniques, and that each isomer apparently binds, in the mouse brain, to a single class of distinct sites. 32 references, 4 figures, 2 tables

  4. Regional and site-specific absolute humidity data for use in tritium dose calculations

    International Nuclear Information System (INIS)

    Etnier, E.L.

    1980-01-01

    Due to the potential variability in average absolute humidity over the continental U.S., and the dependence of atmospheric 3 H specific activity on absolute humidity, availability of regional absolute humidity data is of value in estimating the radiological significance of 3 H releases. Most climatological data are in the form of relative humidity, which must be converted to absolute humidity for dose calculations. Absolute humidity was calculated for 218 points across the U.S., using the 1977 annual summary of U.S. Climatological Data, and is given in a table. Mean regional values are shown on a map. (author)

  5. REGIONAL HYDROLOGY OF THE NOPAL 1 SITE, SIERRA PENA BLANCA, CHIHUAHUA, MEXICO

    Energy Technology Data Exchange (ETDEWEB)

    J.A. Rodriguez-Pineda; P. Goodell; P. Dobson; J. Walton; R. Olver; R. de la Garza; S. Harder

    2005-10-01

    The objectives of this report are: (1) Determine the main source of the groundwater (GW) found within the DOE wells (PB-1, PB-2, and PB-3); and (2) Determine whether the Nopal I GW has any relationship to the connectivity between the regional Encinillas Aquifer to the west and the El Cuervo Aquifer to the east.

  6. The health status of population in the regions boarding to Semipalatinsk nuclear test site

    International Nuclear Information System (INIS)

    Balmukhanov, S.B.; Raisova, G.K.; Balmukhanov, T.S.; Voronin, A.M.; Sandybaev, M.N.

    2002-01-01

    It is performed the detailed investigation the health status of Semipalatinsk region population affected by constant radioactive irradiation during 40 years. The special attention attached to such pathologies as cancer, congenial defects of development and pathologies of cardio-vascular and nervous systems. It is also characterized the children health status. (author)

  7. Prospects for natural world heritage sites in the Northwest Pacific Region

    Science.gov (United States)

    Jim Thorsell

    2007-01-01

    Alaska, northern British Columbia (BC), and the western portion of the Yukon Territory have extensive areas of wildlands that are matched by protected area systems covering some 20 percent of the land area of the region. One of the most outstanding of these is the Kluane/Wrangell-St. Elias/Glacier Bay/Tatshenshini-Alsek Park complex that is shared by all three...

  8. Chemical composition of the major components of PM in different sites at the Metropolitan Region of Chile

    Science.gov (United States)

    Reyes, F.; Castillo, M. A.; Rubio, M.; Gramsch, E.; Vasquez, Y.; Oyola, P.

    2013-05-01

    Santiago, Chile's capital is one of most polluted megacity (5.5 million of people) of the world. Currently, PM2.5 annual concentration is over 2.2 times the Chilean standard (20 μg/m3). Continuous measurements of non-refractory PM1.0 (sulfate, nitrate, chloride, ammonium and organics aerosols), black carbon, and PM2,5 mass concentration were determined using Aerosol Chemical Speciation Monitor (ACSM, Aerodyne Research, Inc), absorption coefficient monitor (SIMCA, Santiago University) and dustrack monitor (TSI Inc) in order to know the temporal variability of the major components of PM. The measurements were carried out at kerbside, urban background, industrial and mixed residential/industrial locations during year 2012 and -2013. Meteorological data (Relative Humidity, temperature, wind speed, wind direction and precipitations) were obtained from the air quality network operated by the environmental authority. The results show strong correlation with the metropolitan region major sources. Multiple regression analysis indicates that precipitations have a strong impact on PM1.0 soluble components; relative humidity has effects only on chloride, sulfate and black carbon. Chloride concentration decrease when temperature is increasing. The perceptual contribution of each component is similar among all sites. All sites shows that OA (Organics Aerosol) as the major constituent of PM1.0 (>50%), followed of nitrates (>13%). Sulfate could be used to differentiate the industrial site; due to there is a strong impact of SO2 emission. Combustion sources direct impact can be seen at BC contribution at industrial and kerbside site. Also, the OA/BC ratio shows slow value at kerbside (3.05) and industrial (3.26) site, and higher at urban background site (4.15). Aged organics aerosols are majority found at all sites (f43/f44 plot), indicating that regional background is strong in all results. These results will be compared with size distribution measurements available from previous

  9. A regional water balance for the WIPP site and surrounding area

    International Nuclear Information System (INIS)

    Hunter, R.L.

    1987-01-01

    A water balance or budget is developed as an accounting of the components of a closed hydrologic system. In the WIPP study area, water-budget techniques have previously been used to compute leakage from Lake Avalon and from potash refinery spoil ponds. A general expression for a closed hydrologic system is presented. In a developed area like the WIPP region, the water budget must include many usage factors, such as municipal or industrial pumpage. In the WIPP water-budget study area, inflows are precipitation, surface- and ground-water inflow, and the artificial addition of surface and ground water. Outflows are surface runoff, evaporation and transpiration, and ground-water outflow. Changes in storage in the WIPP region have also been documented. The WIPP water balance described here is based on a combination of long-term averages and figures for 1980. 12 refs., 5 figs., 1 tab

  10. Migration effects of Olympic siting: A pooled time series cross-sectional analysis of host regions

    OpenAIRE

    Dawn D. Thilmany; Travis J. Lybbert

    2000-01-01

    There has been considerable opposition to the 2002 Winter Olympics, to be held in the Salt Lake City metro area. This opposition stems primarily from fears of increased population growth due to the international attention. Proponents maintain that the Games will enhance the quality and quantity of jobs in the local economy, mitigating any undesirable impacts. This paper analyzes the experiences of past North American Olympic host regions, rather than the single case of Salt Lake City, to dete...

  11. TRANSPARENCY OF LOCAL AND REGIONAL SELF-GOVERNMENT IN THE PUBLICATION OF PROCUREMENT PLAN WEB SITE

    Directory of Open Access Journals (Sweden)

    Tomislav Šušnjar

    2016-12-01

    Full Text Available The main objective of this paper was to determine whether there is a Procurement Plan for 2016, on the website of local and regional selfgovernment units in the Republic of Croatia. After having applied the method of analysis, the hypothesis that local and regional self-governments in the Republic of Croatia fulfilled their legal obligation to publish the procurement plan to websites, was not confirmed. The research results show that all counties except for Međimurje County have a Procurement Plan for 2016 available on their respective websites. Out of the total of 127 cities in the Republic of Croatia, ten cities (Belišće, Čabar, Donji Miholjac, Drniš, Ilok, Imotski, Nova Gradiška, Pleternica, Popovača and Vrgorac did not publish their Procurement Plans for 2016. In addition, the survey results show that 61 municipalities do not have a published Procurement Plan for 2016 on their respective websites. This study may contribute to the knowledge of the local and regional self- government units’ websites contents in the Republic of Croatia, and encourage the employees to comply with the legal obligation to publish the procurement plan on their websites for the purpose of conducting transparent procurement.

  12. Siting of large diameter well type repositories for the central region of Russia

    International Nuclear Information System (INIS)

    Dmitriev, A.S.; Tkachenko, A.V.; Prozorov, L.B.; Guskov, A.V.; Korneva, S.A.

    2002-01-01

    To date only 14 from 16 RADON facilities are in operation. Most of them have not more than about 10% of their repositories free and available for new upcoming radioactive waste. Construction of new repositories and selection of new perspective sites is very actual problem for RAW management in Russia now. Near surface repositories are considered to be acceptable for storage of wastes with low and intermediate activity levels (LILW), which decay to safe levels in some hundreds of years. However, the experience with LILW isolation in the near surface facilities in Russia has shown that a lot of operational and natural factors impact on the engineered barriers and may cause failure of the isolation. In addition, the exploitation of the old repositories and construction of new ones require more area. Significant increase in LILW isolation reliability and area saving may be achieved by wastes disposal/storage in Large Diameter Wells (LDW), drilled in homogeneous sediments with low permeable properties. It could be considered as an intermediate between near-surface and geological repositories, and its specific features should be taken into account when choosing new sites for RAW disposal or long-term storage. (author)

  13. Site fidelity in the Sichuan Torrent Frog (Amolops mantzorum in a montane region in western China

    Directory of Open Access Journals (Sweden)

    Wen Bo Liao

    2011-12-01

    Full Text Available I used mark-recapture technique to estimate site fidelity in a subtropical high-elevation torrent frog (Amolops mantzorum during the breeding season in Fengtongzhai National Nature Reserve in western China. I captured, measured, and individually marked 30 males and 15 females in 20 May 2007. I recorded each individual’s initial positions using a Global Positioning System (GPS. For each night from 21 May to 10 June 2007, I recaptured the marked individuals and recorded capture points. The results showed that 16 males and 4 females were never recaptured in the field experiment. Most of the remaining individuals were recaptured only one time. Males and female were recaptured more than 2 and 8 times, respectively. Males and females were recaptured from subsequent positions as far apart as 55 m and 30 m, as close as 0.2 m and 0.1 m. Average neighbor distances on successive capture positions of males recaptured was 10.1 m, and that of females was 4.2 m, suggesting that there were significant difference in site fidelity between females and males. However, there was not significant average activity distance between the sexes. For females, small average activity areas were 10.9 ± 14.9 m2.

  14. Magnetic Structure of Sites of Braiding in Hi-C Active Region

    Science.gov (United States)

    Tiwari, S. K.; Alexander, C. E.; Winebarger, A.; Moore, R. L.

    2014-01-01

    High-resolution Coronal Imager (Hi-C) observations of an active region (AR) corona, at a spatial resolution of 0.2 arcsec, have offered the first direct evidence of field lines braiding, which could deliver sufficient energy to heat the AR corona by current dissipation via magnetic reconnection, a proposal given by Parker three decades ago. The energy required to heat the corona must be transported from the photosphere along the field lines. The mechanism that drives the energy transport to the corona is not yet fully understood. To investigate simultaneous magnetic and intensity structure in and around the AR in detail, we use SDO/HMI+AIA data of + / - 2 hours around the 5 minute Hi-C flight. In the case of the QS, work done by convection/granulation on the inter-granular feet of the coronal field lines probably translates into the heat observed in the corona. In the case of the AR, as here, there could be flux emergence, cancellation/submergence, or shear flows generating large stress and tension in coronal field loops which is released as heat in the corona. However, to the best of our knowledge, there is no observational evidence available to these processes. We investigate the changes taking place in the photospheric feet of the magnetic field involved with brightenings in the Hi-C AR corona. Using HMI 45s magnetograms of four hours we find that, out of the two Hi-C sub-regions where the braiding of field lines were recently detected, flux emergence takes place in one region and flux cancellation in the other. The field in these sub-regions are highly sheared and have apparent high speed plasma flows at their feet. Therefore, shearing flows plausibly power much of the coronal and transition region heating in these areas of the AR. In addition, the presence of large flux emergence/cancellation strongly suggests that the work done by these processes on the pre-existing field also drives much of the observed heating.

  15. Regional hydrogeological simulations for Forsmark - numerical modelling using CONNECTFLOW. Preliminary site description Forsmark area - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Hartley, Lee; Cox, Ian; Hunter, Fiona; Jackson, Peter; Joyce, Steve; Swift, Ben [Serco Assurance, Risley (United Kingdom); Gylling, Bjoern; Marsic, Niko [Kemakta Konsult AB, Stockholm (Sweden)

    2005-05-01

    The Swedish Nuclear Fuel and Waste Management Company (SKB) carries out site investigations in two different candidate areas in Sweden with the objective of describing the in-situ conditions for a bedrock repository for spent nuclear fuel. The site characterisation work is divided into two phases, an initial site investigation phase (IPLU) and a complete site investigation phase (KPLU). The results of IPLU are used as a basis for deciding on a subsequent KPLU phase. On the basis of the KPLU investigations a decision is made as to whether detailed characterisation will be performed (including sinking of a shaft). An integrated component in the site characterisation work is the development of site descriptive models. These comprise basic models in three dimensions with an accompanying text description. Central in the modelling work is the geological model, which provides the geometrical context in terms of a model of deformation zones and the rock mass between the zones. Using the geological and geometrical description models as a basis, descriptive models for other geo-disciplines (hydrogeology, hydro-geochemistry, rock mechanics, thermal properties and transport properties) will be developed. Great care is taken to arrive at a general consistency in the description of the various models and assessment of uncertainty and possible needs of alternative models. Here, a numerical model is developed on a regional-scale (hundreds of square kilometres) to understand the zone of influence for groundwater flow that affects the Forsmark area. Transport calculations are then performed by particle tracking from a local-scale release area (a few square kilometres) to identify potential discharge areas for the site and using greater grid resolution. The main objective of this study is to support the development of a preliminary Site Description of the Forsmark area on a regional-scale based on the available data of 30 June 2004 and the previous Site Description. A more specific

  16. Opiate antagonist binding sites in discrete brain regions of spontaneously hypertensive and normotensive Wistar-Kyoto rats

    International Nuclear Information System (INIS)

    Rahmani, N.H.; Gulati, A.; Bhargava, H.N.

    1991-01-01

    The binding of 3 H-naltrexone, an opiate receptor antagonist, to membranes of discrete brain regions and spinal cord of 10 week old spontaneously hypertensive (SHR) and normotensive Wistar-Kyoto (WKY) rats was determined. The brain regions examined were hypothalamus, amygdala, hippocampus, corpus striatum, pons and medulla, midbrain and cortex. 3 H-Naltrexone bound to membranes of brain regions and spinal cord at a single high affinity site with an apparent dissociation constant value of 3 nM. The highest density of 3 H-naltrexone binding sites were in hippocampus and lowest in the cerebral cortex. The receptor density (B max value) and apparent dissociation constant (K d value) values of 3 H-naltrexone to bind to opiate receptors on the membranes of amygdala, hippocampus, corpus striatum, pons and medulla, midgrain, cortex and spinal cord of WKY and SHR rates did not differ. The B max value of 3 H-naltrexone binding to membranes of hypothalamus of SHR rates was 518% higher than WKY rats but the K d values in the two strains did not differ. It is concluded that SHR rats have higher density of opiate receptors labeled with 3 H-naltrexone in the hypothalamus only, in comparison with WKY rats, and that such a difference in the density of opiate receptors may be related to the elevated blood pressure in SHR rats

  17. Opiate antagonist binding sites in discrete brain regions of spontaneously hypertensive and normotensive Wistar-Kyoto rats

    Energy Technology Data Exchange (ETDEWEB)

    Rahmani, N.H.; Gulati, A.; Bhargava, H.N. (Univ. of Illinois, Chicago (USA))

    1991-01-01

    The binding of {sup 3}H-naltrexone, an opiate receptor antagonist, to membranes of discrete brain regions and spinal cord of 10 week old spontaneously hypertensive (SHR) and normotensive Wistar-Kyoto (WKY) rats was determined. The brain regions examined were hypothalamus, amygdala, hippocampus, corpus striatum, pons and medulla, midbrain and cortex. {sup 3}H-Naltrexone bound to membranes of brain regions and spinal cord at a single high affinity site with an apparent dissociation constant value of 3 nM. The highest density of {sup 3}H-naltrexone binding sites were in hippocampus and lowest in the cerebral cortex. The receptor density (B{sub max}value) and apparent dissociation constant (K{sub d} value) values of {sup 3}H-naltrexone to bind to opiate receptors on the membranes of amygdala, hippocampus, corpus striatum, pons and medulla, midgrain, cortex and spinal cord of WKY and SHR rates did not differ. The B{sub max} value of {sup 3}H-naltrexone binding to membranes of hypothalamus of SHR rates was 518% higher than WKY rats but the K{sub d} values in the two strains did not differ. It is concluded that SHR rats have higher density of opiate receptors labeled with {sup 3}H-naltrexone in the hypothalamus only, in comparison with WKY rats, and that such a difference in the density of opiate receptors may be related to the elevated blood pressure in SHR rats.

  18. Regional differences in the skin blood flow at various sites of the body studied by xenon 133

    International Nuclear Information System (INIS)

    Tsuchida, Y.

    1987-01-01

    Normal skin blood flow was measured by the xenon 133 clearance method at different anatomic sites of the body and the following results were obtained. First, the skin blood flow of the face and anterior chest was significantly greater than that of the deltoid region (P less than 0.01). The skin blood flow of the dorsal side of the hand and foot was significantly lower than that of the deltoid region (P less than 0.01). A tendency was observed for the skin blood flow to decrease gradually from the upper part of the body to the lower part of the body. For example, the ratio of the highest value at the face to the lowest value at the dorsal side of the foot was about 2.5:1, indicating a remarkable difference among the various sites of the body. The skin blood flow at the dorsum of the hand was significantly higher by about 25.4 percent than that of the foot (P less than 0.01). Second, the skin blood flow at the left side of the deltoid region was higher by about 5 percent than that of the right side (P less than 0.01). Bilateral comparison of the skin blood flow at the dorsal side of the hand and foot showed that the values were almost the same on the left and right

  19. Occurrence of arbuscular mycorrhizal fungi in high altitude sites of the Patagonian Altoandina region in Nahuel Huapi National Park (Argentina

    Directory of Open Access Journals (Sweden)

    María Silvana Velázquez

    Full Text Available ABSTRACT Knowledge of the occurrence and diversity of arbuscular mycorrhizal fungi (AMF in National Parks is essential for the establishment of policies for conservation. The aim of this study was to characterize the AMF communities in the Patagonian Altoandina region in Nahuel Huapi National Park, Argentina. We surveyed AMF spores associated with the rhizospheres of 9 plant species in the Patagonian Steppe (PS, Challhuaco Hill (ChH, Catedral Hill (CH, and Tronador Hill (TH regions and detected a total of 27 Glomeromycota species. Acaulospora laevis was dominant at all sites. The AMF community was dominated by Acaulosporaceae, as regards the number of species and contribution of each one to the total number of spores. Three Glomeromycota families were detected at PS, the site with the lowest elevation; whereas five to six families were detected at ChH, CH, and TH. Cluster analysis indicated that the AMF communities were grouped according to habitat. We concluded that certain patterns of the AMFcommunity structure detected were equivalent to those of high-altitude environments from other studies, while others were unique to the Patagonian region; thus suggesting that historical influences like dispersion and speciation played a critical role in shaping AMF community composition in such high-altitude environments.

  20. A review of fire effects on vegetation and soils in the Great Basin region: response and ecological site characteristics

    Science.gov (United States)

    Miller, Richard F.; Chambers, Jeanne C.; Pyke, David A.; Pierson, Fred B.; Williams, C. Jason

    2013-01-01

    This review synthesizes the state of knowledge on fire effects on vegetation and soils in semi-arid ecosystems in the Great Basin Region, including the central and northern Great Basin and Range, Columbia River Basin, and the Snake River Plain. We summarize available literature related to: (1) the effects of environmental gradients, ecological site, and vegetation characteristics on resilience to disturbance and resistance to invasive species; (2) the effects of fire on individual plant species and communities, biological soil crusts, seed banks, soil nutrients, and hydrology; and (3) the role of fire severity, fire versus fire surrogate treatments, and post-fire grazing in determining ecosystem response. From this, we identify knowledge gaps and present a framework for predicting plant successional trajectories following wild and prescribed fires and fire surrogate treatments. Possibly the three most important ecological site characteristics that influence a site’s resilience (ability of the ecological site to recover from disturbance) and resistance to invasive species are soil temperature/moisture regimes and the composition and structure of vegetation on the ecological site just prior to the disturbance event.

  1. Satellite SAR imagery for site discovery, change detection and monitoring activities in cultural heritage sites: experiments on the Nasca region, Peru

    Science.gov (United States)

    Tapete, D.; Cigna, F.; Masini, N.; Lasaponara, R.

    2012-04-01

    Besides their suitability for multi-temporal and spatial deformation analysis, the Synthetic Aperture Radar (SAR) image archives acquired by space-borne radar sensors can be exploited to support archaeological investigations over huge sites, even those partially or totally buried and still to be excavated. Amplitude information is one of the main properties of SAR data from which it is possible to retrieve evidences of buried structures, using feature extraction and texture analysis. Multi-temporality allows the reconstruction of past and recent evolution of both landscape and built-up environment, with the possibility to detect natural and/or anthropogenic changes, including human-induced damages to the conservation of cultural heritage. We present the methodology and first results of the experiments currently undertaken using SAR data in the Nasca region (Southern Peru), where two important civilizations such as Paracas and Nasca developed and flourished from 4th century BC to the 6th century AD. The study areas include a wide spectrum of archaeological and environmental elements to be preserved, among which: the archaeological site of Cahuachi and its surroundings, considered the largest adobe Ceremonial Centre in the World; the Nasca lines and geoglyphs in the areas of Palpa, Atarco and Nasca; the ancient networks of aqueducts and drainage galleries in the Puquios area, built by Nasca in the 1st-6th centuries AD. Archaeological prospection and multi-purpose remote sensing activities are currently carried out in the framework of the Italian mission of heritage Conservation and Archaeogeophysics (ITACA), with the direct involvement of researchers from the Institute for Archaeological and Monumental Heritage and the Institute of Methodologies for Environmental Analysis, Italian National Research Council. In this context, C- and L-band SAR images covering the Nasca region since 2001 were identified for the purposes of this research and, in particular, the following

  2. [Assessment of soil degradation in regions of nuclear power explosions at Semipalatinsk Nuclear Test Site].

    Science.gov (United States)

    Evseeva, T I; Geras'kin, S A; Maĭstrenko, T A; Belykh, E S

    2011-01-01

    Degree of the soil cover degradation at the "Balapan" and "Experimental field" test sites was assessed based on Allium-test of soil toxicity results and international guidelines on radioactive restriction of solid materials (IAEA, 2004) and environment (Smith, 2005). Soil cover degradation maps of large-scale (1 : 25000) were made. The main part of the area mapped belongs to high-contaminated toxic degraded soil. A relationship between the soil toxicity and the total radionuclide activity concentrations was found to be described by power functions. When the calculated value (equal to 413-415 Bq/kg of air dry soil) increases, the soil becomes toxic for plants. This value is 7.8 times higher than the maximal value for background territories (53 Bq/kg) surrounding SNTS. Russian sanitary and hygienic guidelines (Radiation safety norms, 2009; Sanitary regulations of radioactive waste management, 2003) underestimate the degree of soil radioactive contamination for plants.

  3. An integrated approach to regional waste management and mine site rehabilitation

    Energy Technology Data Exchange (ETDEWEB)

    Reid, A.V.; Nettle, C.

    2000-07-01

    Municipal solid (putrescible) waste is expected to be treated at Woodlawn Mines using 'bioreactor' processes within the existing mine void. This paper briefly outlines legislation and regional waste management planning issues that led to the development of the Woodlawn Waste Management Facility. It also examines the application of 'bioreactor' technology as a rehabilitation strategy at Woodlawn, energy recovery opportunities and greenhouse gas savings, and the integrated manner in which mining and waste management have combined to provide unprecedented environmental outcomes across both industries. 22 refs., 3 figs., 5 tabs.

  4. Calibration of regional palaeohydrogeology and sensitivity analysis using hydrochemistry data in site investigations

    International Nuclear Information System (INIS)

    Hunter, F.M.I.; Hartley, L.J.; Hoch, A.; Jackson, C.P.; McCarthy, R.; Marsic, N.; Gylling, B.

    2008-01-01

    A transient coupled regional model of groundwater flow and solute transport has been developed, which allows the use of hydrochemical data to calibrate the model input parameters. The methodology has been illustrated using examples from the Simpevarp area in south-eastern Sweden which is being considered for geological disposal of spent nuclear fuel. The 3-dimensional model includes descriptions of spatial heterogeneity, density driven flow, rock matrix diffusion and transport and mixing of different water types, and has been simulated between 8000 BC and 2000 AD. Present-day analyses of major elemental ions and stable isotopes have been used to calibrate the model, which has then been cross checked against measured hydraulic conductivities, and against the hydrochemical interpretation of reference water mixing fractions. The key hydrogeological model sensitivities have been identified using the calibrated model and are found to include high sensitivity to the top surface flow boundary condition, the influence of variations in fracture transmissivity in different orientations (anisotropy), spatial heterogeneity in the deterministic regional deformation zones and the spacing between water bearing fractures (in terms of its effect on matrix diffusion)

  5. A synonymous polymorphic variation in ACADM exon 11 affects splicing efficiency and may affect fatty acid oxidation

    DEFF Research Database (Denmark)

    Bruun, Gitte Hoffmann; Doktor, Thomas Koed; Andresen, Brage Storstein

    2013-01-01

    beta-oxidation of medium-chain fatty acids. We examined the functional basis for this association and identified linkage between rs211718 and the intragenic synonymous polymorphic variant c.1161A>G in ACADM exon 11 (rs1061337). Employing minigene studies we show that the c.1161A allele is associated......, perhaps due to improved splicing. This study is a proof of principle that synonymous SNPs are not neutral. By changing the binding sites for splicing regulatory proteins they can have significant effects on pre-mRNA splicing and thus protein function. In addition, this study shows that for a sequence...

  6. Terminological synonyms in Czech and English sports terminologies

    Directory of Open Access Journals (Sweden)

    Michaela Cocca

    2016-11-01

    Full Text Available The following paper deals with the concept and typology of terminological synonyms in English and Czech, focusing on the official sport terms codified in English and/or Czech dictionaries. The analysis focuses on Anglicisms as terminological doublets, hyposynonyms, stylistic synonyms, and false friends. Results show that a high number of synonyms were generated by the process of transshaping or translating English terms into Czech. Our analysis suggests that there may be found three types of sports synonyms in English (real, quasi-, and pseudo- synonyms and four main types in Czech (terminological doublets, Anglicisms as hyposynonyms, false friends, and stylistic synonyms. The use of synonyms is even more evident in modern or newly created sports; mass media and the accessibility of data through the Internet playing an essential role as they mediate an immense input of information to the target population.

  7. Large-scale analyses of synonymous substitution rates can be sensitive to assumptions about the process of mutation.

    Science.gov (United States)

    Aris-Brosou, Stéphane; Bielawski, Joseph P

    2006-08-15

    A popular approach to examine the roles of mutation and selection in the evolution of genomes has been to consider the relationship between codon bias and synonymous rates of molecular evolution. A significant relationship between these two quantities is taken to indicate the action of weak selection on substitutions among synonymous codons. The neutral theory predicts that the rate of evolution is inversely related to the level of functional constraint. Therefore, selection against the use of non-preferred codons among those coding for the same amino acid should result in lower rates of synonymous substitution as compared with sites not subject to such selection pressures. However, reliably measuring the extent of such a relationship is problematic, as estimates of synonymous rates are sensitive to our assumptions about the process of molecular evolution. Previous studies showed the importance of accounting for unequal codon frequencies, in particular when synonymous codon usage is highly biased. Yet, unequal codon frequencies can be modeled in different ways, making different assumptions about the mutation process. Here we conduct a simulation study to evaluate two different ways of modeling uneven codon frequencies and show that both model parameterizations can have a dramatic impact on rate estimates and affect biological conclusions about genome evolution. We reanalyze three large data sets to demonstrate the relevance of our results to empirical data analysis.

  8. Peat leachmound treatment of on-site domestic septic effluent in cold region environments

    Energy Technology Data Exchange (ETDEWEB)

    Riznyk, Z; Rockwell, J [Alaska Pacific University, Anchorage (Alaska); Reid, L C; Reid, S L [Alaska Pacific University, Anchorage (Alaska). Environmental Control Services

    1990-01-01

    A two-year study of two pilot peat leachmounds has demonstrated that under cold region conditions of subzero temperatures, severe periodic storm events and break-up of winter ice and snow, that domestic septic tank effluent can be treated for subsurface or suface discharge. The quality of the peat leachate is similar to wastewater which has undergone tertiary treatment. It is our contention that peat leachmounds can be designed to treat the wastewater of Alaskan bush communities which to date still rely on privies and honey buckets. Not only could peat leachmounds be used in rural Alaska, but this technology could be extended to other northern tier counties such as the Soviet Union and Canada to improve the living conditions of the area's rural residents.

  9. Does the Walker Lane extend through the Nevada test site region?

    International Nuclear Information System (INIS)

    Fridrich, C.; O'Leary, D.

    1993-01-01

    The southeastern terminus of the Walker Lane is poorly defined and poorly understood. Recent work in and around the Nevada Test Site (NTS) suggests the presence of a structural zone that may be an extension of the Walker Lane, and that may be continuous with the Las Vegas valley shear zone farther to the southeast. Unlike the Walker Lane, large through-going strike-slip faults have not been found in the NTS zone. Instead, the strike-slip faults present are few, are relatively short, commonly consist of diffuse fault zones, are interconnected poorly if at all, and largely appear to represent zones of accommodation between domains in which extension occurred at different times and to different degrees. However, the majority of these right-slip and left-slip faults are northwest-trending and northeast-trending, respectively, suggesting that plate motions may have played a role in the creation of these accommodation zones. An obstacle to understanding the NTS zone is that major ignimbrite sheets and calderas of the southwestern Nevada volcanic field (SNVF) formed in this zone at the height of late Tertiary tectonic activity, possibly burying much of the structural evidence. The NTS zone could represent an intersection of the Walker Lane with another major structural feature, a significant bend in the Walker Lane, or a transtensional tear that localized accommodation structures as well as the prominent late Miocene calderas of the SNVF. Ongoing field work is aimed at determining which of these and competing interpretations is best

  10. A breeding site model for regional, dynamical malaria simulations evaluated using in situ temporary ponds observations

    Directory of Open Access Journals (Sweden)

    Ernest O. Asare

    2016-03-01

    Full Text Available Daily observations of potential mosquito developmental habitats in a suburb of Kumasi in central Ghana reveal a strong variability in their water persistence times, which ranged between 11 and 81 days. The persistence of the ponds was strongly tied with rainfall, location and size of the puddles. A simple power-law relationship is found to fit the relationship between the average pond depth and area well. A prognostic water balance model is derived that describes the temporal evolution of the pond area and depth, incorporating the power-law geometrical relation. Pond area increases in response to rainfall, while evaporation and infiltration act as sink terms. Based on a range of evaluation metrics, the prognostic model is judged to provide a good representation of the pond coverage evolution at most sites. Finally, we demonstrate that the prognostic equation can be generalised and equally applied to a grid-cell to derive a fractional pond coverage, and thus can be implemented in spatially distributed models for relevant vector- borne diseases such as malaria.

  11. A breeding site model for regional, dynamical malaria simulations evaluated using in situ temporary ponds observations.

    Science.gov (United States)

    Asare, Ernest O; Tompkins, Adrian M; Amekudzi, Leonard K; Ermert, Volker

    2016-03-31

    Daily observations of potential mosquito developmental habitats in a suburb of Kumasi in central Ghana reveal a strong variability in their water persistence times, which ranged between 11 and 81 days. The persistence of the ponds was strongly tied with rainfall, location and size of the puddles. A simple power-law relationship is found to fit the relationship between the average pond depth and area well. A prognostic water balance model is derived that describes the temporal evolution of the pond area and depth, incorporating the power-law geometrical relation. Pond area increases in response to rainfall, while evaporation and infiltration act as sink terms. Based on a range of evaluation metrics, the prognostic model is judged to provide a good representation of the pond coverage evolution at most sites. Finally, we demonstrate that the prognostic equation can be generalised and equally applied to a grid-cell to derive a fractional pond coverage, and thus can be implemented in spatially distributed models for relevant vector- borne diseases such as malaria.

  12. Strategic Location and Territorial Integrity: The Role of Subsidiary Sites in the Classic Maya Kingdoms of the Upper Usumacinta Region

    Directory of Open Access Journals (Sweden)

    Armando Anaya Hernández

    2006-03-01

    Full Text Available The Upper Usumacinta region was the scene of an intense interaction between the different kingdoms of the Classic Maya Period. This interaction took the form of political and marriage alliances as well as warfare and is well attested in the inscribed monuments of the region, especially towards the Late Classic Period (c. AD 600-900. Through this interaction the Maya rulers would not only assert their claim to power but also ensure the boundaries of their kingdoms, with an eye to accruing a vaster domain. The definition of the political organisation and territorial extent of the Maya Lowland kingdoms is an issue that has attracted the attention of various scholars (Adams 1981; Adams and Jones 1981; Ball and Taschek 1991; Flannery 1972; Freidel 1981; Hammond 1974; 1981; Inomata and Aoyama 1996; Mathews 1988; 1991; Sanders 1981. Like these scholars, I have presented a model aimed at estimating the territorial extent of the kingdoms of the Upper Usumacinta region, taking into account the physical characteristics of the terrain (Anaya Hernández 2001. In this article I approach this issue again, focusing this time on the importance that the subsidiary centres located at strategic locations across the landscape had for the maintenance of the territorial integrity of the kingdoms of Pomoná and Piedras Negras. The political importance of these sites is reflected in the efforts that the kings of these polities went through to warrant the loyalty of the rulers of these secondary centres, as can be attested by the presence of a sculptured stela at the site of Panhalé, in the vicinity of Pomoná, and an inscribed wooden box found within the Redención del Campesino Valley that makes reference to a Piedras Negras ruler. To address this issue I took advantage of the capabilities that GIS offers to model movement across the physical setting in order to define the potential boundaries between the aforementioned kingdoms in the light of the available

  13. Central interstate low-level radioactive waste compact region site exclusionary screening study. Phase I. Final report

    International Nuclear Information System (INIS)

    1985-06-01

    The Low-Level Radioactive Waste Policy Act of 1980 assigns to the states the responsibility for disposal of the low-level radioactive waste generated within their boundaries. It also provides for regional compacts among states to address their needs on a broader basis and permits restriction of the use of regional disposal facilities after January 1, 1986, to generators of low-level waste within the region. Each state, either individually or as a member of a compact, must therefore consider the establishment of a low-level radioactive waste disposal facility within its borders. The states of Arkansas, Kansas, Louisiana, Nebraska, and Oklahoma adopted the Central Interstate Low-Level Waste Compact (CILLWC) and legislation was submitted to Congress for consent in June of 1983 legislation is being reintroduced in the 99th Congress. In August of 1984, the CILLWC selected and contracted Dames and Moore to conduct a Phase I-Site Suitability Screening Study for a low-level radioactive waste disposal facility in the five-state region. This report presents the results of the Phase I Screening Study. Dames and Moore reported to the Technical Advisory Committee (TAC) of the CILLWC which provided guidance and comment on work progress and direction

  14. Mesozoic and Cenozoic structural geology of the CP Hills, Nevada Test Site, Nye County, Nevada; and regional implications

    Energy Technology Data Exchange (ETDEWEB)

    Caskey, S. John [Univ. of Nevada, Reno, NV (United States)

    1991-08-01

    Detailed mapping and structural analysis of upper Proterozoic and Paleozoic rocks in the CP Hills of the Nevada Test Site, together with analysis of published maps and cross sections and a reconnaissance of regional structural relations indicate that the CP thrust of Barnes and Poole (1968) actually comprises two separate, oppositely verging Mesozoic thrust systems: (1) the west-vergent CP thrust which is well exposed in the CP Hills and at Mine Mountain, and (2) the east-vergent Belted Range thrust located northwest of Yucca Flat. West-vergence of the CP thrust is indicated by large scale west-vergent recumbent folds in both its hangingwall and footwall and by the fact that the CP thrust ramps up section through hangingwall strata toward the northwest. Regional structural relations indicate that the CP thrust forms part of a narrow sigmoidal belt of west-vergent folding and thrusting traceable for over 180 km along strike. The Belted Range thrust represents earlier Mesozoic deformation that was probably related to the Last Chance thrust system in southeastern California, as suggested by earlier workers. A pre-Tertiary reconstruction of the Cordilleran fold and thrust belt in the region between the NTS and the Las Vegas Range bears a close resemblance to other regions of the Cordillera and has important implications for the development of hinterland-vergent deformation as well as for the probable magnitude of Tertiary extension north of Las Vegas Valley. Subsequent to Mesozoic deformation, the CP Hills were disrupted by at least two episodes of Tertiary extensional deformation: (1) an earlier episode represented by pre-middle Miocene low-angle normal faults, and (2) a later, post-11 Ma episode of high-angle normal faulting. Both episodes of extension were related to regional deformation, the latter of which has resulted in the present basin and range topography of the NTS region.

  15. Mesozoic and Cenozoic structural geology of the CP Hills, Nevada Test Site, Nye County, Nevada; and regional implications

    International Nuclear Information System (INIS)

    Caskey, S.J.

    1991-08-01

    Detailed mapping and structural analysis of upper Proterozoic and Paleozoic rocks in the CP Hills of the Nevada Test Site, together with analysis of published maps and cross sections and a reconnaissance of regional structural relations indicate that the CP thrust of Barnes and Poole (1968) actually comprises two separate, oppositely verging Mesozoic thrust systems: (1) the west-vergent CP thrust which is well exposed in the CP Hills and at Mine Mountain, and (2) the east-vergent Belted Range thrust located northwest of Yucca Flat. West-vergence of the CP thrust is indicated by large scale west-vergent recumbent folds in both its hangingwall and footwall and by the fact that the CP thrust ramps up section through hangingwall strata toward the northwest. Regional structural relations indicate that the CP thrust forms part of a narrow sigmoidal belt of west-vergent folding and thrusting traceable for over 180 km along strike. The Belted Range thrust represents earlier Mesozoic deformation that was probably related to the Last Chance thrust system in southeastern California, as suggested by earlier workers. A pre-Tertiary reconstruction of the Cordilleran fold and thrust belt in the region between the NTS and the Las Vegas Range bears a close resemblance to other regions of the Cordillera and has important implications for the development of hinterland-vergent deformation as well as for the probable magnitude of Tertiary extension north of Las Vegas Valley. Subsequent to Mesozoic deformation, the CP Hills were disrupted by at least two episodes of Tertiary extensional deformation: (1) an earlier episode represented by pre-middle Miocene low-angle normal faults, and (2) a later, post-11 Ma episode of high-angle normal faulting. Both episodes of extension were related to regional deformation, the latter of which has resulted in the present basin and range topography of the NTS region

  16. Regional hydrogeological simulations. Numerical modelling using ConnectFlow. Preliminary site description Simpevarp sub area - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Hartley, Lee; Hoch, Andrew; Hunter, Fiona; Jackson, Peter [Serco Assurance, Risley (United Kingdom); Marsic, Niko [Kemakta Konsult, Stockholm (Sweden)

    2005-02-01

    The Swedish Nuclear Fuel and Waste Management Company (SKB) carries out site investigations in two different candidate areas in Sweden with the objective of describing the in situ conditions for a bedrock repository for spent nuclear fuel. The two candidate areas are named Forsmark and Simpevarp. The site characterisation work is divided into two phases, an initial site investigation phase (IPLU) and a complete site investigation phase (KPLU). The results of IPLU are used as a basis for deciding on a subsequent KPLU phase. On the basis of the KPLU investigations a decision is made as to whether detailed characterisation will be performed (including sinking of a shaft).An integrated component in the site characterisation work is the development of site descriptive models. These comprise basic models in three dimensions with an accompanying text description. Central in the modelling work is the geological model which provides the geometrical context in terms of a model of deformation zones and the rock mass between the zones. Using the geological and geometrical description models as a basis, descriptive models for other geo-disciplines (hydrogeology, hydro-geochemistry, rock mechanics, thermal properties and transport properties) will be developed. Great care is taken to arrive at a general consistency in the description of the various models and assessment of uncertainty and possible needs of alternative models.Here, a numerical model is developed on a regional-scale (hundreds of square kilometres) to understand the zone of influence for groundwater flow that effects the Simpevarp area. Transport calculations are then performed by particle tracking from a local-scale release area (tens of square kilometres) to identify potential discharge areas for the site. The transport from the two site-scale release areas (a few square kilometres) at the Simpevarp site and the Laxemar site are also considered more specifically and using greater grid resolution.The main

  17. Physicochemical and bacteriological quality of bottled drinking water in three sites of Amhara Regional State, Ethiopia.

    Science.gov (United States)

    Biadglegne, Fantahun; Tessema, Belay; Kibret, Mulugeta; Abera, Bayeh; Huruy, Kahsay; Anagaw, Belay; Mulu, Andargachew

    2009-10-01

    The consumption of bottled drinking water is becoming increasing in Ethiopia. As a result there has been a growing concern about the chemical, physical and bacteriological quality of this product. Studies on the chemical, physical and bacteriological quality of bottled water is quite scarce in Ethiopia. This study was therefore aimed to assess the physicochemical and bacteriological qualities of three factories of bottled drinking water products produced in Amhara region. A Laboratory based comparative study was conducted to evaluate the physicochemical and bacteriological quality of three factories of bottled drinking water produced in Amhara region. Analysis on the quality of bottled drinking water from the sources, wholesalers and retailers were made with World Health Organization and Quality and Standards Authority of Ethiopia recommendations. Triplicate samples from three types of bottled drinking water were randomly collected and analyzed from June, 2006 to December, 2006. A total of 108 commercial bottled drinking water samples were analyzed. The result showed that except pH of factory A all the physicochemical parameters analyzed were with in the recommended limits. The pH value of factory A tested from sources is 5.3 and from wholesalers and retailers is 5.5 and 5.3, respectively, which is below the normal value set by World Health Organization (6.5-8.0) and Quality and Standards Authority of Ethiopia (6.0-8.5). Our analyses also demonstrated that 2 (16.7%) of the samples tested from sources and 1 (8.3%) from wholesalers of factory B were contaminated with total coliforms, where as 2 (16.7%) samples from retailers were also contaminated with total coliforms. On the other hand, 1 (8.3%) of the samples tested from wholesalers and 2 (16.7%) of the samples tested from retailers of factory A were also contaminated with total coliforms. Total coliforms were not detected from all samples of factory C, fecal coliforms were not also isolated from all samples

  18. Trends in body weight for 7-year boys from different environmental sites of copper mining region

    Directory of Open Access Journals (Sweden)

    Paweł Posłuszny

    2011-12-01

    Full Text Available Background. The epidemic of the XXI century – a disease that threatens through development of other ailments, caused by pathological accumulation of adipose tissue in the body, beyond the physiological needs and adaptability – the obesity. A significant number of diseases are largely a consequence of obesity, and despite the fact that it mainly occurs in adults, that problem may start influencing our health from an early age. In childhood and adolescence the most common form is simple obesity, and frequency of occurrence shows significant growing trend, regardless of gender. The prevalence of obesity in early stages of life is associated with a significant probability of a continuation of or increase in adulthood, therefore one should look for the onset of obesity in childhood. The results of studies and projections show steady growth in the number of overweight and obese in populations of developing countries and developed economies, including Poland. Therefore it is important to continuously monitor body weight and degree of fatness of children and adolescents. Material and methods. The study was conducted in 2001 and 2002 in six rural primary schools from the Copper Mining Region and in all three primary schools from Polkowice. More measurements were made in 2008 and 2010. The total number of 7-year old boys was 277. The measurements covered Body height, Body weight, Lean Body Mass, Total Body Water and Total Body Fat. These data were collected with the use of anthropometer, body scale and FUTREX 5000, the optical body composition analyzer. Measurements were necessary to get the BMI. Results. Based on analysis, it was observed that the height and weight of 7-year-old boys from the Copper Mining Region has increased compared to the first series of tests. The BMI and amount of body fat have also increased. This situation was observed both in rural and urban environment. There was a difference in body fat percentage. Lower values were

  19. Investigating regional mobility in the southern hinterland of the Wari Empire: biogeochemistry at the site of Beringa, Peru.

    Science.gov (United States)

    Knudson, Kelly J; Tung, Tiffiny A

    2011-06-01

    Empires have transformed political, social, and environmental landscapes in the past and present. Although much research on archaeological empires focuses on large-scale imperial processes, we use biogeochemistry and bioarchaeology to investigate how imperialism may have reshaped regional political organization and regional migration patterns in the Wari Empire of the Andean Middle Horizon (ca. AD 600-1000). Radiogenic strontium isotope analysis of human remains from the site of Beringa in the Majes Valley of southern Peru identified the geographic origins of individuals impacted by the Wari Empire. At Beringa, the combined archaeological human enamel and bone values range from (87)Sr/(86)Sr = 0.70802 - 0.70960, with a mean (87)Sr/(86)Sr = 0.70842 ± 0.00027 (1σ, n = 52). These data are consistent with radiogenic strontium isotope data from the local fauna in the Majes Valley and imply that most individuals were local inhabitants, rather than migrants from the Wari heartland or some other locale. There were two outliers at Beringa, and these "non-local" individuals may have derived from other parts of the South Central Andes. This is consistent with our understanding of expansive trade networks and population movement in the Andean Middle Horizon, likely influenced by the policies of the Wari Empire. Although not a Wari colony, the incorporation of small sites like Beringa into the vast social and political networks of the Middle Horizon resulted in small numbers of migrants at Beringa. Copyright © 2011 Wiley-Liss, Inc.

