Forest Typification to Characterize the Structure and Composition of Old-growth Evergreen Forests on Chiloe Island, North Patagonia (Chile

Directory of Open Access Journals (Sweden)

Jan R. Bannister

2013-11-01

Full Text Available The Evergreen forest type develops along the Valdivian and North-Patagonian phytogeographical regions of the south-central part of Chile (38° S–46° S. These evergreen forests have been scarcely studied south of 43° S, where there is still a large area made up of old-growth forests. Silvicultural proposals for the Evergreen forest type have been based on northern Evergreen forests, so that the characterization of the structure and composition of southern Evergreen forests, e.g., their typification, would aid in the development of appropriate silvicultural proposals for these forests. Based on the tree composition of 46 sampled plots in old-growth forests in an area of >1000 ha in southern Chiloé Island (43° S, we used multivariate analyses to define forest groups and to compare these forests with other evergreen forests throughout the Archipelago of North-Patagonia. We determined that evergreen forests of southern Chiloé correspond to the North-Patagonian temperate rainforests that are characterized by few tree species of different shade tolerance growing on fragile soils. We discuss the convenience of developing continuous cover forest management for these forests, rather than selective cuts or even-aged management that is proposed in the current legislation. This study is a contribution to forest classification for both ecologically- and forestry-oriented purposes.

Changes in sapwood permeability and anatomy with tree age and height in the broad-leaved evergreen species Eucalyptus regnans.

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England, Jacqueline R; Attiwill, Peter M

2007-08-01

Increases in plant size and structural complexity with increasing age have important implications for water flow through trees. Water supply to the crown is influenced by both the cross-sectional area and the permeability of sapwood. It has been hypothesized that hydraulic conductivity within sapwood increases with age. We investigated changes in sapwood permeability (k) and anatomy with tree age and height in the broad-leaved evergreen species Eucalyptus regnans F. Muell. Sapwood was sampled at breast height from trees ranging from 8 to 240 years old, and at three height positions on the main stem of 8-year-old trees. Variation in k was not significant among sampling height positions in young trees. However, k at breast height increased with tree age. This was related to increases in both vessel frequency and vessel diameter, resulting in a greater proportion of sapwood being occupied by vessel lumina. Sapwood hydraulic conductivity (the product of k and sapwood area) also increased with increasing tree age. However, at the stand level, there was a decrease in forest sapwood hydraulic conductivity with increasing stand age, because of a decrease in the number of trees per hectare. Across all ages, there were significant relationships between k and anatomy, with individual anatomical characteristics explaining 33-62% of the variation in k. There was also strong agreement between measured k and permeability predicted by the Hagen-Poiseuille equation. The results support the hypothesis of an increase in sapwood permeability at breast height with age. Further measurements are required to confirm this result at other height positions in older trees. The significance of tree-level changes in sapwood permeability for stand-level water relations is discussed.

Rare itemsets mining algorithm based on RP-Tree and spark framework

Science.gov (United States)

Liu, Sainan; Pan, Haoan

2018-05-01

For the issues of the rare itemsets mining in big data, this paper proposed a rare itemsets mining algorithm based on RP-Tree and Spark framework. Firstly, it arranged the data vertically according to the transaction identifier, in order to solve the defects of scan the entire data set, the vertical datasets are divided into frequent vertical datasets and rare vertical datasets. Then, it adopted the RP-Tree algorithm to construct the frequent pattern tree that contains rare items and generate rare 1-itemsets. After that, it calculated the support of the itemsets by scanning the two vertical data sets, finally, it used the iterative process to generate rare itemsets. The experimental show that the algorithm can effectively excavate rare itemsets and have great superiority in execution time.

'Linkage' pharmaceutical evergreening in Canada and Australia

Science.gov (United States)

Faunce, Thomas A; Lexchin, Joel

2007-01-01

'Evergreening' is not a formal concept of patent law. It is best understood as a social idea used to refer to the myriad ways in which pharmaceutical patent owners utilise the law and related regulatory processes to extend their high rent-earning intellectual monopoly privileges, particularly over highly profitable (either in total sales volume or price per unit) 'blockbuster' drugs. Thus, while the courts are an instrument frequently used by pharmaceutical brand name manufacturers to prolong their patent royalties, 'evergreening' is rarely mentioned explicitly by judges in patent protection cases. The term usually refers to threats made to competitors about a brand-name manufacturer's tactical use of pharmaceutical patents (including over uses, delivery systems and even packaging), not to extension of any particular patent over an active product ingredient. This article focuses in particular on the 'evergreening' potential of so-called 'linkage' provisions, imposed on the regulatory (safety, quality and efficacy) approval systems for generic pharmaceuticals of Canada and Australia, by specific articles in trade agreements with the US. These 'linkage' provisions have also recently appeared in the Korea-US Free Trade Agreement (KORUSFTA). They require such drug regulators to facilitate notification of, or even prevent, any potential patent infringement by a generic pharmaceutical manufacturer. This article explores the regulatory lessons to be learnt from Canada's and Australia's shared experience in terms of minimizing potential adverse impacts of such 'linkage evergreening' provisions on drug costs and thereby potentially on citizen's access to affordable, essential medicines. PMID:17543113

Why Do Some Evergreen Species Keep Their Leaves for a Second Winter, While Others Lose Them?

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Peter J. Grubb

2014-10-01

Full Text Available In subtropical montane semi-moist forest in SW China (SMSF, a large majority of evergreen tree and tall shrub species was found to have only one cohort of old leaves in early spring. In contrast, almost all species of evergreen tree and tall shrub in warm temperate rain forest (WTRF in Japan and sclerophylls in Mediterranean-climate forest (MSF of the Mediterranean Basin have two or more cohorts of old leaves in early spring; they drop their oldest cohort during or soon after leaf outgrowth in spring. Japanese WTRF has no dry season and MSF a dry summer. SMSF has a dry winter. On four evergreen Rhododendron species from SW China with only one cohort of old leaves in spring when in cultivation in Scotland, the majority of leaves in the senescing cohort fell by the end of December. We hypothesize that with dry winters, there is an advantage to dropping older leaves in autumn, because there is a low chance of appreciable positive assimilation in winter and a high chance of desiccation, reducing the resorption of dry mass and mineral nutrients from ageing leaves. Our hypothesis may be extended to cover evergreens at high altitude or high latitude that experience cold soils in winter.

Moisture availability constraints on the leaf area to sapwood area ratio: analysis of measurements on Australian evergreen angiosperm trees

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Togashi, Henrique; Prentice, Colin; Evans, Bradley; Forrester, David; Drake, Paul; Feikema, Paul; Brooksbank, Kim; Eamus, Derek; Taylor, Daniel

2014-05-01

The leaf area to sapwood area ratio (LA:SA) is a key plant trait that links photosynthesis to transpiration. Pipe model theory states that the sapwood cross-sectional area of a stem or branch at any point should scale isometrically with the area of leaves distal to that point. Optimization theory further suggests that LA:SA should decrease towards drier climates. Although acclimation of LA:SA to climate has been reported within species, much less is known about the scaling of this trait with climate among species. We compiled LA:SA measurements from 184 species of Australian evergreen angiosperm trees. The pipe model was broadly confirmed, based on measurements on branches and trunks of trees from one to 27 years old. We found considerable scatter in LA:SA among species. However quantile regression showed strong (0.2tree morphology.

Accuracy of LiDAR-based tree height estimation and crown recognition in a subtropical evergreen broad-leaved forest in Okinawa, Japan

Directory of Open Access Journals (Sweden)

Azita Ahmad Zawawi

2015-04-01

Full Text Available Aim of study: To present an approach for estimating tree heights, stand density and crown patches using LiDAR data in a subtropical broad-leaved forest. Area of study: The study was conducted within the Yambaru subtropical evergreen broad-leaved forest, Okinawa main island, Japan. Materials and methods: A digital canopy height model (CHM was extracted from the LiDAR data for tree height estimation and a watershed segmentation method was applied for the individual crown delineation. Dominant tree canopy layers were estimated using multi-scale filtering and local maxima detection. The LiDAR estimation results were then compared to the ground inventory data and a high resolution orthophoto image for accuracy assessment. Main results: A Wilcoxon matched pair test suggests that LiDAR data is highly capable of estimating tree height in a subtropical forest (z = 4.0, p = 0.345, but has limitation to detect small understory trees and a single tree delineation. The results show that there is a statistically significant different type of crown detection from LiDAR data over forest inventory (z = 0, p = 0.043. We also found that LiDAR computation results underestimated the stand density and overestimated the crown size. Research highlights: Most studies involving crown detection and tree height estimation have focused on the analysis of plantations, boreal forests and temperate forests, and less was conducted on tropical and/or subtropical forests. Our study tested the capability of LiDAR as an effective application for analyzing a highly dense forest

Systematic adaptive cluster sampling for the assessment of rare tree species in Nepal

NARCIS (Netherlands)

Acharya, B.; Bhattarai, G.; Gier, de A.; Stein, A.

2000-01-01

Sampling to assess rare tree species poses methodic problems, because they may cluster and many plots with no such trees are to be expected. We used systematic adaptive cluster sampling (SACS) to sample three rare tree species in a forest area of about 40 ha in Nepal. We checked its applicability

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Cerbera manghasL. (SEA MANGO) of Apocynaceae is a medium-sized evergreen coastal tree with milky latex. The bark is grey-brown, thick and ... Fruit is large. (5–10 cm long), oval containing two flattened seeds and resembles a mango, hence the name Mangas or. Manghas. Leaves and fruits contain ...

Understanding Seasonal Dynamics of the Photo-Protective Xanthophyll Cycle Improves Remote Detection of Photosynthetic Phenology in Deciduous Trees and Evergreen Conifers

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Ensminger, I.; Wong, C. Y.; Junker, L. V.; Bathena, Y.; Arain, M. A.; D'Odorico, P.

2017-12-01

The ability of plants to sequester carbon is highly variable over the course of the year and reflects seasonal variation in photosynthetic efficiency. This seasonal variation is most prominent during autumn, when leaves of deciduous tree species undergo senescence, which is associated with the downregulation of photosynthesis and a change of leaf color and leaf optical properties. Vegetation indices derived from remote sensing of leaf optical properties using e.g. spectral reflectance measurements are increasingly used to monitor and predict growing season length and seasonal variation in carbon sequestration. Here we compare leaf-level, canopy-level and drone based observations of leaf spectral reflectance measurements. We demonstrate that some of the widely used vegetation indices such as the normalized difference vegetation index (NDVI) and photochemical reflectance index (PRI) vary in their ability to adequately track the seasonal variation in photosynthetic efficiency and chlorophyll content. We further show that monitoring seasonal variation of photosynthesis using NDVI or PRI is particularly challenging in evergreen conifers, due to little seasonal variation in foliage. However, there is remarkable seasonal variation in leaf optical properties associated with changes in pools of xanthophyll cycle pigments and carotenoids that provide a promising way of monitoring photosynthetic phenology in evergreen conifers via leaf reflectance measurements.

Seasonality of weather and tree phenology in a tropical evergreen mountain rain forest.

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Bendix, J; Homeier, J; Cueva, E Ortiz; Emck, P; Breckle, S-W; Richter, M; Beck, E

2006-07-01

Flowering and fruiting as phenological events of 12 tree species in an evergreen tropical mountain rain forest in southern Ecuador were examined over a period of 3-4 years. Leaf shedding of two species was observed for 12 months. Parallel to the phenological recordings, meteorological parameters were monitored in detail and related to the flowering and fruiting activity of the trees. In spite of the perhumid climate of that area, a high degree of intra- and inter-specific synchronisation of phenological traits was apparent. With the exception of one species that flowered more or less continuously, two groups of trees could be observed, one of which flowered during the less humid months (September to October) while the second group started to initiate flowers towards the end of that phase and flowered during the heavy rains (April to July). As reflected by correlation coefficients, the all-time series of meteorological parameters showed a distinct seasonality of 8-12 months, apparently following the quasi-periodic oscillation of precipitation and related cloudiness. As revealed by power spectrum analysis and Markov persistence, rainfall and minimum temperature appear to be the only parameters with a periodicity free of long-term variations. The phenological events of most of the plant species showed a similar periodicity of 8-12 months, which followed the annual oscillation of relatively less and more humid periods and thus was in phase or in counter-phase with the oscillations of the meteorological parameters. Periods of unusual cold or dryness, presumably resulting from underlying longer-term trends or oscillations (such as ENSO), affected the homogeneity of quasi-12-month flowering events, fruit maturation and also the production of germinable seeds. Some species show underlying quasi-2-year-oscillations, for example that synchronise with the development of air temperature; others reveal an underlying decrease or increase in flowering activity over the

Community composition and cellulase activity of cellulolytic bacteria from forest soils planted with broad-leaved deciduous and evergreen trees.

Science.gov (United States)

Yang, Jiang-Ke; Zhang, Jing-Jing; Yu, Heng-Yu; Cheng, Jian-Wen; Miao, Li-Hong

2014-02-01

Cellulolytic bacteria in forest soil provide carbon sources to improve the soil fertility and sustain the nutrient balance of the forest ecological system through the decomposition of cellulosic remains. These bacteria can also be utilized for the biological conversion of biomass into renewable biofuels. In this study, the community compositions and activities of cellulolytic bacteria in the soils of forests planted with broad-leaved deciduous (Chang Qing Garden, CQG) and broad-leaved evergreen (Forest Park, FP) trees in Wuhan, China were resolved through restriction fragment length polymorphism (RFLP) and sequencing analysis of the 16S rRNA gene. All of the isolates exhibited 35 RFLP fingerprint patterns and were clustered into six groups at a similarity level of 50 %. The phylogeny analysis based on the 16S rRNA gene sequence revealed that these RFLP groups could be clustered into three phylogenetic groups and further divided into six subgroups at a higher resolution. Group I consists of isolates from Bacillus cereus, Bacillus subtilis complex (I-A) and from Paenibacillus amylolyticus-related complex (I-B) and exhibited the highest cellulase activity among all of the cellulolytic bacteria isolates. Cluster II consists of isolates belonging to Microbacterium testaceum (II-A), Chryseobacterium indoltheticum (II-B), and Flavobacterium pectinovorum and the related complex (II-C). Cluster III consists of isolates belonging to Pseudomonas putida-related species. The community shift with respect to the plant species and the soil properties was evidenced by the phylogenetic composition of the communities. Groups I-A and I-B, which account for 36.0 % of the cellulolytic communities in the CQG site, are the dominant groups (88.4 %) in the FP site. Alternatively, the ratio of the bacteria belonging to group III (P. putida-related isolates) shifted from 28.0 % in CQG to 4.0 % in FP. The soil nutrient analysis revealed that the CQG site planted with deciduous broad

Ecophysiological and biochemical strategies of response to ozone in Mediterranean evergreen broadleaf species

Science.gov (United States)

Nali, C.; Paoletti, E.; Marabottini, R.; Della Rocca, G.; Lorenzini, G.; Paolacci, A. R.; Ciaffi, M.; Badiani, M.

Three Mediterranean shrubs, Phillyrea latifolia L. (phillyrea), Arbutus unedo L. (strawberry tree), and Laurus nobilis L. (laurel), differing in their morphological and ecological response to water shortage, were exposed for 90 days to 0 or 110 ppb of ozone (O 3), 5 h each day. This yielded an accumulated exposure over of a threshold of 40 ppb (AOT40) of 31.5 ppm h over the 3 months experiment. These species showed differing responses to O 3: laurel and phillyrea developed foliar chlorotic mottles on the adaxial surface of leaves, whereas strawberry tree leaves showed reddish interveinal stipple-like necrotic lesions. In all cases, however, foliar injury did not exceed 8% of the sampled leaf area. At the end of the exposure period, O 3-induced stomatal limitation caused significant decreases of net photosynthesis in strawberry tree and laurel, but not in phillyrea. The relative water content of the leaves was significantly decreased by O 3, especially in laurel and strawberry tree, suggesting the occurrence of drought stress. Electrical conductivity of leachates from foliar discs increased in response to the treatment, much more strongly in laurel and in strawberry tree than in phillyrea, suggesting an O 3-dependent alteration of the membrane retention capacity. At the end of the experimental period, the activity of superoxide dismutase and the content of reduced glutathione, but not that of reduced ascorbate, were significantly increased in the ozonated leaves of strawberry tree and phillyrea, but not in laurel. The evergreen broadleaves studied here maybe relatively tolerant to realistic O 3 levels, at least in terms of visible injury and gas exchange. Such tolerance might overlap with their level of tolerance to drought stress. High constitutive levels, and/or O 3-induced increases in antioxidants, might contribute to O 3 tolerance in these Mediterranean evergreen broadleaf species.

Flowering Trees

Indian Academy of Sciences (India)

Berrya cordifolia (Willd.) Burret (Syn. B. ammonilla Roxb.) – Trincomali Wood of Tiliaceae is a tall evergreen tree with straight trunk, smooth brownish-grey bark and simple broad leaves. Inflorescence is much branched with white flowers. Stamens are many with golden yellow anthers. Fruit is a capsule with six spreading ...

Flowering Trees

Indian Academy of Sciences (India)

Andira inermis (wright) DC. , Dog Almond of Fabaceae is a handsome lofty evergreen tree. Leaves are alternate and pinnately compound with 4–7 pairs of leaflets. Flowers are fragrant and are borne on compact branched inflorescences. Fruit is ellipsoidal one-seeded drupe that is peculiar to members of this family.

Flowering Trees

Indian Academy of Sciences (India)

IAS Admin

Aglaia elaeagnoidea (A.Juss.) Benth. of Meliaceae is a small-sized evergreen tree of both moist and dry deciduous forests. The leaves are alternate and pinnately compound, terminating in a single leaflet. Leaflets are more or less elliptic with entire margin. Flowers are small on branched inflorescence. Fruit is a globose ...

Mimusops elengi L. (Bulletwood tree; Hindi: Bakul or Maulsari) of ...

Indian Academy of Sciences (India)

Mimusops elengi L. (Bulletwood tree; Hindi: Bakul or Maulsari) of Sapotaceae is a handsome evergreen tree with milky latex and tender vegetative parts covered with brown hairs. The tree is often cultivated in parks and as an avenue tree. The fascicled flowers are small, white and sweet-scented. The ovoid berries are ...

Inferring phylogenetic trees from the knowledge of rare evolutionary events.

Science.gov (United States)

Hellmuth, Marc; Hernandez-Rosales, Maribel; Long, Yangjing; Stadler, Peter F

2018-06-01

Rare events have played an increasing role in molecular phylogenetics as potentially homoplasy-poor characters. In this contribution we analyze the phylogenetic information content from a combinatorial point of view by considering the binary relation on the set of taxa defined by the existence of a single event separating two taxa. We show that the graph-representation of this relation must be a tree. Moreover, we characterize completely the relationship between the tree of such relations and the underlying phylogenetic tree. With directed operations such as tandem-duplication-random-loss events in mind we demonstrate how non-symmetric information constrains the position of the root in the partially reconstructed phylogeny.

Flowering Trees

Indian Academy of Sciences (India)

mid-sized slow-growing evergreen tree with spreading branches that form a dense crown. The bark is smooth, thick, dark and flakes off in large shreds. Leaves are thick, oblong, leathery and bright red when young. The female flowers are drooping and are larger than male flowers. Fruit is large, red in color and velvety.

Soil cover by natural trees in agroforestry systems

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Diaz-Ambrona, C. G. H.; Almoguera Millán, C.; Tarquis Alfonso, A.

2009-04-01

The dehesa is common agroforestry system in the Iberian Peninsula. These open oak parklands with silvo-pastoral use cover about two million hectares. Traditionally annual pastures have been grazed by cows, sheep and also goats while acorns feed Iberian pig diet. Evergreen oak (Quercus ilex L.) has other uses as fuelwood collection and folder after tree pruning. The hypothesis of this work is that tree density and canopy depend on soil types. We using the spanish GIS called SIGPAC to download the images of dehesa in areas with different soil types. True colour images were restoring to a binary code, previously canopy colour range was selected. Soil cover by tree canopy was calculated and number of trees. Processing result was comparable to real data. With these data we have applied a dynamic simulation model Dehesa to determine evergreen oak acorn and annual pasture production. The model Dehesa is divided into five submodels: Climate, Soil, Evergreen oak, Pasture and Grazing. The first three require the inputs: (i) daily weather data (maximum and minimum temperatures, precipitation and solar radiation); (ii) the soil input parameters for three horizons (thickness, field capacity, permanent wilting point, and bulk density); and (iii) the tree characterization of the dehesa (tree density, canopy diameter and height, and diameter of the trunk). The influence of tree on pasture potential production is inversely proportional to the canopy cover. Acorn production increase with tree canopy cover until stabilizing itself, and will decrease if density becomes too high (more than 80% soil tree cover) at that point there is competition between the trees. Main driving force for dehesa productivity is soil type for pasture, and tree cover for acorn production. Highest pasture productivity was obtained on soil Dystric Planosol (Alfisol), Dystric Cambisol and Chromo-calcic-luvisol, these soils only cover 22.4% of southwest of the Iberian peninssula. Lowest productivity was

Different Patterns of Changes in the Dry Season Diameter at Breast Height of Dominant and Evergreen Tree Species in a Mature Subtropical Forest in South China

Institute of Scientific and Technical Information of China (English)

Jun-Hua Yan; Guo-Yi Zhou; De-Qiang Zhang; Xu-Li Tang; Xu Wang

2006-01-01

Information on changes in diameter at breast height (DBH) is important for net primary production (NPP)estimates, timing of forest inventory, and forest management. In the present study, patterns of DBH change were measured under field conditions during the dry season for three dominant and native tree species in a monsoon evergreen broad-leaved forest in the Dinghushan Biosphere Reserve. For each tree species,different patterns of DBH change were observed. In the case of the fast-growing tree species Castanopsis chinensis Hance, large diurnal fluctuations occur, with a peak DBH in the early morning (around 05:00 h) that decreases to a minimum by about 14:00 h. Both Schima superba Gardn. et Chemp and Cryptocarya chinensis (Hance) Hemsl. exhibited less diurnal swelling and shrinkage. Diurnal fluctuations for these species were observed on a few occasions over the period of observation. Graphical comparisons and statistical analysis of changes in DBH with meteorological variables indicate that for different trees, the different changes in DBH observed responded to different meteorological variables. Large stem changes were found to occur for Ca. chinensis trees that were associated with variations in solar radiation. However, both S. superba and Cr. chinensis were found to be less sensitive to solar radiation. Changes in the DBH of these two species were found to be controlled mainly by soil temperature and soil moisture. During the later dry season, with a lower soil temperature and soil moisture, all three tree species stopped growing and only negligible shrinkage, expansion, or fluctuation occurred, suggesting that the optimum time to measure tree growth in the Dinghushan Biosphere Reserve is the later dry season.

A climate change-induced threat to the ecological resilience of a subtropical monsoon evergreen broad-leaved forest in Southern China.

Science.gov (United States)

Zhou, Guoyi; Peng, Changhui; Li, Yuelin; Liu, Shizhong; Zhang, Qianmei; Tang, Xuli; Liu, Juxiu; Yan, Junhua; Zhang, Deqiang; Chu, Guowei

2013-04-01

Recent studies have suggested that tropical forests may not be resilient against climate change in the long term, primarily owing to predicted reductions in rainfall and forest productivity, increased tree mortality, and declining forest biomass carbon sinks. These changes will be caused by drought-induced water stress and ecosystem disturbances. Several recent studies have reported that climate change has increased tree mortality in temperate and boreal forests, or both mortality and recruitment rates in tropical forests. However, no study has yet examined these changes in the subtropical forests that account for the majority of China's forested land. In this study, we describe how the monsoon evergreen broad-leaved forest has responded to global warming and drought stress using 32 years of data from forest observation plots. Due to an imbalance in mortality and recruitment, and changes in diameter growth rates between larger and smaller trees and among different functional groups, the average DBH of trees and forest biomass have decreased. Sap flow measurements also showed that larger trees were more stressed than smaller trees by the warming and drying environment. As a result, the monsoon evergreen broad-leaved forest community is undergoing a transition from a forest dominated by a cohort of fewer and larger individuals to a forest dominated by a cohort of more and smaller individuals, with a different species composition, suggesting that subtropical forests are threatened by their lack of resilience against long-term climate change. © 2012 Blackwell Publishing Ltd.

The transitional semi-evergreen bushland in Ethiopia

DEFF Research Database (Denmark)

van Breugel, Paulo; Friis, Ib; Sebsebe, Demissew

2016-01-01

Question: Evergreen bushlands in Ethiopia have been inadequately studied and mapped. We address the question whether there is a transitional semi-ever-green bushland on the eastern escarpment of the Ethiopian Highlands, with unique floristic characteristics that distinguish it from the evergreen...... bushlands in other parts of Ethiopia and eastern Africa. Methods: Based on a review of the recent descriptions of evergreen bushlands in Ethiopia, we hypothesize that there is a distinct zone of natural semi-ever-green bushland, which is restricted to the eastern and southeastern escarpment of the Ethiopian...... Highlands. In contrast, evergreen bushlands in other parts of Ethiopia are considered to be of a secondary nature. To test this hypothesis, we carried out qualitative vegetation surveys in 354 locations across Ethiopia and classified the vegetation in these locations based on the occurrences of indicator...

The temporal response to drought in a Mediterranean evergreen tree: comparing a regional precipitation gradient and a throughfall exclusion experiment.

Science.gov (United States)

Martin-Stpaul, Nicolas K; Limousin, Jean-Marc; Vogt-Schilb, Hélène; Rodríguez-Calcerrada, Jesus; Rambal, Serge; Longepierre, Damien; Misson, Laurent

2013-08-01

Like many midlatitude ecosystems, Mediterranean forests will suffer longer and more intense droughts with the ongoing climate change. The responses to drought in long-lived trees differ depending on the time scale considered, and short-term responses are currently better understood than longer term acclimation. We assessed the temporal changes in trees facing a chronic reduction in water availability by comparing leaf-scale physiological traits, branch-scale hydraulic traits, and stand-scale biomass partitioning in the evergreen Quercus ilex across a regional precipitation gradient (long-term changes) and in a partial throughfall exclusion experiment (TEE, medium term changes). At the leaf scale, gas exchange, mass per unit area and nitrogen concentration showed homeostatic responses to drought as they did not change among the sites of the precipitation gradient or in the experimental treatments of the TEE. A similar homeostatic response was observed for the xylem vulnerability to cavitation at the branch scale. In contrast, the ratio of leaf area over sapwood area (LA/SA) in young branches exhibited a transient response to drought because it decreased in response to the TEE the first 4 years of treatment, but did not change among the sites of the gradient. At the stand scale, leaf area index (LAI) decreased, and the ratios of stem SA to LAI and of fine root area to LAI both increased in trees subjected to throughfall exclusion and from the wettest to the driest site of the gradient. Taken together, these results suggest that acclimation to chronic drought in long-lived Q. ilex is mediated by changes in hydraulic allometry that shift progressively from low (branch) to high (stand) organizational levels, and act to maintain the leaf water potential within the range of xylem hydraulic function and leaf photosynthetic assimilation. © 2013 John Wiley & Sons Ltd.

Increasing carbon discrimination rates and depth of water uptake favor the growth of Mediterranean evergreen trees in the ecotone with temperate deciduous forests.

Science.gov (United States)

Barbeta, Adrià; Peñuelas, Josep

2017-12-01

Tree populations at the low-altitudinal or -latitudinal limits of species' distributional ranges are predicted to retreat toward higher altitudes and latitudes to track the ongoing changes in climate. Studies have focused on the climatic sensitivity of the retreating species, whereas little is known about the potential replacements. Competition between tree species in forest ecotones will likely be strongly influenced by the ecophysiological responses to heat and drought. We used tree-ring widths and δ 13 C and δ 18 O chronologies to compare the growth rates and long-term ecophysiological responses to climate in the temperate-Mediterranean ecotone formed by the deciduous Fagus sylvatica and the evergreen Quercus ilex at the low altitudinal and southern latitudinal limit of F. sylvatica (NE Iberian Peninsula). F. sylvatica growth rates were similar to those of other southern populations and were surprisingly not higher than those of Q. ilex, which were an order of magnitude higher than those in nearby drier sites. Higher Q. ilex growth rates were associated with high temperatures, which have increased carbon discrimination rates in the last 25 years. In contrast, stomatal regulation in F. sylvatica was proportional to the increase in atmospheric CO 2 . Tree-ring δ 18 O for both species were mostly correlated with δ 18 O in the source water. In contrast to many previous studies, relative humidity was not negatively correlated with tree-ring δ 18 O but had a positive effect on Q. ilex tree-ring δ 18 O. Furthermore, tree-ring δ 18 O decreased in Q. ilex over time. The sensitivity of Q. ilex to climate likely reflects the uptake of deep water that allowed it to benefit from the effect of CO 2 fertilization, in contrast to the water-limited F. sylvatica. Consequently, Q. ilex is a strong competitor at sites currently dominated by F. sylvatica and could be favored by increasingly warmer conditions. © 2017 John Wiley & Sons Ltd.

Identifying the best season for mapping evergreen swamp and mangrove species using leaf-level spectra in an estuarine system in KwaZulu-Natal, South Africa

CSIR Research Space (South Africa)

Van Deventer, Heidi

2014-10-01

Full Text Available would provide the best discrimination of six evergreen tree species, associated with swamp (Ficus Trichopoda), mangrove (Avicennia marina, Bruguiera gymnorrhiza, Hibiscus tiliaceus), wetlands in adjacent woodlands (Syzygium cordatum) and coastal...

Potential Effects of Climate Change on the Distribution of Cold-Tolerant Evergreen Broadleaved Woody Plants in the Korean Peninsula.

Directory of Open Access Journals (Sweden)

Kyung Ah Koo

Full Text Available Climate change has caused shifts in species' ranges and extinctions of high-latitude and altitude species. Most cold-tolerant evergreen broadleaved woody plants (shortened to cold-evergreens below are rare species occurring in a few sites in the alpine and subalpine zones in the Korean Peninsula. The aim of this research is to 1 identify climate factors controlling the range of cold-evergreens in the Korean Peninsula; and 2 predict the climate change effects on the range of cold-evergreens. We used multimodel inference based on combinations of climate variables to develop distribution models of cold-evergreens at a physiognomic-level. Presence/absence data of 12 species at 204 sites and 6 climatic factors, selected from among 23 candidate variables, were used for modeling. Model uncertainty was estimated by mapping a total variance calculated by adding the weighted average of within-model variation to the between-model variation. The range of cold-evergreens and model performance were validated by true skill statistics, the receiver operating characteristic curve and the kappa statistic. Climate change effects on the cold-evergreens were predicted according to the RCP 4.5 and RCP 8.5 scenarios. Multimodel inference approach excellently projected the spatial distribution of cold-evergreens (AUC = 0.95, kappa = 0.62 and TSS = 0.77. Temperature was a dominant factor in model-average estimates, while precipitation was minor. The climatic suitability increased from the southwest, lowland areas, to the northeast, high mountains. The range of cold-evergreens declined under climate change. Mountain-tops in the south and most of the area in the north remained suitable in 2050 and 2070 under the RCP 4.5 projection and 2050 under the RCP 8.5 projection. Only high-elevations in the northeastern Peninsula remained suitable under the RCP 8.5 projection. A northward and upper-elevational range shift indicates change in species composition at the alpine and

Potential Effects of Climate Change on the Distribution of Cold-Tolerant Evergreen Broadleaved Woody Plants in the Korean Peninsula.

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Koo, Kyung Ah; Kong, Woo-Seok; Nibbelink, Nathan P; Hopkinson, Charles S; Lee, Joon Ho

2015-01-01

Climate change has caused shifts in species' ranges and extinctions of high-latitude and altitude species. Most cold-tolerant evergreen broadleaved woody plants (shortened to cold-evergreens below) are rare species occurring in a few sites in the alpine and subalpine zones in the Korean Peninsula. The aim of this research is to 1) identify climate factors controlling the range of cold-evergreens in the Korean Peninsula; and 2) predict the climate change effects on the range of cold-evergreens. We used multimodel inference based on combinations of climate variables to develop distribution models of cold-evergreens at a physiognomic-level. Presence/absence data of 12 species at 204 sites and 6 climatic factors, selected from among 23 candidate variables, were used for modeling. Model uncertainty was estimated by mapping a total variance calculated by adding the weighted average of within-model variation to the between-model variation. The range of cold-evergreens and model performance were validated by true skill statistics, the receiver operating characteristic curve and the kappa statistic. Climate change effects on the cold-evergreens were predicted according to the RCP 4.5 and RCP 8.5 scenarios. Multimodel inference approach excellently projected the spatial distribution of cold-evergreens (AUC = 0.95, kappa = 0.62 and TSS = 0.77). Temperature was a dominant factor in model-average estimates, while precipitation was minor. The climatic suitability increased from the southwest, lowland areas, to the northeast, high mountains. The range of cold-evergreens declined under climate change. Mountain-tops in the south and most of the area in the north remained suitable in 2050 and 2070 under the RCP 4.5 projection and 2050 under the RCP 8.5 projection. Only high-elevations in the northeastern Peninsula remained suitable under the RCP 8.5 projection. A northward and upper-elevational range shift indicates change in species composition at the alpine and subalpine

Seed rain, soil seed bank, seed loss and regeneration of Castanopsis fargesii (Fagaceae) in a subtropical evergreen broad-leaved forest

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Xiaojun Du; Qinfeng Guo; Xianming Gao; Keping Na

2007-01-01

Understanding the seed rain and seed loss dynamics in the natural condition has important significance for revealing the natural regeneration mechanisms.We conducted a 3-year field observation on seed rain, seed loss and natural regeneration of Castanopsis fargesii Franch., a dominant tree species in evergreen broad-leaved forests in Dujiangyan,...

Effect of Severe Winter Cold on the Photosynthetic Potentials of Three Co-occurring Evergreen Woody Species in a Mediterranean Forest, Catalonia (Spain)

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Sperlich, Dominik; Gracia, Carlos; Peñuelas, Josep; Sabaté, Santi

2013-04-01

Evergreen tree species in the Mediterranean region have to cope with a wide range of environmental stress conditions from summer drought to winter cold. The winter period can lead to photoinhibition due to a combination of high solar irradiances and chilling temperatures which can reduce the light saturation point. However, Mediterranean winter mildness can lead periodically to favourable environmental conditions above the threshold for positive carbon balance benefitting evergreen woody species in contrast to winter deciduous species. The advantage of being able to photosynthesis all year round with a significant fraction in the winter month is compensating for the lower photosynthetic potentials during spring and summer in comparison to deciduous species. In this work, we investigated the physiological behaviour of three evergreen tree species (Quercus ilex, Pinus halepensis, Arbutus undeo) co-occurring in a natural and mature Mediterranean forest after a period of mild winter conditions and their response to a sudden period of intense cold weather. Therefore, we examined in each period the photosynthetic potentials by estimating the maximum carboxylation rate (Vcmax) and the maximum electron transport rate (Jmax) through gas exchange measurements. The results indicate that all species exhibited extraordinary high photosynthetic potentials during the first period of measurement as a response to the mild conditions. However, the sudden cold period affected negatively the photosynthetic potentials of Quercus ilex and A. unedo with reduction ranging between 37 to 45 %, whereas they were observed to be only insignificantly reduced in Pinus halepensis. Our results can be explained by previous classifications into photoinhibition-avoiding (P. halpensis) and photoinhibition-tolerant (Q. ilex, A. undeo) species on the basis of their susceptibility to dynamic photoinhibition (Martinez Ferri 2000). Photoinhibition tolerant species are characterised with a more dynamic

Divergent Hydraulic Safety Strategies in Three Co-occurring Anacardiaceae Tree Species in a Chinese Savanna.

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Zhang, Shu-Bin; Zhang, Jiao-Lin; Cao, Kun-Fang

2016-01-01

Vulnerability segmentation, the condition under which plant leaves are more vulnerable to drought-induced cavitation than stems, may act as a "safety valve" to protect stems from hydraulic failure. Evergreen, winter-deciduous, and drought-deciduous tree species co-occur in tropical savannas, but there have been no direct studies on the role of vulnerability segmentation and stomatal regulation in maintaining hydraulic safety in trees with these three leaf phenologies. To this end, we selected three Anacardiaceae tree species co-occurring in a Chinese savanna, evergreen Pistacia weinmanniifolia , drought-deciduous Terminthia paniculata , and winter-deciduous Lannea coromandelica , to study inter-species differentiation in leaf and stem hydraulic safety. We found that the two deciduous species had significantly higher sapwood-specific hydraulic conductivity and leaf-specific hydraulic conductance than the evergreen species. Moreover, two deciduous species were more vulnerable to stem cavitation than the evergreen species, although both drought-deciduous species and evergreen species had drought-resistance leaves. The evergreen species maintained a wide hydraulic safety margin (HSM) in stems and leaves; which was achieved by embolism resistance of both stems and leaves and isohydric stomatal control. Both deciduous species had limited HSMs in stems and leaves, being isohydric in the winter-deciduous species and anisohydric in drought-deciduous species. The difference in water potential at 50% loss of hydraulic conductivity between the leaves and the terminal stems (P50 leaf-stem ) was positive in P. weinmanniifolia and L. coromandelica , whereas, T. paniculata exhibited a lack of vulnerability segmentation. In addition, differences in hydraulic architecture were found to be closely related to other structural traits, i.e., leaf mass per area, wood density, and sapwood anatomy. Overall, the winter-deciduous species exhibits a drought-avoidance strategy that maintains

Predicting vegetation type through physiological and environmental interactions with leaf traits: evergreen and deciduous forests in an earth system modeling framework.

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Weng, Ensheng; Farrior, Caroline E; Dybzinski, Ray; Pacala, Stephen W

2017-06-01

Earth system models are incorporating plant trait diversity into their land components to better predict vegetation dynamics in a changing climate. However, extant plant trait distributions will not allow extrapolations to novel community assemblages in future climates, which will require a mechanistic understanding of the trade-offs that determine trait diversity. In this study, we show how physiological trade-offs involving leaf mass per unit area (LMA), leaf lifespan, leaf nitrogen, and leaf respiration may explain the distribution patterns of evergreen and deciduous trees in the temperate and boreal zones based on (1) an evolutionary analysis of a simple mathematical model and (2) simulation experiments of an individual-based dynamic vegetation model (i.e., LM3-PPA). The evolutionary analysis shows that these leaf traits set up a trade-off between carbon- and nitrogen-use efficiency at the scale of individual trees and therefore determine competitively dominant leaf strategies. As soil nitrogen availability increases, the dominant leaf strategy switches from one that is high in nitrogen-use efficiency to one that is high in carbon-use efficiency or, equivalently, from high-LMA/long-lived leaves (i.e., evergreen) to low-LMA/short-lived leaves (i.e., deciduous). In a region of intermediate soil nitrogen availability, the dominant leaf strategy may be either deciduous or evergreen depending on the initial conditions of plant trait abundance (i.e., founder controlled) due to feedbacks of leaf traits on soil nitrogen mineralization through litter quality. Simulated successional patterns by LM3-PPA from the leaf physiological trade-offs are consistent with observed successional dynamics of evergreen and deciduous forests at three sites spanning the temperate to boreal zones. © 2016 John Wiley & Sons Ltd.

Elevated ozone negatively affects photosynthesis of current-year leaves but not previous-year leaves in evergreen Cyclobalanopsis glauca seedlings

International Nuclear Information System (INIS)

Zhang, Weiwei; Feng, Zhaozhong; Wang, Xiaoke; Niu, Junfeng

2014-01-01

To assess the effects of leaf age/layer on the response of photosynthesis to chronic ozone (O 3 ), Cyclobalanopsis glauca seedlings, a dominant evergreen broadleaf tree species in sub-tropical regions, were exposed to either ambient air (AA) or elevated O 3 (AA + 60 ppb O 3 , E-O 3 ) for two growing seasons in open-top chambers. Chlorophyll content, gas exchange and chlorophyll a fluorescence were investigated three times throughout the 2nd year of O 3 exposure. Results indicated that E-O 3 decreased photosynthetic parameters, particularly light-saturated photosynthesis rate, stomatal conductance and effective quantum yield of PSII photochemistry of current-year leaves but not previous-year leaves. Stomatal conductance of plants grown under ambient conditions partially contributed to the different response to E-O 3 between leaf layers. Light radiation or other physiological and biochemical processes closely related to photosynthesis might play important roles. All suggested that leaf ages or layers should be considered when assessing O 3 risk on evergreen woody species. -- Highlights: • Response of evergreen Cyclobalanopsis glauca to O 3 was investigated. • Elevated O 3 significantly reduced photosynthesis of current-year leaves. • Previous-year leaves showed little response to O 3 . • Stomatal conductance contributes to the response difference to O 3 among leaf ages. -- Impacts of elevated O 3 on photosynthesis of evergreen woody species depend on leaf ages

Azadirachta indica A. Juss. (English: Margosa or Neem tree; Hindi ...

Indian Academy of Sciences (India)

(English: Margosa or Neem tree; Hindi: Neem) ofMeliaceae a large evergreen tree with spreading crown and brownish bark is either pLanted or se(f-sown. Leaves are compound and the LeafLets are somewhat oblique with toothed margin. Flowers are small and white and borne on branched inflorescence. Fruit is about ...

Patterns of leaf morphology and leaf N content in relation to winter temperatures in three evergreen tree species

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Mediavilla, Sonia; Gallardo-López, Victoria; González-Zurdo, Patricia; Escudero, Alfonso

2012-09-01

The competitive equilibrium between deciduous and perennial species in a new scenario of climate change may depend closely on the productivity of leaves along the different seasons of the year and on the morphological and chemical adaptations required for leaf survival during the different seasons. The aim of the present work was to analyze such adaptations in the leaves of three evergreen species ( Quercus ilex, Q. suber and Pinus pinaster) and their responses to between-site differences in the intensity of winter harshness. We explore the hypothesis that the harshness of winter would contribute to enhancing the leaf traits that allow them to persist under conditions of stress. The results revealed that as winter harshness increases a decrease in leaf size occurs in all three species, together with an increase in the content of nitrogen per unit leaf area and a greater leaf mass per unit area, which seems to be achieved only through increased thickness, with no associated changes in density. P. pinaster was the species with the most intense response to the harshening of winter conditions, undergoing a more marked thickening of its needles than the two Quercus species. Our findings thus suggest that lower winter temperatures involve an increase in the cost of leaf production of evergreen species, which must be taken into account in the estimation of the final cost and benefit balance of evergreens. Such cost increases would be more pronounced for those species that, like P. pinaster, show a stronger response to the winter cold.

A remotely sensed pigment index reveals photosynthetic phenology in evergreen conifers.

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Gamon, John A; Huemmrich, K Fred; Wong, Christopher Y S; Ensminger, Ingo; Garrity, Steven; Hollinger, David Y; Noormets, Asko; Peñuelas, Josep

2016-11-15

In evergreen conifers, where the foliage amount changes little with season, accurate detection of the underlying "photosynthetic phenology" from satellite remote sensing has been difficult, presenting challenges for global models of ecosystem carbon uptake. Here, we report a close correspondence between seasonally changing foliar pigment levels, expressed as chlorophyll/carotenoid ratios, and evergreen photosynthetic activity, leading to a "chlorophyll/carotenoid index" (CCI) that tracks evergreen photosynthesis at multiple spatial scales. When calculated from NASA's Moderate Resolution Imaging Spectroradiometer satellite sensor, the CCI closely follows the seasonal patterns of daily gross primary productivity of evergreen conifer stands measured by eddy covariance. This discovery provides a way of monitoring evergreen photosynthetic activity from optical remote sensing, and indicates an important regulatory role for carotenoid pigments in evergreen photosynthesis. Improved methods of monitoring photosynthesis from space can improve our understanding of the global carbon budget in a warming world of changing vegetation phenology.

Photosynthesis and photosynthetic electron flow in the alpine evergreen species Quercus guyavifolia in winter

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Wei Huang

2016-10-01

Full Text Available Alpine evergreen broadleaf tree species must regularly cope with low night temperatures in winter. However, the effects of low night temperatures on photosynthesis in alpine evergreen broadleaf tree species are unclear. We measured the diurnal photosynthetic parameters before and after cold snap for leaves of Quercus guyavifolia growing in its native habitat at 3290 m. On 11 and 12 December 2013 (before cold snap, stomatal and mesophyll conductances (gs and gm, CO2 assimilation rate (An, and total electron flow through PSII (JPSII at daytime were maintained at high levels. The major action of alternative electron flow was to provide extra ATP for primary metabolisms. On 20 December 2013 (after cold snap, the diurnal values of gs, gm, An and JPSII at daytime largely decreased, mainly due to the large decrease in night air temperature. Meanwhile, the ratio of photorespiration and alternative electron flow to JPSII largely increased on 20 December. Furthermore, the high levels of alternative electron flow were accompanied with low rates of extra ATP production. A quantitative limitation analysis reveals that the gm limitation increased on 20 December with decreased night air temperature. Therefore, the night air temperature was an important determinant of stomatal/mesophyll conductance and photosynthesis. When photosynthesis is inhibited following freezing night temperatures, photorespiration and alternative electron flow are important electron sinks, which support the role of photorespiration and alternative electron flow in photoportection for alpine plants under low temperatures.

Combined community ecology and floristics, a synthetic study on the upper montane evergreen broad-leaved forests in Yunnan, southwestern China

Institute of Scientific and Technical Information of China (English)

Hua Zhu; Yong Chai; Shisun Zhou; Lichun Yan; Jipu Shi; Guoping Yang

2016-01-01

The upper montane evergreen broad-leaved forest in Yunnan occurs mainly in the zone of persistent cloud and has a discontinuous, island-like, distribution. It is diverse, rich in endemic species, and likely to be sensitive to climate change. Six 1-ha sampling plots were established across the main distribution area of the upper montane evergreen broad-leaved forest in Yunnan. All trees with d.b.h.>1 cm in each plot were identified. Patterns of seed plant distributions were quantified at the specific, generic and family levels. The forests are dominated by the families Fagaceae, Lauraceae, Theaceae and Magnoliaceae, but are very diverse with only a few species shared between sites. Floristic similarities at the family and generic level were high, but they were low at the specific level, with species complementarity between plots. Diversity varied greatly among sites, with greater species richness and more rare species in western Yunnan than central Yunnan. The flora is dominated by tropical biogeographical elements, mainly the pantropic and the tropical Asian distributions at the family and genus levels. In contrast, at the species level, the flora is dominated by the southwest or the southeast China distributions, including Yunnan endemics. This suggests that the flora of the upper montane forest in Yunnan could have a tropical floristic origin, and has adapted to cooler temperatures with the uplift of the Himalayas. Due to great sensitivity to climate, high endemism and species complementarity, as well as the discontinuous, island-like, distribution patterns of the upper montane forest in Yunnan, the regional conservation of the forest is especially needed.

Expansion of deciduous tall shrubs but not evergreen dwarf shrubs inhibited by reindeer in Scandes mountain range.

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Vowles, Tage; Gunnarsson, Bengt; Molau, Ulf; Hickler, Thomas; Klemedtsson, Leif; Björk, Robert G

2017-11-01

One of the most palpable effects of warming in Arctic ecosystems is shrub expansion above the tree line. However, previous studies have found that reindeer can influence plant community responses to warming and inhibit shrubification of the tundra.We revisited grazed (ambient) and ungrazed study plots (exclosures), at the southern as well as the northern limits of the Swedish alpine region, to study long-term grazing effects and vegetation changes in response to increasing temperatures between 1995 and 2011, in two vegetation types (shrub heath and mountain birch forest).In the field layer at the shrub heath sites, evergreen dwarf shrubs had increased in cover from 26% to 49% but were unaffected by grazing. Deciduous dwarf and tall shrubs also showed significant, though smaller, increases over time. At the birch forest sites, the increase was similar for evergreen dwarf shrubs (20-48%) but deciduous tall shrubs did not show the same consistent increase over time as in the shrub heath.The cover and height of the shrub layer were significantly greater in exclosures at the shrub heath sites, but no significant treatment effects were found on species richness or diversity.July soil temperatures and growing season thawing degree days (TDD) were higher in exclosures at all but one site, and there was a significant negative correlation between mean shrub layer height and soil TDD at the shrub heath sites. Synthesis . This study shows that shrub expansion is occurring rapidly in the Scandes mountain range, both above and below the tree line. Tall, deciduous shrubs had benefitted significantly from grazing exclosure, both in terms of cover and height, which in turn lowered summer soil temperatures. However, the overriding vegetation shift across our sites was the striking increase in evergreen dwarf shrubs, which were not influenced by grazing. As the effects of an increase in evergreen dwarf shrubs and more recalcitrant plant litter may to some degree counteract some of

Contrasting ozone sensitivity in related evergreen and deciduous shrubs

International Nuclear Information System (INIS)

Calatayud, Vicent; Marco, Francisco; Cervero, Julia; Sanchez-Pena, Gerardo; Sanz, Maria Jose

2010-01-01

Plant responses to enhanced ozone levels have been studied in two pairs of evergreen-deciduous species (Pistacia terebinthus vs. P. lentiscus; Viburnum lantana vs. V. tinus) in Open Top Chambers. Ozone induced widespread visible injury, significantly reduced CO 2 assimilation and stomatal conductance (g s ), impaired Rubisco efficiency and regeneration capacity (V c,max, J max ) and altered fluorescence parameters only in the deciduous species. Differences in stomatal conductance could not explain the observed differences in sensitivity. In control plants, deciduous species showed higher superoxide dismutase (SOD) activity than their evergreen counterparts, suggesting metabolic differences that could make them more prone to redox imbalances. Ozone induced increases in SOD and/or peroxidase activities in all the species, but only evergreens were able to cope with the oxidative stress. The relevancy of these results for the effective ozone flux approach and for the current ozone Critical Levels is also discussed. - Mediterranean evergreen shrubs have a constitutively higher capacity to tolerate ozone stress than their deciduous relatives.

Modeling the early-phase redistribution of radiocesium fallouts in an evergreen coniferous forest after Chernobyl and Fukushima accidents

Energy Technology Data Exchange (ETDEWEB)

Calmon, P.; Gonze, M.-A.; Mourlon, Ch.