  20. Estimation of the Altai region population exposure resulting from the nuclear tests at the Semipalatinsk test site

    International Nuclear Information System (INIS)

    Djachenko, V.I.; Gabbasov, M.N.; Laborev, V.M.; Markovtsev, A.S.; Sudakov, V.V.; Volobuyev, N.M.; Zelenov, V.I.; Lagutin, A.A.; Shoikher, J.N.

    1998-01-01

    The historical roots of reconstruction of doses received by populations from nuclear tests date back to the 60''s, when the world faced a problem of growing radioactive contamination by radioactive fallout resulting from atmospheric nuclear tests. Since then, only one aspect of this problem has been properly developed, namely: public-exposure doses resulting from the global radioactive fallout have been estimated. Local fallout, which occurred mainly in the territories of the test sites and regions adjacent to their boundaries, was considered and studied as an internal affair of the states. The first steps in creating the above-mentioned methodological basis were taken in Russia, where, by now, the methodology of dose estimation in regions of local radioactive fallout has been determined and acknowledged nationwide as a standard document (Federal Committee on Sanitay Epidemiological Control of RF, 1994). It was this methodology that was used for calculations and dose estimation of the exposure of the Altai population from the Semipalatinsk Test Site (STS). (orig./GL)

  1. Biogas plants site selection integrating Multicriteria Decision Aid methods and GIS techniques: A case study in a Portuguese region

    International Nuclear Information System (INIS)

    Silva, Sandra; Alçada-Almeida, Luís; Dias, Luís C.

    2014-01-01

    This work addresses the problem of determining the most suitable sites for locating biogas plants using dairy manure as feedstock, specifically in the Entre-Douro-e-Minho Region in Portugal. A Multicriteria Spatial Decision Support System is developed to tackle this complex multicriteria decision-making problem, involving constraints and many environmental, economic, safety, and social factors. The approach followed combines the use of a Geographic Information System (GIS) to manage and process spatial information with the flexibility of Multicriteria Decision Aid (MCDA) to assess factual information (e.g. soil type, slope, infrastructures) with more subjective information (e.g. expert opinion). The MCDA method used is ELECTRE TRI, an outranking-type method that yields a classification of the possible alternatives. The results of the performed analysis show that the use of ELECTRE TRI is suitable to address real-world problems of land suitability, leading towards a flexible and integrated assessment. - Highlights: • We present a spatial multi-criteria methodology to decide biogas plants siting. • Methodology combines ELECTRE TRI with GIS for spatial analysis. • Constraints and environmental, economic and social factors have been identified. • The methodology is illustrated with application to a case study in the EDM Region. • A suitability map was generated, identifying the most suitable biogas plant locations

  2. Installation restoration program site investigation. Gulfport Field Training Site, Mississippi Air National Guard Gulfport-Biloxi Regional Airport Gulfport, Mississippi. Volume 2. Final report

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1992-12-01

    Site Investigation Report, Volume: 2. A Site Investigation was performed at 3 sites at the Combat Readiness Training Center, Gulfport-Bolixi. The 3 sites investigated are the: Former Fire Training Area (Site 1), the Former JP-4 Bulk Storage Area, Mill Road (Site 2), and the Motor Pool Above-Ground Diesel Fuel Storage Tank Area (Site 3). The findings of this investigation recommended further investigation at the Fire Training Area and the JP-4 Bulk Storage Tank. At Site 3 the levels of contamination did not represent a risk to human health or the environment; therefore, no further action was recommended. Volume two of this report consisted of the following Appendixes: Site Photographs (A), Well Inventory (B), Boring Logs (C), CSL Technical Memorandum (D), Data Review and Validation (E), GPS Memorandum (F), Level C Analytical Data Summary Tables (G), Slug Test (H), Special-Status Species (I), and Representative Species of Less Mobile Fish and Wildlife (J).

  3. New site selection for the immigrant transit of the post-disaster reconstruction of Wenchuan earthquake region

    Science.gov (United States)

    Yang, Wunian; Hu, Guochao; Liu, Hanhu; Peng, Li

    2009-06-01

    The strong earthquake struck on 12 May 2008 destroyed numerous houses in Wenchuan, Sichuan, China. This earthquake escalated the scale of existing geological disasters, undermined the stability of earthquake-prone zones, and triggered landslides and many other hidden disasters. In addition, many aftershocks and heavy rainfalls have prompted secondary disasters and consequently, the actual damages have been doubled in terms of scale and magnitude. Since some regions there are no longer appropriate for people to live, temporary housing and post-disaster reconstruction are badly needed. Recent advances in remote sensing and geospatial technologies have promoted their successful applications in siting engineering. Because of different research backgrounds, geological disasters and vegetation density were rarely incorporated as primary parameters for siting assessment. Based on the principles of avoiding active faults and encouraging synthetic prevention of geological disasters, we performed a locating analysis using part of the Wenchuan County as a case. Six major parameters were used to build a siting model, including geological disasters, vegetation index, stream systems, faults, terrain slope, and elevation. The results show that the proposed method can provide useful information for decision-making in the selection of temporary housing and post-disaster reconstruction.

  4. The Mawrth Vallis region of Mars: A potential landing site for the Mars Science Laboratory (MSL) mission.

    Science.gov (United States)

    Michalski, Joseph R; Jean-PierreBibring; Poulet, François; Loizeau, Damien; Mangold, Nicolas; Dobrea, Eldar Noe; Bishop, Janice L; Wray, James J; McKeown, Nancy K; Parente, Mario; Hauber, Ernst; Altieri, Francesca; Carrozzo, F Giacomo; Niles, Paul B

    2010-09-01

    The primary objective of NASA's Mars Science Laboratory (MSL) mission, which will launch in 2011, is to characterize the habitability of a site on Mars through detailed analyses of the composition and geological context of surface materials. Within the framework of established mission goals, we have evaluated the value of a possible landing site in the Mawrth Vallis region of Mars that is targeted directly on some of the most geologically and astrobiologically enticing materials in the Solar System. The area around Mawrth Vallis contains a vast (>1 × 10⁶ km²) deposit of phyllosilicate-rich, ancient, layered rocks. A thick (>150 m) stratigraphic section that exhibits spectral evidence for nontronite, montmorillonite, amorphous silica, kaolinite, saponite, other smectite clay minerals, ferrous mica, and sulfate minerals indicates a rich geological history that may have included multiple aqueous environments. Because phyllosilicates are strong indicators of ancient aqueous activity, and the preservation potential of biosignatures within sedimentary clay deposits is high, martian phyllosilicate deposits are desirable astrobiological targets. The proposed MSL landing site at Mawrth Vallis is located directly on the largest and most phyllosilicate-rich deposit on Mars and is therefore an excellent place to explore for evidence of life or habitability.

  5. Geomorphological assessment of sites and impoundments for the long term containment of uranium mill tailings in the Alligator Rivers Region

    International Nuclear Information System (INIS)

    East, T.J.

    1985-01-01

    Current and future research into the geomorphological processes likely to affect the long term containment of uranium mill tailings in the Alligator Rivers Region is directed at three main areas: identification of geomorphic hazards at proposed impoundment sites; determination of erosion rates on impoundment slopes; and prediction of patterns of fluvial dispersal of released tailings. Each necessitates consideration of present and future geomorphic processes. Process rates during the next few thousand years might be predictable by extrapolation of contemporary and past (i.e. Holocene) climates, sea-levels and depositional environments, evidence for which is preserved in the sedimentary record. In current projects, the Late Quarternary stratigraphy of Magela Creek are examined to provide data for modelling of present and future sedimentological processes. Site stability evaluation entails recognition of present and future geomorphic hazards at impoundment sites, and includes fluvial and hillslope erosion, extreme flood events and mass movements. The life of a tailings impoundment is further determined by the intensity of erosional processes acting upon its slopes and their cover materials. A knowledge of present and future erosion rates will allow the optimisation of slope characteristics and materials in the impoundment design

  6. Artificial radionuclides in oils from the underground nuclear test site (Perm region, Russia)

    International Nuclear Information System (INIS)

    Kalmykov, S.N.; Sapozhnikov, Yu.A.; Goloubov, B.N.

    1998-01-01

    Underground nuclear tests (UNT) are one of the possible sources of radioactive contamination of environment. About 2500 UNTs were carried out both for military and industrial (peaceful) purposes. In the former Soviet Union most of peaceful UNTs were oriented to the needs of the gas- and oil-extracting industry. Earlier it was considered that the holes of UNT are hermetic and the leakage of radionuclides is negligible. In this work nine oil samples from Gezh oil deposit in Perm region of Russia collected from different holes both where the explosion took part and from distant holes were analyzed for 3 H and 14 C and such fission products as 90 Sr and 134,137 Cs. For the determination of gamma-emitting radionuclides the gamma spectrometry with HPGe detector was used. For 90 Sr determination the measurements of Cherenkov radiation generated by daughter 90 Y were carried out with liquid scintillation equipment. It showed that even in the oil samples from the hole where the explosion took place no measurable 134,137 Cs and 90 Sr activities were detected. For 3 H and 14 C determination the oil samples were fractionated by distillation. For each sample 10-12 fractions were taken. Liquid scintillation spectrometry was used for 3 H and 14 C simultaneous determination. It was shown that in all samples the 3 H and 14 C concentrations are higher than the background level and for the hole where the explosion took place reached the value of about 1.3 x 10 5 Bq/L for low boiling fraction (40-750C). The 3 H and 14 C enrichment of oils from distant holes shows that UNT cavities are not hermetic and the radionuclide migration is not negligible. (author)

  7. Establishment of a Site-Specific Tropospheric Model Based on Ground Meteorological Parameters over the China Region.

    Science.gov (United States)

    Zhou, Chongchong; Peng, Bibo; Li, Wei; Zhong, Shiming; Ou, Jikun; Chen, Runjing; Zhao, Xinglong

    2017-07-27

    China is a country of vast territory with complicated geographical environment and climate conditions. With the rapid progress of the Chinese BeiDou satellite navigation system (BDS); more accurate tropospheric models must be applied to improve the accuracy of navigation and positioning. Based on the formula of the Saastamoinen and Callahan models; this study develops two single-site tropospheric models (named SAAS_S and CH_S models) for the Chinese region using radiosonde data from 2005 to 2012. We assess the two single-site tropospheric models with radiosonde data for 2013 and zenith tropospheric delay (ZTD) data from four International GNSS Service (IGS) stations and compare them to the results of the Saastamoinen and Callahan models. The experimental results show that: the mean accuracy of the SAAS_S model (bias: 0.19 cm; RMS: 3.19 cm) at all radiosonde stations is superior to those of the Saastamoinen (bias: 0.62 cm; RMS: 3.62 cm) and CH_S (bias: -0.05 cm; RMS: 3.38 cm) models. In most Chinese regions; the RMS values of the SAAS_S and CH_S models are about 0.51~2.12 cm smaller than those of their corresponding source models. The SAAS_S model exhibits a clear improvement in the accuracy over the Saastamoinen model in low latitude regions. When the SAAS_S model is replaced by the SAAS model in the positioning of GNSS; the mean accuracy of vertical direction in the China region can be improved by 1.12~1.55 cm and the accuracy of vertical direction in low latitude areas can be improved by 1.33~7.63 cm. The residuals of the SAAS_S model are closer to a normal distribution compared to those of the Saastamoinen model. Single-site tropospheric models based on the short period of the most recent data (for example 2 years) can also achieve a satisfactory accuracy. The average performance of the SAAS_S model (bias: 0.83 cm; RMS: 3.24 cm) at four IGS stations is superior to that of the Saastamoinen (bias: -0.86 cm; RMS: 3.59 cm) and CH_S (bias: 0.45 cm; RMS: 3.38 cm

  8. Cyclosporine suppression of lymphocyte recruitment, regional blood flow, and vascular permeability at sites of allogeneic cellular interactions

    International Nuclear Information System (INIS)

    Hanto, D.W.; Harty, J.T.; Hoffman, R.; Simmons, R.L.

    1983-01-01

    Although cyclosporine (CsA) has been thought to act primarily on the afferent phase of the immune response, we can demonstrate that it also acts at the efferent phase. The effect of CsA on lymphocyte recruitment (LR), regional blood flow (RBF), and vascular permeability (VP) was studied in paired, healed, subcutaneously placed urethane sponge grafts inoculated with specifically sensitized lymphocytes (SSLs) and allogeneic target cells. Intravenous injection of 111 In-labelled unsensitized lymphocytes, 86 RbCl and 125 I-labelled albumin were used to assess LR, RBF, and VP, respectively. Suspensions of SSL and targets in CsA at 10 and 1 microgram/ml prior to graft inoculation markedly reduce the preferential increase in LR to the site of interaction between SSLs and targets bearing the sensitizing alloantigen (P less than 0.002 for both). Similarly, CsA blocks the preferential increase in RBF (P . 0.017) and VP (P less than 0.002) to the graft site. These effects persist for at least 24 hours. If SSLs and targets are washed after incubation with CsA, LR is still reduced. These results are consistent with the idea that cell-bound CsA blocks the elaboration of lymphokines which results from the interaction between SSLs and specific alloantigen in vivo. These lymphokines increase RBF and VP and are accompanied by an increase in LR. Inhibition of these vascular effects may prevent the recruitment of additional lymphocytes to the graft site. CsA may, therefore, prevent or interrupt allograft rejection by blocking amplification of the rejection mechanism at the graft site

  9. The Nym Family: Synonyms, Antonyms, Homonyms, Acronyms.

    Science.gov (United States)

    Cummings, Melodie

    Intended to help students improve their vocabulary and spelling skills, this booklet offers activities on synonyms, antonyms, homonyms (including homophones and homographs), and acronyms. It is suggested that the teacher present these types of words as members of the "Nym Family." Ideas for posters and books to be used as instructional…

  10. Landmark Image Retrieval Using Visual Synonyms

    NARCIS (Netherlands)

    Gavves, E.; Snoek, C.G.M.

    2010-01-01

    In this paper, we consider the incoherence problem of the visual words in bag-of-words vocabularies. Different from existing work, which performs assignment of words based solely on closeness in descriptor space, we focus on identifying pairs of independent, distant words - the visual synonyms -

  11. Visual synonyms for landmark image retrieval

    NARCIS (Netherlands)

    Gavves, E.; Snoek, C.G.M.; Smeulders, A.W.M.

    2012-01-01

    In this paper, we address the incoherence problem of the visual words in bag-of-words vocabularies. Different from existing work, which assigns words based on closeness in descriptor space, we focus on identifying pairs of independent, distant words - the visual synonyms - that are likely to host

  12. A registry for exposure and population health in the Altai region affected by fallout from the Semipalatinsk nuclear test site.

    Science.gov (United States)

    Shoikhet, Y N; Kiselev, V I; Zaitsev, E V; Kolyado, I B; Konovalov, B Y; Bauer, S; Grosche, B; Burkart, W

    1999-09-01

    A registry of the rural population in the Altai region exposed to fallout from nuclear tests at the Semipalatinsk test site (STS) was established more than four decades after the first Soviet nuclear explosion on August 29, 1949. Information about individuals living in an exposed and a control area was collected using all available local sources, such as kolkhoz documentation, school registries, medical treatment records and interviews with residents. As a result, a database comprising an exposed group of 39 179 individuals from 53 Altai region villages, 6769 external and 3303 internal controls was compiled. For several settlements, effective dose estimates reached the level of 1.5 Sv, while the average effective dose estimate in the exposed group was 340 mSv. Dosimetric data, vital status information and health records gathered at rayon and village medical facilities are held in the registry. Cause-of-death information for deceased residents is obtained from death registration forms archived at the Altai region vital statistics office. At present, a follow-up of approximately 40% of the population exposed in 1949 has been done. More will be added by searching for migrants to the larger towns of the Altai region, i.e. Barnaul, Rubtsovsk and Biisk. In order to assess the influence of radiation exposure, analytical studies with a case-control design for stomach and lung cancer are currently being prepared. The number of known cases is sufficient to detect an odds ratio of 1.5 at the 95% confidence level. Epidemiological studies in populations affected by fallout from STS may be equally important to the atomic bomb survivors' study for the direct quantification of radiation effects. The range of exposure rates experienced will extend the acute high-dose-rate findings from Hiroshima/Nagasaki towards acute and protracted lower exposures, which are more relevant for radiation protection issues.

  13. A registry for exposure and population health in the Altai region affected by fallout from the Semipalatinsk nuclear test site

    International Nuclear Information System (INIS)

    Shoikhet, Ya.N.; Kiselev, V.I.; Zaitsev, E.V.; Kolyado, I.B.; Konovalov, B.Yu.; Bauer, S.; Grosche, B.; Burkart, W.

    1999-01-01

    A registry of the rural population in the Altai region exposed to fallout from nuclear tests at the Semipalatinsk test site (STS) was established more than four decades after the first Soviet nuclear explosion on August 29, 1949. Information about individuals living in an exposed and a control area was collected using all available local sources, such as kolkhoz documentation, school registries, medical treatment records and interviews with residents. As a result, a database comprising an exposed group of 39 179 individuals from 53 Altai region villages, 6769 external and 3303 internal controls was compiled. For several settlements, effective dose estimates reached the level of 1.5 Sv, while the average effective dose estimate in the exposed group was 340 mSv. Dosimetric data, vital status information and health records gathered at rayon and village medical facilities are held in the registry. Cause-of-death information for deceased residents is obtained from death registration forms archived at the Altai region vital statistics office. At present, a follow-up of approximately 40% of the population exposed in 1949 has been done. More will be added by searching for migrants to the larger towns of the Altai region, i.e. Barnaul, Rubtsovsk and Biisk. In order to assess the influence of radiation exposure, analytical studies with a case-control design for stomach and lung cancer are currently being prepared. The number of known cases is sufficient to detect an odds ratio of 1.5 at the 95% confidence level. Epidemiological studies in populations affected by fallout from STS may be equally important to the atomic bomb survivors' study for the direct quantification of radiation effects. The range of exposure rates experienced will extend the acute high-dose-rate findings from Hiroshima/Nagasaki towards acute and protracted lower exposures, which are more relevant for radiation protection issues. (orig.)

  14. Crystal structure of the plexin A3 intracellular region reveals an autoinhibited conformation through active site sequestration

    Energy Technology Data Exchange (ETDEWEB)

    He, Huawei; Yang, Taehong; Terman, Jonathan R.; Zhang, Xuewu; (UTSMC)

    2010-01-20

    Plexin cell surface receptors bind to semaphorin ligands and transduce signals for regulating neuronal axon guidance. The intracellular region of plexins is essential for signaling and contains a R-Ras/M-Ras GTPase activating protein (GAP) domain that is divided into two segments by a Rho GTPase-binding domain (RBD). The regulation mechanisms for plexin remain elusive, although it is known that activation requires both binding of semaphorin to the extracellular region and a Rho-family GTPase (Rac1 or Rnd1) to the RBD. Here we report the crystal structure of the plexin A3 intracellular region. The structure shows that the N- and C-terminal portions of the GAP homologous regions together form a GAP domain with an overall fold similar to other Ras GAPs. However, the plexin GAP domain adopts a closed conformation and cannot accommodate R-Ras/M-Ras in its substrate-binding site, providing a structural basis for the autoinhibited state of plexins. A comparison with the plexin B1 RBD/Rnd1 complex structure suggests that Rnd1 binding alone does not induce a conformational change in plexin, explaining the requirement of both semaphorin and a Rho GTPase for activation. The structure also identifies an N-terminal segment that is important for regulation. Both the N-terminal segment and the RBD make extensive interactions with the GAP domain, suggesting the presence of an allosteric network connecting these three domains that integrates semaphorin and Rho GTPase signals to activate the GAP. The importance of these interactions in plexin signaling is shown by both cell-based and in vivo axon guidance assays.

  15. The identity and distribution of Fiorinia phantasma (Cockerell & Robinson) (Hemiptera: Coccomorpha: Diaspididae), with a new synonym.

    Science.gov (United States)

    Watson, Gillian W; Williams, Douglas J; Miller, Douglass R

    2015-11-25

    The morphologies of Fiorinia phantasma (Cockerell & Robinson) (Hemiptera: Coccomorpha: Diaspididae) and F. coronata Williams & Watson are reviewed, and the name F. coronata is placed as a junior synonym of the name F. phantasma syn. n. The known geographical distribution and host range of F. phantasma is documented and discussed. An identification key to 12 of the 16 species of Fiorinia known from the Australasian, Nearctic and Neotropical Regions is provided.

  16. SEISMIC SITE RESPONSE ESTIMATION IN THE NEAR SOURCE REGION OF THE 2009 L’AQUILA, ITALY, EARTHQUAKE

    Science.gov (United States)

    Bertrand, E.; Azzara, R.; Bergamashi, F.; Bordoni, P.; Cara, F.; Cogliano, R.; Cultrera, G.; di Giulio, G.; Duval, A.; Fodarella, A.; Milana, G.; Pucillo, S.; Régnier, J.; Riccio, G.; Salichon, J.

    2009-12-01

    The 6th of April 2009, at 3:32 local time, a Mw 6.3 earthquake hit the Abruzzo region (central Italy) causing more than 300 casualties. The epicenter of the earthquake was 95km NE of Rome and 10km from the center of the city of L’Aquila, the administrative capital of the Abruzzo region. This city has a population of about 70,000 and was severely damaged by the earthquake, the total cost of the buildings damage being estimated around 3 Bn €. Historical masonry buildings particularly suffered from the seismic shaking, but some reinforced concrete structures from more modern construction were also heavily damaged. To better estimate the seismic solicitation of these structures during the earthquake, we deployed temporary arrays in the near source region. Downtown L’Aquila, as well as a rural quarter composed of ancient dwelling-centers located western L’Aquila (Roio area), have been instrumented. The array set up downtown consisted of nearly 25 stations including velocimetric and accelerometric sensors. In the Roio area, 6 stations operated for almost one month. The data has been processed in order to study the spectral ratios of the horizontal component of ground motion at the soil site and at a reference site, as well as the spectral ratio of the horizontal and the vertical movement at a single recording site. Downtown L’Aquila is set on a Quaternary fluvial terrace (breccias with limestone boulders and clasts in a marly matrix), which forms the left bank of the Aterno River and slopes down in the southwest direction towards the Aterno River. The alluvial are lying on lacustrine sediments reaching their maximum thickness (about 250m) in the center of L’Aquila. After De Luca et al. (2005), these quaternary deposits seem to lead in an important amplification factor in the low frequency range (0.5-0.6 Hz). However, the level of amplification varies strongly from one point to the other in the center of the city. This new experimentation allows new and more

  17. Investigating the Influence of Regional Stress on Fault and Fracture Permeability at Pahute Mesa, Nevada National Security Site

    Energy Technology Data Exchange (ETDEWEB)

    Reeves, Donald M. [Desert Research Inst. (DRI), Reno, NV (United States); Smith, Kenneth D. [Univ. of Nevada, Reno, NV (United States); Parashar, Rishi [Desert Research Inst. (DRI), Reno, NV (United States); Collins, Cheryl [Desert Research Inst. (DRI), Las Vegas, NV (United States); Heintz, Kevin M. [Desert Research Inst. (DRI), Las Vegas, NV (United States)

    2017-05-24

    Regional stress may exert considerable control on the permeability and hydraulic function (i.e., barrier to and/or conduit for fluid flow) of faults and fractures at Pahute Mesa, Nevada National Security Site (NNSS). In-situ measurements of the stress field are sparse in this area, and short period earthquake focal mechanisms are used to delineate principal horizontal stress orientations. Stress field inversion solutions to earthquake focal mechanisms indicate that Pahute Mesa is located within a transtensional faulting regime, represented by oblique slip on steeply dipping normal fault structures, with maximum horizontal stress ranging from N29°E to N63°E and average of N42°E. Average horizontal stress directions are in general agreement with large diameter borehole breakouts from Pahute Mesa analyzed in this study and with stress measurements from other locations on the NNSS.

  18. Groundwater flow modelling in the region of the repository site of the radioactive wastes from Goiania accident-Brazil

    International Nuclear Information System (INIS)

    Aquino Branco, Otavio Eurico de; Carvalho Filho, Carlos Alberto

    1996-08-01

    The radioactive wastes from Goiania's accident, with be deposited at the repository site of Abadia de Goias, located 20 km away from the city of Goiania. This paper presents a groundwater flow in confined or unconfined, heterogeneous and anisotropic porous media with variable layer thicknesses. The necessary parameters to simulate the flow were taken from technical reports and from specific studies about the region. The geological and hydrogeological studies evidence that in this area there is one aquifer type water table. The permeability coefficient evaluated for aquifer formation was 1.88x10 -4 cm/s and for the porosity 0.47. The average annual rate of recharge was evaluated in 0.22 m. The potentiometric map generated using the MODFLOW code showed a good a agreement between the hydraulic head simulated and that measured in the field. (author)

  19. Bioclim Deliverable D6a: regional climatic characteristics for the European sites at specific times: the dynamical down-scaling

    International Nuclear Information System (INIS)

    2003-01-01

    The overall aim of BIOCLIM is to assess the possible long-term impacts due to climate change on the safety of radioactive waste repositories in deep formations. This aim is addressed through the following specific objectives: - Development of practical and innovative strategies for representing sequential climatic changes to the geosphere-biosphere system for existing sites over central Europe, addressing the timescale of one million years, which is relevant to the geological disposal of radioactive waste. - Exploration and evaluation of the potential effects of climate change on the nature of the biosphere systems used to assess the environmental impact. - Dissemination of information on the new methodologies and the results obtained from the project among the international waste management community for use in performance assessments of potential or planned radioactive waste repositories. The BIOCLIM project is designed to advance the state-of-the-art of biosphere modelling for use in Performance Assessments. Therefore, two strategies are developed for representing sequential climatic changes to geosphere-biosphere systems. The hierarchical strategy successively uses a hierarchy of climate models. These models vary from simple 2-D models, which simulate interactions between a few aspects of the Earth system at a rough surface resolution, through General Circulation Model (GCM) and vegetation model, which simulate in great detail the dynamics and physics of the atmosphere, ocean and biosphere, to regional models, which focus on the European regions and sites of interest. Moreover, rule-based and statistical down-scaling procedures are also considered. Comparisons are provided in terms of climate and vegetation cover at the selected times and for the study regions. The integrated strategy consists of using integrated climate models, representing all the physical mechanisms important for long-term continuous climate variations, to simulate the climate evolution over

  20. Embedded regional/Local-scale model of natural transients in saline groundwater flow. Illustrated using the Beberg Site

    International Nuclear Information System (INIS)

    Marsic, Niko; Hartley, Lee; Sanchez-Friera, Paula; Morvik, Arnfinn

    2002-04-01

    The main focus of this report is to develop and test a methodology for performing large simulations of transient variable density flow. Several developments were made to NAMMU to enable such calculations. The following lists the findings of this study: 1) Feasibility: it is numerically feasible to construct large (0.5 million elements) embedded models of transient variable density flow with a relatively fine mesh (about 35m) of the site-scale. 2) Stochastic simulation: performing stochastic realisations of long transients is just possible, although the requirements on CPU and disk to store the results for 100 realisations, say, would be significant. As an indication, about 19 realisations of the current model could be run on a Sun Enterprise 450 (4 x UltraSPARC-II 400MHz) computer in one week if all four processors are fully utilised. 3) Embedded grid: the nesting of a refined site-scale model (35m elements) within a coarser (100m) regional-scale mesh for variable density flow was tested successfully. It was found that grading the refinement around the site-scale to avoid a large step change in element size was beneficial for convergence and stability. This may be less of an issue if a more sophisticated pre conditioner was used. 4) Solver: the most efficient and stable scheme was obtained by decoupling the flow and transport equation at each time-step. GMRES (Generalised Minimum Residual) was the most robust conjugate gradient method for this problem. 5) Boundary conditions: a set of relatively complex non-linear boundary conditions had to be applied for both pressure and salinity on the top and vertical boundaries to give the system sufficient freedom to approximate realistic conditions over a large area and long times. It was important that both flow and a flux of salinity could cross each boundary, and that the direction and magnitude could evolve in time. 6) Calibration on salinity: model predictions of the salinity in the deep boreholes were used to calibrate

  1. High-Affinity Interaction of the K-Ras4B Hypervariable Region with the Ras Active Site

    Science.gov (United States)

    Chavan, Tanmay S.; Jang, Hyunbum; Khavrutskii, Lyuba; Abraham, Sherwin J.; Banerjee, Avik; Freed, Benjamin C.; Johannessen, Liv; Tarasov, Sergey G.; Gaponenko, Vadim; Nussinov, Ruth; Tarasova, Nadya I.

    2015-01-01

    Ras proteins are small GTPases that act as signal transducers between cell surface receptors and several intracellular signaling cascades. They contain highly homologous catalytic domains and flexible C-terminal hypervariable regions (HVRs) that differ across Ras isoforms. KRAS is among the most frequently mutated oncogenes in human tumors. Surprisingly, we found that the C-terminal HVR of K-Ras4B, thought to minimally impact the catalytic domain, directly interacts with the active site of the protein. The interaction is almost 100-fold tighter with the GDP-bound than the GTP-bound protein. HVR binding interferes with Ras-Raf interaction, modulates binding to phospholipids, and slightly slows down nucleotide exchange. The data indicate that contrary to previously suggested models of K-Ras4B signaling, HVR plays essential roles in regulation of signaling. High affinity binding of short peptide analogs of HVR to K-Ras active site suggests that targeting this surface with inhibitory synthetic molecules for the therapy of KRAS-dependent tumors is feasible. PMID:26682817

  2. The birthweight toll of mining pollution: evidence from the most contaminated mine site in the Andean region.

    Science.gov (United States)

    Arrieta, A; Guillen, J

    2018-04-26

    To assess the effect of mining pollution on birthweight. A retrospective before-and-after study with an untreated comparison group. La Oroya, a mining town in the Peruvian Andes, considered the most contaminated town in the Andean region. All pregnant women who delivered in the social security healthcare system in years 2005, 2006, 2008 and 2009. A total of 214 983 births records were used, 957 from La Oroya and 214 026 from the rest of the country. A difference-in-difference estimation is used to assess the effect of mining pollution on birthweight before and after two business policy changes: a partial environmental improvement and a subsequent closure of smelter operations in La Oroya. Birthweight was compared with a group not affected by the environmental changes in La Oroya. Birthweight in grams. A steep reduction in mining pollution due to the closure of smelter operations in La Oroya showed an increased birthweight of 71.6 g after controlling for socio-economic and medical characteristics. None of the environmental improvements prior to the closure had a statistically significant effect on birthweight. Mining pollution in La Oroya had a negative impact on birthweight. Partial environmental improvements were not enough to improve birthweight. Only after the closure of all mining and smelter operations in La Oroya was a significant gain in birthweight shown. The closure of the most contaminated mine site in the Andean region increased birthweight by 72 g. © 2018 Royal College of Obstetricians and Gynaecologists.

  3. Preliminary evaluation of techniques for transforming regional climate model output to the potential repository site in support of Yucca Mountain future climate synthesis

    International Nuclear Information System (INIS)

    Church, H.W.; Zak, B.D.; Behl, Y.K.

    1995-06-01

    The report describes a preliminary evaluation of models for transforming regional climate model output from a regional to a local scale for the Yucca Mountain area. Evaluation and analysis of both empirical and numerical modeling are discussed which is aimed at providing site-specific, climate-based information for use by interfacing activities. Two semiempirical approaches are recommended for further analysis

  4. Comparison between seismic and domestic risk in moderate seismic hazard prone region: the Grenoble City (France test site

    Directory of Open Access Journals (Sweden)

    F. Dunand

    2012-02-01

    Full Text Available France has a moderate level of seismic activity, characterized by diffuse seismicity, sometimes experiencing earthquakes of a magnitude of more than 5 in the most active zones. In this seismicity context, Grenoble is a city of major economic and social importance. However, earthquakes being rare, public authorities and the decision makers are only vaguely committed to reducing seismic risk: return periods are long and local policy makers do not have much information available. Over the past 25 yr, a large number of studies have been conducted to improve our knowledge of seismic hazard in this region. One of the decision-making concerns of Grenoble's public authorities, as managers of a large number of public buildings, is to know not only the seismic-prone regions, the variability of seismic hazard due to site effects and the city's overall vulnerability, but also the level of seismic risk and exposure for the entire city, also compared to other natural or/and domestic hazards. Our seismic risk analysis uses a probabilistic approach for regional and local hazards and the vulnerability assessment of buildings. Its applicability to Grenoble offers the advantage of being based on knowledge acquired by previous projects conducted over the years. This paper aims to compare the level of seismic risk with that of other risks and to introduce the notion of risk acceptability in order to offer guidance in the management of seismic risk. This notion of acceptability, which is now part of seismic risk consideration for existing buildings in Switzerland, is relevant in moderately seismic-prone countries like France.

  5. Evaluation of the Tindouf Basin Region in Southern Morocco as an Analog Site for Soil Geochemistry on Noachian Mars.

    Science.gov (United States)

    Oberlin, Elizabeth A; Claire, Mark W; Kounaves, Samuel P

    2018-02-09

    Locations on Earth that provide insights into processes that may be occurring or may have occurred throughout martian history are often broadly deemed "Mars analog environments." As no single locale can precisely represent a past or present martian environment, it is important to focus on characterization of terrestrial processes that produce analogous features to those observed in specific regions of Mars or, if possible, specific time periods during martian history. Here, we report on the preservation of ionic species in soil samples collected from the Tindouf region of Morocco and compare them with the McMurdo Dry Valleys of Antarctica, the Atacama Desert in Chile, the martian meteorite EETA79001, and the in situ Mars analyses from the Phoenix Wet Chemistry Laboratory (WCL). The Moroccan samples show the greatest similarity with those from Victoria Valley, Beacon Valley, and the Atacama, while being consistently depleted compared to University Valley and enriched compared to Taylor Valley. The NO 3 /Cl ratios are most similar to Victoria Valley and Atacama, while the SO 4 /Cl ratios are similar to those from Beacon Valley, Victoria Valley, and the Atacama. While perchlorate concentrations in the Moroccan samples are typically lower than those found in samples of other analog sites, conditions in the region are sufficiently arid to retain oxychlorines at detectable levels. Our results suggest that the Tindouf Basin in Morocco can serve as a suitable analogue for the soil geochemistry and subsequent aridification of the Noachian epoch on Mars. Key Words: Mars analogues-Antarctica-Morocco-Oxyanions-Perchlorate-Nitrate. Astrobiology 18, xxx-xxx.

  6. Investigation of carbonyl compound sources at a rural site in the Yangtze River Delta region of China.

    Science.gov (United States)

    Wang, Ming; Chen, Wentai; Shao, Min; Lu, Sihua; Zeng, Limin; Hu, Min

    2015-02-01

    Carbonyl compounds are important intermediates in atmospheric photochemistry, but their primary sources are still not understood well. In this work, carbonyls, hydrocarbons, and alkyl nitrates were continuously measured during November 2011 at a rural site in the Yangtze River Delta region of China. Mixing ratios of carbonyls and hydrocarbons showed large fluctuations during the entire measurement. The average level for total measured volatile organic compounds during the pollution episode from 25th to 27th November, 2011 was 91.6 ppb, about 7 times the value for the clean period of 7th-8th, November, 2011. To preliminarily identify toluene sources at this site, the emission ratio of toluene to benzene (T/B) during the pollution episode was determined based on photochemical ages derived from the relationship of alkyl nitrates to their parent alkanes. The calculated T/B was 5.8 ppb/ppb, significantly higher than the values of 0.2-1.7 ppb/ppb for vehicular exhaust and other combustion sources, indicating the dominant influence of industrial emissions on ambient toluene. The contributions of industrial sources to ambient carbonyls were then calculated using a multiple linear regression fit model that used toluene and alkyl nitrates as respective tracers for industrial emission and secondary production. During the pollution episode, 18.5%, 69.0%, and 52.9% of measured formaldehyde, acetaldehyde, and acetone were considered to be attributable to industrial emissions. The emission ratios relative to toluene for formaldehyde, acetaldehyde, and acetone were determined to be 0.10, 0.20 and 0.40 ppb/ppb, respectively. More research on industrial carbonyl emission characteristics is needed to understand carbonyl sources better. Copyright © 2014. Published by Elsevier B.V.

  7. Atmospheric reactive nitrogen concentrations at ten sites with contrasting land use in an arid region of central Asia

    Directory of Open Access Journals (Sweden)

    K. H. Li

    2012-10-01

    Full Text Available Atmospheric concentrations of reactive nitrogen (Nr species from 2009 to 2011 are reported for ten sites in Xinjiang, China, an arid region of central Asia. Concentrations of NH3, NO2, particulate ammonium and nitrate (pNH4+ and pNO3 showed large spatial and seasonal variation and averaged 7.71, 9.68, 1.81 and 1.13 μg N m−3, and PM10 concentrations averaged 249.2 μg m−3 across all sites. Lower NH3 concentrations and higher NO2, pNH4+ and pNO3 concentrations were found in winter, reflecting serious air pollution due to domestic heating in winter and other anthropogenic sources such as increased emissions from motor traffic and industry. The increasing order of total concentrations of Nr species was alpine grassland; desert, desert-oasis ecotone; desert in an oasis; farmland; suburban and urban ecosystems. Lower ratios of secondary particles (NH4+ and NO3 were found in the desert and desert-oasis ecotone, while urban and suburban areas had higher ratios, which implied that anthropogenic activities have greatly influenced local air quality and must be controlled.

  8. Examination of Regional Trends in Cloud Properties over Surface Sites Derived from MODIS and AVHRR using the CERES Cloud Algorithm

    Science.gov (United States)

    Smith, W. L., Jr.; Minnis, P.; Bedka, K. M.; Sun-Mack, S.; Chen, Y.; Doelling, D. R.; Kato, S.; Rutan, D. A.

    2017-12-01

    Recent studies analyzing long-term measurements of surface insolation at ground sites suggest that decadal-scale trends of increasing (brightening) and decreasing (dimming) downward solar flux have occurred at various times over the last century. Regional variations have been reported that range from near 0 Wm-2/decade to as large as 9 Wm-2/decade depending on the location and time period analyzed. The more significant trends have been attributed to changes in overhead clouds and aerosols, although quantifying their relative impacts using independent observations has been difficult, owing in part to a lack of consistent long-term measurements of cloud properties. This paper examines new satellite based records of cloud properties derived from MODIS (2000-present) and AVHRR (1981- present) data to infer cloud property trends over a number of surface radiation sites across the globe. The MODIS cloud algorithm was developed for the NASA Clouds and the Earth's Radiant Energy System (CERES) project to provide a consistent record of cloud properties to help improve broadband radiation measurements and to better understand cloud radiative effects. The CERES-MODIS cloud algorithm has been modified to analyze other satellites including the AVHRR on the NOAA satellites. Compared to MODIS, obtaining consistent cloud properties over a long period from AVHRR is a much more significant challenge owing to the number of different satellites, instrument calibration uncertainties, orbital drift and other factors. Nevertheless, both the MODIS and AVHRR cloud properties will be analyzed to determine trends, and their level of consistency and correspondence with surface radiation trends derived from the ground-based radiometer data. It is anticipated that this initial study will contribute to an improved understanding of surface solar radiation trends and their relationship to clouds.

  9. Pharmacokinetics, pharmacodynamics and local tolerance at injection site of marbofloxacin administered by regional intravenous limb perfusion in standing horses.

    Science.gov (United States)

    Lallemand, Elodie; Trencart, Pierre; Tahier, Carine; Dron, Frederic; Paulin, Angelique; Tessier, Caroline

    2013-08-01

    To evaluate pharmacokinetic-pharmacodynamic variables and local tolerance at injection-site of marbofloxacin administered via regional intravenous limb perfusion (RIVLP) in standing horses. Adult horses (n = 6). RIVLP were performed with rubber tourniquets applied to the forelimbs of standing sedated horses. Marbofloxacin (0.67 mg/kg) was randomly injected in 1 forelimb, with the contralateral limb serving as a control (0.9% NaCl solution). Samples of jugular blood and synovial fluid from the radiocarpal joint of the marbofloxacin-perfused limb were collected before and at intervals after RIVLP for determination of drug concentrations. All injection sites were evaluated before, 24 and 48 hours after RIVLP by means of ultrasonographic examination, circumferential measurements and subjective visible inflammation scores by veterinarians unaware of treatment received. No adverse effects associated with the technique or antibiotic were observed. High marbofloxacin concentrations were obtained in the synovial fluid, AUCINF was significantly higher in synovial fluid than in plasma (78.64 ± 49.41 and 2.85 ± 0.60 µg h/mL respectively, P = .028). The efficacy indices, AUC0-24 /MIC90 and Cmaxobs/MIC90 , predicted a favorable outcome in the treatment of synovial fluid infections caused by enterobacteriaceae and Staphylococcus aureus. After RIVLP, there was no statistically significant difference between marbofloxacin-injected and control limbs for lameness, visual inflammation score, limb circumference, and ultrasonographic appearance of the veins. Marbofloxacin injected limbs had a significantly greater subcutaneous thickness, compared with control limbs. These data suggest that RIVLP of marbofloxacin (0.67 mg/kg) could be a safe and effective method for treatment of infections of the distal portion of the limb for susceptible organisms. © Copyright 2013 by The American College of Veterinary Surgeons.

  10. Regional groundwater flow and tritium transport modeling and risk assessment of the underground test area, Nevada Test Site, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    None

    1997-10-01

    The groundwater flow system of the Nevada Test Site and surrounding region was evaluated to estimate the highest potential current and near-term risk to the public and the environment from groundwater contamination downgradient of the underground nuclear testing areas. The highest, or greatest, potential risk is estimated by assuming that several unusually rapid transport pathways as well as public and environmental exposures all occur simultaneously. These conservative assumptions may cause risks to be significantly overestimated. However, such a deliberate, conservative approach ensures that public health and environmental risks are not underestimated and allows prioritization of future work to minimize potential risks. Historical underground nuclear testing activities, particularly detonations near or below the water table, have contaminated groundwater near testing locations with radioactive and nonradioactive constituents. Tritium was selected as the contaminant of primary concern for this phase of the project because it is abundant, highly mobile, and represents the most significant contributor to the potential radiation dose to humans for the short term. It was also assumed that the predicted risk to human health and the environment from tritium exposure would reasonably represent the risk from other, less mobile radionuclides within the same time frame. Other contaminants will be investigated at a later date. Existing and newly collected hydrogeologic data were compiled for a large area of southern Nevada and California, encompassing the Nevada Test Site regional groundwater flow system. These data were used to develop numerical groundwater flow and tritium transport models for use in the prediction of tritium concentrations at hypothetical human and ecological receptor locations for a 200-year time frame. A numerical, steady-state regional groundwater flow model was developed to serve as the basis for the prediction of the movement of tritium from the

  11. Site Features

    Data.gov (United States)

    U.S. Environmental Protection Agency — This dataset consists of various site features from multiple Superfund sites in U.S. EPA Region 8. These data were acquired from multiple sources at different times...

  12. Influence of region and site-specific factors on the degree of general validity of ecological and primary-energy-related assessments of biogas

    International Nuclear Information System (INIS)

    Dressler, Daniela

    2015-01-01

    As described in this publication, since the early 1990s numerous studies based on the life cycle assessment methodology have been dedicated to assessments of different kinds of bioenergy in comparison with fossil energy resources in terms of their energy balance and environmental impact. On reviewing the results of these studies one finds a strikingly wide range of variation. One major factor of influence on the results of life cycle assessments, besides methodological factors such as the choice of allocation method, is the representativeness of the data used. Thus, widely varying results are also obtained when balance calculations and assessments are performed on energy crops with due consideration to regional and site-specific factors. To address this problem the present study endeavoured to identify region and site-specific factors and assess them in terms of their influence on the life cycle assessment of the cultivation and conversion to biogas of different kinds of energy crops. For this purpose the following questions were explored: What influence do region, site and equipment-specific factors have on the results of ecological and primary-energy-related assessments; and how large are the differences in results between region and site-specific assessments on the one hand and assessments based on general assumptions on the other? It transpires that the results of region and site-specific assessments differ from one another in terms of both the assessment of energy cropping and the assessment of the entire process chain of biogas production and conversion to electricity.

  13. Different papillomaviruses have different repertoires of transcription factor binding sites: convergence and divergence in the upstream regulatory region

    Directory of Open Access Journals (Sweden)

    Alonso Ángel

    2006-03-01

    Full Text Available Abstract Background Papillomaviruses (PVs infect stratified squamous epithelia in warm-blooded vertebrates and have undergone a complex evolutionary process. The control of the expression of the early ORFs in PVs depends on the binding of cellular and viral transcription factors to the upstream regulatory region (URR of the virus. It is believed that there is a core of transcription factor binding sites (TFBS common to all PVs, with additional individual differences, although most of the available information focuses only on a handful of viruses. Results We have studied the URR of sixty-one PVs, covering twenty different hosts. We have predicted the TFBS present in the URR and analysed these results by principal component analysis and genetic algorithms. The number and nature of TFBS in the URR might be much broader than thus far described, and different PVs have different repertoires of TFBS. Conclusion There are common fingerprints in the URR in PVs that infect primates, although the ancestors of these viruses diverged a long time ago. Additionally, there are obvious differences between the URR of alpha and beta PVs, despite these PVs infect similar histological cell types in the same host, i.e. human. A thorough analysis of the TFBS in the URR might provide crucial information about the differential biology of cancer-associated PVs.

  14. Estimating Emissions of Toxic Hydrocarbons from Natural Gas Production Sites in the Barnett Shale Region of Northern Texas.

    Science.gov (United States)

    Marrero, Josette E; Townsend-Small, Amy; Lyon, David R; Tsai, Tracy R; Meinardi, Simone; Blake, Donald R

    2016-10-04

    Oil and natural gas operations have continued to expand and move closer to densely populated areas, contributing to growing public concerns regarding exposure to hazardous air pollutants. During the Barnett Shale Coordinated Campaign in October, 2013, ground-based whole air samples collected downwind of oil and gas sites revealed enhancements in several potentially toxic volatile organic compounds (VOCs) when compared to background values. Molar emissions ratios relative to methane were determined for hexane, benzene, toluene, ethylbenzene, and xylene (BTEX compounds). Using methane leak rates measured from the Picarro mobile flux plane (MFP) system and a Barnett Shale regional methane emissions inventory, the rates of emission of these toxic gases were calculated. Benzene emissions ranged between 51 ± 4 and 60 ± 4 kg h -1 . Hexane, the most abundantly emitted pollutant, ranged from 642 ± 45 to 1070 ± 340 kg h -1 . While observed hydrocarbon enhancements fall below federal workplace standards, results may indicate a link between emissions from oil and natural gas operations and concerns about exposure to hazardous air pollutants. The larger public health risks associated with the production and distribution of natural gas are of particular importance and warrant further investigation, particularly as the use of natural gas increases in the United States and internationally.

  15. The importance of species name synonyms in literature searches

    Science.gov (United States)

    Guala, Gerald

    2016-01-01

    The synonyms of biological species names are shown to be an important component in comprehensive searches of electronic scientific literature databases but they are not well leveraged within the major literature databases examined. For accepted or valid species names in the Integrated Taxonomic Information System (ITIS) which have synonyms in the system, and which are found in citations within PLoS, PMC, PubMed or Scopus, both the percentage of species for which citations will not be found if synonyms are not used, and the percentage increase in number of citations found by including synonyms are very often substantial. However, there is no correlation between the number of synonyms per species and the magnitude of the effect. Further, the number of citations found does not generally increase proportionally to the number of synonyms available. Users looking for literature on specific species across all of the resources investigated here are often missing large numbers of citations if they are not manually augmenting their searches with synonyms. Of course, missing citations can have serious consequences by effectively hiding critical information. Literature searches should include synonym relationships and a new web service in ITIS, with examples of how to apply it to this issue, was developed as a result of this study, and is here announced, to aide in this.

  16. Antonyms and Synonyms: Cognitive Aspects of Negation in Positive Sentences

    OpenAIRE

    Arimitsu, Nami

    2017-01-01

    This paper investigates the cognitive orientation of the negative meaning in antonyms and synonyms. While the negative meaning in antonyms is a reflection of the cognitive mapping of our mental contiguity, the negative images in synonymous words are more closely associated with aspects of subjective semantics and factors related to politeness

  17. The Importance of Species Name Synonyms in Literature Searches.

    Science.gov (United States)

    Guala, Gerald F

    2016-01-01

    The synonyms of biological species names are shown to be an important component in comprehensive searches of electronic scientific literature databases but they are not well leveraged within the major literature databases examined. For accepted or valid species names in the Integrated Taxonomic Information System (ITIS) which have synonyms in the system, and which are found in citations within PLoS, PMC, PubMed or Scopus, both the percentage of species for which citations will not be found if synonyms are not used, and the percentage increase in number of citations found by including synonyms are very often substantial. However, there is no correlation between the number of synonyms per species and the magnitude of the effect. Further, the number of citations found does not generally increase proportionally to the number of synonyms available. Users looking for literature on specific species across all of the resources investigated here are often missing large numbers of citations if they are not manually augmenting their searches with synonyms. Of course, missing citations can have serious consequences by effectively hiding critical information. Literature searches should include synonym relationships and a new web service in ITIS, with examples of how to apply it to this issue, was developed as a result of this study, and is here announced, to aide in this.

  18. The Importance of Species Name Synonyms in Literature Searches.

    Directory of Open Access Journals (Sweden)

    Gerald F Guala

    Full Text Available The synonyms of biological species names are shown to be an important component in comprehensive searches of electronic scientific literature databases but they are not well leveraged within the major literature databases examined. For accepted or valid species names in the Integrated Taxonomic Information System (ITIS which have synonyms in the system, and which are found in citations within PLoS, PMC, PubMed or Scopus, both the percentage of species for which citations will not be found if synonyms are not used, and the percentage increase in number of citations found by including synonyms are very often substantial. However, there is no correlation between the number of synonyms per species and the magnitude of the effect. Further, the number of citations found does not generally increase proportionally to the number of synonyms available. Users looking for literature on specific species across all of the resources investigated here are often missing large numbers of citations if they are not manually augmenting their searches with synonyms. Of course, missing citations can have serious consequences by effectively hiding critical information. Literature searches should include synonym relationships and a new web service in ITIS, with examples of how to apply it to this issue, was developed as a result of this study, and is here announced, to aide in this.

  19. Superfund record of decision (EPA Region 3): Southern Maryland Wood Treating Site, Hollywood, MD, September 8, 1995

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-09-01

    The decision document presents the selected remedial action for the Southern Maryland Wood Treating Site (`the Site`), in Hollywood, Maryland. This is the second and final phase of remedial action for the Site. This phase addresses soil and sediment contamination and non-aqueous phase liquids (`NAPLs`) which are the principal threats remaining at the Site and are a source of contamination to the ground water and surface water.

  20. Adaptive synonymous mutations in an experimentally evolved Pseudomonas fluorescens population

    DEFF Research Database (Denmark)

    Bailey, Susan; Hinz, Aaron; Kassen, Rees

    2014-01-01

    Conventional wisdom holds that synonymous mutations, nucleotide changes that do not alter the encoded amino acid, have no detectable effect on phenotype or fitness. However, a growing body of evidence from both comparative and experimental studies suggests otherwise. Synonymous mutations have been...... shown to impact gene expression, protein folding and fitness, however, direct evidence that they can be positively selected, and so contribute to adaptation, is lacking. Here we report the recovery of two beneficial synonymous single base pair changes that arose spontaneously and independently...... in an experimentally evolved population of Pseudomonas fluorescens. We show experimentally that these mutations increase fitness by an amount comparable to non-synonymous mutations and that the fitness increases stem from increased gene expression. These results provide unequivocal evidence that synonymous mutations...

  1. The use of the hypervariable P8 region of trnL(UAA intron for identification of orchid species: Evidence from restriction site polymorphism analysis.

    Directory of Open Access Journals (Sweden)

    Rajkumar Kishor

    Full Text Available The P8 stem-loop region of the trnL intron, which is known to be hypervariable in size with multiple repeat motifs and created difficulties in alignment, is always excluded in phylogenetic as well as barcode analyses. This region was investigated for species discrimination in 98 taxa of orchids belonging to the tribe Vandeae using in silico mapping of restriction site polymorphism. The length of the P8 regions varied from 200 nucleotides in Aerides rosea to 669 nucleotides in Dendrophylax sallei. Forty two taxa had unique lengths, while as many as eight shared a common length of 521 nucleotides. Of the 35 restriction endonucleases producing digestions in the P8 regions, three, viz., AgsI, ApoI and TspDTI turned out to have recognition sites across all the 98 taxa being studied. When their restriction data were combined, 92 taxa could be discriminated leaving three taxon pairs. However, Acampe papillosa and Aeranthes arachnites despite having similar restriction sites differed in their P8 lengths. This is the first report on thorough investigation of the P8 region of trnL intron for search of species specific restriction sites and hence its use as a potential plant DNA barcode.

  2. Evolutionary constraint and disease associations of post-translational modification sites in human genomes.

    Directory of Open Access Journals (Sweden)

    Jüri Reimand

    2015-01-01

    Full Text Available Interpreting the impact of human genome variation on phenotype is challenging. The functional effect of protein-coding variants is often predicted using sequence conservation and population frequency data, however other factors are likely relevant. We hypothesized that variants in protein post-translational modification (PTM sites contribute to phenotype variation and disease. We analyzed fraction of rare variants and non-synonymous to synonymous variant ratio (Ka/Ks in 7,500 human genomes and found a significant negative selection signal in PTM regions independent of six factors, including conservation, codon usage, and GC-content, that is widely distributed across tissue-specific genes and function classes. PTM regions are also enriched in known disease mutations, suggesting that PTM variation is more likely deleterious. PTM constraint also affects flanking sequence around modified residues and increases around clustered sites, indicating presence of functionally important short linear motifs. Using target site motifs of 124 kinases, we predict that at least ∼180,000 motif-breaker amino acid residues that disrupt PTM sites when substituted, and highlight kinase motifs that show specific negative selection and enrichment of disease mutations. We provide this dataset with corresponding hypothesized mechanisms as a community resource. As an example of our integrative approach, we propose that PTPN11 variants in Noonan syndrome aberrantly activate the protein by disrupting an uncharacterized cluster of phosphorylation sites. Further, as PTMs are molecular switches that are modulated by drugs, we study mutated binding sites of PTM enzymes in disease genes and define a drug-disease network containing 413 novel predicted disease-gene links.

  3. Multi-Site and Multi-Variables Statistical Downscaling Technique in the Monsoon Dominated Region of Pakistan

    Science.gov (United States)

    Khan, Firdos; Pilz, Jürgen

    2016-04-01

    South Asia is under the severe impacts of changing climate and global warming. The last two decades showed that climate change or global warming is happening and the first decade of 21st century is considered as the warmest decade over Pakistan ever in history where temperature reached 53 0C in 2010. Consequently, the spatio-temporal distribution and intensity of precipitation is badly effected and causes floods, cyclones and hurricanes in the region which further have impacts on agriculture, water, health etc. To cope with the situation, it is important to conduct impact assessment studies and take adaptation and mitigation remedies. For impact assessment studies, we need climate variables at higher resolution. Downscaling techniques are used to produce climate variables at higher resolution; these techniques are broadly divided into two types, statistical downscaling and dynamical downscaling. The target location of this study is the monsoon dominated region of Pakistan. One reason for choosing this area is because the contribution of monsoon rains in this area is more than 80 % of the total rainfall. This study evaluates a statistical downscaling technique which can be then used for downscaling climatic variables. Two statistical techniques i.e. quantile regression and copula modeling are combined in order to produce realistic results for climate variables in the area under-study. To reduce the dimension of input data and deal with multicollinearity problems, empirical orthogonal functions will be used. Advantages of this new method are: (1) it is more robust to outliers as compared to ordinary least squares estimates and other estimation methods based on central tendency and dispersion measures; (2) it preserves the dependence among variables and among sites and (3) it can be used to combine different types of distributions. This is important in our case because we are dealing with climatic variables having different distributions over different meteorological

  4. How well do regional or national Breeding Bird Survey data predict songbird population trends at an intact boreal site?

    Directory of Open Access Journals (Sweden)

    Craig S. Machtans

    2014-06-01

    Full Text Available A study to monitor boreal songbird trends was initiated in 1998 in a relatively undisturbed and remote part of the boreal forest in the Northwest Territories, Canada. Eight years of point count data were collected over the 14 years of the study, 1998-2011. Trends were estimated for 50 bird species using generalized linear mixed-effects models, with random effects to account for temporal (repeat sampling within years and spatial (stations within stands autocorrelation and variability associated with multiple observers. We tested whether regional and national Breeding Bird Survey (BBS trends could, on average, predict trends in our study area. Significant increases in our study area outnumbered decreases by 12 species to 6, an opposite pattern compared to Alberta (6 versus 15, respectively and Canada (9 versus 20. Twenty-two species with relatively precise trend estimates (precision to detect > 30% decline in 10 years; observed SE ≤ 3.7%/year showed nonsignificant trends, similar to Alberta (24 and Canada (20. Precision-weighted trends for a sample of 19 species with both reliable trends at our site and small portions of their range covered by BBS in Canada were, on average, more negative for Alberta (1.34% per year lower and for Canada (1.15% per year lower relative to Fort Liard, though 95% credible intervals still contained zero. We suggest that part of the differences could be attributable to local resource pulses (insect outbreak. However, we also suggest that the tendency for BBS route coverage to disproportionately sample more southerly, developed areas in the boreal forest could result in BBS trends that are not representative of range-wide trends for species whose range is centred farther north.

  5. Multi-criteria ranking and receptor modelling of airborne fine particles at three sites in the Pearl River Delta region of China.

    Science.gov (United States)

    Friend, Adrian J; Ayoko, Godwin A; Guo, Hai

    2011-01-15

    The multi-criteria decision making methods, Preference Ranking Organization METHods for Enrichment Evaluation (PROMETHEE) and Graphical Analysis for Interactive Assistance (GAIA), and the two-way Positive Matrix Factorization (PMF) receptor model were applied to airborne fine particle compositional data collected at three sites in Hong Kong during two monitoring campaigns held from November 2000 to October 2001 and November 2004 to October 2005. PROMETHEE/GAIA indicated that the three sites were worse during the later monitoring campaign, and that the order of the air quality at the sites during each campaign was: rural site>urban site>roadside site. The PMF analysis on the other hand, identified 6 common sources at all of the sites (diesel vehicle, fresh sea salt, secondary sulphate, soil, aged sea salt and oil combustion) which accounted for approximately 68.8±8.7% of the fine particle mass at the sites. In addition, road dust, gasoline vehicle, biomass burning, secondary nitrate, and metal processing were identified at some of the sites. Secondary sulphate was found to be the highest contributor to the fine particle mass at the rural and urban sites with vehicle emission as a high contributor to the roadside site. The PMF results are broadly similar to those obtained in a previous analysis by PCA/APCS. However, the PMF analysis resolved more factors at each site than the PCA/APCS. In addition, the study demonstrated that combined results from multi-criteria decision making analysis and receptor modelling can provide more detailed information that can be used to formulate the scientific basis for mitigating air pollution in the region. Copyright © 2010 Elsevier B.V. All rights reserved.

  6. Superfund Record of Decision (EPA Region 2): Ramapo Landfill Site, Rockland County, NY. (First remedial action), March 1992. Final report

    International Nuclear Information System (INIS)

    1992-01-01

    The 60-acre former landfill site is located on a 96-acre tract in the Town of Ramapo, Rockland County, New York, about 35 miles northwest of New York City. Utility corridors lie on three sides of the site, including high-voltage power transmission lines. The site is currently being used as a compaction and transfer facility by the Town of Ramapo. Trash and debris are weighed at a weigh station/guardhouse, compacted at a baler facility in the northeastern corner of the site, and transferred to the Al Turi Landfill in Goshen, New York. The ROD represents the entire remedial action for the site by controlling source of contamination and the generation of leachate, and treatment of contaminated ground water. The primary contaminants of concern affecting soil, ground water, and surface water are VOCs, including benzene; other organics; and metals, including arsenic, chromium, and lead. The selected remedial action for the site is included

  7. Investigations of groundwater system and simulation of regional groundwater flow for North Penn Area 7 Superfund site, Montgomery County, Pennsylvania

    Science.gov (United States)

    Senior, Lisa A.; Goode, Daniel J.

    2013-01-01

    Groundwater in the vicinity of several industrial facilities in Upper Gwynedd Township and vicinity, Montgomery County, in southeast Pennsylvania has been shown to be contaminated with volatile organic compounds (VOCs), the most common of which is the solvent trichloroethylene (TCE). The 2-square-mile area was placed on the National Priorities List as the North Penn Area 7 Superfund site by the U.S. Environmental Protection Agency (USEPA) in 1989. The U.S. Geological Survey (USGS) conducted geophysical logging, aquifer testing, and water-level monitoring, and measured streamflows in and near North Penn Area 7 from fall 2000 through fall 2006 in a technical assistance study for the USEPA to develop an understanding of the hydrogeologic framework in the area as part of the USEPA Remedial Investigation. In addition, the USGS developed a groundwater-flow computer model based on the hydrogeologic framework to simulate regional groundwater flow and to estimate directions of groundwater flow and pathways of groundwater contaminants. The study area is underlain by Triassic- and Jurassic-age sandstones and shales of the Lockatong Formation and Brunswick Group in the Mesozoic Newark Basin. Regionally, these rocks strike northeast and dip to the northwest. The sequence of rocks form a fractured-sedimentary-rock aquifer that acts as a set of confined to partially confined layers of differing permeabilities. Depth to competent bedrock typically is less than 20 ft below land surface. The aquifer layers are recharged locally by precipitation and discharge locally to streams. The general configuration of the potentiometric surface in the aquifer is similar to topography, except in areas affected by pumping. The headwaters of Wissahickon Creek are nearby, and the stream flows southwest, parallel to strike, to bisect North Penn Area 7. Groundwater is pumped in the vicinity of North Penn Area 7 for industrial use, public supply, and residential supply. Results of field investigations

  8. Chemical mass balance source apportionment of PM10 and TSP in residential and industrial sites of an urban region of Kolkata, India.

    Science.gov (United States)

    Gupta, A K; Karar, Kakoli; Srivastava, Anjali

    2007-04-02

    Daily average PM(10) (particulate matter which passes through a size selective impactor inlet with a 50% efficiency cut-off at 10 microm aerodynamic diameter), TSP (total suspended particulate matter) and their chemical species mass concentrations were measured at residential and industrial sites of an urban region of Kolkata during November 2003-November 2004. Source apportionment using chemical mass balance model revealed that the most dominant source throughout the study period at residential site was coal combustion (42%), while vehicular emission (47%) dominates at industrial site to PM(10). Paved road, field burning and wood combustion contributed 21%, 7% and 1% at residential site, while coal combustion, metal industry and soil dust contributed 34%, 1% and 1% at industrial site, respectively, to PM(10) during the study period. The contributors to TSP included coal combustion (37%), soil dust (19%), road dust (17%) and diesel combustion (15%) at residential site, while soil dust (36%), coal combustion (17%), solid waste (17%), road dust (16%) and tyre wear (7%) at industrial site. Significant seasonal variations of the particulate matters have been observed during the study period. In the monitoring sites total carbon, organic carbon and iron were found to be the marker species of road dust, while organic carbon, total carbon, chloride and sulfate have been observed as the marker species of soil dust in TSP.

  9. Differences between high-affinity forskolin binding sites in dopamine-riche and other regions of rat brain

    International Nuclear Information System (INIS)

    Poat, J.A.; Cripps, H.E.; Iversen, L.L.

    1988-01-01

    Forskolin labelled with [ 3 H] bound to high- and low-affinity sites in the rat brain. The high-affinity site was discretely located, with highest densities in the striatum, nucleus accumbens, olfactory tubercule, substantia nigra, hippocampus, and the molecular layers of the cerebellum. This site did not correlate well with the distribution of adenylate cyclase. The high-affinity striatal binding site may be associated with a stimulatory guanine nucleotide-binding protein. Thus, the number of sites was increased by the addition of Mg 2+ and guanylyl imidodiphosphate. Cholera toxin stereotaxically injected into rat striatum increased the number of binding sites, and no further increase was noted following the subsequent addition of guanyl nucleotide. High-affinity forskolin binding sites in non-dopamine-rich brain areas (hippocampus and cerebullum) were modulated in a qualitatively different manner by guanyl nucleotides. In these areas the number of binding sites was significantly reduced by the addition of guanyl nucleotide. These results suggest that forskolin may have a potential role in identifying different functional/structural guanine nucleotide-binding proteins

  10. Determination of Environmental Radiation and Radioactivity Levels at a Coal Fired Power Plant Site in Paiton Region

    International Nuclear Information System (INIS)

    Sutarman; Nareh, Marzaini; Warsona, Asep; Emlinarni; Buchari, R.

    2003-01-01

    Determination of environmental radiation and radioactivity levels at a coal fired power plant (CFPP) site in Paiton region, Probolinggo (East Java) has been carried out. The objective of this study is to calculate the distribution of natural radionuclide concentrations in the various environmental. The study area covered the area in radius of 10 km from a stack of CFPP. Measurement of concentration 2 28Th, 2 26Ra, and 4 0K in the various environmental samples were carried out using the gamma spectrometer with a detector of semiconductor HP-Ge. Measurement of concentration 1 4C and gross alpha in air has been carried out using the liquid scintillation counting and low background counting α/β system respectively. Measurement of gamma radiation has been carried out directly using the ionization chamber. The result of measurement show that highest concentration in soil was (80.81±0.39) Bq/kg for 2 28Th, (74.43±0.65) Bq/kg for 2 26Ra, and (520.43±5.36) Bq/kg for 4 0K. the highest concentration in water was (37.20±0.75) mBq/L for 2 28Th, undetectable for 2 26Ra, and (90.82±1.74) mBq/L for 4 0K. the highest concentration in grass/agriculture product was (0.98±0.05) Bq/kg wet for 2 28Th, (0.75±0.05) Bq/kg wet for 2 26Ra, and (34.53±0.01) Bq/kg wet for 4 0K. the highest concentration 1 4C and gross alpha in air was (11.9±1.9)x10 -3 Bq/m 3 and (3.59±1.89) Bq/m 3 , and the highest dose rate was (9.55±0.13) μR/h. The measurement values obtained are all below the maximum permissible concentration and dose limits in environment

  11. Insights on organic aerosol aging and the influence of coal combustion at a regional receptor site of central eastern China

    Directory of Open Access Journals (Sweden)

    W. W. Hu

    2013-10-01

    Full Text Available In order to understand the aging and processing of organic aerosols (OA, an intensive field campaign (Campaign of Air Pollution at Typical Coastal Areas IN Eastern China, CAPTAIN was conducted March–April at a receptor site (a Changdao island in central eastern China. Multiple fast aerosol and gas measurement instruments were used during the campaign, including a high resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS that was applied to measure mass concentrations and non-refractory chemical components of submicron particles (PM1nr. The average mass concentration of PM1(PM1nr+black carbon was 47 ± 36 μg m−3 during the campaign and showed distinct variation, depending on back trajectories and their overlap with source regions. Organic aerosol (OA is the largest component of PM1 (30%, followed by nitrate (28%, sulfate (19%, ammonium (15%, black carbon (6%, and chloride (3%. Four OA components were resolved by positive matrix factorization (PMF of the high-resolution spectra, including low-volatility oxygenated organic aerosol (LV-OOA, semi-volatile oxygenated OA (SV-OOA, hydrocarbon-like OA (HOA and a coal combustion OA (CCOA. The mass spectrum of CCOA had high abundance of fragments from polycyclic aromatic hydrocarbons (PAHs (m/z 128, 152, 178, etc.. The average atomic ratio of oxygen to carbon in OA (O / C at Changdao was 0.59, which is comparable to other field studies reported at locations downwind of large pollution sources, indicating the oxidized nature of most OA during the campaign. The evolution of OA elemental composition in the van Krevelen diagram (H / C vs. O / C showed a slope of −0.63; however, the OA influenced by coal combustion exhibits a completely different evolution that appears dominated by physical mixing. The aging of organic aerosols vs. photochemical age was investigated. It was shown that OA / ΔCO, as well as LV-OOA / ΔCO and SV-OOA / ΔCO, positively correlated with photochemical age. LV

  12. Is political conservatism synonymous with authoritarianism?

    Science.gov (United States)

    Crowson, H Michael; Thoma, Stephen J; Hestevold, Nita

    2005-10-01

    The authors performed 2 studies that tested the distinction between conservative political ideology and right-wing authoritarianism (RWA). Across these studies, moderate relationships emerged between RWA and our measures of cognitive rigidity, whereas the relationship between rigidity and mainstream conservative ideology was not as strong. The authors used partial-correlation and path analyses to assess the possibility that RWA mediates the relationship between (a) cognitive rigidity and (b) mainstream conservative attitudes and self-identified conservatism. The results indicated that conservatism is not synonymous with RWA. Additionally, RWA appeared to partially mediate the relationship between cognitive rigidity and mainstream conservatism.

  13. Health assessment for Newcastle Abandoned Container Site, Newcastle, Delaware, Region 3. CERCLIS No. DED058980442. Preliminary report

    International Nuclear Information System (INIS)

    1988-01-01

    The Newcastle Abandoned Container site is listed on the National Priorities List. On February 28, 1986, radioactive, corrosive, and toxic materials, and a large number of containers filled with unknown material, were inventoried, containerized, and removed. On-site contamination consists of polychlorinated biphenyls, trichloroethylene, creosote, chloroform, and di-n-butylphthalate in soil; and tetrachloroethylene, acetone, xylene, trichlorofluoromethane, trichloroethylene, and tris(betachloroisopropyl)phosphate in groundwater. The site is considered to be of potential public health concern because of the risk to human health caused by the possibility of exposure to hazardous substances via groundwater. The potential for contamination of the lower aquifer should be investigated

  14. Variation of particle number size distributions and chemical compositions at the urban and downwind regional sites in the Pearl River Delta during summertime pollution episodes

    Science.gov (United States)

    Yue, D. L.; Hu, M.; Wu, Z. J.; Guo, S.; Wen, M. T.; Nowak, A.; Wehner, B.; Wiedensohler, A.; Takegawa, N.; Kondo, Y.; Wang, X. S.; Li, Y. P.; Zeng, L. M.; Zhang, Y. H.

    2010-10-01

    In order to characterize the features of particulate pollution in the Pearl River Delta (PRD) in the summer, continuous measurements of particle number size distributions and chemical compositions were simultaneously performed at Guangzhou urban site (GZ) and Back-garden downwind regional site (BG) in July 2006. Particle number concentration from 20 nm to 10 μm at BG was (1.7±0.8)×104 cm-3, about 40% lower than that at GZ, (2.9±1.1)×104 cm-3. The total particle volume concentration at BG was 94±34 μm3 cm-3, similar to that at GZ, 96±43 μm3 cm-3. More 20-100 nm particles, significantly affected by the traffic emissions, were observed at GZ, while 100-660 nm particle number concentrations were similar at both sites as they are more regional. PM2.5 values were similar at GZ (69±43 μg m-3) and BG (69±58 μg m-3) with R2 of 0.71 for the daily average PM2.5 at these two sites, indicating the fine particulate pollution in the PRD region to be regional. Two kinds of pollution episodes, the accumulation pollution episode and the regional transport pollution episode, were observed. Fine particles over 100 nm dominated both number and volume concentrations of total particles during the late periods of these pollution episodes. Accumulation and secondary transformation are the main reasons for the nighttime accumulation pollution episode. SO42-, NO3- accounted for about 60% in 100-660 nm particle mass and PM2.5 increase. When south or southeast wind prevailed in the PRD region, regional transport of pollutants took place. Regional transport contributed about 30% to fine particulate pollution at BG during a regional transport case. Secondary transformation played an important role during regional transport, causing higher increase rates of secondary ions in PM1.0 than other species and shifting the peaks of sulfate and ammonium mass size distributions to larger sizes. SO42-, NO3-, and NH4+ accounted for about 70% and 40% of PM1.0 and PM2.5, respectively.

  15. Whole-gene positive selection, elevated synonymous substitution rates, duplication, and indel evolution of the chloroplast clpP1 gene.

    Directory of Open Access Journals (Sweden)

    Per Erixon

    Full Text Available BACKGROUND: Synonymous DNA substitution rates in the plant chloroplast genome are generally relatively slow and lineage dependent. Non-synonymous rates are usually even slower due to purifying selection acting on the genes. Positive selection is expected to speed up non-synonymous substitution rates, whereas synonymous rates are expected to be unaffected. Until recently, positive selection has seldom been observed in chloroplast genes, and large-scale structural rearrangements leading to gene duplications are hitherto supposed to be rare. METHODOLOGY/PRINCIPLE FINDINGS: We found high substitution rates in the exons of the plastid clpP1 gene in Oenothera (the Evening Primrose family and three separate lineages in the tribe Sileneae (Caryophyllaceae, the Carnation family. Introns have been lost in some of the lineages, but where present, the intron sequences have substitution rates similar to those found in other introns of their genomes. The elevated substitution rates of clpP1 are associated with statistically significant whole-gene positive selection in three branches of the phylogeny. In two of the lineages we found multiple copies of the gene. Neighboring genes present in the duplicated fragments do not show signs of elevated substitution rates or positive selection. Although non-synonymous substitutions account for most of the increase in substitution rates, synonymous rates are also markedly elevated in some lineages. Whereas plant clpP1 genes experiencing negative (purifying selection are characterized by having very conserved lengths, genes under positive selection often have large insertions of more or less repetitive amino acid sequence motifs. CONCLUSIONS/SIGNIFICANCE: We found positive selection of the clpP1 gene in various plant lineages to correlated with repeated duplication of the clpP1 gene and surrounding regions, repetitive amino acid sequences, and increase in synonymous substitution rates. The present study sheds light on the

  16. AMCO On-Site Trichloroethene (TCE) Air Monitoring Points, Oakland CA, Live 2017, US EPA Region 9

    Data.gov (United States)

    U.S. Environmental Protection Agency — This feature class contains points depicting locations and air monitor sensor readings for Trichloroethene (TCE) and supports the AMCO Chemical Superfund Site air...

  17. HEIGHT GROWTH OF Araucaria angustifolia (Bert. O. Ktze. ON THREE NATURAL SITES, AT REGION OF CANELA - RS

    Directory of Open Access Journals (Sweden)

    Luciano Weber Scheeren

    2009-09-01

    Full Text Available This work has had as its principal objectives the study of dominant height growth considering its age in three natural sites, and the determination of natural sites classification efficacy for the Araucaria angustifolia (Bert. O. Ktze. in a planting stand in Canela, RS. For height and age data adjustment, determined through stem analysis, it was used the RICHARDS (1959 non-linear mathematics model, with two and three coefficients, resulting the three coefficient model as the most efficient to data adjustment of twelve dominant tree sampled on three natural sites in study. Seven groups of dominant trees with different trends growth were obtained, indicating that the natural sites classification did not detect with accuracy the effects of environmental  variables on height growth of Araucaria angustifolia.

  18. 2-[125I]iodomelatonin binding sites in hamster brain membranes: pharmacological characteristics and regional distribution

    International Nuclear Information System (INIS)

    Duncan, M.J.; Takahashi, J.S.; Dubocovich, M.L.

    1988-01-01

    Studies in a variety of seasonally breeding mammals have shown that melatonin mediates photoperiodic effects on reproduction. Relatively little is known, however, about the site(s) or mechanisms of action of this hormone for inducing reproductive effects. Although binding sites for [3H]melatonin have been reported previously in bovine, rat, and hamster brain, the pharmacological selectivity of these sites was never demonstrated. In the present study, we have characterized binding sites for a new radioligand, 2-[125I]iodomelatonin, in brains from a photoperiodic species, the Syrian hamster. 2-[125I]Iodomelatonin labels a high affinity binding site in hamster brain membranes. Specific binding of 2-[125I]iodomelatonin is rapid, stable, saturable, and reversible. Saturation studies demonstrated that 2-[125I]iodomelatonin binds to a single class of sites with an affinity constant (Kd) of 3.3 +/- 0.5 nM and a total binding capacity (Bmax) of 110.2 +/- 13.4 fmol/mg protein (n = 4). The Kd value determined from kinetic analysis (3.1 +/- 0.9 nM; n = 5) was very similar to that obtained from saturation experiments. Competition experiments showed that the relative order of potency of a variety of indoles for inhibition of 2-[125I]iodomelatonin binding site to hamster brain membranes was as follows: 6-chloromelatonin greater than or equal to 2-iodomelatonin greater than N-acetylserotonin greater than or equal to 6-methoxymelatonin greater than or equal to melatonin greater than 6-hydroxymelatonin greater than or equal to 6,7-dichloro-2-methylmelatonin greater than 5-methoxytryptophol greater than 5-methoxytryptamine greater than or equal to 5-methoxy-N,N-dimethyltryptamine greater than N-acetyltryptamine greater than serotonin greater than 5-methoxyindole (inactive)

  19. Hydrogeological boundary settings in SR 97. Uncertainties in regional boundary settings and transfer of boundary conditions to site-scale models

    International Nuclear Information System (INIS)

    Follin, S.

    1999-06-01

    The SR 97 project presents a performance assessment (PA) of the overall safety of a hypothetical deep repository at three sites in Sweden arbitrarily named Aberg, Beberg and Ceberg. One component of this PA assesses the uncertainties in the hydrogeological modelling. This study focuses on uncertainties in boundary settings (size of model domain and boundary conditions) in the regional and site-scale hydrogeological modelling of the three sites used to simulating the possible transport of radionuclides from the emplacement waste packages through the host rock to the accessible environment. Model uncertainties associated with, for instance, parameter heterogeneity and structural interpretations are addressed in other studies. This study concludes that the regional modelling of the SR 97 project addresses uncertainties in the choice of boundary conditions and size of model domain differently at each site, although the overall handling is acceptable and in accordance with common modelling practice. For example, the treatment of uncertainties with regard to the ongoing post-glacial flushing of the Baltic Shield is creditably addressed although not exhaustive from a modelling point of view. A significant contribution of the performed modelling is the study of nested numerical models, i.e., the numerical interplay between regional and site-scale numerical models. In the site-scale modelling great efforts are made to address problems associated with (i) the telescopic mesh refinement (TMR) technique with regard to the stochastic continuum approach, and (ii) the transfer of boundary conditions between variable-density flow systems and flow systems that are constrained to treat uniform density flow. This study concludes that the efforts made to handle these problems are acceptable with regards to the objectives of the SR 97 project

  20. Cre recombinase activity is inhibited in vivo but not ex vivo by a mutation in the asymmetric spacer region of the distal loxP site.

    Science.gov (United States)

    Arguello, Tania; Moraes, Carlos T

    2015-11-01

    The cre/loxP recombination system is a valuable tool used to generate tissue specific genomic rearrangements in mouse models. The deletion of a region of interest flanked by two loxP sites is accomplished by the recombinase (cre) enzyme, which binds to the inverted repeat segments of two loxP sites and recognition of a conserved TA sequence in the asymmetric central spacer region "ATAACTTCGTATA -NNNTANNN-TATACGAAGTTAT. In vivo, we found that a single T to C mutation at position 4 of the central spacer region in the distal (3') loxP site, completely inhibited the recombination reaction in two conditional mouse models. These mice were generated using a mitochondrial methionyl-tRNA formyltransferase (Mtfmt) gene targeted construct and cre transgene under the control of tissue-specific promoters: calcium/calmodulin-dependent kinase II alpha (Camk2a-cre) and myosin light polypeptide 1 (Myl1-cre). Surprisingly, transient transfection of a plasmid expressing cre in dermal fibroblasts derived from the same mutant floxed Mtfmt((loxP/loxP)) mice line, successfully deleted the region of interest. This study demonstrates the sequence specificity required in vivo, the possibility of bypassing this limitation by expressing high levels of cre recombinase ex vivo and raises concerns related to the quality control of large scale production of gene targeted constructs and mice. genesis 53:695-700, 2015. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

  1. Chemical characterization and source identification of PM2.5 at multiple sites in the Beijing-Tianjin-Hebei region, China

    Science.gov (United States)

    Huang, Xiaojuan; Liu, Zirui; Liu, Jingyun; Hu, Bo; Wen, Tianxue; Tang, Guiqian; Zhang, Junke; Wu, Fangkun; Ji, Dongsheng; Wang, Lili; Wang, Yuesi

    2017-11-01

    The simultaneous observation and analysis of atmospheric fine particles (PM2.5) on a regional scale is an important approach to develop control strategies for haze pollution. In this study, samples of filtered PM2.5 were collected simultaneously at three urban sites (Beijing, Tianjin, and Shijiazhuang) and at a regional background site (Xinglong) in the Beijing-Tianjin-Hebei (BTH) region from June 2014 to April 2015. The PM2.5 at the four sites was mainly comprised of organic matter, secondary inorganic ions, and mineral dust. Positive matrix factorization (PMF) demonstrated that, on an annual basis, secondary inorganic aerosol was the largest PM2.5 source in this region, accounting for 29.2-40.5 % of the PM2.5 mass at the urban sites; the second-largest PM2.5 source was motor vehicle exhaust, particularly in Beijing (24.9 %), whereas coal combustion was also a large source in Tianjin (12.4 %) and Shijiazhuang (15.5 %), with particular dominance in winter. Secondary inorganic aerosol plays a vital role in the haze process, with the exception of the spring haze in Shijiazhuang and Tianjin, for which the dust source was crucial. In addition to secondary transformations, local direct emissions (coal combustion and motor vehicle exhaust) significantly contribute to the winter haze at the urban sites. Moreover, with the aggravation of haze pollution, the OC / EC mass ratio of PM2.5 decreased considerably and the nitrate-rich secondary aerosol increased during all four seasons in Beijing, both of which indicate that local motor vehicle emissions significantly contribute to the severe haze episodes in Beijing. To assess the impacts of regional transport on haze pollution, the PMF results were further processed with backward-trajectory cluster analysis, revealing that haze pollution usually occurred when air masses originating from polluted industrial regions in the south prevailed and is characterized by high PM2.5 loadings with considerable contributions from secondary

  2. Chemical characterization and source identification of PM2.5 at multiple sites in the Beijing–Tianjin–Hebei region, China

    Directory of Open Access Journals (Sweden)

    X. Huang

    2017-11-01

    Full Text Available The simultaneous observation and analysis of atmospheric fine particles (PM2.5 on a regional scale is an important approach to develop control strategies for haze pollution. In this study, samples of filtered PM2.5 were collected simultaneously at three urban sites (Beijing, Tianjin, and Shijiazhuang and at a regional background site (Xinglong in the Beijing–Tianjin–Hebei (BTH region from June 2014 to April 2015. The PM2.5 at the four sites was mainly comprised of organic matter, secondary inorganic ions, and mineral dust. Positive matrix factorization (PMF demonstrated that, on an annual basis, secondary inorganic aerosol was the largest PM2.5 source in this region, accounting for 29.2–40.5 % of the PM2.5 mass at the urban sites; the second-largest PM2.5 source was motor vehicle exhaust, particularly in Beijing (24.9 %, whereas coal combustion was also a large source in Tianjin (12.4 % and Shijiazhuang (15.5 %, with particular dominance in winter. Secondary inorganic aerosol plays a vital role in the haze process, with the exception of the spring haze in Shijiazhuang and Tianjin, for which the dust source was crucial. In addition to secondary transformations, local direct emissions (coal combustion and motor vehicle exhaust significantly contribute to the winter haze at the urban sites. Moreover, with the aggravation of haze pollution, the OC ∕ EC mass ratio of PM2.5 decreased considerably and the nitrate-rich secondary aerosol increased during all four seasons in Beijing, both of which indicate that local motor vehicle emissions significantly contribute to the severe haze episodes in Beijing. To assess the impacts of regional transport on haze pollution, the PMF results were further processed with backward-trajectory cluster analysis, revealing that haze pollution usually occurred when air masses originating from polluted industrial regions in the south prevailed and is characterized by high PM2.5 loadings with considerable

  3. New data on the structure of shear wave attenuation field in the region of the Semipalatinsk test site

    International Nuclear Information System (INIS)

    Kopnichev, Yu.F.; Sokolova, I.N.

    2001-01-01

    Using the recordings of the chemical explosions in Kazakhstan, obtained by locally deployed stations, we have studied the structure of the attenuation field in the earth's crust and upper mantle in the areas of the Degelen and Balapan test sites. We have analyzed the characteristics of short-period coda envelopes at frequencies of 1.25 and 5 Hz. The study has shown that abnormally high S-wave attenuation is observed at the Balapan site in the depth range of 10-120 km, where two large fault zones pass. At the Degelen site, the attenuation for the same depth range is much weaker. However, Q values sharply increase at the depth over 200 km in the area of the Semipalatinsk test site. We suppose that spatial-temporal variations of the attenuation field structure are associated with a rise of juvenile fluids through the deep fault zones caused by the long and intensive influence of the explosions. Such a mechanism also allows us to explain the existence of a large-scale heat anomaly in the area of the northeastern Kazakhstan, including the Semipalatinsk test site. (author)

  4. Legal consequences of the special development plan 'power plant sites' on regional planning and on guidelines for building plans

    International Nuclear Information System (INIS)

    1978-01-01

    The Special Development Plan 'Power plant sites' was made compulsory by the regulation given by the Land government in Juli 1976. For extending the energy supply system this Special Development Plan intends to provide a sufficient amount of power plant sites suitably located with regard to present and future consumption centres and permitting a cooling by means of river water while safeguarding the interests of water resources policy. The Special Development Plan established in accordance with the articles 25 and 27 of the planning law of the Land lays down that 14 specified areas are to be kept free from utilization purposes which could be opposed to the realization of power plant projects. Thus the securing of these (potential) sites has become an objective of area planning and planning of the Land in the sense of article 5 paragraph 4 of the Federal law on area planning. (orig./HP) [de

  5. CARETS: A prototype regional environmental information system. Volume 9: Shore zone land use and land cover; Central Atlantic Regional Ecological Test Site

    Science.gov (United States)

    Alexander, R. H. (Principal Investigator); Dolan, R.; Hayden, B. P.; Vincent, C. L.

    1975-01-01

    The author has identified the following significant results. Analysis of the land use and land cover maps provides a stratification of the CARETS shore area into regions which have a similar environmental organization. Different elements of the landscape are altered less frequently moving inland. Near the beach, higher frequency of monitoring is needed than is needed in the inland areas, including the marsh and estuarine areas.

  6. Regional hydrogeological simulations for Forsmark - numerical modelling using DarcyTools. Preliminary site description Forsmark area version 1.2

    International Nuclear Information System (INIS)

    Follin, Sven; Stigsson, Martin; Svensson, Urban

    2005-12-01

    A numerical model is developed on a regional-scale (hundreds of square kilometres) to study the zone of influence for variable-density groundwater flow that affects the Forsmark area. Transport calculations are performed by particle tracking from a local-scale release area (a few square kilometres) to test the sensitivity to different hydrogeological uncertainties and the need for far-field realism. The main objectives of the regional flow modelling were to achieve the following: I. Palaeo-hydrogeological understanding: An improved understanding of the palaeohydrogeological conditions is necessary in order to gain credibility for the site descriptive model in general and the hydrogeological description in particular. This requires modelling of the groundwater flow from the last glaciation up to present-day with comparisons against measured TDS and other hydro-geochemical measures. II. Simulation of flow paths: The simulation and visualisation of flow paths from a tentative repository area is a means for describing the role of the current understanding of the modelled hydrogeological conditions in the target volume, i.e. the conditions of primary interest for Safety Assessment. Of particular interest here is demonstration of the need for detailed far-field realism in the numerical simulations. The motivation for a particular model size (and resolution) and set of boundary conditions for a realistic description of the recharge and discharge connected to the flow at repository depth is an essential part of the groundwater flow path simulations. The numerical modelling was performed by two separate modelling teams, the ConnectFlow Team and the DarcyTools Team. The work presented in this report was based on the computer code DarcyTools developed by Computer-aided Fluid Engineering. DarcyTools is a kind of equivalent porous media (EPM) flow code specifically designed to treat flow and salt transport in sparsely fractured crystalline rock intersected by transmissive

  7. Regional hydrogeological simulations for Forsmark - numerical modelling using DarcyTools. Preliminary site description Forsmark area version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2005-12-15

    A numerical model is developed on a regional-scale (hundreds of square kilometres) to study the zone of influence for variable-density groundwater flow that affects the Forsmark area. Transport calculations are performed by particle tracking from a local-scale release area (a few square kilometres) to test the sensitivity to different hydrogeological uncertainties and the need for far-field realism. The main objectives of the regional flow modelling were to achieve the following: I. Palaeo-hydrogeological understanding: An improved understanding of the palaeohydrogeological conditions is necessary in order to gain credibility for the site descriptive model in general and the hydrogeological description in particular. This requires modelling of the groundwater flow from the last glaciation up to present-day with comparisons against measured TDS and other hydro-geochemical measures. II. Simulation of flow paths: The simulation and visualisation of flow paths from a tentative repository area is a means for describing the role of the current understanding of the modelled hydrogeological conditions in the target volume, i.e. the conditions of primary interest for Safety Assessment. Of particular interest here is demonstration of the need for detailed far-field realism in the numerical simulations. The motivation for a particular model size (and resolution) and set of boundary conditions for a realistic description of the recharge and discharge connected to the flow at repository depth is an essential part of the groundwater flow path simulations. The numerical modelling was performed by two separate modelling teams, the ConnectFlow Team and the DarcyTools Team. The work presented in this report was based on the computer code DarcyTools developed by Computer-aided Fluid Engineering. DarcyTools is a kind of equivalent porous media (EPM) flow code specifically designed to treat flow and salt transport in sparsely fractured crystalline rock intersected by transmissive

  8. Chemical characterization and spatial distribution of PAHs and heavy hydrocarbons in rural sites of Campania Region, South Italy.