2015-10-01

Following the Chernobyl accident, the scientific community gained numerous data on the transfer of radiocesium in European forest ecosystems, including information regarding the short-term redistribution of atmospheric fallout onto forest canopies. In the course of international programs, the French Institute for Radiological Protection and Nuclear Safety (IRSN) developed a forest model, named TREE4 (Transfer of Radionuclides and External Exposure in FORest systems), 15 years ago. Recently published papers on a Japanese evergreen coniferous forest contaminated by Fukushima radiocesium fallout provide interesting and quantitative data on radioactive mass fluxes measured within the forest in the months following the accident. The present study determined whether the approach adopted in the TREE4 model provides satisfactory results for Japanese forests or whether it requires adjustments. This study focused on the interception of airborne radiocesium by forest canopy, and the subsequent transfer to the forest floor through processes such as litterfall, throughfall, and stemflow, in the months following the accident. We demonstrated that TREE4 quite satisfactorily predicted the interception fraction (20%) and the canopy-to-soil transfer (70% of the total deposit in 5 months) in the Tochigi forest. This dynamics was similar to that observed in the Höglwald spruce forest. However, the unexpectedly high contribution of litterfall (31% in 5 months) in the Tochigi forest could not be reproduced in our simulations (2.5%). Possible reasons for this discrepancy are discussed; and sensitivity of the results to uncertainty in deposition conditions was analyzed. - Highlights: • Transfer of radiocesium atmospheric fallout in evergreen forests was modeled. • The model was tested using observations from Chernobyl and Fukushima accidents. • Model predictions of canopy interception and depuration agree with measurements. • Unexpectedly high contribution of litterfall for the

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient.

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Orihuela, Rodrigo L L; Peres, Carlos A; Mendes, Gabriel; Jarenkow, João A; Tabarelli, Marcelo

2015-01-01

We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient.

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Rodrigo L L Orihuela

Full Text Available We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

Investigating the role of evergreen and deciduous forests in the increasing trend in atmospheric CO2 seasonal amplitude

Science.gov (United States)

Welp, L.; Calle, L.; Graven, H. D.; Poulter, B.

2017-12-01

The seasonal amplitude of Northern Hemisphere atmospheric CO2 concentrations has systematically increased over the last several decades, indicating that the timing and amplitude of net CO2 uptake and release by northern terrestrial ecosystems has changed substantially. Remote sensing, dynamic vegetation modeling, and in-situ studies have explored how changes in phenology, expansion of woody vegetation, and changes in species composition and disturbance regimes, among others, are driven by changes in climate and CO2. Despite these efforts, ecosystem models have not been able to reproduce observed atmospheric CO2 changes. Furthermore, the implications for the source/sink balance of northern ecosystems remains unclear. Changing proportions of evergreen and deciduous tree cover in response to climate change could be one of the key mechanisms that have given rise to amplified atmospheric CO2 seasonality. These two different plant functional types (PFTs) have different carbon uptake seasonal patterns and also different sensitivities to climate change, but are often lumped together as one forest type in global ecosystem models. We will demonstrate the potential that shifting distributions of evergreen and deciduous forests can have on the amplitude of atmospheric CO2. We will show phase differences in the net CO2 seasonal uptake using CO2 flux data from paired evergreen/deciduous eddy covariance towers. We will use simulations of evergreen and deciduous PFTs from the LPJ dynamic vegetation model to explore how climate change may influence the abundance and CO2 fluxes of each. Model results show that the area of deciduous forests is predicted to have increased, and the seasonal amplitude of CO2 fluxes has increased as well. The impact of surface flux seasonal variability on atmospheric CO2 amplitude is examined by transporting fluxes from each forest PFT through the TM3 transport model. The timing of the most intense CO2 uptake leads to an enhanced effect of deciduous

Contrasting ozone sensitivity in related evergreen and deciduous shrubs

Energy Technology Data Exchange (ETDEWEB)

Calatayud, Vicent, E-mail: vicent@ceam.e [Fundacion CEAM, c/ Charles R. Darwin 14, Parque Tecnologico, 46980 Paterna, Valencia (Spain); Marco, Francisco; Cervero, Julia [Fundacion CEAM, c/ Charles R. Darwin 14, Parque Tecnologico, 46980 Paterna, Valencia (Spain); Sanchez-Pena, Gerardo [SPCAN, Dir. Gral. de Medio Natural y Politica Forestal, Ministerio de Medio Ambiente, y Medio Rural y Marino, Rios Rosas 24, 28003 Madrid (Spain); Sanz, Maria Jose [Fundacion CEAM, c/ Charles R. Darwin 14, Parque Tecnologico, 46980 Paterna, Valencia (Spain)

2010-12-15

Plant responses to enhanced ozone levels have been studied in two pairs of evergreen-deciduous species (Pistacia terebinthus vs. P. lentiscus; Viburnum lantana vs. V. tinus) in Open Top Chambers. Ozone induced widespread visible injury, significantly reduced CO{sub 2} assimilation and stomatal conductance (g{sub s}), impaired Rubisco efficiency and regeneration capacity (V{sub c,max,}J{sub max}) and altered fluorescence parameters only in the deciduous species. Differences in stomatal conductance could not explain the observed differences in sensitivity. In control plants, deciduous species showed higher superoxide dismutase (SOD) activity than their evergreen counterparts, suggesting metabolic differences that could make them more prone to redox imbalances. Ozone induced increases in SOD and/or peroxidase activities in all the species, but only evergreens were able to cope with the oxidative stress. The relevancy of these results for the effective ozone flux approach and for the current ozone Critical Levels is also discussed. - Mediterranean evergreen shrubs have a constitutively higher capacity to tolerate ozone stress than their deciduous relatives.

Neoendemism in Madagascan scaly tree ferns results from recent, coincident diversification bursts.

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Janssen, Thomas; Bystriakova, Nadia; Rakotondrainibe, France; Coomes, David; Labat, Jean-Noël; Schneider, Harald

2008-08-01

More than 80% of Madagascar's 12,000 plant species are endemic with the degree of endemism reaching as much as 95% in the scaly tree ferns, an important species rich component of Madagascar's evergreen rainforests. Predominantly African or Asian ancestry and divergence times usually postdating the separation of Madagascar from the Gondwanan landmasses have been demonstrated for several Madagascan animal and angiosperm groups. However, evolutionary studies of rainforest-specific lineages are scarce and the ecological context of radiation events has rarely been investigated. Here, we examine the evolution of Madagascan tree ferns as a rainforest-specific model family, integrate results from bioclimatic niche analysis with a dated phylogenetic framework, and propose an evolutionary scenario casting new light on our knowledge of the evolution of large island endemic clades. We show that Madagascar's extant tree fern diversity springs from three distinct ancestors independently colonizing Madagascar in the Miocene and that these three monophyletic clades diversified in three coincident radiation bursts during the Pliocene, reaching exceptionally high diversification rates and most likely responding to a common climatic trigger. Recent diversification bursts may thus have played a major role in the evolution of the extant Madagascan rainforest biome, which hence contains a significant number of young, neoendemic taxa.

Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

International Nuclear Information System (INIS)

Calder, W.J.; Lifferth, G.; Clair, S.B.S.; Moritz, M.A.

2010-01-01

Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly un investigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

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W. John Calder

2010-01-01

Full Text Available Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly uninvestigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

Comprehensive national database of tree effects on air quality and human health in the United States

Science.gov (United States)

Satoshi Hirabayashi; David J. Nowak

2016-01-01

Trees remove air pollutants through dry deposition processes depending upon forest structure, meteorology, and air quality that vary across space and time. Employing nationally available forest, weather, air pollution and human population data for 2010, computer simulations were performed for deciduous and evergreen trees with varying leaf area index for rural and...

Spatial pattern of tree diversity and evenness across forest types in Majella National Park, Italy

Directory of Open Access Journals (Sweden)

Mohammad Redowan

2015-09-01

Full Text Available Background Estimation of tree diversity at broader scale is important for conservation planning. Tree diversity should be measured and understood in terms of diversity and evenness, two integral components to describe the structure of a biological community. Variation of the tree diversity and evenness with elevation, topographic relief, aspect, terrain shape, slope, soil nutrient, solar radiation etc. are well documented. Methods Present study explores the variation of tree diversity (measured as Shannon diversity and evenness indices of Majella National Park, Italy with five available forest types namely evergreen oak woods, deciduous oak woods, black/aleppo pine stands, hop-hornbeam forest and beech forest, using satellite, environmental and field data. Results Hop-hornbeam forest was found to be most diverse and even while evergreen Oak woods was the lowest diverse and even. Diversity and evenness of forest types were concurrent to each other i.e. forest type which was more diverse was also more even. As a broad pattern, majority portion of the study area belonged to medium diversity and high evenness class. Conclusions Satellite images and other GIS data proved useful tools in monitoring variation of tree diversity and evenness across various forest types. Present study findings may have implications in prioritizing conservation zones of high tree diversity at Majella.

First megafossil evidence of Cyatheaceous tree fern from the Indian

Indian Academy of Sciences (India)

A part of the compressed tree fern axis with leaf and adventitious root scars in unusual arrangement from Plio–Pleistocene sediments of Arunachal Pradesh, India is described as Cyathea siwalika sp. nov. This record suggests that Cyathea was an important component of tropical evergreen forest in the area during the ...

Relating ring width of Mediterranean evergreen species to seasonal and annual variations of precipitation and temperature

Science.gov (United States)

Nijland, W.; Jansma, E.; Addink, E. A.; Domínguez Delmás, M.; de Jong, S. M.

2011-05-01

Plant growth in Mediterranean landscapes is limited by the typical summer-dry climate. Forests in these areas are only marginally productive and may be quite susceptible to modern climate change. To improve our understanding of forest sensitivity to annual and seasonal climatic variability, we use tree-ring measurements of two Mediterranean evergreen tree species: Quercus ilex L. and Arbutus unedo L. We sampled 34 stems of these species on three different types of substrates in the Peyne study area in southern France. The resulting chronologies were analysed in combination with 38 yr of monthly precipitation and temperature data to reconstruct the response of stem growth to climatic variability. Results indicate a strong positive response to May and June precipitation, as well as a significant positive influence of early-spring temperatures and a negative growth response to summer heat. Comparison of the data with more detailed productivity measurements in two contrasting years confirms these observations and shows a strong productivity limiting effect of low early-summer precipitation. The results show that tree-ring data from Q.ilex and A.unedo can provide valuable information about the response of these tree species to climate variability, improving our ability to predict the effects of climate change in Mediterranean ecosystems.

Oleaceae

NARCIS (Netherlands)

Stoffers, A.L.

1982-01-01

Evergreen or deciduous trees or shrubs or sometimes woody vines. Leaves opposite, verticillate or very rarely alternate, simple or pinnately compound. Stipules wanting. Inflorescence consisting of mostly terminal dichasial panicles or cymes. Bracts and braoteoles present. Flowers hermaphrodite or

\\. Santalum album L. (sandalwood) is a small evergreen tree that ...

Indian Academy of Sciences (India)

once in late summer and again between October and December, are small and purplish brown. Sandal trees show considerable variation with respect to the shape, size of their leaf and fruit and the extent of heartwood. The heartwood and the essential oil obtained from it are among the oldest known perfumery material and ...

Water-use strategies in two co-occurring Mediterranean evergreen oaks: surviving the summer drought.

Science.gov (United States)

David, T S; Henriques, M O; Kurz-Besson, C; Nunes, J; Valente, F; Vaz, M; Pereira, J S; Siegwolf, R; Chaves, M M; Gazarini, L C; David, J S

2007-06-01

In the Mediterranean evergreen oak woodlands of southern Portugal, the main tree species are Quercus ilex ssp. rotundifolia Lam. (holm oak) and Quercus suber L. (cork oak). We studied a savannah-type woodland where these species coexist, with the aim of better understanding the mechanisms of tree adaptation to seasonal drought. In both species, seasonal variations in transpiration and predawn leaf water potential showed a maximum in spring followed by a decline through the rainless summer and a recovery with autumn rainfall. Although the observed decrease in predawn leaf water potential in summer indicates soil water depletion, trees maintained transpiration rates above 0.7 mm day(-1) during the summer drought. By that time, more than 70% of the transpired water was being taken from groundwater sources. The daily fluctuations in soil water content suggest that some root uptake of groundwater was mediated through the upper soil layers by hydraulic lift. During the dry season, Q. ilex maintained higher predawn leaf water potentials, canopy conductances and transpiration rates than Q. suber. The higher water status of Q. ilex was likely associated with their deeper root systems compared with Q. suber. Whole-tree hydraulic conductance and minimum midday leaf water potential were lower in Q. ilex, indicating that Q. ilex was more tolerant to drought than Q. suber. Overall, Q. ilex seemed to have more effective drought avoidance and drought tolerance mechanisms than Q. suber.

Alsophila weidenbrueckii (Cyatheaceae), a new scaly tree fern from Papua New Guinea

NARCIS (Netherlands)

Lehnert, M.

2016-01-01

The scaly tree fern Alsophila weidenbrueckii is described and illustrated as new to science. It occurs in the Bismarck range in north-eastern New Guinea at 1200–2100 m in evergreen wet mountain forest. The species reaches maturity at a comparatively old age and large size and regenerates only in

A remotely sensed pigment index reveals photosynthetic phenology in evergreen conifers

OpenAIRE

Gamon, John A.

2016-01-01

In evergreen conifers, where the foliage amount changes little with season, accurate detection of the underlying “photosynthetic phenology” from satellite remote sensing has been difficult, presenting challenges for global models of ecosystem carbon uptake. Here, we report a close correspondence between seasonally changing foliar pigment levels, expressed as chlorophyll/carotenoid ratios, and evergreen photosynthetic activity, leading to a “chlorophyll/carotenoid index” (CCI) that tracks ever...

Phosphorus conservation by evergreenness of mountain laurel. [Kalmia latifolia

Energy Technology Data Exchange (ETDEWEB)

Thomas, W A [Oak Ridge National Lab., TN; Grigal, D F

1976-01-01

Field studies and compartmental model analyses demonstrate that the evergreen nature of mountain laurel Kalmia latifolia L. helps conserve phosphorus on infertile sites. The perennial canopy continuously adds P to the forest floor through foliar leaching and year-round leaf fall. Slow mineralization of leaf litter provides a steady addition of available P. The evergreenness of Kalmia allows it to utilize increases in available P, thus keeping it in circulation through biological tissues. Retention of a sufficient P supply in this manner allows the site to respond when changes such as disturbance or succession occur in the system.

78 FR 45288 - Frank Sherman, Evergreen Trails, Inc., Cabana Coaches, LLC, TMS West Coast, Inc. and FSCS...

Science.gov (United States)

2013-07-26

... DEPARTMENT OF TRANSPORTATION Surface Transportation Board [STB Docket No. MCF 21054] Frank Sherman, Evergreen Trails, Inc., Cabana Coaches, LLC, TMS West Coast, Inc. and FSCS Corporation--Intra-Corporate Family Transaction Exemption Frank Sherman, Evergreen Trails, Inc. (Evergreen), Cabana Coaches, LLC...

Relating ring width of Mediterranean evergreen species to seasonal and annual variations of precipitation and temperature

Directory of Open Access Journals (Sweden)

W. Nijland

2011-05-01

Full Text Available Plant growth in Mediterranean landscapes is limited by the typical summer-dry climate. Forests in these areas are only marginally productive and may be quite susceptible to modern climate change. To improve our understanding of forest sensitivity to annual and seasonal climatic variability, we use tree-ring measurements of two Mediterranean evergreen tree species: Quercus ilex L. and Arbutus unedo L. We sampled 34 stems of these species on three different types of substrates in the Peyne study area in southern France. The resulting chronologies were analysed in combination with 38 yr of monthly precipitation and temperature data to reconstruct the response of stem growth to climatic variability. Results indicate a strong positive response to May and June precipitation, as well as a significant positive influence of early-spring temperatures and a negative growth response to summer heat. Comparison of the data with more detailed productivity measurements in two contrasting years confirms these observations and shows a strong productivity limiting effect of low early-summer precipitation. The results show that tree-ring data from Q.ilex and A.unedo can provide valuable information about the response of these tree species to climate variability, improving our ability to predict the effects of climate change in Mediterranean ecosystems.

An observational study of the carbon-sink strength of East Asian subtropical evergreen forests

International Nuclear Information System (INIS)

Tan Zhenghong; Zhang Yiping; Zhang Yongjiang; Song Qinhai; Cao Kunfang; Schaefer, D A; Liu Yuhong; Liang Naishen; Hsia, Yue-Joe; Zhou Guoyi; Li Yuelin; Yan Junhua; Juang, Jehn-Yih; Chu Housen; Yu Guirui; Sun Xiaomin

2012-01-01

Relatively little is known about the effects of regional warming on the carbon cycle of subtropical evergreen forest ecosystems, which are characterized by year-round growing season and cold winters. We investigated the carbon balance in three typical East Asia subtropical evergreen forests, using eddy flux, soil respiration and leaf-level measurements. Subtropical evergreen forests maintain continuous, high rates of photosynthetic activity, even during winter cold periods. Warm summers enhance photosynthetic rates in a limited way, because overall ecosystem productivity is primarily restrained by radiation levels during the warm period. Conversely, warm climates significantly enhance the respiratory carbon efflux. The finding of lower sensitivity of photosynthesis relative to that of respiration suggests that increased temperature will weaken the carbon-sink strength of East Asia subtropical evergreen forests. (letter)

Composition and diversity of tree species in transects of location lowland evergreen forest of Ecuador

Directory of Open Access Journals (Sweden)

Jorge Caranqui A.

2015-09-01

Full Text Available The study was conducted in 9 transects 1000m2 of lowland evergreen forest, located in two locations on the coast and one in eastern Ecuador. It was to contribute to knowledge of the diversity and composition of woody plants over 10 cm diameter at breast height (DBH plus infer the state of conservation of forests based on the composition, the number of species, indices diversity and importance value (IV, found in 9 transects of 1000 m² of forest: 156 species, 107 genera and 39 families distributed in 9 transects, in each one the Simpson diversity index is of 0.92 to 0.95, in this case are diversity because all approaches 1. Most were found species aren´t present in all transects, the index value in each transect does not exceed 40%. Grouping transects match three locations exception made to transect 5 and 8 were conducted in disturbed sites, the most transects are intermediate disturbance that their high levels of diversity.

The ghosts of trees past: savanna trees create enduring legacies in plant species composition.

Science.gov (United States)

Stahlheber, Karen A; Crispin, Kimberly L; Anton, Cassidy; D'Antonio, Carla M

2015-09-01

Isolated trees in savannas worldwide are known to modify their local environment and interact directly with neighboring plants. Less is known about how related tree species differ in their impacts on surrounding communities, how the effects of trees vary between years, and how composition might change following loss of the tree. To address these knowledge gaps, we explored the following questions: How do savanna trees influence the surrounding composition of herbaceous plants? Is the influence of trees consistent across different species and years? How does this change following the death of the tree? We surveyed herbaceous species composition and environmental attributes surrounding living and dead evergreen and deciduous Quercus trees in California (USA) savannas across several years that differed in their total precipitation. Oak trees of all species created distinct, homogenous understory communities dominated by exotic grasses across several sites. The composition of the low-diversity understory communities showed less interannual variation than open grassland, despite a two-fold difference in precipitation between the driest and wettest year. Vegetation composition was correlated with variation in soil properties, which were strongly affected by trees. Oaks also influenced the communities beyond the edge of the crown, but this depended on site and oak species. Low-diversity understory communities persisted up to 43 years following the death of the tree. A gradual decline in the effect of trees on the physical, environment following death did not result in vegetation becoming more similar to open grassland over time. The presence of long-lasting legacies of past tree crowns highlights the difficulty of assigning control of the current distribution of herbaceous species in grassland to their contemporary environment.

Increased air temperature during simulated autumn conditions does not increase photosynthetic carbon gain but affects the dissipation of excess energy in seedlings of the evergreen Conifer Jack Pine

OpenAIRE

Busch, F.; Huner, N.; Ensminger, I.

2007-01-01

Temperature and daylength act as environmental signals that determine the length of the growing season in boreal evergreen conifers. Climate change might affect the seasonal development of these trees, as they will experience naturally decreasing daylength during autumn, while at the same time warmer air temperature will maintain photosynthesis and respiration. We characterized the down-regulation of photosynthetic gas exchange and the mechanisms involved in the dissipation of energy in Jack ...

Monitoring phenology of photosynthesis in temperate evergreen and mixed deciduous forests using the normalized difference vegetation index (NDVI) and the photochemical reflectance index (PRI) at leaf and canopy scales

Science.gov (United States)

Wong, C. Y.; Arain, M. A.; Ensminger, I.

2016-12-01

Evergreen conifers in boreal and temperate regions undergo strong seasonal changes in photoperiod and temperatures, which determines their phenology of high photosynthetic activity in the growing season and downregulation during the winter. Monitoring the timing of the transition between summer activity and winter downregulation in evergreens is difficult since this is a largely invisible process, unlike in deciduous trees that have a visible budding and a sequence of leaf unfolding in the spring and leaf abscission in the fall. The light-use efficiency (LUE) model estimates gross primary productivity (GPP) and may be parameterized using remotely sensed vegetation indices. Using spectral reflectance data, we derived the normalized difference vegetation index (NDVI), a measure of leaf "greenness", and the photochemical reflectance index (PRI), a proxy for chlorophyll:carotenoid ratios which is related to photosynthetic activity. To better understand the relationship between these vegetation indices and photosynthetic activity and to contrast this relationship between plant functional types, the phenology of NDVI, PRI and photosynthesis was monitored in an evergreen forest and a mixed deciduous forest at the leaf and canopy scale. Our data indicates that the LUE model can be parameterized by NDVI and PRI to track forest phenology. Differences in the sensitivity of PRI and NDVI will be discussed. These findings have implications to address the phenology of evergreen conifers by using PRI to complement NDVI in the LUE model, potentially improving model productivity estimates in northern hemisphere forests, that are dominated by conifers.

Male Specific Gene Expression in Dioecious Phoenix Dactylifera (Date Palm) Tree at Flowering Stage

International Nuclear Information System (INIS)

Al-Ameri, A. A.; Al-Qurainy, F.; Gaafar, A. R. Z.; Khan, S.; Nadeem, M.

2016-01-01

Date palm is a long-living and evergreen important tree in the semiarid regions. Its fruit is rich in carbohydrate and fibres. Transcriptional profiling was compared among male and female trees of dioecious date palm at flowering stage. Male specific genes are expressed at flowering stage which was studied using the cDNA-SCoT marker. We developed sequence characterized amplified region (SCAR) markers of size 253 bp from male tree based on cDNA-SCoT fingerprinting. Further, developed SCAR marker was validated on the independently collected samples of both types of trees at flowering stage. The unique and specific band (253 bp) was amplified from male samples only whereas it was absent from female samples. (author)

Whole-plant allocation to storage and defense in juveniles of related evergreen and deciduous shrub species.

Science.gov (United States)

Wyka, T P; Karolewski, P; Żytkowiak, R; Chmielarz, P; Oleksyn, J

2016-05-01

In evergreen plants, old leaves may contribute photosynthate to initiation of shoot growth in the spring. They might also function as storage sites for carbohydrates and nitrogen (N). We hence hypothesized that whole-plant allocation of carbohydrates and N to storage in stems and roots may be lower in evergreen than in deciduous species. We selected three species pairs consisting of an evergreen and a related deciduous species: Mahonia aquifolium (Pursh) Nutt. and Berberis vulgaris L. (Berberidaceae), Prunus laurocerasus L. and Prunus serotina Ehrh. (Rosaceae), and Viburnum rhytidophyllum Hemsl. and Viburnum lantana L. (Adoxaceae). Seedlings were grown outdoors in pots and harvested on two dates during the growing season for the determination of biomass, carbohydrate and N allocation ratios. Plant size-adjusted pools of nonstructural carbohydrates in stems and roots were lower in the evergreen species of Berberidaceae and Adoxaceae, and the slope of the carbohydrate pool vs plant biomass relationship was lower in the evergreen species of Rosaceae compared with the respective deciduous species, consistent with the leading hypothesis. Pools of N in stems and roots, however, did not vary with leaf habit. In all species, foliage contained more than half of the plant's nonstructural carbohydrate pool and, in late summer, also more than half of the plant's N pool, suggesting that in juvenile individuals of evergreen species, leaves may be a major storage site. Additionally, we hypothesized that concentration of defensive phenolic compounds in leaves should be higher in evergreen than in deciduous species, because the lower carbohydrate pool in stems and roots of the former restricts their capacity for regrowth following herbivory and also because of the need to protect their longer-living foliage. Our results did not support this hypothesis, suggesting that evergreen plants may rely predominantly on structural defenses. In summary, our study indicates that leaf habit has

Constructing seasonal LAI trajectory by data-model fusion for global evergreen needle-leaf forests

Science.gov (United States)

Wang, R.; Chen, J.; Mo, G.

2010-12-01

For decades, advancements in optical remote sensors made it possible to produce maps of a biophysical parameter--the Leaf Area Index (LAI), which is critically necessary in regional and global modeling of exchanges of carbon, water, energy and other substances, across large areas in a fast way. Quite a few global LAI products have been generated since 2000, e.g. GLOBCARBON (Deng et al., 2006), MODIS Collection 5 (Shabanov et al., 2007), CYCLOPES (Baret et al., 2007), etc. Albeit these progresses, the basic physics behind the technology restrains it from accurate estimation of LAI in winter, especially for northern high-latitude evergreen needle-leaf forests. Underestimation of winter LAI in these regions has been reported in literature (Yang et al., 2000; Cohen et al., 2003; Tian et al., 2004; Weiss et al., 2007; Pisek et al., 2007), and the distortion is usually attributed to the variations of canopy reflectance caused by understory change (Weiss et al., 2007) as well as by the presence of ice and snow on leaves and ground (Cohen, 2003; Tian et al., 2004). Seasonal changes in leaf pigments can also be another reason for low LAI retrieved in winter. Low conifer LAI values in winter retrieved from remote sensing make them unusable for surface energy budget calculations. To avoid these drawbacks of remote sensing approaches, we attempt to reconstruct the seasonal LAI trajectory through model-data fusion. A 1-degree LAI map of global evergreen needle-leaf forests at 10-day interval is produced based on the carbon allocation principle in trees. With net primary productivity (NPP) calculated by the Boreal Ecosystems Productivity Simulator (BEPS) (Chen et al., 1999), carbon allocated to needles is quantitatively evaluated and then can be further transformed into LAI using the specific leaf area (SLA). A leaf-fall scheme is developed to mimic the carbon loss caused by falling needles throughout the year. The seasonally maximum LAI from remote sensing data for each pixel

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Gyrocarpus americanus Jacq. (Helicopter Tree) of Hernandiaceae is a moderate size deciduous tree that grows to about 12 m in height with a smooth, shining, greenish-white bark. The leaves are ovate, rarely irregularly ... flowers which are unpleasant smelling. Fruit is a woody nut with two long thin wings.

Environmental sampling of Ceratonia siliqua (carob) trees in Spain reveals the presence of the rare Cryptococcus gattii genotype AFLP7/VGIV.

Science.gov (United States)

Linares, Carlos; Colom, María Francisca; Torreblanca, Marina; Esteban, Violeta; Romera, Álvaro; Hagen, Ferry

2015-01-01

Cryptococcus gattii is a pathogenic basidiomycetous yeast that is emerging in temperate climate zones worldwide. C. gattii has repetitively been isolated from numerous tree species. Ongoing environmental sampling and molecular characterization is essential to understand the presence of this primary pathogenic microorganism in the Mediterranean environment. To report the first isolation of the rare C. gattii genotype AFLP7/VGIV from the environment in Europe. Samples were collected from woody debris of carob trees (Ceratonia siliqua) and olive trees (Olea europaea) in El Perelló, Tarragona, Spain. Cryptococcus species were further characterized by using URA5-RFLP, MALDI-TOF, AFLP and MLST. The antifungal susceptibility profile to amphotericin B, 5-fluorocytosine, fluconazole, itraconazole, posaconazole and voriconazole was determined using Sensititre Yeast One and E-test. Cultures from one carob tree revealed the presence of ten Cryptococcus-like colonies. One colony was identified as C. gattii, and subsequent molecular characterization showed that it was an α mating-type that belonged to the rare genotype AFLP7/VGIV. Antifungal susceptibility testing showed values within the range of sensitivity described for other isolates of the same genotype and within the epidemiological cutoff values for this species. The isolation of the rare C. gattii genotype AFLP7/VGIV in Spain is the first report in the European environment, implying the possible presence in other regions of the Mediterranean area, and underlines that clinicians must be aware for C. gattii infections in healthy individuals. Copyright © 2014 Revista Iberoamericana de Micología. Published by Elsevier Espana. All rights reserved.

Effect of Disturbance Regimes on Spatial Patterns of Tree Species in Three Sites in a Tropical Evergreen Forest in Vietnam

Directory of Open Access Journals (Sweden)

Do Thi Ngoc Le

2016-01-01

Full Text Available The effects of disturbance regimes on the spatial patterns of the five most abundant species were investigated in three sites in a tropical forest at Xuan Nha Nature Reserve, Vietnam. Three permanent one-ha plots were established in undisturbed forest (UDF, lightly disturbed forest (LDF, and highly disturbed forest (HDF. All trees ≥5 cm DBH were measured in twenty-five 20 m × 20 m subplots. A total of 57 tree species belonging to 26 families were identified in the three forest types. The UDF had the highest basal area (30 m2 ha−1, followed by the LDF (17 m2 ha−1 and the HDF (13.0 m2 ha−1. The UDF also had the highest tree density (751 individuals ha−1 while the HDF held the lowest (478 individuals ha−1. Across all species, there were 417 “juveniles,” 267 “subadults,” and 67 “adults” in the UDF, while 274 “juveniles,” 230 “subadults,” and 36 “adults” were recorded in the LDF. 238 “juveniles,” 227 “subadults,” and 13 “adults” were obtained in the HDF. The univariate and bivariate data with pair- and mark-correlation functions of intra- and interspecific interactions of the five most abundant species changed in the three forest types. Most species indicated clumping or regular distributions at small scale, but a high ratio of negative interspecific small-scale associations was recorded in both the LDF and HDF sites. These were, however, rare in the UDF.

Growing up with stress - carbon sequestration and allocation dynamics of a broadleaf evergreen forest

Science.gov (United States)

Griebel, Anne; Bennett, Lauren T.; Arndt, Stefan K.

2016-04-01

Evergreen forests have the potential to sequester carbon year-round due to the presence of leaves with a multi-year lifespan. Eucalypt forests occur in warmer climates where temperature and radiation are not imposing a strong seasonality. Thus, unlike deciduous or many coniferous trees, many eucalypts grow opportunistically as conditions allow. As such, many eucalypts do not produce distinct growth rings, which present challenges to the implementation of standard methods and data interpretation approaches for monitoring and explaining carbon allocation dynamics in response to climatic stress. As a consequence, there is a lack of detailed understanding of seasonal growth dynamics of evergreen forests as a whole, and, in particular, of the influence of climatic drivers on carbon allocation to the various biomass pools. We used a multi-instrument approach in a mixed species eucalypt forest to investigate the influence of climatic drivers on the seasonal growth dynamics of a predominantly temperate and moisture-regulated environment in south-eastern Australia. Ecosystem scale observations of net ecosystem exchange (NEE) from a flux tower in the Wombat forest near Melbourne indicated that the ecosystem is a year-round carbon sink, but that intra-annual variations in temperature and moisture along with prolonged heat waves and dry spells resulted in a wide range of annual sums over the past three years (NEE ranging from ~4 to 12 t C ha-1 yr-1). Dendrometers were used to monitor stem increments of the three dominant eucalypt species. Stem expansion was generally opportunistic with the greatest increments under warm but moist conditions (often in spring and autumn), and the strongest indicators of stem growth dynamics being radiation, vapour pressure deficit and a combined heat-moisture index. Differences in the seasonality of stem increments between species were largely due to differences in the canopy position of sampled individuals. The greatest stem increments were

Capturing characteristics of beryllium-7 in selected tree species

International Nuclear Information System (INIS)

Narazaki, Yukinori; Karube, Yoshiharu.

1997-01-01

With regard to 7 Be, a natural radioactive nuclide, the botanical capturing characteristics were compared between eight species of those trees which grow in a local district. The mechanism of such botanical capture by their leaves was discussed. The amounts of captured 7 Be were different by tree species. Higher radioactivities were found in the coniferous trees than in the broadleaf trees. The seasonal change of 7 Be radioactivity in leaves was significantly higher in winter and spring and lower in summer. Since airborne or fallout 7 Be particles stay on the upper face of leaves, the deposited amount depended on the surface area per weight of leaves particularly for evergreen trees. Because the 7 Be amount in leaves depended on the fallout capturing ability of leafs superficial skin as well as the cleaning effect of rain and the like, the radioactivity on the surface can change depending on the surface condition of leaves even in the case the levels of 7 Be fallout stayed the same. (author)

Species composition, diversity and stratification in subtropical evergreen broadleaf forests along a latitudinal thermal gradient in the Ryukyu Archipelago, Japan

Directory of Open Access Journals (Sweden)

S.M. Feroz

2015-07-01

Full Text Available A well-developed evergreen broadleaf forest exists in the northern part of Okinawa and in the central part of the Ishigaki Islands in the Ryukyu Archipelago, Japan. All woody plants were identified to species level and their heights and diameters were measured in a 750m2 plot in Okinawa and a 400m2 plot in the Ishigaki Islands. Species overlap, dominance, diversity, multi-strata structure, and spatial distribution were calculated. The floristic composition in Okinawa was found to be different from that in Ishigaki. The species overlap between strata was higher in Okinawa than in Ishigaki. Species diversity and evenness tended to increase from the top down in Okinawa and the reverse in Ishigaki. Mean tree weight of each stratum decreased and tree density increased from top down in both forests. This trend resembled the mean weight–density trajectory of self-thinning plant populations. The degree of stand stratification, species richness and species diversity for trees with DBH ⩾4.5  cm increased along the latitudinal thermal gradient in the Ryukyu Archipelago. Thus, trees in the lower strata of Okinawa and upper strata of Ishigaki are important for sustainable maintenance of higher woody species diversity in the Ryukyu Archipelago.

Consumer preference for seeds and seedlings of rare species impacts tree diversity at multiple scales.

Science.gov (United States)

Young, Hillary S; McCauley, Douglas J; Guevara, Roger; Dirzo, Rodolfo

2013-07-01

Positive density-dependent seed and seedling predation, where herbivores selectively eat seeds or seedlings of common species, is thought to play a major role in creating and maintaining plant community diversity. However, many herbivores and seed predators are known to exhibit preferences for rare foods, which could lead to negative density-dependent predation. In this study, we first demonstrate the occurrence of increased predation of locally rare tree species by a widespread group of insular seed and seedling predators, land crabs. We then build computer simulations based on these empirical data to examine the effects of such predation on diversity patterns. Simulations show that herbivore preferences for locally rare species are likely to drive scale-dependent effects on plant community diversity: at small scales these foraging patterns decrease plant community diversity via the selective consumption of rare plant species, while at the landscape level they should increase diversity, at least for short periods, by promoting clustered local dominance of a variety of species. Finally, we compared observed patterns of plant diversity at the site to those obtained via computer simulations, and found that diversity patterns generated under simulations were highly consistent with observed diversity patterns. We posit that preference for rare species by herbivores may be prevalent in low- or moderate-diversity systems, and that these effects may help explain diversity patterns across different spatial scales in such ecosystems.

Understanding of amount and dynamics of radioactive cesium deposited on trees in Fukushima

Energy Technology Data Exchange (ETDEWEB)

Endo, Izuki; Ohte, Nobuhito; Iseda, Kohei; Tanoi, Keitaro; Hirose, Atsushi; Kobayashi, Natsuko I. [The University of Tokyo, 113-8657, 1-1-1 Yayoi Bunkyo-ku, Tokyo (Japan); Ishii, Nobuyoshi [National Institute of Radiological Sciences, 263-8555, 4-9-1 Anagawa, Inage-ku, Chiba-shi, Chiba (Japan); Ohashi, Mizue [University of Hyogo, 670-0092, 1-1-12 Shinzaike-Honcho, Himeji, Hyogo (Japan)

2014-07-01

The accident of Fukushima Daiichi nuclear power plant after the earthquake and Tsunami in March 11, 2011 caused large amount of radioactive cesium ({sup 134}Cs, {sup 137}Cs) deposition onto the forest in the surrounding areas. River water from the forest area is used for food production and also for drinking water in these regions. In order to predict how radioactive Cs diffuse and discharge from the forest catchments, it is important to understand the amount and dynamics of radioactive Cs deposited on the trees. In this report, we show our preliminary results of {sup 137}Cs deposition in forest. Study was conducted in the forest at the upstream of Kami-Oguni River catchment, northern part of Fukushima Prefecture. Three plots (2 deciduous stands and 1 Japanese cedar (Cryptomeria japonica) plantation) were set in the forest. Quercus serrata and C. japonica, a representative of deciduous and evergreen tree species in this region, were chosen from each plot. Sample trees were logged in October 2012. Stem samples were collected every 2 m from above the ground to tree top and separated into bark, sapwood and heartwood. Litter traps were set in each plot and collected every month. Leaf litter was classified among species. Also, soil samples were collected in the cylinder of 5 cm in diameter and maximum 30 cm in depth from the forest floor every month. {sup 137}Cs concentration of all samples were measured by germanium semiconductor detector or NaI(Tl) scintillation counter. Deposited {sup 137}Cs was attached strongly on the bark of Q. serrata at high concentration (9-18 kBq/kg) but there were no clear relationship with tree height. In C. japonica, {sup 137}Cs concentration was about half times lower than that of Q. serrata at 0-10 m part of the tree. {sup 137}Cs concentration in wood of C. japonica was higher than Q. serrata. {sup 137}Cs concentration of sapwood was as high as that of heartwood in C. japonica, but in Q. serrata, {sup 137}Cs concentration in sapwood was

Evergreen understory dynamics in Coweeta forest, North Carolina

Science.gov (United States)

M.M. Dobbs; Albert J. Parker

2004-01-01

A number of studies have elucidated the distributional patterns of various components of Southern Appalachian forests. The evergreen understory here is composed largely of a dominant ericaceous shrub, Rhododendron maximum L., which is believed to be expanding and inhibiting the development of other species with consequent impacts on overall forest...

Allometric Equations for Aboveground and Belowground Biomass Estimations in an Evergreen Forest in Vietnam.

Science.gov (United States)

Nam, Vu Thanh; van Kuijk, Marijke; Anten, Niels P R

2016-01-01

Allometric regression models are widely used to estimate tropical forest biomass, but balancing model accuracy with efficiency of implementation remains a major challenge. In addition, while numerous models exist for aboveground mass, very few exist for roots. We developed allometric equations for aboveground biomass (AGB) and root biomass (RB) based on 300 (of 45 species) and 40 (of 25 species) sample trees respectively, in an evergreen forest in Vietnam. The biomass estimations from these local models were compared to regional and pan-tropical models. For AGB we also compared local models that distinguish functional types to an aggregated model, to assess the degree of specificity needed in local models. Besides diameter at breast height (DBH) and tree height (H), wood density (WD) was found to be an important parameter in AGB models. Existing pan-tropical models resulted in up to 27% higher estimates of AGB, and overestimated RB by nearly 150%, indicating the greater accuracy of local models at the plot level. Our functional group aggregated local model which combined data for all species, was as accurate in estimating AGB as functional type specific models, indicating that a local aggregated model is the best choice for predicting plot level AGB in tropical forests. Finally our study presents the first allometric biomass models for aboveground and root biomass in forests in Vietnam.

Allometric Equations for Aboveground and Belowground Biomass Estimations in an Evergreen Forest in Vietnam.

Directory of Open Access Journals (Sweden)

Vu Thanh Nam

Full Text Available Allometric regression models are widely used to estimate tropical forest biomass, but balancing model accuracy with efficiency of implementation remains a major challenge. In addition, while numerous models exist for aboveground mass, very few exist for roots. We developed allometric equations for aboveground biomass (AGB and root biomass (RB based on 300 (of 45 species and 40 (of 25 species sample trees respectively, in an evergreen forest in Vietnam. The biomass estimations from these local models were compared to regional and pan-tropical models. For AGB we also compared local models that distinguish functional types to an aggregated model, to assess the degree of specificity needed in local models. Besides diameter at breast height (DBH and tree height (H, wood density (WD was found to be an important parameter in AGB models. Existing pan-tropical models resulted in up to 27% higher estimates of AGB, and overestimated RB by nearly 150%, indicating the greater accuracy of local models at the plot level. Our functional group aggregated local model which combined data for all species, was as accurate in estimating AGB as functional type specific models, indicating that a local aggregated model is the best choice for predicting plot level AGB in tropical forests. Finally our study presents the first allometric biomass models for aboveground and root biomass in forests in Vietnam.

Resource partitioning by evergreen and deciduous species in a tropical dry forest.

Science.gov (United States)

Álvarez-Yépiz, Juan C; Búrquez, Alberto; Martínez-Yrízar, Angelina; Teece, Mark; Yépez, Enrico A; Dovciak, Martin

2017-02-01

Niche differentiation can lead to coexistence of plant species by partitioning limiting resources. Light partitioning promotes niche differentiation in tropical humid forests, but it is unclear how niche partitioning occurs in tropical dry forests where both light and soil resources can be limiting. We studied the adult niche of four dominant evergreen (cycad, palm) and drought-deciduous (legume, oak) species co-occurring along environmental gradients. We analyzed light intensity and soil fertility effects on key functional traits related to plant carbon and water economy, how these traits determine species' functional strategies, and how these strategies relate to relative species abundance and spatial patterns. Light intensity was negatively associated with a key trait linked to plant water economy (leaf δ 13 C, a proxy for long-term water-use efficiency-WUE), while soil fertility was negatively associated with a key trait for plant carbon economy (LNC, leaf nitrogen content). Evergreens were highly sclerophyllous and displayed an efficient water economy but poor carbon economy, in agreement with a conservative resource-use strategy (i.e., high WUE but low LNC, photosynthetic rates and stature). Conversely, deciduous species, with an efficient carbon economy but poor water economy, exhibited an exploitative resource-use strategy (i.e., high LNC, photosynthetic rates and stature, but low WUE). Evergreen and deciduous species segregated spatially, particularly at fine-scales, as expected for species with different resource-use strategies. The efficient water economy of evergreens was related to their higher relative abundance, suggesting a functional advantage against drought-deciduous species in water-limited environments within seasonally dry tropical forests.

75 FR 76727 - Evergreen Wind Power III, LLC; Supplemental Notice that Initial Market-Based Rate Filing Includes...

Science.gov (United States)

2010-12-09

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Docket No. ER11-2201-000] Evergreen Wind Power III, LLC; Supplemental Notice that Initial Market-Based Rate Filing Includes Request for... proceeding of Evergreen Wind Power III, LLC's application for market-based rate authority, with an...

Facilitating the recovery of natural evergreen forests in South Africa via invader plant stands

Directory of Open Access Journals (Sweden)

Coert J. Geldenhuys

2017-11-01

Full Text Available Contrary to general belief, planted and naturalized stands of introduced species facilitate the recovery of natural evergreen forests and their diversity. Forest rehabilitation actions are often performed at great cost: mature forest species are planted, while species with adaptations to recover effectively and quickly after severe disturbance are ignored; or stands are cleared of invasive alien species before native tree species are planted. By contrast, cost-effective commercial plantation forestry systems generally use fast-growing pioneer tree species introduced from other natural forest regions. Such planted tree stands often facilitate the recovery of shade-tolerant native forest species. This paper provides a brief overview of disturbance-recovery processes at landscape level, and how pioneer stands of both native and introduced tree species develop from monocultures to diverse mature forest communities. It uses one example of a study of how natural forest species from small forest patches of 3 ha in total invaded a 90-ha stand of the invasive Black wattle, Acacia mearnsii, over a distance of 3.1 ha at Swellendam near Cape Town, South Africa. The study recorded 329 forest species clusters across the wattle stand: more large clusters closer to and more smaller clusters further away from natural forest patches. The 28 recorded forest species (of potentially 40 species in the surrounding forest patches included 79% tree and 21% shrub species. Colonizing forest species had mostly larger fleshy fruit and softer small seeds, and were dispersed by mostly birds and primate species. Maturing forest trees within developing clusters in the wattle stand became a source for forest regeneration away from the clusters, showing different expansion patterns. Four sets of fenced-unfenced plots in the wattle stand showed the impact of browsing by livestock, antelope, rodents and insects on the successful establishment of regenerating forest species, and the

The relationship between species diversity and genetic structure in the rare Picea chihuahuana tree species community, Mexico.

Science.gov (United States)

Simental-Rodríguez, Sergio Leonel; Quiñones-Pérez, Carmen Zulema; Moya, Daniel; Hernández-Tecles, Enrique; López-Sánchez, Carlos Antonio; Wehenkel, Christian

2014-01-01

Species diversity and genetic diversity, the most basic elements of biodiversity, have long been treated as separate topics, although populations evolve within a community context. Recent studies on community genetics and ecology have suggested that genetic diversity is not completely independent of species diversity. The Mexican Picea chihuahuana Martínez is an endemic species listed as "Endangered" on the Red List. Forty populations of Chihuahua spruce have been identified. This species is often associated with tree species of eight genera in gallery forests. This rare Picea chihuahuana tree community covers an area no more than 300 ha and has been subject of several studies involving different topics such as ecology, genetic structure and climate change. The overall aim of these studies was to obtain a dataset for developing management tools to help decision makers implement preservation and conservation strategies. However, this unique forest tree community may also represent an excellent subject for helping us to understand the interplay between ecological and evolutionary processes in determining community structure and dynamics. The AFLP technique and species composition data were used together to test the hypothesis that species diversity is related to the adaptive genetic structure of some dominant tree species (Picea chihuahuana, Pinus strobiformis, Pseudotsuga menziesii and Populus tremuloides) of the Picea chihuahuana tree community at fourteen locations. The Hill numbers were used as a diversity measure. The results revealed a significant correlation between tree species diversity and genetic structure in Populus tremuloides. Because the relationship between the two levels of diversity was found to be positive for the putative adaptive AFLP detected, genetic and species structures of the tree community were possibly simultaneously adapted to a combination of ecological or environmental factors. The present findings indicate that interactions between

Evergreen oak leaves as natural monitor in environmental pollution

International Nuclear Information System (INIS)

Capannesi, G.; Rosada, A.; Caroli, S.

1988-01-01

Evergreen oak was chosen as a possible biological monitor of environmental pollution. It was shown that there was a direct relationship between the concentration of elements in leaves and the presence of pollution sources, i.e. the density of vehicular traffic. (author) 12 figs.; 3 tabs

A simple algorithm for large-scale mapping of evergreen forests in tropical America, Africa and Asia

Science.gov (United States)

Xiangming Xiao; Chandrashekhar M. Biradar; Christina Czarnecki; Tunrayo Alabi; Michael Keller

2009-01-01

The areal extent and spatial distribution of evergreen forests in the tropical zones are important for the study of climate, carbon cycle and biodiversity. However, frequent cloud cover in the tropical regions makes mapping evergreen forests a challenging task. In this study we developed a simple and novel mapping algorithm that is based on the temporal profile...

Exemplifying whole-plant ozone uptake in adult forest trees of contrasting species and site conditions

International Nuclear Information System (INIS)

Nunn, Angela J.; Wieser, Gerhard; Metzger, Ursula; Loew, Markus; Wipfler, Philip; Haeberle, Karl-Heinz; Matyssek, Rainer

2007-01-01

Whole-tree O 3 uptake was exemplified for Picea abies, Fagus sylvatica and Larix decidua in stands at high and low altitude and contrasting water availability through sap flow measurement in tree trunks, intrinsically accounting for drought and boundary layer effects on O 3 flux. O 3 uptake of evergreen spruce per unit foliage area was enhanced by 100% at high relative to low elevation, whereas deciduous beech and larch showed similar uptake regardless of altitude. The responsiveness of the canopy conductance to water vapor and, as a consequence, O 3 uptake to soil moisture and air humidity did not differ between species. Unifying findings at the whole-tree level will promote cause-effect based O 3 risk assessment and modeling. - Sap flow-based assessment of whole-tree O 3 uptake reflects similar responsiveness of canopy conductance and O 3 uptake across contrasting tree species and site conditions

'Geed-hindi' - Melia azadirachta l. - a most common cultivated tree in Somalia

Energy Technology Data Exchange (ETDEWEB)

Kazmi, S.M.A.

1980-01-01

M. azadirachta (Azadirachta indica), also known as 'meri-meri', a straight-stemmed evergreen exotic which grows to 18 m height, tolerates 250 mm annual rainfall and dry or saline soils. Primary uses are in shelterbelts and as a soil binder; the timber is used for building, fuelwood (at 10 yr old) and charcoal; the fruits (from 5 yr old) yield oil; and the tree has medicinal uses.

'Linkage' pharmaceutical evergreening in Canada and Australia

OpenAIRE

Faunce, Thomas A; Lexchin, Joel

2007-01-01

'Evergreening' is not a formal concept of patent law. It is best understood as a social idea used to refer to the myriad ways in which pharmaceutical patent owners utilise the law and related regulatory processes to extend their high rent-earning intellectual monopoly privileges, particularly over highly profitable (either in total sales volume or price per unit) 'blockbuster' drugs. Thus, while the courts are an instrument frequently used by pharmaceutical brand name manufacturers to prolong...

Investigating tree bark as an air-pollution biomonitor by means of neutron activation analysis

International Nuclear Information System (INIS)

Pacheco, A.M.G.; Figueira, R.

2001-01-01

The olive tree (Olea europaea) is an icon of southern Europe and a widespread evergreen in mainland Portugal. First results of a continuing study on the ability of olive-tree bark to act as an air-pollution biomonitor are presented and discussed here. Other than lower signals and an anticipated systemic control over some elements, there seems to be no a priori reason for ruling out the possibility of using bark in atmospheric trace-element surveys. In fact, nonparametric statistics show that, despite their relative magnitude, the variation patterns of bark and lichen concentrations significantly follow one another all across the study area. (author)

Modeling Ecosystem Services for Park Trees: Sensitivity of i-Tree Eco Simulations to Light Exposure and Tree Species Classification

Directory of Open Access Journals (Sweden)

Rocco Pace

2018-02-01

Full Text Available Ecosystem modeling can help decision making regarding planting of urban trees for climate change mitigation and air pollution reduction. Algorithms and models that link the properties of plant functional types, species groups, or single species to their impact on specific ecosystem services have been developed. However, these models require a considerable effort for initialization that is inherently related to uncertainties originating from the high diversity of plant species in urban areas. We therefore suggest a new automated method to be used with the i-Tree Eco model to derive light competition for individual trees and investigate the importance of this property. Since competition depends also on the species, which is difficult to determine from increasingly used remote sensing methodologies, we also investigate the impact of uncertain tree species classification on the ecosystem services by comparing a species-specific inventory determined by field observation with a genus-specific categorization and a model initialization for the dominant deciduous and evergreen species only. Our results show how the simulation of competition affects the determination of carbon sequestration, leaf area, and related ecosystem services and that the proposed method provides a tool for improving estimations. Misclassifications of tree species can lead to large deviations in estimates of ecosystem impacts, particularly concerning biogenic volatile compound emissions. In our test case, monoterpene emissions almost doubled and isoprene emissions decreased to less than 10% when species were estimated to belong only to either two groups instead of being determined by species or genus. It is discussed that this uncertainty of emission estimates propagates further uncertainty in the estimation of potential ozone formation. Overall, we show the importance of using an individual light competition approach and explicitly parameterizing all ecosystem functions at the

Plutonium in tree rings from France and Japan

International Nuclear Information System (INIS)

Garrec, J.-P.; Suzuki, T.; Mahara, Y.; Santry, D.C.; Miyahara, S.; Sugahara, M.; Zheng, J.; Kudo, A.