    Science.gov (United States)

    Monaco, D; Riccio, A; Chianese, E; Adamo, P; Di Rosa, S; Fagnano, M

    2015-10-01

    In this paper, the behaviour and distribution patterns of heavy hydrocarbons and several polycyclic aromatic hydrocarbon (PAH) priority pollutants, as listed by the US Environmental Protection Agency, were evaluated in 891 soil samples. The samples were collected in three expected polluted rural sites in Campania (southern Italy) as part of the LIFE11 ECOREMED project, funded by the European Commission, to test innovative agriculture-based soil restoration techniques. These sites have been selected because they have been used for the temporary storage of urban and building waste (Teverola), subject to illicit dumping of unknown material (Trentola-Ducenta), or suspected to be polluted by metals due to agricultural practices (Giugliano). Chemical analysis of soil samples allowed the baseline pollution levels to be determined prior to any intervention. It was found that these areas can be considered contaminated for residential use, in accordance with Italian environmental law (Law Decree 152/2006). Statistical analysis applied to the data proved that average mean concentrations of heavy hydrocarbons could be as high as 140 mg/kg of dry soil with peaks of 700 mg/kg of dry soil, for the Trentola-Ducenta site; the median concentration of analytical results for hydrocarbon (HC) concentration for the Trentola-Ducenta and Giugliano sites was 63 and 73.4 mg/kg dry soil, respectively; for Teverola, the median level was 35 mg/kg dry soil. Some PAHs (usually benzo(a)pyrene) also exceeded the maximum allowed level in all sites. From the principal component analysis applied to PAH concentrations, it emerged that pollutants can be supposed to derive from a single source for the three sites. Diagnostic ratios calculated to determine possible PAH sources suggest petroleum combustion or disposal practice. Our sampling protocol also showed large dishomogeneity in soil pollutant spatial distribution, even at a scale as small as 3.3 m, indicating that variability could emerge at very

  9. PMF and PSCF based source apportionment of PM2.5 at a regional background site in North China

    Science.gov (United States)

    Zong, Zheng; Wang, Xiaoping; Tian, Chongguo; Chen, Yingjun; Fu, Shanfei; Qu, Lin; Ji, Ling; Li, Jun; Zhang, Gan

    2018-05-01

    To apportion regional PM2.5 (atmospheric particles with aerodynamic diameter water-soluble ions and inorganic elements, various approaches, such as Mann-Kendall test, chemical mass closure, ISORROPIA II model, Positive Matrix Factorization (PMF) linked with Potential Source Contribution Function (PSCF), were used to explore the PM2.5 speciation, sources, and source regions. Consequently, distinct seasonal variations of PM2.5 and its main species were found and could be explained by varying emission source characteristics. Based on PMF model, seven source factors for PM2.5 were identified, which were coal combustion + biomass burning, vehicle emission, mineral dust, ship emission, sea salt, industry source, refined chrome industry with the contribution of 48.21%, 30.33%, 7.24%, 6.63%, 3.51%, 3.2%, and 0.88%, respectively. In addition, PSCF analysis using the daily contribution of each factor from PMF result suggested that Shandong peninsula and Hebei province were identified as the high potential region for coal combustion + biomass burning; Beijing-Tianjin-Hebei (BTH) region was the main source region for industry source; Bohai Sea and East China Sea were found to be of high source potential for ship emission; Geographical region located northwest of BH Island was possessed of high probability for sea salt; Mineral dust presumably came from the region of Mongolia; Refined chrome industry mostly came from Liaoning, Jilin province; The vehicle emission was primarily of BTH region origin, centring on metropolises, such as Beijing and Tianjin. These results provided precious implications for PM2.5 control strategies in North China.

  10. Growth potential of alternative eucalyptus species for mid and high altitude sites in the summer rainfall region in South Africa

    CSIR Research Space (South Africa)

    Komakech Otim, C

    2008-12-01

    Full Text Available to evaluate the growth potential of the unimproved Australian species and the improved commercial controls incorporated into the trials. Volume production and basal area growth were assessed for the three species at all sites. However, only three sub species E...

  11. Extended region of nodulation genes in Rhizobium meliloti 1021. II. Nucleotide sequence, transcription start sites and protein products

    International Nuclear Information System (INIS)

    Fisher, R.F.; Swanson, J.A.; Mulligan, J.T.; Long, S.R.

    1987-01-01

    The authors have established the DNA sequence and analyzed the transcription and translation products of a series of putative nodulation (nod) genes in Rhizobium meliloti strain 1021. Four loci have been designated nodF, nodE, nodG and nodH. The correlation of transposon insertion positions with phenotypes and open reading frames was confirmed by sequencing the insertion junctions of the transposons. The protein products of these nod genes were visualized by in vitro expression of cloned DNA segments in a R. meliloti transcription-translation system. In addition, the sequence for nodG was substantiated by creating translational fusions in all three reading frames at several points in the sequence; the resulting fusions were expressed in vitro in both E. coli and R. meliloti transcription-translation systems. A DNA segment bearing several open reading frames downstream of nodG corresponds to the putative nod gene mutated in strain nod-216. The transcription start sites of nodF and nodH were mapped by primer extension of RNA from cells induced with the plant flavone, luteolin. Initiation of transcription occurs approximately 25 bp downstream from the conserved sequence designated the nod box, suggesting that this conserved sequence acts as an upstream regulator of inducible nod gene expression. Its distance from the transcription start site is more suggestive of an activator binding site rather than an RNA polymerase binding site

  12. Morbidity among children living around clinical waste treatment and disposal site in the Northwest region of Cameroon

    Directory of Open Access Journals (Sweden)

    Peter I. K. Mochungong

    2011-03-01

    Full Text Available Clinical waste is ineffectively treated and disposed in Cameroon. Disposal sites have unrestricted access and are located within communities. We hypothesize that vector proliferation and exposure to chronic low-level emissions will increase morbidity in children living around such sites. Self-reported disease frequency questionnaires were used to estimate the frequency of new episodes of intestinal, respiratory and skin infections among exposed children less than 10 years. Data was simultaneously collected for unexposed children of the same age, using the same questionnaire. Data reporting by the parents was done in the first week in each of the 6 months study period. The risk ratios were 3.54 (95% CI, 2.19-5.73, 3.20 (95% CI, 1.34-7.60 and 1.35 (95% CI, 0.75-2.44 for respiratory, intestinal and skin infections respectively. Their respective risk differences were 0.47 (47%, 0.18 (18% and 0.08 (8%. The study revealed that poor treatment and disposal of clinical waste sites enhance morbidity in children living close to such areas. Simple health promotion and intervention programs such as relocating such sites can significantly reduce morbidity.

  13. The horror of wrong-site surgery continues: report of two cases in a regional trauma centre in Nigeria.

    Science.gov (United States)

    Nwosu, Arinze

    2015-01-01

    Wrong- site surgeries are iatrogenic errors encountered in the course of surgical patient management. Despite the 'never do harm' pledge in the 'Hippocratic Oath' drafted in 5(th) century BC, man is after all human, with this limitation manifesting in the physician's art despite his best intention. Beyond the catastrophic consequences of wrong- site surgery on the patient and surgeon, and the opprobrium on the art of medicine, the incidents have come to be regarded as a quality-of-care indicator. Orthopaedic surgery is a specialty with a preponderance of this phenomenon and the attendant medico-legal issues relating to malpractice claims. Consequently the specialty had pioneered institutional initiatives at preventing these 'friendly-fires'. Awareness and implementation of these initiatives however remain low in many parts of the world, hampered by a culture of denial and shame. This report presents two cases of wrong-site surgery following trauma from road-traffic accident. The first case was a closed reduction of the 'wrong' dislocated hip in the trauma/emergency unit under the care of senior residents, while the second case was attempted wrong-site surgery on the right leg in a patient with fracture of the left tibia, in conjunction with bilateral femoral fracture and right radio-ulnar fracture; by an experienced Chief Consultant Orthopaedic Surgeon operating elective list. Both are orthopaedic cases, each with some trauma to both lower extremeties. Neither of the cases was formally mentioned anywhere in clinical discourse in the hospital, much less a formal report or audit. There was no formal, institutionalized process to prevent wrong-site surgery in the health institution and this could have been largely responsible for these incidents. An open, mandatory process of reporting such incidents for relevant audit and awareness is necessary, as a mechanism for prevention rather than blame or punishment.

  14. Serotonin-stimulated phosphoinositide turnover: mediation by the S2 binding site in rat cerebral cortex but not in subcortical regions

    International Nuclear Information System (INIS)

    Conn, P.J.; Sanders-Bush, E.

    1985-01-01

    In rat cerebral cortex, serotonin (5-HT) stimulates phosphoinositide turnover with an EC50 of 1 microM in the presence of pargyline. The EC50 is 16-fold higher in the absence of pargyline. Selective S2 antagonists inhibit 5-HT-stimulated phosphoinositide turnover. Schild analysis of the blockade by ketanserin of the 5-HT effect gives an estimated Kd of ketanserin for the phosphoinositide-linked receptor of 11.7 nM, which agrees with the Kd (3.5 nM) of [ 3 H]ketanserin for the S2 site. Furthermore, MK-212, 5-HT and 5-fluorotryptamine stimulate phosphoinositide turnover with potencies that resemble their potencies at the S2 but not the S1 binding site. Of 11 agonists tested, the tryptamine derivatives tend to be more efficacious than the piperazine derivatives. The selective S1 agonist 8-hydroxy-2-(di-N-propylamino)tetralin is inactive at stimulating phosphoinositide turnover. No significant relationship exists between the regional distributions of 5-HT-stimulated phosphoinositide turnover and S2 binding sites. Furthermore, the S2 antagonist ketanserin is less potent and less efficacious in hippocampus and limbic forebrain than in cerebral cortex. These data suggest that 5-HT-stimulated phosphoinositide turnover is linked to the S2 binding site in rat cerebral cortex. However, 5-HT increases phosphoinositide turnover in subcortical regions by mechanisms other than stimulation of the S2 receptor

  15. Methodology for the elaboration of Natura 2000 sites designation acts in the Walloon Region (Belgium: calcareous grasslands in the Lesse-and-Lomme area

    Directory of Open Access Journals (Sweden)

    Mahy G.

    2005-01-01

    Full Text Available In the Walloon Region (Belgium, 239 sites have been selected to be included in the Natura 2000 network. The next step is to write designation acts in order to legally protect these 221,000 ha. In this pilot study, a designation act was elaborated for a Natura 2000 site of 2,569 ha and located in the Lesse-and-Lomme area within the Calestienne region. Although the site includes 40 ha of calcareous grasslands, characterised by an exceptional flora and fauna, this habitat is very threatened by abandonment and fragmentation.The methodology used to elaborate the designation act is presented with respect to calcareous grassland. Firstly, in spring and summer 2003, an accurate map of natural habitats was produced, with every single patch of calcareous grassland being mapped. Information was also collected in order to evaluate conservation status. Based on this information, conservation status was then assessed with respect to three different criteria: (1 integrity of the cortege species, (2 habitat structure and (3 degradations. Thirdly, the site was divided into objective zones according to the different habitats and species of Community interest found in the site. Hence, an objective zone was delineated for calcareous grasslands. This objective zone was then divided in several management units. Finally, at these different spatial levels (site, objective zone, management unit, management measures were suggested. As a result, in the draft designation act, the target is to maintain or restore 230 ha of calcareous grassland, instead of the existing 40 ha. This ambitious target requires large-scale restoration and an efficient grazing scheme. These will need important resources for their successful implementation

  16. Rapid sequence divergence rates in the 5 prime regulatory regions of young Drosophila melanogaster duplicate gene pairs

    Directory of Open Access Journals (Sweden)

    Michael H. Kohn

    2008-01-01

    Full Text Available While it remains a matter of some debate, rapid sequence evolution of the coding sequences of duplicate genes is characteristic for early phases past duplication, but long established duplicates generally evolve under constraint, much like the rest of the coding genome. As for coding sequences, it may be possible to infer evolutionary rate, selection, and constraint via contrasts between duplicate gene divergence in the 5 prime regions and in the corresponding synonymous site divergence in the coding regions. Finding elevated rates for the 5 prime regions of duplicated genes, in addition to the coding regions, would enable statements regarding the early processes of duplicate gene evolution. Here, 1 kb of each of the 5 prime regulatory regions of Drosophila melanogaster duplicate gene pairs were mapped onto one another to isolate shared sequence blocks. Genetic distances within shared sequence blocks (d5’ were found to increase as a function of synonymous (dS, and to a lesser extend, amino-acid (dA site divergence between duplicates. The rate d5’/dS was found to rapidly decay from values > 1 in young duplicate pairs (dS 0.8. Such rapid rates of 5 prime evolution exceeding 1 (~neutral predominantly were found to occur in duplicate pairs with low amino-acid site divergence and that tended to be co-regulated when assayed on microarrays. Conceivably, functional redundancy and relaxation of selective constraint facilitates subsequent positive selection on the 5 prime regions of young duplicate genes. This might promote the evolution of new functions (neofunctionalization or division of labor among duplicate genes (subfunctionalization. In contrast, similar to the vast portion of the non-coding genome, the 5 prime regions of long-established gene duplicates appear to evolve under selective constraint, indicating that these long-established gene duplicates have assumed critical functions.

  17. Physical mapping of a commonly deleted region, the site of a candidate tumor suppressor gene, at 12q22 in human male germ cell tumors

    Energy Technology Data Exchange (ETDEWEB)

    Murty, V.V.V.S.; Bosl, G.J.; Chaganti, R.S.K. [Memorial Sloan-Kettering Cancer Center, New York, NY (United States)] [and others

    1996-08-01

    A candidate tumor suppressor gene (TSG) site at 12q22 characterized by a high frequency of loss of heterozygosity (LOH) and a homozygous deletion has previously (LOH) and a homozygous deletion has previously been reported in human male germ cell tumors (GCTs). In a detailed deletion mapping analysis of 67 normal-tumor DNAs utilizing 20 polymorphic markers mapped to 12q22-q24, we identified the limits of the minimal region of deletion at 12q22 between D12S377 (priximal) and D12S296 (distal). We have constructed a YAC contig map of a 3-cM region of this band between the proximal marker D12S101 and the distal marker D12S346, which contained the minimal region of deletion in GCTs. The map is composed of 53 overlapping YACs and 3 cosmids onto which 25 polymorphic and nonpolymorphic sequence-tagged sites (STSs) were placed in a unique order. The size of the minimal region of deletion was approximately 2 Mb from overlapping, nonchimeric YACs that spanned the region. We also developed a radiation hybrid (RH) map of the region between D12S101 and D12S346 containing 17 loci. The consensus order developed by RH mapping is in good agreement with the YAC STS-content map order. The RH map estimated the distance between D12S101 and D12S346 to be 246 cR{sub 8000} and the minimal region of deletion to be 141 cR{sub 8000}. In addition, four genes that were previously mapped to 12q22 have been excluded as candidate genes. The leads gained from the deletion mapping and physical maps should expedite the isolation and characterization of the TSG at 12q22. 35 refs., 4 figs., 2 tabs.

  18. GenProBiS: web server for mapping of sequence variants to protein binding sites.

    Science.gov (United States)

    Konc, Janez; Skrlj, Blaz; Erzen, Nika; Kunej, Tanja; Janezic, Dusanka

    2017-07-03

    Discovery of potentially deleterious sequence variants is important and has wide implications for research and generation of new hypotheses in human and veterinary medicine, and drug discovery. The GenProBiS web server maps sequence variants to protein structures from the Protein Data Bank (PDB), and further to protein-protein, protein-nucleic acid, protein-compound, and protein-metal ion binding sites. The concept of a protein-compound binding site is understood in the broadest sense, which includes glycosylation and other post-translational modification sites. Binding sites were defined by local structural comparisons of whole protein structures using the Protein Binding Sites (ProBiS) algorithm and transposition of ligands from the similar binding sites found to the query protein using the ProBiS-ligands approach with new improvements introduced in GenProBiS. Binding site surfaces were generated as three-dimensional grids encompassing the space occupied by predicted ligands. The server allows intuitive visual exploration of comprehensively mapped variants, such as human somatic mis-sense mutations related to cancer and non-synonymous single nucleotide polymorphisms from 21 species, within the predicted binding sites regions for about 80 000 PDB protein structures using fast WebGL graphics. The GenProBiS web server is open and free to all users at http://genprobis.insilab.org. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  19. Regional groundwater flow model for C, K. L. and P reactor areas, Savannah River Site, Aiken, SC

    Energy Technology Data Exchange (ETDEWEB)

    Flach, G.P.

    2000-02-11

    A regional groundwater flow model encompassing approximately 100 mi2 surrounding the C, K, L, and P reactor areas has been developed. The reactor flow model is designed to meet the planning objectives outlined in the General Groundwater Strategy for Reactor Area Projects by providing a common framework for analyzing groundwater flow, contaminant migration and remedial alternatives within the Reactor Projects team of the Environmental Restoration Department. The model provides a quantitative understanding of groundwater flow on a regional scale within the near surface aquifers and deeper semi-confined to confined aquifers. The model incorporates historical and current field characterization data up through Spring 1999. Model preprocessing is automated so that future updates and modifications can be performed quickly and efficiently. The CKLP regional reactor model can be used to guide characterization, perform scoping analyses of contaminant transport, and serve as a common base for subsequent finer-scale transport and remedial/feasibility models for each reactor area.

  20. Regional groundwater flow model for C, K. L. and P reactor areas, Savannah River Site, Aiken, SC

    International Nuclear Information System (INIS)

    Flach, G.P.

    2000-01-01

    A regional groundwater flow model encompassing approximately 100 mi2 surrounding the C, K, L, and P reactor areas has been developed. The reactor flow model is designed to meet the planning objectives outlined in the General Groundwater Strategy for Reactor Area Projects by providing a common framework for analyzing groundwater flow, contaminant migration and remedial alternatives within the Reactor Projects team of the Environmental Restoration Department. The model provides a quantitative understanding of groundwater flow on a regional scale within the near surface aquifers and deeper semi-confined to confined aquifers. The model incorporates historical and current field characterization data up through Spring 1999. Model preprocessing is automated so that future updates and modifications can be performed quickly and efficiently. The CKLP regional reactor model can be used to guide characterization, perform scoping analyses of contaminant transport, and serve as a common base for subsequent finer-scale transport and remedial/feasibility models for each reactor area

  1. Consortium for Osteogenesis Imperfecta Mutations in the Helical Domain of Type I Collagen: Regions Rich in Lethal Mutations Align With Collagen Binding Sites for Integrins and Proteoglycans

    Science.gov (United States)

    Marini, Joan C.; Forlino, Antonella; Cabral, Wayne A.; Barnes, Aileen M.; San Antonio, James D.; Milgrom, Sarah; Hyland, James C.; Körkkö, Jarmo; Prockop, Darwin J.; De Paepe, Anne; Coucke, Paul; Symoens, Sofie; Glorieux, Francis H.; Roughley, Peter J.; Lund, Alan M.; Kuurila-Svahn, Kaija; Hartikka, Heini; Cohn, Daniel H.; Krakow, Deborah; Mottes, Monica; Schwarze, Ulrike; Chen, Diana; Yang, Kathleen; Kuslich, Christine; Troendle, James; Dalgleish, Raymond; Byers, Peter H.

    2014-01-01

    Osteogenesis imperfecta (OI) is a generalized disorder of connective tissue characterized by fragile bones and easy susceptibility to fracture. Most cases of OI are caused by mutations in type I collagen. We have identified and assembled structural mutations in type I collagen genes (COL1A1 and COL1A2, encoding the proα1(I) and proα2(I) chains, respectively) that result in OI. Quantitative defects causing type I OI were not included. Of these 832 independent mutations, 682 result in substitution for glycine residues in the triple helical domain of the encoded protein and 150 alter splice sites. Distinct genotype–phenotype relationships emerge for each chain. One-third of the mutations that result in glycine substitutions in α1(I) are lethal, especially when the substituting residues are charged or have a branched side chain. Substitutions in the first 200 residues are nonlethal and have variable outcome thereafter, unrelated to folding or helix stability domains. Two exclusively lethal regions (helix positions 691–823 and 910–964) align with major ligand binding regions (MLBRs), suggesting crucial interactions of collagen monomers or fibrils with integrins, matrix metalloproteinases (MMPs), fibronectin, and cartilage oligomeric matrix protein (COMP). Mutations in COL1A2 are predominantly nonlethal (80%). Lethal substitutions are located in eight regularly spaced clusters along the chain, supporting a regional model. The lethal regions align with proteoglycan binding sites along the fibril, suggesting a role in fibril–matrix interactions. Recurrences at the same site in α2(I) are generally concordant for outcome, unlike α1(I). Splice site mutations comprise 20% of helical mutations identified in OI patients, and may lead to exon skipping, intron inclusion, or the activation of cryptic splice sites. Splice site mutations in COL1A1 are rarely lethal; they often lead to frameshifts and the mild type I phenotype. In α2(I), lethal exon skipping events are

  2. Source apportionment of PM2.5 at multiple Northwest U.S. sites: Assessing regional winter wood smoke impacts from residential wood combustion

    Science.gov (United States)

    Kotchenruther, Robert A.

    2016-10-01

    Wood smoke from residential wood combustion is a significant source of elevated PM2.5 in many communities across the Northwest U.S. Accurate representation of residential wood combustion in source-oriented regional scale air quality models is challenging because of multiple uncertainties. As an alternative to source-oriented source apportionment, this work provides, through receptor-oriented source apportionment, an assessment of winter residential wood combustion impacts at multiple Northwest U.S. locations. Source apportionment was performed on chemically speciated PM2.5 from 19 monitoring sites using the Positive Matrix Factorization (PMF) receptor model. Each site was modeled independently, but a common data preparation and modeling protocol was used so that results were as comparable as possible across sites. Model solutions had from 4 to 8 PMF factors, depending on the site. PMF factors at each site were associated with a source classification (e.g., primary wood smoke), a dominant chemical composition (e.g., ammonium nitrate), or were some mixture. 15 different sources or chemical compositions were identified as contributing to PM2.5 across the 19 sites. The 6 most common were; aged wood smoke and secondary organic carbon, motor vehicles, primary wood smoke, ammonium nitrate, ammonium sulfate, and fugitive dust. Wood smoke was identified at every site, with both aged and primary wood smoke identified at most sites. Wood smoke contributions to PM2.5 were averaged for the two winter months of December and January, the months when wood smoke in the Northwest U.S. is mainly from residential wood combustion. The total contribution of residential wood combustion, that from primary plus aged smoke, ranged from 11.4% to 92.7% of average December and January PM2.5 depending on the site, with the highest percent contributions occurring in smaller towns that have fewer expected sources of winter PM2.5. Receptor modeling at multiple sites, such as that conducted in this

  3. A dominant control region from the human β-globin locus conferring integration site-independent gene expression.

    OpenAIRE

    Talbot, D.; Collis, P.; Antoniou, Michael; Vidal, M.; Grosveld, Frank; Greaves, David

    1989-01-01

    textabstractThe regulatory elements that determine the expression pattern of a number of eukaryotic genes expressed specifically in certain tissues have been defined and studied in detail. In general, however, the expression conferred by these elements on genes reintroduced into the genomes of cell lines and transgenic animals has turned out to be at a low level relative to that of endogenous genes, and influenced by the chromosomal site of insertion of the exogenous construct. We have previo...

  4. Characterization of coding synonymous and non-synonymous variants in ADAMTS13 using ex vivo and in silico approaches.

    Directory of Open Access Journals (Sweden)

    Nathan C Edwards

    Full Text Available Synonymous variations, which are defined as codon substitutions that do not change the encoded amino acid, were previously thought to have no effect on the properties of the synthesized protein(s. However, mounting evidence shows that these "silent" variations can have a significant impact on protein expression and function and should no longer be considered "silent". Here, the effects of six synonymous and six non-synonymous variations, previously found in the gene of ADAMTS13, the von Willebrand Factor (VWF cleaving hemostatic protease, have been investigated using a variety of approaches. The ADAMTS13 mRNA and protein expression levels, as well as the conformation and activity of the variants have been compared to that of wild-type ADAMTS13. Interestingly, not only the non-synonymous variants but also the synonymous variants have been found to change the protein expression levels, conformation and function. Bioinformatic analysis of ADAMTS13 mRNA structure, amino acid conservation and codon usage allowed us to establish correlations between mRNA stability, RSCU, and intracellular protein expression. This study demonstrates that variants and more specifically, synonymous variants can have a substantial and definite effect on ADAMTS13 function and that bioinformatic analysis may allow development of predictive tools to identify variants that will have significant effects on the encoded protein.

  5. Trp53 deficient mice predisposed to preterm birth display region-specific lipid alterations at the embryo implantation site

    Energy Technology Data Exchange (ETDEWEB)

    Lanekoff, Ingela; Cha, Jeeyeon; Kyle, Jennifer E.; Dey, Sudhansu K.; Laskin, Julia; Burnum-Johnson, Kristin E.

    2016-09-13

    Here we demonstrate that conditional deletion of mouse uterine Trp53 (p53d/d), molecularly linked to mTORC1 activation and causally linked to premature uterine senescence and preterm birth, results in aberrant lipid signatures within the heterogeneous cell types of embryo implantation sites on day 8 of pregnancy. In situ nanospray desorption electrospray ionization mass spectrometry imaging (nano-DESI MSI) was used to characterize the molecular speciation of free fatty acids, monoacylglycerols, unmodified and oxidized phosphatidylcholine (PC/Ox-PC), and diacylglycerol (DG) species within implantation sites of p53d/d mice and floxed littermates. Implantation sites from p53d/d mice exhibited distinct spatially resolved changes demonstrating accumulation of DG species, depletion of Ox-PC species, and increase in species with more unsaturated acyl chains, including arachidonic and docosahexaenoic acid. Understanding abnormal changes in the abundance and localization of individual lipid species early in the progression to premature birth is important for discovering novel targets for treatments and diagnosis.

  6. Neural substrates of semantic relationships: common and distinct left-frontal activities for generation of synonyms vs. antonyms.

    Science.gov (United States)

    Jeon, Hyeon-Ae; Lee, Kyoung-Min; Kim, Young-Bo; Cho, Zang-Hee

    2009-11-01

    Synonymous and antonymous relationships among words may reflect the organization and/or processing in the mental lexicon and its implementation in the brain. In this study, functional magnetic resonance imaging (fMRI) is employed to compare brain activities during generation of synonyms (SYN) and antonyms (ANT) prompted by the same words. Both SYN and ANT, when compared with reading nonwords (NW), activated a region in the left middle frontal gyrus (BA 46). Neighboring this region, there was a dissociation observed in that the ANT activation extended more anteriorly and laterally to the SYN activation. The activations in the left middle frontal gyrus may be related to mental processes that are shared in the SYN and ANT generations, such as engaging semantically related parts of mental lexicon for the word search, whereas the distinct activations unique for either SYN or ANT generation may reflect the additional component of antonym retrieval, namely, reversing the polarity of semantic relationship in one crucial dimension. These findings suggest that specific components in the semantic processing, such as the polarity reversal for antonym generation and the similarity assessment for synonyms, are separately and systematically laid out in the left-frontal cortex.

  7. Taking the pulse of a continent: Expanding site-based research infrastructure for regional- to continental-scale ecology

    Science.gov (United States)

    Many of the most dramatic and surprising effects of global change on ecological systems will occur across large spatial extents, from regions to continents. Multiple ecosystem types will be impacted across a range of interacting spatial and temporal scales. The ability of ecologists to understand an...

  8. Epidemiology of Enteric Disease in C-EnterNet’s Pilot Site – Waterloo Region, Ontario, 1990 to 2004

    Directory of Open Access Journals (Sweden)

    Victoria A Keegan

    2009-01-01

    Full Text Available OBJECTIVE: The objective of the present study was to describe the epidemiology of reportable enteric illness in Ontario’s Waterloo region, including comparing calculated incidence rates with published rates, and adjusting for under-reporting to determine the number of community cases, where published data were available.

  9. Evaluation of a Regional Atmospheric Model Using Measurements of Surface Heat Exchange Processes from a Site in Antarctica

    NARCIS (Netherlands)

    Lipzig, N.P.M. van; Meijgaard, E. van; Oerlemans, J.

    1999-01-01

    A regional atmospheric climate model with a horizontal grid spacing of 55 km has been used to simulate the Antarctic atmosphere during an austral summer period. ECMWF reanalyses were used to force the atmospheric prognostic variables from the lateral boundaries. Sea surface temperatures and the sea

  10. MEDIACRACY TURNS INTO A SYNONYM OF MEDIOCRITY?

    Directory of Open Access Journals (Sweden)

    Valentina CHIPER

    2014-11-01

    Full Text Available The link between freedom of speech and democracy is based on ideological legitimacy report. A new phenomenon which is worth noticing is the conversion of the freedom of expression from a freedom seen in certain aspects as a solitary freedom into a communication of the masses. Another challenge is prompted by the change of the traditional communication system at the dawn of technology, Internet and its various applications, as well as of the channels used. A weak point is the change in the values scale. If a journalist or a book is deemed good or valuable in terms of competence and ideas, these values are now unfortunately inspired by what we watch on TV. In this train of thoughts, reliable opinion leaders are no longer the same. Mediacracy turns into a synonym of mediocrity with affectivity and emotion prevailing over reason and instead of the communication of thoughts and opinions.

  11. Natural type 3/type 2 intertypic vaccine-related poliovirus recombinants with the first crossover sites within the VP1 capsid coding region.

    Science.gov (United States)

    Zhang, Yong; Zhu, Shuangli; Yan, Dongmei; Liu, Guiyan; Bai, Ruyin; Wang, Dongyan; Chen, Li; Zhu, Hui; An, Hongqiu; Kew, Olen; Xu, Wenbo

    2010-12-21

    Ten uncommon natural type 3/type 2 intertypic poliovirus recombinants were isolated from stool specimens from nine acute flaccid paralysis case patients and one healthy vaccinee in China from 2001 to 2008. Complete genomic sequences revealed their vaccine-related genomic features and showed that their first crossover sites were randomly distributed in the 3' end of the VP1 coding region. The length of donor Sabin 2 sequences ranged from 55 to 136 nucleotides, which is the longest donor sequence reported in the literature for this type of poliovirus recombination. The recombination resulted in the introduction of Sabin 2 neutralizing antigenic site 3a (NAg3a) into a Sabin 3 genomic background in the VP1 coding region, which may have been altered by some of the type 3-specific antigenic properties, but had not acquired any type 2-specific characterizations. NAg3a of the Sabin 3 strain seems atypical; other wild-type poliovirus isolates that have circulated in recent years have sequences of NAg3a more like the Sabin 2 strain. 10 natural type 3/type 2 intertypic VP1 capsid-recombinant polioviruses, in which the first crossover sites were found to be in the VP1 coding region, were isolated and characterized. In spite of the complete replacement of NAg3a by type 2-specific amino acids, the serotypes of the recombinants were not altered, and they were totally neutralized by polyclonal type 3 antisera but not at all by type 2 antisera. It is possible that recent type 3 wild poliovirus isolates may be a recombinant having NAg3a sequences derived from another strain during between 1967 and 1980, and the type 3/type 2 recombination events in the 3' end of the VP1 coding region may result in a higher fitness.

  12. Natural type 3/type 2 intertypic vaccine-related poliovirus recombinants with the first crossover sites within the VP1 capsid coding region.

    Directory of Open Access Journals (Sweden)

    Yong Zhang

    Full Text Available BACKGROUND: Ten uncommon natural type 3/type 2 intertypic poliovirus recombinants were isolated from stool specimens from nine acute flaccid paralysis case patients and one healthy vaccinee in China from 2001 to 2008. PRINCIPAL FINDINGS: Complete genomic sequences revealed their vaccine-related genomic features and showed that their first crossover sites were randomly distributed in the 3' end of the VP1 coding region. The length of donor Sabin 2 sequences ranged from 55 to 136 nucleotides, which is the longest donor sequence reported in the literature for this type of poliovirus recombination. The recombination resulted in the introduction of Sabin 2 neutralizing antigenic site 3a (NAg3a into a Sabin 3 genomic background in the VP1 coding region, which may have been altered by some of the type 3-specific antigenic properties, but had not acquired any type 2-specific characterizations. NAg3a of the Sabin 3 strain seems atypical; other wild-type poliovirus isolates that have circulated in recent years have sequences of NAg3a more like the Sabin 2 strain. CONCLUSIONS: 10 natural type 3/type 2 intertypic VP1 capsid-recombinant polioviruses, in which the first crossover sites were found to be in the VP1 coding region, were isolated and characterized. In spite of the complete replacement of NAg3a by type 2-specific amino acids, the serotypes of the recombinants were not altered, and they were totally neutralized by polyclonal type 3 antisera but not at all by type 2 antisera. It is possible that recent type 3 wild poliovirus isolates may be a recombinant having NAg3a sequences derived from another strain during between 1967 and 1980, and the type 3/type 2 recombination events in the 3' end of the VP1 coding region may result in a higher fitness.

  13. Nuclear pores and perinuclear expression sites of var and ribosomal DNA genes correspond to physically distinct regions in Plasmodium falciparum.

    Science.gov (United States)

    Guizetti, Julien; Martins, Rafael Miyazawa; Guadagnini, Stéphanie; Claes, Aurélie; Scherf, Artur

    2013-05-01

    The human malaria parasite Plasmodium falciparum modifies the erythrocyte it infects by exporting variant proteins to the host cell surface. The var gene family that codes for a large, variant adhesive surface protein called P. falciparum erythrocyte membrane protein 1 (PfEMP1) plays a particular role in this process, which is linked to pathogenesis and immune evasion. A single member of this gene family is highly transcribed while the other 59 members remain silenced. Importantly, var gene transcription occurs at a spatially restricted, but yet undefined, perinuclear site that is distinct from repressed var gene clusters. To advance our understanding of monoallelic expression, we investigated whether nuclear pores associate with the var gene expression site. To this end, we studied the nuclear pore organization during the asexual blood stage using a specific antibody directed against a subunit of the nuclear pore, P. falciparum Nup116 (PfNup116). Ring and schizont stage parasites showed highly polarized nuclear pore foci, whereas in trophozoite stage nuclear pores redistributed over the entire nuclear surface. Colocalization studies of var transcripts and anti-PfNup116 antibodies showed clear dissociation between nuclear pores and the var gene expression site in ring stage. Similar results were obtained for another differentially transcribed perinuclear gene family, the ribosomal DNA units. Furthermore, we show that in the poised state, the var gene locus is not physically linked to nuclear pores. Our results indicate that P. falciparum does form compartments of high transcriptional activity at the nuclear periphery which are, unlike the case in yeast, devoid of nuclear pores.

  14. Receptor modelling and risk assessment of volatile organic compounds measured at a regional background site in South Africa

    Science.gov (United States)

    Jaars, Kerneels; Vestenius, Mika; van Zyl, Pieter G.; Beukes, Johan P.; Hellén, Heidi; Vakkari, Ville; Venter, Marcell; Josipovic, Miroslav; Hakola, Hannele

    2018-01-01

    Volatile organic compounds (VOCs) can have significant impacts on climate and human health. Certain VOCs are proven to be carcinogenic and toxic, which can affect human health directly and indirectly. In order to develop climate change reduction strategies and to assess the impacts of VOCs on human health, it is crucial to determine the sources of VOCs, which can be emitted from biogenic and anthropogenic sources. The aim of this study was to perform source apportionment using positive matrix factorisation (PMF) analysis on VOC data collected at a regional background location affected by the major sources in the interior of South Africa, which include the western- and eastern Bushveld Igneous Complex, the Johannesburg-Pretoria metropolitan conurbation, the Vaal Triangle, the Mpumalanga Highveld and also a region of anti-cyclonic recirculation of air mass over the interior of South Africa. In addition, a risk assessment study was also performed in view of the major source regions affecting Welgegund in order to quantify the impacts of anthropogenic VOCs measured at Welgegund on human health. Measurements were conducted at the Welgegund measurement station located on a commercial farm approximately 100 km west of Johannesburg for a period of more than two years. PMF analysis revealed ten meaningful factor solutions, of which five factors were associated with biogenic emissions and five with anthropogenic sources. Three of the biogenic factors were characterised by a specific biogenic species, i.e. isoprene, limonene and 2-methyl-3-buten-2-ol (MBO), while the other two biogenic factors comprised mixtures of biogenic species with different tracer species. The temporal factor contribution for the isoprene, limonene and MBO factors correlated relatively well with the seasonal wet pattern. One anthropogenic factor was associated with emissions from a densely populated anthropogenic source region to the east of Welgegund with a large number of industrial activities, while

  15. Primary (Poorly Differentiated Sclerosing Liposarcoma of Temporal Region. An Uncommon Tumor in a Rare Site: A Case Report

    Directory of Open Access Journals (Sweden)

    Anuradha CK Rao

    2015-02-01

    Full Text Available Liposarcoma (LS in the head and neck region is a rare tumor. The sclerosing variant of LS is a subtype of well-differentiated LS characterized by areas of conventional LS admixed with hypocellular areas of stromal sclerosis that show atypical lipomatous cells. The (poorly differentiated sclerosing LS, on the other hand, is more cellular with atypical, pleomorphic and often bizarre giant tumor cells admixed with atypical lipoblasts. We report a case of poorly differentiated sclerosing LS of temporal region in a 49-year-old man. Radiologically, the tumor was dumbbell shaped with intra and extra cranial extension. In this case, we discuss the clinico-radiological and pathological findings of an unusual tumor in a rare location. [J Interdiscipl Histopathol 2015; 3(1.000: 33-35

  16. Impact of Hurricane Ivan on the regional longleaf pine growth study: is there a relation to site or stand conditions?

    Science.gov (United States)

    John S. Kush; John C. Gilbert

    2010-01-01

    The US Forest Service Regional Longleaf Pine Growth Study (RLGS) began its eighth re-measurement (40th year) during 2004 autumn. The study has 305 plots of which 171 plots are located on the Escambia Experimental Forest (EEF) in Brewton AL. EEF is operated by the U.S. Forest Service in cooperation with the T.R. Miller Mill Company. The RLGS has plots distributed across...

  17. Ash-flow tuff distribution and fault patterns as indicators of rotation of late-tertiary regional extension, Nevada test site

    International Nuclear Information System (INIS)

    Ander, H.D.

    1983-01-01

    Isopach and structure contour maps generated for Yucca Flat as well as fault pattern analyses of the Nevada Test Site (NTS) can aid in more efficient site selection and site characterization necessary for containment. Furthermore, these geologic studies indicate that most of the alluvial deposition in Yucca Flat was controlled by north-trending faults responding to a regional extension direction oriented approximately 20 0 to 30 0 west of the N50 0 W direction observed today. The Yucca Flat basin-forming Carpetbag and Yucca fault systems seem to be deflected at their southern ends into the northeast-trending Cane Spring and Mine Mountain fault systems. Left-lateral strike-slip displacement of approx. 1.4 km found on these northeasterly faults requires that most of the displacement on the combined fault systems occurred in an extension field oriented approximately N80 0 W. Fault movement in this extensional field postdates the Ammonia Tanks tuff (approx. 11 My) and was strongly active during deposition of some 1100 meters of alluvium in Yucca Flat. Time of rotation of regional extension to the presently active N50 0 W direction is unknown; however, it occurred so recently that it has not greatly modified fault displacement patterns extant at the NTS

  18. The Kelp Gull as bioindicator of environmental chemicals in the Magellan region. A comparison with other coastal sites in Chile

    Directory of Open Access Journals (Sweden)

    Jacqueline Muñoz

    1999-12-01

    Full Text Available During the breeding seasons 1994/5 and 1995/6 we collected Kelp Gull (Larus dominicanus eggs from five locations in central to south Chile to study the contamination with mercury and organochlorine compounds. The sites were Algarrobo, Concepción, Maiquillahue Bay, Doña Sebastiana Island (Chalcao channel at Chiloé and Magdalena Island (Straits of Magellan. We found differences among the sites: Kelp Gull eggs from Chiloé and Algarrobo had the greatest concentrations of mercury (about 170 ng g-1 fresh weight. Residues of DDT were greatest in eggs from Algarrobo and Maiquillahue Bay, those of PCBs (polychlorinated biphenyls greatest at Algarrobo and Concepción. HCB had highest levels at Concepción. Considering all organochlorines, samples from Algarrobo had the highest concentrations, those from Chiloé the lowest. In consequence we found a geographical pattern from north to south, i.e., from areas with greater to lesser human impact. In comparison with other studies, the levels of environmental chemicals found in Kelp Gulls from Chile are much lower than those known to cause adverse effects on reproductive success.

  19. Transport of elemental mercury in the unsaturated zone from a waste disposal site in an arid region

    Science.gov (United States)

    Walvoord, Michelle Ann; Andraski, Brian J.; Krabbenhoft, D.P.; Striegl, Robert G.

    2008-01-01

    Mercury contained in buried landfill waste may be released via upward emission to the atmosphere or downward leaching to groundwater. Data from the US Geological Survey’s Amargosa Desert Research Site (ADRS) in arid southwestern Nevada reveal another potential pathway of Hg release: long-distance (102 m) lateral migration of elemental Hg (Hg0) through the unsaturated zone. Gas collected from multiple depths from two instrumented boreholes that sample the entire 110-m unsaturated zone thickness and are located 100 and 160 m away from the closest waste burial trench exhibit gaseous Hg concentrations of up to 33 and 11 ng m−3, respectively. The vertical distribution of gaseous Hg in the borehole closest to the disposal site shows distinct subsurface peaks in concentration at depths of 1.5 and 24 m that cannot be explained by radial diffusive transport through a heterogeneous layered unsaturated zone. The inability of current models to explain gaseous Hg distribution at the ADRS highlights the need to advance the understanding of gas-phase contaminant transport in unsaturated zones to attain a comprehensive model of landfill Hg release.

  20. Radioactive waste disposal programme and siting regions for geological deep repositories. Executive summary. November 2008; Entsorgungsprogramm und Standortgebiete fuer geologische Tiefenlager. Zusammenfassung. November 2008

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2008-11-15

    There are radioactive wastes in Switzerland. Since many decades they are produced by the operation of the five nuclear power plants, by medicine, industry and research. Important steps towards the disposal of these wastes are already realized; the corresponding activities are practised. This particularly concerns handling and packaging of the radioactive wastes, their characterization and inventory, as well as the interim storage and the inferred transportations. Preparatory works in the field of scientific research on deep geological repositories have allowed to acquire high level of technical and scientific expertise in that domain. The feasibility of building long-term safe geological repositories in Switzerland was demonstrated for all types of radioactive wastes; the demonstration was accepted by the Federal Council. There is enough knowledge to propose geological siting regions for further works. The financial funds already accumulated guaranty the financing of the dismantling of the power plants as well as building deep geological repositories for the radioactive wastes. The regulations already exist and the organisational arrangements necessary for the fruitful continuation of the works already done have been taken. The programme of the disposal of radioactive wastes also describes the next stages towards the timely realization of the deep repositories as well as the level of the financial needs. The programme is updated every five years, checked by the regulatory bodies and accepted by the Federal Council who reports to the parliament. The process of choosing a site, which will be completed in the next years, is detailed in the conceptual part of the programme for deep geological repositories. The NAGRA proposals are based exclusively on technical and scientific considerations; the global evaluation taking into account also political considerations has to be performed by the authorities and the Federal Council. The programme states that at the beginning of

  1. Prevalence of shiga toxin producing Escherichia coli, Salmonella enterica, and Listeria monocytogenes at public access watershed sites in a California Central Coast agricultural region.