1995-01-01

Plutonium, along with other radionuclide concentrations, was measured in evergreen tree rings from two different locations. This was used as an information source for the past two centuries. Tree rings are a product of annual layers and thus chronological information is clearly visible. Three trees were harvested in 1988-1990: a French white fir (137 years old) and a spruce tree (177 years old) from the France-Germany border near Nancy, France and a sugi (78 years old) from Nagasaki, Japan. The highest 239 + 240 Pu concentration of 30.0 mBq/kg of dry wood was obtained from the tree rings from Nagasaki, located at the centre of the local fallout of the Pu A-bomb detonated in 1945. This concentration peak was, however, observed in tree rings of 1965-67. The concentration was only 2.9 mBq/kg for the tree rings of 1944-46. The contribution of the local fallout on the surface soils from the A-bomb was 181 mBq/cm 2 at the harvested area of the tree, while the contribution of global fallout by many weapons testing was 5.9 mBq/cm 2 (or 3.3% total fallout in the region). The reason for the over 20 year time lag of 239 + 240 Pu uptake by the tree rings is unknown because many factors influence the routes of Pu into the tree rings. Also the chemical form of Pu in surface soils may have been changed by the surrounding environment. The highest concentration in the tree rings from France was 9.4 mBq/kg which is about 31% of Nagasaki 239 + 240 Pu concentration. (author)

Life-history traits in an evergreen Mediterranean oak respond differentially to previous experimental environments

Directory of Open Access Journals (Sweden)

J. M. Rey Benayas

2008-06-01

Full Text Available Living organisms respond both to current and previous environments, which can have important consequences on population dynamics. However, there is little experimental evidence based on long-term field studies of the effects of previous environments on the performance of individuals. We tested the hypothesis that trees that establish under different environmental conditions perform differently under similar post-establishment conditions. We used the slow-growing, evergreen Mediterranean oak Quercus ilex subsp. rotundifolia as target species. We analyzed the effects of previous environments, competition effects and tradeoffs among life-history traits (survival, growth, and reproduction. We enhanced seedling establishment for three years by reducing abiotic environmental harshness by means of summer irrigation and artificial shading in 12 experimental plots, while four plots remained as controls. Then these treatments were interrupted for ten years. Seedlings under ameliorated environmental conditions survived and grew faster during early establishment. During the post-management period, previous treatments 1 did not have any effect on survival, 2 experienced a slower above-ground growth, 3 decreased root biomass as indicated from reflectivity of Ground Penetration Radar, 4 increased acorn production mostly through a greater canopy volume and 5 increased acorn production effort. The trees exhibited a combination of effects related to acclimation for coping with abiotic stress and effects of intra-specific competition. In accordance with our hypothesis, tree performance overall depended on previous environmental conditions, and the response was different for different life-history traits. We recommend early management because it increased plot cover, shortened the time to attain sexual maturity and increased the amount of acorn production. Plots such as those assessed in this study may act as sources of propagules in deforested

Atlas of United States Trees, Volume 2: Alaska Trees and Common Shrubs.

Science.gov (United States)

Viereck, Leslie A.; Little, Elbert L., Jr.

This volume is the second in a series of atlases describing the natural distribution or range of native tree species in the United States. The 82 species maps include 32 of trees in Alaska, 6 of shrubs rarely reaching tree size, and 44 more of common shrubs. More than 20 additional maps summarize environmental factors and furnish general…

Eco-physiological adaptation of dominant tree species at two contrasting karst habitats in southwestern China [v1; ref status: indexed, http://f1000r.es/xt

Directory of Open Access Journals (Sweden)

Shouren Zhang

2013-05-01

Full Text Available The purpose of this study was to investigate the eco-physiological adaptation of indigenous woody species to their habitats in karst areas of southwestern China. Two contrasting forest habitats were studied: a degraded habitat in Daxiagu and a well-developed habitat in Tianlongshan, and the eco-physiological characteristics of the trees were measured for three growth seasons. Photosynthetic rate (Pn, stomatal conductance (gs, and transpiration rate (Tr of the tree species in Daxiagu were 2-3 times higher than those in Tianlongshan under ambient conditions. However, this habitat effect was not significant when measurements were taken under controlled conditions. Under controlled conditions, Pn, gs, and Tr of the deciduous species were markedly higher than those for the evergreen species. Habitat had no significant effect on water use efficiency (WUE or photochemical characteristics of PSII. The stomatal sensitivity of woody species in the degraded habitat was much higher than that in the well-developed habitat. Similarly, the leaf total nitrogen (N and phosphorus (P contents expressed on the basis of either dry mass or leaf area were also much higher in Daxiagu than they were in Tianlongshan. The mass-based leaf total N content of deciduous species was much higher than that of evergreen species, while leaf area-based total N and P contents of evergreens were significantly higher than those of deciduous species. The photosynthetic nitrogen- and phosphorus-use efficiencies (PNUE and PPUE of deciduous species were much higher than those of evergreens. Further, the PPUE of the woody species in Tianlongshan was much higher than that  of the woody species in Daxiagu. The results from three growth seasons imply that the tree species were able to adapt well to their growth habitats. Furthermore, it seems that so-called “temporary drought stress” may not occur, or may not be severe for most woody plants in karst areas of southwestern China.

Fragmentation patterns of evergreen oak woodlands in Southwestern Iberia

DEFF Research Database (Denmark)

Costa, A.; Madeira, M.; Lima Santos, J.

2014-01-01

Mediterranean evergreen oak woodlands (composed of Quercus suber L. and Quercus rotundifolia Lam.) are becoming increasingly fragmented in the human-modified landscapes of Southwestern Portugal and Spain. Previous studies have largely neglected to assess the spatial changes of oak woodlands...... patterns of oak recruitment and therefore, its study may be helpful in highlighting future baselines for the sustainable management of oak woodlands....

Effect of feeding some evergreen tropical browse plant leaves on ...

African Journals Online (AJOL)

A feeding trial was conducted with thirty (30) weaner rabbits to investigate the nutritive potentials of some evergreen tropical browse plant leaves (Ficcus thoningii, Vitex doniana, Daniela oliveri, Sarcocephalus latifolia). Mixed breed rabbits were used and randomly assigned to five (5) treatments (T1 - T5). The rabbits in ...

Eco-physiological adaptation of dominant tree species at two contrasting karst habitats in southwestern China [v2; ref status: indexed, http://f1000r.es/2d9

Directory of Open Access Journals (Sweden)

Shouren Zhang

2013-11-01

Full Text Available The purpose of this study was to investigate the eco-physiological adaptation of indigenous woody species to their habitats in karst areas of southwestern China. Two contrasting forest habitats were studied: a degraded habitat in Daxiagu and a well-developed habitat in Tianlongshan, and the eco-physiological characteristics of the trees were measured for three growth seasons. Photosynthetic rate (Pn, stomatal conductance (gs, and transpiration rate (Tr of the tree species in Daxiagu were 2-3 times higher than those in Tianlongshan under ambient conditions. However, this habitat effect was not significant when measurements were taken under controlled conditions. Under controlled conditions, Pn, gs, and Tr of the deciduous species were markedly higher than those for the evergreen species. Habitat had no significant effect on water use efficiency (WUE or photochemical characteristics of PSII. The stomatal sensitivity of woody species in the degraded habitat was much higher than that in the well-developed habitat. Similarly, the leaf total nitrogen (N and phosphorus (P contents expressed on the basis of either dry mass or leaf area were also much higher in Daxiagu than they were in Tianlongshan. The mass-based leaf total N content of deciduous species was much higher than that of evergreen species, while leaf area-based total N and P contents of evergreens were significantly higher than those of deciduous species. The photosynthetic nitrogen- and phosphorus-use efficiencies (PNUE and PPUE of deciduous species were much higher than those of evergreens. Further, the PPUE of the woody species in Tianlongshan was much higher than that  of the woody species in Daxiagu. The results from three growth seasons imply that the tree species were able to adapt well to their growth habitats. Furthermore, it seems that so-called “temporary drought stress” may not occur, or may not be severe for most woody plants in karst areas of southwestern China.

Evolutionarily stable strategy of carbon and nitrogen investments in forest leaves and its application in vegetation dynamic modeling

Science.gov (United States)

Weng, E.; Farrior, C.; Dybzinski, R.; Pacala, S. W.

2015-12-01

Leaf mass per area (LMA) and leaf lifespan (LL) are two highly correlated plant traits that are key to plant physiological and ecological properties. Usually, low LMA means short LL, high nitrogen (N) content per unit mass, and fast turnover rates of nutrients; high LMA leads to long LL, low N content, and slow turnover rates. Deciduous trees with low LMA and short lifespan leaves have low carbon cost but high nitrogen demand; and evergreen trees, with high LMA and long lifespan leaves, have high carbon cost but low nitrogen demand. These relationships lead to: 1) evergreen trees have higher leaf area index than deciduous trees; 2) evergreen trees' carbon use efficiency is lower than the deciduous trees' because of their thick leaves and therefore high maintenance respiration; 3) the advantage of evergreens trees brought by their extra leaves over deciduous trees diminishes with increase N in ecosystem. These facts determine who will win when trees compete with each other in a N-limited ecosystem. In this study, we formulate a mathematical model according to the relationships between LMA, LL, leaf nitrogen, and leaf building and maintenance cost, where LMA is the fundamental variable determining the other three. We analyze the evolutionarily stable strategies (ESSs) of LMA with this mathematical model by examining the benefits of carbon and nitrogen investments to leaves in ecosystems with different N. The model shows the ESS converges to low LMA at high N and high LMA at low N. At intermediate N, there are two ESSs at low and high ends of LMA, respectively. The ESS also leads to low forest productivity by outcompeting the possible high productive strategies. We design a simulation scheme in an individual-based competition model (LM3-PPA) to simulate forest dynamics as results of the competition between deciduous and evergreen trees in three different biomes, which are temperate deciduous forest, deciduous-evergreen mixed forest, and boreal evergreen forest. The

Identification of major backscattering sources in trees and shrubs at 10 GHz

Science.gov (United States)

Zoughi, R.; Wu, L. K.; Moore, R. K.

1986-01-01

A short-range very-fine-resolution FM-CW radar scatterometer has been used to identify the primary contributors to 10-GHz radar backscatter from pine, pin oak, American sycamore and sugar maple trees, and from creeping juniper shrubs. This system provided a range resolution of 11 cm and gave a 16-cm diameter illumination area at the target range of about 4 m. For a pine tree, the needles caused the strongest backscatter as well as the strongest attenuation in the radar signal. Cones, although insignificant contributors to the total backscatter, were more important for backscattering than for attenuation. For the rest of the trees, leaves were the strongest cause of backscattering and attenuation. However, in the absence of leaves, the petioles, small twigs, and branches gave relatively strong backscatter. For American sycamore and sugar maple trees, the fruits did not affect the total backscatter unless they were packed in clusters. For creeping juniper the backscattered energy and attenuation in the radar signal were mainly due to the top two layers of the evergreen scales. The contribution of the tree trunks was not determined.

Within-twig leaf distribution patterns differ among plant life-forms in a subtropical Chinese forest.

Science.gov (United States)

Meng, Fengqun; Cao, Rui; Yang, Dongmei; Niklas, Karl J; Sun, Shucun

2013-07-01

In theory, plants can alter the distribution of leaves along the lengths of their twigs (i.e., within-twig leaf distribution patterns) to optimize light interception in the context of the architectures of their leaves, branches and canopies. We hypothesized that (i) among canopy tree species sharing similar light environments, deciduous trees will have more evenly spaced within-twig leaf distribution patterns compared with evergreen trees (because deciduous species tend to higher metabolic demands than evergreen species and hence require more light), and that (ii) shade-adapted evergreen species will have more evenly spaced patterns compared with sun-adapted evergreen ones (because shade-adapted species are generally light-limited). We tested these hypotheses by measuring morphological traits (i.e., internode length, leaf area, lamina mass per area, LMA; and leaf and twig inclination angles to the horizontal) and physiological traits (i.e., light-saturated net photosynthetic rates, Amax; light saturation points, LSP; and light compensation points, LCP), and calculated the 'evenness' of within-twig leaf distribution patterns as the coefficient of variation (CV; the higher the CV, the less evenly spaced leaves) of within-twig internode length for 9 deciduous canopy tree species, 15 evergreen canopy tree species, 8 shade-adapted evergreen shrub species and 12 sun-adapted evergreen shrub species in a subtropical broad-leaved rainforest in eastern China. Coefficient of variation was positively correlated with large LMA and large leaf and twig inclination angles, which collectively specify a typical trait combination adaptive to low light interception, as indicated by both ordinary regression and phylogenetic generalized least squares analyses. These relationships were also valid within the evergreen tree species group (which had the largest sample size). Consistent with our hypothesis, in the canopy layer, deciduous species (which were characterized by high LCP, LSP and

Rare event techniques applied in the Rasmussen study

International Nuclear Information System (INIS)

Vesely, W.E.

1977-01-01

The Rasmussen Study estimated public risks from commercial nuclear power plant accidents, and therefore the statistics of rare events had to be treated. Two types of rare events were specifically handled, those rare events which were probabilistically rare events and those which were statistically rare events. Four techniques were used to estimate probabilities of rare events. These techniques were aggregating data samples, discretizing ''continuous'' events, extrapolating from minor to catastrophic severities, and decomposing events using event trees and fault trees. In aggregating or combining data the goal was to enlarge the data sample so that the rare event was no longer rare, i.e., so that the enlarged data sample contained one or more occurrences of the event of interest. This aggregation gave rise to random variable treatments of failure rates, occurrence frequencies, and other characteristics estimated from data. This random variable treatment can be interpreted as being comparable to an empirical Bayes technique or a Bayesian technique. In the discretizing event technique, events of a detailed nature were grouped together into a grosser event for purposes of analysis as well as for data collection. The treatment of data characteristics as random variables helped to account for the uncertainties arising from this discretizing. In the severity extrapolation technique a severity variable was associated with each event occurrence for the purpose of predicting probabilities of catastrophic occurrences. Tail behaviors of distributions therefore needed to be considered. Finally, event trees and fault trees were used to express accident occurrences and system failures in terms of more basic events for which data existed. Common mode failures and general dependencies therefore needed to be treated. 2 figures

Intra-annual dynamics of non-structural carbohydrates in the cambium of mature conifer trees reflects radial growth demands.

Science.gov (United States)

Simard, Sonia; Giovannelli, Alessio; Treydte, Kerstin; Traversi, Maria Laura; King, Gregory M; Frank, David; Fonti, Patrick

2013-09-01

The presence of soluble carbohydrates in the cambial zone, either from sugars recently produced during photosynthesis or from starch remobilized from storage organs, is necessary for radial tree growth. However, considerable uncertainties on carbohydrate dynamics and the consequences on tree productivity exist. This study aims to better understand the variation in different carbon pools at intra-annual resolution by quantifying how cambial zone sugar and starch concentrations fluctuate over the season and in relation to cambial phenology. A comparison between two physiologically different species growing at the same site, i.e., the evergreen Picea abies Karst. and the deciduous Larix decidua Mill., and between L. decidua from two contrasting elevations, is presented to identify mechanisms of growth limitation. Results indicate that the annual cycle of sugar concentration within the cambial zone is coupled to the process of wood formation. The highest sugar concentration is observed when the number of cells in secondary wall formation and lignification stages is at a maximum, subsequent to most radial growth. Starch disappears in winter, while other freeze-resistant non-structural carbohydrates (NSCs) increase. Slight differences in NSC concentration between species are consistent with the differing climate sensitivity of the evergreen and deciduous species investigated. The general absence of differences between elevations suggests that the cambial activity of trees growing at the treeline was not limited by the availability of carbohydrates at the cambial zone but instead by environmental controls on the growing season duration.

Relationship of Climatic and Forest Factors to Drought- and Heat-Induced Tree Mortality.

Directory of Open Access Journals (Sweden)

Qingyin Zhang

Full Text Available Tree mortality due to warming and drought is a critical aspect of forest ecosystem in responding to climate change. Spatial patterns of tree mortality induced by drought and its influencing factors, however, have yet to be documented at the global scale. We collected observations from 248 sites globally where trees have died due to drought and then assessed the effects of climatic and forest factors on the rate of tree mortality. The global mean annual mortality rate was 5.5%. The rate of tree mortality was significantly and negatively correlated with mean annual precipitation (P 2000 mm and was severe in regions with mean annual precipitation <1000 mm. Mortality rates varied amongst species. The global annual rate of mortality was much higher for gymnosperms (7.1% than angiosperms (4.8% but did not differ significantly between evergreen (6.2% and deciduous (6.1% species. Stand age and wood density affected the mortality rate. Saplings (4.6% had a higher mortality rate than mature trees (3.2%, and mortality rates significantly decreased with increasing wood density for all species (P < 0.01. We therefore concluded that the tree mortality around the globe varied with climatic and forest factors. The differences between tree species, wood density, stand density, and stand age should be considered when evaluating tree mortality at a large spatial scale during future climatic extremes.

Ecological Importance of Small-Diameter Trees to the Structure, Diversity and Biomass of a Tropical Evergreen Forest at Rabi, Gabon.

Science.gov (United States)

Memiaghe, Hervé R; Lutz, James A; Korte, Lisa; Alonso, Alfonso; Kenfack, David

2016-01-01

Tropical forests have long been recognized for their biodiversity and ecosystem services. Despite their importance, tropical forests, and particularly those of central Africa, remain understudied. Until recently, most forest inventories in Central Africa have focused on trees ≥10 cm in diameter, even though several studies have shown that small-diameter tree population may be important to demographic rates and nutrient cycling. To determine the ecological importance of small-diameter trees in central African forests, we used data from a 25-ha permanent plot that we established in the rainforest of Gabon to study the diversity and dynamics of these forests. Within the plot, we censused 175,830 trees ≥1 cm dbh from 54 families, 192 genera, and 345 species. Average tree density was 7,026 trees/ha, basal area 31.64 m2/ha, and above-ground biomass 369.40 Mg/ha. Fabaceae, Ebenaceae and Euphorbiaceae were the most important families by basal area, density and above-ground biomass. Small-diameter trees (1 cm ≥ dbh tree population, 16.5% of basal area, and 4.8% of the above-ground biomass. They also had diversity 18% higher at family level, 34% higher at genus level, and 42% higher at species level than trees ≥10 cm dbh. Although the relative contribution of small-diameter trees to biomass was comparable to other forests globally, their contribution to forest density, and diversity was disproportionately higher. The high levels of diversity within small-diameter classes may give these forests high levels of structural resilience to anthropogenic/natural disturbance and a changing climate.

Nitrogen Nutrition of Fruit Trees to Reconcile Productivity and Environmental Concerns.

Science.gov (United States)

Carranca, Corina; Brunetto, Gustavo; Tagliavini, Massimo

2018-01-10

Although perennial fruit crops represent 1% of global agricultural land, they are of a great economic importance in world trade and in the economy of many regions. The perennial woody nature of fruit trees, their physiological stages of growth, the root distribution pattern, and the presence of herbaceous vegetation in alleys make orchard systems efficient in the use and recycling of nitrogen (N). The present paper intends to review the existing literature on N nutrition of young and mature deciduous and evergreen fruit trees with special emphasis to temperate and Mediterranean climates. There are two major sources of N contributing to vegetative tree growth and reproduction: root N uptake and internal N cycling. Optimisation of the use of external and internal N sources is important for a sustainable fruit production, as N use efficiency by young and mature fruit trees is generally lower than 55% and losses of fertilizer N may occur with the consequent economic and environmental concern. Organic alternatives to mineral N fertilizer like the application of manure, compost, mulching, and cover crops are scarcely used in perennial fruit trees, in spite of the fact that society's expectations call for more sustainable production techniques and the demand for organic fruits is increasing.

Rare event simulation for dynamic fault trees

NARCIS (Netherlands)

Ruijters, Enno Jozef Johannes; Reijsbergen, D.P.; de Boer, Pieter-Tjerk; Stoelinga, Mariëlle Ida Antoinette

2017-01-01

Fault trees (FT) are a popular industrial method for reliability engineering, for which Monte Carlo simulation is an important technique to estimate common dependability metrics, such as the system reliability and availability. A severe drawback of Monte Carlo simulation is that the number of

Rare Event Simulation for Dynamic Fault Trees

NARCIS (Netherlands)

Ruijters, Enno Jozef Johannes; Reijsbergen, D.P.; de Boer, Pieter-Tjerk; Stoelinga, Mariëlle Ida Antoinette; Tonetta, Stefano; Schoitsch, Erwin; Bitsch, Friedemann

2017-01-01

Fault trees (FT) are a popular industrial method for reliability engineering, for which Monte Carlo simulation is an important technique to estimate common dependability metrics, such as the system reliability and availability. A severe drawback of Monte Carlo simulation is that the number of

Explaining the dependence of climatic response of tree radial growth on permafrost

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Bryukhanova, Marina; Benkova, Anna; von Arx, Georg; Fonti, Patrick; Simanko, Valentina; Kirdyanov, Alexander; Shashkin, Alexander

2015-04-01

In northern regions of Siberia it is infrequent to have long-term observations of the variability of soil features, phenological data, duration of the growing season, which can be used to infer the influence of the environment on tree growth and productivity. The best way to understand tree-growth and tree responses to environmental changes is to make use of mechanistic models, allowing to combine already available experiment/field data with other parameters based on biological principles of tree growth. The goal of our study is to estimate which tree species (deciduous, conifer deciduous or conifer evergreen) is more plastic under possible climate changes in permafrost zone. The studied object is located in the northern part of central Siberia, Russia (64°N, 100°E). The study plot was selected within a post-fire succession and representatives for 100 years old even aged mixed forest of Larix gmelinii (Rupr.) Rupr. and Betula pubescens Ehrh. with few exemplars of Spruce (Picea obovata Ledeb.). To understand physiological response of larch, birch and spruce trees to climatic changes the ecological-physiological process-based model of tree photosynthesis (Benkova and Shashkin 2003) was applied. Multiparametric tree-ring chronologies were analyzed and correlated with climatic parameters over the last 77 years. This work is supported by the Ministry of Education and Science of the Russian Federation (Grant from the President of RF for Young Scientists MK-1589.2014.4).

Leaf life span plasticity in tropical seedlings grown under contrasting light regimes

OpenAIRE

Vincent, Grégoire

2006-01-01

Background and Aims The phenotypic plasticity of leaf life span in response to low resource conditions has a potentially large impact on the plant carbon budget, notably in evergreen species not subject to seasonal leaf shedding, but has rarely been well documented. This study evaluates the plasticity of leaf longevity, in terms of its quantitative importance to the plant carbon balance under limiting light. Methods Seedlings of four tropical tree species with contrasting light requirements (...

Seasonal patterns of leaf gas exchange and water relations in dry rain forest trees of contrasting leaf phenology.

Science.gov (United States)

Choat, Brendan; Ball, Marilyn C; Luly, Jon G; Donnelly, Christine F; Holtum, Joseph A M

2006-05-01

Diurnal and seasonal patterns of leaf gas exchange and water relations were examined in tree species of contrasting leaf phenology growing in a seasonally dry tropical rain forest in north-eastern Australia. Two drought-deciduous species, Brachychiton australis (Schott and Endl.) A. Terracc. and Cochlospermum gillivraei Benth., and two evergreen species, Alphitonia excelsa (Fenzal) Benth. and Austromyrtus bidwillii (Benth.) Burret. were studied. The deciduous species had higher specific leaf areas and maximum photosynthetic rates per leaf dry mass in the wet season than the evergreens. During the transition from wet season to dry season, total canopy area was reduced by 70-90% in the deciduous species and stomatal conductance (g(s)) and assimilation rate (A) were markedly lower in the remaining leaves. Deciduous species maintained daytime leaf water potentials (Psi(L)) at close to or above wet season values by a combination of stomatal regulation and reduction in leaf area. Thus, the timing of leaf drop in deciduous species was not associated with large negative values of daytime Psi(L) (greater than -1.6 MPa) or predawn Psi(L) (greater than -1.0 MPa). The deciduous species appeared sensitive to small perturbations in soil and leaf water status that signalled the onset of drought. The evergreen species were less sensitive to the onset of drought and g(s) values were not significantly lower during the transitional period. In the dry season, the evergreen species maintained their canopies despite increasing water-stress; however, unlike Eucalyptus species from northern Australian savannas, A and g(s) were significantly lower than wet season values.

Seasonal changes in camera-based indices from an open canopy black spruce forest in Alaska, and comparison with indices from a closed canopy evergreen coniferous forest in Japan

Science.gov (United States)

Nagai, Shin; Nakai, Taro; Saitoh, Taku M.; Busey, Robert C.; Kobayashi, Hideki; Suzuki, Rikie; Muraoka, Hiroyuki; Kim, Yongwon

2013-06-01

Evaluation of the carbon, water, and energy balances in evergreen coniferous forests requires accurate in situ and satellite data regarding their spatio-temporal dynamics. Daily digital camera images can be used to determine the relationships among phenology, gross primary productivity (GPP), and meteorological parameters, and to ground-truth satellite observations. In this study, we examine the relationship between seasonal variations in camera-based canopy surface indices and eddy-covariance-based GPP derived from field studies in an Alaskan open canopy black spruce forest and in a Japanese closed canopy cedar forest. The ratio of the green digital number to the total digital number, hue, and GPP showed a bell-shaped seasonal profile at both sites. Canopy surface images for the black spruce forest and cedar forest mainly detected seasonal changes in vegetation on the floor of the forest and in the tree canopy, respectively. In contrast, the seasonal cycles of the ratios of the red and blue digital numbers to the total digital numbers differed between the two sites, possibly due to differences in forest structure and leaf color. These results suggest that forest structural characteristics, such as canopy openness and seasonal forest-floor changes, should be considered during continuous observations of phenology in evergreen coniferous forests.

The leaf size-twig size spectrum in evergreen broadleaved forest of ...

African Journals Online (AJOL)

Compared to deciduous broad-leaved species, the evergreen broad-leaved species were smaller in total leaf area for a given cross-sectional area or stem mass. This suggests that the species would support less leaf area at a given twig cross-sectional area with increasing environmental stress. And the life form can modify ...

Orange Is the New Green: Exploring the Restorative Capacity of Seasonal Foliage in Schoolyard Trees

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Eli Paddle

2016-05-01

Full Text Available Urban schoolyard environments are increasingly characterized by a proliferation of hard surfaces with little if any greenery. Schoolyard “greening” initiatives are becoming increasingly popular; however, schoolyard designs often fail to realize their restorative potential. In this quasi-experimental study, a proposed schoolyard greening project was used to visualize alternative planting designs and seasonal tree foliage; these design alternatives were subsequently used as visual stimuli in a survey administered to children who will use the schoolyard to assess the perceived restorative capacity of different design features. The findings indicate that seasonal changes in tree foliage enhance the perceived restorative quality of schoolyard environments. Specifically, fall foliage colour, when compared to green foliage, is rated as being perceived to be equally restorative for children. Additionally, seasonal planting, including evergreen conifers, may enhance the restorative quality of the schoolyard especially when deciduous trees are leafless. Landscape design professionals, community-based organizations, and other decision-makers in schoolyard greening efforts should strategically consider their tree choices to maximize year-round support for healthy attention functioning in children through restoration.

Urban trees reduce nutrient leaching to groundwater.

Science.gov (United States)

Nidzgorski, Daniel A; Hobbie, Sarah E

2016-07-01

Many urban waterways suffer from excess nitrogen (N) and phosphorus (P), feeding algal blooms, which cause lower water clarity and oxygen levels, bad odor and taste, and the loss of desirable species. Nutrient movement from land to water is likely to be influenced by urban vegetation, but there are few empirical studies addressing this. In this study, we examined whether or not urban trees can reduce nutrient leaching to groundwater, an important nutrient export pathway that has received less attention than stormwater. We characterized leaching beneath 33 trees of 14 species, and seven open turfgrass areas, across three city parks in Saint Paul, Minnesota, USA. We installed lysimeters at 60 cm depth to collect soil water approximately biweekly from July 2011 through October 2013, except during winter and drought periods, measured dissolved organic carbon (C), N, and P in soil water, and modeled water fluxes using the BROOK90 hydrologic model. We also measured soil nutrient pools (bulk C and N, KCl-extractable inorganic N, Brays-P), tree tissue nutrient concentrations (C, N, and P of green leaves, leaf litter, and roots), and canopy size parameters (leaf biomass, leaf area index) to explore correlations with nutrient leaching. Trees had similar or lower N leaching than turfgrass in 2012 but higher N leaching in 2013; trees reduced P leaching compared with turfgrass in both 2012 and 2013, with lower leaching under deciduous than evergreen trees. Scaling up our measurements to an urban subwatershed of the Mississippi River (~17 400 ha, containing ~1.5 million trees), we estimated that trees reduced P leaching to groundwater by 533 kg in 2012 (0.031 kg/ha or 3.1 kg/km 2 ) and 1201 kg in 2013 (0.069 kg/ha or 6.9 kg/km 2 ). Removing these same amounts of P using stormwater infrastructure would cost $2.2 million and $5.0 million per year (2012 and 2013 removal amounts, respectively). © 2016 by the Ecological Society of America.

The photochemical reflectance index provides an optical indicator of spring photosynthetic activation in evergreen conifers.

Science.gov (United States)

Wong, Christopher Y S; Gamon, John A

2015-04-01

In evergreens, the seasonal down-regulation and reactivation of photosynthesis is largely invisible and difficult to assess with remote sensing. This invisible phenology may be changing as a result of climate change. To better understand the mechanism and timing of these hidden physiological transitions, we explored several assays and optical indicators of spring photosynthetic activation in conifers exposed to a boreal climate. The photochemical reflectance index (PRI), chlorophyll fluorescence, and leaf pigments for evergreen conifer seedlings were monitored over 1 yr of a boreal climate with the addition of gas exchange during the spring. PRI, electron transport rate, pigment levels, light-use efficiency and photosynthesis all exhibited striking seasonal changes, with varying kinetics and strengths of correlation, which were used to evaluate the mechanisms and timing of spring activation. PRI and pigment pools were closely timed with photosynthetic reactivation measured by gas exchange. The PRI provided a clear optical indicator of spring photosynthetic activation that was detectable at leaf and stand scales in conifers. We propose that PRI might provide a useful metric of effective growing season length amenable to remote sensing and could improve remote-sensing-driven models of carbon uptake in evergreen ecosystems. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Retranslocation of foliar nutrients in evergreen tree species planted in a Mediterranean environment.

Science.gov (United States)

Fife, D N; Nambiar, E K S; Saur, E

2008-02-01

Internal nutrient recycling through retranslocation (resorption) is important for meeting the nutrient demands of new tissue production in trees. We conducted a comparative study of nutrient retranslocation from leaves of five tree species from three genera grown in plantation forests for commercial or environmental purposes in southern Australia--Acacia mearnsii De Wild., Eucalyptus globulus Labill., E. fraxinoides H. Deane & Maiden, E. grandis W. Hill ex Maiden and Pinus radiata D. Don. Significant amounts of nitrogen, phosphorus and potassium were retranslocated during three phases of leaf life. In the first phase, retranslocation occurred from young leaves beginning 6 months after leaf initiation, even when leaves were physiologically most active. In the second phase, retranslocation occurred from mature green leaves during their second year, and in the third phase, retranslocation occurred during senescence before leaf fall. Nutrient retranslocation occurred mainly in response to new shoot production. The pattern of retranslocation was remarkably similar in the leaves of all study species (and in the phyllodes of Casuarina glauca Sieber ex Spreng.), despite their diverse genetics, leaf forms and growth rates. There was no net retranslocation of calcium in any of the species. The amounts of nutrients at the start of each pre-retranslocation phase had a strong positive relationship with the amounts subsequently retranslocated, and all species fitted a common relationship. The percentage reduction in concentration or content (retranslocation efficiency) at a particular growth phase is subject to many variables, even within a species, and is therefore not a meaningful measure of interspecific variation. It is proposed that the pattern of retranslocation and its governing factors are similar among species in the absence of interspecies competition for growth and crown structure which occurs in mixed species stands.

Protected Areas: Mixed Success in Conserving East Africa's Evergreen Forests

OpenAIRE

Pfeifer, Marion; Burgess, Neil D.; Swetnam, Ruth D.; Platts, Philip J.; Willcock, Simon; Marchant, Robert

2012-01-01

In East Africa, human population growth and demands for natural resources cause forest loss contributing to increased carbon emissions and reduced biodiversity. Protected Areas (PAs) are intended to conserve habitats and species. Variability in PA effectiveness and 'leakage' (here defined as displacement of deforestation) may lead to different trends in forest loss within, and adjacent to, existing PAs. Here, we quantify spatial variation in trends of evergreen forest coverage in East Africa ...

Ozone injury to some Japanese woody plant species in summer

Energy Technology Data Exchange (ETDEWEB)

Kadota, M; Ohta, K

1972-01-01

Ozone is an important constituent of photochemical oxidant smog. This paper reveals the semiquantitative responses of various Japanese woody plant species to ozone (0.25 ppm). Plant species examined in this investigation include four coniferous trees, eleven evergreen broad-leaf trees, and twenty-one deciduous broad-leaf trees or shrubs. Generally, plants having thin leaves were susceptible. The plant species with higher activity of photosynthesis appeared to be more susceptible. As a whole, evergreen broad-leaf trees could be said to be more resistant to ozone than deciduous broad-leaf trees.

Tree structural and species diversities in Okwangwo Forest, Cross ...

African Journals Online (AJOL)

Tree species were grouped into abundance classes. A total of 125 tree species belonging to 36 families and 96 genera were recorded in the area with Margaleffs index of species richness of 2.2754. Most (99) of the tree species encountered were threatened/endangered, 23 species were rare with only 3 tree species ...

From leaf longevity to canopy seasonality: a carbon optimality phenology model for tropical evergreen forests

Science.gov (United States)

Xu, X.; Medvigy, D.; Wu, J.; Wright, S. J.; Kitajima, K.; Pacala, S. W.

2016-12-01

Tropical evergreen forests play a key role in the global carbon, water and energy cycles. Despite apparent evergreenness, this biome shows strong seasonality in leaf litter and photosynthesis. Recent studies have suggested that this seasonality is not directly related to environmental variability but is dominated by seasonal changes of leaf development and senescence. Meanwhile, current terrestrial biosphere models (TBMs) can not capture this pattern because leaf life cycle is highly underrepresented. One challenge to model this leaf life cycle is the remarkable diversity in leaf longevity, ranging from several weeks to multiple years. Ecologists have proposed models where leaf longevity is regarded as a strategy to optimize carbon gain. However previous optimality models can not be readily integrated into TBMs because (i) there are still large biases in predicted leaf longevity and (ii) it is never tested whether the carbon optimality model can capture the observed seasonality in leaf demography and canopy photosynthesis. In this study, we develop a new carbon optimality model for leaf demography. The novelty of our approach is two-fold. First, we incorporate a mechanistic photosynthesis model that can better estimate leaf carbon gain. Second, we consider the interspecific variations in leaf senescence rate, which strongly influence the modelled optimal carbon gain. We test our model with a leaf trait database for Panamanian evergreen forests. Then, we apply the model at seasonal scale and compare simulated seasonality of leaf litter and canopy photosynthesis with in-situ observations from several Amazonian forest sites. We find that (i) compared with original optimality model, the regression slope between observed and predicted leaf longevity increases from 0.15 to 1.04 in our new model and (ii) that our new model can capture the observed seasonal variations of leaf demography and canopy photosynthesis. Our results suggest that the phenology in tropical evergreen

[Distribution pattern of rare plants along riparian zone and its implication for conservation in Shennongjia area].

Science.gov (United States)

Jiang, Mingxi; Deng, Hongbing; Cai, Qinghua

2002-11-01

Due to the importance of riparian zone in maintaining and protecting regional biodiversity, more and more ecologists paid their attentions to riparian zone, and had been aware of the important effects of riparian zone in basic study and practical management. In this study, forty sampling belts (10 m x 100 m) parallel to the bank of Xiangxi River at different elevations in Shennongjia area were selected to investigate the riparian vegetation and rare plants. Fourteen species of rare plants were found in riparian zone, accounting for 42.4% of total rare plant species in Shennongjia area. The main distribution range of the fourteen rare plant species was the mixed evergreen and deciduous broadleaved forest at elevation of 1200-1800 m, where species diversity of plant community was the maximum at the moderate elevation. Fourteen rare plant species could be divided into three groups against the elevation, namely low elevation species group, moderate elevation species group, and high elevation group. In the paper, the authors discussed the reasons forming the distribution pattern of rare plant species, and pointed out the important function of riparian zone on rare plant species protection.

Status and trend of tree growth and mortality rate at the CONECOFOR plots, 1997-2004

Directory of Open Access Journals (Sweden)

Gianfranco Fabbio

2013-11-01

Full Text Available The circumference of trees in the CONECOFOR permanent monitoring plots (PMPs were measured by three surveys carried out in 1997, 2000 and 2005. Plots were arranged into forest types according to tree species, management system and stand structure: beech (Fagus sylvatica L. and spruce (Picea abies K. high forests, aged coppice forests and transitory crops (deciduous, evergreen oaks and beech. Diameter distribution, basal area, basal area increment, tree mortality rate and in-growth were calculated per layer (dominant, intermediate, dominated within each PMP, to point out relative contributions and changes. A range in relative annual growth was detected both within and between types over the monitored period, but an obvious reduction of annual increment was found in two/thirds of plots over 2000-04 as compared to 1997-99. Current mortality, mostly allocated into the dominated and intermediate layers, can be explained as “regular” due to overstocking and high inter-tree competition in almost all of the observed case-studies. Opposite patterns were found to occur as for stand growth vs. mortality rate between coppice forests and the other types owing to the different dynamics of tree competition in progress. Drought 2003 is the likely large-scale factor determining the reduced annual growth course over the second period.

Forest tree species discrimination in western Himalaya using EO-1 Hyperion

Science.gov (United States)

George, Rajee; Padalia, Hitendra; Kushwaha, S. P. S.

2014-05-01

The information acquired in the narrow bands of hyperspectral remote sensing data has potential to capture plant species spectral variability, thereby improving forest tree species mapping. This study assessed the utility of spaceborne EO-1 Hyperion data in discrimination and classification of broadleaved evergreen and conifer forest tree species in western Himalaya. The pre-processing of 242 bands of Hyperion data resulted into 160 noise-free and vertical stripe corrected reflectance bands. Of these, 29 bands were selected through step-wise exclusion of bands (Wilk's Lambda). Spectral Angle Mapper (SAM) and Support Vector Machine (SVM) algorithms were applied to the selected bands to assess their effectiveness in classification. SVM was also applied to broadband data (Landsat TM) to compare the variation in classification accuracy. All commonly occurring six gregarious tree species, viz., white oak, brown oak, chir pine, blue pine, cedar and fir in western Himalaya could be effectively discriminated. SVM produced a better species classification (overall accuracy 82.27%, kappa statistic 0.79) than SAM (overall accuracy 74.68%, kappa statistic 0.70). It was noticed that classification accuracy achieved with Hyperion bands was significantly higher than Landsat TM bands (overall accuracy 69.62%, kappa statistic 0.65). Study demonstrated the potential utility of narrow spectral bands of Hyperion data in discriminating tree species in a hilly terrain.

The Next Generation Library Catalog: A Comparative Study of the OPACs of Koha, Evergreen, and Voyager

Directory of Open Access Journals (Sweden)

Sharon Q. Yang

2010-09-01

Full Text Available Open source has been the center of attention in the library world for the past several years. Koha and Evergreen are the two major open-source integrated library systems (ILSs, and they continue to grow in maturity and popularity. The question remains as to how much we have achieved in open-source development toward the next-generation catalog compared to commercial systems. Little has been written in the library literature to answer this question. This paper intends to answer this question by comparing  the next-generation features of the OPACs of two open-source ILSs (Koha and Evergreen and one proprietary ILS (Voyager’s WebVoyage.

Abiotic factors affect the recruitment and biomass of perennial grass and evergreen shrub seedlings in denuded areas of Patagonian Monte rangelands.

Science.gov (United States)

Bosco, Tomás; Bertiller, Mónica Beatriz; Carrera, Analía Lorena

2018-07-15

Assessing the ability of key species to cope with environmental stresses in disturbed areas is an important issue for recovery of degraded arid ecosystem. Our objective was to evaluate the effect of soil moisture, exposure to UV radiation, and presence/absence of litter with different chemistry on soil N, recruitment and biomass of seedlings of perennial grass (Poa ligularis and Nassella tenuis) and evergreen shrub species (Atriplex lampa and Larrea divaricata) in denuded areas. We carried out a microcosm experiment with soil blocks (28 cm depth) sowed with seeds of the target species, subjected to different levels of litter type (perennial grass-evergreen shrub mixture, evergreen shrub mixture, and no litter), UV radiation (near ambient and reduced UV), and soil water (high: 15-25% and low 5-15%). Periodically, during 6 months, we assessed soil-N (total and inorganic) at two depths and species seedling recruitment at microcosms. Additionally, emerged seedlings of each species were transplanted to individual pots containing soil and subjected to the same previous factors during 12 months. Then, all plants were harvested and biomass assessed. Only inorganic soil-N at the upper soil varied among treatments increasing with the presence of evergreen shrub litter, exposure to ambient UV, and high soil water. Inorganic soil-N, promoted by near ambient UV and high soil water, had a positive effect on recruitment of perennial grasses and A. lampa. Both litter types promoted the recruitment of perennial grasses. Evergreen shrub litter and high soil water promoted the recruitment of L. divaricata. Seedling biomass of perennial grasses increased with high soil water and reduced UV. Ambient UV had positive or null effects on biomass of evergreen shrub seedlings. High soil water increased biomass of L. divaricata seedlings. We concluded that soil water appeared as the most limiting factor for seedling recruitment of all species whereas inorganic soil N limited the

Allelochemicals and activities in a replanted Chinese fir (Cunninghamia lanceolata (Lamb.) Hook) tree ecosystem.

Science.gov (United States)

Kong, C H; Chen, L C; Xu, X H; Wang, P; Wang, S L

2008-12-24

Autotoxicity is a major reason for replant problems in managed tree ecosystems. Studies have related phenolics-based allelochemicals to autotoxicity. We selected a 20-year-old replanted Chinese fir [Cunninghamia lancealata (Lamb.) Hook] tree ecosystem to isolate, identify, determine the biological activity of, and quantify soil phytotoxins. Eight common phenolics (coumarin, vanillin, isovanillin, and p-hydroxybenzoic, vanillic, benzoic, cinnamic, and ferulic acids), friedelin, and a novel cyclic dipeptide (6-hydroxy-1,3-dimethyl-8-nonadecyl-[1,4]-diazocane-2,5-diketone) were obtained by using the bioassay-guided isolation technique from toxic soil of the replanted Chinese fir tree ecosystem. Chemical structures were determined by spectroscopic means, including 2D-NMR (COSY, HMQC, HMBC, and NOESY) experiments. High concentrations of soil phenolics and friedelin were observed in the natural evergreen broadleaf forest (CK) rather than in the Chinese fir tree ecosystem. The phenolics and friedelin were not phytotoxic to Chinese fir trees. However, the cyclic dipeptide inhibited Chinese fir growth at soil concentrations determined in the replanted Chinese fir tree ecosystem. There was a significantly higher soil concentration of cyclic dipeptide in the replanted Chinese fir tree ecosystem than in a fresh Chinese fir tree ecosystem. The results suggest that phenolics and friedelin are not key allelochemicals since they are weakly phytotoxic and are detected in low concentrations in the replanted Chinese fir tree ecosystem, while cyclic dipeptide is a highly active allelochemical with a phytotoxic effect that limits offspring growth in the replanted Chinese fir tree ecosystem. The discovery of cyclic dipeptide, as well as a further understanding of its potential action mechanism in the replanted Chinese fir tree ecosystem, may contribute to solving the replant problems in managed tree ecosystems.

Soil to plant transfer of 134Cs for olive and orange trees after four years' experimentation

International Nuclear Information System (INIS)

Skarlou, V.; Nobeli, C.; Anoussis, J.; Haidouti, C.

1998-01-01

The transfer parameters of 134 Cs from soil to tree crops (olive and orange trees) were calculated within a long-term glass-house pot experiment which was started in 1994. The effect of the soil characteristics on 134 Cs uptake was also studied using two soils with different physical and chemical properties. Both evergreen trees exhibited a similar behavior in the two soils, showing that a higher or lower uptake is not crop specific. The capacity of the trees for 134 Cs absorption through the roots seems to be significantly influenced by the soil type. The transfer factors were very low in the calcareous heavy soil and much higher in the acid light soil (up to 10 times for olives and 40 for the edible part of oranges). The difference in the TFs is higher between the two soils than between the two tree species. 134 Cs concentration kept increasing in the orange trees up to the 4th year of growth, while it seems to reach an equilibrium, with no further increase, in the olive trees. Although the behavior of the two tree species is similar, the difference in the final processed product is extreme. A significant amount of 134 Cs was observed in olives grown in the light-acid soil whereas no transfer to the olive oil was detected. On the other hand, the edible part of the oranges showed the highest 134 Cs of nearly all the plant parts

Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree

Directory of Open Access Journals (Sweden)

Nagesh A. Kuravadi

2015-08-01

Full Text Available Neem (Azadirachta indica A. Juss is one of the most versatile tropical evergreen tree species known in India since the Vedic period (1500 BC–600 BC. Neem tree is a rich source of limonoids, having a wide spectrum of activity against insect pests and microbial pathogens. Complex tetranortriterpenoids such as azadirachtin, salanin and nimbin are the major active principles isolated from neem seed. Absolutely nothing is known about the biochemical pathways of these metabolites in neem tree. To identify genes and pathways in neem, we sequenced neem genomes and transcriptomes using next generation sequencing technologies. Assembly of Illumina and 454 sequencing reads resulted in 267 Mb, which accounts for 70% of estimated size of neem genome. We predicted 44,495 genes in the neem genome, of which 32,278 genes were expressed in neem tissues. Neem genome consists about 32.5% (87 Mb of repetitive DNA elements. Neem tree is phylogenetically related to citrus, Citrus sinensis. Comparative analysis anchored 62% (161 Mb of assembled neem genomic contigs onto citrus chromomes. Ultrahigh performance liquid chromatography-mass spectrometry-selected reaction monitoring (UHPLC-MS/SRM method was used to quantify azadirachtin, nimbin, and salanin from neem tissues. Weighted Correlation Network Analysis (WCGNA of expressed genes and metabolites resulted in identification of possible candidate genes involved in azadirachtin biosynthesis pathway. This study provides genomic, transcriptomic and quantity of top three neem metabolites resource, which will accelerate basic research in neem to understand biochemical pathways.

Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree

Science.gov (United States)

Rangiah, Kannan; Mahesh, HB; Rajamani, Anantharamanan; Shirke, Meghana D.; Russiachand, Heikham; Loganathan, Ramya Malarini; Shankara Lingu, Chandana; Siddappa, Shilpa; Ramamurthy, Aishwarya; Sathyanarayana, BN

2015-01-01

Neem (Azadirachta indica A. Juss) is one of the most versatile tropical evergreen tree species known in India since the Vedic period (1500 BC–600 BC). Neem tree is a rich source of limonoids, having a wide spectrum of activity against insect pests and microbial pathogens. Complex tetranortriterpenoids such as azadirachtin, salanin and nimbin are the major active principles isolated from neem seed. Absolutely nothing is known about the biochemical pathways of these metabolites in neem tree. To identify genes and pathways in neem, we sequenced neem genomes and transcriptomes using next generation sequencing technologies. Assembly of Illumina and 454 sequencing reads resulted in 267 Mb, which accounts for 70% of estimated size of neem genome. We predicted 44,495 genes in the neem genome, of which 32,278 genes were expressed in neem tissues. Neem genome consists about 32.5% (87 Mb) of repetitive DNA elements. Neem tree is phylogenetically related to citrus, Citrus sinensis. Comparative analysis anchored 62% (161 Mb) of assembled neem genomic contigs onto citrus chromomes. Ultrahigh performance liquid chromatography-mass spectrometry-selected reaction monitoring (UHPLC-MS/SRM) method was used to quantify azadirachtin, nimbin, and salanin from neem tissues. Weighted Correlation Network Analysis (WCGNA) of expressed genes and metabolites resulted in identification of possible candidate genes involved in azadirachtin biosynthesis pathway. This study provides genomic, transcriptomic and quantity of top three neem metabolites resource, which will accelerate basic research in neem to understand biochemical pathways. PMID:26290780

Dispersal limitation at the expanding range margin of an evergreen tree in urban habitats?

DEFF Research Database (Denmark)

Møller, Linda Agerbo; Skou, Anne-Marie Thonning; Kollmann, Johannes Christian

2012-01-01

Dispersal limitations contribute to shaping plant distribution patterns and thus are significant for biodiversity conservation and urban ecology. In fleshy-fruited plants, for example, any preference of frugivorous birds affects dispersal capacities of certain fruit species. We conducted a removal...... landscapes. The results should be included in urban forestry and planting of potentially invasive ornamental species. © 2011 Elsevier GmbH. All rights reserved....... experiment with fruits of Ilex aquifolium, a species that is currently expanding its range margin in northern Europe in response to climate change. The species is also a popular ornamental tree and naturalization has been observed in many parts of its range. Fruits of native I. aquifolium and of three...