    Science.gov (United States)

    Cooley, Michael B; Quiñones, Beatriz; Oryang, David; Mandrell, Robert E; Gorski, Lisa

    2014-01-01

    Produce contaminated with enteric pathogens is a major source of foodborne illness in the United States. Lakes, streams, rivers, and ponds were sampled with Moore swabs bi-monthly for over 2 years at 30 locations in the vicinity of a leafy green growing region on the Central California Coast and screened for Shiga toxin producing Escherichia coli (STEC), Salmonella enterica, and Listeria monocytogenes to evaluate the prevalence and persistence of pathogen subtypes. The prevalence of STEC from 1386 samples was 11%; 110 samples (8%) contained E. coli O157:H7 with the highest prevalence occurring close to cattle operations. Non-O157 STEC isolates represented major clinical O-types and 57% contained both shiga toxin types 1 and 2 and intimin. Multiple Locus Variable Number Tandem Repeat Analysis of STEC isolates indicated prevalent strains during the period of study. Notably, Salmonella was present at high levels throughout the sampling region with 65% prevalence in 1405 samples resulting in 996 isolates with slightly lower prevalence in late autumn. There were 2, 8, and 14 sites that were Salmonella-positive over 90, 80, and 70% of the time, respectively. The serotypes identified most often were 6,8:d:-, Typhimurium, and Give. Interestingly, analysis by Pulsed Field Gel Electrophoresis indicated persistence and transport of pulsotypes in the region over several years. In this original study of L. monocytogenes in the region prevalence was 43% of 1405 samples resulting in 635 individual isolates. Over 85% of the isolates belonged to serotype 4b with serotypes 1/2a, 1/2b, 3a, 4d with 4e representing the rest, and there were 12 and 2 sites that were positive over 50 and 80% of the time, respectively. Although surface water is not directly used for irrigation in this region, transport to the produce can occur by other means. This environmental survey assesses initial contamination levels toward an understanding of transport leading to produce recalls or outbreaks.

  2. Contamination risk and drinking water protection for a large-scale managed aquifer recharge site in a semi-arid karst region, Jordan

    Science.gov (United States)

    Xanke, Julian; Liesch, Tanja; Goeppert, Nadine; Klinger, Jochen; Gassen, Niklas; Goldscheider, Nico

    2017-09-01

    Karst aquifers in semi-arid regions are particularly threatened by surface contamination, especially during winter seasons when extremely variable rainfall of high intensities prevails. An additional challenge is posed when managed recharge of storm water is applied, since karst aquifers display a high spatial variability of hydraulic properties. In these cases, adapted protection concepts are required to address the interaction of surface water and groundwater. In this study a combined protection approach for the surface catchment of the managed aquifer recharge site at the Wala reservoir in Jordan and the downstream Hidan wellfield, which are both subject to frequent bacteriological contamination, is developed. The variability of groundwater quality was evaluated by correlating contamination events to rainfall, and to recharge from the reservoir. Both trigger increased wadi flow downstream of the reservoir by surface runoff generation and groundwater seepage, respectively. A tracer test verified the major pathway of the surface flow into the underground by infiltrating from pools along Wadi Wala. An intrinsic karst vulnerability and risk map was adapted to the regional characteristics and developed to account for the catchment separation by the Wala Dam and the interaction of surface water and groundwater. Implementation of the proposed protection zones for the wellfield and the reservoir is highly recommended, since the results suggest an extreme contamination risk resulting from livestock farming, arable agriculture and human occupation along the wadi. The applied methods can be transferred to other managed aquifer recharge sites in similar karstic environments of semi-arid regions.

  3. Fine and coarse PM composition and sources in rural and urban sites in Switzerland: local or regional pollution?

    Science.gov (United States)

    Minguillón, M C; Querol, X; Baltensperger, U; Prévôt, A S H

    2012-06-15

    The chemical composition and sources of ambient particulate matter (PM) in Switzerland were studied. PM(1) and PM(10) samples were collected in winter and summer at an urban background site in Zurich and a rural background site in Payerne. Concentrations of major and trace elements, NO(3)(-), SO(4)(2-), NH(4)(+), organic and elemental carbon were determined. A subsequent Positive Matrix Factorization (PMF) analysis was performed. PM(10) and PM(1) concentrations varied similarly at both sites, with average PM(10) concentrations 24-25 μg/m(3) and 13-14 μg/m(3) in winter and summer, respectively, and average PM(1) concentrations 12-17 μg/m(3) and 6-7 μg/m(3). The influence of local sources was found to be higher in winter. PM was dominated by nitrate and organic matter in winter, and by mineral matter and organic matter in summer. Trace element concentrations related to road traffic (Zn, Cu, Sb, Sn) were higher at Zurich. Concentrations of Tl and Cs, attributed to the influence of a glass industry, were higher at Payerne. The elements mainly present in the coarse fraction were those related to mineral matter and brake and tyre abrasion (Cu, Mn, Ti, Sb, Sr, Bi, Li, La, Nd), and those in the fine fraction were related to high temperature anthropogenic processes (Pb, As, Cd, Tl, Cs). Common PM(1) and PM(1-10) sources identified by PMF were: ammonium nitrate, present in winter, negligible in summer; ammonium sulfate+K(biomass burning)+road traffic; and road traffic itself, related to exhaust emissions in PM(1) and to road dust resuspension in PM(1-10). Size-fraction specific sources were: a PM(1) glass industry source characterized by Cs, Tl, Rb, Li and Na, only present in Payerne; a PM(1) background source characterized by V, Ni, sulfate and Fe; two PM(1-10) mineral-related sources, with higher contribution in summer; a PM(1-10) salt source; and a PM(1-10) organic source, with higher contribution in summer, attributed to bioaerosols. Copyright © 2012 Elsevier B

  4. Analysis of clay smoking pipes from archeological sites in the region of the Guanabara Bay (Rio de Janeiro, Brazil) by FT-IR

    Science.gov (United States)

    Freitas, Renato P.; Ribeiro, Iohanna M.; Calza, Cristiane; Oliveira, Ana L.; Silva, Mariane L.; Felix, Valter S.; Ferreira, Douglas S.; Coelho, Felipe A.; Gaspar, Maria D.; Pimenta, André R.; Medeiros, Elanio A.; Lopes, Ricardo T.

    2016-06-01

    In this study, twenty samples of clay smoking pipes excavated in an 18 km2 area between the Macacu and Caceribu rivers, in the municipality of Itaboraí, Rio de Janeiro, Brazil were analyzed by FT-IR technique. The samples, excavated in different archeological sites of the region, are dated between the seventeenth and the nineteenth centuries and are part of the material culture left by Africans and African descendants that lived in the complex. FT-IR analyses and complementary SEM-EDS studies showed that the clay paste used in the manufacture of smoking pipes, mostly handcrafted, is composed of quartz, feldspar, phyllosilicates and iron oxides. Multivariate statistical tests (PCA) were applied to FT-IR data to assess the interactions between the archeological sites. The results indicated that one archeological site - Macacu IV - is greatly related to the other sites. The results obtained have helped archeologists and anthropologists in better understanding the manufacturing process employed in ancient ceramic artifacts produced during the period of colonial Brazil.

  5. Case studies, cross-site comparisons, and the challenge of generalization: comparing agent-based models of land-use change in frontier regions.

    Science.gov (United States)

    Parker, Dawn C; Entwisle, Barbara; Rindfuss, Ronald R; Vanwey, Leah K; Manson, Steven M; Moran, Emilio; An, Li; Deadman, Peter; Evans, Tom P; Linderman, Marc; Rizi, S Mohammad Mussavi; Malanson, George

    2008-01-01

    Cross-site comparisons of case studies have been identified as an important priority by the land-use science community. From an empirical perspective, such comparisons potentially allow generalizations that may contribute to production of global-scale land-use and land-cover change projections. From a theoretical perspective, such comparisons can inform development of a theory of land-use science by identifying potential hypotheses and supporting or refuting evidence. This paper undertakes a structured comparison of four case studies of land-use change in frontier regions that follow an agent-based modeling approach. Our hypothesis is that each case study represents a particular manifestation of a common process. Given differences in initial conditions among sites and the time at which the process is observed, actual mechanisms and outcomes are anticipated to differ substantially between sites. Our goal is to reveal both commonalities and differences among research sites, model implementations, and ultimately, conclusions derived from the modeling process.

  6. Comparison of the microstructure and composition of aboriginal ceramics, from indigenous site Caninhas, with the obtained ones in the region

    International Nuclear Information System (INIS)

    Matos, C.C.; Nakano, F.P.; Taguchi, S.P.; Camargo-Vernilli, D.; Ribeiro, R.B.; Rosa, S.J. L.

    2009-01-01

    The archaeological site of Caninhas is made of funeral and combustion structures and various objects of aboriginal daily use. These parts and fragments were safe and inventoried, constituting approximately 4000 units. The objective of this project was to analyze the microstructure and composition of archaeological ceramics, and ceramics made of argil current of the zone. The crystalline phases were identified by X-Rays Diffraction (XRD), elementary composition was obtained by X-Rays Fluorescence (XRF) and Energy Dispersive Spectrometry (EDS), and the microstructure was evaluated by Scanning Electron Microscope (SEM). Composition and microstructure of archaeological ceramics are different of current ceramics, indicating the effect of lixiviation in function of the time and the microstructural evolution due different ceramic processing. These results are valuable for the archaeological area studies, mainly for the cultural denoting which represents. The relation between some studies is basic to add knowledge: use of the ceramic materials engineering for archaeology application. (author)

  7. Superfund record of decision (EPA Region 7): Cherokee County Superfund Site, Cherokee County, KS, July 29, 1996

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1996-08-01

    The decision document presents the selected remedial action for the mining wastes at Operable Unit No. 07 of the Galena Subsite, which is part of the Cherokee County Superfund Site in Cherokee County, Kansas. The selected remedy includes actions for residential soils impacted by mining wastes and includes: Excavation and disposal of residential soils impacted by mining wastes; Health education for the general community and medical professionals; Institutional controls to guide future development in residential areas impacted by mining wastes; Treatability studies to evaluate the effectiveness of phosphate stabilization as a future alternative; and Operation and maintenance of all remedy aspects including, but not limited to, health education, institutional controls, and long-term monitoring.

  8. Radiation monitoring and dosimetry near the semipalatinsk nuclear test site. Radioecological situation, exposure of the population of the semipalatinsk region

    International Nuclear Information System (INIS)

    Stepanenko, V.F.; Tsyb, A.F.; Bogatyriova, T.I.

    1993-01-01

    Evaluation of radioecological situation around the nuclear test site as well as estimation of radioecological situation after the underground nuclear test of July 8, 1989 has been carried out. Radiation doses received by the public for the period of surface and atmospheric nuclear tests conducted from 1949 until 1963 about 10000 individuals received additional external and internal doses. The highest accumulated effective doses were estimated in the residuals of Dolon (1.6 Gy the first nuclear test of 1949), Karaul (0.37 Gy), Sarzhal (0.20 Gy). Semenovka (0.02 Gy). Yearly effective doses for the residents of Semipalatinsk during that period did not exceed 0.0056 Gy (maximum value). Collective doses were estimated for different periods from 1949 to 1989 too. Results of measuring of the environmental exposure gamma dose rates in the inspected areas and soil, plants, water, milk, meat radioactive contamination are presented too

  9. A Quality Improvement Approach to Reducing the Caesarean section Surgical Site Infection Rate in a Regional Hospital

    LENUS (Irish Health Repository)

    O’ Hanlon, M

    2016-09-01

    Surgical site infection (SSI) rates are used extensively by hospitals as a basis for quality improvement. A 30-day post-discharge SSI programme for Caesarean section operations has been implemented in Our Lady of Lourdes Hospital since 2011. It has been shown that skin antisepsis and antibiotic prophylaxis are key factors in the prevention of SSI. Using quality improvement methodology, an infection prevention bundle was introduced to address these two factors. Skin antisepsis was changed from povidone-iodine to chlorhexidine-alcohol. Compliance with choice of antibiotic prophylaxis increased from 89.6% in 2014 to 98.5% in 2015. Compliance with timing also improved. The SSI rate of 7.5% was the lowest recorded to date, with the majority of SSIs (64%) diagnosed after hospital discharge. The level of variation was also reduced. However, the continued presence of variation and possibility of lower infection rates from the literature imply that further improvements are required.

  10. DNA methylation of specific CpG sites in the promoter region regulates the transcription of the mouse oxytocin receptor.

    Directory of Open Access Journals (Sweden)

    Shimrat Mamrut

    Full Text Available Oxytocin is a peptide hormone, well known for its role in labor and suckling, and most recently for its involvement in mammalian social behavior. All central and peripheral actions of oxytocin are mediated through the oxytocin receptor, which is the product of a single gene. Transcription of the oxytocin receptor is subject to regulation by gonadal steroid hormones, and is profoundly elevated in the uterus and mammary glands during parturition. DNA methylation is a major epigenetic mechanism that regulates gene transcription, and has been linked to reduced expression of the oxytocin receptor in individuals with autism. Here, we hypothesized that transcription of the mouse oxytocin receptor is regulated by DNA methylation of specific sites in its promoter, in a tissue-specific manner. Hypothalamus-derived GT1-7, and mammary-derived 4T1 murine cell lines displayed negative correlations between oxytocin receptor transcription and methylation of the gene promoter, and demethylation caused a significant enhancement of oxytocin receptor transcription in 4T1 cells. Using a reporter gene assay, we showed that methylation of specific sites in the gene promoter, including an estrogen response element, significantly inhibits transcription. Furthermore, methylation of the oxytocin receptor promoter was found to be differentially correlated with oxytocin receptor expression in mammary glands and the uterus of virgin and post-partum mice, suggesting that it plays a distinct role in oxytocin receptor transcription among tissues and under different physiological conditions. Together, these results support the hypothesis that the expression of the mouse oxytocin receptor gene is epigenetically regulated by DNA methylation of its promoter.

  11. Management of low-level radioactive waste in the southeast compact region: Final report: Volume 3, Siting methodology

    International Nuclear Information System (INIS)

    1985-07-01

    This report is a part of the designation process and provides technical criteria and procedures for use in the designation process. It also provides information related to data sources and methodology for applying the criteria. As part of the designation process, the Commissioners will weight the recommended criteria to reflect the relative importance of the various considerations to the goal of providing facilities that will allow for the safe, environmentally sound, and cost-effective management of low-level radioactive waste in the Southeast Region. One possible method for accomplishing this weighting is described in this report

  12. Earliest isotopic evidence in the Maya region for animal management and long-distance trade at the site of Ceibal, Guatemala.

    Science.gov (United States)

    Sharpe, Ashley E; Emery, Kitty F; Inomata, Takeshi; Triadan, Daniela; Kamenov, George D; Krigbaum, John

    2018-04-03

    This study uses a multiisotope (carbon, nitrogen, oxygen, and strontium) approach to examine early animal management in the Maya region. An analysis of faunal specimens across almost 2,000 years (1000 BC to AD 950) at the site of Ceibal, Guatemala, reveals the earliest evidence for live-traded dogs and possible captive-reared taxa in the Americas. These animals may have been procured for ceremonial functions based on their location in the monumental site core, suggesting that animal management and trade began in the Maya area to promote special events, activities that were critical in the development of state society. Isotopic evidence for animal captivity at Ceibal reveals that animal management played a greater role in Maya communities than previously believed. Copyright © 2018 the Author(s). Published by PNAS.

  13. Mineralogy, geochemistry, porosity and redox properties of rocks from Forsmark. Compilation of data from the regional model volume for SR-Site

    Energy Technology Data Exchange (ETDEWEB)

    Sandstroem, Bjoern (WSP Sverige AB, Stockholm (Sweden)); Stephens, Michael B. (Geological Survey of Sweden, Uppsala (Sweden))

    2009-11-15

    This report is a compilation of the data acquired during the Forsmark site investigation programme on the mineralogy, geochemistry, redox properties and porosity of different rock types at Forsmark. The aim is to provide a final summary of the available data for use during the SR-Site modelling work. Data presented in this report represent the regional model volume and have previously been published in various SKB reports. The data have been extracted from the SKB database Sicada and are presented as calculated median values, data range and lower/upper quartile. The representativity of all samples used for the calculations have been evaluated and data from samples where there is insufficient control on the rock type have been omitted. Rock samples affected by alteration have been omitted from the unaltered samples and are presented separately based on type of alteration (e.g. oxidised or albitized rock)

  14. ECOLOGICAL STRUCTURE OF ORIBATID MITE COMMUNITIES IN ACER PLATANOIDES L. STAND ON THE REMEDIATED SITE OF PAVLOGRADSKAYA MINE (PAVLOGRAD, THE DNIPROPETROVSK REGION

    Directory of Open Access Journals (Sweden)

    Y. L. Kulbachko

    2014-04-01

    Full Text Available Species composition and features of ecological structure of oribatid mite communities were studied on various options of bulk artificial-mixed soil in Acer platanoides L. stand growing on the remediated site of Pavlogradskaya mine (Pavlograd, Dnipropetrovsk Region. The ecological structure of oribatid population generally was damaged and this is typical for the man-modified ecosystems. Oribatid mite density in maple litter was higher than in the top layer of bulk soil (loess loam and chernozem by 4.1–7.4 times. Species abundance of oribatid mite was almost equal in maple litter and bulk soil. Punctoribates liber Pavlitshenko, 1991 prevailed generally as eudominant species in oribatid mite structure in Acer platanoides stand. The representatives of unspecialized life-forms were dominated among the oribatid life-forms in the remediated site with chernozem bulk. Key words: oribatid mites, forest remediation, mine dumps.

  15. A recurrent human papillomavirus integration site at chromosome region 12q14-q15 in SW756 and SK-v cell lines derived from genital tumors

    International Nuclear Information System (INIS)

    Sastre-Garau, X.; Couturier, J.; Favre, M.; Orth, G.

    1995-01-01

    The SW756 cell line, derived from an invasive cancer of the uterine cervix, harbours integrated human papillomavirus (HPV) 18 DNA sequences which have been located in chromosome band 12q13. By in situ hybridization experiments with tritiated and digoxigenin-labelled HPV18 probes on R-banded chromosomes, we now localize the integrated viral sequences in 12q14-q15. Interestingly, we have previously localized integrated HPV16 sequences in the same chromosomal region in SK-v cells, derived from a pre-invasive vulvar neoplasia. The chromosomal region 12q14-q15 could thus correspond to a preferential site for the integration of HPV DNA in genital tumors. (authors). 29 refs., 2 figs

  16. Effect of nuclear explosions at Lobnor test site and after Chernobyl accident on the environment and population health in Almaty region

    International Nuclear Information System (INIS)

    Zhilkaidarova, A.Zh.; Pozdnyakova, A.P.; Mit, A.A.; Chastnikov, I.Ya.; Sadukov, A.A.; Khusainova, Sh.N.

    1999-01-01

    This paper [1] presents correlation of infantile death rate, oncologic sickness children and nuclear explosions at Lobnor test site and Chernobyl accident.Figure 1 presents information about accumulation of radionuclides (α-emitter) in poplar-tree of Dzharkent-city within the last 15 years [2].Figure 2 presents the relation of infantile death rate in districts of Almaty region, located at different distances from the boundary with China. (Data were obtained from the regional children's hospital of Almaty).Figure 3 presents values of oncologic sickness rate for children living in Almaty, who are 0-14 years old.Numerous observations of irradiated people show that malignant tumours, induced by ionizing radiation, emerge in several years after the irradiation

  17. Distribution and health risk assessment of trace metals in freshwater tilapia from three different aquaculture sites in Jelebu Region (Malaysia).

    Science.gov (United States)

    Low, Kah Hin; Zain, Sharifuddin Md; Abas, Mhd Radzi; Md Salleh, Kaharudin; Teo, Yin Yin

    2015-06-15

    The trace metal concentrations in edible muscle of red tilapia (Oreochromis spp.) sampled from a former tin mining pool, concrete tank and earthen pond in Jelebu were analysed with microwave assisted digestion-inductively coupled plasma-mass spectrometry. Results were compared with established legal limits and the daily ingestion exposures simulated using the Monte Carlo algorithm for potential health risks. Among the metals investigated, arsenic was found to be the key contaminant, which may have arisen from the use of formulated feeding pellets. Although the risks of toxicity associated with consumption of red tilapia from the sites investigated were found to be within the tolerable range, the preliminary probabilistic estimation of As cancer risk shows that the 95th percentile risk level surpassed the benchmark level of 10(-5). In general, the probabilistic health risks associated with ingestion of red tilapia can be ranked as follows: former tin mining pool > concrete tank > earthen pond. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Prospects for regional groundwater contamination due to karst landforms in Mescalero caliche at the WIPP site near Carlsbad, New Mexico

    International Nuclear Information System (INIS)

    Phillips, R.H.

    1987-01-01

    Plutonium from nuclear weapons production will be permanently buried in Permian salt beds at the Waste Isolation Pilot Plant (WIPP), located in the Nash Draw watershed. Overlying the salt beds are cavernous Rustler dolomite aquifers, the most likely flow paths for contaminated water from WIPP to the biosphere. Overlying the Rustler are sandstones, siltstones, Mescalero caliche, and windblown sand. The WIPP site contains thousands of closed topographic depressions. If some are karst features, the ability of WIPP to isolate nuclear waste cannot be demonstrated. A water balance and geochemical analysis of the Nash Draw watershed and nearby brine springs were undertaken to determine: (1) which Rustler aquifers discharge where, and in what quantities; (2) the rates of evapotranspiration and natural groundwater recharge; (3) the most likely discharge point for contaminated water from WIPP. Laguna Grande, a natural salt lake in Nash Draw, is the outlet for the Rustler dolomite aquifers and for plutonium contaminations from WIPP. The recharge time for the Rustler may be only 6 to 8 years. WIPP is unsuitable for nuclear waste isolation because: (1) Rustler groundwater flow paths and travel times are inherently unpredictable; (2) caliche and sandstones allow rainwater recharge of the Rustler; (3) pressurized brine underneath WIPP can carry dissolved waste up the WIPP shafts to the Rustler; (4) geologic barriers between the brine and WIPP are unreliable; and (5) WIPP is vulnerable to human intrusion

  19. Crystallographic Characterization of Uranium-Thorium Rocks and Impacts on Water Pollution in some Tranomaro- Anosy region sites

    International Nuclear Information System (INIS)

    Sahoa, F.E.

    2015-01-01

    Heavy metal contamination of artificial lakes water has been investigated in the Tranomaro mining sites combining crystallographic and analytical chemistry approaches. On one hand, X-ray diffraction analysis of the samples has shown the presence of thorianite (ThO 2 ) in a simple cubic crystalline system whereas uranium oxides are present in multiphase systems as α-uraninite, β-uraninite and τ-uraninite.Heavy metals concentrations were determined by using ICP-MS technique in mineral and water samples. Results show high level of heavy metals in minerals otherwise low level far beyond the guideline values recommended by international organizations in water samples. This fact can be explained by the adsorption and the coprecipitation phenomena that may take place due to the presence of complexes such as sulfates and carbonates.The accumulation of ETM in minerals in excessive levels represents a potential risk to the aquatic ecosystem by leaching of these elements at the slightest change in the physicochemical conditions of the environment. [fr

  20. Thyroid abnormality trend over time in northeastern regions of Kazakstan, adjacent to the Semipalatinsk nuclear test site. A case review of pathological findings for 7271 patients

    International Nuclear Information System (INIS)

    Zhumadilov, Z.; Gusev, B.I.; Takada, Jun; Hoshi, Masaharu; Kimura, Akiro; Hayakawa, Norihiko; Takeichi, Nobuo

    2000-01-01

    From 1949 through 1989 nuclear weapons testing carried out by the former Soviet Union at the Semipalatinsk Nuclear Test Site (SNTS) resulted in local fallout affecting the residents of Semipalatinsk, Ust-Kamenogorsk and Pavlodar regions of Kazakstan. To investigate the possible relationship between radiation exposure and thyroid gland abnormalities, we conducted a case review of pathological findings of 7271 urban and rural patients who underwent surgery from 1966-96. Of the 7271 patients, 761 (10.5%) were men, and 6510 (89.5%) were women. The age of the patients varied from 15 to 90 years. Overall, a diagnosis of adenomatous goiter (most frequently multinodular) was found in 1683 patients (63.4%) of Semipalatinsk region, in 2032 patients (68.6%) of Ust-Kamenogorsk region and in 1142 patients (69.0%) of Pavlodar region. In the period 1982-96, as compared before, there was a noticeable increase in the number of cases of Hashimoto's thyroiditis and thyroid cancer. Among histological forms of thyroid cancer, papillary (48.1%) and follicular (33.1%) predominated in the Semipalatinsk region. In later periods (1987-96), an increased frequency of abnormal cases occurred among patients less than 40 years of age, with the highest proportion among patients below 20 in Semipalatinsk and Ust-Kamenogorsk regions of Kazakstan. Given the positive findings of a significant cancer-period interaction, and a significant trend for the proportion of cancer to increase over time, we recommend more detailed and etiologic studies of thyroid disease among populations exposed to radiation fallout from the SNTS in comparison to non-exposed population. (author)

  1. Thyroid abnormality trend over time in northeastern regions of Kazakstan, adjacent to the Semipalatinsk nuclear test site. A case review of pathological findings for 7271 patients

    Energy Technology Data Exchange (ETDEWEB)

    Zhumadilov, Z. [Semipalatinsk State Medical Academy (Kazakstan); Gusev, B.I.; Takada, Jun; Hoshi, Masaharu; Kimura, Akiro; Hayakawa, Norihiko; Takeichi, Nobuo

    2000-03-01

    From 1949 through 1989 nuclear weapons testing carried out by the former Soviet Union at the Semipalatinsk Nuclear Test Site (SNTS) resulted in local fallout affecting the residents of Semipalatinsk, Ust-Kamenogorsk and Pavlodar regions of Kazakstan. To investigate the possible relationship between radiation exposure and thyroid gland abnormalities, we conducted a case review of pathological findings of 7271 urban and rural patients who underwent surgery from 1966-96. Of the 7271 patients, 761 (10.5%) were men, and 6510 (89.5%) were women. The age of the patients varied from 15 to 90 years. Overall, a diagnosis of adenomatous goiter (most frequently multinodular) was found in 1683 patients (63.4%) of Semipalatinsk region, in 2032 patients (68.6%) of Ust-Kamenogorsk region and in 1142 patients (69.0%) of Pavlodar region. In the period 1982-96, as compared before, there was a noticeable increase in the number of cases of Hashimoto's thyroiditis and thyroid cancer. Among histological forms of thyroid cancer, papillary (48.1%) and follicular (33.1%) predominated in the Semipalatinsk region. In later periods (1987-96), an increased frequency of abnormal cases occurred among patients less than 40 years of age, with the highest proportion among patients below 20 in Semipalatinsk and Ust-Kamenogorsk regions of Kazakstan. Given the positive findings of a significant cancer-period interaction, and a significant trend for the proportion of cancer to increase over time, we recommend more detailed and etiologic studies of thyroid disease among populations exposed to radiation fallout from the SNTS in comparison to non-exposed population. (author)

  2. The Importance of Field Demonstration Sites: The View from the Unconventional Resource Region of the Appalachian Basin

    Science.gov (United States)

    Carr, T.

    2017-12-01

    The Appalachian basin with the Marcellus and Utica shale units is one of the most active unconventional resource plays in North America. Unconventional resource plays are critical and rapidly-growing areas of energy, where research lags behind exploration and production activity. There remains a poor overall understanding of physical, chemical and biological factors that control shale gas production efficiency and possible environmental impacts associated with shale gas development. We have developed an approach that works with local industrial partners and communities and across research organizations. The Marcellus Shale Energy and Environment Laboratory (MSEEL) consists of a multidisciplinary and multi-institutional team undertaking integrated geoscience, engineering and environmental studies in cooperation with the Department of Energy. This approach is being expanded to other sites and to the international arena. MSEEL consists of four horizontal production wells, which are instrumented, a cored and logged vertical pilot bore-hole, and a microseismic observation well. MSEEL has integrated geophysical observations (microseismic and surface), fiber-optic monitoring for distributed acoustic (DAS) and temperature sensing (DTS), well logs, core data and production logging and continued monitoring, to characterize subsurface rock properties, and the propagation pattern of induced fractures in the stimulated reservoir volume. Significant geologic heterogeneity along the lateral affects fracture stimulation efficiency - both completion efficiency (clusters that receive effective stimulation), and production efficiency (clusters effectively contributing to production). MSEEL works to develop new knowledge of subsurface geology and engineering, and surface environmental impact to identify best practices that can optimize hydraulic fracture stimulation to increase flow rates, estimated ultimate recovery in order to reduce the number of wells and environmental impact.

  3. Performance of statistical process control methods for regional surgical site infection surveillance: a 10-year multicentre pilot study.

    Science.gov (United States)

    Baker, Arthur W; Haridy, Salah; Salem, Joseph; Ilieş, Iulian; Ergai, Awatef O; Samareh, Aven; Andrianas, Nicholas; Benneyan, James C; Sexton, Daniel J; Anderson, Deverick J

    2017-11-24

    Traditional strategies for surveillance of surgical site infections (SSI) have multiple limitations, including delayed and incomplete outbreak detection. Statistical process control (SPC) methods address these deficiencies by combining longitudinal analysis with graphical presentation of data. We performed a pilot study within a large network of community hospitals to evaluate performance of SPC methods for detecting SSI outbreaks. We applied conventional Shewhart and exponentially weighted moving average (EWMA) SPC charts to 10 previously investigated SSI outbreaks that occurred from 2003 to 2013. We compared the results of SPC surveillance to the results of traditional SSI surveillance methods. Then, we analysed the performance of modified SPC charts constructed with different outbreak detection rules, EWMA smoothing factors and baseline SSI rate calculations. Conventional Shewhart and EWMA SPC charts both detected 8 of the 10 SSI outbreaks analysed, in each case prior to the date of traditional detection. Among detected outbreaks, conventional Shewhart chart detection occurred a median of 12 months prior to outbreak onset and 22 months prior to traditional detection. Conventional EWMA chart detection occurred a median of 7 months prior to outbreak onset and 14 months prior to traditional detection. Modified Shewhart and EWMA charts additionally detected several outbreaks earlier than conventional SPC charts. Shewhart and SPC charts had low false-positive rates when used to analyse separate control hospital SSI data. Our findings illustrate the potential usefulness and feasibility of real-time SPC surveillance of SSI to rapidly identify outbreaks and improve patient safety. Further study is needed to optimise SPC chart selection and calculation, statistical outbreak detection rules and the process for reacting to signals of potential outbreaks. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights

  4. Temporal characterization and regional contribution to O{sub 3} and NO{sub x} at an urban and a suburban site in Nanjing, China

    Energy Technology Data Exchange (ETDEWEB)

    Xie, Min, E-mail: minxie@nju.edu.cn; Zhu, Kuanguang; Wang, Tijian, E-mail: tjwang@nju.edu.cn; Chen, Pulong; Han, Yong; Li, Shu; Zhuang, Bingliang; Shu, Lei

    2016-05-01

    To improve our understanding of the interplay among local and regional photochemical pollutants in the typical city of the Yangtze River Delta (YRD) region, the concurrent observation of O{sub 3} and NO{sub x} concentrations at an urban and a suburban site in Nanjing during 2008 is presented. In general, the annual mean O{sub 3} concentration is 2.35 ppbv lower in the downtown than at suburban due to higher NO{sub x} pollution levels correlated with heavy traffic. At both sites, O{sub 3} shows a distinct seasonality with the spring maximum and the winter minimum, while the minimum concentration of NO{sub x} appears in summertime. Besides the chemical processes of O{sub 3} sensitivity in the daytime and the NO{sub x} titration at night, meteorological conditions also play an essential role in these monthly and diurnal variations. The ozone weekend effect that can be attributed to the weekly routine of human activities is observed in the urban atmosphere of Nanjing as well, with O{sub 3} concentrations 2.09 ppbv higher and NO{sub x} concentrations 6.20 ppbv lower on weekends than on weekdays. The chemical coupling of NO, NO{sub 2} and O{sub 3} is investigated to show that the OX-component (O{sub 3} and NO{sub 2}) partitioning point occurs at about 35 ppbv for NO{sub x}, with O{sub 3} being the dominant form at lower levels and NO{sub 2} dominating at higher levels. And it is also discovered that the level of OX is made up of two contributions, including the regional contribution affected by regional background O{sub 3} level and the local contribution correlated with the level of primary pollution. The diurnal peak of regional contribution appears 2–5 h after the peak of local contribution, implying that OX in Nanjing might prominently affected by the pollutants from a short distance. The highest regional contribution and the second highest local contribution lead to the spring peak of O{sub 3} observed in Nanjing, whereas the highest local contribution and the

  5. A plant taxonomic survey of the Uranium City region, Lake Athabasca north shore, emphasizing the naturally colonizing plants on uranium mine and mill wastes and other human-disturbed sites

    International Nuclear Information System (INIS)

    Harms, V.L.

    1982-07-01

    A goal of this study was to acquire more complete baseline data on the existing flora of the Uranium City region, both in natural and human-disturbed sites. Emphasis was given to determining which plant species were naturally revegetating various abandoned uranium mine and mill waste disposal areas, other human-disturbed sites, and ecologically analogous sites. Another goal was to document the occurrence and distribution in the study region of rare and possibly endangered species. A further objective was to suggest regionally-occurring species with potential value for revegetating uranium mine and mill waste sites. Field investigations were carried out in the Uranium City region during August, 1981. During this time 1412 plant collections were made; a total of 366 plant species - trees, shrubs, forbs, graminoids, lichens, and bryophytes were recorded. The report includes an annotated checklist of plant species of the Uranium City region and a reference index of plant taxa indicating species that have high revegetation potential

  6. SYNONYMS IN GERMAN ONLINE MONOLINGUAL DICTIONARIES

    Directory of Open Access Journals (Sweden)

    Paloma Sánchez Hernández

    2017-03-01

    Full Text Available This study includes both theoretical and qualitative research and falls within the framework of semantics and lexicography. It is based on work conducted as a part of the COMBIDIGILEX research project: MINECO-FEDER FFI2015-64476-P. The lexicographical description proposed in the COMBIDIGILEX project is based on the foundations of bilingual lexicography from an onomasiological perspective, including paradigmatic information and syntagmatic analysis, which is useful to users creating texts for students at an advanced level. The project analyses verbal lexemes in German and Spanish based on a paradigmatic, syntagmatic, orthographic and morphological perspective (among others. Subsequently, a contrastive analysis was conducted between both languages. In this contribution, we first analyse what paradigmatic information is, including its relevance to a dictionary. Paradigmatic information includes not only synonyms and antonyms but also hyperonyms and hyponyms, which often complete the lexicographical article in a general dictionary. Paradigmatic relations can be observed in light of semantic definitions or may independently become part of the lexical entry. Forming the paradigmatic information of an entry in an independent manner is known as “intentionelle Paradigmatik”, and it constitutes a series of advantages in the dictionary (Hausmann 1991b: 2794. This type of information aids the processes of production and expands vocabulary. Next, we examine the appearance of synonyms in three German online monolingual dictionaries – DWDS, WORTSCHATZLEXIKON and DUDEN ONLINE – from the semantic perspective of cognition verbs. The primary objective of the study is to demonstrate the relevance of this type of information as well as the needs it covers from a user’s perspective. Offering the user a series of lexical elements along with information on semantic relations of a paradigmatic nature thus addresses the issue of users having an array of

  7. Scaling up of Carbon Exchange Dynamics from AmeriFlux Sites to a Super-Region in the Eastern United States

    Energy Technology Data Exchange (ETDEWEB)

    Hans Peter Schmid; Craig Wayson

    2009-05-05

    The primary objective of this project was to evaluate carbon exchange dynamics across a region of North America between the Great Plains and the East Coast. This region contains about 40 active carbon cycle research (AmeriFlux) sites in a variety of climatic and landuse settings, from upland forest to urban development. The core research involved a scaling strategy that uses measured fluxes of CO{sub 2}, energy, water, and other biophysical and biometric parameters to train and calibrate surface-vegetation-atmosphere models, in conjunction with satellite (MODIS) derived drivers. To achieve matching of measured and modeled fluxes, the ecosystem parameters of the models will be adjusted to the dynamically variable flux-tower footprints following Schmid (1997). High-resolution vegetation index variations around the flux sites have been derived from Landsat data for this purpose. The calibrated models are being used in conjunction with MODIS data, atmospheric re-analysis data, and digital land-cover databases to derive ecosystem exchange fluxes over the study domain.

  8. Premodelling of the importance of the location of the upstream hydraulic boundary of a regional flow model of the Laxemar-Simpevarp area. Site descriptive modelling SDM-Site Laxemar

    International Nuclear Information System (INIS)

    Holmen, Johan G.

    2008-03-01

    The location of the westernmost hydraulic boundary of a regional groundwater flow model representing the Laxemar investigation area is of importance as the regional flow of groundwater is primarily from the west towards the sea (as given by the regional topography). If the westernmost boundary condition of a regional flow model is located to close to the investigation area, the regional flow model may underestimate the magnitude of the regional groundwater flow (at the investigation area), as well as overestimate breakthrough times of flow paths from the repository area, etc. Groundwater flows have been calculated by use of two mathematical (numerical) models: A very large groundwater flow model, much larger than the regional flow model used in the Laxemar site description version 1.2, and a smaller flow model that is of a comparable size to the regional model used in the site description. The models are identical except for the different horizontal extensions of the models; the large model extends to the west much further than the small model. The westernmost lateral boundary of the small model is a topographic water divide approx. 7 km from the central parts of the Laxemar investigation area, and the westernmost lateral boundary of the large model is a topographic water divide approx. 40 km from the central parts of the Laxemar investigation area. In the models the lateral boundaries are defined as no-flow boundaries. The objective of the study is to calculate and compare the groundwater flow properties at a tentative repository area at Laxemar; by use of a large flow model and a small flow model. The comparisons include the following three parameters: - Length of flow paths from the tentative repository area. - Advective breakthrough time for flow paths from the tentative repository area. - Magnitude of flow at the tentative repository area. The comparisons demonstrated the following considering the median values of the obtained distributions of flow paths

  9. Application of trajectory clustering and source attribution methods for investigating regional CO2 and CH4 concentrations at Germany's highest mountain site

    Science.gov (United States)

    Giemsa, Esther; Jacobeit, Jucundus; Ries, Ludwig; Frank, Gabriele; Hachinger, Stephan; Meyer-Arnek, Julian

    2017-04-01

    Carbon dioxide (CO2) and methane (CH4) represent the most important contributors to increased radiative forcing enhancing it together by contemporary 2.65 W/m2 on the global average (IPCC 2013). The unbroken increase of atmospheric greenhouse gases (GHG) has been unequivocally attributed to human emissions mainly coming from fossil fuel burning and land-use changes, while the oceans and terrestrial ecosystems slightly attenuate this rise with seasonally varying strength. Short-term fluctuations in the GHG concentrations that superimpose the seasonal cycle and the climate change driven trend reflect the presence of regional sources and sinks. A perfect place for investigating the comprehensive influence of these regional emissions is provided by the Environmental Research Station Schneefernerhaus (47.42°N, 10.98°E, 2.650m a.s.l.) situated in the eastern Alps at the southern side of Zugspitze mountain. Located just 300m below the highest peak of the German Alps, the exposed site is one of the currently 30 global core sites of the World Meteorological Organisation (WMO) Global Atmosphere Watch (GAW) programme and thus provides ideal conditions to study source-receptor relationships for greenhouse gases. We propose a stepwise statistical methodology for examining the relationship between synoptic-scale atmospheric transport patterns and climate gas mole fractions to finally receive a characterization of the sampling site with regard to the key processes driving CO2 and CH4 concentration levels. The first step entails a reliable radon-based filtering approach to subdivide the detected air masses according to their regional or 'background' origin. Simultaneously, a large number of ten-day back-trajectories from Schneefernerhaus every two hours over the entire study period 2011 - 2015 is calculated with the Lagrangian transport and dispersion model FLEXPART (Stohl et al. 2005) and subjected to cluster analysis. The weather- and emission strength-related (short

  10. Slope Stability Analysis of Mountainous/Hilly regions of Nepal: A case study of Bhotekoshi Hydropower site

    Science.gov (United States)

    Acharya, A.; Gautam, S.; Kafle, K. R.

    2017-12-01

    Nepal is a mountainous, developing country that straddles the boundary between the Indian and Himalayan tectonic plates. In Nepal, landslides represent a major constraint on development, causing high levels of economic loss and substantial number of fatalities each year. There is a general consensus that the impacts of landslides in mountainous countries such as Nepal are increasing with time due to unstable slopes. The present study deals with the field investigation of slope stability in mountainous/hilly region of Nepal. Among the natural hazards that occur in regularly in Nepal, flood and landslides due to unstable slopes are by far the serious ones. They claim many human lives every year and cause other damages such as destruction and blockage of highway, destruction of hydropower, losses of livestock, crops and agricultural land. Slope Mass Rating system and stereographic projection has been carried out for analysis of slope stability using standard formats and parameters. It has been found that there are few major discontinuities that play the role for the rock/soil slides around the area. The major discontinuities are 235°/67°. These joint sets play the main role to the plane as well as wedge failures around the area. The rock mass rating of the slope has been found to be 27 and the slope mass rating has been found to be 37.8. The obtained slope mass rating value lies on IV class (Bad) that represents unstable slope having planner or big wedge failure and needs to be corrective measures in the slope. From stereographic projection, wedge failure of the slope has been seen according to the conditions of slope failure.

  11. Adenovirus delivered short hairpin RNA targeting a conserved site in the 5' non-translated region inhibits all four serotypes of dengue viruses.

    Directory of Open Access Journals (Sweden)

    Anil Babu Korrapati

    Full Text Available BACKGROUND: Dengue is a mosquito-borne viral disease caused by four closely related serotypes of Dengue viruses (DENVs. This disease whose symptoms range from mild fever to potentially fatal haemorrhagic fever and hypovolemic shock, threatens nearly half the global population. There is neither a preventive vaccine nor an effective antiviral therapy against dengue disease. The difference between severe and mild disease appears to be dependent on the viral load. Early diagnosis may enable timely therapeutic intervention to blunt disease severity by reducing the viral load. Harnessing the therapeutic potential of RNA interference (RNAi to attenuate DENV replication may offer one approach to dengue therapy. METHODOLOGY/PRINCIPAL FINDINGS: We screened the non-translated regions (NTRs of the RNA genomes of representative members of the four DENV serotypes for putative siRNA targets mapping to known transcription/translation regulatory elements. We identified a target site in the 5' NTR that maps to the 5' upstream AUG region, a highly conserved cis-acting element essential for viral replication. We used a replication-defective human adenovirus type 5 (AdV5 vector to deliver a short-hairpin RNA (shRNA targeting this site into cells. We show that this shRNA matures to the cognate siRNA and is able to inhibit effectively antigen secretion, viral RNA replication and infectious virus production by all four DENV serotypes. CONCLUSION/SIGNIFICANCE: The data demonstrate the feasibility of using AdV5-mediated delivery of shRNAs targeting conserved sites in the viral genome to achieve inhibition of all four DENV serotypes. This paves the way towards exploration of RNAi as a possible therapeutic strategy to curtail DENV infection.

  12. Four new synonyms and a new combination in Parnassia (Celastraceae

    Directory of Open Access Journals (Sweden)

    Yumin Shu

    2017-03-01

    Full Text Available Parnassia yunnanensis had been previously described based on mixed specimens containing materials partially belonging to P. cacuminum, which makes the application of P. yunnanensis ambiguous. Therefore, we lectotypified P. yunnanensis and meanwhile synonymized P. lanceolata var. oblongipetala under it. P. yunnanensis var. longistipitata was found more similar to P. cacuminum rather than P. yunnanensis, thus a new combination, P. cacuminum var. longistipitata comb. nov. was proposed. Furthermore, other three names (P. vevusta, P. degeensis and P. kangdingensis were reduced to synonyms of P. cacuminum too.