Atmospheric Direct Uptake and Long-term Fate of Radiocesium in Trees after the Fukushima Nuclear Accident

Science.gov (United States)

Mahara, Yasunori; Ohta, Tomoko; Ogawa, Hideki; Kumata, Atsushi

2014-11-01

Large areas of forests were radioactively contaminated by the Fukushima nuclear accident of 2011, and forest decontamination is now an important problem in Japan. However, whether trees absorb radioactive fallout from soil via the roots or directly from the atmosphere through the bark and leaves is unclear. We measured the uptake of radiocesium by trees in forests heavily contaminated by the Fukushima nuclear accident. The radiocesium concentrations in sapwood of two tree species, the deciduous broadleaved konara (Quercus serrata) and the evergreen coniferous sugi (Cryptomeria japonica), were higher than that in heartwood. The concentration profiles showed anomalous directionality in konara and non-directionality in sugi, indicating that most radiocesium in the tree rings was directly absorbed from the atmosphere via bark and leaves rather than via roots. Numerical modelling shows that the maximum 137Cs concentration in the xylem of konara will be achieved 28 years after the accident. Conversely, the values for sugi will monotonously decrease because of the small transfer factor in this species. Overall, xylem 137Cs concentrations will not be affected by root uptake if active root systems occur 10 cm below the soil.

Effect of the degree of anthropization in the structure, at three sites fragmented evergreen piedmont forest

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Hugo Gabriel Sánchez Villacis

2017-08-01

Full Text Available The Ecuadorian Amazon is recognized worldwide for its extraordinary megadiversity and multiplicity of forest goods and services. However, the inadequate practices of extractive use of non-timber forest products, the clearing of extensive areas of forests for the development of oil activity and the unsustainable use of timber as economic sustenance of communities have led to structural and functional changes In ecosystems. The study was carried out in three sites of a degraded evergreen forest of the eastern Amazon (Mera, Shell and Puyo in order to evaluate the effect of the degree of intervention on the forest structure. A floristic inventory was carried out with 60 plots of 25 x 25 m2 and tree species ≥ 2.5 cm d1.30 and species in natural regeneration phase with h <2 m were measured. We found 35 families, 65 genera, 101 species and 2 298 individuals, with Arecaceae, Fabaceae and Moraceae being the most representative botanical families. The degree of anthropization was highly modified where Mera was the best state of conservation. It was evidenced a low floristic diversity with patterns of alteration in the vertical and horizontal structure, distinguished phytosociologically by two strata in the sites of Shell and Puyo and by three in Mera, indicator of structural changes.

Unravelling spatiotemporal tree-ring signals in Mediterranean oaks: a variance-covariance modelling approach of carbon and oxygen isotope ratios.

Science.gov (United States)

Shestakova, Tatiana A; Aguilera, Mònica; Ferrio, Juan Pedro; Gutiérrez, Emilia; Voltas, Jordi

2014-08-01

Identifying how physiological responses are structured across environmental gradients is critical to understanding in what manner ecological factors determine tree performance. Here, we investigated the spatiotemporal patterns of signal strength of carbon isotope discrimination (Δ(13)C) and oxygen isotope composition (δ(18)O) for three deciduous oaks (Quercus faginea (Lam.), Q. humilis Mill. and Q. petraea (Matt.) Liebl.) and one evergreen oak (Q. ilex L.) co-occurring in Mediterranean forests along an aridity gradient. We hypothesized that contrasting strategies in response to drought would lead to differential climate sensitivities between functional groups. Such differential sensitivities could result in a contrasting imprint on stable isotopes, depending on whether the spatial or temporal organization of tree-ring signals was analysed. To test these hypotheses, we proposed a mixed modelling framework to group isotopic records into potentially homogeneous subsets according to taxonomic or geographical criteria. To this end, carbon and oxygen isotopes were modelled through different variance-covariance structures for the variability among years (at the temporal level) or sites (at the spatial level). Signal-strength parameters were estimated from the outcome of selected models. We found striking differences between deciduous and evergreen oaks in the organization of their temporal and spatial signals. Therefore, the relationships with climate were examined independently for each functional group. While Q. ilex exhibited a large spatial dependence of isotopic signals on the temperature regime, deciduous oaks showed a greater dependence on precipitation, confirming their higher susceptibility to drought. Such contrasting responses to drought among oak types were also observed at the temporal level (interannual variability), with stronger associations with growing-season water availability in deciduous oaks. Thus, our results indicate that Mediterranean deciduous

Vegetation Response and Landscape Dynamics of Indian Summer Monsoon Variations during Holocene: An Eco-Geomorphological Appraisal of Tropical Evergreen Forest Subfossil Logs

Science.gov (United States)

Kumaran, Navnith K. P.; Padmalal, Damodaran; Nair, Madhavan K.; Limaye, Ruta B.; Guleria, Jaswant S.; Srivastava, Rashmi; Shukla, Anumeha

2014-01-01

The high rainfall and low sea level during Early Holocene had a significant impact on the development and sustenance of dense forest and swamp-marsh cover along the southwest coast of India. This heavy rainfall flooded the coastal plains, forest flourishing in the abandoned river channels and other low-lying areas in midland.The coastline and other areas in lowland of southwestern India supply sufficient evidence of tree trunks of wet evergreen forests getting buried during the Holocene period under varying thickness of clay, silty-clay and even in sand sequences. This preserved subfossil log assemblage forms an excellent proxy for eco-geomorphological and palaeoclimate appraisal reported hitherto from Indian subcontinent, and complements the available palynological data. The bulk of the subfossil logs and partially carbonized wood remains have yielded age prior to the Holocene transgression of 6.5 k yrs BP, suggesting therein that flooding due to heavy rainfall drowned the forest cover, even extending to parts of the present shelf. These preserved logs represent a unique palaeoenvironmental database as they contain observable cellular structure. Some of them can even be compared to modern analogues. As these woods belong to the Late Pleistocene and Holocene, they form a valuable source of climate data that alleviates the lack of contemporaneous meteorological records. These palaeoforests along with pollen proxies depict the warmer environment in this region, which is consistent with a Mid Holocene Thermal Maximum often referred to as Holocene Climate Optimum. Thus, the subfossil logs of tropical evergreen forests constitute new indices of Asian palaeomonsoon, while their occurrence and preservation are attributed to eco-geomorphology and hydrological regimes associated with the intensified Asian Summer Monsoon, as recorded elsewhere. PMID:24727672

Elevational Distribution of Adult Trees and Seedlings in a Tropical Montane Transect, Southwest China

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Xiaoyang Song

2016-08-01

Full Text Available Montane habitats are characterized by high variation of environmental factors within small geographic ranges, which offers opportunities to explore how forest assemblages respond to changes in environmental conditions. Understanding the distributional transition of adult trees and seedlings will provide insight into the fate of forest biodiversity in response to future climate change. We investigated the elevational distribution of 156 species of adult trees and 152 species of seedlings in a tropical montane forest in Xishuangbanna, southwest China. Adult trees and seedlings were surveyed within 5 replicate plots established at each of 4 elevational bands (800, 1000, 1200, and 1400 m above sea level. We found that species richness of both adult trees and seedlings changed with elevation, showing a notable decline in diversity values from 1000 to 1200 m. Tree species composition also demonstrated distinct differences between 1000 and 1200 m, marking the division between tropical seasonal rain forest (800 and 1000 m and tropical montane evergreen broad-leaved forest (1200 and 1400 m. The results suggested that soil moisture and temperature regimes were associated with elevational distribution of tree species in this region. We also observed that seedlings from certain species found at high elevations were also distributed in low-elevation zones, but no seedlings of species from low elevations were distributed in high-elevation zones. The increase in temperature and droughts predicted for this region may result in the contraction of tropical seasonal rain forest at lower elevations and a downhill shift of higher tropical montane tree species.

Morphological and phenological shoot plasticity in a Mediterranean evergreen oak facing long-term increased drought.

Science.gov (United States)

Limousin, Jean-Marc; Rambal, Serge; Ourcival, Jean-Marc; Rodríguez-Calcerrada, Jesus; Pérez-Ramos, Ignacio M; Rodríguez-Cortina, Raquel; Misson, Laurent; Joffre, Richard

2012-06-01

Mediterranean trees must adjust their canopy leaf area to the unpredictable timing and severity of summer drought. The impact of increased drought on the canopy dynamics of the evergreen Quercus ilex was studied by measuring shoot growth, leaf production, litterfall, leafing phenology and leaf demography in a mature forest stand submitted to partial throughfall exclusion for 7 years. The leaf area index rapidly declined in the throughfall-exclusion plot and was 19% lower than in the control plot after 7 years of treatment. Consequently, leaf litterfall was significantly lower in the dry treatment. Such a decline in leaf area occurred through a change in branch allometry with a decreased number of ramifications produced and a reduction of the leaf area supported per unit sapwood area of the shoot (LA/SA). The leafing phenology was slightly delayed and the median leaf life span was slightly longer in the dry treatment. The canopy dynamics in both treatments were driven by water availability with a 1-year lag: leaf shedding and production were reduced following dry years; in contrast, leaf turnover was increased following wet years. The drought-induced decrease in leaf area, resulting from both plasticity in shoot development and slower leaf turnover, appeared to be a hydraulic adjustment to limit canopy transpiration and maintain leaf-specific hydraulic conductivity under drier conditions.

Activity, polypeptide and gene identification of thylakoid Ndh complex in trees: potential physiological relevance of fluorescence assays.

Science.gov (United States)

Serrot, Patricia H; Sabater, Bartolomé; Martín, Mercedes

2012-09-01

Three evergreen (Laurus nobilis, Viburnum tinus and Thuja plicata) and two autumnal abscission deciduous trees (Cydonia oblonga and Prunus domestica) have been investigated for the presence (zymogram and immunodetection) and functionality (post-illumination chlorophyll fluorescence) of the thylakoid Ndh complex. The presence of encoding ndh genes has also been investigated in T. plicata. Western assays allowed tentative identification of zymogram NADH dehydrogenase bands corresponding to the Ndh complex after native electrophoresis of solubilized fractions from L. nobilis, V. tinus, C. oblonga and P. domestica leaves, but not in those of T. plicata. However, Ndh subunits were detected after SDS-PAGE of thylakoid solubilized proteins of T. plicata. The leaves of the five plants showed the post-illumination chlorophyll fluorescence increase dependent on the presence of active Ndh complex. The fluorescence increase was higher in autumn in deciduous, but not in evergreen trees, which suggests that the thylakoid Ndh complex could be involved in autumnal leaf senescence. Two ndhB genes were sequenced from T. plicata that differ at the 350 bp 3' end sequence. Comparison with the mRNA revealed that ndhB genes have a 707-bp type II intron between exons 1 (723 bp) and 2 (729 bp) and that the UCA 259th codon is edited to UUA in mRNA. Phylogenetically, the ndhB genes of T. plicata group close to those of Metasequoia, Cryptomeria, Taxodium, Juniperus and Widdringtonia in the cupresaceae branch and are 5' end shortened by 18 codons with respect to that of angiosperms. Copyright © Physiologia Plantarum 2012.

Water availability determines the richness and density of fig trees within Brazilian semideciduous forest landscapes

Science.gov (United States)

Coelho, Luís Francisco Mello; Ribeiro, Milton Cezar; Pereira, Rodrigo Augusto Santinelo

2014-05-01

The success of fig trees in tropical ecosystems is evidenced by the great diversity (+750 species) and wide geographic distribution of the genus. We assessed the contribution of environmental variables on the species richness and density of fig trees in fragments of seasonal semideciduous forest (SSF) in Brazil. We assessed 20 forest fragments in three regions in Sao Paulo State, Brazil. Fig tree richness and density was estimated in rectangular plots, comprising 31.4 ha sampled. Both richness and fig tree density were linearly modeled as function of variables representing (1) fragment metrics, (2) forest structure, and (3) landscape metrics expressing water drainage in the fragments. Model selection was performed by comparing the AIC values (Akaike Information Criterion) and the relative weight of each model (wAIC). Both species richness and fig tree density were better explained by the water availability in the fragment (meter of streams/ha): wAICrichness = 0.45, wAICdensity = 0.96. The remaining variables related to anthropic perturbation and forest structure were of little weight in the models. The rainfall seasonality in SSF seems to select for both establishment strategies and morphological adaptations in the hemiepiphytic fig tree species. In the studied SSF, hemiepiphytes established at lower heights in their host trees than reported for fig trees in evergreen rainforests. Some hemiepiphytic fig species evolved superficial roots extending up to 100 m from their trunks, resulting in hectare-scale root zones that allow them to efficiently forage water and soil nutrients. The community of fig trees was robust to variation in forest structure and conservation level of SSF fragments, making this group of plants an important element for the functioning of seasonal tropical forests.

Glacial Survival of Boreal Trees in Northern Scandinavia

DEFF Research Database (Denmark)

Parducci, L; Jørgensen, Tina; Tollefsrud, M M

2012-01-01

It is commonly believed that trees were absent in Scandinavia during the last glaciation and first recolonized the Scandinavian Peninsula with the retreat of its ice sheet some 9000 years ago. Here, we show the presence of a rare mitochondrial DNA haplotype of spruce that appears unique to Scandi......It is commonly believed that trees were absent in Scandinavia during the last glaciation and first recolonized the Scandinavian Peninsula with the retreat of its ice sheet some 9000 years ago. Here, we show the presence of a rare mitochondrial DNA haplotype of spruce that appears unique...

Transfer factors of 134Cs for olive and orange trees grown on different soils

International Nuclear Information System (INIS)

Skarlou, V.; Nobeli, C.; Anoussis, J.; Haidouti, C.; Papanicolaou, E.

1999-01-01

Transfer factors (TF) of 134 Cs to olive and citrus trees grown on two different soils, were determined for a 3-year greenhouse experiment. Two-year-old trees were transplanted with their entire rootball into large pots containing the contaminated soil (110 kg pot -1 ). The soil was transferred to each pot in layers on the top of which 134 Cs as CsCl was dripped (18.5 MBq pot -1 ). For both evergreen trees, soil type significantly influenced radiocaesium transfer. 134 Cs concentration was lower for the calcareous-heavy soil than for the acid-light soil. Transfer factors of orange trees were higher than those of olive trees in the acid-light soil. Although a significant amount of 134 Cs was measured in olives grown on the acid-light soil, no 134 Cs was detected in the unprocessed olive oil when an oil fraction (5% f.w.) was extracted. On the contrary the edible part of the oranges showed the highest 134 Cs concentration of all plant parts. The relationship between 134 Cs uptake and potassium content in the different plant compartments was also studied when selected trees were cut down. The potassium concentration in the plants was not significantly different between the trees growing in the two types of soil in spite of the big differences in the 134 Cs uptake in the two soils. TF values and potassium content in the different plant compartments of each tree were highly correlated. For both crops transfer factors as well as potassium content were the highest in the developing plant parts (new leaves and branches, flowers). The transfer factors of 134 Cs for the studied trees are in the same order of magnitude as the values of annual crops grown under similar conditions. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

Quantifying ozone uptake at the canopy level of spruce, pine and larch trees at the alpine timberline: an approach based on sap flow measurement

International Nuclear Information System (INIS)

Wieser, G.; Matyssek, R.; Koestner, B.; Oberhuber, W.

2003-01-01

Sap-flow based measurements can be used to estimate ozone uptake at whole-tree and stand levels. - Micro-climatic and ambient ozone data were combined with measurements of sap flow through tree trunks in order to estimate whole-tree ozone uptake of adult Norway spruce (Picea abies), cembran pine (Pinus cembra), and European larch (Larix decidua) trees. Sap flow was monitored by means of the heat balance approach in two trees of each species during the growing season of 1998. In trees making up the stand canopy, the ozone uptake by evergreen foliages was significantly higher than by deciduous ones, when scaled to the ground area. However, if expressed per unit of whole-tree foliage area, ozone flux through the stomata into the needle mesophyll was 1.09, 1.18 and 1.40 nmol m -2 s -1 in Picea abies, Pinus cembra and Larix decidua, respectively. These fluxes are consistent with findings from measurements of needle gas exchange, published from the same species at the study site. It is concluded that the sap flow-based approach offers an inexpensive, spatially and temporally integrating way for estimating ozone uptake at the whole-tree and stand level, intrinsically covering the effect of boundary layers on ozone flux

Simulation of the Unexpected Photosynthetic Seasonality in Amazonian Evergreen Forests by Using an Improved Diffuse Fraction-Based Light Use Efficiency Model

Science.gov (United States)

Yan, Hao; Wang, Shao-Qiang; da Rocha, Humberto R.; Rap, Alexandru; Bonal, Damien; Butt, Nathalie; Coupe, Natalia Restrepo; Shugart, Herman H.

2017-11-01

Understanding the mechanism of photosynthetic seasonality in Amazonian evergreen forests is critical for its formulation in global climate and carbon cycle models. However, the control of the unexpected photosynthetic seasonality is highly uncertain. Here we use eddy-covariance data across a network of Amazonian research sites and a novel evapotranspiration (E) and two-leaf-photosynthesis-coupled model to investigate links between photosynthetic seasonality and climate factors on monthly scales. It reproduces the GPP seasonality (R2 = 0.45-0.69) with a root-mean-square error (RMSE) of 0.67-1.25 g C m-2 d-1 and a Bias of -0.03-1.04 g C m-2 d-1 for four evergreen forest sites. We find that the proportion of diffuse and direct sunlight governs the photosynthetic seasonality via their interaction with sunlit and shaded leaves, supported by a proof that canopy light use efficiency (LUE) has a strong linear relationship with the fraction of diffuse sunlight for Amazonian evergreen forests. In the transition from dry season to rainy season, incident total radiation (Q) decreased while LUE and diffuse fraction increased, which produced the large seasonal increase ( 34%) in GPP of evergreen forests. We conclude that diffuse radiation is an important environmental driver of the photosynthetic seasonality in tropical Amazon forests yet depending on light utilization by sunlit and shaded leaves. Besides, the GPP model simulates the precipitation-dominated GPP seasonality (R2 = 0.40-0.69) at pasture and savanna sites. These findings present an improved physiological method to relate light components with GPP in tropical Amazon.

Tree species traits but not diversity mitigate stem breakage in a subtropical forest following a rare and extreme ice storm.

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Karin Nadrowski

Full Text Available Future climates are likely to include extreme events, which in turn have great impacts on ecological systems. In this study, we investigated possible effects that could mitigate stem breakage caused by a rare and extreme ice storm in a Chinese subtropical forest across a gradient of forest diversity. We used Bayesian modeling to correct stem breakage for tree size and variance components analysis to quantify the influence of taxon, leaf and wood functional traits, and stand level properties on the probability of stem breakage. We show that the taxon explained four times more variance in individual stem breakage than did stand level properties; trees with higher specific leaf area (SLA were less susceptible to breakage. However, a large part of the variation at the taxon scale remained unexplained, implying that unmeasured or undefined traits could be used to predict damage caused by ice storms. When aggregated at the plot level, functional diversity and wood density increased after the ice storm. We suggest that for the adaption of forest management to climate change, much can still be learned from looking at functional traits at the taxon level.

Ozone slows stomatal response to light and leaf wounding in a Mediterranean evergreen broadleaf, Arbutus unedo.

Science.gov (United States)

Paoletti, Elena

2005-04-01

The effect of a 90-d ozone exposure (charcoal-filtered air or 110 nmol mol(-1) O3) on stomatal conductance (gs) was investigated in the Mediterranean evergreen broadleaf Arbutus unedo L. Ozone did not significantly reduce midday steady-state gs compared to controls. However, it slowed stomatal response to abrupt reduction of light intensity and to increasing water stress, applied by severing the leaf midrib. Ozone slowed stomatal closure, rather than aperture. Nevertheless, vein-cutting did not allow ozonated leaves to reach the pre-injury gs levels, like controls did, suggesting re-opening was still, slowly in progress. The sluggish behaviour was recorded 10 days after cessation of O3 exposure ("memory effect") and may affect stomatal control in response to sunflecks and leaf wounding. Mediterranean evergreen broadleaves are regarded as tolerant to O3 exposure. Nevertheless, measurements of steady-state gs at midday may not account for altered stomatal responses to stressors.

Three causes of variation in the photochemical reflectance index (PRI) in evergreen conifers.

Science.gov (United States)

Wong, Christopher Y S; Gamon, John A

2015-04-01

The photochemical reflectance index (PRI) reflects diurnal xanthophyll cycle activity and is also influenced by seasonally changing carotenoid : Chl pigment ratios. Both changing pigment pools and xanthophyll cycle activity contribute to photoprotection in evergreen conifers exposed to boreal winters, but they operate over different timescales, and their relative contribution to the PRI signal has often been unclear. To clarify these responses and their contribution to the PRI signal, leaf PRI, pigment composition, temperature and irradiance were monitored over 2 yr for two evergreen conifers (Pinus contorta and Pinus ponderosa) in a boreal climate. PRI was affected by three distinct processes operating over different timescales and exhibiting contrasting spectral responses. Over the 2 yr study period, the greatest change in PRI resulted from seasonally changing carotenoid : Chl pigment ratios, followed by a previously unreported shifting leaf albedo during periods of deep cold. Remarkably, the smallest change was attributable to the xanthophyll cycle. To properly distinguish these three effects, interpretation of PRI must consider temporal context, physiological responses to evolving environmental conditions, and spectral response. Consideration of the separate mechanisms affecting PRI over different timescales could greatly improve efforts to monitor changing photosynthetic activity using optical remote sensing. © 2014 The Authors New Phytologist © 2014 New Phytologist Trust.

76 FR 51367 - China Shipping Container Lines Co., Ltd.; COSCO Container Lines Company Limited; Evergreen Line A...

Science.gov (United States)

2011-08-18

... FEDERAL MARITIME COMMISSION [Docket No. 11-12] China Shipping Container Lines Co., Ltd.; COSCO Container Lines Company Limited; Evergreen Line A Joint Service Agreement; Hanjin Shipping Co., Ltd... Maritime Commission (Commission) by China Shipping Container Lines Co., Ltd.; COSCO Container Lines Company...

Community assessment of tropical tree biomass

DEFF Research Database (Denmark)

Theilade, Ida; Rutishauser, Ervan; Poulsen, Michael K.

2015-01-01

Background REDD+ programs rely on accurate forest carbon monitoring. Several REDD+ projects have recently shown that local communities can monitor above ground biomass as well as external professionals, but at lower costs. However, the precision and accuracy of carbon monitoring conducted by local...... communities have rarely been assessed in the tropics. The aim of this study was to investigate different sources of error in tree biomass measurements conducted by community monitors and determine the effect on biomass estimates. Furthermore, we explored the potential of local ecological knowledge to assess...... measurement, with special attention given to large and odd-shaped trees. A better understanding of traditional classification systems and concepts is required for local tree identifications and wood density estimates to become useful in monitoring of biomass and tree diversity....

ESTIMATING WOOD VOLUME FOR PINUS BRUTIA TREES IN FOREST STANDS FROM QUICKBIRD-2 IMAGERY

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P. Patias

2016-06-01

Full Text Available Knowledge of forest parameters, such as wood volume, is required for a sustainable forest management. Collecting such information in the field is laborious and even not feasible in inaccessible areas. In this study, tree wood volume is estimated utilizing remote sensing techniques, which can facilitate the extraction of relevant information. The study area is the University Forest of Taxiarchis, which is located in central Chalkidiki, Northern Greece and covers an area of 58km2. The tree species under study is the conifer evergreen species P. brutia (Calabrian pine. Three plot surfaces of 10m radius were used. VHR Quickbird-2 images are used in combination with an allometric relationship connecting the Tree Crown with the Diameter at breast height (Dbh, and a volume table developed for Greece. The overall methodology is based on individual tree crown delineation, based on (a the marker-controlled watershed segmentation approach and (b the GEographic Object-Based Image Analysis approach. The aim of the first approach is to extract separate segments each of them including a single tree and eventual lower vegetation, shadows, etc. The aim of the second approach is to detect and remove the “noisy” background. In the application of the first approach, the Blue, Green, Red, Infrared and PCA-1 bands are tested separately. In the application of the second approach, NDVI and image brightness thresholds are utilized. The achieved results are evaluated against field plot data. Their observed difference are between -5% to +10%.

Maximum Gene-Support Tree

Directory of Open Access Journals (Sweden)

Yunfeng Shan

2008-01-01

Full Text Available Genomes and genes diversify during evolution; however, it is unclear to what extent genes still retain the relationship among species. Model species for molecular phylogenetic studies include yeasts and viruses whose genomes were sequenced as well as plants that have the fossil-supported true phylogenetic trees available. In this study, we generated single gene trees of seven yeast species as well as single gene trees of nine baculovirus species using all the orthologous genes among the species compared. Homologous genes among seven known plants were used for validation of the finding. Four algorithms—maximum parsimony (MP, minimum evolution (ME, maximum likelihood (ML, and neighbor-joining (NJ—were used. Trees were reconstructed before and after weighting the DNA and protein sequence lengths among genes. Rarely a gene can always generate the “true tree” by all the four algorithms. However, the most frequent gene tree, termed “maximum gene-support tree” (MGS tree, or WMGS tree for the weighted one, in yeasts, baculoviruses, or plants was consistently found to be the “true tree” among the species. The results provide insights into the overall degree of divergence of orthologous genes of the genomes analyzed and suggest the following: 1 The true tree relationship among the species studied is still maintained by the largest group of orthologous genes; 2 There are usually more orthologous genes with higher similarities between genetically closer species than between genetically more distant ones; and 3 The maximum gene-support tree reflects the phylogenetic relationship among species in comparison.

Changes in structure and composition of evergreen forests on an altitudinal gradient in the Venezuelan Guayana Shield

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Lionel Hernández

2012-03-01

Full Text Available There have been several ecological studies in forests of the Guayana Shield, but so far none had examined the changes in structure and composition of evergreen forests with altitude. This study describes and analyzes the structure, species composition and soil characteristics of forest stands at different altitudinal zones in Southeastern Venezuelan Guayana, in order to explain the patterns and the main factors that determine the structure and composition of evergreen forests along the altitudinal gradient. Inventories of 3 948 big (>10cm DBH and 1 328 small (5-10cm DBH woody stems were carried out in eleven plots, ranging from 0.1 to 1.0ha, along a 188km long transect with elevations between 290 and 1 395masl. It has been found that 1 hemiepihytes become more dominant and lianas reduce their dominance with increasing altitude and 2 the forest structure in the study area is size-dependent. Five families and 12 genera represented only 9% of the total number of families and genera, respectively, recorded troughout the gradient, but the two groups of taxa comprised more than 50% of the Importance Value (the sum of the relative density and the relative dominance of all measured stems. Moreover, the results suggest that low species richness seems to be associated with the dominance of one or few species. Stand-level wood density (WD of trees decreased significantly with increasing elevation. WD is an indicator of trees’life history strategy. Its decline suggests a change in the functional composition of the forest with increasing altitude. The Canonical Correspondence Analysis (CCA indicated a distinction of the studied forests on the basis of their altitudinal levels and geographic location, and revealed different ecological responses by the forests, to environmental variables along the altitudinal gradient. The variation in species composition, in terms of basal area among stands, was controlled primarily by elevation and secondarily by rainfall

Ozone uptake by adult urban trees based on sap flow measurement

International Nuclear Information System (INIS)

Wang Hua; Zhou Weiqi; Wang Xiaoke; Gao Fuyuan; Zheng Hua; Tong Lei; Ouyang Zhiyun

2012-01-01

The O 3 uptake in 17 adult trees of six urban species was evaluated by the sap flow-based approach under free atmospheric conditions. The results showed very large species differences in ground area scaled whole-tree ozone uptake (F O 3 ), with estimates ranging from 0.61 ± 0.07 nmol m −2 s −1 in Robinia pseudoacacia to 4.80 ± 1.04 nmol m −2 s −1 in Magnolia liliiflora. However, average F O 3 by deciduous foliages was not significantly higher than that by evergreen ones (3.13 vs 2.21 nmol m −2 s −1 , p = 0.160). Species of high canopy conductance for O 3 (G O 3 ) took up more O 3 than those of low G O 3 , but that their sensitivity to vapour pressure deficit (D) were also higher, and their F O 3 decreased faster with increasing D, regardless of species. The responses of F O 3 to D and total radiation led to the relative high flux of O 3 uptake, indicating high ozone risk for urban tree species. - Highlights: ► O 3 uptake by urban trees varied considering contrasting species and study period. ►The responses of G O 3 to microclimate lead to relative high O 3 uptake by urban trees. ►Many urban species are susceptible to O 3 damage. ►The annual O 3 uptake in our study is greatly less than that from modeling approaches. ►The difference suggests considering the species-specific flux in O 3 risk assessment. - Sap flow-based O 3 uptake among urban species suggests high capacity and variation of ozone uptake, as well as potentially detrimental effects to urban species.

Biological and environmental controls on tree transpiration in a suburban landscape

Science.gov (United States)

Peters, Emily B.; McFadden, Joseph P.; Montgomery, Rebecca A.

2010-12-01

Tree transpiration provides a variety of ecosystem services in urban areas, including amelioration of urban heat island effects and storm water management. Tree species vary in the magnitude and seasonality of transpiration owing to differences in physiology, response to climate, and biophysical characteristics, thereby complicating efforts to manage evapotranspiration at city scales. We report sap flux measurements during the 2007 and 2008 growing seasons for dominant tree species in a suburban neighborhood of Minneapolis-Saint Paul, Minnesota, USA. Evergreen needleleaf trees had significantly higher growing season means and annual transpiration per unit canopy area (1.90 kg H2O m-2 d-1 and 307 kg H2O m-2 yr-1, respectively) than deciduous broadleaf trees (1.11 kg H2O m-2 d-1 and 153 kg H2O m-2 yr-1, respectively) because of a smaller projected canopy area (31.1 and 73.6 m2, respectively), a higher leaf area index (8.8 and 5.5 m2 m-2, respectively), and a longer growth season (8 and 4 months, respectively). Measurements also showed patterns consistent with the species' differences in xylem anatomy (conifer, ring porous, and diffuse porous). As the growing season progressed, conifer and diffuse porous genera had increased stomatal regulation to high vapor pressure deficit, while ring porous genera maintained greater and more constant stomatal regulation. These results suggest that evaporative responses to climate change in urban ecosystems will depend in part on species composition. Overall, plant functional type differences in canopy structure and growing season length were most important in explaining species' differences in midsummer and annual transpiration, offering an approach to predicting the evapotranspiration component of urban water budgets.

Age and distribution of an evergreen clonal shrub in the Coweeta basin: Rhododendron maximum L

Science.gov (United States)

Katherine J. Elliott; James M. Vose

2012-01-01

Rhododendron maximum L. is an evergreen, clonal shrub that forms a dominant sub-canopy layer and is a key species in southern Appalachian forests. We investigated the age and distribution of R. maximum across the Coweeta Basin, a 1626 ha watershed in western North Carolina. We selected 16 perennial, second-order streams and used a Global Positioning System to establish...

The diversity and richness of tree species of Tambang Sawah forest Kerinci-Seblat National Park Sumatra Indonesia

Directory of Open Access Journals (Sweden)

Agus Susatya

2010-12-01

Full Text Available The conservation of tropical ecosystem is increasingly relevant as the recent global warming and climate change generate serious impacts on human life. Tropical forest becomes an important ecosystem to fight global warming due to its capability to sequester atmospheric carbon and to mitigate climate change. It is very unfortunate that such a vital ecosystem has been severely subjected to conversion to both plantations and illegal loggings. The tropical ecosystem has long been recognized to have high species diversity, but very few individual trees per species. The latter is almost ignored, even though can certainly bring serious difficulties on tree conservation. The objectives of the research were to know the tree community structure of Tambang Sawah Forest, Kerinci-Seblat National Park, and to determine the rareness of tree species. A plot of 1 ha was established at Tambang Sawah, Kerinci-Seblat National Park, Lebong Regency. All trees with BDH of > 5 cm were collected their herbarium specimens, and identifi ed. The results showed that Tambang Sawah forest consists of 42 families, 94 genera, and 185 tree species/ha. It has 19.51% (8 families, and 26.82% (10 families respectively categorized as very rare and rare. The pattern also occurs at genus level, where both categories contribute to 81.91% (78 genera of the total genera. In species level, both are respectively 90 and 28 species, and altogether contribute to 63.78% of the total species. These values appeared higher than that of the other forests in Bengkulu. Across taxon level, very rare and rare categories appeared to be an ecological attribute in Sumatran forests. This implies that the loss of single tree can cause the loss of entire family. The conservation works even turn into more difficult, because tropical trees are commonly diocious, even bisexual trees, they tend to be self-incompatible, and out-crossed, and required at least 200 mature trees to ensure sexual regeneration and to

Sampling strategies for efficient estimation of tree foliage biomass

Science.gov (United States)

Hailemariam Temesgen; Vicente Monleon; Aaron Weiskittel; Duncan Wilson

2011-01-01

Conifer crowns can be highly variable both within and between trees, particularly with respect to foliage biomass and leaf area. A variety of sampling schemes have been used to estimate biomass and leaf area at the individual tree and stand scales. Rarely has the effectiveness of these sampling schemes been compared across stands or even across species. In addition,...

Improving winter leaf area index estimation in evergreen coniferous forests and its significance in carbon and water fluxes modeling

Science.gov (United States)

Wang, R.; Chen, J. M.; Luo, X.

2016-12-01

Modeling of carbon and water fluxes at the continental and global scales requires remotely sensed LAI as inputs. For evergreen coniferous forests (ENF), severely underestimated winter LAI has been one of the issues for mostly available remote sensing products, which could cause negative bias in the modeling of Gross Primary Productivity (GPP) and evapotranspiration (ET). Unlike deciduous trees which shed all the leaves in winter, conifers retains part of their needles and the proportion of the retained needles depends on the needle longevity. In this work, the Boreal Ecosystem Productivity Simulator (BEPS) was used to model GPP and ET at eight FLUXNET Canada ENF sites. Two sets of LAI were used as the model inputs: the 250m 10-day University of Toronto (U of T) LAI product Version 2 and the corrected LAI based on the U of T LAI product and the needle longevity of the corresponding tree species at individual sites. Validating model daily GPP (gC/m2) against site measurements, the mean RMSE over eight sites decreases from 1.85 to 1.15, and the bias changes from -0.99 to -0.19. For daily ET (mm), mean RMSE decreases from 0.63 to 0.33, and the bias changes from -0.31 to -0.16. Most of the improvements occur in the beginning and at the end of the growing season when there is large correction of LAI and meanwhile temperature is still suitable for photosynthesis and transpiration. For the dormant season, the improvement in ET simulation mostly comes from the increased interception of precipitation brought by the elevated LAI during that time. The results indicate that model performance can be improved by the application the corrected LAI. Improving the winter RS LAI can make a large impact on land surface carbon and energy budget.

Rare B decays, rare τ decays, and grand unification

International Nuclear Information System (INIS)

Sher, M.; Yuan, Y.

1991-01-01

In multi-Higgs-boson extensions of the standard model, tree-level flavor-changing neutral currents exist naturally, unless suppressed by some symmetry. For a given rate, the exchanged scalar or pseudoscalar mass is very sensitive to the flavor-changing coupling between the first two generations. Since the Yukawa couplings of the first two generations are unknown and certainly very small, bounds which rely on some assumed value of this flavor-changing coupling are quite dubious. One might expect the size (and reliability) of the Yukawa couplings involving the third generation to be greater. In this paper, we consider processes involving τ's and B's, and determine the bounds on the flavor-changing couplings which involve third-generation fields. The strongest bound in the quark sector comes from B-bar B mixing and in the lepton sector, surprisingly, from μ→eγ. It is then noted that the flavor-changing couplings in the quark sector are related to those in the lepton sector in many grand unified theories, and one can ask whether an analysis of rare τ decays or rare B decays will provide the strongest constraints. We show that rare B decays provide the strongest bounds, and that no useful information can be obtained from rare τ decays. It is also noted that the most promising decay modes are B→Kμτ and B s →μτ, and we urge experimenters to look for rare decay modes of the B in which a τ is in the final state

Ozone slows stomatal response to light and leaf wounding in a Mediterranean evergreen broadleaf, Arbutus unedo

Energy Technology Data Exchange (ETDEWEB)

Paoletti, Elena [Istituto Protezione Piante, Consiglio Nazionale delle Ricerche, Via Madonna del Piano, I-50019 Sesto Fiorentino (Italy)]. E-mail: e.paoletti@ipp.cnr.it

2005-04-01

The effect of a 90-d ozone exposure (charcoal-filtered air or 110 nmol mol{sup -1} O{sub 3}) on stomatal conductance (g{sub s}) was investigated in the Mediterranean evergreen broadleaf Arbutus unedo L. Ozone did not significantly reduce midday steady-state g{sub s} compared to controls. However, it slowed stomatal response to abrupt reduction of light intensity and to increasing water stress, applied by severing the leaf midrib. Ozone slowed stomatal closure, rather than aperture. Nevertheless, vein-cutting did not allow ozonated leaves to reach the pre-injury g{sub s} levels, like controls did, suggesting re-opening was still, slowly in progress. The sluggish behaviour was recorded 10 days after cessation of O{sub 3} exposure ('memory effect') and may affect stomatal control in response to sunflecks and leaf wounding. Mediterranean evergreen broadleaves are regarded as tolerant to O{sub 3} exposure. Nevertheless, measurements of steady-state g{sub s} at midday may not account for altered stomatal responses to stressors. - In response to ozone exposure, stomata were slower in closing rather than in opening.

Ozone slows stomatal response to light and leaf wounding in a Mediterranean evergreen broadleaf, Arbutus unedo

International Nuclear Information System (INIS)

Paoletti, Elena

2005-01-01

The effect of a 90-d ozone exposure (charcoal-filtered air or 110 nmol mol -1 O 3 ) on stomatal conductance (g s ) was investigated in the Mediterranean evergreen broadleaf Arbutus unedo L. Ozone did not significantly reduce midday steady-state g s compared to controls. However, it slowed stomatal response to abrupt reduction of light intensity and to increasing water stress, applied by severing the leaf midrib. Ozone slowed stomatal closure, rather than aperture. Nevertheless, vein-cutting did not allow ozonated leaves to reach the pre-injury g s levels, like controls did, suggesting re-opening was still, slowly in progress. The sluggish behaviour was recorded 10 days after cessation of O 3 exposure ('memory effect') and may affect stomatal control in response to sunflecks and leaf wounding. Mediterranean evergreen broadleaves are regarded as tolerant to O 3 exposure. Nevertheless, measurements of steady-state g s at midday may not account for altered stomatal responses to stressors. - In response to ozone exposure, stomata were slower in closing rather than in opening

Abundant and rare spiders on tree trunks in German forests (Arachnida, Araneae

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Blick, Theo

2011-01-01

Full Text Available The spider fauna active on the bark of trees in forests on eight sites in different regions in Germany was investigated. Trunk eclectors at about 2-4 meters height on living trees were used in different regions of Germany (SW Bavaria, Hesse, Brandenburg between 1990 and 2003. In Hesse eclectors were also used on dead beech trees (standing and lying. In this study data, mainly from beech (Fagus sylvatica and spruce (Picea abies, from May to October are compared – whole year samples (including winter are only available from Hesse. A total of 334 spider species were recorded with these bark traps, i.e. about one third of the spider species known from Germany. On average, each of the eight regions yielded 140.5 (± 26.2 species, each single tree 40.5 (± 12.2 species and 502 (± 452 adult spiders per season (i.e. May to Oct.. The 20 most abundant species are listed and characterised in detail. Six of the 20 species were not known to be abundant on bark, three prefer conifers and three beech/broadleaf. Even in winter (December-March there was a remarkably high activity on the trunks. However, only a few species occur exclusively or mainly in winter. Finally, the rarity of some bark spider species is discussed and details (all known records in Germany, phenology of four of them are presented (Clubiona leucaspis, Gongylidiellum edentatum, Kratochviliella bicapitata, Oreonetides quadridentatus. The diversity and importance of the spider fauna on bark in Central Europe is still underestimated.

78 FR 69932 - Tedesco Family ESB Trust, et al.-Purchase of Certain Assets and Membership Interests-Evergreen...

Science.gov (United States)

2013-11-21

... Trails, Inc. d/b/a Horizon Coach Lines, et al. AGENCY: Surface Transportation Board, DOT. ACTION: Notice... Franmar's purchase of certain motor coach and non- motor coach assets of Evergreen Trails, Inc. d/b/a... (Family Trust), on behalf of Franmar Leasing, Inc. (Franmar), together with the Francis Tedesco Revocable...

Seasonal photosynthetic activity in evergreen conifer leaves monitored with spectral reflectance

Science.gov (United States)

Wong, C. Y.; Gamon, J. A.

2013-12-01

Boreal evergreen conifers must maintain photosynthetic systems in environments where temperatures vary greatly across seasons from high temperatures in the summer to freezing levels in the winter. This involves seasonal downregulation and photoprotection during periods of extreme temperatures. To better understand this downregulation, seasonal dynamics of photosynthesis of lodgepole (Pinus contorta D.) and ponderosa pine (Pinus ponderosa D.) were monitored in Edmonton, Canada over two years. Spectral reflectance at the leaf and stand scales was measured weekly and the Photochemical Reflectance Index (PRI), often used as a proxy for chlorophyll and carotenoid pigment levels and photosynthetic light-use efficiency (LUE), was used to track the seasonal dynamics of photosynthetic activity. Additional physiological measurements included leaf pigment content, chlorophyll fluorescence, and gas exchange. All the metrics indicate large seasonal changes in photosynthetic activity, with a sharp transition from winter downregulation to active photosynthesis in the spring and a more gradual fall transition into winter. The PRI was a good indicator of several other variables including seasonally changing photosynthetic activity, chlorophyll fluorescence, photosynthetic LUE, and pigment pool sizes. Over the two-year cycle, PRI was primarily driven by changes in constitutive (chlorophyll:carotenoid) pigment levels correlated with seasonal photosynthetic activity, with a much smaller variation caused by diurnal changes in xanthophyll cycle activity (conversion between violaxanthin & zeaxanthin). Leaf and canopy scale PRI measurements exhibited parallel responses during the winter-spring transition. Together, our findings indicate that evergreen conifers photosynthetic system possesses a remarkable degree of resilience in response to large temperature changes across seasons, and that optical remote sensing can be used to observe the seasonal effects on photosynthesis and

Seasonal patterns of carbon allocation to respiratory pools in 60-yr-old deciduous (Fagus sylvatica) and evergreen (Picea abies) trees assessed via whole-tree stable carbon isotope labeling.

Science.gov (United States)

Kuptz, Daniel; Fleischmann, Frank; Matyssek, Rainer; Grams, Thorsten E E

2011-07-01

• The CO(2) efflux of adult trees is supplied by recent photosynthates and carbon (C) stores. The extent to which these C pools contribute to growth and maintenance respiration (R(G) and R(M), respectively) remains obscure. • Recent photosynthates of adult beech (Fagus sylvatica) and spruce (Picea abies) trees were labeled by exposing whole-tree canopies to (13) C-depleted CO(2). Label was applied three times during the year (in spring, early summer and late summer) and changes in the stable C isotope composition (δ(13) C) of trunk and coarse-root CO(2) efflux were quantified. • Seasonal patterns in C translocation rate (CTR) and fractional contribution of label to CO(2) efflux (F(Label-Max)) were found. CTR was fastest during early summer. In beech, F(Label-Max) was lowest in spring and peaked in trunks during late summer (0.6 ± 0.1, mean ± SE), whereas no trend was observed in coarse roots. No seasonal dynamics in F(Label-Max) were found in spruce. • During spring, the R(G) of beech trunks was largely supplied by C stores. Recent photosynthates supplied growth in early summer and refilled C stores in late summer. In spruce, CO(2) efflux was constantly supplied by a mixture of stored (c. 75%) and recent (c. 25%) C. The hypothesis that R(G) is exclusively supplied by recent photosynthates was rejected for both species. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

Global quantification of contrasting leaf life span strategies for deciduous and evergreen species in response to environmental conditions.

NARCIS (Netherlands)

van Ommen Kloeke, A.E.E.; Douma, J.C.; Ordonez Barragan, J.C.; Reick, P.B.; van Bodegom, P.M.

2012-01-01

Aim Species with deciduous and evergreen leaf habits typically differ in leaf life span (LLS). Yet quantification of the response of LLS, within each habit, to key environmental conditions is surprisingly lacking. The aim of this study is to quantify LLS strategies of the two leaf habits under

Cafts: computer aided fault tree analysis

International Nuclear Information System (INIS)

Poucet, A.

1985-01-01

The fault tree technique has become a standard tool for the analysis of safety and reliability of complex system. In spite of the costs, which may be high for a complete and detailed analysis of a complex plant, the fault tree technique is popular and its benefits are fully recognized. Due to this applications of these codes have mostly been restricted to simple academic examples and rarely concern complex, real world systems. In this paper an interactive approach to fault tree construction is presented. The aim is not to replace the analyst, but to offer him an intelligent tool which can assist him in modeling complex systems. Using the CAFTS-method, the analyst interactively constructs a fault tree in two phases: (1) In a first phase he generates an overall failure logic structure of the system; the macrofault tree. In this phase, CAFTS features an expert system approach to assist the analyst. It makes use of a knowledge base containing generic rules on the behavior of subsystems and components; (2) In a second phase the macrofault tree is further refined and transformed in a fully detailed and quantified fault tree. In this phase a library of plant-specific component failure models is used

Potential and limitations of using digital repeat photography to track structural and physiological phenology in Mediterranean tree-grass ecosystems

Science.gov (United States)

Luo, Yunpeng; EI-Madany, Tarek; Filippa, Gianluca; Carrara, Arnaud; Cremonese, Edoardo; Galvagno, Marta; Hammer, Tiana; Pérez-Priego, Oscar; Reichstein, Markus; Martín Isabel, Pilar; González Cascón, Rosario; Migliavacca, Mirco

2017-04-01

Tree-Grass ecosystems are global widely distributed (16-35% of the land surface). However, its phenology (especially in water-limited areas) has not yet been well characterized and modeled. By using commercial digital cameras, continuous and relatively vast phenology data becomes available, which provides a good opportunity to monitor and develop a robust method used to extract the important phenological events (phenophases). Here we aimed to assess the usability of digital repeat photography for three Tree-Grass Mediterranean ecosystems over two different growing seasons (Majadas del Tietar, Spain) to extract critical phenophases for grass and evergreen broadleaved trees (autumn regreening of grass- Start of growing season; resprouting of tree leaves; senescence of grass - End of growing season), assess their uncertainty, and to correlate them with physiological phenology (i.e. phenology of ecosystem scale fluxes such as Gross Primary Productivity, GPP). We extracted green chromatic coordinates (GCC) and camera based normalized difference vegetation index (Camera-NDVI) from an infrared enabled digital camera using the "Phenopix" R package. Then we developed a novel method to retrieve important phenophases from GCC and Camera-NDVI from various region of interests (ROIs) of the imagery (tree areas, grass, and both - ecosystem) as well as from GPP, which was derived from Eddy Covariance tower in the same experimental site. The results show that, at ecosystem level, phenophases derived from GCC and Camera-NDVI are strongly correlated (R2 = 0.979). Remarkably, we observed that at the end of growing season phenophases derived from GCC were systematically advanced (ca. 8 days) than phenophase from Camera-NDVI. By using the radiative transfer model Soil Canopy Observation Photochemistry and Energy (SCOPE) we demonstrated that this delay is related to the different sensitivity of GCC and NDVI to the fraction of green/dry grass in the canopy, resulting in a systematic

Roots of pioneer trees in the lower sub-tropical area of Dinghushan, Guangdong, China

Institute of Scientific and Technical Information of China (English)

HAO Yan-ru; PENG Shao-lin; MO Jiang-ming; LIU Xin-wei; CHEN Zhuo-quan; ZHOU Kai; WU Jin-rong

2006-01-01

Representative pioneer tree root systems in the subtropical area of South China were examined with regard to their structure, underground stratification and biomass distribution. Excavation of skeleton roots and observation of fine roots of seven species including the Euphorbiaceae, Theaceae, Melastomataceae, Lauraceae and Fagaceae families was carried out. The results showed that: (1) Pioneer tree roots in the first stage of natural succession were of two types, one characterized by taproot system with bulky plagiotropic branches; the other characterized by flat root system with several tabular roots. The late mesophilous tree roots were characterized by one obvious taproot and tactic braches roots up and down. Shrub species roots were characterized by heart fibrous root type featured both by horizontally and transversally growing branches. Root shapes varied in different dominant species at different stages of succession. (2) Roots of the different species varied in the external features-color, periderm and structure of freshly cut slash. (3) In a set of successional stages the biomass of tree roots increased linearly with the age of growth. During monsoon, the total root biomass amounted to 115.70 t/ha in the evergreen broad-leaved forest; 50.61t/ha in needle and broad-leaved mixed forest dominated by coniferous forest; and 64.20 t/ha in broad-and needle-leaved mixed forest dominated by broad-leaved heliophytes, and are comparable to the underground biomass observed in similar tropical forests. Thisis the first report about roots characteristics of forest in the lower sub-tropical area of Dinghushan, Guangdong, China.

An analysis of the decadal variability of Carbon fluxes in three evergreen European forests through modelling

Science.gov (United States)

Delpierre, N.; Dufrêne, E.

2009-04-01

With several sites measuring mass and energy turbulent fluxes for more than ten years, the CarboEurope database appears as a valuable resource for addressing the question of the determinism of the interannual variability of carbon (C) and water balances in forests ecosystems. Apart from major climate-driven anomalies during the anomalous 2003 summer and 2007 spring, little is known about the factors driving interannual variability (IAV) of the C balance in forest ecosystems. We used the CASTANEA process-based model to simulate the C and W fluxes and balances of three European evergreen forests for the 2000-2007 period (FRPue Quercus ilex, 44°N; DETha Picea abies, 51°N; FIHyy Pinus sylvestris, 62°N). The model fairly reproduced the day-to-day variability of measured fluxes, accounting for 70-81%, 77-91% and 59-90% of the daily variance of measured NEP, GPP and TER, respectively. However, the model was challenged in representing the IAV of fluxes integrated on an annual time scale. It reproduced ca. 80% of the interannual variance of measured GPP, but no significant relationship could be established between annual measured and modelled NEP or TER. Accordingly, CASTANEA appeared as a suitable tool for disentangling the influence of climate and biological processes on GPP at mutiple time scales. We show that climate and biological processes relative influences on the modelled GPP vary from year to year in European evergreen forests. Water-stress related and phenological processes (i.e. release of the winter thermal constraint on photosynthesis in evergreens) appear as primary drivers for the particular 2003 and 2007 years, respectively, but the relative influence of other climatic factors widely varies for less remarkable years at all sites. We discuss shortcomings of the method, as related to the influence of compensating errors in the simulated fluxes, and assess the causes of the model poor ability to represent the IAV of the annual sums of NEP and TER.