  13. Four new synonyms and a new combination in Parnassia (Celastraceae).

    Science.gov (United States)

    Shu, Yumin; Zhang, Zhixiang

    2017-01-01

    Parnassia yunnanensis had been previously described based on mixed specimens containing materials partially belonging to Parnassia cacuminum , which makes the application of Parnassia yunnanensis ambiguous. Therefore, we lectotypified Parnassia yunnanensis and meanwhile synonymized Parnassia lanceolata var. oblongipetala under it. Parnassia yunnanensis var. longistipitata was found more similar to Parnassia cacuminum rather than Parnassia yunnanensis , thus a new combination, Parnassia cacuminum var. longistipitata comb. nov. was proposed. Furthermore, other three names ( Parnassia vevusta , Parnassia degeensis and Parnassia kangdingensis ) were reduced to synonyms of Parnassia cacuminum too.

  14. Oskarshamn site investigation. Searching for evidence of late- or post-glacial faulting in the Oskarshamn region. Results from 2004

    International Nuclear Information System (INIS)

    Lagerbaeck, Robert; Sundh, Martin; Svantesson, Sven-Ingemund; Svedlund, Jan-Olov

    2005-11-01

    In connection with previous aerial photo interpretation, a number of prominent escarpments, hypothetically indicative of late- or postglacial faulting, were noted in the mainland part of the investigation area. Most of these scarps were field-checked in 2004 and found to be more or less intensely glacially abraded, i.e. formed prior to the last deglaciation. On the island of Oeland a very distinct, straight lineament was likewise noticed in connection with aerial photo interpretation. In the field the lineament was identified as a step in the ground surface or as a very distinct vegetational boundary, the latter due to a difference in thickness of the soil cover on either side of the lineament. The step in the ground surface clearly derives from a bedrock scarp but it was not possible to determine its nature or age in the absence of stratigraphical information. No systematic search for unstable boulders, tentatively refuting the occurrence of major earthquakes in the vicinity, was carried out, but a few specimens were encountered during minor excursions in different parts of the investigation area. However, without estimating how much earthquake-induced ground motion these boulders could withstand before they would topple over, it is difficult to judge their significance as palaeo-earthquake indicators. Stratigraphical investigations in machine-dug trenches were carried out at three localities along the Faarbo esker, all situated west of the candidate area at Simpevarp. A total of some 170 m of trenches were excavated and investigated. Deposits of loosely packed sand and coarse silt were encountered in almost all the trenches and in some of them a clayey bed covered the sandy-silty deposits. When shaken by strong earthquakes in a water saturated state, such deposits are highly likely to liquefy but no significant features related to liquefaction were noted in any of the trenches. However, as the excavation sites are situated some 30-100 m above the present sea

  15. Oskarshamn site investigation. Searching for evidence of late- or post-glacial faulting in the Oskarshamn region. Results from 2004

    Energy Technology Data Exchange (ETDEWEB)

    Lagerbaeck, Robert; Sundh, Martin; Svantesson, Sven-Ingemund; Svedlund, Jan-Olov [Geological Survey of Sweden (SGU), Uppsala (Sweden)

    2005-11-15

    In connection with previous aerial photo interpretation, a number of prominent escarpments, hypothetically indicative of late- or postglacial faulting, were noted in the mainland part of the investigation area. Most of these scarps were field-checked in 2004 and found to be more or less intensely glacially abraded, i.e. formed prior to the last deglaciation. On the island of Oeland a very distinct, straight lineament was likewise noticed in connection with aerial photo interpretation. In the field the lineament was identified as a step in the ground surface or as a very distinct vegetational boundary, the latter due to a difference in thickness of the soil cover on either side of the lineament. The step in the ground surface clearly derives from a bedrock scarp but it was not possible to determine its nature or age in the absence of stratigraphical information. No systematic search for unstable boulders, tentatively refuting the occurrence of major earthquakes in the vicinity, was carried out, but a few specimens were encountered during minor excursions in different parts of the investigation area. However, without estimating how much earthquake-induced ground motion these boulders could withstand before they would topple over, it is difficult to judge their significance as palaeo-earthquake indicators. Stratigraphical investigations in machine-dug trenches were carried out at three localities along the Faarbo esker, all situated west of the candidate area at Simpevarp. A total of some 170 m of trenches were excavated and investigated. Deposits of loosely packed sand and coarse silt were encountered in almost all the trenches and in some of them a clayey bed covered the sandy-silty deposits. When shaken by strong earthquakes in a water saturated state, such deposits are highly likely to liquefy but no significant features related to liquefaction were noted in any of the trenches. However, as the excavation sites are situated some 30-100 m above the present sea

  16. The C-terminal region of Rad52 is essential for Rad52 nuclear and nucleolar localization, and accumulation at DNA damage sites immediately after irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Koike, Manabu, E-mail: m_koike@nirs.go.jp [DNA Repair Gene Res., National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba 263-8555 (Japan); Yutoku, Yasutomo [DNA Repair Gene Res., National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba 263-8555 (Japan); Graduate School of Science, Chiba University, Yayoicho, Inage-ku, Chiba 263-8522 (Japan); Koike, Aki [DNA Repair Gene Res., National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba 263-8555 (Japan)

    2013-05-31

    Highlights: •Rad52 might play a key role in the repair of DSB immediately after irradiation. •EYFP-Rad52 accumulates rapidly at DSB sites and colocalizes with Ku80. •Accumulation of Rad52 at DSB sites is independent of the core NHEJ factors. •Localization and recruitment of Rad52 to DSB sites are dependent on the Rad52 CTR. •Basic amino acids in Rad52 CTR are highly conserved among vertebrate species. -- Abstract: Rad52 plays essential roles in homologous recombination (HR) and repair of DNA double-strand breaks (DSBs) in Saccharomyces cerevisiae. However, in vertebrates, knockouts of the Rad52 gene show no hypersensitivity to agents that induce DSBs. Rad52 localizes in the nucleus and forms foci at a late stage following irradiation. Ku70 and Ku80, which play an essential role in nonhomologous DNA-end-joining (NHEJ), are essential for the accumulation of other core NHEJ factors, e.g., XRCC4, and a HR-related factor, e.g., BRCA1. Here, we show that the subcellular localization of EYFP-Rad52(1–418) changes dynamically during the cell cycle. In addition, EYFP-Rad52(1–418) accumulates rapidly at microirradiated sites and colocalizes with the DSB sensor protein Ku80. Moreover, the accumulation of EYFP-Rad52(1–418) at DSB sites is independent of the core NHEJ factors, i.e., Ku80 and XRCC4. Furthermore, we observed that EYFP-Rad52(1–418) localizes in nucleoli in CHO-K1 cells and XRCC4-deficient cells, but not in Ku80-deficient cells. We also found that Rad52 nuclear localization, nucleolar localization, and accumulation at DSB sites are dependent on eight amino acids (411–418) at the end of the C-terminal region of Rad52 (Rad52 CTR). Furthermore, basic amino acids on Rad52 CTR are highly conserved among mammalian, avian, and fish homologues, suggesting that Rad52 CTR is important for the regulation and function of Rad52 in vertebrates. These findings also suggest that the mechanism underlying the regulation of subcellular localization of Rad52 is

  17. Siting and Transportation for Consolidated Used Nuclear Fuel Management Facilities: A Proposed Approach for a Regional Initiative to Begin the Dialogue - 13562

    Energy Technology Data Exchange (ETDEWEB)

    Thrower, Alex W. [The Thrower Group LLC, Richmond, VA (United States); Janairo, Lisa [Council of State Governments-Midwestern Office, Sheboygan, WI (United States)

    2013-07-01

    The Blue Ribbon Commission on America's Nuclear Future (BRC) was formed in January 2010 to conduct a comprehensive review of policies for managing the back end of the nuclear fuel cycle, and to develop a new national strategy. Over two years, the BRC held dozens of meetings and heard from hundreds of Federal, State, Tribal, and local officials, as well as representatives of trade and labor organizations, technical groups, non-governmental organizations, and other stakeholders. The Commission's final report (issued January 26, 2012) offers a strategy to resolve longstanding challenges to responsible management of the United States' nuclear waste legacy. The Commission recommended Congressional action to rewrite parts of the Nuclear Waste Policy Act (NWPA); however, a comprehensive legislative overhaul will likely take years to fully implement. The nature and characteristics of nuclear waste, the activities that generated it, and the past history of federal efforts to manage the waste make it virtually certain that finding workable solutions will be controversial and difficult. As the BRC report suggests, this difficulty can be made insurmountable if top-down, federally-mandated efforts are forced upon unwilling States, Tribes, and local communities. Decades of effort and billions of ratepayer and taxpayer dollars have been spent attempting to site and operate spent fuel storage and disposal facilities in this manner. The experience thus far indicates that voluntary consent and active partnership of States, Tribes, and local governments in siting, designing, and operating such facilities are critical. Some States, Tribes, and local communities have indicated that, given adequate scientific and technical information, along with appropriate incentives, assurances, and authority, they might be willing to consider hosting facilities for consolidated storage and disposal of spent nuclear fuel. The authors propose a new regional approach to identifying and

  18. Siting and Transportation for Consolidated Used Nuclear Fuel Management Facilities: A Proposed Approach for a Regional Initiative to Begin the Dialogue - 13562

    International Nuclear Information System (INIS)

    Thrower, Alex W.; Janairo, Lisa

    2013-01-01

    The Blue Ribbon Commission on America's Nuclear Future (BRC) was formed in January 2010 to conduct a comprehensive review of policies for managing the back end of the nuclear fuel cycle, and to develop a new national strategy. Over two years, the BRC held dozens of meetings and heard from hundreds of Federal, State, Tribal, and local officials, as well as representatives of trade and labor organizations, technical groups, non-governmental organizations, and other stakeholders. The Commission's final report (issued January 26, 2012) offers a strategy to resolve longstanding challenges to responsible management of the United States' nuclear waste legacy. The Commission recommended Congressional action to rewrite parts of the Nuclear Waste Policy Act (NWPA); however, a comprehensive legislative overhaul will likely take years to fully implement. The nature and characteristics of nuclear waste, the activities that generated it, and the past history of federal efforts to manage the waste make it virtually certain that finding workable solutions will be controversial and difficult. As the BRC report suggests, this difficulty can be made insurmountable if top-down, federally-mandated efforts are forced upon unwilling States, Tribes, and local communities. Decades of effort and billions of ratepayer and taxpayer dollars have been spent attempting to site and operate spent fuel storage and disposal facilities in this manner. The experience thus far indicates that voluntary consent and active partnership of States, Tribes, and local governments in siting, designing, and operating such facilities are critical. Some States, Tribes, and local communities have indicated that, given adequate scientific and technical information, along with appropriate incentives, assurances, and authority, they might be willing to consider hosting facilities for consolidated storage and disposal of spent nuclear fuel. The authors propose a new regional approach to identifying and resolving issues

  19. Site-condition map for Portugal, Western Iberia: methodology and constraints on the performance of Vs30 proxies for stable continental regions in Europe.

    Science.gov (United States)

    Vilanova, S. P.; Narciso, J.; Carvalho, J. P.; Cancela, C.; Lopes, I.; Nemser, E. S.; Borges, J.

    2014-12-01

    Information on the amplification characteristics of the near-surface formations in a regional sense is essential to adequately represent both seismic hazard maps and ground shaking maps. Due to the scarceness of shear-wave velocity data in most regions, several methods have been proposed in order to obtain first order representations of Vs30. These include the surface geology method and the topographic slope method. The latter method has become the standard way for incorporating site effects into regional studies worldwide given the convenience provided by the global Vs30 Internet server. In the framework of project SCENE we developed a shear wave velocity database for Portugal. The database consists of 87 shear-wave velocity depth profiles from a variety of lithological and geological formations. We used an iterative three-step procedure to develop the Vs30 based site-condition map: 1) to define a preliminary set of geologically defined units based on the literature; 2) to calculate the distribution of Vs30 for each unit; and 3) to perform statistical tests in order to estimate the significance of the difference in the Vs30 distribution characteristics between the units. The units were merged according to the results of the statistical tests and the procedure was repeated. We started by classifying the sites into six generalized geological units. The final set consists of three units only: F1 (igneous, metamorphic and old sedimentary rocks); F2 (Neogene and Pleistocene formations); and F3 (Holocene deposits). We used the database to evaluate the performance of Vs30 proxies. The use of proxies based either on geological units or on correlations with the topographic slope shows relatively unbiased total residual distributions of the logarithm of Vs30. However, the performance of the methods varies significantly with the generalized geological unit analyzed. Both methods are biased towards lower values of Vs30 for rock formations. The topographic-slope method is

  20. Environmental Assessment for the construction and operation of the Three Rivers Solid Waste Authority regional waste management center at the Savannah River Site

    International Nuclear Information System (INIS)

    1995-12-01

    This Environmental Assessment (EA) has been prepared by the US Department of Energy (DOE) to assess the potential environmental impacts associated with the construction and operation of a landfill and technology center for regionally-generated municipal solid waste at the Savannah River Site (SRS) near Aiken, South Carolina. The facility would serve the municipal solid waste disposal needs for SRS and at least nine of the surrounding counties who currently comprise the Three Rivers Solid Waste Authority (TRSWA). Additional counties could become included in the proposed action at some future date. Current Federal and state requirements do not afford individual counties and municipalities within the region encompassing SRS the ability to efficiently or economically operate modern waste management facilities. In addition, consolidation of regional municipal solid waste at one location would have the benefit of reducing the duplicity of environmental consequences associated with the construction and operation of county-level facilities. The option to seek a combined disposal and technology development facility based on a regionally-cooperative effort was selected as a viable alternative to the existing individual SRS or county disposal activities. This document was prepared in compliance with the National Environmental Policy Act (NEPA) of 1969, as amended, the requirements of the Council on Environmental Quality Regulations for Implementing NEPA (40 CFR Part 1021). NEPA requires the assessment of environmental consequences of Federal actions that may affect the quality of the human environment. Based on the potential for impacts described for impacts described herein, DOE will either publish a Finding of No Significant Impact or prepare an environmental impact statement (EIS)

  1. The heparin-binding site in tetranectin is located in the N-terminal region and binding does not involve the carbohydrate recognition domain.

    Science.gov (United States)

    Lorentsen, R H; Graversen, J H; Caterer, N R; Thogersen, H C; Etzerodt, M

    2000-04-01

    Tetranectin is a homotrimeric plasma and extracellular-matrix protein that binds plasminogen and complex sulphated polysaccharides including heparin. In terms of primary and tertiary structure, tetranectin is related to the collectin family of Ca(2+)-binding C-type lectins. Tetranectin is encoded in three exons. Exon 3 encodes the carbohydrate recognition domain, which binds to kringle 4 in plasminogen at low levels of Ca(2+). Exon 2 encodes an alpha-helix, which is necessary and sufficient to govern the trimerization of tetranectin by assembling into a triple-helical coiled-coil structural element. Here we show that the heparin-binding site in tetranectin resides not in the carbohydrate recognition domain but within the N-terminal region, comprising the 16 amino acid residues encoded by exon 1. In particular, the lysine residues in the decapeptide segment KPKKIVNAKK (tetranectin residues 6-15) are shown to be of primary importance in heparin binding.

  2. A study in the lexicographical treatment of Arabic synonyms | Heliel ...

    African Journals Online (AJOL)

    Recently three dictionaries of Arabic synonyms were published with the aim of helping Arabic learners, writers and translators. Though Classical Arabic lexicography distinguishes itself in the field of synonymy, Modern Standard Arabic lacks reliable dictionaries in the field and hence the importance of analysing these three ...

  3. A New Synonym of Odontochilus saprophyticus (Goodyerinae: Orchidoideae: Orchidaceae

    Directory of Open Access Journals (Sweden)

    Huai-Zhen Tian

    2014-06-01

    Full Text Available Zeuxine hainanensis H. Xu, H. J. Yang & Y. D. Li is treated as a heterotypic synonym of Odontochilus saprophyticus (Aver. Ormerod in the present communication. Detailed description and relevant photographs are provided to facilitate identification of the species.

  4. Synonyms, Antonyms, and Retroactive Inhibition with Meaningful Material

    Science.gov (United States)

    Weisshed, Ethel

    1973-01-01

    The determination of the extent to which generalizations derived from studies of rote verbal learning, particularly paired-associate learning applied to highly meaningful materials, was the focus of this study. It was found that discriminating tags to synonyms and antonyms permitting the application of appropriate transfer rules may be attached.…

  5. Ancient Maya Regional Settlement and Inter-Site Analysis: The 2013 West-Central Belize LiDAR Survey

    Directory of Open Access Journals (Sweden)

    Arlen F. Chase

    2014-09-01

    Full Text Available During April and May 2013, a total of 1057 km2 of LiDAR was flown by NCALM for a consortium of archaeologists working in West-central Belize, making this the largest surveyed area within the Mayan lowlands. Encompassing the Belize Valley and the Vaca Plateau, West-central Belize is one of the most actively researched parts of the Maya lowlands; however, until this effort, no comprehensive survey connecting all settlement had been conducted. Archaeological projects have investigated at least 18 different sites within this region. Thus, a large body of archaeological research provides both the temporal and spatial parameters for the varied ancient Maya centers that once occupied this area; importantly, these data can be used to help interpret the collected LiDAR data. The goal of the 2013 LiDAR campaign was to gain information on the distribution of ancient Maya settlement and sites on the landscape and, particularly, to determine how the landscape was used between known centers. The data that were acquired through the 2013 LiDAR campaign have significance for interpreting both the composition and limits of ancient Maya political units. This paper presents the initial results of these new data and suggests a developmental model for ancient Maya polities.

  6. Cultural heritage policy. The Alto Douro wine region - World Herita-ge Site. Is there an argument for reinforcing the role of the state?

    Directory of Open Access Journals (Sweden)

    Lourenço, Lina

    2006-01-01

    Full Text Available In this paper we trace the emergence of a specific case of cultural policy: the example chosen is a UNESCO World Heritage site, namely the Alto Douro Wine Region (ADW a portuguese living and evolving cultural landscape. In order to contextualize the particularities of the means that have been adopted for the management of the ADW, we use Throsby’s (2001 typology of most commonly-used cultural heritage policy instruments. Additionally we draw on the arguments that are frequently used to support public intervention in this sphere. We conclude that ADW’s management policy should: 1 use binding agreements to operational-ize a range of measures that compensate farmers who become providers of cultural products; 2 strengthen education and information so as to promote greater physical access and personal appreciation of the ADW’s cultural goods and services; and 3 formulate an integrated set of social policies able to mitigate the negative socio-demographic trends that characterize the region and its population

  7. Visualization of glucagon secretion from pancreatic α cells by bioluminescence video microscopy: Identification of secretion sites in the intercellular contact regions

    International Nuclear Information System (INIS)

    Yokawa, Satoru; Suzuki, Takahiro; Inouye, Satoshi; Inoh, Yoshikazu; Suzuki, Ryo; Kanamori, Takao; Furuno, Tadahide; Hirashima, Naohide

    2017-01-01

    We have firstly visualized glucagon secretion using a method of video-rate bioluminescence imaging. The fusion protein of proglucagon and Gaussia luciferase (PGCG-GLase) was used as a reporter to detect glucagon secretion and was efficiently expressed in mouse pancreatic α cells (αTC1.6) using a preferred human codon-optimized gene. In the culture medium of the cells expressing PGCG-GLase, luminescence activity determined with a luminometer was increased with low glucose stimulation and KCl-induced depolarization, as observed for glucagon secretion. From immunochemical analyses, PGCG-GLase stably expressed in clonal αTC1.6 cells was correctly processed and released by secretory granules. Luminescence signals of the secreted PGCG-GLase from the stable cells were visualized by video-rate bioluminescence microscopy. The video images showed an increase in glucagon secretion from clustered cells in response to stimulation by KCl. The secretory events were observed frequently at the intercellular contact regions. Thus, the localization and frequency of glucagon secretion might be regulated by cell-cell adhesion. - Highlights: • The fused protein of proglucagon to Gaussia luciferase was used as a reporter. • The fusion protein was highly expressed using a preferred human-codon optimized gene. • Glucagon secretion stimulated by depolarization was determined by luminescence. • Glucagon secretion in α cells was visualized by bioluminescence imaging. • Glucagon secretion sites were localized in the intercellular contact regions.

  8. THE LEXICOGRAFIC PRINCIPLES OF WORD MEANINGS IN THE MULTILINGUAL SYNONYMIC DICTIONARIES

    Directory of Open Access Journals (Sweden)

    Siddikova, I.A.

    2018-03-01

    Full Text Available This article is dedicated to study of principles of description of the meaning of words in the multilingual synonymic dictionaries. The dictionary of synonyms must have full enough and absolutely explicit description of their semantic similarity and distinctions. The description can be full if it includes all existing features of the words, adequately denote every meaning and help the language learners and speakers in choosing possible meanings of synonyms owing to situation. The synonymic dictionary must include all synonyms, their meanings, lexico-semantic combination, distribution, grammatical constructions and stylistic features showing their usage in certain contexts and situations. In some cases according to their contextual meanings synonyms may be substituted depending on situation. The article is based on examples of English, Uzbek and Russian languages.

  9. Microsatellite and single nucleotide polymorphisms in the β-globin locus control region-hypersensitive Site 2: SPECIFICITY of Tunisian βs chromosomes.

    Science.gov (United States)

    Ben Mustapha, Maha; Moumni, Imen; Zorai, Amine; Douzi, Kaïs; Ghanem, Abderraouf; Abbes, Salem

    2012-01-01

    The diversity of sickle cell disease severity is attributed to several cis acting factors, among them the single nucleotide polymorphisms (SNPs) and (AT) rich region in the β-locus control region (β-LCR). This contains five DNase I hypersensitive sites (HS) located 6 to 22 kb upstream to the ϵ gene. The most important of these is the HS2 (5' β-LCR-HS2), characterized by the presence of three different SNPs and a microsatellite region known to be in association with β(S) chromosomes in various populations. The aim of this study was to present the molecular investigation of the 5' β-LCR-HS2 site in normal and sickle cell disease individuals in order to determine if there is any correlation or specificity between these molecular markers, the β(S) Tunisian chromosomes and phenotypical expression of sickle cell disease. One hundred and twenty-four chromosomes from Tunisian individuals (49 β(S) carriers and 13 normal individuals) were screened by polymerase chain reaction (PCR) and sequencing for the polymorphic short tandem microsatellite repeats (AT)(X)N(12)(AT)(Y) and the three SNPs (rs7119428, rs9736333 and rs60240093) of the 5' β-LCR-HS2. Twelve configurations of the microsatellite motif were found with an ancestral configuration elaborated by ClustalW software. Normal and mutated alleles were observed at the homozygous and heterozygous states for the three SNPs. Correlation between microsatellites and SNPs suggests that mutant SNP alleles were mainly associated, in the homozygous sickle cell disease phenotype, with the (AT)(8)N(12)GT(AT)(7) configuration, whereas, normal SNP alleles were associated with the (AT)(X)N(12)(AT)(11) configurations in normal β(A) chromosomes. The correlation of these various configurations with Hb F expression was also investigated. The principal component analysis (PCA) showed the correlation between the homozygous sickle cell disease phenotype, mutated SNP alleles and the Benin microsatellite configuration (AT)(8)N(12)GT

  10. Study of atmospheric scattering and absorbing aerosols at 550 nm over nearby western Indian tropical sites of Thar Desert effected region

    International Nuclear Information System (INIS)

    Vyas, B. M.; Saxenna, Abhishek; Panwar, Chhagan

    2016-01-01

    The first time experimental results based on spaced satellite observations of different kinds of aerosols properties have been described over two different contrast environmental conditions locations in western tropical Indian region specifically first at Jaisalmer (26.90°N, 69.90°E, 220 m above mean sea level (amsl)) located in central Thar dessert vicinity of western Indian site over Indian Thar Desert region and another at Udaipur (24.6° N, 73.7° E, 560 m amsl) site concerning to semi-urban and semi arid place of hilly areas. The daily values of aerosols optical depth absorption at 500nm (AOD abs 500nm), aerosols optical depth extinction at 500nm (AOD ext 500nm) along with aerosols optical depth at 500nmon (AOD 500nm) of eleven year period from Jan., 2004 to Dec., 2014 are basis of primary database of the present investigation. From the synthesis if the above database and the basis of rigorous statistical approach, following some of interesting facts are noted (i) larger annual monthly AOD variation of 0.93 is noted over JSM when compared to observed annual monthly change in AOD cycle, over UDP, of only 0.50 clearly indicating the more impact of desert influence activities about more than double times over JSM than UDP (ii) The higher abundance of absorbing aerosols occurrences about two time higher are seen in JSM in comparison to UDP. It indicates the clear evidence of strong optical absorption properties of useful solar mid visible wavelength at 550nm as the results of presence of more availability of dust aerosols as mineral natural type in pre-monsoon to post-monsoon over JSM which is also more predominant over JSM than the UDP region located far away from desert activity regime (iii) The greater sharing of extinction solar radiation effect on aerosols are more effective in pre-monsoon in UDP in reference to over JSM, where as in case of UDP, the aerosols effect through the scattering mechanism gradually reduce from monsoon to winter months as compared

  11. Study of atmospheric scattering and absorbing aerosols at 550 nm over nearby western Indian tropical sites of Thar Desert effected region

    Energy Technology Data Exchange (ETDEWEB)

    Vyas, B. M., E-mail: bmvyas@yahoo.com; Saxenna, Abhishek; Panwar, Chhagan [Department of Physics, M.L. Sukhadia University, Udaipur-313001 (India)

    2016-05-06

    The first time experimental results based on spaced satellite observations of different kinds of aerosols properties have been described over two different contrast environmental conditions locations in western tropical Indian region specifically first at Jaisalmer (26.90°N, 69.90°E, 220 m above mean sea level (amsl)) located in central Thar dessert vicinity of western Indian site over Indian Thar Desert region and another at Udaipur (24.6° N, 73.7° E, 560 m amsl) site concerning to semi-urban and semi arid place of hilly areas. The daily values of aerosols optical depth absorption at 500nm (AOD abs 500nm), aerosols optical depth extinction at 500nm (AOD ext 500nm) along with aerosols optical depth at 500nmon (AOD 500nm) of eleven year period from Jan., 2004 to Dec., 2014 are basis of primary database of the present investigation. From the synthesis if the above database and the basis of rigorous statistical approach, following some of interesting facts are noted (i) larger annual monthly AOD variation of 0.93 is noted over JSM when compared to observed annual monthly change in AOD cycle, over UDP, of only 0.50 clearly indicating the more impact of desert influence activities about more than double times over JSM than UDP (ii) The higher abundance of absorbing aerosols occurrences about two time higher are seen in JSM in comparison to UDP. It indicates the clear evidence of strong optical absorption properties of useful solar mid visible wavelength at 550nm as the results of presence of more availability of dust aerosols as mineral natural type in pre-monsoon to post-monsoon over JSM which is also more predominant over JSM than the UDP region located far away from desert activity regime (iii) The greater sharing of extinction solar radiation effect on aerosols are more effective in pre-monsoon in UDP in reference to over JSM, where as in case of UDP, the aerosols effect through the scattering mechanism gradually reduce from monsoon to winter months as compared

  12. Source apportionment of PM2.5 at a regional background site in North China using PMF linked with radiocarbon analysis: insight into the contribution of biomass burning

    Directory of Open Access Journals (Sweden)

    Z. Zong

    2016-09-01

    Full Text Available Source apportionment of fine particles (PM2.5 at a background site in North China in the winter of 2014 was done using statistical analysis, radiocarbon (14C measurement and positive matrix factorization (PMF modeling. Results showed that the concentration of PM2.5 was 77.6 ± 59.3 µg m−3, of which sulfate (SO42− concentration was the highest, followed by nitrate (NO3−, organic carbon (OC, elemental carbon (EC and ammonium (NH4+. As demonstrated by backward trajectory, more than half of the air masses during the sampling period were from the Beijing–Tianjin–Hebei (BTH region, followed by Mongolia and the Shandong Peninsula. Cluster analysis of chemical species suggested an obvious signal of biomass burning in the PM2.5 from the Shandong Peninsula, while the PM2.5 from the BTH region showed a vehicle emission pattern. This finding was further confirmed by the 14C measurement of OC and EC in two merged samples. The 14C result indicated that biogenic and biomass burning emission contributed 59 ± 4 and 52 ± 2 % to OC and EC concentrations, respectively, when air masses originated from the Shandong Peninsula, while the contributions fell to 46 ± 4 and 38 ± 1 %, respectively, when the prevailing wind changed and came from the BTH region. The minimum deviation between source apportionment results from PMF and 14C measurement was adopted as the optimal choice of the model exercises. Here, two minor overestimates with the same range (3 % implied that the PMF result provided a reasonable source apportionment of the regional PM2.5 in this study. Based on the PMF modeling, eight sources were identified; of these, coal combustion, biomass burning and vehicle emission were the main contributors of PM2.5, accounting for 29.6, 19.3 and 15.9 %, respectively. Compared with overall source apportionment, the contributions of vehicle emission, mineral dust, coal combustion and biomass burning increased when air masses

  13. CodonShuffle: a tool for generating and analyzing synonymously mutated sequences

    OpenAIRE

    Jorge, Daniel Macedo de Melo; Mills, Ryan E.; Lauring, Adam S.

    2015-01-01

    Because synonymous mutations do not change the amino acid sequence of a protein, they are generally considered to be selectively neutral. Empiric data suggest, however, that a significant fraction of viral mutational fitness effects may be attributable to synonymous mutation. Bias in synonymous codon usage in viruses may result from selection for translational efficiency, mutational bias, base pairing requirements in RNA structures, or even selection against specific dinucleotides by innate i...

  14. Second site escape of a T20-dependent HIV-1 variant by a single amino acid change in the CD4 binding region of the envelope glycoprotein

    Directory of Open Access Journals (Sweden)

    Berkhout Ben

    2006-11-01

    Full Text Available Abstract Background We previously described the selection of a T20-dependent human immunodeficiency virus type-1 (HIV-1 variant in a patient on T20 therapy. The fusion inhibitor T20 targets the viral envelope (Env protein by blocking a conformational switch that is critical for viral entry into the host cell. T20-dependent viral entry is the result of 2 mutations in Env (GIA-SKY, creating a protein that undergoes a premature conformational switch, and the presence of T20 prevents this premature switch and rescues viral entry. In the present study, we performed 6 independent evolution experiments with the T20-dependent HIV-1 variant in the absence of T20, with the aim to identify second site compensatory changes, which may provide new mechanistic insights into Env function and the T20-dependence mechanism. Results Escape variants with improved replication capacity appeared within 42 days in 5 evolution cultures. Strikingly, 3 cultures revealed the same single amino acid change in the CD4 binding region of Env (glycine at position 431 substituted for arginine: G431R. This mutation was sufficient to abolish the T20-dependence phenotype and restore viral replication in the absence of T20. The GIA-SKY-G431R escape variant produces an Env protein that exhibits reduced syncytia formation and reduced cell-cell fusion activity. The escape variant was more sensitive to an antibody acting on an early gp41 intermediate, suggesting that the G431R mutation helps preserve a pre-fusion Env conformation, similar to T20 action. The escape variant was also less sensitive to soluble CD4, suggesting a reduced CD4 receptor affinity. Conclusion The forced evolution experiments indicate that the premature conformational switch of the T20-dependent HIV-1 Env variant (GIA-SKY can be corrected by a second site mutation in Env (GIA-SKY-G431R that affects the interaction with the CD4 receptor.

  15. Annotating pathogenic non-coding variants in genic regions.

    Science.gov (United States)

    Gelfman, Sahar; Wang, Quanli; McSweeney, K Melodi; Ren, Zhong; La Carpia, Francesca; Halvorsen, Matt; Schoch, Kelly; Ratzon, Fanni; Heinzen, Erin L; Boland, Michael J; Petrovski, Slavé; Goldstein, David B

    2017-08-09

    Identifying the underlying causes of disease requires accurate interpretation of genetic variants. Current methods ineffectively capture pathogenic non-coding variants in genic regions, resulting in overlooking synonymous and intronic variants when searching for disease risk. Here we present the Transcript-inferred Pathogenicity (TraP) score, which uses sequence context alterations to reliably identify non-coding variation that causes disease. High TraP scores single out extremely rare variants with lower minor allele frequencies than missense variants. TraP accurately distinguishes known pathogenic and benign variants in synonymous (AUC = 0.88) and intronic (AUC = 0.83) public datasets, dismissing benign variants with exceptionally high specificity. TraP analysis of 843 exomes from epilepsy family trios identifies synonymous variants in known epilepsy genes, thus pinpointing risk factors of disease from non-coding sequence data. TraP outperforms leading methods in identifying non-coding variants that are pathogenic and is therefore a valuable tool for use in gene discovery and the interpretation of personal genomes.While non-coding synonymous and intronic variants are often not under strong selective constraint, they can be pathogenic through affecting splicing or transcription. Here, the authors develop a score that uses sequence context alterations to predict pathogenicity of synonymous and non-coding genetic variants, and provide a web server of pre-computed scores.

  16. Teens, Kindness and Cruelty on Social Network Sites: How American Teens Navigate the New World of "Digital Citizenship"

    Science.gov (United States)

    Lenhart, Amanda; Madden, Mary; Smith, Aaron; Purcell, Kristen; Zickuhr, Kathryn; Rainie, Lee

    2011-01-01

    Social media use has become so pervasive in the lives of American teens that having a presence on a social network site is almost synonymous with being online. Fully 95% of all teens ages 12-17 are now online and 80% of those online teens are users of social media sites. The authors focused their attention in this research on social network sites…

  17. Rock-block characterization on regional to local scales for two SKB sites in Forsmark - Uppland and Laxemar - eastern Smaaland, south-eastern Sweden

    International Nuclear Information System (INIS)

    Beckholmen, Monica; Tiren, Sven A.

    2010-11-01

    Digital elevation data in 500m, 50m and 10m grids were used for rock-block interpretations at regional, semi-regional and local scales of areas around the two SKB sites, Forsmark and Laxemar, objects for the site-investigation programme. Both areas are interpreted to be close to the surface of the sub- Cambrian peneplain and varying altitude and attitude may testify to blockfaulting in the distorted peneplain. Topographic breaks and changes in the gradient also reveal possible zones of weakness that may conduct water. Rock blocks were constructed for Uppland at 1:750 000, northern Uppland at 1:450 000 and the local Forsmark area at 1:150 000, three sets were constructed for eastern Smaaland at 1:500 000, and one for the semi-regional area at 1:250 000 and one for the local Laxemar area at 1:75 000. The orientation of rock-block boundaries and the size of the rock blocks were treated statistically. The rock blocks/polygons were analysed for their mean, minimum and maximum elevation and the range. The values were displayed by maps. The topography in especially eastern Smaaland is dominated by a clear gradient, the land rising from the sea in the east. Efforts were therefore made to remove an estimated gradient to assess the residual features and the same analyses were then made for mean, maximum, minimum and range values. In many cases the results were enhanced and the two types of presentations are complementary to each other. The rock-block interpretations were compared to bedrock and general correlation between major structures where identified. However, the distribution of rocks on a regional map often demonstrates the plastic deformation in a wider zone. Earthquake epicentres were combined with the rock-block maps and assuming that interpreted rock-block boundaries are fairly steep, there is good agreement between the location of epicentres and rock-block boundaries. In some cases it can be seen how seismic disturbance migrated along a structure. Many

  18. Rock-block characterization on regional to local scales for two SKB sites in Forsmark - Uppland and Laxemar - eastern Smaaland, south-eastern Sweden

    Energy Technology Data Exchange (ETDEWEB)

    Beckholmen, Monica; Tiren, Sven A. (GEOSIGMA AB (Sweden))

    2010-11-15

    Digital elevation data in 500m, 50m and 10m grids were used for rock-block interpretations at regional, semi-regional and local scales of areas around the two SKB sites, Forsmark and Laxemar, objects for the site-investigation programme. Both areas are interpreted to be close to the surface of the sub- Cambrian peneplain and varying altitude and attitude may testify to blockfaulting in the distorted peneplain. Topographic breaks and changes in the gradient also reveal possible zones of weakness that may conduct water. Rock blocks were constructed for Uppland at 1:750 000, northern Uppland at 1:450 000 and the local Forsmark area at 1:150 000, three sets were constructed for eastern Smaaland at 1:500 000, and one for the semi-regional area at 1:250 000 and one for the local Laxemar area at 1:75 000. The orientation of rock-block boundaries and the size of the rock blocks were treated statistically. The rock blocks/polygons were analysed for their mean, minimum and maximum elevation and the range. The values were displayed by maps. The topography in especially eastern Smaaland is dominated by a clear gradient, the land rising from the sea in the east. Efforts were therefore made to remove an estimated gradient to assess the residual features and the same analyses were then made for mean, maximum, minimum and range values. In many cases the results were enhanced and the two types of presentations are complementary to each other. The rock-block interpretations were compared to bedrock and general correlation between major structures where identified. However, the distribution of rocks on a regional map often demonstrates the plastic deformation in a wider zone. Earthquake epicentres were combined with the rock-block maps and assuming that interpreted rock-block boundaries are fairly steep, there is good agreement between the location of epicentres and rock-block boundaries. In some cases it can be seen how seismic disturbance migrated along a structure. Many

  19. GTP Binding and Oncogenic Mutations May Attenuate Hypervariable Region (HVR)-Catalytic Domain Interactions in Small GTPase K-Ras4B, Exposing the Effector Binding Site*

    Science.gov (United States)

    Lu, Shaoyong; Banerjee, Avik; Jang, Hyunbum; Zhang, Jian; Gaponenko, Vadim; Nussinov, Ruth

    2015-01-01

    K-Ras4B, a frequently mutated oncogene in cancer, plays an essential role in cell growth, differentiation, and survival. Its C-terminal membrane-associated hypervariable region (HVR) is required for full biological activity. In the active GTP-bound state, the HVR interacts with acidic plasma membrane (PM) headgroups, whereas the farnesyl anchors in the membrane; in the inactive GDP-bound state, the HVR may interact with both the PM and the catalytic domain at the effector binding region, obstructing signaling and nucleotide exchange. Here, using molecular dynamics simulations and NMR, we aim to figure out the effects of nucleotides (GTP and GDP) and frequent (G12C, G12D, G12V, G13D, and Q61H) and infrequent (E37K and R164Q) oncogenic mutations on full-length K-Ras4B. The mutations are away from or directly at the HVR switch I/effector binding site. Our results suggest that full-length wild-type GDP-bound K-Ras4B (K-Ras4BWT-GDP) is in an intrinsically autoinhibited state via tight HVR-catalytic domain interactions. The looser association in K-Ras4BWT-GTP may release the HVR. Some of the oncogenic mutations weaken the HVR-catalytic domain association in the K-Ras4B-GDP/-GTP bound states, which may facilitate the HVR disassociation in a nucleotide-independent manner, thereby up-regulating oncogenic Ras signaling. Thus, our results suggest that mutations can exert their effects in more than one way, abolishing GTP hydrolysis and facilitating effector binding. PMID:26453300

  20. GTP Binding and Oncogenic Mutations May Attenuate Hypervariable Region (HVR)-Catalytic Domain Interactions in Small GTPase K-Ras4B, Exposing the Effector Binding Site.

    Science.gov (United States)

    Lu, Shaoyong; Banerjee, Avik; Jang, Hyunbum; Zhang, Jian; Gaponenko, Vadim; Nussinov, Ruth

    2015-11-27

    K-Ras4B, a frequently mutated oncogene in cancer, plays an essential role in cell growth, differentiation, and survival. Its C-terminal membrane-associated hypervariable region (HVR) is required for full biological activity. In the active GTP-bound state, the HVR interacts with acidic plasma membrane (PM) headgroups, whereas the farnesyl anchors in the membrane; in the inactive GDP-bound state, the HVR may interact with both the PM and the catalytic domain at the effector binding region, obstructing signaling and nucleotide exchange. Here, using molecular dynamics simulations and NMR, we aim to figure out the effects of nucleotides (GTP and GDP) and frequent (G12C, G12D, G12V, G13D, and Q61H) and infrequent (E37K and R164Q) oncogenic mutations on full-length K-Ras4B. The mutations are away from or directly at the HVR switch I/effector binding site. Our results suggest that full-length wild-type GDP-bound K-Ras4B (K-Ras4B(WT)-GDP) is in an intrinsically autoinhibited state via tight HVR-catalytic domain interactions. The looser association in K-Ras4B(WT)-GTP may release the HVR. Some of the oncogenic mutations weaken the HVR-catalytic domain association in the K-Ras4B-GDP/-GTP bound states, which may facilitate the HVR disassociation in a nucleotide-independent manner, thereby up-regulating oncogenic Ras signaling. Thus, our results suggest that mutations can exert their effects in more than one way, abolishing GTP hydrolysis and facilitating effector binding. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  1. Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data.

    Science.gov (United States)

    Chung, Dongjun; Kuan, Pei Fen; Li, Bo; Sanalkumar, Rajendran; Liang, Kun; Bresnick, Emery H; Dewey, Colin; Keleş, Sündüz

    2011-07-01

    Chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq) is rapidly replacing chromatin immunoprecipitation combined with genome-wide tiling array analysis (ChIP-chip) as the preferred approach for mapping transcription-factor binding sites and chromatin modifications. The state of the art for analyzing ChIP-seq data relies on using only reads that map uniquely to a relevant reference genome (uni-reads). This can lead to the omission of up to 30% of alignable reads. We describe a general approach for utilizing reads that map to multiple locations on the reference genome (multi-reads). Our approach is based on allocating multi-reads as fractional counts using a weighted alignment scheme. Using human STAT1 and mouse GATA1 ChIP-seq datasets, we illustrate that incorporation of multi-reads significantly increases sequencing depths, leads to detection of novel peaks that are not otherwise identifiable with uni-reads, and improves detection of peaks in mappable regions. We investigate various genome-wide characteristics of peaks detected only by utilization of multi-reads via computational experiments. Overall, peaks from multi-read analysis have similar characteristics to peaks that are identified by uni-reads except that the majority of them reside in segmental duplications. We further validate a number of GATA1 multi-read only peaks by independent quantitative real-time ChIP analysis and identify novel target genes of GATA1. These computational and experimental results establish that multi-reads can be of critical importance for studying transcription factor binding in highly repetitive regions of genomes with ChIP-seq experiments.

  2. Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data.

    Directory of Open Access Journals (Sweden)

    Dongjun Chung

    2011-07-01

    Full Text Available Chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq is rapidly replacing chromatin immunoprecipitation combined with genome-wide tiling array analysis (ChIP-chip as the preferred approach for mapping transcription-factor binding sites and chromatin modifications. The state of the art for analyzing ChIP-seq data relies on using only reads that map uniquely to a relevant reference genome (uni-reads. This can lead to the omission of up to 30% of alignable reads. We describe a general approach for utilizing reads that map to multiple locations on the reference genome (multi-reads. Our approach is based on allocating multi-reads as fractional counts using a weighted alignment scheme. Using human STAT1 and mouse GATA1 ChIP-seq datasets, we illustrate that incorporation of multi-reads significantly increases sequencing depths, leads to detection of novel peaks that are not otherwise identifiable with uni-reads, and improves detection of peaks in mappable regions. We investigate various genome-wide characteristics of peaks detected only by utilization of multi-reads via computational experiments. Overall, peaks from multi-read analysis have similar characteristics to peaks that are identified by uni-reads except that the majority of them reside in segmental duplications. We further validate a number of GATA1 multi-read only peaks by independent quantitative real-time ChIP analysis and identify novel target genes of GATA1. These computational and experimental results establish that multi-reads can be of critical importance for studying transcription factor binding in highly repetitive regions of genomes with ChIP-seq experiments.

  3. Influence of region and site-specific factors on the degree of general validity of ecological and primary-energy-related assessments of biogas; Einfluss regionaler und standortspezifischer Faktoren auf die Allgemeingueltigkeit oekologischer und primaerenergetischer Bewertungen von Biogas

    Energy Technology Data Exchange (ETDEWEB)

    Dressler, Daniela

    2015-11-01

    As described in this publication, since the early 1990s numerous studies based on the life cycle assessment methodology have been dedicated to assessments of different kinds of bioenergy in comparison with fossil energy resources in terms of their energy balance and environmental impact. On reviewing the results of these studies one finds a strikingly wide range of variation. One major factor of influence on the results of life cycle assessments, besides methodological factors such as the choice of allocation method, is the representativeness of the data used. Thus, widely varying results are also obtained when balance calculations and assessments are performed on energy crops with due consideration to regional and site-specific factors. To address this problem the present study endeavoured to identify region and site-specific factors and assess them in terms of their influence on the life cycle assessment of the cultivation and conversion to biogas of different kinds of energy crops. For this purpose the following questions were explored: What influence do region, site and equipment-specific factors have on the results of ecological and primary-energy-related assessments; and how large are the differences in results between region and site-specific assessments on the one hand and assessments based on general assumptions on the other? It transpires that the results of region and site-specific assessments differ from one another in terms of both the assessment of energy cropping and the assessment of the entire process chain of biogas production and conversion to electricity.