Delayed Recurrence of Atypical Pulmonary Carcinoid Cluster: A Rare Occurrence

Directory of Open Access Journals (Sweden)

Salim Surani

2014-01-01

Full Text Available Carcinoid is one of the most common tumors of the gastrointestinal tract followed by the tracheobronchial tree. Bronchial carcinoid compromises 20% of total carcinoid and accounts for 1–5% of pulmonary malignancies. Carcinoid can be typical or atypical, with atypical carcinoid compromises 10% of the carcinoid tumors. Carcinoid usually presents as peripheral lung lesion or solitary endobronchial abnormality. Rarely it can present as multiple endobronchial lesion. We hereby present a rare case of an elderly gentleman who had undergone resection of right middle and lower lobe of lung for atypical carcinoid. Seven years later he presented with cough. CT scan of chest revealed right hilar mass. Flexible bronchoscopy revealed numerous endobronchial polypoid lesions in the tracheobronchial tree. Recurrent atypical carcinoid was then confirmed on biopsy.

Vegetation in karst terrain of southwestern China allocates more biomass to roots

Science.gov (United States)

Ni, J.; Luo, D. H.; Xia, J.; Zhang, Z. H.; Hu, G.

2015-07-01

In mountainous areas of southwestern China, especially Guizhou province, continuous, broadly distributed karst landscapes with harsh and fragile habitats often lead to land degradation. Research indicates that vegetation located in karst terrains has low aboveground biomass and land degradation that reduces vegetation biomass, but belowground biomass measurements are rarely reported. Using the soil pit method, we investigated the root biomass of karst vegetation in five land cover types: grassland, grass-scrub tussock, thorn-scrub shrubland, scrub-tree forest, and mixed evergreen and deciduous forest in Maolan, southern Guizhou province, growing in two different soil-rich and rock-dominated habitats. The results show that roots in karst vegetation, especially the coarse roots, and roots in rocky habitats are mostly distributed in the topsoil layers (89 % on the surface up to 20 cm depth). The total root biomass in all habitats of all vegetation degradation periods is 18.77 Mg ha-1, in which roots in rocky habitat have higher biomass than in earthy habitat, and coarse root biomass is larger than medium and fine root biomass. The root biomass of mixed evergreen and deciduous forest in karst habitat (35.83 Mg ha-1) is not greater than that of most typical, non-karst evergreen broad-leaved forests in subtropical regions of China, but the ratio of root to aboveground biomass in karst forest (0.37) is significantly greater than the mean ratio (0.26 ± 0.07) of subtropical evergreen forests. Vegetation restoration in degraded karst terrain will significantly increase the belowground carbon stock, forming a potential regional carbon sink.

Rare anomalies of the architecture of the bronchial tree

Energy Technology Data Exchange (ETDEWEB)

Scheel, W.; Eger, H.

1986-12-01

Six cases of rare bronchial anomalies are presented (3 complete rightsided hyparterial bronchial distributions, 1 partial rightsided hyparterial bronchial supply of the upper lobe, 2 cases of atresia of the left apico-posterior bronchus). Emphasis is placed on the bronchographic elucidation of the changed bronchial segmental topic if additive or subtractive bronchial anomalies are found endoscopically especially with regard to preoperative aspects.

Mathematical analysis and modeling of epidemics of rubber tree root diseases: Probability of infection of an individual tree

Energy Technology Data Exchange (ETDEWEB)

Chadoeuf, J.; Joannes, H.; Nandris, D.; Pierrat, J.C.

1988-12-01

The spread of root diseases in rubber tree (Hevea brasiliensis) due to Rigidoporus lignosus and Phellinus noxius was investigated epidemiologically using data collected every 6 month during a 6-year survey in a plantation. The aim of the present study is to see what factors could predict whether a given tree would be infested at the following inspection. Using a qualitative regression method we expressed the probability of pathogenic attack on a tree in terms of three factors: the state of health of the surrounding trees, the method used to clear the forest prior to planting, and evolution with time. The effects of each factor were ranked, and the roles of the various classes of neighbors were established and quantified. Variability between successive inspections was small, and the method of forest clearing was important only while primary inocula in the soil were still infectious. The state of health of the immediate neighbors was most significant; more distant neighbors in the same row had some effect; interrow spread was extremely rare. This investigation dealt only with trees as individuals, and further study of the interrelationships of groups of trees is needed.

Identifying and Selecting Plants for the Landscape. Volume 23, Number 5.

Science.gov (United States)

Rodekohr, Sherie; Harris, Clark Richard

This handbook on identifying and selecting landscape plants can be used as a reference in landscaping courses or on an individual basis. The first of two sections, Identifying Plants for the Landscape, contains the following tables: shade tree identification; flowering tree identification; evergreen tree identification; flowering shrub…

Rare anomalies of the architecture of the bronchial tree

International Nuclear Information System (INIS)

Scheel, W.; Eger, H.

1986-01-01

Six cases of rare bronchial anomalies are presented (3 complete rightsided hyparterial bronchial distributions, 1 partial rightsided hyparterial bronchial supply of the upper lobe, 2 cases of atresia of the left apico-posterior bronchus). Emphasis is placed on the bronchographic elucidation of the changed bronchial segmental topic if additive or subtractive bronchial anomalies are found endoscopically especially with regard to preoperative aspects. (orig.) [de

Solar Physics at Evergreen: Solar Dynamo and Chromospheric MHD

Science.gov (United States)

Zita, E. J.; Maxwell, J.; Song, N.; Dikpati, M.

2006-12-01

We describe our five year old solar physics research program at The Evergreen State College. Famed for its cloudy skies, the Pacific Northwest is an ideal location for theoretical and remote solar physics research activities. Why does the Sun's magnetic field flip polarity every 11 years or so? How does this contribute to the magnetic storms Earth experiences when the Sun's field reverses? Why is the temperature in the Sun's upper atmosphere millions of degrees higher than the Sun's surface temperature? How do magnetic waves transport energy in the Sun’s chromosphere and the Earth’s atmosphere? How does solar variability affect climate change? Faculty and undergraduates investigate questions such as these in collaboration with the High Altitude Observatory (HAO) at the National Center for Atmospheric Research (NCAR) in Boulder. We will describe successful student research projects, logistics of remote computing, and our current physics investigations into (1) the solar dynamo and (2) chromospheric magnetohydrodynamics.

Evergreening, patent challenges, and effective market life in pharmaceuticals.

Science.gov (United States)

Hemphill, C Scott; Sampat, Bhaven N

2012-03-01

Observers worry that generic patent challenges are on the rise and reduce the effective market life of drugs. A related concern is that challenges disproportionately target high-sales drugs, reducing market life for these "blockbusters." To study these questions, we examine new data on generic entry over the past decade. We show that challenges are more common for higher sales drugs. We also demonstrate a slight increase in challenges over this period, and a sharper increase for early challenges. Despite this, effective market life is stable across drug sales categories, and has hardly changed over the decade. To better understand these results, we examine which patents are challenged on each drug, and show that lower quality and later expiring patents disproportionately draw challenges. Overall, this evidence suggests that challenges serve to maintain, not reduce, the historical baseline of effective market life, thereby limiting the effectiveness of "evergreening" by branded firms. Copyright © 2012 Elsevier B.V. All rights reserved.

Leaf development and demography explain photosynthetic seasonality in Amazon evergreen forests

Science.gov (United States)

Wu, Jin; Albert, Lauren; Lopes, Aline; Restrepo-Coupe, Natalia; Hayek, Matthew; Wiedemann, Kenia T.; Guan, Kaiyu; Stark, Scott C.; Christoffersen, Bradley; Prohaska, Neill; Tavares, Julia V.; Marostica, Suelen; Kobayashi, Hideki; Ferreira, Maurocio L.; Campos, Kleber Silva; da Silva, Rodrigo; Brando, Paulo M.; Dye, Dennis G.; Huxman, Travis E.; Huete, Alfredo; Nelson, Bruce; Saleska, Scott

2016-01-01

In evergreen tropical forests, the extent, magnitude, and controls on photosynthetic seasonality are poorly resolved and inadequately represented in Earth system models. Combining camera observations with ecosystem carbon dioxide fluxes at forests across rainfall gradients in Amazônia, we show that aggregate canopy phenology, not seasonality of climate drivers, is the primary cause of photosynthetic seasonality in these forests. Specifically, synchronization of new leaf growth with dry season litterfall shifts canopy composition toward younger, more light-use efficient leaves, explaining large seasonal increases (~27%) in ecosystem photosynthesis. Coordinated leaf development and demography thus reconcile seemingly disparate observations at different scales and indicate that accounting for leaf-level phenology is critical for accurately simulating ecosystem-scale responses to climate change.

Effect of urbanization on the structure and functional traits of remnant subtropical evergreen broad-leaved forests in South China

Science.gov (United States)

Liujing Huang; Hongfeng Chen; Hai Ren; Jun Wang; Qinfeng Guo

2013-01-01

We investigated the effects of major environmental drivers associated with urbanization on species diversity and plant functional traits (PFTs) in the remnant subtropical evergreen broad-leaved forests in Metropolitan Guangzhou (Guangdong, China). Twenty environmental factors including topography, light, and soil properties were used to quantify the effects of...

Flacourtia montana

Indian Academy of Sciences (India)

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Flacourtia montana Graham, referred to as Indian plum or mountain sweet thorn is restricted only to the evergreen and semi-evergreen forests of the Western Ghats. It belongs to the willow family, i.e., Salicaceae. The tree trunk at its base bears several long, sharp thorns. In the dry season the plant produces scarlet colored, ...

Age-dependent leaf physiology and consequences for crown-scale carbon uptake during the dry season in an Amazon evergreen forest.

Science.gov (United States)

Albert, Loren P; Wu, Jin; Prohaska, Neill; de Camargo, Plinio Barbosa; Huxman, Travis E; Tribuzy, Edgard S; Ivanov, Valeriy Y; Oliveira, Rafael S; Garcia, Sabrina; Smith, Marielle N; Oliveira Junior, Raimundo Cosme; Restrepo-Coupe, Natalia; da Silva, Rodrigo; Stark, Scott C; Martins, Giordane A; Penha, Deliane V; Saleska, Scott R

2018-03-04

Satellite and tower-based metrics of forest-scale photosynthesis generally increase with dry season progression across central Amazônia, but the underlying mechanisms lack consensus. We conducted demographic surveys of leaf age composition, and measured the age dependence of leaf physiology in broadleaf canopy trees of abundant species at a central eastern Amazon site. Using a novel leaf-to-branch scaling approach, we used these data to independently test the much-debated hypothesis - arising from satellite and tower-based observations - that leaf phenology could explain the forest-scale pattern of dry season photosynthesis. Stomatal conductance and biochemical parameters of photosynthesis were higher for recently mature leaves than for old leaves. Most branches had multiple leaf age categories simultaneously present, and the number of recently mature leaves increased as the dry season progressed because old leaves were exchanged for new leaves. These findings provide the first direct field evidence that branch-scale photosynthetic capacity increases during the dry season, with a magnitude consistent with increases in ecosystem-scale photosynthetic capacity derived from flux towers. Interactions between leaf age-dependent physiology and shifting leaf age-demographic composition are sufficient to explain the dry season photosynthetic capacity pattern at this site, and should be considered in vegetation models of tropical evergreen forests. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

The seasonality of butterflies in a semi-evergreen forest: Gibbon Wildlife Sanctuary, Assam, northeastern India

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Arun P. Singh

2015-01-01

Full Text Available A study spanning 3.7 years on the butterflies of Gibbon Wildlife Sanctuary GWS (21km2, a semi-evergreen forest, in Jorhat District of Assam, northeastern India revealed 211 species of butterflies belonging to 115 genera including 19 papilionids and seven ‘rare’ and ‘very rare’ species as per Evans list of the Indian sub-continent (Great Blue Mime Papilio paradoxa telearchus; Brown Forest BobScobura woolletti; Snowy Angle Darpa pteria dealbatahas; Constable Dichorragia nesimachus; Grey Baron Euthalia anosia anosia; Sylhet Oakblue Arhopala silhetensis; Branded Yamfly Yasoda tripunctata. The butterflies showed a strong seasonality pattern in this forest with only one significant peak during the post monsoon (September-October when 118 species were in flight inside the forest which slowly declined to 92 species in November-December. Another peak (102 species was visible after winter from March to April. Species composition showed least similarity between pre-monsoon (March-May and post-monsoon (October-November seasons. The number of papilionid species were greater from July to December as compared from January to June. The findings of this study suggest that the pattern of seasonality in a semi-evergreen forest in northeastern India is distinct from that of the sub-tropical lowland forest in the Himalaya. Favourable logistics and rich diversity in GWS points to its rich potential in promoting ‘butterfly inclusive ecotourism’ in this remnant forest.

The trait contribution to wood decomposition rates of 15 Neotropical tree species.

Science.gov (United States)

van Geffen, Koert G; Poorter, Lourens; Sass-Klaassen, Ute; van Logtestijn, Richard S P; Cornelissen, Johannes H C

2010-12-01

The decomposition of dead wood is a critical uncertainty in models of the global carbon cycle. Despite this, relatively few studies have focused on dead wood decomposition, with a strong bias to higher latitudes. Especially the effect of interspecific variation in species traits on differences in wood decomposition rates remains unknown. In order to fill these gaps, we applied a novel method to study long-term wood decomposition of 15 tree species in a Bolivian semi-evergreen tropical moist forest. We hypothesized that interspecific differences in species traits are important drivers of variation in wood decomposition rates. Wood decomposition rates (fractional mass loss) varied between 0.01 and 0.31 yr(-1). We measured 10 different chemical, anatomical, and morphological traits for all species. The species' average traits were useful predictors of wood decomposition rates, particularly the average diameter (dbh) of the tree species (R2 = 0.41). Lignin concentration further increased the proportion of explained inter-specific variation in wood decomposition (both negative relations, cumulative R2 = 0.55), although it did not significantly explain variation in wood decomposition rates if considered alone. When dbh values of the actual dead trees sampled for decomposition rate determination were used as a predictor variable, the final model (including dead tree dbh and lignin concentration) explained even more variation in wood decomposition rates (R2 = 0.71), underlining the importance of dbh in wood decomposition. Other traits, including wood density, wood anatomical traits, macronutrient concentrations, and the amount of phenolic extractives could not significantly explain the variation in wood decomposition rates. The surprising results of this multi-species study, in which for the first time a large set of traits is explicitly linked to wood decomposition rates, merits further testing in other forest ecosystems.

ETE: a python Environment for Tree Exploration.

Science.gov (United States)

Huerta-Cepas, Jaime; Dopazo, Joaquín; Gabaldón, Toni

2010-01-13

Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relationships among different biological entities, thus facilitating their analysis and interpretation. A number of standalone programs are available that focus on tree visualization or that perform specific analyses on them. However, such applications are rarely suitable for large-scale surveys, in which a higher level of automation is required. Currently, many genome-wide analyses rely on tree-like data representation and hence there is a growing need for scalable tools to handle tree structures at large scale. Here we present the Environment for Tree Exploration (ETE), a python programming toolkit that assists in the automated manipulation, analysis and visualization of hierarchical trees. ETE libraries provide a broad set of tree handling options as well as specific methods to analyze phylogenetic and clustering trees. Among other features, ETE allows for the independent analysis of tree partitions, has support for the extended newick format, provides an integrated node annotation system and permits to link trees to external data such as multiple sequence alignments or numerical arrays. In addition, ETE implements a number of built-in analytical tools, including phylogeny-based orthology prediction and cluster validation techniques. Finally, ETE's programmable tree drawing engine can be used to automate the graphical rendering of trees with customized node-specific visualizations. ETE provides a complete set of methods to manipulate tree data structures that extends current functionality in other bioinformatic toolkits of a more general purpose. ETE is free software and can be downloaded from http://ete.cgenomics.org.

ETE: a python Environment for Tree Exploration

Directory of Open Access Journals (Sweden)

Gabaldón Toni

2010-01-01

Full Text Available Abstract Background Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relationships among different biological entities, thus facilitating their analysis and interpretation. A number of standalone programs are available that focus on tree visualization or that perform specific analyses on them. However, such applications are rarely suitable for large-scale surveys, in which a higher level of automation is required. Currently, many genome-wide analyses rely on tree-like data representation and hence there is a growing need for scalable tools to handle tree structures at large scale. Results Here we present the Environment for Tree Exploration (ETE, a python programming toolkit that assists in the automated manipulation, analysis and visualization of hierarchical trees. ETE libraries provide a broad set of tree handling options as well as specific methods to analyze phylogenetic and clustering trees. Among other features, ETE allows for the independent analysis of tree partitions, has support for the extended newick format, provides an integrated node annotation system and permits to link trees to external data such as multiple sequence alignments or numerical arrays. In addition, ETE implements a number of built-in analytical tools, including phylogeny-based orthology prediction and cluster validation techniques. Finally, ETE's programmable tree drawing engine can be used to automate the graphical rendering of trees with customized node-specific visualizations. Conclusions ETE provides a complete set of methods to manipulate tree data structures that extends current functionality in other bioinformatic toolkits of a more general purpose. ETE is free software and can be downloaded from http://ete.cgenomics.org.

Rare species support vulnerable functions in high-diversity ecosystems.

Science.gov (United States)

Mouillot, David; Bellwood, David R; Baraloto, Christopher; Chave, Jerome; Galzin, Rene; Harmelin-Vivien, Mireille; Kulbicki, Michel; Lavergne, Sebastien; Lavorel, Sandra; Mouquet, Nicolas; Paine, C E Timothy; Renaud, Julien; Thuiller, Wilfried

2013-01-01

Around the world, the human-induced collapses of populations and species have triggered a sixth mass extinction crisis, with rare species often being the first to disappear. Although the role of species diversity in the maintenance of ecosystem processes has been widely investigated, the role of rare species remains controversial. A critical issue is whether common species insure against the loss of functions supported by rare species. This issue is even more critical in species-rich ecosystems where high functional redundancy among species is likely and where it is thus often assumed that ecosystem functioning is buffered against species loss. Here, using extensive datasets of species occurrences and functional traits from three highly diverse ecosystems (846 coral reef fishes, 2,979 alpine plants, and 662 tropical trees), we demonstrate that the most distinct combinations of traits are supported predominantly by rare species both in terms of local abundance and regional occupancy. Moreover, species that have low functional redundancy and are likely to support the most vulnerable functions, with no other species carrying similar combinations of traits, are rarer than expected by chance in all three ecosystems. For instance, 63% and 98% of fish species that are likely to support highly vulnerable functions in coral reef ecosystems are locally and regionally rare, respectively. For alpine plants, 32% and 89% of such species are locally and regionally rare, respectively. Remarkably, 47% of fish species and 55% of tropical tree species that are likely to support highly vulnerable functions have only one individual per sample on average. Our results emphasize the importance of rare species conservation, even in highly diverse ecosystems, which are thought to exhibit high functional redundancy. Rare species offer more than aesthetic, cultural, or taxonomic diversity value; they disproportionately increase the potential breadth of functions provided by ecosystems across

Species and acoustic diversity of bats in a palaeotropical wet evergreen forest in southern India

OpenAIRE

Raghuram, H; Jain, M; Balakrishnan, R

2014-01-01

The Western Ghats of India is among the top 25 biodiversity hotspots in the world. About 43% of the reported 117 bat species in India are found in this region, but few quantitative studies of bat echolocation calls and diversity have been carried out here thus far. A quantitative study of bat diversity was therefore conducted using standard techniques, including mist-netting, acoustical and roost surveys in the wet evergreen forests of Kudremukh National Park in the Western Ghats of Karnataka...

Morphological and moisture availability controls of the leaf area-to-sapwood area ratio: analysis of measurements on Australian trees.

Science.gov (United States)

Togashi, Henrique Furstenau; Prentice, Iain Colin; Evans, Bradley John; Forrester, David Ian; Drake, Paul; Feikema, Paul; Brooksbank, Kim; Eamus, Derek; Taylor, Daniel

2015-03-01

The leaf area-to-sapwood area ratio (LA:SA) is a key plant trait that links photosynthesis to transpiration. The pipe model theory states that the sapwood cross-sectional area of a stem or branch at any point should scale isometrically with the area of leaves distal to that point. Optimization theory further suggests that LA:SA should decrease toward drier climates. Although acclimation of LA:SA to climate has been reported within species, much less is known about the scaling of this trait with climate among species. We compiled LA:SA measurements from 184 species of Australian evergreen angiosperm trees. The pipe model was broadly confirmed, based on measurements on branches and trunks of trees from one to 27 years old. Despite considerable scatter in LA:SA among species, quantile regression showed strong (0.2 < R1 < 0.65) positive relationships between two climatic moisture indices and the lowermost (5%) and uppermost (5-15%) quantiles of log LA:SA, suggesting that moisture availability constrains the envelope of minimum and maximum values of LA:SA typical for any given climate. Interspecific differences in plant hydraulic conductivity are probably responsible for the large scatter of values in the mid-quantile range and may be an important determinant of tree morphology.

CEPF Western Ghats Special Series: Metazoan community composition in tree hole aquatic habitats of Silent Valley National Park and New Amarambalam Reserve Forest of the Western Ghats, India

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K.A. Nishadh

2012-11-01

Full Text Available In a study of the metazoan community composition in tree hole aquatic habitat of a tropical rainforest, Silent Valley National Park, and the adjacent moist deciduous forest, New Amarambalam Reserve Forest, of the Western Ghats, 28 different species were recorded from 150 tree hole aquatic habitats with an average of 3-5 species per tree hole. Most of the recorded organisms (96.8% belong to Odonata (dragonflies and damselflies, Heteroptera (bugs, Diptera (flies, Coleoptera (beetles and Trichoptera (caddisflies. The study reports the first record of toe-winged beetle larvae (Ptilodactylidae in a tree hole aquatic habitat. The most significant observation is the prolific occurrence of trichopteran larvae as the second most abundant taxa in tree holes of Silent Valley National Park, and this stands as the first comprehensive record of the entire order in the habitat studied. The study upholds the importance of less explored microhabitats in the Western Ghats region in terms of sustaining unique community composition in the most delicate and extreme habitat conditions. It also puts forward important ecological research questions on biodiversity ecosystem functionality which could impart important lessons for managing and conserving the diminishing tropical evergreen forests which are significant for these unique habitats.

Filicium decipiens

Indian Academy of Sciences (India)

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Flowering Trees. Filicium decipiens (Wt. & Arn.) Thwaites ex. Hook.f. (Fern-leaf tree) of Sapindaceae is a handsome middle- sized evergreen native tree with a dense, often shapely crown. Leaves are alternate, pinnnately compound with a conspicuous leafy wing that runs along the entire length of the rachis. Flowers are ...

Impact of evergreening on patients and health insurance: a meta analysis and reimbursement cost analysis of citalopram/escitalopram antidepressants.

Science.gov (United States)

Alkhafaji, Ali A; Trinquart, Ludovic; Baron, Gabriel; Desvarieux, Moïse; Ravaud, Philippe

2012-11-20

"Evergreening" refers to the numerous strategies whereby owners of pharmaceutical products use patent laws and minor drug modifications to extend their monopoly privileges on the drug. We aimed to evaluate the impact of evergreening through the case study of the antidepressant citalopram and its chiral switch form escitalopram by evaluating treatment efficacy and acceptability for patients, as well as health insurance costs for society. To assess efficacy and acceptability, we performed meta-analyses for efficacy and acceptability. We compared direct evidence (meta-analysis of results of head-to-head trials) and indirect evidence (adjusted indirect comparison of results of placebo-controlled trials). To assess health insurance costs, we analyzed individual reimbursement data from a representative sample of the French National Health Insurance Inter-regime Information System (SNIIR-AM) from 2003 to 2010, which allowed for projecting these results to the whole SNIIR-AM population (53 million people). In the meta-analysis of seven head-to-head trials (2,174 patients), efficacy was significantly better for escitalopram than citalopram (combined odds ratio (OR) 1.60 (95% confidence interval 1.05 to 2.46)). However, for the adjusted indirect comparison of 10 citalopram and 12 escitalopram placebo-controlled trials, 2,984 and 3,777 patients respectively, efficacy was similar for the two drug forms (combined indirect OR 1.03 (0.82 to 1.30)). Because of the discrepancy, we could not combine direct and indirect data (test of inconsistency, P = 0.07). A similar discrepancy was found for treatment acceptability. The overall reimbursement cost burden for the citalopram, escitalopram and its generic forms was 120.6 million Euros in 2010, with 96.8 million Euros for escitalopram. The clinical benefit of escitalopram versus citalopram remains uncertain. In our case of evergreening, escitalopram represented a substantially high proportion of the overall reimbursement cost burden as

Distribution of radioactive Cesium in trees and effect of decontamination of forest contaminated by the Fukushima nuclear accident

International Nuclear Information System (INIS)

Iijima, K.; Funaki, H.; Tokizawa, T.; Nakayama, S.

2013-01-01

In decontamination pilot projects conducted by Japan Atomic Energy Agency (JAEA), many different techniques were tested to determine their applicability to remediate areas evacuated after the Fukushima Daiichi nuclear accident following the Great Tohoku earthquake and tsunami of March 11, 2011. In addition to buildings, roads and farmland, the forest adjacent to living areas was one of the main decontamination targets. The projects evaluated the radioactive contamination of trees and the effectiveness of decontaminating a highly contaminated evergreen forest. This forest was located 1.3 km southwest of the Fukushima Daiichi Nuclear Power Plant and is dominated by Japanese cedar trees and fir trees. As the first step, three Japanese cedar trees and three fir trees were cut down and the distributions of radioactive cesium (Cs) were measured in each. The total concentrations of 134 Cs and 137 Cs in the leaves and branches were about 1 MBq/kg for both cedar and fir trees, and were appreciably higher than in the bark for cedar. The concentrations in the outer part of the trunks (under the bark) were lower, on the order of 10 kBq/kg, and those in the core of the trunks were lower than 1 kBq/kg for both kinds of trees. The observation that the Cs concentrations are higher in the outer part of trees, is compatible with the assumption that radio-Cs was mostly adsorbed on the surface of trees and partly penetrated into the trunks through the bark. Evolution of air dose rates in a 100 x 60 m pasture adjacent to the forest was monitored during decontamination of the forest and of the pasture itself. The dose rates in the pasture decreased drastically after stripping contaminated topsoil from the pasture and decreased slightly more after stripping contaminated topsoil of the forest floor and pruning the trees. Cutting down and removing 84 trees in the outermost area (10- m width) of the forest also slightly decreased these dose rates. After decontamination, the residual dose

Uptake of small particles by tree canopies

International Nuclear Information System (INIS)

Belot, Y.; Camus, H.; Gauthier, D.; Caput, C.

1992-01-01

Most of the deposition data that are available to assess the radiological consequences of an accident have been acquired for low-growing vegetation and are inadapted to forest areas. Consequently, a programme was undertaken to study the deposition of particles on components of different trees and extrapolate the experimental data so obtained to large-scale canopies. The experiments were performed in a wind tunnel allowing canopy components to be exposed to a flow of suspended fluorescent particles of reasonably uniform size. Emphasis was put on particles in the 0.3-1.2 μm subrange, because most of the radioactive particles sampled at long distance from sources are comprised in this size interval. The uptake rates were determined for bare and leaf bearing twigs of several evergreen species (Picea abies, Pinus sylvestris and Quercus ilex), as a function of wind speed and particle size. The deposition rates obtained for the tree components were then used as input to a model that describes the uptake of particles by a large-scale canopy under specified conditions of weather and canopy structure. The model accounts for the diffusion of particles between different strata of the canopy, as well as deposition of particles on the canopy components. It calculates the rates of particle deposition to the horizontal surface of the canopy, and the repartition of the deposited particles within the canopy. Increases in wind speed cause increased deposition, but the effect is less important that it would have been for larger particles. The deposition is relatively insensitive to the size of particles within the subrange considered in this study. 13 refs., 2 figs., 1 tab

Effect of Tree Phenology on LiDAR Measurement of Mediterranean Forest Structure

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William Simonson

2018-04-01

Full Text Available Retrieval of forest biophysical properties using airborne LiDAR is known to differ between leaf-on and leaf-off states of deciduous trees, but much less is understood about the within-season effects of leafing phenology. Here, we compare two LiDAR surveys separated by just six weeks in spring, in order to assess whether LiDAR variables were influenced by canopy changes in Mediterranean mixed-oak woodlands at this time of year. Maximum and, to a slightly lesser extent, mean heights were consistently measured, whether for the evergreen cork oak (Quercus suber or semi-deciduous Algerian oak (Q. canariensis woodlands. Estimates of the standard deviation and skewness of height differed more strongly, especially for Algerian oaks which experienced considerable leaf expansion in the time period covered. Our demonstration of which variables are more or less affected by spring-time leafing phenology has important implications for analyses of both canopy and sub-canopy vegetation layers from LiDAR surveys.

Beyond Tree Throw: Wind, Water, Rock and the Mechanics of Tree-Driven Bedrock Physical Weathering

Science.gov (United States)

Marshall, J. A.; Anderson, R. S.; Dawson, T. E.; Dietrich, W. E.; Minear, J. T.

2017-12-01

Tree throw is often invoked as the dominant process in converting bedrock to soil and thus helping to build the Critical Zone (CZ). In addition, observations of tree roots lifting sidewalk slabs, occupying cracks, and prying slabs of rock from cliff faces have led to a general belief in the power of plant growth forces. These common observations have led to conceptual models with trees at the center of the soil genesis process. This is despite the observation that tree throw is rare in many forested settings, and a dearth of field measurements that quantify the magnitude of growth forces. While few trees blow down, every tree grows roots, inserting many tens of percent of its mass below ground. Yet we lack data quantifying the role of trees in both damaging bedrock and detaching it (and thus producing soil). By combing force measurements at the tree-bedrock interface with precipitation, solar radiation, wind speed, and wind-driven tree sway data we quantified the magnitude and frequency of tree-driven soil-production mechanisms from two contrasting climatic and lithologic regimes (Boulder and Eel Creek CZ Observatories). Preliminary data suggests that in settings with relatively thin soils, trees can damage and detach rock due to diurnal fluctuations, wind response and rainfall events. Surprisingly, our data suggests that forces from roots and trunks growing against bedrock are insufficient to pry rock apart or damage bedrock although much more work is needed in this area. The frequency, magnitude and style of wind-driven tree forces at the bedrock interface varies considerably from one to another species. This suggests that tree properties such as mass, elasticity, stiffness and branch structure determine whether trees respond to gusts big or small, move at the same frequency as large wind gusts, or are able to self-dampen near-ground sway response to extended wind forces. Our measurements of precipitation-driven and daily fluctuations in root pressures exerted on

Growth responses of trees and understory plants to nitrogen fertilization in a subtropical forest in China

Science.gov (United States)

Tian, Di; Li, Peng; Fang, Wenjing; Xu, Jun; Luo, Yongkai; Yan, Zhengbing; Zhu, Biao; Wang, Jingjing; Xu, Xiaoniu; Fang, Jingyun

2017-07-01

Reactive nitrogen (N) increase in the biosphere has been a noteworthy aspect of global change, producing considerable ecological effects on the functioning and dynamics of the terrestrial ecosystems. A number of observational studies have explored responses of plants to experimentally simulated N enrichment in boreal and temperate forests. Here we investigate how the dominant trees and different understory plants respond to experimental N enrichment in a subtropical forest in China. We conducted a 3.4-year N fertilization experiment in an old-aged subtropical evergreen broad-leaved forest in eastern China with three treatment levels applied to nine 20 m × 20 m plots and replicated in three blocks. We divided the plants into trees, saplings, shrubs (including tree seedlings), and ground-cover plants (ferns) according to the growth forms, and then measured the absolute and relative basal area increments of trees and saplings and the aboveground biomass of understory shrubs and ferns. We further grouped individuals of the dominant tree species, Castanopsis eyrei, into three size classes to investigate their respective growth responses to the N fertilization. Our results showed that the plot-averaged absolute and relative growth rates of basal area and aboveground biomass of trees were not affected by N fertilization. Across the individuals of C. eyrei, the small trees with a DBH (diameter at breast height) of 5-10 cm declined by 66.4 and 59.5 %, respectively, in N50 (50 kg N ha-1 yr-1) and N100 fertilized plots (100 kg N ha-1 yr-1), while the growth of median and large trees with a DBH of > 10 cm did not significantly change with the N fertilization. The growth rate of small trees, saplings, and the aboveground biomass of understory shrubs and ground-cover ferns decreased significantly in the N-fertilized plots. Our findings suggested that N might not be a limiting nutrient in this mature subtropical forest, and that the limitation of other nutrients in the forest

Growth responses of trees and understory plants to nitrogen fertilization in a subtropical forest in China

Directory of Open Access Journals (Sweden)

D. Tian

2017-07-01

Full Text Available Reactive nitrogen (N increase in the biosphere has been a noteworthy aspect of global change, producing considerable ecological effects on the functioning and dynamics of the terrestrial ecosystems. A number of observational studies have explored responses of plants to experimentally simulated N enrichment in boreal and temperate forests. Here we investigate how the dominant trees and different understory plants respond to experimental N enrichment in a subtropical forest in China. We conducted a 3.4-year N fertilization experiment in an old-aged subtropical evergreen broad-leaved forest in eastern China with three treatment levels applied to nine 20 m  ×  20 m plots and replicated in three blocks. We divided the plants into trees, saplings, shrubs (including tree seedlings, and ground-cover plants (ferns according to the growth forms, and then measured the absolute and relative basal area increments of trees and saplings and the aboveground biomass of understory shrubs and ferns. We further grouped individuals of the dominant tree species, Castanopsis eyrei, into three size classes to investigate their respective growth responses to the N fertilization. Our results showed that the plot-averaged absolute and relative growth rates of basal area and aboveground biomass of trees were not affected by N fertilization. Across the individuals of C. eyrei, the small trees with a DBH (diameter at breast height of 5–10 cm declined by 66.4 and 59.5 %, respectively, in N50 (50 kg N ha−1 yr−1 and N100 fertilized plots (100 kg N ha−1 yr−1, while the growth of median and large trees with a DBH of  >  10 cm did not significantly change with the N fertilization. The growth rate of small trees, saplings, and the aboveground biomass of understory shrubs and ground-cover ferns decreased significantly in the N-fertilized plots. Our findings suggested that N might not be a limiting nutrient in this mature subtropical

High-latitude tree growth and satellite vegetation indices: Correlations and trends in Russia and Canada (1982-2008)

Science.gov (United States)

Berner, Logan T.; Beck, Pieter S. A.; Bunn, Andrew G.; Lloyd, Andrea H.; Goetz, Scott J.

2011-03-01

Vegetation in northern high latitudes affects regional and global climate through energy partitioning and carbon storage. Spaceborne observations of vegetation, largely based on the normalized difference vegetation index (NDVI), suggest decreased productivity during recent decades in many regions of the Eurasian and North American boreal forests. To improve interpretation of NDVI trends over forest regions, we examined the relationship between NDVI from the advanced very high resolution radiometers and tree ring width measurements, a proxy of tree productivity. We collected tree core samples from spruce, pine, and larch at 22 sites in northeast Russia and northwest Canada. Annual growth rings were measured and used to generate site-level ring width index (RWI) chronologies. Correlation analysis was used to assess the association between RWI and summer NDVI from 1982 to 2008, while linear regression was used to examine trends in both measurements. The correlation between NDVI and RWI was highly variable across sites, though consistently positive (r = 0.43, SD = 0.19, n = 27). We observed significant temporal autocorrelation in both NDVI and RWI measurements at sites with evergreen conifers (spruce and pine), though weak autocorrelation at sites with deciduous conifers (larch). No sites exhibited a positive trend in both NDVI and RWI, although five sites showed negative trends in both measurements. While there are technological and physiological limitations to this approach, these findings demonstrate a positive association between NDVI and tree ring measurements, as well as the importance of considering lagged effects when modeling vegetation productivity using satellite data.

Physiological and morphological responses to permanent and intermittent waterlogging in seedlings of four evergreen trees of temperate swamp forests.

Science.gov (United States)

Zúñiga-Feest, Alejandra; Bustos-Salazar, Angela; Alves, Fernanda; Martinez, Vanessa; Smith-Ramírez, Cecilia

2017-06-01

Waterlogging decreases a plant's metabolism, stomatal conductance (gs) and photosynthetic rate (A); however, some evergreen species show acclimation to waterlogging. By studying both the physiological and morphological responses to waterlogging, the objective of this study was to assess the acclimation capacity of four swamp forest species that reside in different microhabitats. We proposed that species (Luma apiculata [D.C.] Burret. and Drimys winteri J.R. et G. Forster.) abundant in seasonally and intermittently waterlogged areas (SIWA) would have a higher acclimation capacity than species abundant in the inner swamp (Blepharocalyx cruckshanksii [H et A.] Mied. and Myrceugenia exsucca [D.C.] Berg.) where permanent waterlogging occurs (PWA); it was expected that the species from SIWA would maintain leaf expansion and gas exchange rates during intermittent waterlogging treatments. Conversely, we expected that PWA species would have higher constitutive waterlogging tolerance, and this would be reflected in the formation of lenticels and adventitious roots. Over the course of 2 months, we subjected seedlings to different waterlogging treatments: (i) permanent (sudden, SW), (ii) intermittent (gradual) or (iii) control (field capacity, C). Survival after waterlogging was high (≥80%) for all species and treatments, and only the growth rate of D. winteri subjected to SW was affected. Drimys winteri plants had low, but constant A and g during both waterlogging treatments. Conversely, L. apiculata had the highest A and g values, and g increased significantly during the first several days of waterlogging. In general, seedlings of all species subjected to waterlogging produced more adventitious roots and fully expanded leaves and had higher specific leaf area (SLA) and stomatal density (StD) than seedlings in the C treatment. From the results gathered here, we partially accept our hypothesis as all species showed high tolerance to waterlogging, maintained growth, and had

Responses of evergreen and deciduous Quercus species to enhanced ozone levels

International Nuclear Information System (INIS)

Calatayud, Vicent; Cervero, Julia; Calvo, Esperanza; Garcia-Breijo, Francisco-Jose; Reig-Arminana, Jose; Sanz, Maria Jose

2011-01-01

Plants of one evergreen oak (Quercus ilex) and three deciduous oaks (Q. faginea, with small leaves; Q. pyrenaica and Q. robur, with large leaves) were exposed both to filtered air and to enhanced ozone levels in Open-Top Chambers. Q. faginea and Q. pyrenaica were studied for the first time. Based on visible injury, gas exchange, chlorophyll content and biomass responses, Q. pyrenaica was the most sensitive species, and Q. ilex was the most tolerant, followed by Q. faginea. Functional leaf traits of the species were related to differences in sensitivity, while accumulated ozone flux via stomata (POD 1.6 ) partly contributed to the observed differences. For risk assessment of Mediterranean vegetation, the diversity of responses detected in this study should be taken into account, applying appropriate critical levels. - Ozone tolerance overlapped with leaf traits in four Quercus species.

Responses of evergreen and deciduous Quercus species to enhanced ozone levels

Energy Technology Data Exchange (ETDEWEB)

Calatayud, Vicent, E-mail: calatayud_viclor@gva.e [Instituto Universitario CEAM-UMH, Charles R. Darwin 14, Parc Tecnologic, 46980 Paterna, Valencia (Spain); Cervero, Julia; Calvo, Esperanza [Instituto Universitario CEAM-UMH, Charles R. Darwin 14, Parc Tecnologic, 46980 Paterna, Valencia (Spain); Garcia-Breijo, Francisco-Jose [Laboratorio de Anatomia e Histologia Vegetal ' Julio Iranzo' , Jardin Botanico, Universitat de Valencia, c/Quart 80, 46008 Valencia (Spain); Departamento de Ecosistemas Agroforestales, Escuela Tecnica Superior del Medio Rural y Enologia, Universidad Politecnica de Valencia, Avda. Blasco Ibanez 21, 46010 Valencia (Spain); Reig-Arminana, Jose [Departamento de Ecosistemas Agroforestales, Escuela Tecnica Superior del Medio Rural y Enologia, Universidad Politecnica de Valencia, Avda. Blasco Ibanez 21, 46010 Valencia (Spain); Sanz, Maria Jose [Instituto Universitario CEAM-UMH, Charles R. Darwin 14, Parc Tecnologic, 46980 Paterna, Valencia (Spain)

2011-01-15

Plants of one evergreen oak (Quercus ilex) and three deciduous oaks (Q. faginea, with small leaves; Q. pyrenaica and Q. robur, with large leaves) were exposed both to filtered air and to enhanced ozone levels in Open-Top Chambers. Q. faginea and Q. pyrenaica were studied for the first time. Based on visible injury, gas exchange, chlorophyll content and biomass responses, Q. pyrenaica was the most sensitive species, and Q. ilex was the most tolerant, followed by Q. faginea. Functional leaf traits of the species were related to differences in sensitivity, while accumulated ozone flux via stomata (POD{sub 1.6}) partly contributed to the observed differences. For risk assessment of Mediterranean vegetation, the diversity of responses detected in this study should be taken into account, applying appropriate critical levels. - Ozone tolerance overlapped with leaf traits in four Quercus species.

Estimating Resistance and Resilience of Military Lands Using Vegetation Indices

Science.gov (United States)

2017-05-17

considered more resistant to maneuver damage because they have flex- ible, horizontal, and branching stems , narrow leaves, below-ground repro- ductive... stems with reproductive capacity more elevated than the graminoids, which make them far more sensitive to maneuver training im- pacts (Tolvanen et...Tree- Evergreen 3.2 2.2 Southeast Florida Coastal Strand and Maritime Hammock Coccoloba uvifera Shrub- Evergreen 2.7 2.4 Southwest Florida Coastal

Rare species support vulnerable functions in high-diversity ecosystems.

Directory of Open Access Journals (Sweden)

David Mouillot

Full Text Available Around the world, the human-induced collapses of populations and species have triggered a sixth mass extinction crisis, with rare species often being the first to disappear. Although the role of species diversity in the maintenance of ecosystem processes has been widely investigated, the role of rare species remains controversial. A critical issue is whether common species insure against the loss of functions supported by rare species. This issue is even more critical in species-rich ecosystems where high functional redundancy among species is likely and where it is thus often assumed that ecosystem functioning is buffered against species loss. Here, using extensive datasets of species occurrences and functional traits from three highly diverse ecosystems (846 coral reef fishes, 2,979 alpine plants, and 662 tropical trees, we demonstrate that the most distinct combinations of traits are supported predominantly by rare species both in terms of local abundance and regional occupancy. Moreover, species that have low functional redundancy and are likely to support the most vulnerable functions, with no other species carrying similar combinations of traits, are rarer than expected by chance in all three ecosystems. For instance, 63% and 98% of fish species that are likely to support highly vulnerable functions in coral reef ecosystems are locally and regionally rare, respectively. For alpine plants, 32% and 89% of such species are locally and regionally rare, respectively. Remarkably, 47% of fish species and 55% of tropical tree species that are likely to support highly vulnerable functions have only one individual per sample on average. Our results emphasize the importance of rare species conservation, even in highly diverse ecosystems, which are thought to exhibit high functional redundancy. Rare species offer more than aesthetic, cultural, or taxonomic diversity value; they disproportionately increase the potential breadth of functions provided by

Long-term experimental warming, shading and nutrient addition affect the concentration of phenolic compounds in arctic-alpine deciduous and evergreen dwarf shrubs

DEFF Research Database (Denmark)

Hansen, Anja Hoff; Jonasson, Sven Evert; Michelsen, Anders

2006-01-01

-arctic, alpine ecosystem, we investigated the effects on carbon based secondary compounds (CBSC) and nitrogen in one dominant deciduous dwarf shrub, Salix herbacea × polaris and two dominant evergreen dwarf shrubs, Cassiope tetragona and Vaccinium vitis-idaea throughout one growing season. The main aims were...

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Indian Academy of Sciences (India)

The evergreen kokum tree found along the west coast of ... published in 1901, mentions that 13,000 trees were estimated to be cultivated in ... Five to eight large seeds ... Ayurveda, various parts of the tree like root, bark, fruit and seed oil are used for treating piles, sprue and abdominal disorders. ... It should therefore be pre-.

Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

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Lixin Chen

Full Text Available The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations.We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP. The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1 the influence of tree species and size on transpiration, and 2 the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH and tree canopy transpiration amount (E(c was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c at VPD = 1 kPa (G(cref and the G(c sensitivity to VPD (-dG(c/dlnVPD across studied species as well as under contrasting soil water and R(s conditions in the urban area.We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref.

Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

Science.gov (United States)

Chen, Lixin; Zhang, Zhiqiang; Ewers, Brent E

2012-01-01

The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations. We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP). The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1) the influence of tree species and size on transpiration, and 2) the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH) and tree canopy transpiration amount (E(c)) was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c) at VPD = 1 kPa (G(cref)) and the G(c) sensitivity to VPD (-dG(c)/dlnVPD) across studied species as well as under contrasting soil water and R(s) conditions in the urban area. We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref).

Dipterocarpaceae

NARCIS (Netherlands)

Ashton, P.S.; Arboretum, Arnold

1979-01-01

Small or large resinous usually evergreen trees, usually buttressed, and often (if large trees) with flaky or fissured bark. Some or most parts with a tomentum of fascicled hairs, or sometimes single hairs, unicellular or multicellular glandular hairs, or multicellular, short or long lobed or

Species Abundance in a Forest Community in South China: A Case of Poisson Lognormal Distribution

Institute of Scientific and Technical Information of China (English)

Zuo-Yun YIN; Hai REN; Qian-Mei ZHANG; Shao-Lin PENG; Qin-Feng GUO; Guo-Yi ZHOU

2005-01-01

Case studies on Poisson lognormal distribution of species abundance have been rare, especially in forest communities. We propose a numerical method to fit the Poisson lognormal to the species abundance data at an evergreen mixed forest in the Dinghushan Biosphere Reserve, South China. Plants in the tree, shrub and herb layers in 25 quadrats of 20 m×20 m, 5 m×5 m, and 1 m×1 m were surveyed. Results indicated that: (i) for each layer, the observed species abundance with a similarly small median, mode, and a variance larger than the mean was reverse J-shaped and followed well the zero-truncated Poisson lognormal;(ii) the coefficient of variation, skewness and kurtosis of abundance, and two Poisson lognormal parameters (σ andμ) for shrub layer were closer to those for the herb layer than those for the tree layer; and (iii) from the tree to the shrub to the herb layer, the σ and the coefficient of variation decreased, whereas diversity increased. We suggest that: (i) the species abundance distributions in the three layers reflects the overall community characteristics; (ii) the Poisson lognormal can describe the species abundance distribution in diverse communities with a few abundant species but many rare species; and (iii) 1/σ should be an alternative measure of diversity.

Photosynthetic pathway types of evergreen rosette plants (Liliaceae) of the Chihuahuan desert.

Science.gov (United States)

Kemp, Paul R; Gardetto, Pietra E

1982-11-01

Diurnal patterns of CO 2 exchange and titratable acidity were monitored in six species of evergreen rosette plants growing in controlled environment chambers and under outdoor environmental conditions. These patterns indicated that two of the species, Yucca baccata and Y. torreyi, were constituitive CAM plants while the other species, Y. elata, Y. campestris, Nolina microcarpa and Dasylirion wheeleri, were C 3 plants. The C 3 species did not exhibit CAM when grown in any of several different temperature, photoperiod, and moisture regimes. Both photosynthetic pathway types appear adapted to desert environments and all species show environmentally induced changes in their photosynthetic responses consistent with desert adaptation. The results of this study do not indicate that changes in the photosynthetic pathway type are an adaptation in any of these species.

Seasonal carbon storage and growth in Mediterranean tree seedlings under different water conditions.

Science.gov (United States)

Sanz-Pérez, Virginia; Castro-Díez, Pilar; Joffre, Richard

2009-09-01

In all Mediterranean-type ecosystems, evergreen and deciduous trees differing in wood anatomy, growth pattern and leaf habit coexist, suggesting distinct adaptative responses to environmental constraints. This study examined the effects of summer water stress on carbon (C) storage and growth in seedlings of three coexisting Mediterranean trees that differed in phenology and wood anatomy characteristics: Quercus ilex subsp. ballota (Desf.) Samp., Quercus faginea Lam. and Pinus halepensis L. Seedlings were subjected to two levels of watering during two consecutive summers and achieved a minimum of -0.5 and -2.5 MPa of predawn water potential in the control and water stress treatment, respectively. Both Quercus species concentrated their growth in the early growing season, demanding higher C in early spring but replenishing C-stores in autumn. These species allocated more biomass to roots, having larger belowground starch and lipid reserves. Quercus species differed in seasonal storage dynamics from P. halepensis. This species allocated most of its C to aboveground growth, which occurred gradually during the growing season, leading to fewer C-reserves. Soluble sugar and starch concentrations sharply declined in August in P. halepensis, probably because reserves support respiration demands as this species closed stomata earlier under water stress. Drought reduced growth of the three species, mainly in Q. faginea and P. halepensis, but not C-reserves, suggesting that growth under water stress conditions is not limited by C-availability.

Dense understory dwarf bamboo alters the retention of canopy tree seeds

Science.gov (United States)

Qian, Feng; Zhang, Tengda; Guo, Qinxue; Tao, Jianping

2016-05-01

Tree seed retention is thought to be an important factor in the process of forest community regeneration. Although dense understory dwarf bamboo has been considered to have serious negative effects on the regeneration of forest community species, little attention has been paid to the relationship between dwarf bamboo and seed retention. In a field experiment we manipulated the density of Fargesia decurvata, a common understory dwarf bamboo, to investigate the retention of seeds from five canopy tree species in an evergreen and deciduous broad-leaved mixed forest in Jinfoshan National Nature Reserve, SW China. We found that the median survival time and retention ratio of seeds increased with the increase in bamboo density. Fauna discriminately altered seed retention in bamboo groves of different densities. Arthropods reduced seed survival the most, and seeds removed decreased with increasing bamboo density. Birds removed or ate more seeds in groves of medium bamboo density and consumed fewer seeds in dense or sparse bamboo habitats. Rodents removed a greater number of large and highly profitable seeds in dense bamboo groves but more small and thin-husked seeds in sparse bamboo groves. Seed characteristics, including seed size, seed mass and seed profitability, were important factors affecting seed retention. The results suggested that dense understory dwarf bamboo not only increased seeds concealment and reduced the probability and speed of seed removal but also influenced the trade-off between predation and risk of animal predatory strategies, thereby impacting the quantity and composition of surviving seeds. Our results also indicated that dense understory dwarf bamboo and various seed characteristics can provide good opportunities for seed storage and seed germination and has a potential positive effect on canopy tree regeneration.