  4. Appraisal of nuclear waste isolation in the vadose zone in arid and semiarid regions (with emphasis on the Nevada Test Site)

    International Nuclear Information System (INIS)

    Wollenberg, H.A.; Wang, J.S.Y.; Korbin, G.

    1983-05-01

    An appraisal was made of the concept of isolating high-level radioactive waste in the vadose zone of alluvial-filled valleys and tuffaceous rocks of the Basin and Range geomorphic province. Principal attributes of these terranes are: (1) low population density, (2) low moisture influx, (3) a deep water table, (4) the presence of sorptive rocks, and (5) relative ease of construction. Concerns about heat effects of waste on unsaturated rocks of relatively low thermal conductivity are considered. Calculations show that a standard 2000-acre repository with a thermal loading of 40 kW/acre in partially saturated alluvium or tuff would experience an average temperature rise of less than 100 0 C above the initial temperature. The actual maximum temperature would depend strongly on the emplacement geometry. Concerns about seismicity, volcanism, and future climatic change are also mitigated. The conclusion reached in this appraisal is that unsaturated zones in alluvium and tuff of arid regions should be investigated as comprehensively as other geologic settings considered to be potential repository sites

  5. Comparison of thermal analysis, micro structural and compositional of archaeological indigenous ceramic (Caninhas site of Canas - SP) with actual clay/ceramic of region

    International Nuclear Information System (INIS)

    Nakano, F.P.; Taguchi, S.P.; Matos, C.C.; Ribeiro, R.B.

    2009-01-01

    The ceramic material found at the archaeological site in Caninhas, shows funerary structures of combustion and various objects of Tupi-Guarani indigenous use. These pieces and fragments were saved and cataloged, in approximately 4000 units. The ceramics present a gradient of color, from ochre to dark gray, when from the surface to the center of the piece, indicating compositional variation caused by inefficient sintering carried out by indigenous people. The goal of this study was to observe the phase transition temperature, decomposition, mass variation and reactions that occur in the archaeological and nowadays ceramics (by DSC/TG), together with micro structural analysis (by SEM), phase analysis (by XRD) and chemical composition (by EDS). Ceramics nowadays are sintered with air, in a temperature ranging between 400-800 °C for one hour, and presents heterogeneous microstructure. The archaeological ceramics were identified by the illite, hydrated alumina, lutecite and quartz phase, and the caulinite, lutecite and quartz phase in clay produced today from that region differs in all characteristics and aspects according to time. The interaction between different areas of expertise is fundamental to aggregate knowledge: the use of ceramic material engineering to archaeological application. (author)

  6. Regional Models of Diameter as a Function of Individual Tree Attributes, Climate and Site Characteristics for Six Major Tree Species in Alberta, Canada

    Directory of Open Access Journals (Sweden)

    Dan A. MacIsaac

    2011-09-01

    Full Text Available We investigated the relationship of stem diameter to tree, site and stand characteristics for six major tree species (trembling aspen, white birch, balsam fir, lodgepole pine, black spruce, and white spruce in Alberta (Canada with data from Alberta Sustainable Resource Development Permanent Sample Plots. Using non-linear mixed effects modeling techniques, we developed models to estimate diameter at breast height using height, crown and stand attributes. Mixed effects models (with plot as subject using height, crown area, and basal area of the larger trees explained on average 95% of the variation in diameter at breast height across the six species with a root mean square error of 2.0 cm (13.4% of mean diameter. Fixed effects models (without plot as subject including the Natural Sub-Region (NSR information explained on average 90% of the variation in diameter at breast height across the six species with a root mean square error equal to 2.8 cm (17.9% of mean diameter. Selected climate variables provided similar results to models with NSR information. The inclusion of nutrient regime and moisture regime did not significantly improve the predictive ability of these models.

  7. Genetic diversity of Plasmodium falciparum merozoite surface protein-1 block 2 in sites of contrasting altitudes and malaria endemicities in the Mount Cameroon region.

    Science.gov (United States)

    Wanji, Samuel; Kengne-Ouafo, Arnaud J; Eyong, Ebanga E Joan; Kimbi, Helen K; Tendongfor, Nicholas; Ndamukong-Nyanga, Judith L; Nana-Djeunga, Hugues C; Bourguinat, Catherine; Sofeu-Feugaing, David D; Charvet, Claude L

    2012-05-01

    The present study analyzed the relationship between the genetic diversity of Plasmodium falciparum and parasitologic/entomologic indices in the Mount Cameroon region by using merozoite surface protein 1 as a genetic marker. Blood samples were collected from asymptomatic children from three altitude zones (high, intermediate, and low). Parasitologic and entomologic indices were determined by microscopy and landing catch mosquito collection/circumsporozoite protein-enzyme-linked immunosorbent assay, respectively. A total of 142 randomly selected P. falciparum-positive blood samples were genotyped by using a nested polymerase chain reaction-based technique. K-1 polymerase chain reaction products were also sequenced. As opposed to high altitude, the highest malaria prevalence (70.65%) and entomologic inoculation rate (2.43 infective/bites/night) were recorded at a low altitude site. Seven (18.91%), 22 (36.66%), and 19 (42.22%) samples from high, intermediate, and low altitudes, respectively, contained multiclonal infections. A new K-1 polymorphism was identified. This study shows a positive non-linear association between low/intermediate altitude (high malaria transmission) and an increase in P. falciparum merozoite surface protein 1 block 2 polymorphisms.

  8. Appraisal of nuclear waste isolation in the vadose zone in arid and semiarid regions (with emphasis on the Nevada Test Site)

    Energy Technology Data Exchange (ETDEWEB)

    Wollenberg, H.A.; Wang, J.S.Y.; Korbin, G.

    1983-05-01

    An appraisal was made of the concept of isolating high-level radioactive waste in the vadose zone of alluvial-filled valleys and tuffaceous rocks of the Basin and Range geomorphic province. Principal attributes of these terranes are: (1) low population density, (2) low moisture influx, (3) a deep water table, (4) the presence of sorptive rocks, and (5) relative ease of construction. Concerns about heat effects of waste on unsaturated rocks of relatively low thermal conductivity are considered. Calculations show that a standard 2000-acre repository with a thermal loading of 40 kW/acre in partially saturated alluvium or tuff would experience an average temperature rise of less than 100{sup 0}C above the initial temperature. The actual maximum temperature would depend strongly on the emplacement geometry. Concerns about seismicity, volcanism, and future climatic change are also mitigated. The conclusion reached in this appraisal is that unsaturated zones in alluvium and tuff of arid regions should be investigated as comprehensively as other geologic settings considered to be potential repository sites.

  9. Small-scale variations of climate change in mountainous forested terrain - a regional study from H.J. Andrews Long Term Ecological Research site in Oregon, USA

    Science.gov (United States)

    Honzakova, Katerina; Hoffmann, Peter; Jones, Julia; Thomas, Christoph

    2017-04-01

    There has been conflicting evidence as to whether high elevations are experiencing more pronounced climate warming than lower elevations in mountainous regions. In this study we analyze temperature records from H.J. Andrews Long Term Ecological Research, Oregon, USA and several nearby areas, comprising together 28 stations located in Cascade Mountains. The data, starting in 1958, are first checked for quality and homogenized using the Standard Normal Homogeneity Test. As a reference, composite climate time series based on the Global Historic Climate Network is created and together with cross-referencing against station records used to correct breaks and shifts in the data. In the next step, we investigate temperature patterns of the study site from 1958 to 2016 and compare them for valley and hill stations. In particular, we explore seasonality and inter-annual variability of the records and trends of the last day of frost. Additionally, 'cold' sums (positive and negative) are calculated to obtain a link between temperature and ecosystems' responses (such as budbreaks). So far, valley stations seem to be more prone to climate change than ridge or summit stations, contrary to current thinking. Building on previous knowledge, we attempt to provide physical explanations for the temperature records, focusing on wind patterns and associated phenomena such as cold air drainage and pooling. To aid this we analyze wind speed and direction data available for some of the stations since 1996, including seasonality and inter-annual variability of the observed flows.

  10. Control of water infiltration into near surface LLW disposal units. Progress report on field experiments at a humid region site, Beltsville, Maryland: Volume 7

    International Nuclear Information System (INIS)

    Schulz, R.K.; Ridky, R.W.; O'Donnell, E.

    1994-12-01

    The project objective is to assess means for controlling waste infiltration through waste disposal unit covers in humid regions. Experimental work is being performed in large scale lysimeters (70 ft x 45 ft x 10 ft) at Beltsville, MD and results of the assessment are applicable to disposal of LLW, uranium mill tailings, hazardous waste, and sanitary landfills. Three concepts are under investigation: (1) resistive layer barrier, (2) conductive layer barrier, and bioengineering water management. The resistive layer barrier consists of compacted earth (clay). The conductive layer barrier is a special case of the capillary barrier and it requires a flow layer (e.g. fine sandy loam) over a capillary break. As long as unsaturated conditions are maintained water is conducted by the flow layer to below the waste. This barrier is most efficient at low flow rates and is thus best placed below a resistive layer barrier. Such a combination of the resistive layer over the conductive layer barrier promises to be highly effective provided there is no appreciable subsidence. Bioengineering water management is a surface cover that is designed to accommodate subsidence. It consists of impermeable panels which enhance run-off and limit infiltration. Vegetation is planted in narrow openings between panels to transpire water from below the panels. This system has successfully dewatered two lysimeters thus demonstrating that this procedure could be used for remedial action (drying out) existing water-logged disposal sites at low cost

  11. Proceedings of the International Conference on Wind Energy in Remote Regions; Actes du Colloque International sur Energie Eolienne et Site Eloignes

    Energy Technology Data Exchange (ETDEWEB)

    Gipe, P.; Brudny, J.F.; Ilinca, A.; Bouchard, Y.; Proulx, P.; Chaumel, J.L.; Brunelle, M.T.; Henin, S.; Beaudoin, P.; Poirier, N.; Belanger, M. [Quebec Univ., Rimouski, PQ (Canada). WERR Organizational Committee

    2005-07-01

    This international conference focused on the growth opportunities for the wind power industry in Canada, with particular focus on Quebec and eastern Canada. The conference presented formal paper sessions dealing with the largest wind turbine technology to the smallest machines. It also included tutorials, site visits, case studies and commercial exhibits aimed at wind power developers, utility managers, manufacturers, sub-contractors, theoreticians and practitioners. Participants discussed the best and innovative solutions for the efficient regional development of wind power with particular focus on remote, off-grid applications such as isolated northern communities and islands. The presentations emphasized how wind energy can allow isolated communities to reduce their dependence on costly imported diesel fuel by combining modern electronics with wind turbines and diesel power systems. Environmental impacts and future innovations in wind technology were also discussed along with practical solutions for combining wind energy with other sources of energy. The conference featured 30 presentations, of which 18 have been catalogued separately for inclusion in this database. refs., tabs., figs.

  12. Supporting Regional Aged Care Nursing Staff to Manage Residents' Behavioural and Psychological Symptoms of Dementia, in Real Time, Using the Nurses' Behavioural Assistant (NBA): A Pilot Site 'End-User Attitudes' Trial.

    Science.gov (United States)

    Klein, Britt; Clinnick, Lisa; Chesler, Jessica; Stranieri, Andrew; Bignold, Adam; Dazeley, Richard; McLaren, Suzanne; Lauder, Sue; Balasubramanian, Venki

    2018-01-01

    This regional pilot site 'end-user attitudes' study explored nurses' experiences and impressions of using the Nurses' Behavioural Assistant (NBA) (a knowledge-based, interactive ehealth system) to assist them to better respond to behavioural and psychological symptoms of dementia (BPSD) and will be reported here. Focus groups were conducted, followed by a four-week pilot site 'end-user attitudes' trial of the NBA at a regional aged care residential facility (ACRF). Brief interviews were conducted with consenting nursing staff. Focus group feedback (N = 10) required only minor cosmetic changes to the NBA prototype. Post pilot site end-user interview data (N = 10) indicated that the regional ACRF nurses were positive and enthusiastic about the NBA, however several issues were also identified. Overall the results supported the utility of the NBA to promote a person centred care approach to managing BPSD. Slight modifications may be required to maximise its uptake across all ACRF nursing staff.

  13. Site Area Boundaries

    Data.gov (United States)

    U.S. Environmental Protection Agency — This dataset consists of site boundaries from multiple Superfund sites in U.S. EPA Region 8. These data were acquired from multiple sources at different times and...

  14. A Programmatic Approach to Determine Eligibility of Prehistoric Sites in the San Diego Subregion, Southern Coast Archeological Region, California, for the National Register of Historic Places

    Science.gov (United States)

    2007-08-01

    35 [CA-SDI-149], the Agua Hedionda sites, Rancho Park North, Remington Hills, and the Red Beach sites on Camp Pendleton). There has been considerable...these artifacts are associ- ated with nearby in situ features (hearths or related features). There is an eminent need to conduct standardized...of the sites occupied during the middle Holocene are situ - ated on the west end. Middle Holocene sites have also been identified on the cen- tral

  15. A Uniform Approach to Analogies, Synonyms, Antonyms, and Associations

    OpenAIRE

    Turney, Peter D.

    2008-01-01

    Recognizing analogies, synonyms, antonyms, and associations appear to be four distinct tasks, requiring distinct NLP algorithms. In the past, the four tasks have been treated independently, using a wide variety of algorithms. These four semantic classes, however, are a tiny sample of the full range of semantic phenomena, and we cannot afford to create ad hoc algorithms for each semantic phenomenon; we need to seek a unified approach. We propose to subsume a broad range of phenomena under anal...

  16. Codon adaptation and synonymous substitution rate in diatom plastid genes.

    Science.gov (United States)

    Morton, Brian R; Sorhannus, Ulf; Fox, Martin

    2002-07-01

    Diatom plastid genes are examined with respect to codon adaptation and rates of silent substitution (Ks). It is shown that diatom genes follow the same pattern of codon usage as other plastid genes studied previously. Highly expressed diatom genes display codon adaptation, or a bias toward specific major codons, and these major codons are the same as those in red algae, green algae, and land plants. It is also found that there is a strong correlation between Ks and variation in codon adaptation across diatom genes, providing the first evidence for such a relationship in the algae. It is argued that this finding supports the notion that the correlation arises from selective constraints, not from variation in mutation rate among genes. Finally, the diatom genes are examined with respect to variation in Ks among different synonymous groups. Diatom genes with strong codon adaptation do not show the same variation in synonymous substitution rate among codon groups as the flowering plant psbA gene which, previous studies have shown, has strong codon adaptation but unusually high rates of silent change in certain synonymous groups. The lack of a similar finding in diatoms supports the suggestion that the feature is unique to the flowering plant psbA due to recent relaxations in selective pressure in that lineage.

  17. The Selective Advantage of Synonymous Codon Usage Bias in Salmonella.

    Directory of Open Access Journals (Sweden)

    Gerrit Brandis

    2016-03-01

    Full Text Available The genetic code in mRNA is redundant, with 61 sense codons translated into 20 different amino acids. Individual amino acids are encoded by up to six different codons but within codon families some are used more frequently than others. This phenomenon is referred to as synonymous codon usage bias. The genomes of free-living unicellular organisms such as bacteria have an extreme codon usage bias and the degree of bias differs between genes within the same genome. The strong positive correlation between codon usage bias and gene expression levels in many microorganisms is attributed to selection for translational efficiency. However, this putative selective advantage has never been measured in bacteria and theoretical estimates vary widely. By systematically exchanging optimal codons for synonymous codons in the tuf genes we quantified the selective advantage of biased codon usage in highly expressed genes to be in the range 0.2-4.2 x 10-4 per codon per generation. These data quantify for the first time the potential for selection on synonymous codon choice to drive genome-wide sequence evolution in bacteria, and in particular to optimize the sequences of highly expressed genes. This quantification may have predictive applications in the design of synthetic genes and for heterologous gene expression in biotechnology.

  18. THE EXISTENCE OF SYNONYMS IN A LANGUAGE - 2 FORMS BUT ONE, OR RATHER 2 MEANINGS

    NARCIS (Netherlands)

    DEJONGE, B

    1993-01-01

    This paper focuses on the problem of synonymy. In practice, the existence of synonyms is generally accepted, but in theory, synonymy is undesirable. In this article an attempt is made to show that functional differences in meaning can distinguish two apparently synonymous verbs in Modern Italian.

  19. Sequencing of complete mitochondrial genomes confirms synonymization of Hyalomma asiaticum asiaticum and kozlovi, and advances phylogenetic hypotheses for the Ixodidae.

    Science.gov (United States)

    Liu, Zhi-Qiang; Liu, Yan-Feng; Kuermanali, Nuer; Wang, Deng-Feng; Chen, Shi-Jun; Guo, Hui-Ling; Zhao, Li; Wang, Jun-Wei; Han, Tao; Wang, Yuan-Zhi; Wang, Jie; Shen, Chen-Feng; Zhang, Zhuang-Zhi; Chen, Chuang-Fu

    2018-01-01

    Phylogeny of hard ticks (Ixodidae) remains unresolved. Mitochondrial genomes (mitogenomes) are increasingly used to resolve phylogenetic controversies, but remain unavailable for the entire large Hyalomma genus. Hyalomma asiaticum is a parasitic tick distributed throughout the Asia. As a result of great morphological variability, two subspecies have been recognised historically; until a morphological data-based synonymization was proposed. However, this hypothesis was never tested using molecular data. Therefore, objectives of this study were to: 1. sequence the first Hyalomma mitogenome; 2. scrutinise the proposed synonymization using molecular data, i.e. complete mitogenomes of both subspecies: H. a. asiaticum and kozlovi; 3. conduct phylogenomic and comparative analyses of all available Ixodidae mitogenomes. Results corroborate the proposed synonymization: the two mitogenomes are almost identical (99.6%). Genomic features of both mitogenomes are standard for Metastriata; which includes the presence of two control regions and all three "Tick-Box" motifs. Gene order and strand distribution are perfectly conserved for the entire Metastriata group. Suspecting compositional biases, we conducted phylogenetic analyses (29 almost complete mitogenomes) using homogeneous and heterogeneous (CAT) models of substitution. The results were congruent, apart from the deep-level topology of prostriate ticks (Ixodes): the homogeneous model produced a monophyletic Ixodes, but the CAT model produced a paraphyletic Ixodes (and thereby Prostriata), divided into Australasian and non-Australasian clades. This topology implies that all metastriate ticks have evolved from the ancestor of the non-Australian branch of prostriate ticks. Metastriata was divided into three clades: 1. Amblyomminae and Rhipicephalinae (Rhipicephalus, Hyalomma, Dermacentor); 2. Haemaphysalinae and Bothriocrotoninae, plus Amblyomma sphenodonti; 3. Amblyomma elaphense, basal to all Metastriata. We conclude that

  20. Halogenated greenhouse gases at the Swiss High Alpine Site of Jungfraujoch (3580 m asl): Continuous measurements and their use for regional European source allocation

    Science.gov (United States)

    Reimann, Stefan; Schaub, Daniel; Stemmler, Konrad; Folini, Doris; Hill, Matthias; Hofer, Peter; Buchmann, Brigitte; Simmonds, Peter G.; Greally, Brian R.; O'Doherty, Simon

    2004-03-01

    At the high Alpine site of Jungfraujoch (3580 m asl), 23 halogenated greenhouse gases are measured quasi-continuously by gas chromatography-mass spectrometry (GCMS). Measurement data from the years 2000-2002 are analyzed for trends and pollution events. Concentrations of the halogenated trace gases, which are already controlled in industrialized countries by the Montreal Protocol (e.g., CFCs) were at least stable or declining. Positive trends in the background concentrations were observed for substances which are used as CFC-substitutes (hydrofluorocarbons, hydrochlorofluorocarbons). Background concentrations of the hydrofluorocarbons at the Jungfraujoch increased from January 2000 until December 2002 as follows: HFC 134a (CF3CH2F) from 15 to 27 ppt, HFC 125 (CF3CHF2) from 1.4 to 2.8 ppt, and HFC 152a (CHF2CH3) from 2.3 to 3.2 ppt. For HFC 152a, a distinct increase of its concentration magnitude during pollution events was observed from 2000 to 2002, indicating rising European emissions for this compound. Background concentrations of all measured compounds were in good agreement with similar measurements at Mace Head, Ireland. On the other hand, peak concentrations were significantly higher at the Jungfraujoch. This finding is due to the proximity to potent European sources, foremost in southern Europe. The average ratio of halocarbons versus carbon monoxide (CO) concentrations above their baseline values was used to estimate source strengths for the part of Europe which most influences the Jungfraujoch during pollution events. HFCs emission estimates from Jungfraujoch tend to be higher than figures at Mace Head (Ireland) from the end of the 1990s, which either reflects the increased use of these compounds or the closer location of Jungfraujoch to major southern European sources. Transport of polluted European boundary layer air masses to the high Alpine site was observed especially during frontal passages, foehn events, and thermal lifting of air masses in summer

  1. Americium, plutonium and uranium contamination and speciation in well waters, streams and atomic lakes in the Sarzhal region of the Semipalatinsk Nuclear Test Site, Kazakhstan.

    Science.gov (United States)

    León Vintró, L; Mitchell, P I; Omarova, A; Burkitbayev, M; Jiménez Nápoles, H; Priest, N D

    2009-04-01

    New data are reported on the concentrations, isotopic composition and speciation of americium, plutonium and uranium in surface and ground waters in the Sarzhal region of the Semipalatinsk Test Site, and an adjacent area including the settlement of Sarzhal. The data relate to filtered water and suspended particulate from (a) streams originating in the Degelen Mountains, (b) the Tel'kem 1 and Tel'kem 2 atomic craters, and (c) wells on farms located within the study area and at Sarzhal. The measurements show that (241)Am, (239,240)Pu and (238)U concentrations in well waters within the study area are in the range 0.04-87mBq dm(-3), 0.7-99mBq dm(-3), and 74-213mBq dm(-3), respectively, and for (241)Am and (239,240)Pu are elevated above the levels expected solely on the basis of global fallout. Concentrations in streams sourced in the Degelen Mountains are similar, while concentrations in the two water-filled atomic craters are somewhat higher. Suspended particulate concentrations in well waters vary considerably, though median values are very low, at 0.01mBq dm(-3), 0.08mBq dm(-3) and 0.32mBq dm(-3) for (241)Am, (239,240)Pu and (238)U, respectively. The (235)U/(238)U isotopic ratio in almost all well and stream waters is slightly elevated above the 'best estimate' value for natural uranium worldwide, suggesting that some of the uranium in these waters is of test-site provenance. Redox analysis shows that on average most of the plutonium present in the microfiltered fraction of these waters is in a chemically reduced form (mean 69%; 95% confidence interval 53-85%). In the case of the atomic craters, the proportion is even higher. As expected, all of the americium present appears to be in a reduced form. Calculations suggest that annual committed effective doses to individual adults arising from the daily ingestion of these well waters are in the range 11-42microSv (mean 21microSv). Presently, the ground water feeding these wells would not appear to be contaminated with

  2. Americium, plutonium and uranium contamination and speciation in well waters, streams and atomic lakes in the Sarzhal region of the Semipalatinsk Nuclear Test Site, Kazakhstan

    Energy Technology Data Exchange (ETDEWEB)

    Leon Vintro, L. [School of Physics, University College Dublin, Belfield, Dublin 4 (Ireland)], E-mail: luis.leon@ucd.ie; Mitchell, P.I.; Omarova, A. [School of Physics, University College Dublin, Belfield, Dublin 4 (Ireland); Burkitbayev, M. [Department of Inorganic Chemistry, Al-Faraby Kazakh National University, Almaty (Kazakhstan); Jimenez Napoles, H. [School of Physics, University College Dublin, Belfield, Dublin 4 (Ireland); Priest, N.D. [School of Health and Social Sciences, Middlesex University, Enfield, EN3 4SA (United Kingdom)

    2009-04-15

    New data are reported on the concentrations, isotopic composition and speciation of americium, plutonium and uranium in surface and ground waters in the Sarzhal region of the Semipalatinsk Test Site, and an adjacent area including the settlement of Sarzhal. The data relate to filtered water and suspended particulate from (a) streams originating in the Degelen Mountains, (b) the Tel'kem 1 and Tel'kem 2 atomic craters, and (c) wells on farms located within the study area and at Sarzhal. The measurements show that {sup 241}Am, {sup 239,240}Pu and {sup 238}U concentrations in well waters within the study area are in the range 0.04-87 mBq dm{sup -3}, 0.7-99 mBq dm{sup -3}, and 74-213 mBq dm{sup -3}, respectively, and for {sup 241}Am and {sup 239,240}Pu are elevated above the levels expected solely on the basis of global fallout. Concentrations in streams sourced in the Degelen Mountains are similar, while concentrations in the two water-filled atomic craters are somewhat higher. Suspended particulate concentrations in well waters vary considerably, though median values are very low, at 0.01 mBq dm{sup -3}, 0.08 mBq dm{sup -3} and 0.32 mBq dm{sup -3} for {sup 241}Am, {sup 239,240}Pu and {sup 238}U, respectively. The {sup 235}U/{sup 238}U isotopic ratio in almost all well and stream waters is slightly elevated above the 'best estimate' value for natural uranium worldwide, suggesting that some of the uranium in these waters is of test-site provenance. Redox analysis shows that on average most of the plutonium present in the microfiltered fraction of these waters is in a chemically reduced form (mean 69%; 95% confidence interval 53-85%). In the case of the atomic craters, the proportion is even higher. As expected, all of the americium present appears to be in a reduced form. Calculations suggest that annual committed effective doses to individual adults arising from the daily ingestion of these well waters are in the range 11-42 {mu}Sv (mean 21 {mu

  3. Superfund Record of Decision (EPA Region 3): Southern Maryland Wood Treating Site, Hollywood, Maryland (first remedial action) June 1988. Final report

    Energy Technology Data Exchange (ETDEWEB)

    1988-06-29

    The Southern Maryland Wood Treating (SMWT) site is located in Hollywood, St. Mary's County, Maryland. The site is situated within a wetland area in a drainage divide such that runoff from the site discharges into Brooks Run and McIntosh Run tributaries, which flow into the Potomac River. The area surrounding the site is predominantly used for agricultural and residential purposes. Currently, part of the site is being used as a retail outlet for pretreated lumber and crab traps. The waste generated at the site included retort and cylinder sludges, process wastes, and material spillage. These wastes were in six onsite unlined lagoons. The primary contaminants of concern affecting the onsite ground water, soil, surface water, sediments, and debris include: VOCs, PNA, and base/neutral acid extractables. The selected remedial action for the site is included.

  4. Superfund Record of Decision (EPA region 2): Glen Ridge Radium site, Essex County, NJ. (Second remedial action), June 1990. Final report

    International Nuclear Information System (INIS)

    1990-01-01

    The 90-acre Glen Ridge Radium site is a residential community in the Borough of Glen Ridge, Essex County, New Jersey. The site is adjacent to another Superfund site, the Montclair/West Orange site. The Glen Ridge site includes a community of 274 properties serviced by surface reservoirs in northern New Jersey. In the early 1900s, a radium processing or utilization facility was located in the vicinity of the site. EPA investigations in 1981 and 1983 confirmed the presence of gamma radiation contamination in the Glen Ridge area and in several adjacent houses. The ROD complements the previous 1989 ROD for this site and provides a final remedy. The primary contaminant of concern affecting the soil is radium 226

  5. Regional regression equations for the estimation of selected monthly low-flow duration and frequency statistics at ungaged sites on streams in New Jersey

    Science.gov (United States)

    Watson, Kara M.; McHugh, Amy R.

    2014-01-01

    representative of the increased development of the last 20 years (1989–2008). The two different land- and water-use conditions were used as surrogates for development to determine whether there have been changes in low-flow statistics as a result of changes in development over time. The State was divided into two low-flow regression regions, the Coastal Plain and the non-coastal region, in order to improve the accuracy of the regression equations. The left-censored parametric survival regression method was used for the analyses to account for streamgages and partial-record stations that had zero flow values for some of the statistics. The average standard error of estimate for the 348 regression equations ranged from 16 to 340 percent. These regression equations and basin characteristics are presented in the U.S. Geological Survey (USGS) StreamStats Web-based geographic information system application. This tool allows users to click on an ungaged site on a stream in New Jersey and get the estimated flow-duration and low-flow frequency statistics. Additionally, the user can click on a streamgage or partial-record station and get the “at-site” streamflow statistics. The low-flow characteristics of a stream ultimately affect the use of the stream by humans. Specific information on the low-flow characteristics of streams is essential to water managers who deal with problems related to municipal and industrial water supply, fish and wildlife conservation, and dilution of wastewater.

  6. Source Estimation of Wintertime Soot Particles for an Urban Site Varanasi (25.30 N, 83.00 E) in Central Indo-Gangetic Plain Region

    Science.gov (United States)

    Singh, A. K.; Srivastava, M. K.; Dumka, U. C.; Singh, R. K.; Singh, R. S.; Tiwari, S.; Mehrotra, B. J.; Srivastava, A. K.

    2017-12-01

    Black carbon particles (BC: also called Soot) are formed by incomplete combustion of hydrocarbon based fuels (fossil fuel: coal, diesel, petrol, etc.) as well as due to burning of biomass and bio-fuels (wood, shrubs, dry leaves, etc.). Soot particles are warming agent to the atmosphere that gained wide attention in recent years due to their direct and indirect impacts on local, regional as well as global climate. The climatic effects due to soot are not well understood as indicated by large uncertainties in their climate forcing estimation, particularly in South and East Asian region, possibly due to unavailability of adequate database and information about the source. Measurement of wintertime BC mass concentrations for urban site in central IGP, `Varanasi' (25.30 N, 83.00 E), using a seven wavelength Aethalometer is reported in this work. Delta-C (=BC370 - BC880), which is an indicator of biomass/bio-fuels or residential coal burning is used to understand the source. Aethalometer based source apportionment model "Aethalometer model" was used to apportion the fossil fuel/traffic and wood/biomass burning mass concentration to the total BC mass. The preliminary results for representative month (January-2015) show that daily-average BC mass ranged from 4.47 to 20.70 μg m-3 (Average: 9.45 ± 4.15 μg m-3). The daily Absorption Ångström Exponent (AAE) and the ratio of BCff/BC and BCff/BCwb varied between 1.09 - 1.32, 0.67 - 0.92 and 2 - 40, respectively, due to the changes in BC emissions rates. The total BC, BC from fossil fuel (BCff) and BC from wood/biomass burning (BCwb) behaved in the remarkable diurnal pattern, behaving opposite to the mixing layer heights (MLHs). During daytime, MLHs are higher due to surface based solar warming and causes more volume of atmosphere for the BC dispersion. This phenomenon causes the surface measurement of lower BC mass during the daytime. The data is, however, still being processed for multi-year wintertime observations and the

  7. Calreticulin discriminates the proximal region at the N-glycosylation site of Glc1Man9GlcNAc2 ligand

    Energy Technology Data Exchange (ETDEWEB)

    Hirano, Makoto; Adachi, Yuka [Department of Materials and Life Science, Seikei University, 3-3-1 Kichijoji-kita, Musashino, Tokyo 180-8633 (Japan); Ito, Yukishige [Synthetic Cellular Chemistry Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan); ERATO, Japan Science and Technology Agency, Ito Glycotrilogy Project, 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan); Totani, Kiichiro, E-mail: ktotani@st.seikei.ac.jp [Department of Materials and Life Science, Seikei University, 3-3-1 Kichijoji-kita, Musashino, Tokyo 180-8633 (Japan)

    2015-10-23

    Calreticulin (CRT) is well known as a lectin-like chaperone that recognizes Glc1Man9GlcNAc2 (G1M9)-glycoproteins in the endoplasmic reticulum (ER). However, whether CRT can directly interact with the aglycone moiety (protein portion) of the glycoprotein remains controversial. To improve our understanding of CRT interactions, structure-defined G1M9-derivatives with different aglycones (–OH, –Gly–NH{sub 2}, and –Gly–Glu–{sup t}Bu) were used as CRT ligands, and their interactions with recombinant CRT were analyzed using thermal shift analysis. The results showed that CRT binds strongly to a G1M9-ligand in the order –Gly–Glu–{sup t}Bu > –Gly–NH{sub 2} > –OH, which is the same as that of the reglucosylation of Man9GlcNAc2 (M9)-derivatives by the folding sensor enzyme UGGT (UDP-glucose: glycoprotein glucosyltransferase). Our results indicate that, similar to UGGT, CRT discriminates the proximal region at the N-glycosylation site, suggesting a similar mechanism mediating the recognition of aglycone moieties in the ER glycoprotein quality control system. - Highlights: • Glc1Man9GlcNAc2 (G1M9) ligands with different aglycones were chemically prepared. • Calreticulin (CRT) discriminates the aglycone of Glc1Man9GlcNAc2 (G1M9) ligand. • CRT binds with G1M9 ligands in a similar manner to folding sensor enzyme.

  8. Immunization of rabbits with synthetic peptides derived from a highly conserved β-sheet epitope region underneath the receptor binding site of influenza A virus

    Directory of Open Access Journals (Sweden)

    Ideno S

    2013-11-01

    Full Text Available Shoji Ideno,1,3 Kaoru Sakai,1 Mikihiro Yunoki,2–4 Ritsuko Kubota-Koketsu,3,5 Yuji Inoue,3 Shota Nakamura,6 Teruo Yasunaga,6 Yoshinobu Okuno,5 Kazuyoshi Ikuta3 1Infectious Pathogen Research Section, Central Research Laboratory, Research and Development Division, Japan Blood Products Organization, Kobe, Japan; 2Research and Development Promotion Section, Research and Development Division, Japan Blood Products Organization, Tokyo, Japan; 3Department of Virology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan; 4Department of Veterinary Microbiology, School of Veterinary Medicine, Rakuno Gakuen University, Ebetsu, Hokkaido, Japan; 5Kanonji Institute, The Research Foundation for Microbial Diseases of Osaka University, Kanonji, Kagawa, Japan; 6Department of Genome Informatics, Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan Background: There is increasing concern about the speed with which health care providers can administer prophylaxis and treatment in an influenza pandemic. Generally, it takes several months to manufacture an influenza vaccine by propagation of the virus in chicken eggs or cultured cells. Newer, faster protocols for the production of vaccines that induce broad-spectrum immunity are therefore highly desirable. We previously developed human monoclonal antibody B-1 that shows broadly neutralizing activity against influenza A virus H3N2. B-1 recognizes an epitope region that includes an antiparallel β-sheet structure underneath the receptor binding site of influenza hemagglutinin (HA. In this study, the efficacy of a synthetic peptide vaccine derived from this epitope region against influenza A was evaluated. Materials and methods: Two peptides were synthesized, the upper and lower peptides. These peptides comprise amino acid residues 167–187 and 225–241, respectively, of the B-1 epitope region of HA, which is involved in

  9. Role of glial cell line-derived neurotrophic factor (GDNF)-neural cell adhesion molecule (NCAM) interactions in induction of neurite outgrowth and identification of a binding site for NCAM in the heel region of GDNF

    DEFF Research Database (Denmark)

    Nielsen, Janne; Gotfryd, Kamil; Li, Shizhong

    2009-01-01

    NCAM-induced neurite outgrowth by being independent of NCAM polysialylation. Additionally, we investigated the structural basis for GDNF-NCAM interactions and find that NCAM Ig3 is necessary for GDNF binding. Furthermore, we identify within the heel region of GDNF a binding site for NCAM...

  10. Monocistronic mRNAs containing defective hepatitis C virus-like picornavirus internal ribosome entry site elements in their 5 ' untranslated regions are efficiently translated in cells by a cap-dependent mechanism

    DEFF Research Database (Denmark)

    Belsham, Graham; Nielsen, Inge; Normann, Preben

    2008-01-01

    The initiation of protein synthesis on mRNAs within eukaryotic cells is achieved either by a 5' cap-dependent mechanism or through internal initiation directed by an internal ribosome entry site (IRES). Picornavirus IRES elements, located in the 59 untranslated region (5'UTR), contain extensive s...

  11. Annual Report - Remotely Operated NDE System for Inspection of Hanford's Waste Tank Knuckle Regions and Development of a Small Roving Annulus Inspection Vehicle T-SAFT Scanning Bridge for Savannah River Site Applications

    International Nuclear Information System (INIS)

    Pardini, Allan F.; Crawford, Susan L.; Harris, Robert V.; Samuel, Todd J.; Roberts, Ron A.; Alzheimer, James M.; Gervais, Kevin L.; Maynard, Melody A.; Tucker, Joseph C.

    2002-01-01

    The design, development, and performance testing of a prototype system known as the Remotely Operated Nondestructive Examination (RONDE)system to examine the knuckle region of a Hanford DST have been completed. The design and fabrication of a scanning bridge to support the Savannah River Site utilizing similar technology was also completed

  12. Analysis of transitions at two-fold redundant sites in mammalian genomes. Transition redundant approach-to-equilibrium (TREx distance metrics

    Directory of Open Access Journals (Sweden)

    Liberles David A

    2006-03-01

    Full Text Available Abstract Background The exchange of nucleotides at synonymous sites in a gene encoding a protein is believed to have little impact on the fitness of a host organism. This should be especially true for synonymous transitions, where a pyrimidine nucleotide is replaced by another pyrimidine, or a purine is replaced by another purine. This suggests that transition redundant exchange (TREx processes at the third position of conserved two-fold codon systems might offer the best approximation for a neutral molecular clock, serving to examine, within coding regions, theories that require neutrality, determine whether transition rate constants differ within genes in a single lineage, and correlate dates of events recorded in genomes with dates in the geological and paleontological records. To date, TREx analysis of the yeast genome has recognized correlated duplications that established a new metabolic strategies in fungi, and supported analyses of functional change in aromatases in pigs. TREx dating has limitations, however. Multiple transitions at synonymous sites may cause equilibration and loss of information. Further, to be useful to correlate events in the genomic record, different genes within a genome must suffer transitions at similar rates. Results A formalism to analyze divergence at two fold redundant codon systems is presented. This formalism exploits two-state approach-to-equilibrium kinetics from chemistry. This formalism captures, in a single equation, the possibility of multiple substitutions at individual sites, avoiding any need to "correct" for these. The formalism also connects specific rate constants for transitions to specific approximations in an underlying evolutionary model, including assumptions that transition rate constants are invariant at different sites, in different genes, in different lineages, and at different times. Therefore, the formalism supports analyses that evaluate these approximations. Transitions at synonymous

  13. Delineation of site-specific management units in a saline region at the Venice Lagoon margin, Italy, using soil reflectance and apparent electrical conductivity

    Science.gov (United States)

    Site-specific crop management utilizes site-specific management units (SSMUs) to apply inputs when, where, and in the amount needed to increase food productivity, optimize resource utilization, increase profitability, and reduce detrimental environmental impacts. It is the objective of this study to...

  14. Partition dataset according to amino acid type improves the prediction of deleterious non-synonymous SNPs

    International Nuclear Information System (INIS)

    Yang, Jing; Li, Yuan-Yuan; Li, Yi-Xue; Ye, Zhi-Qiang

    2012-01-01

    Highlights: ► Proper dataset partition can improve the prediction of deleterious nsSNPs. ► Partition according to original residue type at nsSNP is a good criterion. ► Similar strategy is supposed promising in other machine learning problems. -- Abstract: Many non-synonymous SNPs (nsSNPs) are associated with diseases, and numerous machine learning methods have been applied to train classifiers for sorting disease-associated nsSNPs from neutral ones. The continuously accumulated nsSNP data allows us to further explore better prediction approaches. In this work, we partitioned the training data into 20 subsets according to either original or substituted amino acid type at the nsSNP site. Using support vector machine (SVM), training classification models on each subset resulted in an overall accuracy of 76.3% or 74.9% depending on the two different partition criteria, while training on the whole dataset obtained an accuracy of only 72.6%. Moreover, the dataset was also randomly divided into 20 subsets, but the corresponding accuracy was only 73.2%. Our results demonstrated that partitioning the whole training dataset into subsets properly, i.e., according to the residue type at the nsSNP site, will improve the performance of the trained classifiers significantly, which should be valuable in developing better tools for predicting the disease-association of nsSNPs.

  15. Allegheny County Illegal Dump Sites

    Data.gov (United States)

    Allegheny County / City of Pittsburgh / Western PA Regional Data Center — The Illegal Dump Site dataset includes information on illegal dump sites, their type of trash, and the estimate tons of trash at each site. The information was...

  16. Phlebotomus (Paraphlebotomus) riouxi: a synonym of Phlebotomus chabaudi without any proven vectorial role in Tunisia and Algeria.

    Science.gov (United States)

    Tabbabi, A; Rhim, A; Ghrab, J; Martin, O; Aoun, K; Bouratbine, A; Ready, P D

    2014-08-01

    Phlebotomus (Paraphlebotomus) riouxi Depaquit, Léger & Killick-Kendrick (Diptera: Psychodidae) was described as a typological species based on a few morphological characters distinguishing it from Phlebotomus (Paraphlebotomus) chabaudi Croset, Abonnenc & Rioux. The naming of P. riouxi coincided with its incrimination as a rural vector of Leishmania tropica Wright (junior synonym: Leishmania killicki Rioux, Lanotte & Pratlong) in Tataouine governorate, an arid region of southern Tunisia. The current report finds insufficient evidence to incriminate either phlebotomine sandfly as a vector of L. tropica in North Africa. Phlebotomus riouxi was found not to have the characteristics of a phylogenetic or biological species, and therefore it is synonymized with P. chabaudi. Both taxa were recorded together for the first time in Tunisia, in Tataouine, where three of 12 males showed intermediate morphology and both sexes of each taxon were not characterized by specific lineages of the nuclear gene elongation factor-1α or the mitochondrial gene cytochrome b, for which a long 3' terminal fragment is recommended for phlebotomine phylogenetics. This case study indicates that the eco-epidemiology of leishmaniasis should focus more on identifying key components of vectorial transmission that are susceptible to interventions for disease control, rather than on defining sibling species of vectors. © 2014 The Royal Entomological Society.

  17. Low- and intermediate level radioactive waste from Risoe, Denmark. Site studies. Report no. 1. Oestermarie - Paradisbakkerne, Bornholm Region; Lav- og mellem radioaktivt affald fra Risoe, Danmark. Omegnsstudier. Rapport nr. 1. Omraede Oestermarie - Paradisbakkerne, Bornholms Regionskommune

    Energy Technology Data Exchange (ETDEWEB)

    Gravesen, P.; Nilsson, B.; Binderup, M.; Larsen, Tine; Schack Pedersen, S.A.