Land use change and forestry. Sector 5

International Nuclear Information System (INIS)

1994-01-01

The land use change and forestry considers the following sub-modules in calculating GHG emission by sources or removal by sinks: 1)- Sub-module changes in forestry and other woody biomass stocks. This sub-module has presented considerable difficulties in the data collection activity since no information or records are available at the institutional level. Therefore, the data derived represents a large degree of uncertainty.The stocks of woody biomass, needed to calculate the carbon uptake or storage in Lebanon for 1994, were found to be made of: - 75.000 ha of forest trees (65.000 evergreen and 10.000 deciduous) - 50.280.000 non-forest trees which includes: 49.794.000 farm and village trees (21.980.000 of evergreen fruit and olive trees and 27.814.000 of deciduous fruit trees) 486.000 urban trees (450.000 evergreen urban trees and 36.000 deciduous urban trees). The total carbon uptake increment by these stocks of woody biomass is 169.800475 Kt. The loss of biomass fuelwood consumption and from timber production is 4170298 Kt. As a result the change in woody biomass stocks is considered a source of CO 2 emitting 142.4446 Kt of CO 2 . 2)- Sub-module forest and grassland conversion CO 2 from biomass: Natural and man fires are included in this sub-module. In 1994, around 1300 ha of woodland were affected by fires and the resulting CO)? 2 released was 57.968625 Gg. Forests in 1994 constitute a minor source of CO 2 rather than a sink due to the loss of woody biomass sticks and to forest fires. CO 2 emission from and use change and forestry is 200.413225 Kt

Observations on arbuscular mycorrhiza associated with important edible tuberous plants grown in wet evergreen forest in Assam, India

Directory of Open Access Journals (Sweden)

RAJA RISHI

2013-10-01

Full Text Available Kumar R, Tapwal A, Pandey S, Rishi R, Borah D. 2013. Observations on arbuscular mycorrhiza associated with important edible tuberous plants grown in wet evergreen forest in Assam, India. Biodiversitas 14: 67-72. Non-timber forest products constitute an important source of livelihood for rural households from forest fringe communities across the world. Utilization of wild edible tuber plants is an integral component of their culture. Mycorrhizal associations influence the establishment and production of tuber plants under field conditions.The aim of present study is to explore the diversity and arbuscular mycorrhizal (AMF colonization of wild edible tuber plants grown in wet evergreen forest of Assam, India. A survey was conducted in 2009-10 in Sunaikuchi, Khulahat, and Bura Mayong reserved forest of Morigaon district of Assam to determine the AMF spore population in rhizosphere soils and root colonization of 14 tuberous edible plants belonging to five families. The results revealed AMF colonization of all selected species in all seasons. The percent colonization and spore count was less in summer, moderate in winter and highest in rainy season. Seventeen species of arbuscular mycorrhizal fungi were recorded in four genera viz. Acaulospora (7 species, Glomus (5 species, Sclerocystis (3 species and Gigaspora (2 species.

Species collapse via hybridization in Darwin's tree finches.

Science.gov (United States)

Kleindorfer, Sonia; O'Connor, Jody A; Dudaniec, Rachael Y; Myers, Steven A; Robertson, Jeremy; Sulloway, Frank J

2014-03-01

Species hybridization can lead to fitness costs, species collapse, and novel evolutionary trajectories in changing environments. Hybridization is predicted to be more common when environmental conditions change rapidly. Here, we test patterns of hybridization in three sympatric tree finch species (small tree finch Camarhynchus parvulus, medium tree finch Camarhynchus pauper, and large tree finch: Camarhynchus psittacula) that are currently recognized on Floreana Island, Galápagos Archipelago. Genetic analysis of microsatellite data from contemporary samples showed two genetic populations and one hybrid cluster in both 2005 and 2010; hybrid individuals were derived from genetic population 1 (small morph) and genetic population 2 (large morph). Females of the large and rare species were more likely to pair with males of the small common species. Finch populations differed in morphology in 1852-1906 compared with 2005/2010. An unsupervised clustering method showed (a) support for three morphological clusters in the historical tree finch sample (1852-1906), which is consistent with current species recognition; (b) support for two or three morphological clusters in 2005 with some (19%) hybridization; and (c) support for just two morphological clusters in 2010 with frequent (41%) hybridization. We discuss these findings in relation to species demarcations of Camarhynchus tree finches on Floreana Island.

Reproductivity and phenology of argan (argania spinosa (L.) skeels) a rare tree endemic to the west of algeria

International Nuclear Information System (INIS)

Benaouf, Z.; Arabi, Z.; Miloudi, A.; Souidi, Z.

2015-01-01

Argania spinosa in its ecological interest is threefold: forest, forage and fruit (oil production). The regeneration of the argan tree, it is important to know the phenology of this species. The study of phenology helps to know precisely the periods of activity of vegetation for productivity measures (Embryogenesis of the pollen grain, pollen deposition, pollen adhesion, fluorescence microscopy of pollen tube growth and Pollen grain size). Our results on the study of the phenology of two taxa of Argania spinosa (Mascara taxa and Mostaganem taxa), Regarding the phenological behavior of the argan under the effect of environmental conditions, we can mention that some argan trees (of Oggaz and one of Stidia) are early trees bloom twice a year in October and in spring, the author trees are late trees manifest activity during periods of the year. Begin to bloom from February until spring, this period is characterized by the breakdown of flower buds and the appearance of flowers on the twigs of the previous year and those of the current year; the fall of their ripe fruit takes place in Jun of the following year. Argan trees wore two generations of fruit, fruit knotted this season and last season tied fruit maturing. The length of the cycle is detected 9 and 16 months, we believe that a time synchronization in the evolution of physiological behavior argan trees of the two stations with 90 percentage. (author)

Impact of evergreening on patients and health insurance: a meta analysis and reimbursement cost analysis of citalopram/escitalopram antidepressants

Directory of Open Access Journals (Sweden)

Alkhafaji Ali A

2012-11-01

Full Text Available Abstract Background "Evergreening" refers to the numerous strategies whereby owners of pharmaceutical products use patent laws and minor drug modifications to extend their monopoly privileges on the drug. We aimed to evaluate the impact of evergreening through the case study of the antidepressant citalopram and its chiral switch form escitalopram by evaluating treatment efficacy and acceptability for patients, as well as health insurance costs for society. Methods To assess efficacy and acceptability, we performed meta-analyses for efficacy and acceptability. We compared direct evidence (meta-analysis of results of head-to-head trials and indirect evidence (adjusted indirect comparison of results of placebo-controlled trials. To assess health insurance costs, we analyzed individual reimbursement data from a representative sample of the French National Health Insurance Inter-regime Information System (SNIIR-AM from 2003 to 2010, which allowed for projecting these results to the whole SNIIR-AM population (53 million people. Results In the meta-analysis of seven head-to-head trials (2,174 patients, efficacy was significantly better for escitalopram than citalopram (combined odds ratio (OR 1.60 (95% confidence interval 1.05 to 2.46. However, for the adjusted indirect comparison of 10 citalopram and 12 escitalopram placebo-controlled trials, 2,984 and 3,777 patients respectively, efficacy was similar for the two drug forms (combined indirect OR 1.03 (0.82 to 1.30. Because of the discrepancy, we could not combine direct and indirect data (test of inconsistency, P = 0.07. A similar discrepancy was found for treatment acceptability. The overall reimbursement cost burden for the citalopram, escitalopram and its generic forms was 120.6 million Euros in 2010, with 96.8 million Euros for escitalopram. Conclusions The clinical benefit of escitalopram versus citalopram remains uncertain. In our case of evergreening, escitalopram represented a substantially

Discovery of novel rare actinobacteria isolated from mangrove environments in the east coast of Peninsular Malaysia

OpenAIRE

Azman, Adzzie Shazleen

2017-01-01

Mangrove forest is a complex ecology and it refers to a group of tropical trees and shrubs that grows in the intertidal zone. It contains various microorganisms including rare actinobacteria that can produce bioactive compounds with interesting bioactivities. The goals of this research were to describe the taxonomic status of novel rare actinobacteria and to screen their bioactivity for antibacterial, neuroprotective and cytotoxic properties. Three rare actinobacteria strains namely MUSC 115T...

Autumn Algorithm-Computation of Hybridization Networks for Realistic Phylogenetic Trees.

Science.gov (United States)

Huson, Daniel H; Linz, Simone

2018-01-01

A minimum hybridization network is a rooted phylogenetic network that displays two given rooted phylogenetic trees using a minimum number of reticulations. Previous mathematical work on their calculation has usually assumed the input trees to be bifurcating, correctly rooted, or that they both contain the same taxa. These assumptions do not hold in biological studies and "realistic" trees have multifurcations, are difficult to root, and rarely contain the same taxa. We present a new algorithm for computing minimum hybridization networks for a given pair of "realistic" rooted phylogenetic trees. We also describe how the algorithm might be used to improve the rooting of the input trees. We introduce the concept of "autumn trees", a nice framework for the formulation of algorithms based on the mathematics of "maximum acyclic agreement forests". While the main computational problem is hard, the run-time depends mainly on how different the given input trees are. In biological studies, where the trees are reasonably similar, our parallel implementation performs well in practice. The algorithm is available in our open source program Dendroscope 3, providing a platform for biologists to explore rooted phylogenetic networks. We demonstrate the utility of the algorithm using several previously studied data sets.

Adaptive significance of root grafting in trees

Energy Technology Data Exchange (ETDEWEB)

Loehle, C.; Jones, R.

1988-12-31

Root grafting has long been observed in forest trees but the adaptive significance of this trait has not been fully explained. Various authors have proposed that root grafting between trees contributes to mechanical support by linking adjacent root systems. Keeley proposes that this trait would be of greatest advantage in swamps where soils provide poor mechanical support. He provides as evidence a greenhouse study of Nyssa sylvatica Marsh in which seedlings of swamp provenance formed between-individual root grafts more frequently than upland provenance seedlings. In agreement with this within-species study, Keeley observed that arid zone species rarely exhibit grafts. Keeley also demonstrated that vines graft less commonly than trees, and herbs never do. Since the need for mechanical support coincides with this trend, these data seem to support his model. In this paper, the authors explore the mechanisms and ecological significance of root grafting, leading to predictions of root grafting incidence. Some observations support and some contradict the mechanical support hypothesis.

The amount of parenchyma and living fibers affects storage of nonstructural carbohydrates in young stems and roots of temperate trees.

Science.gov (United States)

Plavcová, Lenka; Hoch, Günter; Morris, Hugh; Ghiasi, Sara; Jansen, Steven

2016-04-01

Concentrations of nonstructural carbohydrates (NSCs) are used as proxies for the net carbon balance of trees and as indicators of carbon starvation resulting from environmental stress. Woody organs are the largest NSC-storing compartments in forest ecosystems; therefore, it is essential to understand the factors that affect the size of this important storage pool. In wood, NSC are predominantly deposited in ray and axial parenchyma (RAP); however, direct links between nutrient storage and RAP anatomy have not yet been established. Here, we tested whether the NSC storage capacity of wood is influenced by the amount of RAP. We measured NSC concentrations and RAP fractions in root and stem sapwood of 12 temperate species sampled at the onset of winter dormancy and in stem sapwood of four tropical trees growing in an evergreen lowland rainforest. The patterns of starch distribution were visualized by staining with Lugol's solution. The concentration of NSCs in sapwood of temperate trees scales tightly with the amount of RAP and living fibers (LFs), with almost all RAP and LFs being densely packed with starch grains. In contrast, the tropical species had lower NSC concentrations despite their higher RAP and LFs fraction and had considerable interspecific differences in starch distribution. The differences in RAP and LFs abundance affect the ability of sapwood to store NSC in temperate trees, whereas a more diverse set of functions of RAP might be pronounced in species growing in a tropical environment with little seasonality. © 2016 Botanical Society of America.

Growth strategies of tropical tree species: disentangling light and size effects.

Directory of Open Access Journals (Sweden)

Nadja Rüger

Full Text Available An understanding of the drivers of tree growth at the species level is required to predict likely changes of carbon stocks and biodiversity when environmental conditions change. Especially in species-rich tropical forests, it is largely unknown how species differ in their response of growth to resource availability and individual size. We use a hierarchical bayesian approach to quantify the impact of light availability and tree diameter on growth of 274 woody species in a 50-ha long-term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of canopy density. The hierarchical bayesian approach allowed accounting for different sources of error, such as negative growth observations, and including rare species correctly weighted by their abundance. All species grew faster at higher light. Exponents of a power function relating growth to light were mostly between 0 and 1. This indicates that nearly all species exhibit a decelerating increase of growth with light. In contrast, estimated growth rates at standardized conditions (5 cm dbh, 5% light varied over a 9-fold range and reflect strong growth-strategy differentiation between the species. As a consequence, growth rankings of the species at low (2% and high light (20% were highly correlated. Rare species tended to grow faster and showed a greater sensitivity to light than abundant species. Overall, tree size was less important for growth than light and about half the species were predicted to grow faster in diameter when bigger or smaller, respectively. Together light availability and tree diameter only explained on average 12% of the variation in growth rates. Thus, other factors such as soil characteristics, herbivory, or pathogens may contribute considerably to shaping tree growth in the tropics.

Computer-assisted initial diagnosis of rare diseases

Directory of Open Access Journals (Sweden)

Rui Alves

2016-07-01

Full Text Available Introduction. Most documented rare diseases have genetic origin. Because of their low individual frequency, an initial diagnosis based on phenotypic symptoms is not always easy, as practitioners might never have been exposed to patients suffering from the relevant disease. It is thus important to develop tools that facilitate symptom-based initial diagnosis of rare diseases by clinicians. In this work we aimed at developing a computational approach to aid in that initial diagnosis. We also aimed at implementing this approach in a user friendly web prototype. We call this tool Rare Disease Discovery. Finally, we also aimed at testing the performance of the prototype. Methods. Rare Disease Discovery uses the publicly available ORPHANET data set of association between rare diseases and their symptoms to automatically predict the most likely rare diseases based on a patient’s symptoms. We apply the method to retrospectively diagnose a cohort of 187 rare disease patients with confirmed diagnosis. Subsequently we test the precision, sensitivity, and global performance of the system under different scenarios by running large scale Monte Carlo simulations. All settings account for situations where absent and/or unrelated symptoms are considered in the diagnosis. Results. We find that this expert system has high diagnostic precision (≥80% and sensitivity (≥99%, and is robust to both absent and unrelated symptoms. Discussion. The Rare Disease Discovery prediction engine appears to provide a fast and robust method for initial assisted differential diagnosis of rare diseases. We coupled this engine with a user-friendly web interface and it can be freely accessed at http://disease-discovery.udl.cat/. The code and most current database for the whole project can be downloaded from https://github.com/Wrrzag/DiseaseDiscovery/tree/no_classifiers.

Floristic-functional variation of tree component along an altitudinal gradient in araucaria forest areas, in Southern Brazil.

Science.gov (United States)

Soboleski, Vanessa F; Higuchi, Pedro; Silva, Ana Carolina DA; Silva, Mariele A F DA; Nunes, Amanda S; Loebens, Rodineli; Souza, Karine DE; Ferrari, Jheniffer; Lima, Carla L; Kilca, Ricardo V

2017-01-01

We aimed to investigate the taxonomic and functional variations of tree component of Araucaria Forest (AF) areas located along an altitudinal gradient (700, 900 and 1,600 m asl), in the southern region of Brazil. The functional traits determined were leaf area, specific leaf area, wood density, maximum potential height and dispersal syndromes and deciduousness. The data were analyzed through a functional and taxonomic dissimilarity dendrograms, community-weighted mean trait values, parametric and nonparametric tests, and Principal Component Analysis. The largest floristic-structural similarity was observed between the lower altitude areas (700 and 900 m asl), whose Bray-Curtis distance was 0.63. The area at 700 m asl was characterized by a predominance of deciduous and semi-deciduous species, with a high number of self- and wind-dispersed species, whereas the area at 1,600 m asl exhibited a predominance of animal-dispersed and evergreen species. It was also observed that there were significant variations for leaf traits, basic wood density and maximum potential height. Over all altitudinal gradient, the ordinations indicated that there was no evidence of functional differentiation among dispersal and deciduousness groups. In conclusion, the evaluated Araucaria Forest areas presented high floristic-functional variation of the tree component along the altitudinal gradient.

Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum ...

Indian Academy of Sciences (India)

Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum (English: yellow oleander; Hindi: Pili-. Kaner) of Apocynaceae is a small evergreen ornamental tree with strap-like simple leaves and funnel- shaped yellow flowers. Fruit is large with a single hard-shelled seed. Thevetia trees are largely cultivated in gardens ...

Efficacy of generic allometric equations for estimating biomass: a test in Japanese natural forests.

Science.gov (United States)

Ishihara, Masae I; Utsugi, Hajime; Tanouchi, Hiroyuki; Aiba, Masahiro; Kurokawa, Hiroko; Onoda, Yusuke; Nagano, Masahiro; Umehara, Toru; Ando, Makoto; Miyata, Rie; Hiura, Tsutom

2015-07-01

Accurate estimation of tree and forest biomass is key to evaluating forest ecosystem functions and the global carbon cycle. Allometric equations that estimate tree biomass from a set of predictors, such as stem diameter and tree height, are commonly used. Most allometric equations are site specific, usually developed from a small number of trees harvested in a small area, and are either species specific or ignore interspecific differences in allometry. Due to lack of site-specific allometries, local equations are often applied to sites for which they were not originally developed (foreign sites), sometimes leading to large errors in biomass estimates. In this study, we developed generic allometric equations for aboveground biomass and component (stem, branch, leaf, and root) biomass using large, compiled data sets of 1203 harvested trees belonging to 102 species (60 deciduous angiosperm, 32 evergreen angiosperm, and 10 evergreen gymnosperm species) from 70 boreal, temperate, and subtropical natural forests in Japan. The best generic equations provided better biomass estimates than did local equations that were applied to foreign sites. The best generic equations included explanatory variables that represent interspecific differences in allometry in addition to stem diameter, reducing error by 4-12% compared to the generic equations that did not include the interspecific difference. Different explanatory variables were selected for different components. For aboveground and stem biomass, the best generic equations had species-specific wood specific gravity as an explanatory variable. For branch, leaf, and root biomass, the best equations had functional types (deciduous angiosperm, evergreen angiosperm, and evergreen gymnosperm) instead of functional traits (wood specific gravity or leaf mass per area), suggesting importance of other traits in addition to these traits, such as canopy and root architecture. Inclusion of tree height in addition to stem diameter improved

Development of multi-functional streetscape green infrastructure using a performance index approach

International Nuclear Information System (INIS)

Tiwary, A.; Williams, I.D.; Heidrich, O.; Namdeo, A.; Bandaru, V.; Calfapietra, C.

2016-01-01

This paper presents a performance evaluation framework for streetscape vegetation. A performance index (PI) is conceived using the following seven traits, specific to the street environments – Pollution Flux Potential (PFP), Carbon Sequestration Potential (CSP), Thermal Comfort Potential (TCP), Noise Attenuation Potential (NAP), Biomass Energy Potential (BEP), Environmental Stress Tolerance (EST) and Crown Projection Factor (CPF). Its application is demonstrated through a case study using fifteen street vegetation species from the UK, utilising a combination of direct field measurements and inventoried literature data. Our results indicate greater preference to small-to-medium size trees and evergreen shrubs over larger trees for streetscaping. The proposed PI approach can be potentially applied two-fold: one, for evaluation of the performance of the existing street vegetation, facilitating the prospects for further improving them through management strategies and better species selection; two, for planning new streetscapes and multi-functional biomass as part of extending the green urban infrastructure. - Highlights: • A performance evaluation framework for streetscape vegetation is presented. • Seven traits, relevant to street vegetation, are included in a performance index (PI). • The PI approach is applied to quantify and rank fifteen street vegetation species. • Medium size trees and evergreen shrubs are found more favourable for streetscapes. • The PI offers a metric for developing sustainable streetscape green infrastructure. - A performance index is developed and applied to fifteen vegetation species indicating greater preference to medium size trees and evergreen shrubs for streetscaping.

Scientometrics of Forest Health and Tree Diseases: An Overview

Directory of Open Access Journals (Sweden)

Marco Pautasso

2016-01-01

Full Text Available Maintaining forest health is a worldwide challenge due to emerging tree diseases, shifts in climate conditions and other global change stressors. Research on forest health is thus accumulating rapidly, but there has been little use of scientometric approaches in forest pathology and dendrology. Scientometrics is the quantitative study of trends in the scientific literature. As with all tools, scientometrics needs to be used carefully (e.g., by checking findings in multiple databases and its results must be interpreted with caution. In this overview, we provide some examples of studies of patterns in the scientific literature related to forest health and tree pathogens. Whilst research on ash dieback has increased rapidly over the last years, papers mentioning the Waldsterben have become rare in the literature. As with human health and diseases, but in contrast to plant health and diseases, there are consistently more publications mentioning “tree health” than “tree disease,” possibly a consequence of the often holistic nature of forest pathology. Scientometric tools can help balance research attention towards understudied emerging risks to forest trees, as well as identify temporal trends in public interest in forests and their health.

26 CFR 1.263A-8 - Requirement to capitalize interest.

Science.gov (United States)

2010-04-01

...) Timber and evergreen trees that are more than 6 years old when severed from the roots, or (ii) Property..., fences, inherently permanent advertising displays, inherently permanent outdoor lighting facilities...

A semi-empirical model for predicting crown diameter of cedrela ...

African Journals Online (AJOL)

A semi-empirical model relating age and breast height has been developed to predict individual tree crown diameter for Cedrela odorata (L) plantation in the moist evergreen forest zones of Ghana. The model was based on field records of 269 trees, and could determine the crown cover dynamics, forecast time of canopy ...

Embryonal rhabdomyosarcoma of the biliary tree: a case report

International Nuclear Information System (INIS)

Oh, Jong Young; Nam, Kyung Jin; Choi, Jong Chul; Park, Byung Ho; Lee, Ki Nam; Chung, Duck Hwan

1995-01-01

Rhabdomyosarcoma are reportedly the most common soft tissue sarcoma occurring in childhood, but the biliary tree is a rare site of origin for this tumor. Recently we experienced a case of embryonal rhabdomyosarcoma of the biliary tree in a 30-month-old child. Ultrasonography showed hypoechoic mass filling the dilated left intrahepatic and extrahepatic bile ducts, and CT showed hypodense mass with heterogeneous enhancement after contrast infusion. Intraoperative cholangiography showed filling defects within the dilated left intrahepatic and extrahepatic bile ducts. Postoperative MRI showed residual mass within the left intrahepatic duct which was hypointense on T1WI and hyperintense on T2WI

Regional variation in Caribbean dry forest tree species composition

Science.gov (United States)

Janet Franklin; Julie Ripplinger; Ethan H. Freid; Humfredo Marcano-Vega; David W. Steadman

2015-01-01

How does tree species composition vary in relation to geographical and environmental gradients in a globally rare tropical/subtropical broadleaf dry forest community in the Caribbean? We analyzed data from 153 Forest Inventory and Analysis (FIA) plots from Puerto Rico and the U.S. Virgin Islands (USVI), along with 42 plots that we sampled in the Bahamian Archipelago (...

[A comparative study on soil fauna in native secondary evergreen broad-leaved forest and Chinese fir plantation forests in subtropics].

Science.gov (United States)

Yan, Shaokui; Wang, Silong; Hu, Yalin; Gao, Hong; Zhang, Xiuyong

2004-10-01

In this study, we investigated the response of soil animal communities to the replacement of native secondary forest by Chinese fir plantation forest and successive rotation of Chinese fir in subtropics. Three adjacent forest stands, i.e., native secondary evergreen broad-leaved forest stand (control) and Chinese fir plantation stands of first (20 yr) and second (20 yr) rotations were selected for the comparison of soil fauna. All animals were extracted from the floor litter and 0-15 cm soil layer of the stands in Summer, 2003 by using Tullgren method, wet funnel method and hand-sorting method. Compared to two Chinese fir plantation forests, the native secondary evergreen broad-leaved forest had a higher abundance and a higher taxonomic diversity of animals in soil and litter, but there were no significant differences in the biomass and productivity of soil fauna between all study stands. The abundance or diversity did not differ significantly between the first rotation and second rotation stands, too. The results supported that vegetation cover might be one of the main forces driving the development of soil animal communities, and the effect of successive rotation of Chinese fir on the development of soil fauna was a slow-running process.

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Indian Academy of Sciences (India)

ART

hogany) of Meliaceae is a large handsome evergreen tree with a dense spreading crown. Leaves are compound, alternate with large leaflets. Flowers are a cm long, fragrant and borne on large drooping terminal clusters. They are unisexual, both male and female flowers appearing on the same tree. Fruit is 2-3 cm long and ...

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Indian Academy of Sciences (India)

user

(Fiddlewood) of Verbenaceae is a fast-growing moderate size tree. Whereas the tree is evergreen in tropics, it sheds half the foliage in cooler areas. The leaves are simple and lush green. Young leaves turn an unusual salmon-orange colour. Creamy white sprays of small fra- grant flowers appear at the branch ends in ...

Effects of vibration on stone pine trees (Pinus pinea L.) on the vigor of the trees: crown density, growth shoots and parasites of weak trees.; Efectos del vibrado del pino pinonero (Pinus pinea L.) en el vigor de los arboles: densidad de copa, crecimiento de guias y parasitos de debilidad

Energy Technology Data Exchange (ETDEWEB)

Martinez-Zurimendi, P.; Alvarez, J. M.; Pando, V.; Dominguez, M.; Gordo, J.; Finat, L.; Sierra-De-Grado, R.

2009-07-01

In the northwest of Spain the mechanized harvesting of pine cones is more and more frequent. In order to quantify the effects of vibration on the vigor of the trees, parcels of stone pine were planted in plateau and countryside. Both the mechanized and manual harvests were analyzed in adult and young trees. The growth of the tree shoots was measured. The presence and abundance of three insect plagues was analyzed in those same trees: Tacoma's piniperda, Rhyacionia buoliana and Thaumetopoea pityocampa. The average shoot length of those trees manually harvested was superior to that of those mechanically harvested. The difference was very significant in young trees (40-50 years old) in the countryside and in adult trees (more than 80 years) on the plateau. Rhyacionia buoliana was more abundant in adult trees that young trees, but the relation of its abundance with the harvest method was not seen. The presence of Tomicus piniperda was rare and was only detected in mechanically harvested stands. Thaumetopoea pityocampa was more frequent in trees harvested by hand than those harvested mechanically and was more abundant in young stands. The percentage tree of defoliation was low in all stands independent of harvest method. (Author) 45 refs.

EnviroAtlas - Acres of crops that have no nearby pollinator habitat for the Conterminous United States

Data.gov (United States)

U.S. Environmental Protection Agency — This dataset is a summary of crop acres without nearby pollinator habitat. Pollination habitat here is defined as trees (fruit, nut, deciduous, and evergreen). Crops...

Categorizing ideas about trees: a tree of trees.

Science.gov (United States)

Fisler, Marie; Lecointre, Guillaume

2013-01-01

The aim of this study is to explore whether matrices and MP trees used to produce systematic categories of organisms could be useful to produce categories of ideas in history of science. We study the history of the use of trees in systematics to represent the diversity of life from 1766 to 1991. We apply to those ideas a method inspired from coding homologous parts of organisms. We discretize conceptual parts of ideas, writings and drawings about trees contained in 41 main writings; we detect shared parts among authors and code them into a 91-characters matrix and use a tree representation to show who shares what with whom. In other words, we propose a hierarchical representation of the shared ideas about trees among authors: this produces a "tree of trees." Then, we categorize schools of tree-representations. Classical schools like "cladists" and "pheneticists" are recovered but others are not: "gradists" are separated into two blocks, one of them being called here "grade theoreticians." We propose new interesting categories like the "buffonian school," the "metaphoricians," and those using "strictly genealogical classifications." We consider that networks are not useful to represent shared ideas at the present step of the study. A cladogram is made for showing who is sharing what with whom, but also heterobathmy and homoplasy of characters. The present cladogram is not modelling processes of transmission of ideas about trees, and here it is mostly used to test for proximity of ideas of the same age and for categorization.

Carbon dynamics in the deciduous broadleaf tree Erman's birch (Betula ermanii) at the subalpine treeline on Changbai Mountain, Northeast China.

Science.gov (United States)

Wang, Qing-Wei; Qi, Lin; Zhou, Wangming; Liu, Cheng-Gang; Yu, Dapao; Dai, Limin

2018-01-01

The growth limitation hypothesis (GLH) and carbon limitation hypothesis (CLH) are two dominant explanations for treeline formation. The GLH proposes that low temperature drives the treeline through constraining C sinks more than C sources, and it predicts that non-structural carbohydrate (NSC) levels are static or increase with elevation. Although the GLH has received strong support globally for evergreen treelines, there is still no consensus for deciduous treelines, which experience great asynchrony between supply and demand throughout the year. We investigated growth and the growing-season C dynamics in a common deciduous species, Erman's birch (Betula ermanii), along an elevational gradient from the closed forest to the treeline on Changbai Mountain, Northeast China. Samples were collected from developing organs (leaves and twigs) and main storage organs (stems and roots) for NSC analysis. Tree growth decreased with increasing elevation, and NSC concentrations differed significantly among elevations, organs, and sampling times. In particular, NSC levels varied slightly during the growing season in leaves, peaked in the middle of the growing season in twigs and stems, and increased continuously throughout the growing season in roots. NSCs also tended to increase or vary slightly in developing organs but decreased significantly in mature organs with increasing elevation. The decrease in NSCs with elevation in main storage organs indicates support for the CLH, while the increasing or static trends in new developing organs indicate support for the GLH. Our results suggest that the growth limitation theory may be less applicable to deciduous species' growth than to that of evergreen species. © 2018 Botanical Society of America.

The contribution of trees outside forests to national tree biomass and carbon stocks--a comparative study across three continents.

Science.gov (United States)

Schnell, Sebastian; Altrell, Dan; Ståhl, Göran; Kleinn, Christoph

2015-01-01

In contrast to forest trees, trees outside forests (TOF) often are not included in the national monitoring of tree resources. Consequently, data about this particular resource is rare, and available information is typically fragmented across the different institutions and stakeholders that deal with one or more of the various TOF types. Thus, even if information is available, it is difficult to aggregate data into overall national statistics. However, the National Forest Monitoring and Assessment (NFMA) programme of FAO offers a unique possibility to study TOF resources because TOF are integrated by default into the NFMA inventory design. We have analysed NFMA data from 11 countries across three continents. For six countries, we found that more than 10% of the national above-ground tree biomass was actually accumulated outside forests. The highest value (73%) was observed for Bangladesh (total forest cover 8.1%, average biomass per hectare in forest 33.4 t ha(-1)) and the lowest (3%) was observed for Zambia (total forest cover 63.9%, average biomass per hectare in forest 32 t ha(-1)). Average TOF biomass stocks were estimated to be smaller than 10 t ha(-1). However, given the large extent of non-forest areas, these stocks sum up to considerable quantities in many countries. There are good reasons to overcome sectoral boundaries and to extend national forest monitoring programmes on a more systematic basis that includes TOF. Such an approach, for example, would generate a more complete picture of the national tree biomass. In the context of climate change mitigation and adaptation, international climate mitigation programmes (e.g. Clean Development Mechanism and Reduced Emission from Deforestation and Degradation) focus on forest trees without considering the impact of TOF, a consideration this study finds crucial if accurate measurements of national tree biomass and carbon pools are required.

Some forest trees for honeydew honey production in Turkey

Directory of Open Access Journals (Sweden)

S. Ünal

2017-08-01

Full Text Available Honey is an important source of nutrients and energy and an effective remedy against various human diseases. Honeydew honey is produced from honeydew of phloem-feeders that honeybees gather. In this study, we focused on honeydew producers and diversity of host tree species which are involved in honeydew production in Turkey. A total of 24 honeydew producers by host tree species are identified in Turkey. Of these, 13 coniferous trees and 11 deciduous trees. The main honeydew producer in Turkey is a scale insect, Marchalina hellenica Gennadius (Hemiptera: Margarodidae living mainly on pines (Turkish red pine, Aleppo pine, and rarely on stone pine, Anatolian black pine and Scots pine. Honeydew producer insects can be treated as serious pests of conifer and broadleaf trees. The aphids and the scale insects such as Ceroplastes floridensis, Cinara cedri, C. laportei, Eulachnus rileyi, Icerya purchase, Kermes vermilio, Lichtensia viburni and Saissetia oleae are known as pests in several European, Asian and African countries. Despite their potential harm to their host plants, insect species producing honeydew play an important role in honey production in Turkey. Turkish honey production is exported to EU countries and, furthermore beekeeping is an important part of agricultural sector in Turkey.

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Indian Academy of Sciences (India)

System5

Castanospermum australe A.Cunn. & C.Fraser of the family Fabaceae is a moderate size evergreen tree distributed in the tropical forests of Australia, often planted as an avenue tree in tropics. Bark is brown to grayish-brown in colour with a smell of cucumber when cut. Leaf is pinnate with about. 6-8 pairs of lustrous-green ...

Ficus benghalensis L. also spelt as Ficus bengalensis (English ...

Indian Academy of Sciences (India)

Ficus benghalensis L. also spelt as Ficus bengalensis (English: Banyan; Hindi: Bargad) of Moraceae is a giant evergreen tree with spreading branches which are supported by aerial roots that go down into the soil to form the 'props'. (A banyan tree in Calcutta. Botanical Gardens has a main stem 45 feet in girth and its ...

Rare decays and CP asymmetries in charged B decays

International Nuclear Information System (INIS)

Deshpande, N.G.

1991-01-01

The theory of loop induced rare decays and the rate asymmetry due to CP violation in charged B Decays in reviewed. After considering b → sγ and b → se + e - decays, the asymmetries for pure penguin process are estimated first. A larger asymmetry can result in those modes where a tree diagram and a penguin diagram interfere, however these estimates are necessarily model dependent. Estimates of Cabbibo suppressed penguins are also considered

Little dragons prefer flowers to maidens: a lizard that laps nectar and pollinates trees

OpenAIRE

Sazima, Ivan; Sazima, Cristina; Sazima, Marlies

2005-01-01

Lizards rarely visit and pollinate flowers, the few recent records being mostly restricted to island habitats. We report here on the Noronha skink (Euprepis atlanticus) seeking nectar in the flowers of the leguminous mulungu tree (Erythrina velutina) at Fernando de Noronha Archipelago, off northeast Brazil. The mulungu tree blooms during the dry season, and each flower secretes copious and diluted nectar throughout the day. The Noronha skink climbs up to the inflorescences and laps the nectar...

Decoupled leaf and root carbon economics is a key component in the ecological diversity and evolutionary divergence of deciduous and evergreen lineages of genus Rhododendron.

Science.gov (United States)

Medeiros, Juliana S; Burns, Jean H; Nicholson, Jaynell; Rogers, Louisa; Valverde-Barrantes, Oscar

2017-06-01

We explored trait-trait and trait-climate relationships for 27 Rhododendron species while accounting for phylogenetic relationships and within-species variation to investigate whether leaf and root traits are coordinated across environments and over evolutionary time, as part of a whole-plant economics spectrum. We examined specific leaf area (SLA) and four root traits: specific root length (SRL), specific root tip abundance (SRTA), first order diameter, and link average length, for plants growing in a cold, seasonal climate (Kirtland, Ohio) and a warmer, less seasonal climate (Federal Way, Washington) in the United States. We estimated a phylogeny and species' climate of origin, determined phylogenetic signal on mean traits and within-species variation, and used phylogenetically informed analysis to compare trait-trait and trait-climate relationships for deciduous and evergreen lineages. Mean SLA and within-species variation in SRL were more similar between close relatives than expected by chance. SLA and root traits differed according to climate of origin and across growth environments, though SLA differed within- and among-species less than roots. A negative SRL-SRTA correlation indicates investment in foraging scale vs. precision as a fundamental trade-off defining the root economic spectrum. Also, the deciduous clade exhibited a strong negative relationship between SLA and SRL, while evergreen clades showed a weaker positive or no relationship. Our work suggests that natural selection has shaped relationships between above- and belowground traits in genus Rhododendron and that leaf and root traits may evolve independently. Morphological decoupling may help explain habitat diversity among Rhododendron species, as well as the changes accompanying the divergence of deciduous and evergreen lineages. © 2017 Botanical Society of America.

Radiocarbon Dating of an Olive Tree Cross-Section: New Insights on Growth Patterns and Implications for Age Estimation of Olive Trees

Directory of Open Access Journals (Sweden)

Yael Ehrlich

2017-11-01

Full Text Available The age of living massive olive trees is often assumed to be between hundreds and even thousands of years. These estimations are usually based on the girth of the trunk and an extrapolation based on a theoretical annual growth rate. It is difficult to objectively verify these claims, as a monumental tree may not be cut down for analysis of its cross-section. In addition, the inner and oldest part of the trunk in olive trees usually rots, precluding the possibility of carting out radiocarbon analysis of material from the first years of life of the tree. In this work we present a cross-section of an olive tree, previously estimated to be hundreds of years old, which was cut down post-mortem in 2013. The cross-section was radiocarbon dated at numerous points following the natural growth pattern, which was made possible to observe by viewing the entire cross-section. Annual growth rate values were calculated and compared between different radii. The cross-section also revealed a nearly independent segment of growth, which would clearly offset any estimations based solely on girth calculations. Multiple piths were identified, indicating the beginning of branching within the trunk. Different radii were found to have comparable growth rates, resulting in similar estimates dating the piths to the 19th century. The estimated age of the piths represent a terminus ante quem for the age of the tree, as these are piths of separate branches. However, the tree is likely not many years older than the dated piths, and certainly not centuries older. The oldest radiocarbon-datable material in this cross-section was less than 200 years old, which is in agreement with most other radiocarbon dates of internal wood from living olive trees, rarely older than 300 years.

Community patterns of tropical tree phenology derived from Unmanned Aerial Vehicle images: intra- and interspecific variation, association with species plant traits, and response to interannual climate variation

Science.gov (United States)

Bohlman, Stephanie; Rifai, Sami; Park, John; Dandois, Jonathan; Muller-Landau, Helene

2017-04-01

Phenology is a key life history trait of plant species and critical driver of ecosystem processes. There is strong evidence that phenology is shifting in temperate ecosystems in response to climate change, but tropical forest phenology remains poorly quantified and understood. A key challenge is that tropical forests contain hundreds of plant species with a wide variety of phenological patterns, which makes it difficult to collect sufficient ground-based field data to characterize individual tropical tree species phenologies. Satellite-based observations, an important source of phenology data in northern latitudes, are hindered by frequent cloud cover in the tropics. To quantify phenology over a large number of individuals and species, we collected bi-weekly images from unmanned aerial vehicles (UAVs) in the well-studied 50-ha forest inventory plot on Barro Colorado Island, Panama. The objective of this study is to quantify inter- and intra-specific responses of tropical tree leaf phenology to environmental variation over large spatial scales and identify key environmental variables and physiological mechanisms underpinning phenological variation. Between October 2014 and December 2015 and again in May 2015, we collected a total of 35 sets of UAV images, each with continuous coverage of the 50-ha plot, where every tree ≥ 1 cm DBH is mapped. UAV imagery was corrected for exposure, orthorectified, and then processed to extract spectral, texture, and image information for individual tree crowns, which was then used as inputs for a machine learning algorithm that successfully predicted the percentages of leaf, branch, and flower cover for each tree crown (r2=0.76 between observed and predicted percent branch cover for individual tree crowns). We then quantified cumulative annual deciduousness for each crown by fitting a non-parametric curve of flexible shape to its predicted percent branch time series and calculated the area under the curve. We obtained the species

Fog reduces transpiration in tree species of the Canarian relict heath-laurel cloud forest (Garajonay National Park, Spain).

Science.gov (United States)

Ritter, Axel; Regalado, Carlos M; Aschan, Guido

2009-04-01

The ecophysiologic role of fog in the evergreen heath-laurel 'laurisilva' cloud forests of the Canary Islands has not been unequivocally demonstrated, although it is generally assumed that fog water is important for the survival and the distribution of this relict paleoecosystem of the North Atlantic Macaronesian archipelagos. To determine the role of fog in this ecosystem, we combined direct transpiration measurements of heath-laurel tree species, obtained with Granier's heat dissipation probes, with micrometeorological and artificial fog collection measurements carried out in a 43.7-ha watershed located in the Garajonay National Park (La Gomera, Canary Islands, Spain) over a 10-month period. Median ambient temperature spanned from 7 to 15 degrees C under foggy conditions whereas higher values, ranging from 9 to 21 degrees C, were registered during fog-free periods. Additionally, during the periods when fog water was collected, global solar radiation values were linearly related (r2=0.831) to those under fog-free conditions, such that there was a 75+/-1% reduction in median radiation in response to fog. Fog events greatly reduced median diurnal tree transpiration, with rates about 30 times lower than that during fog-free conditions and approximating the nighttime rates in both species studied (the needle-like leaf Erica arborea L. and the broadleaf Myrica faya Ait.). This large decrease in transpiration in response to fog was independent of the time of the day, tree size and species and micrometeorological status, both when expressed on a median basis and in cumulative terms for the entire 10-month measuring period. We conclude that, in contrast to the turbulent deposition of fog water droplets on the heath-laurel species, which may be regarded as a localized hydrological phenomenon that is important for high-altitude wind-exposed E. arborea trees, the cooler, wetter and shaded microenvironment provided by the cloud immersion belt represents a large-scale effect

Coppice Woods and Pollard Trees in the Visual Arts

Directory of Open Access Journals (Sweden)

Lacina Jan

2016-11-01

Full Text Available The sprouting capacity of some broadleaves has been used for their regeneration since ancient times. Often concurrently with taking advantage of sprouting stools, the trees used to be shaped also by pruning their stems, namely on pasturelands and in grazing forests. The activity of woodcutters and shepherds was obviously rather common in warmer climates with broadleaved stands because coppice and pollard trees appear relatively often in the visual arts from ancient works through the period if the Italian and German Renaissance up to the romantic and realistic landscape painting of the 19th century overlapping into the 20th century. For centuries, most frequently illustrated in European and Czech paintings have been pollard willows (Salix spp.. Other coppice and pollard tree species identified in paintings are oaks (Quercus spp., hornbeam (Carpinus betulus, European beech (Fagus sylvatica, European chestnut (Castanea sativa, and rarely other species, too. Artists apparently often used bizarrely shaped woods to increase the dramatic atmosphere of their landscape sceneries as well as figural compositions, and the coppice and pollard trees had certainly also a symbolic meaning in some of their works.

Quantifying environmental limiting factors on tree cover using geospatial data.

Science.gov (United States)

Greenberg, Jonathan A; Santos, Maria J; Dobrowski, Solomon Z; Vanderbilt, Vern C; Ustin, Susan L

2015-01-01

Environmental limiting factors (ELFs) are the thresholds that determine the maximum or minimum biological response for a given suite of environmental conditions. We asked the following questions: 1) Can we detect ELFs on percent tree cover across the eastern slopes of the Lake Tahoe Basin, NV? 2) How are the ELFs distributed spatially? 3) To what extent are unmeasured environmental factors limiting tree cover? ELFs are difficult to quantify as they require significant sample sizes. We addressed this by using geospatial data over a relatively large spatial extent, where the wall-to-wall sampling ensures the inclusion of rare data points which define the minimum or maximum response to environmental factors. We tested mean temperature, minimum temperature, potential evapotranspiration (PET) and PET minus precipitation (PET-P) as potential limiting factors on percent tree cover. We found that the study area showed system-wide limitations on tree cover, and each of the factors showed evidence of being limiting on tree cover. However, only 1.2% of the total area appeared to be limited by the four (4) environmental factors, suggesting other unmeasured factors are limiting much of the tree cover in the study area. Where sites were near their theoretical maximum, non-forest sites (tree cover demand, and closed-canopy forests were not limited by any particular environmental factor. The detection of ELFs is necessary in order to fully understand the width of limitations that species experience within their geographic range.

Seasonal embolism and xylem vulnerability in deciduous and evergreen Mediterranean trees influenced by proximity to a carbon dioxide spring

Energy Technology Data Exchange (ETDEWEB)

Tognetti, R.; Raschi, A. [Consiglio Nazionale della Ricerche, Firenze (Italy); Longobucco, A. [Centro Studi per l`Informatica applicata all`Agricoltura, Firenze (Italy)

1999-04-01

The effect of proximity to natural CO{sub 2} springs on seasonal patterns of xylem embolism in various species of Quercus (oak), Fraxinus, Populus (poplar) and Arbutus was studied. Xylem embolism was evaluated in both artificially dehydrated branches and in hydrated apical branches collected at monthly intervals over a 20-month period. Species-dependent differences in xylem hydraulic properties in response to elevated CO{sub 2} were noted. Populus tremula was the most embolized, an Arbutus unedo was the least embolized among the species examined. The actual differences in xylem vulnerability between trees growing near the CO{sub 2} spring and those growing in control area were small, however, these differences combined with the interaction of seasonal stress events, may be of great importance in determining future community composition in Mediterranean forest ecosystems. Causes and ecological significance of such differences are discussed vis-a-vis elevated carbon dioxide concentration and other environmental factors. 48 refs., 2 tabs., 3 figs.

Radiocesium concentrations in the bark, sapwood and heartwood of three tree species collected at Fukushima forests half a year after the Fukushima Dai-ichi nuclear accident.

Science.gov (United States)

Kuroda, Katsushi; Kagawa, Akira; Tonosaki, Mario

2013-08-01

Radiocesium ((134)Cs and (137)Cs) distribution in tree stems of Japanese cedar (aged 40-56 y), red pine (42 y), and oak (42 y) grown in Fukushima Prefecture were investigated approximately half a year after the Fukushima Dai-ichi nuclear accident. Japanese cedar, red pine, and oak were selected from five sites, one site, and one site, respectively. Three trees at each site were felled, and bark, sapwood (the outer layer of wood in the stem), and heartwood (the inner layer of wood in the stem) separately collected to study radiocesium concentrations measured by gamma-ray spectrometry. The radiocesium deposition densities at the five sites were within the range of 16-1020 kBq m(-2). The radiocesium was distributed in bark, sapwood, and heartwood in three tree species, indicating that very rapid translocation of radiocesium into the wood. The concentration of radiocesium in oak (deciduous angiosperm) bark was higher than that in the bark of Japanese cedar and red pine (evergreen gymnosperms). Both sapwood and heartwood contained radiocesium, and the values were much lower than that in the bark samples. The results suggest that radiocesium contamination half a year after the accident was mainly attributable to the direct radioactive deposition. The radiocesium concentrations in the Japanese cedar samples taken from five sites rose with the density of radiocesium accumulation on the ground surface. To predict the future dynamics of radiocesium in tree stems, the present results taken half a year after the accident are important, and continuous study of radiocesium in tree stems is necessary. Copyright © 2013 Elsevier Ltd. All rights reserved.

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IKYAAGBA E

inventory approach which only tree species are ... Figure 1. Map of Cross River National Park Showing the Study Locations ..... evergreen rain forest with some semi-deciduous species (Tchouto et .... sourth- eastern Nigeria. ... Washington D.C..

Terrestrial Macrofungal Diversity from the Tropical Dry Evergreen Biome of Southern India and Its Potential Role in Aerobiology.

Science.gov (United States)

Priyamvada, Hema; Akila, M; Singh, Raj Kamal; Ravikrishna, R; Verma, R S; Philip, Ligy; Marathe, R R; Sahu, L K; Sudheer, K P; Gunthe, S S

2017-01-01

Macrofungi have long been investigated for various scientific purposes including their food and medicinal characteristics. Their role in aerobiology as a fraction of the primary biological aerosol particles (PBAPs), however, has been poorly studied. In this study, we present a source of macrofungi with two different but interdependent objectives: (i) to characterize the macrofungi from a tropical dry evergreen biome in southern India using advanced molecular techniques to enrich the database from this region, and (ii) to assess whether identified species of macrofungi are a potential source of atmospheric PBAPs. From the DNA analysis, we report the diversity of the terrestrial macrofungi from a tropical dry evergreen biome robustly supported by the statistical analyses for diversity conclusions. A total of 113 macrofungal species belonging to 54 genera and 23 families were recorded, with Basidiomycota and Ascomycota constituting 96% and 4% of the species, respectively. The highest species richness was found in the family Agaricaceae (25.3%) followed by Polyporaceae (15.3%) and Marasmiaceae (10.8%). The difference in the distribution of commonly observed macrofungal families over this location was compared with other locations in India (Karnataka, Kerala, Maharashtra, and West Bengal) using two statistical tests. The distributions of the terrestrial macrofungi were distinctly different in each ecosystem. We further attempted to demonstrate the potential role of terrestrial macrofungi as a source of PBAPs in ambient air. In our opinion, the findings from this ecosystem of India will enhance our understanding of the distribution, diversity, ecology, and biological prospects of terrestrial macrofungi as well as their potential to contribute to airborne fungal aerosols.

Stable Ca Isotopes in Tamarix aphylla Tree Rings, Death Valley, California

Science.gov (United States)

Yang, W.; Depaolo, D. J.; Ingram, B. L.; Owens, T. L.

2008-12-01

As a dune stabilizer and windbreak, Tamarix aphylla is an exotic perennial and evergreen tree in Death Valley. Its tap roots can reach down to 30 m depth and sub-superficial side roots may reach 50 m horizontally. The species can store large amounts of water in its roots and undergoes high evapotranspiration. Since Tamarix aphylla is a perennial tree growing in desert environments and its roots reach deep to the water table, it could be a proxy for desert ecological and hydrologic systems through time. We measured Ca isotopes in the soluble fraction of 8 tree ring samples from a 50-year-old specimen growing on an alluvial fan in Death Valley near Furnace Creek. Previous studies (Yang et al, GCA 60, 1996) indicate that this tree's rings contain high sulfur concentrations (4-6% expressed as sulfate) with chemical composition of CaSO4 (0.15-0.62 H2O). The δ34S values of soluble sulfate increase from +13.5 to +18 permil VCDT from the core to the bark, which are interpreted as reflecting deeper sulfate sources as the tree grew. The δ13C variations of the tree-ring cellulose (-27.6 to -24.0 permil VPDB) reflect changes in the local precipitation and show that Tamarix aphylla undergoes C3 photosynthesis. The δ44Ca for the soluble sulfate Ca through the tree-ring section, which covers a time period from 1945 to 1993, have an average value -2.52 permil (-3.4 permil relative to seawater). Only small variations are observed, from -2.69 to -2.28; the highest value (for 1990) occurs near the end of an extended drought. These are the first measurements of tree rings, but the low δ44Ca values are consistent with previous measurements of beech roots and stems from a temperate forest (Page et al., Biogeochem. 88, 2008). In our case, the tree has only one Ca source, which is expected to be isotopically uniform and similar to both local rainfall and limestones (δ44Ca ~ -0.6 permil), and with the minimal vegetation and extensive deep root system it is unlikely that there is a

Fingerprints of a forest fungus: Swiss needle cast, carbon isotopes, carbohydrates, and growth in Douglas-fir

Science.gov (United States)

Andrea Watts; Frederick Meinzer; Brandy J. Saffell

2014-01-01

Swiss needle cast is caused by a fungus native to the Pacific Northwest. Its host is Douglas-fir, an iconic evergreen tree in the region. The fungus does not kill its host, but it adversely affects the tree's growth. The fungal fruiting bodies block the stomata, small openings on the underside of the needle where carbon dioxide, water vapor, and other gases are...

Final Environmental Assessment for Aircraft Maintenance Operations Center

Science.gov (United States)

2014-06-01

lies within the Southern Mixed Forest Province that is typically characterized by forests of broadleaf deciduous and needleleaf evergreen trees ...virginiana), pin oak (Q. palustris), and southern magnolia (Magnolia grandiflora). Small tree and shrub species include the eastern red cedar, eastern ...this burden estimate or any other aspect of this collection of information, including suggestions for reducing this burden, to Washington

Mapping dry-season tree transpiration of an oak woodland at the catchment scale, using object-attributes derived from satellite imagery and sap flow measurements

NARCIS (Netherlands)

Reyes-Acosta, J.L.; Lubczynski, M.

2013-01-01

Tree transpiration is an important plant-physiological process that influences the water cycle, thereby influencing ecosystems and even the quantity of available water resources. However, direct tree-transpiration measurements, particularly at large spatial scales, are still rare, due to the

The C-household of young broad-leaved and conifer tree species exposed to long-term carbon limitation by shading

Science.gov (United States)

Weber, Raphael; Hoch, Günter

2017-04-01

Non-structural carbohydrates (NSC, i.e. free sugars and starch) are regarded as freely available carbon (C) reserves in plants. They are often quantified to estimate a plant's C-balance, assuming that NSC are controlled by the net-balance between photo-assimilation and C-usage (respiration, growth and other sinks). Within a recent field experiment, we investigated the extent, to which C-reserves (NSC) can be formed in young trees against prevailing C-sink demands (growth) under C-limitation. A total of almost 1000 individuals of two-year-old tree saplings from 6 deciduous, broadleaved species and 4 evergreen conifer species were planted on a field side. Half of the trees per species were treated with long-term C-limitation by exposing them to continuous deep shade conditions (5% of natural PPFD) under a permanent shading tent. C gas-exchange, growth and NSC tissue concentrations were analyzed in shaded and unshaded saplings for two consecutive years. Three months after the beginning of the experiment, leaf photosynthesis acclimatized to the low light conditions, with leaves of shaded trees showing significantly higher SLA and lower light saturation and maximum photosynthesis. During the second season of the experiment, most species exhibited very strong reductions in NSC, but much less pronounced reductions in growth. In contrast, other species, with few exceptions, kept NSC concentrations similar to unshaded controls, while growth virtually stopped under deep shade. In conclusion, we found species-specific strategies in the trees' C-household after two years of C-limitation, that fall into two major carbon allocation strategies: 1) "C-spenders", which deplete C reserves in order to keep up significant growth, and 2) "C-savers", which reduce C sink activities to a minimum in order to store substantial amounts of C reserves. Overall, early-successional species tended to follow the first strategy, while late-successional species tended to save higher C reserve pools

Genetic diversity of Santalum album using random amplified ...

African Journals Online (AJOL)

STORAGESEVER

2009-07-06

Jul 6, 2009 ... Santalum album is a parasitic, evergreen tree growing primarily in south Central India, in the dry .... (Adetula, 2006); Brassica (Divaret et al., 1999); lettuce ... associated with pollination in Santalum album Linn, In; Advances.

Ecological Importance of Large-Diameter Trees in a Temperate Mixed-Conifer Forest

Science.gov (United States)

Lutz, James A.; Larson, Andrew J.; Swanson, Mark E.; Freund, James A.

2012-01-01

Large-diameter trees dominate the structure, dynamics and function of many temperate and tropical forests. Although both scaling theory and competition theory make predictions about the relative composition and spatial patterns of large-diameter trees compared to smaller diameter trees, these predictions are rarely tested. We established a 25.6 ha permanent plot within which we tagged and mapped all trees ≥1 cm dbh, all snags ≥10 cm dbh, and all shrub patches ≥2 m2. We sampled downed woody debris, litter, and duff with line intercept transects. Aboveground live biomass of the 23 woody species was 507.9 Mg/ha, of which 503.8 Mg/ha was trees (SD = 114.3 Mg/ha) and 4.1 Mg/ha was shrubs. Aboveground live and dead biomass was 652.0 Mg/ha. Large-diameter trees comprised 1.4% of individuals but 49.4% of biomass, with biomass dominated by Abies concolor and Pinus lambertiana (93.0% of tree biomass). The large-diameter component dominated the biomass of snags (59.5%) and contributed significantly to that of woody debris (36.6%). Traditional scaling theory was not a good model for either the relationship between tree radii and tree abundance or tree biomass. Spatial patterning of large-diameter trees of the three most abundant species differed from that of small-diameter conspecifics. For A. concolor and P. lambertiana, as well as all trees pooled, large-diameter and small-diameter trees were spatially segregated through inter-tree distances trees and spatial relationships between large-diameter and small-diameter trees. Long-term observations may reveal regulation of forest biomass and spatial structure by fire, wind, pathogens, and insects in Sierra Nevada mixed-conifer forests. Sustaining ecosystem functions such as carbon storage or provision of specialist species habitat will likely require different management strategies when the functions are performed primarily by a few large trees as opposed to many smaller trees. PMID:22567132

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2013-01-01

We introduce a new compression scheme for labeled trees based on top trees [3]. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2015-01-01

We introduce a new compression scheme for labeled trees based on top trees. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

Wildfire and forest disease interaction lead to greater loss of soil nutrients and carbon.

Science.gov (United States)

Cobb, Richard C; Meentemeyer, Ross K; Rizzo, David M

2016-09-01

Fire and forest disease have significant ecological impacts, but the interactions of these two disturbances are rarely studied. We measured soil C, N, Ca, P, and pH in forests of the Big Sur region of California impacted by the exotic pathogen Phytophthora ramorum, cause of sudden oak death, and the 2008 Basin wildfire complex. In Big Sur, overstory tree mortality following P. ramorum invasion has been extensive in redwood and mixed evergreen forests, where the pathogen kills true oaks and tanoak (Notholithocarpus densiflorus). Sampling was conducted across a full-factorial combination of disease/no disease and burned/unburned conditions in both forest types. Forest floor organic matter and associated nutrients were greater in unburned redwood compared to unburned mixed evergreen forests. Post-fire element pools were similar between forest types, but lower in burned-invaded compared to burned-uninvaded plots. We found evidence disease-generated fuels led to increased loss of forest floor C, N, Ca, and P. The same effects were associated with lower %C and higher PO4-P in the mineral soil. Fire-disease interactions were linear functions of pre-fire host mortality which was similar between the forest types. Our analysis suggests that these effects increased forest floor C loss by as much as 24.4 and 21.3 % in redwood and mixed evergreen forests, respectively, with similar maximum losses for the other forest floor elements. Accumulation of sudden oak death generated fuels has potential to increase fire-related loss of soil nutrients at the region-scale of this disease and similar patterns are likely in other forests, where fire and disease overlap.

Quantifying environmental limiting factors on tree cover using geospatial data.

Directory of Open Access Journals (Sweden)

Jonathan A Greenberg

Full Text Available Environmental limiting factors (ELFs are the thresholds that determine the maximum or minimum biological response for a given suite of environmental conditions. We asked the following questions: 1 Can we detect ELFs on percent tree cover across the eastern slopes of the Lake Tahoe Basin, NV? 2 How are the ELFs distributed spatially? 3 To what extent are unmeasured environmental factors limiting tree cover? ELFs are difficult to quantify as they require significant sample sizes. We addressed this by using geospatial data over a relatively large spatial extent, where the wall-to-wall sampling ensures the inclusion of rare data points which define the minimum or maximum response to environmental factors. We tested mean temperature, minimum temperature, potential evapotranspiration (PET and PET minus precipitation (PET-P as potential limiting factors on percent tree cover. We found that the study area showed system-wide limitations on tree cover, and each of the factors showed evidence of being limiting on tree cover. However, only 1.2% of the total area appeared to be limited by the four (4 environmental factors, suggesting other unmeasured factors are limiting much of the tree cover in the study area. Where sites were near their theoretical maximum, non-forest sites (tree cover < 25% were primarily limited by cold mean temperatures, open-canopy forest sites (tree cover between 25% and 60% were primarily limited by evaporative demand, and closed-canopy forests were not limited by any particular environmental factor. The detection of ELFs is necessary in order to fully understand the width of limitations that species experience within their geographic range.

Nitrogen fixation in four dryland tree species in central Chile

International Nuclear Information System (INIS)

Ovalle, C.; Arredondo, S.; Aronson, J.; Longeri, L.; Avendano, J.

1998-01-01

Results are presented from a 5-year experiment using 15 N-enriched fertilizer to determine N 2 fixation in four tree species on degraded soils in a Mediterranean-climate region of central Chile in which there are 5 months of drought. Species tested included three slow-growing but long-lived savannah trees native to southers South America, (acacia caven, Prosopic alba and P. chilensis; Mimosoideae), and Tagasaste (Chamaecytisus proliferus ssp. palmensis; Papilonoideae), a fast-growing but medium-lived tree from the Canary Islands. Tagasaste produced four- to twenty-fold more biomass than the other species, but showed declining N 2 fixation and biomass accumulation during the 5th year, corresponding to the juvenile-to-adult developmental transition. Nitrogen content was significantly higher in Tagasaste and Acacia caven than in the other species. The data revealed inter-specific differences in resource allocation and phenology of N 2 fixation rarely detailed for woody plants in dryland regions. (author)

CARBON ISOTOPE DISCRIMINATION AND GROWTH RESPONSE TO STAND DENSITY REDUCTIONS IN OLD PINUS PONDEROSA TREES

Science.gov (United States)

Carbon isotope ratios ( 13C) of tree rings are commonly used for paleoclimatic reconstruction and for inferring canopy water-use efficiency (WUE). However, the responsiveness of carbon isotope discrimination ( ) to site disturbance and resource availability has only rarely been ...

Soil carbon and nitrogen mineralization under different tillage systems and Permanent Groundcover cultivation between Orange trees

Directory of Open Access Journals (Sweden)

Elcio Liborio Balota

2011-06-01

Full Text Available The objective of this work was to evaluate the alterations in carbon and nitrogen mineralization due to different soil tillage systems and groundcover species for intercropped orange trees. The experiment was established in an Ultisol soil (Typic Paleudults originated from Caiuá sandstone in northwestern of the state of Paraná, Brazil, in an area previously cultivated with pasture (Brachiaria humidicola. Two soil tillage systems were evaluated: conventional tillage (CT in the entire area and strip tillage (ST with a 2-m width, each with different groundcover vegetation management systems. The citrus cultivar utilized was the 'Pera' orange (Citrus sinensis grafted onto a 'Rangpur' lime rootstock. The soil samples were collected at a 0-15-cm depth after five years of experiment development. Samples were collected from under the tree canopy and from the inter-row space after the following treatments: (1 CT and annual cover crop with the leguminous Calopogonium mucunoides; (2 CT and perennial cover crop with the leguminous peanut Arachis pintoi; (3 CT and evergreen cover crop with Bahiagrass Paspalum notatum; (4 CT and cover crop with spontaneous B. humidicola grass vegetation; and (5 ST and maintenance of the remaining grass (pasture of B. humidicola. The soil tillage systems and different groundcover vegetation influenced the C and N mineralization, both under the tree canopy and in the inter-row space. The cultivation of B. humidicola under strip tillage provided higher potential mineralization than the other treatments in the inter-row space. Strip tillage increased the C and N mineralization compared to conventional tillage. The grass cultivation increased the C and N mineralization when compared to the others treatments cultivated in the inter-row space.

Generalising tree traversals and tree transformations to DAGs

DEFF Research Database (Denmark)

Bahr, Patrick; Axelsson, Emil

2017-01-01

We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead. The resul......We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead...... as the complementing theory with a number of examples....

Rare Presentation of Left Lower Lobe Pulmonary Artery Dissection

Directory of Open Access Journals (Sweden)

René Hako

2017-01-01

Full Text Available Background. Pulmonary arterial dissection with chronic pulmonary arterial hypertension as its major cause is a very rare but life-threatening condition. In most cases the main pulmonary trunk is the affected site usually without involvement of its branches. Segmental or lobar pulmonary artery dissection is extremely rare. Case Presentation. We report a unique case of left lower lobe pulmonary artery dissection in a 70-year-old male, with confirmed chronic pulmonary hypertension. To confirm dissection MDCT pulmonary angiography was used. Multiplanar reformation (MPR images in sagittal, coronal, oblique sagittal, and curved projections were generated. This case report presents morphologic CT features of rare chronic left lobar pulmonary artery dissection associated with chronic pulmonary hypertension at a place of localised pulmonary artery calcification. CT pulmonary angiography excluded signs of thromboembolism and potential motion or flow artefacts. Conclusion. To the best of our knowledge, no case of lower lobe pulmonary artery dissection with flap calcification has been reported yet. CT imaging of the chest is a key diagnostic tool that is able to detect an intimal flap and a false lumen within the pulmonary arterial tree and is preferred in differential diagnosis of rare complications of sustained pulmonary arterial hypertension.

Why abundant tropical tree species are phylogenetically old.

Science.gov (United States)

Wang, Shaopeng; Chen, Anping; Fang, Jingyun; Pacala, Stephen W

2013-10-01

Neutral models of species diversity predict patterns of abundance for communities in which all individuals are ecologically equivalent. These models were originally developed for Panamanian trees and successfully reproduce observed distributions of abundance. Neutral models also make macroevolutionary predictions that have rarely been evaluated or tested. Here we show that neutral models predict a humped or flat relationship between species age and population size. In contrast, ages and abundances of tree species in the Panamanian Canal watershed are found to be positively correlated, which falsifies the models. Speciation rates vary among phylogenetic lineages and are partially heritable from mother to daughter species. Variable speciation rates in an otherwise neutral model lead to a demographic advantage for species with low speciation rate. This demographic advantage results in a positive correlation between species age and abundance, as found in the Panamanian tropical forest community.

Large-scale pattern of genetic differentiation within African rainforest trees: insights on the roles of ecological gradients and past climate changes on the evolution of Erythrophleum spp (Fabaceae).

Science.gov (United States)

Duminil, Jerome; Brown, Richard P; Ewédjè, Eben-Ezer B K; Mardulyn, Patrick; Doucet, Jean-Louis; Hardy, Olivier J

2013-09-12

The evolutionary events that have shaped biodiversity patterns in the African rainforests are still poorly documented. Past forest fragmentation and ecological gradients have been advocated as important drivers of genetic differentiation but their respective roles remain unclear. Using nuclear microsatellites (nSSRs) and chloroplast non-coding sequences (pDNA), we characterised the spatial genetic structure of Erythrophleum (Fabaceae) forest trees in West and Central Africa (Guinea Region, GR). This widespread genus displays a wide ecological amplitude and taxonomists recognize two forest tree species, E. ivorense and E. suaveolens, which are difficult to distinguish in the field and often confused. Bayesian-clustering applied on nSSRs of a blind sample of 648 specimens identified three major gene pools showing no or very limited introgression. They present parapatric distributions correlated to rainfall gradients and forest types. One gene pool is restricted to coastal evergreen forests and corresponds to E. ivorense; a second one is found in gallery forests from the dry forest zone of West Africa and North-West Cameroon and corresponds to West-African E. suaveolens; the third gene pool occurs in semi-evergreen forests and corresponds to Central African E. suaveolens. These gene pools have mostly unique pDNA haplotypes but they do not form reciprocally monophyletic clades. Nevertheless, pDNA molecular dating indicates that the divergence between E. ivorense and Central African E. suaveolens predates the Pleistocene. Further Bayesian-clustering applied within each major gene pool identified diffuse genetic discontinuities (minor gene pools displaying substantial introgression) at a latitude between 0 and 2°N in Central Africa for both species, and at a longitude between 5° and 8°E for E. ivorense. Moreover, we detected evidence of past population declines which are consistent with historical habitat fragmentation induced by Pleistocene climate changes. Overall

Tree Growth Response to Drought Along a Depth to Groundwater Gradient in Northern Wisconsin

Science.gov (United States)

Ciruzzi, D. M.; Loheide, S. P., II

2017-12-01

Understanding complex spatial and temporal patterns of drought-induced forest stress requires knowledge of the physiological drivers and ecosystem attributes that lead to or inhibit tree mortality. Prevailing meteorological conditions leading to drought may have lesser effect on vegetation that has evolved to avoid drought by accessing deeper soil moisture reserves or shallow groundwater to meet evapotranspiration demand. This is especially true in arid and semi-arid regions, yet groundwater use by trees is rarely explored in temperate systems and the extent to which groundwater use reduces drought vulnerability in these climates and regions is unknown. We explored responses of radial growth in temperate tress to wet and dry years across a depth to groundwater gradient from 1 to 9 meters in sandy forests in northern Wisconsin. The spatial patterns of tree growth in this watershed show areas where tree growth is influenced by depth to groundwater. Preliminary results showed trees in areas of shallower groundwater with low variability in tree growth and indicated that tree growth remains consistent during both wet and dry years. Conversely, trees in areas of deeper groundwater showed higher variability in tree growth during wet and dry years. We hypothesize that even in this humid region, the sandy soils do not retain sufficient moisture leading to potentially frequent water stress in trees and reductions in productivity. However, where and when accessible, we suspect trees use shallow groundwater to sustain evapotranspiration and maintain consistent growth during dry periods.

Critical loads of nitrogen deposition and critical levels of atmospheric ammonia for semi-natural Mediterranean evergreen woodlands

Directory of Open Access Journals (Sweden)

P. Pinho

2012-03-01

Full Text Available Nitrogen (N has emerged in recent years as a key factor associated with global changes, with impacts on biodiversity, ecosystems functioning and human health. In order to ameliorate the effects of excessive N, safety thresholds such as critical loads (deposition fluxes and levels (concentrations can be established. Few studies have assessed these thresholds for semi-natural Mediterranean ecosystems. Our objective was therefore to determine the critical loads of N deposition and long-term critical levels of atmospheric ammonia for semi-natural Mediterranean evergreen woodlands. We have considered changes in epiphytic lichen communities, one of the most sensitive comunity indicators of excessive N in the atmosphere. Based on a classification of lichen species according to their tolerance to N we grouped species into response functional groups, which we used as a tool to determine the critical loads and levels. This was done for a Mediterranean climate in evergreen cork-oak woodlands, based on the relation between lichen functional diversity and modelled N deposition for critical loads and measured annual atmospheric ammonia concentrations for critical levels, evaluated downwind from a reduced N source (a cattle barn. Modelling the highly significant relationship between lichen functional groups and annual atmospheric ammonia concentration showed the critical level to be below 1.9 μg m⁻³, in agreement with recent studies for other ecosystems. Modelling the highly significant relationship between lichen functional groups and N deposition showed that the critical load was lower than 26 kg (N ha⁻¹ yr⁻¹, which is within the upper range established for other semi-natural ecosystems. Taking into account the high sensitivity of lichen communities to excessive N, these values should aid development of policies to protect Mediterranean woodlands from the initial effects of excessive N.

The Evergreen basin and the role of the Silver Creek fault in the San Andreas fault system, San Francisco Bay region, California

Science.gov (United States)

Jachens, Robert C.; Wentworth, Carl M.; Graymer, Russell W.; Williams, Robert; Ponce, David A.; Mankinen, Edward A.; Stephenson, William J.; Langenheim, Victoria

2017-01-01

The Evergreen basin is a 40-km-long, 8-km-wide Cenozoic sedimentary basin that lies mostly concealed beneath the northeastern margin of the Santa Clara Valley near the south end of San Francisco Bay (California, USA). The basin is bounded on the northeast by the strike-slip Hayward fault and an approximately parallel subsurface fault that is structurally overlain by a set of west-verging reverse-oblique faults which form the present-day southeastward extension of the Hayward fault. It is bounded on the southwest by the Silver Creek fault, a largely dormant or abandoned fault that splays from the active southern Calaveras fault. We propose that the Evergreen basin formed as a strike-slip pull-apart basin in the right step from the Silver Creek fault to the Hayward fault during a time when the Silver Creek fault served as a segment of the main route by which slip was transferred from the central California San Andreas fault to the Hayward and other East Bay faults. The dimensions and shape of the Evergreen basin, together with palinspastic reconstructions of geologic and geophysical features surrounding it, suggest that during its lifetime, the Silver Creek fault transferred a significant portion of the ∼100 km of total offset accommodated by the Hayward fault, and of the 175 km of total San Andreas system offset thought to have been accommodated by the entire East Bay fault system. As shown previously, at ca. 1.5–2.5 Ma the Hayward-Calaveras connection changed from a right-step, releasing regime to a left-step, restraining regime, with the consequent effective abandonment of the Silver Creek fault. This reorganization was, perhaps, preceded by development of the previously proposed basin-bisecting Mount Misery fault, a fault that directly linked the southern end of the Hayward fault with the southern Calaveras fault during extinction of pull-apart activity. Historic seismicity indicates that slip below a depth of 5 km is mostly transferred from the Calaveras

Surface tree languages and parallel derivation trees

NARCIS (Netherlands)

Engelfriet, Joost

1976-01-01

The surface tree languages obtained by top-down finite state transformation of monadic trees are exactly the frontier-preserving homomorphic images of sets of derivation trees of ETOL systems. The corresponding class of tree transformation languages is therefore equal to the class of ETOL languages.

Variations of right bronchial tree: a study with multi-detector CT.

Science.gov (United States)

Wang, Tao; Meng, Min; Huang, Min; Zhao, Xinya

2018-05-03

The aim was to display variations of right bronchial tree. The bronchial tree images of 238 patients were reconstructed using the postprocessing technique of CT. We revealed four cases rare bronchial branching patterns of right superior lobe. 1 case was referred to as tracheal bronchus. In 1 case, B1 was located in the place of the right superior lobar bronchus and B2 + 3 arose from the right merge of the IB. In 1 case, the right superior lobar bronchus has only two divisions for B1 and B3, and the bronchus B2 arose from the right merge of the IB. In 1 case, B1 branched into four bronchi. We revealed 15 cases of rare bronchial branching patterns of right inferior lobe. In nine cases, the basal trunk bronchus bifurcated into B7 + 8 and B9 + l0. In three cases, B8 branched from the basal trunk bronchus before B7. In two cases, basal trunk bronchus bifurcated into B7 + 8 + 9 and B10. In 1 case, the basal trunk bronchus bifurcated into the common stem of B7 + 10 and B8 + 9. Variations of right bronchial tree were displayed in the present study. This information may have important implications for diagnosis of symptomatic patients and performing certain procedures, including bronchoscopy, endotracheal intubation, and lung resection.

Effect of fall-applied nitrogen on growth, nitrogen storage, and frost hardiness of bareroot Larix olgensis seedlings

Science.gov (United States)

Guolei Li; Yong Liu; Yan Zhu; Qingmei Li; R. Kasten Dumroese

2012-01-01

Nursery response of evergreen trees to fall fertilization has been studied widely, but little attention has been given to deciduous trees. Bareroot Olga Bay larch (Larix olgensis Henry) seedlings were fertilized in the nursery with urea at four rates (0, 30, 60, 90 kg N ha-1), with half of each rate applied on two dates (September 16 and October 1, 2009). The seedlings...

TreePics: visualizing trees with pictures

Directory of Open Access Journals (Sweden)

Nicolas Puillandre

2017-09-01

Full Text Available While many programs are available to edit phylogenetic trees, associating pictures with branch tips in an efficient and automatic way is not an available option. Here, we present TreePics, a standalone software that uses a web browser to visualize phylogenetic trees in Newick format and that associates pictures (typically, pictures of the voucher specimens to the tip of each branch. Pictures are visualized as thumbnails and can be enlarged by a mouse rollover. Further, several pictures can be selected and displayed in a separate window for visual comparison. TreePics works either online or in a full standalone version, where it can display trees with several thousands of pictures (depending on the memory available. We argue that TreePics can be particularly useful in a preliminary stage of research, such as to quickly detect conflicts between a DNA-based phylogenetic tree and morphological variation, that may be due to contamination that needs to be removed prior to final analyses, or the presence of species complexes.

Multiple recruitment limitation causes arrested succession in mediterranean cork oak systems

NARCIS (Netherlands)

Acacio, Vanda; Holmgren, Milena; Jansen, Patrick A.; Schrotter, Ondrej

2007-01-01

Lack of tree regeneration and persistency of species-poor shrublands represent a growing problem across Mediterranean evergreen oak forests. What constrains forest regeneration is poorly understood, and restoration attempts have been largely unsuccessful. We assessed the contribution of four

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Indian Academy of Sciences (India)

branched evergreen shrub or small tree (6–7 m) with soft whitish-yellow wood. Branches are numerous and drooping. The leaves are elliptic-lanceolate and somewhat fleshy. Flowers are in loose axillary and terminal much-branched inflorescence, ...

Amino phenolics from the fruit of the argan tree Argania spinosa (Skeels L.).

Science.gov (United States)

Klika, D; Khallouki, Farid; Owen, Robert W

2014-01-01

A new phenolic-type compound containing a nitrogenous, heterocyclic-fused ring from the fruit of the argan tree, Argania spinosa (Skeels L.), is described. This and another already known compound also isolated in the course of the work belong to an obscure and rare class of natural products, the amino phenolics.

Endophytic Fungi of Various Medicinal Plants Collected From Evergreen Forest Baluran National Park and Its Potential as Laboratory Manual for Mycology Course

OpenAIRE

Murdiyah, Siti

2017-01-01

Endophytic fungi found on a variety of medicinal plants may express particular benefit. These fungi provide an alternative to overcome the progressive microbial resistance and as an effort to combat infectious diseases that became one of the leading causes of mortality. The main objective of this study was to isolate endophytic fungi from leaf samples of five medicinal plants species collected from evergreen forests Baluran National Park and its use as laboratory manual for Micology. Research...

TimeTree2: species divergence times on the iPhone.

Science.gov (United States)

Kumar, Sudhir; Hedges, S Blair

2011-07-15

Scientists, educators and the general public often need to know times of divergence between species. But they rarely can locate that information because it is buried in the scientific literature, usually in a format that is inaccessible to text search engines. We have developed a public knowledgebase that enables data-driven access to the collection of peer-reviewed publications in molecular evolution and phylogenetics that have reported estimates of time of divergence between species. Users can query the TimeTree resource by providing two names of organisms (common or scientific) that can correspond to species or groups of species. The current TimeTree web resource (TimeTree2) contains timetrees reported from molecular clock analyses in 910 published studies and 17 341 species that span the diversity of life. TimeTree2 interprets complex and hierarchical data from these studies for each user query, which can be launched using an iPhone application, in addition to the website. Published time estimates are now readily accessible to the scientific community, K-12 and college educators, and the general public, without requiring knowledge of evolutionary nomenclature. TimeTree2 is accessible from the URL http://www.timetree.org, with an iPhone app available from iTunes (http://itunes.apple.com/us/app/timetree/id372842500?mt=8) and a YouTube tutorial (http://www.youtube.com/watch?v=CxmshZQciwo).

Rare species contribute disproportionately to the functional structure of species assemblages.

Science.gov (United States)

Leitão, Rafael P; Zuanon, Jansen; Villéger, Sébastien; Williams, Stephen E; Baraloto, Christopher; Fortunel, Claire; Mendonça, Fernando P; Mouillot, David

2016-04-13

There is broad consensus that the diversity of functional traits within species assemblages drives several ecological processes. It is also widely recognized that rare species are the first to become extinct following human-induced disturbances. Surprisingly, however, the functional importance of rare species is still poorly understood, particularly in tropical species-rich assemblages where the majority of species are rare, and the rate of species extinction can be high. Here, we investigated the consequences of local and regional extinctions on the functional structure of species assemblages. We used three extensive datasets (stream fish from the Brazilian Amazon, rainforest trees from French Guiana, and birds from the Australian Wet Tropics) and built an integrative measure of species rarity versus commonness, combining local abundance, geographical range, and habitat breadth. Using different scenarios of species loss, we found a disproportionate impact of rare species extinction for the three groups, with significant reductions in levels of functional richness, specialization, and originality of assemblages, which may severely undermine the integrity of ecological processes. The whole breadth of functional abilities within species assemblages, which is disproportionately supported by rare species, is certainly critical in maintaining ecosystems particularly under the ongoing rapid environmental transitions. © 2016 The Author(s).

Seasonal ozone uptake by a warm-temperate mixed deciduous and evergreen broadleaf forest in western Japan estimated by the Penman–Monteith approach combined with a photosynthesis-dependent stomatal model

International Nuclear Information System (INIS)

Kitao, Mitsutoshi; Komatsu, Masabumi; Hoshika, Yasutomo; Yazaki, Kenichi; Yoshimura, Kenichi; Fujii, Saori; Miyama, Takafumi; Kominami, Yuji

2014-01-01

Canopy-level stomatal conductance over a warm-temperate mixed deciduous and evergreen broadleaf forest in Japan was estimated by the Penman–Monteith approach, as compensated by a semi-empirical photosynthesis-dependent stomatal model, where photosynthesis, relative humidity, and CO 2 concentration were assumed to regulate stomatal conductance. This approach, using eddy covariance data and routine meteorological observations at a flux tower site, permits the continuous estimation of canopy-level O 3 uptake, even when the Penman–Monteith approach is unavailable (i.e. in case of direct evaporation from soil or wet leaves). Distortion was observed between the AOT40 exposure index and O 3 uptake through stomata, as AOT40 peaked in April, but with O 3 uptake occurring in July. Thus, leaf pre-maturation in the predominant deciduous broadleaf tree species (Quercus serrata) might suppress O 3 uptake in springtime, even when the highest O 3 concentrations were observed. -- Highlights: • We estimate canopy-level O 3 uptake in a warm-temperate mixed forest in Japan. • The Penman–Monteith approach is compensated by a photosynthesis-dependent model. • Stomatal conductance can be estimated, even in a partly-opened or wet canopy. • The estimated O 3 dose peaks in summer though O 3 exposure peaks in spring. -- Estimation of seasonal O 3 uptake over a mixed-temperate forest compensated by a photosynthesis-dependent stomatal model

ColorTree: a batch customization tool for phylogenic trees.

Science.gov (United States)

Chen, Wei-Hua; Lercher, Martin J

2009-07-31

Genome sequencing projects and comparative genomics studies typically aim to trace the evolutionary history of large gene sets, often requiring human inspection of hundreds of phylogenetic trees. If trees are checked for compatibility with an explicit null hypothesis (e.g., the monophyly of certain groups), this daunting task is greatly facilitated by an appropriate coloring scheme. In this note, we introduce ColorTree, a simple yet powerful batch customization tool for phylogenic trees. Based on pattern matching rules, ColorTree applies a set of customizations to an input tree file, e.g., coloring labels or branches. The customized trees are saved to an output file, which can then be viewed and further edited by Dendroscope (a freely available tree viewer). ColorTree runs on any Perl installation as a stand-alone command line tool, and its application can thus be easily automated. This way, hundreds of phylogenic trees can be customized for easy visual inspection in a matter of minutes. ColorTree allows efficient and flexible visual customization of large tree sets through the application of a user-supplied configuration file to multiple tree files.

Predictive models for radial sap flux variation in coniferous, diffuse-porous and ring-porous temperate trees.

Science.gov (United States)

Berdanier, Aaron B; Miniat, Chelcy F; Clark, James S

2016-08-01

Accurately scaling sap flux observations to tree or stand levels requires accounting for variation in sap flux between wood types and by depth into the tree. However, existing models for radial variation in axial sap flux are rarely used because they are difficult to implement, there is uncertainty about their predictive ability and calibration measurements are often unavailable. Here we compare different models with a diverse sap flux data set to test the hypotheses that radial profiles differ by wood type and tree size. We show that radial variation in sap flux is dependent on wood type but independent of tree size for a range of temperate trees. The best-fitting model predicted out-of-sample sap flux observations and independent estimates of sapwood area with small errors, suggesting robustness in the new settings. We develop a method for predicting whole-tree water use with this model and include computer code for simple implementation in other studies. Published by Oxford University Press 2016. This work is written by (a) US Government employee(s) and is in the public domain in the US.

Tree Colors: Color Schemes for Tree-Structured Data.

Science.gov (United States)

Tennekes, Martijn; de Jonge, Edwin

2014-12-01

We present a method to map tree structures to colors from the Hue-Chroma-Luminance color model, which is known for its well balanced perceptual properties. The Tree Colors method can be tuned with several parameters, whose effect on the resulting color schemes is discussed in detail. We provide a free and open source implementation with sensible parameter defaults. Categorical data are very common in statistical graphics, and often these categories form a classification tree. We evaluate applying Tree Colors to tree structured data with a survey on a large group of users from a national statistical institute. Our user study suggests that Tree Colors are useful, not only for improving node-link diagrams, but also for unveiling tree structure in non-hierarchical visualizations.

TreePOD: Sensitivity-Aware Selection of Pareto-Optimal Decision Trees.

Science.gov (United States)

Muhlbacher, Thomas; Linhardt, Lorenz; Moller, Torsten; Piringer, Harald

2018-01-01

Balancing accuracy gains with other objectives such as interpretability is a key challenge when building decision trees. However, this process is difficult to automate because it involves know-how about the domain as well as the purpose of the model. This paper presents TreePOD, a new approach for sensitivity-aware model selection along trade-offs. TreePOD is based on exploring a large set of candidate trees generated by sampling the parameters of tree construction algorithms. Based on this set, visualizations of quantitative and qualitative tree aspects provide a comprehensive overview of possible tree characteristics. Along trade-offs between two objectives, TreePOD provides efficient selection guidance by focusing on Pareto-optimal tree candidates. TreePOD also conveys the sensitivities of tree characteristics on variations of selected parameters by extending the tree generation process with a full-factorial sampling. We demonstrate how TreePOD supports a variety of tasks involved in decision tree selection and describe its integration in a holistic workflow for building and selecting decision trees. For evaluation, we illustrate a case study for predicting critical power grid states, and we report qualitative feedback from domain experts in the energy sector. This feedback suggests that TreePOD enables users with and without statistical background a confident and efficient identification of suitable decision trees.

Detecting Inter-Annual Variations in the Phenology of Evergreen Conifers Using Long-Term MODIS Vegetation Index Time Series

Directory of Open Access Journals (Sweden)

Laura Ulsig

2017-01-01

Full Text Available Long-term observations of vegetation phenology can be used to monitor the response of terrestrial ecosystems to climate change. Satellite remote sensing provides the most efficient means to observe phenological events through time series analysis of vegetation indices such as the Normalized Difference Vegetation Index (NDVI. This study investigates the potential of a Photochemical Reflectance Index (PRI, which has been linked to vegetation light use efficiency, to improve the accuracy of MODIS-based estimates of phenology in an evergreen conifer forest. Timings of the start and end of the growing season (SGS and EGS were derived from a 13-year-long time series of PRI and NDVI based on a MAIAC (multi-angle implementation of atmospheric correction processed MODIS dataset and standard MODIS NDVI product data. The derived dates were validated with phenology estimates from ground-based flux tower measurements of ecosystem productivity. Significant correlations were found between the MAIAC time series and ground-estimated SGS (R2 = 0.36–0.8, which is remarkable since previous studies have found it difficult to observe inter-annual phenological variations in evergreen vegetation from satellite data. The considerably noisier NDVI product could not accurately predict SGS, and EGS could not be derived successfully from any of the time series. While the strongest relationship overall was found between SGS derived from the ground data and PRI, MAIAC NDVI exhibited high correlations with SGS more consistently (R2 > 0.6 in all cases. The results suggest that PRI can serve as an effective indicator of spring seasonal transitions, however, additional work is necessary to confirm the relationships observed and to further explore the usefulness of MODIS PRI for detecting phenology.

Carbon-14 in tree rings

International Nuclear Information System (INIS)

Cain, W.F.; Suess, H.E.

1976-01-01

In order to investigate how reliably the carbon 14 content of tree rings reflects that of atmospheric carbon dioxide, two types of determinations were carried out: (1) carbon 14 determinations in annual rings from the beginning of this century until 1974 and (2) carbon 14 determinations in synchronous wood from the North American bristlecone pine and from European oak trees, dendrochronologically dated to have grown in the third and fourth century B.C. The first series of measurements showed that bomb-produced radiocarbon was incorporated in wood at a time when it was converted from sapwood to heartwood, whenever radiocarbon from bomb testing was present in the atmosphere. The second series showed that wood more than 2000 years old and grown on two different continents at different altitudes had, within the limits of experimental error, the same radiocarbon content. This work and other experimental evidence, obtained in part by other laboratories, show that tree rings reflect the average radiocarbon content of global atmospheric carbon dioxide accurately within several parts per mil. In rare cases, deviations of up to 10 parts per thousand may be possible. This means that a typical single radiocarbon date for wood or charcoal possesses an intrinsic uncertainty (viz., an estimated ''one-sigma error'' in addition to all the other errors) of the order of +-50 years. This intrinsic uncertainty is independent of the absolute age of the sample. More accurate dates can, in principle, be obtained by the so-called method of ''wiggle matching.''

Estimation of above ground biomass by using multispectral data for Evergreen Forest in Phu Hin Rong Kla National Park, Thailand

International Nuclear Information System (INIS)

Suwanprasit, C.

2010-01-01

Tropical forest is the most important and largest source for stocking CO 2 from the atmosphere which might be one of the main sources of carbon emission, global warming and climate change in recent decades. There are two main objectives of this study. The first one is to establish a relationship between above ground biomass and vegetation indices and the other is to evaluate above ground biomass and carbon sequestration for evergreen forest areas in Phu Hin Rong Kla National park, Thailand. Random sampling design based was applied for calculating the above ground biomass at stand level in the selected area by using Brown and Tsutsumi allometric equations. Landsat 7 ETM+ data in February 2009 was used. Support Vector Machine (SVM) was applied for identifying evergreen forest area. Forty-three of vegetation indices and image transformations were used for finding the best correlation with forest stand biomass. Regression analysis was used to investigate the relationship between the biomass volume at stand level and digital data from the satellite image. TM51 which derived from Tsutsumi allometric equation was the highest correlation with stand biomass. Normalized Difference Vegetation Index (NDVI) was not the best correlation in this study. The best biomass estimation model was from TM51 and ND71 (R2 =0.658). The totals of above ground biomass and carbon sequestration were 112,062,010 ton and 56,031,005 ton respectively. The application of this study would be quite useful for understanding the terrestrial carbon dynamics and global climate change. (author)

The pristine rain forest? Remnants of historical human impacts on current tree species composition and diversity

NARCIS (Netherlands)

Gemerden, van B.S.; Olff, H.; Parren, M.P.E.; Bongers, F.J.J.M.

2003-01-01

Aim Tropical rain forests are often regarded as pristine and undisturbed by humans. In Central Africa, community-wide disturbances by natural causes are rare and therefore current theory predicts that natural gap phase dynamics structure tree species composition and diversity. However, the dominant

The pristine rain forest? Remnants of historical human impacts on current tree species composition and diversity

NARCIS (Netherlands)

Gemerden, Barend S. van; Olff, Han; Parren, Marc P.E.; Bongers, Frans

2003-01-01

Aim: Tropical rain forests are often regarded as pristine and undisturbed by humans. In Central Africa, community-wide disturbances by natural causes are rare and therefore current theory predicts that natural gap phase dynamics structure tree species composition and diversity. However, the dominant

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Indian Academy of Sciences (India)

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sized evergreen tree native to the Mollucas. Bark is brownish-red in colour; leaves are phyllodic (expanded petioles or stalk that serve as leaf) broad, smooth and elliptic with longitudinal nerves. Flowers are in spikes, clustered along the axils of the ...

Two Trees: Migrating Fault Trees to Decision Trees for Real Time Fault Detection on International Space Station

Science.gov (United States)

Lee, Charles; Alena, Richard L.; Robinson, Peter

2004-01-01

We started from ISS fault trees example to migrate to decision trees, presented a method to convert fault trees to decision trees. The method shows that the visualizations of root cause of fault are easier and the tree manipulating becomes more programmatic via available decision tree programs. The visualization of decision trees for the diagnostic shows a format of straight forward and easy understands. For ISS real time fault diagnostic, the status of the systems could be shown by mining the signals through the trees and see where it stops at. The other advantage to use decision trees is that the trees can learn the fault patterns and predict the future fault from the historic data. The learning is not only on the static data sets but also can be online, through accumulating the real time data sets, the decision trees can gain and store faults patterns in the trees and recognize them when they come.

Phylogenetic congruence between subtropical trees and their associated fungi.

Science.gov (United States)

Liu, Xubing; Liang, Minxia; Etienne, Rampal S; Gilbert, Gregory S; Yu, Shixiao

2016-12-01

Recent studies have detected phylogenetic signals in pathogen-host networks for both soil-borne and leaf-infecting fungi, suggesting that pathogenic fungi may track or coevolve with their preferred hosts. However, a phylogenetically concordant relationship between multiple hosts and multiple fungi in has rarely been investigated. Using next-generation high-throughput DNA sequencing techniques, we analyzed fungal taxa associated with diseased leaves, rotten seeds, and infected seedlings of subtropical trees. We compared the topologies of the phylogenetic trees of the soil and foliar fungi based on the internal transcribed spacer (ITS) region with the phylogeny of host tree species based on matK , rbcL , atpB, and 5.8S genes. We identified 37 foliar and 103 soil pathogenic fungi belonging to the Ascomycota and Basidiomycota phyla and detected significantly nonrandom host-fungus combinations, which clustered on both the fungus phylogeny and the host phylogeny. The explicit evidence of congruent phylogenies between tree hosts and their potential fungal pathogens suggests either diffuse coevolution among the plant-fungal interaction networks or that the distribution of fungal species tracked spatially associated hosts with phylogenetically conserved traits and habitat preferences. Phylogenetic conservatism in plant-fungal interactions within a local community promotes host and parasite specificity, which is integral to the important role of fungi in promoting species coexistence and maintaining biodiversity of forest communities.

Isolation and characterization of FLOWERING LOCUS T subforms and APETALA1 of the subtropical fruit tree Dimocarpus longan.

Science.gov (United States)

Winterhagen, Patrick; Tiyayon, Pimsiri; Samach, Alon; Hegele, Martin; Wünsche, Jens N

2013-10-01

Longan (Dimocarpus longan Lour.) is a subtropical evergreen fruit tree, mainly cultivated in Asia. Two putative floral integrator genes, D. longan FLOWERING LOCUS T1 and 2 (DlFT1 and DlFT2) were isolated and both translated sequences revealed a high homology to FT sequences from other plants. Moreover, two APETALA1-like (DlAP1-1 and DlAP1-2) sequences from longan were isolated and characterized. Results indicate that the sequences of these genes are highly conserved, suggesting functions in the longan flowering pathway. Ectopic expression of the longan genes in arabidopsis resulted in different flowering time phenotypes of transgenic plants. Expression experiments reveal a different action of the longan FT genes and indicate that DlFT1 is a flowering promoter, while DlFT2 acts as flowering inhibitor. Overexpression of longan AP1 genes in transgenic arabidopsis results in a range of flowering time phenotypes also including early and late flowering individuals. Copyright © 2013 Elsevier Masson SAS. All rights reserved.

Capturing spiral radial growth of conifers using the superellipse to model tree-ring geometric shape.

Science.gov (United States)

Shi, Pei-Jian; Huang, Jian-Guo; Hui, Cang; Grissino-Mayer, Henri D; Tardif, Jacques C; Zhai, Li-Hong; Wang, Fu-Sheng; Li, Bai-Lian

2015-01-01

Tree-rings are often assumed to approximate a circular shape when estimating forest productivity and carbon dynamics. However, tree rings are rarely, if ever, circular, thereby possibly resulting in under- or over-estimation in forest productivity and carbon sequestration. Given the crucial role played by tree ring data in assessing forest productivity and carbon storage within a context of global change, it is particularly important that mathematical models adequately render cross-sectional area increment derived from tree rings. We modeled the geometric shape of tree rings using the superellipse equation and checked its validation based on the theoretical simulation and six actual cross sections collected from three conifers. We found that the superellipse better describes the geometric shape of tree rings than the circle commonly used. We showed that a spiral growth trend exists on the radial section over time, which might be closely related to spiral grain along the longitudinal axis. The superellipse generally had higher accuracy than the circle in predicting the basal area increment, resulting in an improved estimate for the basal area. The superellipse may allow better assessing forest productivity and carbon storage in terrestrial forest ecosystems.

The Formation and Extinction of Fear Memory in Tree Shrews

Directory of Open Access Journals (Sweden)

Shujiang eShang

2015-07-01

Full Text Available Fear is an emotion that is well studied due to its importance for animal survival. Experimental animals, such as rats and mice, have been widely used to model fear. However, higher animals such as nonhuman primates have rarely been used to study fear due to ethical issues and high costs. Tree shrews are small mammals that are closely related to primates; they have been used to model human-related psychosocial conditions such as stress and alcohol tolerance. Here, we describe an experimental paradigm to study the formation and extinction of fear memory in tree shrews. We designed an experimental apparatus of a light/dark box with a voltage foot shock. We found that tree shrews preferred staying in the dark box in the daytime without stimulation and showed avoidance to voltage shocks applied to the footplate in a voltage-dependent manner. Foot shocks applied to the dark box for 5 days (10 minutes per day effectively reversed the light–dark preference of the tree shrews, and this memory lasted for more than 50 days without any sign of memory decay (extinction in the absence of further stimulation. However, this fear memory was reversed with 4 days of reverse training by applying the same stimulus to the light box. When reducing the stimulus intensity during the training period, a memory extinction and subsequently reinstatement effects were observed. Thus, our results describe an efficient method of monitoring fear memory formation and extinction in tree shrews.

Impacts of artificial reservoirs on floristic diversity and plant functional traits in dry forests after 15 years.

Science.gov (United States)

Lopes, S F; Vale, V S; Prado Júnior, J A; Schiavini, I

2015-08-01

Dams are of paramount importance to a wide variety of human services and many of their environmental problems are known; however, there are few studies in the world addressing the impacts on the native vegetation previously distant from water bodies which became close to the lakeshore created by a dam. Thus, this paper aims to analyze the responses of a dry forest to a dam after 15 years. For this, 20 random samples of 40 trees were made, 10 close to the lakeshore and 10 distant from it, by applying the central square point method. Close to the dam, we found higher values regarding basal area, number of trees, number of evergreen trees, and zoochoric syndrome, but there were lower values of Shannon's diversity index. Therefore, the impacts of the dam after 15 years caused several changes to the tree community. The greater basal area close to the dam suggests that water deficit during the dry season was decreased and plants have thicker trunks. On the other hand, this sector had much more zoochoric syndrome and a larger number of evergreen trees than plots which are distant from water, suggesting changes with regard to the community's ecological functions. Furthermore, structural floristic data shows that the sector close to the dam is less similar to other deciduous forests within the same geographical region than the sector distant from water, thus providing evidence of the impacts of dams on the tree community.

Impacts of artificial reservoirs on floristic diversity and plant functional traits in dry forests after 15 years

Directory of Open Access Journals (Sweden)

SF Lopes

Full Text Available AbstractDams are of paramount importance to a wide variety of human services and many of their environmental problems are known; however, there are few studies in the world addressing the impacts on the native vegetation previously distant from water bodies which became close to the lakeshore created by a dam. Thus, this paper aims to analyze the responses of a dry forest to a dam after 15 years. For this, 20 random samples of 40 trees were made, 10 close to the lakeshore and 10 distant from it, by applying the central square point method. Close to the dam, we found higher values regarding basal area, number of trees, number of evergreen trees, and zoochoric syndrome, but there were lower values of Shannon’s diversity index. Therefore, the impacts of the dam after 15 years caused several changes to the tree community. The greater basal area close to the dam suggests that water deficit during the dry season was decreased and plants have thicker trunks. On the other hand, this sector had much more zoochoric syndrome and a larger number of evergreen trees than plots which are distant from water, suggesting changes with regard to the community’s ecological functions. Furthermore, structural floristic data shows that the sector close to the dam is less similar to other deciduous forests within the same geographical region than the sector distant from water, thus providing evidence of the impacts of dams on the tree community.

The importance of chemosensory clues in Aguaruna tree classification and identification.