    2012-07-01

    The low- and intermediate-level radioactive wastes from Risoe (the nuclear reactor buildings, different types of material from the research periods and waste from hospitals and research institutes) have to be stored in a final disposal in Denmark for at least 300 years. In 2011, the results of the first analyses of 20 potential areas for siting a waste disposal were published. Of these potential areas, 6 specific sites were selected for further detailed studies. The site studies include information about geology, land use, nature preservation, archaeology, drinking water supply etc. The 5 municipalities with the 6 selected sites have been visited to obtain as much information about local conditions as possible. The present report describes the results for the area at Oestermarie-Paradisbakkerne in the region of Bornholm, East Denmark. (LN)

  18. Health assessment for Tex Tin Corporation, National Priorities List Site, Texas City, Texas, Region 6. CERCLIS No. TXD062113329. Preliminary report

    International Nuclear Information System (INIS)

    1990-01-01

    The Tex Tin Corporation facility, formerly Gulf Chemical and Metallurgical Corporation, is a proposed National Priorities List site located in Texas City, Galveston County, Texas. Tex Tin previously operated as a primary tin smelter, but currently operates as a copper smelter. Significant concentrations of metals (antimony, arsenic, barium, cadmium, chromium, copper, lead, manganese, mercury, nickel, silver, tin, and zinc) have been detected on-site in surface water, groundwater, and soil. Significant concentrations of metals (arsenic, cadmium, chromium, lead, nickel, and tin) have also been detected in ambient air samples collected off-site. Some remediation activities have occurred on-site including the closure of a 19-million-gallon ferric chloride pond and the removal of approximately 4,000 drums containing radioactive material. The Tex Tin site poses a potential public health concern for on-site workers, residents living in nearby neighborhoods, and possibly for a limited number of residents on private wells located within approximately one mile of the site

  19. Superfund Record of Decision (EPA Region 2): Woodland Township Route 72 site, Burlington County, New Jersey (first remedial action), May 16, 1990

    International Nuclear Information System (INIS)

    1990-01-01

    The 12-acre Woodland Route 72 Dump site is an abandoned hazardous waste dump in Woodland Township, Burlington County, New Jersey. The site is being remediated concurrently with another abandoned dump. Several chemical manufacturing firms dumped chemicals and other wastes into trenches and lagoons or burned the waste at the sites from the early 1950s to 1962. The primary contaminants of concern affecting the surface soil, sediment, sludge, debris, and ground water are VOCs including benzene, toluene, TCE and xylenes; organics including PAHs, pesticides, and phenols; radionuclides (e.g., uranium and thorium series); and metals including lead and chromium. The selected remedial action for the site includes excavation, further characterization, and offsite disposal at a permitted facility of 54,000 cubic yards (total from both sites) of contaminated surface soil, sludges, debris and sediment; offsite disposal of 19 cubic yards (total from both sites) of radiologically contaminated surface materials including a drum of radioactive pellets; ground water pumping and treatment with treatment to be determined during design. The total estimated present worth cost for the concurrent remedial actions at the Route 72 and Route 532 sites is $142,200,000

  20. Superfund record of decision (EPA Region 4): Marzone Inc. /Chevron Chemical Company Superfund Site, Operable Unit 1, Tifton, GA, September 1994

    Energy Technology Data Exchange (ETDEWEB)

    1994-09-30

    This decision document (Record of Decision) presents the selected remedial action for the Marzone, Inc./Chevron Chemical Company Site in Tift County, Georgia. EPA has organized the work at this Site into two phases or operable units (OUs). Operable Unit No. 1 involves contamination on the 1.68-acre former Marzone pesticide blending area, part of the Slack Property, and railroad drainage ditch past the southwest corner of the horse pasture, and contaminated groundwater related to the Site. This first operable unit is broken down into two separate remedies; one for groundwater and the other for soil.

  1. Replication origins oriGNAI3 and oriB of the mammalian AMPD2 locus nested in a region of straight DNA flanked by intrinsically bent DNA sites.

    Science.gov (United States)

    Balani, Valério Américo; de Lima Neto, Quirino Alves; Takeda, Karen Izumi; Gimenes, Fabrícia; Fiorini, Adriana; Debatisse, Michelle; Fernandez, Maria Aparecida

    2010-11-01

    The aim of this work was to determine whether intrinsically bent DNA sites are present at, or close to, the mammalian replication origins oriGNAI3 and oriB in the Chinese hamster AMPD2 locus. Using an electrophoretic mobility shift assay and in silico analysis, we located four intrinsically bent DNA sites (b1 to b4) in a fragment that contains the oriGNAI3 and one site (b5) proximal to oriB. The helical parameters show that each bent DNA site is curved in a left-handed superhelical writhe. A 2D projection of 3D fragment trajectories revealed that oriGNAI3 is located in a relatively straight segment flanked by bent sites b1 and b2, which map in previously identified Scaffold/Matrix Attachment Region. Sites b3 and b4 are located approximately 2 kb downstream and force the fragment into a strong closed loop structure. The b5 site is also located in an S/MAR that is found just downstream of oriB.

  2. Isolation of the Drosophila melanogaster dunce chromosomal region and recombinational mapping of dunce sequences with restriction site polymorphisms as genetic markers

    OpenAIRE

    Davis, Ronald L.; Davidson, Norman

    1984-01-01

    Using the method of chromosomal walking, we have isolated a contiguous region of the Drosophila melanogaster X chromosome which corresponds to salivary gland chromosome bands 3C12 to 3D4. This five-band region contains approximately 100 kilobases of DNA, including those sequences comprising dunce, a gene which functions in memory and cyclic nucleotide metabolism. Genome blots of DNA from flies carrying several different chromosomal aberrations with breakpoints in the region have been probed w...

  3. Soil sanitation in the course of rehabilitation measures for an abandoned colliery and coking plant site in the anthracite region of Aachen

    International Nuclear Information System (INIS)

    Blesken, M.; Reisinger, H.

    1993-01-01

    The sanitation measures for the contaminated industrial site ''Carolus Magnus'' consists of three components, thermal treatment, securing measures and ground water treatment. Within 1 1/2 years 50000 t of contaminated soil were treated in the thermal plant, 6000 m 3 of less contaminated soil were deposited in a secured deposit site and 70000 m 3 of uncontaminated material which dropped out during the separation process were relocated for landscapping. (orig.)

  4. Distinct site- and state-selective dissociation of methyl-trifluoroacetate observed in core-electron excitation at the oxygen K-edge region

    Science.gov (United States)

    Yamanaka, T.; Tabayashi, K.; Maruyama, T.; Harada, C.; Yoshida, H.

    2009-11-01

    Distinct site- and state-selective dissociation following the O1s core-excitation has been found in the gaseous molecules of methyl trifluoroacetate (MTFA). The site- and state-selective dissociation was examined by measuring the branching ratios of dominant CH3+ and CHO+ fragments. The branching ratios from MTFA showed that site-selective dissociation takes place via the excitation from the different atomic sites to the same π*CO resonance state, (O1sCO-1π*CO) and (O1sOMe-1π*CO). A pronounced O1sOMe site-selectivity was identified by a significant increment of CHO+ formation at the (O1sOMe→π*CO) band. The site-selectivity was also justified by an equivalent core approximation using the density functional theory calculation. State-selective dissociation was identified among the (O1sOMe-1π*CO), (O1sOMe-1σ*O-Me) and (O1sOMe-1σ*C-OMe) transitions originated from the same OMe core. State-selective production of CH3+ could be found at the (O1sOMe→σ*O-Me) band, whereas state-selective formation of CHO+ was observed at the (O1sOMe→π*CO) and (O1sOMe→σ*C-OMe) bands.

  5. Superfund record of decision (EPA Region 4): Ciba-Geigy Site (McIntosh Plant), Washington County, McIntosh, AL. (Third remedial action), July 1992. Final report

    International Nuclear Information System (INIS)

    1992-01-01

    The 1,500-acre Ciba-Geigy site is an active chemical manufacturer in an industrial area in McIntosh, Washington County, Alabama. A wetlands area borders the site property, and part of the site lies within the floodplain of the Tombigbee River. In 1985, EPA issued a RCRA permit that included a corrective action plan requiring Ciba-Geigy to remove and treat ground water and surface water contamination at the site. Further investigations by EPA revealed 11 former waste management areas of potential contamination onsite. These areas contain a variety of waste, debris, pesticide by-products and residues. The ROD addresses a final remedy for OU4, which includes contaminated soil and sludge in former waste management Area 8 and the upper dilute ditch. The primary contaminants of concern affecting the soil, sludge, and debris are VOCs, including benzene, toluene, and xylenes; other organics, including pesticides; metals, including arsenic, chromium, and lead; and inorganics, including cyanide. The selected remedial action for the site are included

  6. Using a Regional Cluster of AmeriFlux Sites in Central California to Advance Our Knowledge on Decadal-Scale Ecosystem-Atmosphere Carbon Dioxide Exchange

    Energy Technology Data Exchange (ETDEWEB)

    Baldocchi, Dennis [Univ. of California, Berkeley, CA (United States)

    2015-03-24

    Continuous eddy convariance measurements of carbon dioxide, water vapor and heat were measured continuously between an oak savanna and an annual grassland in California over a 4 year period. These systems serve as representative sites for biomes in Mediterranean climates and experience much seasonal and inter-annual variability in temperature and precipitation. These sites hence serve as natural laboratories for how whole ecosystem will respond to warmer and drier conditions. The savanna proved to be a moderate sink of carbon, taking up about 150 gC m-2y-1 compared to the annual grassland, which tended to be carbon neutral and often a source during drier years. But this carbon sink by the savanna came at a cost. This ecosystem used about 100 mm more water per year than the grassland. And because the savanna was darker and rougher its air temperature was about 0.5 C warmer. In addition to our flux measurements, we collected vast amounts of ancillary data to interpret the site and fluxes, making this site a key site for model validation and parameterization. Datasets consist of terrestrial and airborne lidar for determining canopy structure, ground penetrating radar data on root distribution, phenology cameras monitoring leaf area index and its seasonality, predawn water potential, soil moisture, stem diameter and physiological capacity of photosynthesis.

  7. Optimizing Restriction Site Placement for Synthetic Genomes

    Science.gov (United States)

    Montes, Pablo; Memelli, Heraldo; Ward, Charles; Kim, Joondong; Mitchell, Joseph S. B.; Skiena, Steven

    Restriction enzymes are the workhorses of molecular biology. We introduce a new problem that arises in the course of our project to design virus variants to serve as potential vaccines: we wish to modify virus-length genomes to introduce large numbers of unique restriction enzyme recognition sites while preserving wild-type function by substitution of synonymous codons. We show that the resulting problem is NP-Complete, give an exponential-time algorithm, and propose effective heuristics, which we show give excellent results for five sample viral genomes. Our resulting modified genomes have several times more unique restriction sites and reduce the maximum gap between adjacent sites by three to nine-fold.

  8. Superfund record of decision (EPA Region 4): Potter's septic tank service pits site, Brunswick County, Sandy Creek, NC. (First remedial action), August 1992. Final report

    International Nuclear Information System (INIS)

    1992-01-01

    The 5-acre Potter's Septic Tank Service Pits (Potter's Pits) is located in a rural section of Brunswick County, North Carolina. The site is situated within a residential community known as the Town of Sandy Creek. Disposal practices consisted of placing petroleum waste products and septic tank sludges either in shallow unlined pits or directly on the land surface. The ROD addresses the ground water treatment and contaminated soils at the site. Primary contaminants of concern affecting surface and subsurface soil are VOCs and semi-VOCs, including napthalene, metals, and pesticides. Ground water is contaminated with VOCs, including benzene, ethyl benzene, toluene; other organics including naphthalene, and xylenes; and metals, including chromium and lead. The selected remedial action for the site includes excavating all soils that exceed the soil clean-up standards; treating contaminated soils by using an onsite ex-situ thermal desorption process; performing secondary treatment of the concentrated organic contaminants, and sampling and analyzing the treatment residue

  9. Numerous Sinusoidal and Other EMF Phenomena, At Present and Former Native American Sites, May Be Superimposing Themselves onto Regional Power Grids.

    Science.gov (United States)

    Cadran, Lawrence R.; Mc Leod, Roger D.; Mc Leod, David M.

    2003-10-01

    Periodic electromagnetic field signals (EMF), sometimes noticeable as faint blue-light or other phenomena, frequently are also detected at sites associated with Native Americans. We first noticed this sort of information in the vicinity of Wendell, MA about fourteen years ago. Similar and other signals are apparent at Americas Stonehenge, AS, in North Salem, NH. Connecticut provided our first evidence of superposition of two such waves at the Gungywamp site north of Groton, CT. A Maine location first showed orthogonally oriented trajectories in neighborhoods formerly frequented by Molocket and Metallak and their relatives near Rumford and Rangeley, ME. Florida exhibits similar signals in the vicinity of Hollywood and at Miamis Tequesta instrument, as does a separate site in CT. Powerful thunderstorms in the vicinity of a stone serpent effigy in Ohio cause EMF pulsations. Such signals are possibly superimposing themselves onto power-grids, where frequency changes and system instabilities may occur, according to the elementary physics involved.

  10. Superfund Record of Decision (EPA Region 4): Maxey Flats Nuclear Disposal site, Fleming County, KY. (First remedial action), September 1991. Final report

    International Nuclear Information System (INIS)

    1991-01-01

    The 280-acre Maxey Flats Nuclear Disposal site is an inactive low-level radioactive waste disposal facility in Fleming County, Kentucky. The estimated 663 people who reside within 2.5 miles of the site use the public water supply for drinking purposes. From 1962 to 1977, Nuclear Engineering Company, Inc. (NECO), operated a solid by-product, source, and special nuclear material disposal facility under a license with the State. Several State investigations in the 1970's revealed that leachate contaminated with tritium and other radioactive substances was migrating from the disposal trenches to unrestricted areas. The Record of Decision (ROD) addresses final remediation of soil, debris, and associated leachate. The primary contaminants of concern affecting the soil and debris are VOCs including benzene, TCE, and toluene; metals including arsenic and lead; and radioactive materials. The selected remedial action for the site is included

  11. Elixir, Alchemy and the Metamorphoses of Two Synonyms

    Directory of Open Access Journals (Sweden)

    Gotthard Strohmaier

    2017-03-01

    Full Text Available The history of the terms ‘elixir’ and ‘alchemy’ seems paradoxical; derived from Greek, the Arabic al-iksīr signified a dry powder capable of transforming base metals into gold or silver. Evolving through the European languages, elixir has come to mean a magic liquid that can be ingested to cure illness. The second term, al-kīmiyāʼ, which was in its Arabic beginnings almost synonymous with elixir, took a different turn and changed its meaning from a miraculous substance into an abstract noun connoting the art of alchemy. This article intends to show that these changes of meaning are linked to inevitable interrelations between the two synonyms and, consequently, the generally assumed etymology of the Arabic alkīmiyāʼ from the seemingly corresponding Greek expression χυμεία must be questioned. Of particular interest is the hitherto overlooked fact that al-kīmiyāʼ ends in a glottal stop, indicated by the hamza and being a consonant in its own right, which ultimately points to a non-Greek origin.

  12. Oxazolidinone resistance mutations in 23S rRNA of Escherichia coli reveal the central region of domain V as the primary site of drug action

    DEFF Research Database (Denmark)

    Xiong, L; Kloss, P; Douthwaite, S

    2000-01-01

    Oxazolidinone antibiotics inhibit bacterial protein synthesis by interacting with the large ribosomal subunit. The structure and exact location of the oxazolidinone binding site remain obscure, as does the manner in which these drugs inhibit translation. To investigate the drug-ribosome interaction......, we selected Escherichia coli oxazolidinone-resistant mutants, which contained a randomly mutagenized plasmid-borne rRNA operon. The same mutation, G2032 to A, was identified in the 23S rRNA genes of several independent resistant isolates. Engineering of this mutation by site-directed mutagenesis...

  13. Cell adhesion to fibrillin-1: identification of an Arg-Gly-Asp-dependent synergy region and a heparin-binding site that regulates focal adhesion formation

    DEFF Research Database (Denmark)

    Bax, Daniel V; Mahalingam, Yashithra; Cain, Stuart

    2007-01-01

    We have defined the molecular basis of cell adhesion to fibrillin-1, the major structural component of extracellular microfibrils that are associated with elastic fibres. Using human dermal fibroblasts, and recombinant domain swap fragments containing the Arg-Gly-Asp motif, we have demonstrated...... a requirement for upstream domains for integrin-alpha(5)beta(1)-mediated cell adhesion and migration. An adjacent heparin-binding site, which supports focal adhesion formation, was mapped to the fibrillin-1 TB5 motif. Site-directed mutagenesis revealed two arginine residues that are crucial for heparin binding...

  14. Revised genomic consensus for the hypermethylated CpG island region of the human L1 transposon and integration sites of full length L1 elements from recombinant clones made using methylation-tolerant host strains

    DEFF Research Database (Denmark)

    Crowther, P J; Doherty, J P; Linsenmeyer, M E

    1991-01-01

    preferentially from L1 members which have accumulated mutations that have removed sites of methylation. We present a revised consensus from the 5' presumptive control region of these elements. This revised consensus contains a consensus RNA polymerase III promoter which would permit the synthesis of transcripts......Efficient recovery of clones from the 5' end of the human L1 dispersed repetitive elements necessitates the use of deletion mcr- host strains since this region contains a CpG island which is hypermethylated in vivo. Clones recovered with conventional mcr+ hosts seem to have been derived...... from the 5' end of full length L1 elements. Such potential transcripts are likely to exhibit a high degree of secondary structure. In addition, we have determined the flanking sequences for 6 full length L1 elements. The majority of full length L1 clones show no convincing evidence for target site...

  15. Water and earth uses, habits and nutritional diets in adjacent regions of places selected to site 4 and 5 nuclear power plants

    International Nuclear Information System (INIS)

    Damasceno, M.A.P.; Coelho, C.P.

    1982-01-01

    A way of life study on adjacent region of 4 and 5 Nuclear Power Plants aiming at environmental impacts evaluation, development environmental monitoring programs and safety analysis report of the area is presented. (C.M.) [pt

  16. Examining Sites of Recent Star Formation in the Galactic Center: A Closer Look at the Arched Filaments and H HII Regions

    Science.gov (United States)

    Hankins, Matthew; Herter, Terry; Lau, Ryan; Morris, Mark; Mills, Elisabeth

    2018-01-01

    In this dissertation presentation, we analyze mid-infrared imaging of the Arched Filaments and H HII regions in the Galactic center taken with the Faint Object Infrared Camera for the SOFIA Telescope (FORCAST). Examining these regions are of great interest because they provide insights on star formation in the Galactic center and the interactions massive stars have with the ISM. The Arched Filaments are a collection of molecular cloud ridges which are ionized by the nearby Arches star cluster, and give the appearance of large (~25 pc) arch-like structures. The H HII regions are a collection of HII regions just to the west of the Arches cluster (~5-15 pc). The origin of the stars powering the H HII regions is uncertain, as they may have formed in a nearby molecular cloud or could be ejected members of the Arches cluster. FORCAST observations of these regions were used to study the morphology and heating structure of the HII regions, as well as constrain their luminosities.Color-temperature maps of the Arched Filaments created with the FORCAST data reveals fairly uniform dust temperatures (~70-100 K) across the length filaments. The temperature uniformity of the clouds can be explained if they are heated by the Arches cluster but are located at a larger distance from the cluster than they appear. The density of the Arched Filaments clouds was estimated from the FORCAST data and was found to be below the threshold for tidal shearing, indicating that that the clouds will be destroyed by the strong tidal field near the Galactic center. To the west of the Arched Filaments, there is an interesting collection of HII regions, referred to as the H HII regions. These regions are likely heated by massive O/B type stars, and the morphology of the dust emission associated with these objects indicate a mixture of potential in situ formation mechanisms and interlopers. Interestingly, FORCAST imaging of the H HII regions also reveal several compact sources, which may be young

  17. Synonymic notes on Lepidanthrax osten sacken and redescription of L. tinctus (Thomson (Diptera, Bombyliidae, Anthracinae

    Directory of Open Access Journals (Sweden)

    Carlos José Einicker Lamas

    1996-01-01

    Full Text Available Based on the analysis of types, Lepidanthrax brachialis (Thomson, 1869 and L. quinquepunclatus (Thomson, 1869 are considered junior synonyms of L. tinctus (Thomson, 1869. Notes and illustrations of the type are presented.

  18. Synonymous Mutations at the Beginning of the Influenza A Virus Hemagglutinin Gene Impact Experimental Fitness.

    Science.gov (United States)

    Canale, Aneth S; Venev, Sergey V; Whitfield, Troy W; Caffrey, Daniel R; Marasco, Wayne A; Schiffer, Celia A; Kowalik, Timothy F; Jensen, Jeffrey D; Finberg, Robert W; Zeldovich, Konstantin B; Wang, Jennifer P; Bolon, Daniel N A

    2018-04-13

    The fitness effects of synonymous mutations can provide insights into biological and evolutionary mechanisms. We analyzed the experimental fitness effects of all single-nucleotide mutations, including synonymous substitutions, at the beginning of the influenza A virus hemagglutinin (HA) gene. Many synonymous substitutions were deleterious both in bulk competition and for individually isolated clones. Investigating protein and RNA levels of a subset of individually expressed HA variants revealed that multiple biochemical properties contribute to the observed experimental fitness effects. Our results indicate that a structural element in the HA segment viral RNA may influence fitness. Examination of naturally evolved sequences in human hosts indicates a preference for the unfolded state of this structural element compared to that found in swine hosts. Our overall results reveal that synonymous mutations may have greater fitness consequences than indicated by simple models of sequence conservation, and we discuss the implications of this finding for commonly used evolutionary tests and analyses. Copyright © 2018. Published by Elsevier Ltd.

  19. Estimation of Near-Field and Far-Field Dilutions for Site Selection of Effluent Outfall in a Coastal Region - A Case Study

    Digital Repository Service at National Institute of Oceanography (India)

    Naidu, V.S.

    . The effluent would move along the coast, and chances of reaching to the estuary are remote. Rise of the biological oxygen demand concentration to 2.9 mg/L above ambient is predicted at the release site. The water quality of Damanganga estuary would be restored...

  20. Superfund record of decision (EPA Region 4): Whitehouse Waste Oil Pits Site, Duval County, Jacksonville, FL. (First remedial action), (Amendment), June 1992. Final report

    International Nuclear Information System (INIS)

    1992-01-01

    The 7-acre Whitehouse Waste Oil Pits site was used by Allied Petroleum Products (Allied) to dispose of acidic waste oil sludges from its oil reclamation process in Whitehouse, Duval County, Florida. A cypress swamp system and residential area are immediately adjacent to the site. The acid sludge produced in the first step and clay used to decolorize the oil were dumped into the unlined pits at the site. A 1985 ROD addressed source control as a containment remedy consisting of a slurry wall construction, soil cap, and a ground water recovery and treatment system; however, EPA has re-evaluated the 1985 ROD selection and determined that the containment remedy failed to meet the requirements of SARA. As a result, the ROD Amendment focuses on an alternative for treating Whitehouse wastes by eliminating direct contact risk associated with pit soil/sludge wastes and preventing contaminated ground water in the surficial aquifer from migrating laterally. The primary contaminants of concern that affect the soil, sediment, surface water, and ground water are VOCs, including benzene, toluene, and xylenes; organics, including PCBs and phenols; and metals, including arsenic, chromium, and lead. The amended remedial action for the site are included

  1. Effects of organic matter removal, soil compaction, and vegetation control on 5-year seedling performance: a regional comparison of long-term soil productivity sites

    Science.gov (United States)

    Robert L. Fleming; Robert F. Powers; Neil W. Foster; J. Marty Kranabetter; D. Andrew Scott; Felix Jr. Ponder; Shannon Berch; William K. Chapman; Richard D. Kabzems; Kim H. Ludovici; David M. Morris; Deborah S. Page-Dumroese; Paul T. Sanborn; Felipe G. Sanchez; Douglas M. Stone; Allan E. Tiarks

    2006-01-01

    We examined fifth-year seedling response to soil disturbance and vegetation control at 42 experimental locations representing 25 replicated studies within the North American Long-Term Soil Productivity (LTSP) program. These studies share a common experimental design while encompassing a wide range of climate, site conditions, and forest types. Whole-tree harvest had...

  2. Characterization of an apparently synonymous F5 mutation causing aberrant splicing and factor V deficiency.

    Science.gov (United States)

    Nuzzo, F; Bulato, C; Nielsen, B I; Lee, K; Wielders, S J; Simioni, P; Key, N S; Castoldi, E

    2015-03-01

    Coagulation factor V (FV) deficiency is a rare autosomal recessive bleeding disorder. We investigated a patient with severe FV deficiency (FV:C mutation in exon 4 (c.578G>C, p.Cys193Ser), predicting the abolition of a conserved disulphide bridge, and an apparently synonymous variant in exon 8 (c.1281C>G). The observation that half of the patient's F5 mRNA lacked the last 18 nucleotides of exon 8 prompted us to re-evaluate the c.1281C>G variant for its possible effects on splicing. Bioinformatics sequence analysis predicted that this transversion would activate a cryptic donor splice site and abolish an exonic splicing enhancer. Characterization in a F5 minigene model confirmed that the c.1281C>G variant was responsible for the patient's splicing defect, which could be partially corrected by a mutation-specific morpholino antisense oligonucleotide. The aberrantly spliced F5 mRNA, whose stability was similar to that of the normal mRNA, encoded a putative FV mutant lacking amino acids 427-432. Expression in COS-1 cells indicated that the mutant protein is poorly secreted and not functional. In conclusion, the c.1281C>G mutation, which was predicted to be translationally silent and hence neutral, causes FV deficiency by impairing pre-mRNA splicing. This finding underscores the importance of cDNA analysis for the correct assessment of exonic mutations. © 2014 John Wiley & Sons Ltd.

  3. A modelling study of the seasonal snowpack energy balance at three sites along the Andes Cordillera. Regional climate and local effects.

    Science.gov (United States)

    McPhee, James; Mengual, Sebastian; MacDonell, Shelley

    2017-04-01

    Seasonal snowpack melt constitutes the main water source for large portions of extratropical South America, including central Chile and Western Argentina. The properties and distribution of snow in the Andes are threatened by rapid climate change, characterised by warming and drying. This study provides a first attempt at detailed description of the energy balance of the seasonal snowpack and its variability along a latitudinal gradient, which is also correlated with an elevation and precipitation gradient, in the Andes Cordillera. The Snowpack model was validated at semi-arid, Mediterranean and temperate humid sites, where meteorological and snowpack properties have been observed since year 2013. Site elevations decrease from north to south, whereas precipitation climatology increases with latitude. Results show that turbulent energy exchange becomes relatively more important in periods of low snow accumulation, with sensible heat fluxes having a greater effect in cooling the snowpack at the high-altitude, low latitude site. Likewise, daily melt-freeze cycles are important in maintaining positive cold contents throughout the accumulation season at this site, and contribute to extending the duration of snow cover despite low accumulation and high radiation loads. In contrast, the southernmost, lowest elevation site shows smaller daily temperature amplitude and a much more preponderant radiation component to the energy balance. This modelling exercise highlights the nonlinearities of snow dynamics at different geographical settings in a sparsely monitored mountain area of the world, as well as the need for further understanding in order to evaluate the sensitivity of snow-dominated watersheds to global warming and climate change.

  4. Analysis of EFL Students' Ability in Reading Vocabulary of Synonyms and Antonyms

    Directory of Open Access Journals (Sweden)

    Vina Fathira

    2017-02-01

    Full Text Available Reading is an important thing for academic level. Every student must have many vocabularies to encourage her/his reading skill. The aim of this research is to analyze the students' understanding of reading vocabularies of synonyms and antonyms in the higher education level. Synonyms and antonyms are two important things should be mastered to get better reading comprehension. The method used in this research was quantitative with survey design. The population same as the sample of this research was from fifth semester students of STIBA Persada Bunda Pekanbaru. The procedures of the research were divided into 3 parts. First, students were asked to choose the best choice in the multiple choice for synonyms and anton, number and the wrong number, and grouped the wrong number into difficulties level. Last, the researcher analyzed the students' ability in reading vocabulary of synonyms and antonyms and concluded the result of students' ability in reading vocabulary of synonyms and antonyms in elementary, intermediate, and advanced level. The result of this research showed that the students' ability in reading vocabulary of synonyms and antonyms was categorized into "excellent" level with mean score 85. From the three difficulties level of question, the findings of this research were explained every level of question. In synonyms, the mean score of students' ability were 89, 85, and 84 for elementary, intermediate, and advanced level of question. Whereas, in antonyms, the mean score of students' ability were 97, 85, and 69 for elementary, intermediate, and advanced level of question.Keywords: students' ability, reading vocabulary, synonyms and antonyms

  5. Application of Saying, Synonyms, Antonyms, and Indonesian Dictionary Using Microsoft Visual Basic 6.0

    OpenAIRE

    Agus Budi Setyawan; Yudi Irawan Chandra, SKom, MMSI

    2005-01-01

    This writing describes the application of the proverb, synonym, antonym, and dictionaries Indonesian. Basically, this application to find out about the meaning of the proverb, synonym, antonym and meaning of the word in Indonesian. For that the author wanted to show them in computerized form using Microsoft Visual Basic 6.0. by presenting it in the form of computerized data that the authors hope that we get a more accurate or the possibility of error becomes smaller. Also expected this appli...

  6. Analysis of EFL Students' Ability in Reading Vocabulary of Synonyms and Antonyms

    OpenAIRE

    Vina Fathira

    2017-01-01

    Reading is an important thing for academic level. Every student must have many vocabularies to encourage her/his reading skill. The aim of this research is to analyze the students' understanding of reading vocabularies of synonyms and antonyms in the higher education level. Synonyms and antonyms are two important things should be mastered to get better reading comprehension. The method used in this research was quantitative with survey design. The population same as the sample of this researc...

  7. Life cycle assessment (LCA) as a decision-suppport tool for the evaluation of environmental impacts of site remediation on the global, regional and local scale

    DEFF Research Database (Denmark)

    Lemming, Gitte; Bulle, C.; Margni, Manuele

    2010-01-01

    Life cycle assessment (LCA) was used to compare the environment al impacts of three alternatives for remediating a TCE-contaminated site: (i) enhanced reductive dechlorination (ERD); (ii) in situ thermal desorption (ISTD) and (iii) excavation with off-site soil treatment. In addition......, the remediation alternatives were compared to a no action scenario, where only monitoring and natural attenuation takes place. A numerical reactive fracture model was used to predict the timeframes for the ERD and the no action scenarios. Moreover, the model was used to estimate the mass discharge of TCE...... of the LCA showed that of the three remediation methods compared, the ERD had the lowest total environmental impacts, even though it had significant primary impacts due to its long timeframe. The environmental impacts of ERD were comparable or only slightly higher than those of the no action scenario. ISTD...

  8. Superfund Record of Decision (EPA Region 5): Ossineke Groundwater Contamination Site, Alpena County, Ossineke, MI. (First remedial action), June 1991. Final report

    International Nuclear Information System (INIS)

    1991-01-01

    The Ossineke Ground Water Contamination site is an area overlying a contaminated aquifer in Ossineke, Alpena County, Michigan. The site hydrogeology is characterized by an upper aquifer and lower confined aquifer, both of which supply drinking water to local residents. Historically there have been two contaminant source areas of concern within Ossineke. Area 1 is in the center of the Town of Ossineke where two gas stations are located, consisting of underground storage tanks, and a former automobile rustproofing shop. Area 2 is a laundry and dry cleaning facility that has an associated wash water pond containing chlorinated hydrocarbons and VOCs. The State advised all users of the upper aquifer to stop using their wells. In 1982, the State discovered that a snow plow had hit a gasoline pump causing an unknown amount of gasoline to spill and, subsequently, contaminate the basements of several businesses. In 1986, the State replaced residential wells affected by ground water contamination. Because the contaminants of concern have been confirmed to be related to petroleum releases from underground storage tanks, the Superfund program does not have the authority to address cleanup under CERLCLA. The selected remedial action for the site is that no further action

  9. Superfund Record of Decision (EPA Region 5): Buckeye Reclamation Landfill Site, Belmont County, OH. (First remedial action), August 1991. Final report

    International Nuclear Information System (INIS)

    1991-01-01

    The 658-acre Buckeye Reclamation site contains a 50-acre former landfill in Richland Township, Belmont County, Ohio. Land use in the area is predominantly agricultural, rural residential, and strip mining. A total of 46 domestic wells and springs are located within 1 mile of the site. The original topography of the valley has been altered by coal mining and landfill operations. Solid industrial wastes also were disposed of with municipal wastes elsewhere in the landfill. In 1980, the Waste Pit was filled with sludge, mine spoil, and overburden soil; covered with soil and garbage; and seeded. Results of the RI indicate various levels of contamination in all media sampled, except air. The Record of Decision (ROD) addresses the remediation of contaminated leachate and ground water and eliminates exposure to contaminated surface soil. The primary contaminants of concern affecting the soil and ground water are VOCs including benzene, TCE, and toluene; other organics including PAHs; and metals including arsenic, chromium, beryllium, and lead. The selected remedial action for the site is included

  10. Regionalism, Regionalization and Regional Development

    Directory of Open Access Journals (Sweden)

    Liviu C. Andrei

    2016-03-01

    Full Text Available Sustained development is a concept associating other concepts, in its turn, in the EU practice, e.g. regionalism, regionalizing and afferent policies, here including structural policies. This below text, dedicated to integration concepts, will limit on the other hand to regionalizing, otherwise an aspect typical to Europe and to the EU. On the other hand, two aspects come up to strengthen this field of ideas, i.e. the region (al-regionalism-(regional development triplet has either its own history or precise individual outline of terms.

  11. The molecular complex associated with the Galactic H II region Sh2-90: a possible site of triggered star formation

    Science.gov (United States)

    Samal, M. R.; Zavagno, A.; Deharveng, L.; Molinari, S.; Ojha, D. K.; Paradis, D.; Tigé, J.; Pandey, A. K.; Russeil, D.

    2014-06-01

    Aims: We investigate the star formation activity in the molecular complex associated with the Galactic H ii region Sh2-90. Methods: We obtain the distribution of the ionized and cold neutral gas using radio-continuum and Herschel observations. We use near-infrared and Spitzer data to investigate the stellar content of the complex. We discuss the evolutionary status of embedded massive young stellar objects (MYSOs) using their spectral energy distribution. Results: The Sh2-90 region presents a bubble morphology in the mid-infrared. Radio observations suggest it is an evolved H ii region with an electron density ~144 cm-3, emission measure ~ 6.7 × 104 cm-6 pc and an ionized mass ~55 M⊙. From Herschel and CO (J = 3 - 2) observations we found that the H ii region is part of an elongated extended molecular cloud (H2 column density ≥ 3 × 1021 cm-2 and dust temperature 18-27 K) of total mass ≥ 1 × 104 M⊙. We identify the ionizing cluster of Sh2-90, the main exciting star being an O8-O9 V star. Five cold dust clumps, four mid-IR blobs around B stars, and a compact H ii region are found at the edge of the bubble. The velocity information derived from CO data cubes suggest that most of them are associated with the Sh2-90 region. One hundred and twenty-nine low mass (≤3 M⊙) YSOs have been identified, and they are found to be distributed mostly in the regions of high column density. Four candidate Class 0/I MYSOs have been found. We suggest that multi-generation star formation is present in the complex. From evidence of interaction, time scales involved, and evolutionary status of stellar/protostellar sources, we argue that the star formation at the edges of Sh2-90 might have been triggered. However, several young sources in this complex are probably formed by some other processes. Full Table 5 is only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (ftp://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/566/A122

  12. Expression of Aleutian mink disease parvovirus capsid proteins in defined segments: localization of immunoreactive sites and neutralizing epitopes to specific regions.

    Science.gov (United States)

    Bloom, M E; Martin, D A; Oie, K L; Huhtanen, M E; Costello, F; Wolfinbarger, J B; Hayes, S F; Agbandje-McKenna, M

    1997-01-01

    The capsid proteins of the ADV-G isolate of Aleutian mink disease parvovirus (ADV) were expressed in 10 nonoverlapping segments as fusions with maltose-binding protein in pMAL-C2 (pVP1, pVP2a through pVP2i). The constructs were designed to capture the VP1 unique sequence and the portions analogous to the four variable surface loops of canine parvovirus (CPV) in individual fragments (pVP2b, pVP2d, pVP2e, and pVP2g, respectively). The panel of fusion proteins was immunoblotted with sera from mink infected with ADV. Seropositive mink infected with either ADV-TR, ADV-Utah, or ADV-Pullman reacted preferentially against certain segments, regardless of mink genotype or virus inoculum. The most consistently immunoreactive regions were pVP2g, pVP2e, and pVP2f, the segments that encompassed the analogs of CPV surface loops 3 and 4. The VP1 unique region was also consistently immunoreactive. These findings indicated that infected mink recognize linear epitopes that localized to certain regions of the capsid protein sequence. The segment containing the hypervariable region (pVP2d), corresponding to CPV loop 2, was also expressed from ADV-Utah. An anti-ADV-G monoclonal antibody and a rabbit anti-ADV-G capsid antibody reacted exclusively with the ADV-G pVP2d segment but not with the corresponding segment from ADV-Utah. Mink infected with ADV-TR or ADV-Utah also preferentially reacted with the pVP2d sequence characteristic of that virus. These results suggested that the loop 2 region may contain a type-specific linear epitope and that the epitope may also be specifically recognized by infected mink. Heterologous antisera were prepared against the VP1 unique region and the four segments capturing the variable surface loops of CPV. The antisera against the proteins containing loop 3 or loop 4, as well as the anticapsid antibody, neutralized ADV-G infectivity in vitro and bound to capsids in immune electron microscopy. These results suggested that regions of the ADV capsid proteins

  13. Receptor type I and type II binding regions and the peptidyl-prolyl isomerase site of cyclophilin B are required for enhancement of T-lymphocyte adhesion to fibronectin.

    Science.gov (United States)

    Carpentier, Mathieu; Allain, Fabrice; Slomianny, Marie-Christine; Durieux, Sandrine; Vanpouille, Christophe; Haendler, Bernard; Spik, Geneviève

    2002-04-23

    Cyclophilin B (CyPB), a cyclosporin A (CsA) binding protein, interacts with two types of binding sites at the surface of T-lymphocytes. The type I sites correspond to functional receptors involved in endocytosis and the type II sites to sulfated glycosaminoglycans (GAGs). Mutational analysis of CyPB has revealed that W128, which is part of the CsA-binding pocket, is implicated in the binding to the functional type I receptors and that two amino acid clusters located in the N-terminus ensure the binding to GAGs. The peptidyl-prolyl isomerase activity of CyPB is not required for receptor binding. We have recently demonstrated that CyPB enhances adhesion of peripheral blood T-lymphocytes to fibronectin, a component of the extracellular matrix. We intended to identify additional amino acids involved in the binding of CyPB to its functional type I receptor and to determine regions responsible for the stimulation of peripheral blood T-lymphocyte adhesion. We determined that residues R76, G77, K132, D155, and D158 of the calcineurin (CN) interacting region were implicated in the recognition of type I receptor but not of GAGs. We also found that two different changes in the N-terminal extension that abated binding to GAGs prevented adhesion of peripheral blood T-lymphocytes to coated CyPB, whereas abbrogation of the PPIase activity had no effect. On the other hand, the adhesion of peripheral blood T-lymphocytes to coated fibronectin was not stimulated by CyPB mutants devoid of either type I receptor or GAGs binding activity or by mutants of the PPIase site. Altogether, the results demonstrate that different regions of CyPB are involved in peripheral blood T-lymphocyte activation and imply a novel important physiological function for peptidyl-prolyl isomerase activity.

  14. Data-Model Assimilation at the FACE and AmeriFlux Sites Toward Predictive Understanding of Carbon Sequestration at Ecosystem and Regional Scales

    Energy Technology Data Exchange (ETDEWEB)

    Luo, Yiqi [Univ. of Oklahoma, Norman, OK (United States)

    2013-01-09

    The project was conducted during the period from 9/1/2007 to 8/31/2011 with three major tasks: (1) development of data assimilation (DA) techniques for terrestrial carbon research; (2) applications of DA techniques to analysis of carbon cycle at Duke and other FACE sites; and (3) inverse analysis at AmeriFlux sites. During this period, we have developed a variety of techniques, including (1) ensemble Kalman filter to estimate model parameters or state variables (Gao et al. 2011), (2) Conditional inversion to estimate parameters of a carbon cycle model (Wu et al. 2009), and (3) various methods to quantify uncertainty of estimated parameters and predicted C sinks (e.g., Weng et al. 2011), and (4) information theory to evaluate information content of different model structures and data sets (Weng and Luo 2011). We applied the DA techniques to and did modeling at the Duke FACE and other global change experimental sites. We addressed the following issues: (1) interactive effects of CO2, warming and precipitation on ecosystem processes (e.g., Luo et al. 2008, Weng and Luo 2008, Zhou et al. 2008), (2) effects of warming on estimated parameters related to photosynthesis and residence times (Zhou et al. 2010); and (3) uncertainty in estimated parameters and predicted C sequestration (Gao et al. 2011, Weng and Luo 2011). In addition, we have done data assimilation to estimate carbon residence and carbon sequestration in US continent (Zhou and Luo 2008) and temperature sensitivity at the global scale (Zhou et al. 2009).

  15. Common non-synonymous SNPs associated with breast cancer susceptibility

    DEFF Research Database (Denmark)

    Milne, Roger L; Burwinkel, Barbara; Michailidou, Kyriaki

    2014-01-01

    Candidate variant association studies have been largely unsuccessful in identifying common breast cancer susceptibility variants, although most studies have been underpowered to detect associations of a realistic magnitude. We assessed 41 common non-synonymous single-nucleotide polymorphisms (ns......SNPs) for which evidence of association with breast cancer risk had been previously reported. Case-control data were combined from 38 studies of white European women (46 450 cases and 42 600 controls) and analyzed using unconditional logistic regression. Strong evidence of association was observed for three ns...... associations reached genome-wide statistical significance in a combined analysis of available data, including independent data from nine genome-wide association studies (GWASs): for ATXN7-K264R, OR = 1.07 (95% CI = 1.05-1.10, P = 1.0 × 10(-8)); for AKAP9-M463I, OR = 1.05 (95% CI = 1.04-1.07, P = 2.0 × 10...

  16. Summer Meal Sites

    Data.gov (United States)

    Allegheny County / City of Pittsburgh / Western PA Regional Data Center — Information pertaining to Summer Meal Sites, as collected by Citiparks in the City of Pittsburgh Department of Parks and Recreation. This dataset includes the...

  17. Genetic Diversity of Plasmodium falciparum Merozoite Surface Protein-1 Block 2 in Sites of Contrasting Altitudes and Malaria Endemicities in the Mount Cameroon Region

    OpenAIRE

    Wanji, Samuel; Kengne-Ouafo, Arnaud J.; Joan Eyong, Ebanga E.; Kimbi, Helen K.; Tendongfor, Nicholas; Ndamukong-Nyanga, Judith L.; Nana-Djeunga, Hugues C.; Bourguinat, Catherine; Sofeu-Feugaing, David D.; Charvet, Claude L.

    2012-01-01

    The present study analyzed the relationship between the genetic diversity of Plasmodium falciparum and parasitologic/entomologic indices in the Mount Cameroon region by using merozoite surface protein 1 as a genetic marker. Blood samples were collected from asymptomatic children from three altitude zones (high, intermediate, and low). Parasitologic and entomologic indices were determined by microscopy and landing catch mosquito collection/circumsporozoite protein–enzyme-linked immunosorbent a...

  18. Source apportionment of PM2.5 at the Lin'an regional background site in China with three receptor models

    Science.gov (United States)

    Deng, Junjun; Zhang, Yanru; Qiu, Yuqing; Zhang, Hongliang; Du, Wenjiao; Xu, Lingling; Hong, Youwei; Chen, Yanting; Chen, Jinsheng

    2018-04-01

    Source apportionment of fine particulate matter (PM2.5) were conducted at the Lin'an Regional Atmospheric Background Station (LA) in the Yangtze River Delta (YRD) region in China from July 2014 to April 2015 with three receptor models including principal component analysis combining multiple linear regression (PCA-MLR), UNMIX and Positive Matrix Factorization (PMF). The model performance, source identification and source contribution of the three models were analyzed and inter-compared. Source apportionment of PM2.5 was also conducted with the receptor models. Good correlations between the reconstructed and measured concentrations of PM2.5 and its major chemical species were obtained for all models. PMF resolved almost all masses of PM2.5, while PCA-MLR and UNMIX explained about 80%. Five, four and seven sources were identified by PCA-MLR, UNMIX and PMF, respectively. Combustion, secondary source, marine source, dust and industrial activities were identified by all the three receptor models. Combustion source and secondary source were the major sources, and totally contributed over 60% to PM2.5. The PMF model had a better performance on separating the different combustion sources. These findings improve the understanding of PM2.5 sources in background region.

  19. Nest-site selection and population trend of Collared Pratincoles (Glareola pratincola breeding in agricultural habitats of the Nagykunság region (Hungary

    Directory of Open Access Journals (Sweden)

    Kiss Ádám

    2017-06-01

    Full Text Available The Collared Pratincole (Glareola pratincola, which was once a typical breeding species of the sodic grasslands of the Great Plain, has become threatened with extinction from Hungary. It disappeared from the traditional grassland breeding sites before the 2000 and is currently breeding only in three sites in agricultural environments in Hungary. The objectives of our research were to find links between the use of shallow wetlands and the breeding behaviour of the species and to identify the characteristics of its breeding on ploughed fields. Data were collected between 2008 and 2016 as part of preparations for the conservation of the largest population which is found in the Nagykunság. We found a positive correlation between colony size and the area of the nearby wetland. We calculated the proportion of habitat-types used for nesting, and found that cultivated fields and fallow lands were the most important. Additionally, we also found that colony sizes were substantially smaller during the resea