Science.gov (United States)

Jernigan, Kevin A

2008-05-03

The ethnobotanical literature still contains few detailed descriptions of the sensory criteria people use for judging membership in taxonomic categories. Olfactory criteria in particular have been explored very little. This paper will describe the importance of odor for woody plant taxonomy and identification among the Aguaruna Jívaro of the northern Peruvian Amazon, focusing on the Aguaruna category númi (trees excluding palms). Aguaruna informants almost always place trees that they consider to have a similar odor together as kumpají - 'companions,' a metaphor they use to describe trees that they consider to be related. The research took place in several Aguaruna communities in the upper Marañón region of the Peruvian Amazon. Structured interview data focus on informant criteria for membership in various folk taxa of trees. Informants were also asked to explain what members of each group of related companions had in common. This paper focuses on odor and taste criteria that came to light during these structured interviews. Botanical voucher specimens were collected, wherever possible. Of the 182 tree folk genera recorded in this study, 51 (28%) were widely considered to possess a distinctive odor. Thirty nine of those (76%) were said to have odors similar to some other tree, while the other 24% had unique odors. Aguaruna informants very rarely described tree odors in non-botanical terms. Taste was used mostly to describe trees with edible fruits. Trees judged to be related were nearly always in the same botanical family. The results of this study illustrate that odor of bark, sap, flowers, fruit and leaves are important clues that help the Aguaruna to judge the relatedness of trees found in their local environment. In contrast, taste appears to play a more limited role. The results suggest a more general ethnobotanical hypothesis that could be tested in other cultural settings: people tend to consider plants with similar odors to be related, but say that

The importance of chemosensory clues in Aguaruna tree classification and identification

Directory of Open Access Journals (Sweden)

Jernigan Kevin A

2008-05-01

Full Text Available Abstract Background The ethnobotanical literature still contains few detailed descriptions of the sensory criteria people use for judging membership in taxonomic categories. Olfactory criteria in particular have been explored very little. This paper will describe the importance of odor for woody plant taxonomy and identification among the Aguaruna Jívaro of the northern Peruvian Amazon, focusing on the Aguaruna category númi (trees excluding palms. Aguaruna informants almost always place trees that they consider to have a similar odor together as kumpají – 'companions,' a metaphor they use to describe trees that they consider to be related. Methods The research took place in several Aguaruna communities in the upper Marañón region of the Peruvian Amazon. Structured interview data focus on informant criteria for membership in various folk taxa of trees. Informants were also asked to explain what members of each group of related companions had in common. This paper focuses on odor and taste criteria that came to light during these structured interviews. Botanical voucher specimens were collected, wherever possible. Results Of the 182 tree folk genera recorded in this study, 51 (28% were widely considered to possess a distinctive odor. Thirty nine of those (76% were said to have odors similar to some other tree, while the other 24% had unique odors. Aguaruna informants very rarely described tree odors in non-botanical terms. Taste was used mostly to describe trees with edible fruits. Trees judged to be related were nearly always in the same botanical family. Conclusion The results of this study illustrate that odor of bark, sap, flowers, fruit and leaves are important clues that help the Aguaruna to judge the relatedness of trees found in their local environment. In contrast, taste appears to play a more limited role. The results suggest a more general ethnobotanical hypothesis that could be tested in other cultural settings: people tend to

McMYB10 regulates coloration via activating McF3'H and later structural genes in ever-red leaf crabapple.

Science.gov (United States)

Tian, Ji; Peng, Zhen; Zhang, Jie; Song, Tingting; Wan, Huihua; Zhang, Meiling; Yao, Yuncong

2015-09-01

The ever-red leaf trait, which is important for breeding ornamental and higher anthocyanin plants, rarely appears in Malus families, but little is known about the regulation of anthocyanin biosynthesis involved in the red leaves. In our study, HPLC analysis showed that the anthocyanin concentration in ever-red leaves, especially cyanidin, was significantly higher than that in evergreen leaves. The transcript level of McMYB10 was significantly correlated with anthocyanin synthesis between the 'Royalty' and evergreen leaf 'Flame' cultivars during leaf development. We also found the ever-red leaf colour cultivar 'Royalty' contained the known R6 : McMYB10 sequence, but was not in the evergreen leaf colour cultivar 'Flame', which have been reported in apple fruit. The distinction in promoter region maybe is the main reason why higher expression level of McMYB10 in red foliage crabapple cultivar. Furthermore, McMYB10 promoted anthocyanin biosynthesis in crabapple leaves and callus at low temperatures and during long-day treatments. Both heterologous expression in tobacco (Nicotiana tabacum) and Arabidopsis pap1 mutant, and homologous expression in crabapple and apple suggested that McMYB10 could promote anthocyanins synthesis and enhanced anthocyanin accumulation in plants. Interestingly, electrophoretic mobility shift assays, coupled with yeast one-hybrid analysis, revealed that McMYB10 positively regulates McF3'H via directly binding to AACCTAAC and TATCCAACC motifs in the promoter. To sum up, our results demonstrated that McMYB10 plays an important role in ever-red leaf coloration, by positively regulating McF3'H in crabapple. Therefore, our work provides new perspectives for ornamental fruit tree breeding. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Tree Nut Allergies

Science.gov (United States)

... Blog Vision Awards Common Allergens Tree Nut Allergy Tree Nut Allergy Learn about tree nut allergy, how ... a Tree Nut Label card . Allergic Reactions to Tree Nuts Tree nuts can cause a severe and ...

Stem water storage in five coexisting temperate broad-leaved tree species: significance, temporal dynamics and dependence on tree functional traits.

Science.gov (United States)

Köcher, Paul; Horna, Viviana; Leuschner, Christoph

2013-08-01

The functional role of internal water storage is increasingly well understood in tropical trees and conifers, while temperate broad-leaved trees have only rarely been studied. We examined the magnitude and dynamics of the use of stem water reserves for transpiration in five coexisting temperate broad-leaved trees with largely different morphology and physiology (genera Fagus, Fraxinus, Tilia, Carpinus and Acer). We expected that differences in water storage patterns would mostly reflect species differences in wood anatomy (ring vs. diffuse-porous) and wood density. Sap flux density was recorded synchronously at five positions along the root-to-branch flow path of mature trees (roots, three stem positions and branches) with high temporal resolution (2 min) and related to stem radius changes recorded with electronic point dendrometers. The daily amount of stored stem water withdrawn for transpiration was estimated by comparing the integrated flow at stem base and stem top. The temporal coincidence of flows at different positions and apparent time lags were examined by cross-correlation analysis. Our results confirm that internal water stores play an important role in the four diffuse-porous species with estimated 5-12 kg day(-1) being withdrawn on average in 25-28 m tall trees representing 10-22% of daily transpiration; in contrast, only 0.5-2.0 kg day(-1) was withdrawn in ring-porous Fraxinus. Wood density had a large influence on storage; sapwood area (diffuse- vs. ring-porous) may be another influential factor but its effect was not significant. Across the five species, the length of the time lag in flow at stem top and stem base was positively related to the size of stem storage. The stem stores were mostly exhausted when the soil matrix potential dropped below -0.1 MPa and daily mean vapor pressure deficit exceeded 3-5 hPa. We conclude that stem storage is an important factor improving the water balance of diffuse-porous temperate broad-leaved trees in moist

Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English ...

Indian Academy of Sciences (India)

Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English: Ashoka; Hindi: Asok) ofCaesalpilliaceae is a medium sized extremely ornamental evergreen tree with numerous spreading and drooping branches, compound leaves and orange-yellow flowers in clusters. Fruits are black, leathery pods with compressed seeds.

Tree species diversity in the Eastern Ghats of northern Andhra Pradesh, India

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M. Tarakeswara Naidu

2015-06-01

Full Text Available The present study was conducted to analyze tree species diversity in the tropical forests of the Eastern Ghats of northern Andhra Pradesh, India.  A total of 270 species of trees (≥15cm girth at breast height pertaining to 177 genera belonging to 55 families were recorded.  Among the 270 species, 141 species were observed to be common, 78 were occasional and 51 species were rare in the study area.  Fabaceae was the dominant family with 33 species followed by Rubiaceae with 15 species and Malvaceae, Moraceae and Phyllanthaceae with 13 species each.  The genera with the highest number of species include Ficus (12 species, Diospyros (8 species, Albizia and Grewia (6 species each, Acacia and Bauhinia (5 species each.  Forty-five percent of the species were indigenous. This illustrates the diversity of the tree species in the studied area of the Eastern Ghats and also emphasizes the need for their conservation. 

Twentieth-century decline of large-diameter trees in Yosemite National Park, California, USA

Science.gov (United States)

Lutz, J.A.; van Wagtendonk, J.W.; Franklin, J.F.

2009-01-01

Studies of forest change in western North America often focus on increased densities of small-diameter trees rather than on changes in the large tree component. Large trees generally have lower rates of mortality than small trees and are more resilient to climate change, but these assumptions have rarely been examined in long-term studies. We combined data from 655 historical (1932-1936) and 210 modern (1988-1999) vegetation plots to examine changes in density of large-diameter trees in Yosemite National Park (3027 km2). We tested the assumption of stability for large-diameter trees, as both individual species and communities of large-diameter trees. Between the 1930s and 1990s, large-diameter tree density in Yosemite declined 24%. Although the decrease was apparent in all forest types, declines were greatest in subalpine and upper montane forests (57.0% of park area), and least in lower montane forests (15.3% of park area). Large-diameter tree densities of 11 species declined while only 3 species increased. Four general patterns emerged: (1) Pinus albicaulis, Quercus chrysolepis, and Quercus kelloggii had increases in density of large-diameter trees occur throughout their ranges; (2) Pinus jeffreyi, Pinus lambertiana, and Pinus ponderosa, had disproportionately larger decreases in large-diameter tree densities in lower-elevation portions of their ranges; (3) Abies concolor and Pinus contorta, had approximately uniform decreases in large-diameter trees throughout their elevational ranges; and (4) Abies magnifica, Calocedrus decurrens, Juniperus occidentalis, Pinus monticola, Pseudotsuga menziesii, and Tsuga mertensiana displayed little or no change in large-diameter tree densities. In Pinus ponderosa-Calocedrus decurrens forests, modern large-diameter tree densities were equivalent whether or not plots had burned since 1936. However, in unburned plots, the large-diameter trees were predominantly A. concolor, C. decurrens, and Q. chrysolepis, whereas P. ponderosa

Big trees, old trees, and growth factor tables

Science.gov (United States)

Kevin T. Smith

2018-01-01

The potential for a tree to reach a great size and to live a long life frequently captures the public's imagination. Sometimes the desire to know the age of an impressively large tree is simple curiosity. For others, the date-of-tree establishment can make a big diff erence for management, particularly for trees at historic sites or those mentioned in property...

A Suffix Tree Or Not a Suffix Tree?

DEFF Research Database (Denmark)

Starikovskaya, Tatiana; Vildhøj, Hjalte Wedel

2015-01-01

In this paper we study the structure of suffix trees. Given an unlabeled tree r on n nodes and suffix links of its internal nodes, we ask the question “Is r a suffix tree?”, i.e., is there a string S whose suffix tree has the same topological structure as r? We place no restrictions on S, in part...

Trends in savanna structure and composition along an aridity gradient in the Kalahari

CSIR Research Space (South Africa)

Scholes, RJ

2002-06-01

Full Text Available Rooyen 1998). Sa- line areas such as the vast Makgadigadi pan support halophytic shrubs and grasses or are bare. Non-saline pans, for example at Nxai pan, support sedge- and grasslands, sometimes with tree clumps on slightly more elevated ground... being larger than about 20 mm (major axis); fine-leafed is smaller than 20 mm, and usually less than 2 mm. Deciduous means that > 90% of all tree and shrub leaves are lost for at least three months, evergreen means that > 80% of tree leaf is retained...

Documenting biogeographical patterns of African timber species using herbarium records: a conservation perspective based on native trees from Angola.

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Maria M Romeiras

Full Text Available In many tropical regions the development of informed conservation strategies is hindered by a dearth of biodiversity information. Biological collections can help to overcome this problem, by providing baseline information to guide research and conservation efforts. This study focuses on the timber trees of Angola, combining herbarium (2670 records and bibliographic data to identify the main timber species, document biogeographic patterns and identify conservation priorities. The study recognized 18 key species, most of which are threatened or near-threatened globally, or lack formal conservation assessments. Biogeographical analysis reveals three groups of species associated with the enclave of Cabinda and northwest Angola, which occur primarily in Guineo-Congolian rainforests, and evergreen forests and woodlands. The fourth group is widespread across the country, and is mostly associated with dry forests. There is little correspondence between the spatial pattern of species groups and the ecoregions adopted by WWF, suggesting that these may not provide an adequate basis for conservation planning for Angolan timber trees. Eight of the species evaluated should be given high conservation priority since they are of global conservation concern, they have very restricted distributions in Angola, their historical collection localities are largely outside protected areas and they may be under increasing logging pressure. High conservation priority was also attributed to another three species that have a large proportion of their global range concentrated in Angola and that occur in dry forests where deforestation rates are high. Our results suggest that timber tree species in Angola may be under increasing risk, thus calling for efforts to promote their conservation and sustainable exploitation. The study also highlights the importance of studying historic herbarium collections in poorly explored regions of the tropics, though new field surveys remain

Documenting biogeographical patterns of African timber species using herbarium records: a conservation perspective based on native trees from Angola.

Science.gov (United States)

Romeiras, Maria M; Figueira, Rui; Duarte, Maria Cristina; Beja, Pedro; Darbyshire, Iain

2014-01-01

In many tropical regions the development of informed conservation strategies is hindered by a dearth of biodiversity information. Biological collections can help to overcome this problem, by providing baseline information to guide research and conservation efforts. This study focuses on the timber trees of Angola, combining herbarium (2670 records) and bibliographic data to identify the main timber species, document biogeographic patterns and identify conservation priorities. The study recognized 18 key species, most of which are threatened or near-threatened globally, or lack formal conservation assessments. Biogeographical analysis reveals three groups of species associated with the enclave of Cabinda and northwest Angola, which occur primarily in Guineo-Congolian rainforests, and evergreen forests and woodlands. The fourth group is widespread across the country, and is mostly associated with dry forests. There is little correspondence between the spatial pattern of species groups and the ecoregions adopted by WWF, suggesting that these may not provide an adequate basis for conservation planning for Angolan timber trees. Eight of the species evaluated should be given high conservation priority since they are of global conservation concern, they have very restricted distributions in Angola, their historical collection localities are largely outside protected areas and they may be under increasing logging pressure. High conservation priority was also attributed to another three species that have a large proportion of their global range concentrated in Angola and that occur in dry forests where deforestation rates are high. Our results suggest that timber tree species in Angola may be under increasing risk, thus calling for efforts to promote their conservation and sustainable exploitation. The study also highlights the importance of studying historic herbarium collections in poorly explored regions of the tropics, though new field surveys remain a priority to

[Tomato peel: rare cause of biliary tract obstruction].

Science.gov (United States)

Hagymási, Krisztina; Péter, Zoltán; Csöregh, Eva; Szabó, Emese; Tulassay, Zsolt

2011-11-20

Foreign bodies in the biliary tree are rare causes of obstructive jaundice. Food bezoars are infrequent as well. They can cause biliary obstruction after biliary tract interventions, or in the presence of biliary-bowel fistula or duodenum diverticulum. Food bezoars usually pass the gastrointestinal tract without any symptoms, but they can cause abdominal pain and obstructive jaundice in the case of biliary tract obstruction. Endoscopic retrograde cholangio-pancreatography has the major role in the diagnosis and the treatment of the disease. Authors summarize the medical history of a 91-year-old female patient, who developed vomiting and right subcostal pain due to the presence of tomato peel within the ductus choledochus.

PARKS OF RECREATIONAL COMPLEXES OF SUDAK CITY

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Irina L. Potapenko

2017-01-01

Full Text Available Aim. Development of optimal paths of landscaping recreational complexes South-Eastern Crimea (Sudak for example, taking into account climatic, geographical and historical characteristics of the region. Material. Green plantings of recreational complexes have been surveyed in 2015–2016: the sanatorium "Sudak" of the Ministry of defense of the Russian Federation, the area is 26 ha; the pension "Crimean spring", an area is 10 ha; the pension "Zvezdniy", an area is 3 ha; the sanatorium "Sokol", an area is 3 ha; the Tourist and recreational complex "Sudak", an area is 17 ha. Results. Dendroflora of Sudak recreational facilities includes 151 species belonging to 90 genera and 47 families. The most represented species in the following families: Rosaceae – 27 (17,9%, Oleaceae – 12 (7,9%, Pinaceae – 12 (7,9%, Cupressaceae – 10 (6,7%, Fabaceae – 7 (4,6%. The greatest form variety is possessed by representatives of the family Cupressaceae (8, or 33,0%, the pyramidal form of cypress evergreen (Cupressus sempervirens `Pyramidalis` dominates among them. An assortment of ornamental trees and shrubs in the studied sites are quite diverse – 175 species and forms. Deciduous trees and shrubs prevail here – 60 (34,3% and 37 (21,1% species and forms respectively. There are 37 (21,1% species and forms of coniferous trees and shrubs. There are 24 (13,7% types and forms of evergreen foliage plants: shrubs – 18 (10,3%, trees – 4 (2,3%, lianas – 2 (1,1%. Main conclusions. The source of introductory material for the green construction of South-Eastern Crimea should be the representatives of families Cupressaceae, Pinaceae, Rosaceae, Oleaceae, Fabaceae those are the most adapted to the soil and climatic conditions of the region. Increasing the diversity of ornamental trees and shrubs should be achieved through the use of coniferous and evergreen plants. To create picturesque groups of plants with different emotional conten increasing the number of

Presence of understory shrubs constrains carbon gain in sunflecks by advance-regeneration seedlings: evidence from Quercus Rubra seedling grouwing in understory forest patches with or without evergreen shrubs present

Science.gov (United States)

E.T. Nilsen; T.T. Lei; S.W. Semones

2009-01-01

We investigated whether dynamic photosynthesis of understory Quercus rubra L. (Fagaceae) seedlings can acclimate to the altered pattern of sunflecks in forest patches with Rhododendron maximum L. (Ericaceae), an understory evergreen shrub. Maximum photosynthesis (A) and total CO2 accumulated during lightflecks was greatest for 400-s lightflecks, intermediate for 150-s...

Vegetation shift from deciduous to evergreen dwarf shrubs in response to selective herbivory offsets carbon losses: evidence from 19 years of warming and simulated herbivory in the subarctic tundra.

Science.gov (United States)

Ylänne, Henni; Stark, Sari; Tolvanen, Anne

2015-10-01

Selective herbivory of palatable plant species provides a competitive advantage for unpalatable plant species, which often have slow growth rates and produce slowly decomposable litter. We hypothesized that through a shift in the vegetation community from palatable, deciduous dwarf shrubs to unpalatable, evergreen dwarf shrubs, selective herbivory may counteract the increased shrub abundance that is otherwise found in tundra ecosystems, in turn interacting with the responses of ecosystem carbon (C) stocks and CO2 balance to climatic warming. We tested this hypothesis in a 19-year field experiment with factorial treatments of warming and simulated herbivory on the dominant deciduous dwarf shrub Vaccinium myrtillus. Warming was associated with a significantly increased vegetation abundance, with the strongest effect on deciduous dwarf shrubs, resulting in greater rates of both gross ecosystem production (GEP) and ecosystem respiration (ER) as well as increased C stocks. Simulated herbivory increased the abundance of evergreen dwarf shrubs, most importantly Empetrum nigrum ssp. hermaphroditum, which led to a recent shift in the dominant vegetation from deciduous to evergreen dwarf shrubs. Simulated herbivory caused no effect on GEP and ER or the total ecosystem C stocks, indicating that the vegetation shift counteracted the herbivore-induced C loss from the system. A larger proportion of the total ecosystem C stock was found aboveground, rather than belowground, in plots treated with simulated herbivory. We conclude that by providing a competitive advantage to unpalatable plant species with slow growth rates and long life spans, selective herbivory may promote aboveground C stocks in a warming tundra ecosystem and, through this mechanism, counteract C losses that result from plant biomass consumption. © 2015 John Wiley & Sons Ltd.

Tree-growth analyses to estimate tree species' drought tolerance

NARCIS (Netherlands)

Eilmann, B.; Rigling, A.

2012-01-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

TreeNetViz: revealing patterns of networks over tree structures.

Science.gov (United States)

Gou, Liang; Zhang, Xiaolong Luke

2011-12-01

Network data often contain important attributes from various dimensions such as social affiliations and areas of expertise in a social network. If such attributes exhibit a tree structure, visualizing a compound graph consisting of tree and network structures becomes complicated. How to visually reveal patterns of a network over a tree has not been fully studied. In this paper, we propose a compound graph model, TreeNet, to support visualization and analysis of a network at multiple levels of aggregation over a tree. We also present a visualization design, TreeNetViz, to offer the multiscale and cross-scale exploration and interaction of a TreeNet graph. TreeNetViz uses a Radial, Space-Filling (RSF) visualization to represent the tree structure, a circle layout with novel optimization to show aggregated networks derived from TreeNet, and an edge bundling technique to reduce visual complexity. Our circular layout algorithm reduces both total edge-crossings and edge length and also considers hierarchical structure constraints and edge weight in a TreeNet graph. These experiments illustrate that the algorithm can reduce visual cluttering in TreeNet graphs. Our case study also shows that TreeNetViz has the potential to support the analysis of a compound graph by revealing multiscale and cross-scale network patterns. © 2011 IEEE

Photosynthetic limitation and mechanisms of photoprotection under drought and recovery of Calotropis procera, an evergreen C3 from arid regions.

Science.gov (United States)

Rivas, Rebeca; Frosi, Gabriella; Ramos, Diego G; Pereira, Silvia; Benko-Iseppon, Ana M; Santos, Mauro G

2017-09-01

Calotropis procera is a C 3 plant native from arid environmental zones. It is an evergreen, shrubby, non-woody plant with intense photosynthetic metabolism during the dry season. We measured photosynthetic parameters and leaf biochemical traits, such as gas exchange, photochemical parameters, A/C i analysis, organic solutes, and antioxidant enzymes under controlled conditions in potted plants during drought stress, and following recovery conditions to obtain a better insight in the drought stress responses of C. procera. Indeed, different processes contribute to the drought stress resilience of C. procera and to the fast recovery after rehydration. The parameters analyzed showed that C. procera has a high efficiency for energy dissipation. The photosynthetic machinery is protected by a robust antioxidant system and photoprotective mechanisms such as alternative pathways for electrons (photorespiration and day respiration). Under severe drought stress, increased stomatal limitation and decreased biochemical limitation permitted C. procera to maintain maximum rate of Rubisco carboxylation (V c,max ) and photosynthetic rate (A max ). On the other hand, limitation of stomatal or mesophyll CO 2 diffusion did not impair fast recovery, maintaining V c,max , chloroplast CO 2 concentration (C c ) and mesophyll conductance (g m ) unchanged while electron flow used for RuBP carboxylation (J c ) and A max increased. The ability to tolerate drought stress and the fast recovery of this evergreen C 3 species was also due to leaf anti-oxidative stress enzyme activity, and photosynthetic pigments. Thus, these different drought tolerance mechanisms allowed high performance of photosynthetic metabolism by drought stressed plants during the re-watering period. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

TREE SELECTING AND TREE RING MEASURING IN DENDROCHRONOLOGICAL INVESTIGATIONS

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Sefa Akbulut

2004-04-01

Full Text Available Dendrochronology is a method of dating which makes use of the annual nature of tree growth. Dendrochronology may be divided into a number of subfields, each of which covers one or more aspects of the use of tree ring data: dendroclimatology, dendrogeomorphology, dendrohydrology, dendroecology, dendroarchaelogy, and dendrogylaciology. Basic of all form the analysis of the tree rings. The wood or tree rings can aid to dating past events about climatology, ecology, geology, hydrology. Dendrochronological studies are conducted either on increment cores or on discs. It may be seen abnormalities on tree rings during the measurement like that false rings, missing rings, reaction wood. Like that situation, increment cores must be extracted from four different sides of each tree and be studied as more as on tree.

Phytosociological studies of the sacred grove of Kanyakumari district, Tamilnadu, India

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S. Sukumaran

2018-04-01

Full Text Available Sacred groves are forest patches conserved by the local people through religious and cultural practices. These groves are important reservoirs of biodiversity, preserving indigenous plant species and serving as asylum of Rare, Endangered and Threatened (RET species. The present study was carried out in Muppuram coastal sacred grove of Kanyakumari district to reveal the plant diversity, structure and regeneration pattern of trees using quadrate method. About 102 plant species were recorded from the total area (0.2 ha of the grove studied. The vegetation of the grove clearly indicates tropical dry evergreen forest. Malvaceae was the dominant family. Young plant species were dominating than older ones (> 160 cm. To avoid the rapid environmental degradation of the sacred grove, conserving the groves is urgent and it is necessary to conduct more researches on this grove as well as other groves of the district.

Visualizing Individual Tree Differences in Tree-Ring Studies

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Mario Trouillier

2018-04-01

Full Text Available Averaging tree-ring measurements from multiple individuals is one of the most common procedures in dendrochronology. It serves to filter out noise from individual differences between trees, such as competition, height, and micro-site effects, which ideally results in a site chronology sensitive to regional scale factors such as climate. However, the climate sensitivity of individual trees can be modulated by factors like competition, height, and nitrogen deposition, calling attention to whether average chronologies adequately assess climatic growth-control. In this study, we demonstrate four simple but effective methods to visually assess differences between individual trees. Using individual tree climate-correlations we: (1 employed jitter plots with superimposed metadata to assess potential causes for these differences; (2 plotted the frequency distributions of climate correlations over time as heat maps; (3 mapped the spatial distribution of climate sensitivity over time to assess spatio-temporal dynamics; and (4 used t-distributed Stochastic Neighborhood Embedding (t-SNE to assess which trees were generally more similar in terms of their tree-ring pattern and their correlation with climate variables. This suite of exploratory methods can indicate if individuals in tree-ring datasets respond differently to climate variability, and therefore, should not solely be explored with climate correlations of the mean population chronology.

Influence of summer marine fog and low cloud stratus on water relations of evergreen woody shrubs (Arctostaphylos: Ericaceae) in the chaparral of central California.

Science.gov (United States)

Vasey, Michael C; Loik, Michael E; Parker, V Thomas

2012-10-01

Mediterranean-type climate (MTC) regions around the world are notable for cool, wet winters and hot, dry summers. A dominant vegetation type in all five MTC regions is evergreen, sclerophyllous shrubland, called chaparral in California. The extreme summer dry season in California is moderated by a persistent low-elevation layer of marine fog and cloud cover along the margin of the Pacific coast. We tested whether late dry season water potentials (Ψ(min)) of chaparral shrubs, such as Arctostaphylos species in central California, are influenced by this coast-to-interior climate gradient. Lowland coastal (maritime) shrubs were found to have significantly less negative Ψ(min) than upland interior shrubs (interior), and stable isotope (δ(13)C) values exhibited greater water use efficiency in the interior. Post-fire resprouter shrubs (resprouters) had significantly less negative Ψ(min) than co-occurring obligate seeder shrubs (seeders) in interior and transitional chaparral, possibly because resprouters have deeper root systems with better access to subsurface water than shallow-rooted seeders. Unexpectedly, maritime resprouters and seeders did not differ significantly in their Ψ(min), possibly reflecting more favorable water availability for shrubs influenced by the summer marine layer. Microclimate and soil data also suggest that maritime habitats have more favorable water availability than the interior. While maritime seeders constitute the majority of local Arctostaphylos endemics, they exhibited significantly greater vulnerability to xylem cavitation than interior seeders. Because rare seeders in maritime chaparral are more vulnerable to xylem cavitation than interior seeders, the potential breakdown of the summer marine layer along the coast is of potential conservation concern.

Fault tree handbook

International Nuclear Information System (INIS)

Haasl, D.F.; Roberts, N.H.; Vesely, W.E.; Goldberg, F.F.

1981-01-01

This handbook describes a methodology for reliability analysis of complex systems such as those which comprise the engineered safety features of nuclear power generating stations. After an initial overview of the available system analysis approaches, the handbook focuses on a description of the deductive method known as fault tree analysis. The following aspects of fault tree analysis are covered: basic concepts for fault tree analysis; basic elements of a fault tree; fault tree construction; probability, statistics, and Boolean algebra for the fault tree analyst; qualitative and quantitative fault tree evaluation techniques; and computer codes for fault tree evaluation. Also discussed are several example problems illustrating the basic concepts of fault tree construction and evaluation

The contribution of trees and palms to a balanced diet in three rural villages of the Fatick Province, Senegal

DEFF Research Database (Denmark)

Sambou, Antoine; Kæstel, Pernille; Theilade, Ida

2016-01-01

to quantify the dietary intake of meals. The consumption of tree and palm foods in meals was frequent, mentioned by 93–99% of the families depending on the time of year. Products of 11 tree and palm species were used in meals, with Adansonia digitata (baobab) leaves the most frequently mentioned. The energy......Improving the quality of people’s diets represents a major challenge for developing countries, particularly in Sahelian African countries. Foods from trees, shrubs, and palms are present in many meals and may improve dietary quality, especially for rural communities but, as their contributions have...... meals, and consumption was frequent in February and June, but rare in October. We discuss the possibilities of improving nutrition in rural communities from an increased use of trees and palms....

Mapping forest tree species over large areas with partially cloudy Landsat imagery

Science.gov (United States)

Turlej, K.; Radeloff, V.

2017-12-01

Forests provide numerous services to natural systems and humankind, but which services forest provide depends greatly on their tree species composition. That makes it important to track not only changes in forest extent, something that remote sensing excels in, but also to map tree species. The main goal of our work was to map tree species with Landsat imagery, and to identify how to maximize mapping accuracy by including partially cloudy imagery. Our study area covered one Landsat footprint (26/28) in Northern Wisconsin, USA, with temperate and boreal forests. We selected this area because it contains numerous tree species and variable forest composition providing an ideal study area to test the limits of Landsat data. We quantified how species-level classification accuracy was affected by a) the number of acquisitions, b) the seasonal distribution of observations, and c) the amount of cloud contamination. We classified a single year stack of Landsat-7, and -8 images data with a decision tree algorithm to generate a map of dominant tree species at the pixel- and stand-level. We obtained three important results. First, we achieved producer's accuracies in the range 70-80% and user's accuracies in range 80-90% for the most abundant tree species in our study area. Second, classification accuracy improved with more acquisitions, when observations were available from all seasons, and is the best when images with up to 40% cloud cover are included. Finally, classifications for pure stands were 10 to 30 percentage points better than those for mixed stands. We conclude that including partially cloudy Landsat imagery allows to map forest tree species with accuracies that were previously only possible for rare years with many cloud-free observations. Our approach thus provides important information for both forest management and science.

Floristic structure and biomass distribution of a tropical seasonal rain forest in Xishuangbanna, southwest China

Energy Technology Data Exchange (ETDEWEB)

Shanmughavel, P.; Zheng Zheng; Sha Liqing; Cao Min [Chinese Academy of Sciences, Kunming (China). Dept. of Forest Ecology

2001-07-01

The aim of this research was to study the forest community structure, tree species diversity and biomass production of a tropical seasonal rain forest in Xishuangbanna, southwest China. The community structure showed a diversified species composition and supported many species of economic significance. This tropical rain forest in closely related to Malaysian forests. The biomass and its distribution were studied using standard regression analysis and the clear-cut method for shrubs and herbs. The total biomass was 360.9 t/ha and its allocation in different layers was: tree layer 352.5 t/ha, shrub layer 4.7 t/ha, liana 3.1 t/ha and herb layer 0.5 t/ha. Most of the biomass was concentrated in the trees: stem 241.2 t/ha, root 69.6 t/ha, branch 37.2 t/ha and leaves 4.3 t/ha. The DBH class allocation of the tree biomass was concentrated in the middle DBH class. The biomass of six DBH classes from 20 to 80 cm was 255.4 t/ha. There are twenty-six species with biomass over 0.5% of the total biomass of the tree layer, and three species with biomass over 5%, i.e., Pometia tomentosa, Barringtonia macrostachya (5.4%) and Terminalia myriocarpa (5.2%). Data on stem, branch, leaves and root of the individual tree species were used to develop regression models. D{sup 2}H was found to be the best estimator of the biomass in this tropical rain forest. However, higher biomass figures have been reported from tropical forests elsewhere e.g., 415-520 t/ha in the tropical forests of Cambodia, the tropical moist mixed dipterocarp forests, and the tropical moist logged moist evergreen-high, medium, and low yield forests of Sri Lanka. In some forests, lower accumulation of biomass was reported, e.g., 10-295 t/ha in the tropical moist forests of Bangladesh, the tropical moist dense forest of Cambodia, the tropical dry forests of India, the tropical moist forests of Peninsular-Malaysia, the tropical moist mixed dipterocarp forests of Sarawak-Malaysia, the tropical evergreen forests of

Temperate forest and open landscapes are distinct alternative states as reflected in canopy height and tree cover

NARCIS (Netherlands)

Xu, Chi; Vergnon, Remi; Cornelissen, J.H.C.; Hantson, S.; Holmgren, M.; Nes, van E.H.; Scheffer, M.

2015-01-01

The suggestion that woody plants of intermediate height between trees and shrubs (‘trubs’) are conspicuously rare [1] invoked much interest. Two comments showed regional species lists that did not have this paucity of medium-sized woody plants 2 and 3. In response, we hypothesized that the

Modular tree automata

DEFF Research Database (Denmark)

Bahr, Patrick

2012-01-01

Tree automata are traditionally used to study properties of tree languages and tree transformations. In this paper, we consider tree automata as the basis for modular and extensible recursion schemes. We show, using well-known techniques, how to derive from standard tree automata highly modular...

Forest chimpanzees (Pan troglodytes verus) remember the location of numerous fruit trees.

Science.gov (United States)

Normand, Emmanuelle; Ban, Simone Dagui; Boesch, Christophe

2009-11-01

It is assumed that spatial memory contributes crucially to animal cognition since animals' habitats entail a large number of dispersed and unpredictable food sources. Spatial memory has been investigated under controlled conditions, with different species showing and different conditions leading to varying performance levels. However, the number of food sources investigated is very low compared to what exists under natural conditions, where food resources are so abundant that it is difficult to precisely identify what is available. By using a detailed botanical map containing over 12,499 trees known to be used by the Taï chimpanzees, we created virtual maps of all productive fruit trees to simulate potential strategies used by wild chimpanzees to reach resources without spatial memory. First, we simulated different assumptions concerning the chimpanzees' preference for a particular tree species, and, second, we varied the detection field to control for the possible use of smell to detect fruiting trees. For all these assumptions, we compared simulated distance travelled, frequencies of trees visited, and revisit rates with what we actually observed in wild chimpanzees. Our results show that chimpanzees visit rare tree species more frequently, travel shorter distances to reach them, and revisit the same trees more often than if they had no spatial memory. In addition, we demonstrate that chimpanzees travel longer distances to reach resources where they will eat for longer periods of time, and revisit resources more frequently where they ate for a long period of time during their first visit. Therefore, this study shows that forest chimpanzees possess a precise spatial memory which allows them to remember the location of numerous resources and use this information to select the most attractive resources.

Rate of tree carbon accumulation increases continuously with tree size.

Science.gov (United States)

Stephenson, N L; Das, A J; Condit, R; Russo, S E; Baker, P J; Beckman, N G; Coomes, D A; Lines, E R; Morris, W K; Rüger, N; Alvarez, E; Blundo, C; Bunyavejchewin, S; Chuyong, G; Davies, S J; Duque, A; Ewango, C N; Flores, O; Franklin, J F; Grau, H R; Hao, Z; Harmon, M E; Hubbell, S P; Kenfack, D; Lin, Y; Makana, J-R; Malizia, A; Malizia, L R; Pabst, R J; Pongpattananurak, N; Su, S-H; Sun, I-F; Tan, S; Thomas, D; van Mantgem, P J; Wang, X; Wiser, S K; Zavala, M A

2014-03-06

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle--particularly net primary productivity and carbon storage--increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree's total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to undertand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

Approximate estimation of system reliability via fault trees

International Nuclear Information System (INIS)

Dutuit, Y.; Rauzy, A.

2005-01-01

In this article, we show how fault tree analysis, carried out by means of binary decision diagrams (BDD), is able to approximate reliability of systems made of independent repairable components with a good accuracy and a good efficiency. We consider four algorithms: the Murchland lower bound, the Barlow-Proschan lower bound, the Vesely full approximation and the Vesely asymptotic approximation. For each of these algorithms, we consider an implementation based on the classical minimal cut sets/rare events approach and another one relying on the BDD technology. We present numerical results obtained with both approaches on various examples

The importance of Acacia trees for insectivorous bats and arthropods in the Arava desert.

Directory of Open Access Journals (Sweden)

Talya D Hackett

Full Text Available Anthropogenic habitat modification often has a profound negative impact on the flora and fauna of an ecosystem. In parts of the Middle East, ephemeral rivers (wadis are characterised by stands of acacia trees. Green, flourishing assemblages of these trees are in decline in several countries, most likely due to human-induced water stress and habitat changes. We examined the importance of healthy acacia stands for bats and their arthropod prey in comparison to other natural and artificial habitats available in the Arava desert of Israel. We assessed bat activity and species richness through acoustic monitoring for entire nights and concurrently collected arthropods using light and pit traps. Dense green stands of acacia trees were the most important natural desert habitat for insectivorous bats. Irrigated gardens and parks in villages and fields of date palms had high arthropod levels but only village sites rivalled acacia trees in bat activity level. We confirmed up to 13 bat species around a single patch of acacia trees; one of the richest sites in any natural desert habitat in Israel. Some bat species utilised artificial sites; others were found almost exclusively in natural habitats. Two rare species (Barbastella leucomelas and Nycteris thebaica were identified solely around acacia trees. We provide strong evidence that acacia trees are of unique importance to the community of insectivorous desert-dwelling bats, and that the health of the trees is crucial to their value as a foraging resource. Consequently, conservation efforts for acacia habitats, and in particular for the green more densely packed stands of trees, need to increase to protect this vital habitat for an entire community of protected bats.

The Importance of Acacia Trees for Insectivorous Bats and Arthropods in the Arava Desert

Science.gov (United States)

Hackett, Talya D.; Korine, Carmi; Holderied, Marc W.

2013-01-01

Anthropogenic habitat modification often has a profound negative impact on the flora and fauna of an ecosystem. In parts of the Middle East, ephemeral rivers (wadis) are characterised by stands of acacia trees. Green, flourishing assemblages of these trees are in decline in several countries, most likely due to human-induced water stress and habitat changes. We examined the importance of healthy acacia stands for bats and their arthropod prey in comparison to other natural and artificial habitats available in the Arava desert of Israel. We assessed bat activity and species richness through acoustic monitoring for entire nights and concurrently collected arthropods using light and pit traps. Dense green stands of acacia trees were the most important natural desert habitat for insectivorous bats. Irrigated gardens and parks in villages and fields of date palms had high arthropod levels but only village sites rivalled acacia trees in bat activity level. We confirmed up to 13 bat species around a single patch of acacia trees; one of the richest sites in any natural desert habitat in Israel. Some bat species utilised artificial sites; others were found almost exclusively in natural habitats. Two rare species (Barbastella leucomelas and Nycteris thebaica) were identified solely around acacia trees. We provide strong evidence that acacia trees are of unique importance to the community of insectivorous desert-dwelling bats, and that the health of the trees is crucial to their value as a foraging resource. Consequently, conservation efforts for acacia habitats, and in particular for the green more densely packed stands of trees, need to increase to protect this vital habitat for an entire community of protected bats. PMID:23441145

Rare cancers are not so rare: The rare cancer burden in Europe

NARCIS (Netherlands)

Gatta, Gemma; van der Zwan, Jan Maarten; Casali, Paolo G.; Siesling, Sabine; Dei Tos, Angelo Paolo; Kunkler, Ian; Otter, Renee; Licitra, Lisa

2011-01-01

Purpose: Epidemiologic information on rare cancers is scarce. The project Surveillance of Rare Cancers in Europe (RARECARE) provides estimates of the incidence, prevalence and survival of rare cancers in Europe based on a new and comprehensive list of these diseases. Materials and methods: RARECARE

Guava SSR analysis: Diversity assessment and similarity to accessions associated with reducing citrus greening in Vietnam

Science.gov (United States)

The guava (Psidium guajava) is an evergreen tree in the Myrtaceae, native to tropical America. It is grown throughout the tropics and subtropics of the world, and is used as a fresh fruit and processed into juice, jelly and paste. Recent introduction of citrus greening (huanglongbing) into Florida...

Dalbergia latifolia Roxb. (East Indian Rosewood) of Leguminosae is ...

Indian Academy of Sciences (India)

Dalbergia latifolia Roxb. (East Indian Rosewood) of Leguminosae is a large deciduous or nearly evergreen tree that grows in mixed deciduous forests with teak. Leaves are compound. The creamy white flowers are borne on branched inflorescences. The indehiscent dry pod bears. 1-4 seeds. Inset - a juvenile plant.

Changes to southern Appalachian water yield and stormflow after loss of a foundation species

Science.gov (United States)

Steven T. Brantley; Chelcy Ford Miniat; Katherine J. Elliott; Stephanie H. Laseter; James M. Vose

2014-01-01

Few studies have examined how insect outbreaks affect landscape-level hydrologic processes. We report the hydrologic effects of the invasive, exotic hemlock woolly adelgid (HWA) in a headwater catchment in the southern Appalachian Mountains. The study watershed experienced complete mortality of an evergreen tree species, Tsuga canadensis (L.) Carr. (...

A bijection between phylogenetic trees and plane oriented recursive trees

OpenAIRE

Prodinger, Helmut

2017-01-01

Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the respective representations a 2-partitions and trapezoidal words.

The ecology, distribution, conservation and management of large old trees.

Science.gov (United States)

Lindenmayer, David B; Laurance, William F

2017-08-01

Large old trees are some of the most iconic biota on earth and are integral parts of many terrestrial ecosystems including those in tropical, temperate and boreal forests, deserts, savannas, agro-ecological areas, and urban environments. In this review, we provide new insights into the ecology, function, evolution and management of large old trees through broad cross-disciplinary perspectives from literatures in plant physiology, growth and development, evolution, habitat value for fauna and flora, and conservation management. Our review reveals that the diameter, height and longevity of large old trees varies greatly on an inter-specific basis, thereby creating serious challenges in defining large old trees and demanding an ecosystem- and species-specific definition that will only rarely be readily transferable to other species or ecosystems. Such variation is also manifested by marked inter-specific differences in the key attributes of large old trees (beyond diameter and height) such as the extent of buttressing, canopy architecture, the extent of bark micro-environments and the prevalence of cavities. We found that large old trees play an extraordinary range of critical ecological roles including in hydrological regimes, nutrient cycles and numerous ecosystem processes. Large old trees strongly influence the spatial and temporal distribution and abundance of individuals of the same species and populations of numerous other plant and animal species. We suggest many key characteristics of large old trees such as extreme height, prolonged lifespans, and the presence of cavities - which confer competitive and evolutionary advantages in undisturbed environments - can render such trees highly susceptible to a range of human influences. Large old trees are vulnerable to threats ranging from droughts, fire, pests and pathogens, to logging, land clearing, landscape fragmentation and climate change. Tackling such diverse threats is challenging because they often

Carbon and water vapore balance in a primary subtropical evergreen forest in Southewest China under a changing climate

Science.gov (United States)

Song, Q. H.; Zhang, Y. P.

2017-12-01

The Ailaoshan Nature Reserve in Yunnan province, southwestern China hosts about 5000 ha of primary subtropical evergreen mountain cloud forest. A widespread and severe drought occurred in southwestern China in 2009 and 2010, providing a unique opportunity to directly evaluate how water use efficiency (WUE) changes with drought stress in the primary subtropical forest. We calculated WUE using measures of gross primary production (GPP) and evapotranspiration (ET) from five years of continuous eddy covariance measurements (2009-2013) obtained over a primary subtropical evergreen broadleaved forest in southwestern China. Annual mean WUE exhibited a decreasing trend from 2009 to 2013, varying from 2.28 to 2.68 g C kg H2O-1. The multiyear average WUE was 2.48 ± 0.17 (mean ± standard deviation) g C kg H2O-1. WUE increased greatly in the driest year (2009), due to a larger decline in ET than in GPP. Unfortunately, the same study site experienced a particularly extreme climate anomaly during January 2015, with a heavy snow of up to 50 cm in depth, which led to severe forest damage. The forest canopy was severely damaged by the heavy snow, and the leaf area index (LAI) decreased significantly from January to July 2015. GPP, net ecosystem exchange (NEE), and Ecosystem respiration (Reco) all sharply decreased in 2015 after the heavy snow. On average, a strong decrease of 544 g C m-2 year-1 in annual NEE in 2015 was associated with a decrease of 829 g C m-2 year-1 in annual GPP and a decrease of 285 g C m-2 year-1 in annual Reco. Overall, annual net C uptake in 2015 was reduced by 76% compared to the mean C uptake of the previous four years. A sharp increase in carbon uptake was also observed in 2016, indicating that long-term, continuous measurements should be carried out to evaluate the overall response to the disturbance.

Miocene fossil plants from Bukpyeong Formation of Bukpyeong Basin in Donghae City, Gangwon-do Province, Korea and their palaeoenvironmental implications

Science.gov (United States)

Jeong, Eun Kyoung; Kim, Hyun Joo; Uemura, Kazuhiko; Kim, Kyungsik

2016-04-01

The Tertiary sedimentary basins are distributed along the eastern coast of Korean Peninsula. The northernmost Bukpyeong Basin is located in Donghae City, Gangwon-do Province, Korea. The Bukpyeong Basin consists of Bukpyeong Formation and Dogyeongri Conglomerate in ascending order. The geologic age of Bukpyeong Formation has been suggested as from Early Miocene to Pliocene, In particular, Lee & Jacobs (2010) suggested the age of the Bukpyeong Formation as late Early Miocene to early Middle Miocene based on the fossils of rodent teeth. Sedimentary environment has been thought as mainly fresh water lake and/or swamp partly influenced by marine water. Lately, new outcrops of Bukpyeong Formation were exposed during the road construction and abundant fossil plants were yielded from the newly exposed outcrops. As a result of palaeobotanical studies 47 genera of 23 families have been found. This fossil plant assemblage is composed of gymnosperms and dicotyledons. Gymnosperms were Pinaceae (e.g., Pinus, Tsuga), Sciadopityaceae (e.g., Sciadopitys) and Cupressaceae with well-preserved Metasequoia cones. Dicotyledons were deciduous trees such as Betulaceae (e.g., Alnus, Carpinus) and Sapindaceae (e.g., Acer, Aesculus, Sapindus), and evergreen trees such as evergreen Fagaceae (e.g., Castanopsis, Cyclobalanopsis, Pasania) and Lauraceae (e.g., Cinnamomum, Machilus). In addition, fresh water plants such as Hemitrapa (Lytraceae) and Ceratophyllum (Ceratophyllaceae) were also found. The fossil plant assemblage of the Bukpyeong Formation supported the freshwater environment implied by previous studies. It can be suggested that the palaeoflora of Bukpyeong Formation was oak-laurel forest with broad-leaved evergreen and deciduous trees accompanying commonly by conifers of Pinaceae and Cupressaceae under warm-temperate climate.

Event-scale soil moisture dynamics in open evergreen woodlands of southwest Spain

Science.gov (United States)

Lozano-Parra, F. J.; Schnabel, S.; Gómez-Gutiérrez, Á.

2012-04-01

Rangelands with a disperse tree cover occupy large areas in the southwestern part of the Iberian Pensinsula and are also found in other parts of the Mediterranean. In these grazed, savannah-like ecosystems water constitutes an important limiting factor for vegetation growth because of the strong summer dry period, being annual potential evapotranspiration nearly twice the annual rainfall amount. Previous studies by other authors have found lower values of soil water content below the tree canopy as compared to the open spaces, covered only by herbaceous vegetation. The differences of soil moisture between tree covered and open areas vary along the year, commonly being highest during autumn, low when water content is close to saturation and the inverse during summer. Our studies indicate that the spatial variation of soil moisture is more complex. The main objective of this study is to analyze soil moisture dynamics at the event scale below tree canopies (Quercus ilex) and in the open spaces. Because soils are commonly very shallow (Cambisols) and a high concentration of grass roots is found in the upper five centimetres, soil moisture measurements were carried out at 5, 10, 15 and 30 cm depth. The study area is located in Extremadura. Soil moisture is measured continuously with a time resolution of 30 minutes using capacitive sensors and rainfall is registered in 5-minute intervals. Data from the hydrological year 2010-11 are presented here. The main factors which produced variations in soil moisture in the upper 5 cm were amount and duration of the rainfall event. Rainfall intensity was also significantly related with an increase of the water content. At greater depth (30 cm) soil moisture was more related with antecedent rainfall, as for example the amount of precipitation registered 30 and 45 days prior to the event. Maximum increases produced by a rainstorm were approximately 0.20 m3m-3 in grasslands and 0.17 m3m-3 below tree canopy. However, in the uppermost

Rate of tree carbon accumulation increases continuously with tree size

Science.gov (United States)

Stephenson, N.L.; Das, A.J.; Condit, R.; Russo, S.E.; Baker, P.J.; Beckman, N.G.; Coomes, D.A.; Lines, E.R.; Morris, W.K.; Rüger, N.; Álvarez, E.; Blundo, C.; Bunyavejchewin, S.; Chuyong, G.; Davies, S.J.; Duque, Á.; Ewango, C.N.; Flores, O.; Franklin, J.F.; Grau, H.R.; Hao, Z.; Harmon, M.E.; Hubbell, S.P.; Kenfack, D.; Lin, Y.; Makana, J.-R.; Malizia, A.; Malizia, L.R.; Pabst, R.J.; Pongpattananurak, N.; Su, S.-H.; Sun, I-F.; Tan, S.; Thomas, D.; van Mantgem, P.J.; Wang, X.; Wiser, S.K.; Zavala, M.A.

2014-01-01

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle—particularly net primary productivity and carbon storage - increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree’s total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to understand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

IcyTree: rapid browser-based visualization for phylogenetic trees and networks.

Science.gov (United States)

Vaughan, Timothy G

2017-08-01

IcyTree is an easy-to-use application which can be used to visualize a wide variety of phylogenetic trees and networks. While numerous phylogenetic tree viewers exist already, IcyTree distinguishes itself by being a purely online tool, having a responsive user interface, supporting phylogenetic networks (ancestral recombination graphs in particular), and efficiently drawing trees that include information such as ancestral locations or trait values. IcyTree also provides intuitive panning and zooming utilities that make exploring large phylogenetic trees of many thousands of taxa feasible. IcyTree is a web application and can be accessed directly at http://tgvaughan.github.com/icytree . Currently supported web browsers include Mozilla Firefox and Google Chrome. IcyTree is written entirely in client-side JavaScript (no plugin required) and, once loaded, does not require network access to run. IcyTree is free software, and the source code is made available at http://github.com/tgvaughan/icytree under version 3 of the GNU General Public License. tgvaughan@gmail.com. © The Author(s) 2017. Published by Oxford University Press.

Tree die-off in response to global change-type drought: Mortality insights from a decade of plant water potential measurements

Science.gov (United States)

Breshears, D.D.; Myers, O.B.; Meyer, Clifton W.; Barnes, F.J.; Zou, C.B.; Allen, Craig D.; McDowell, N.G.; Pockman, W. T.

2009-01-01

Global climate change is projected to produce warmer, longer, and more frequent droughts, referred to here as “global change-type droughts”, which have the potential to trigger widespread tree die-off. However, drought-induced tree mortality cannot be predicted with confidence, because long-term field observations of plant water stress prior to, and culminating in, mortality are rare, precluding the development and testing of mechanisms. Here, we document plant water stress in two widely distributed, co-occurring species, piñon pine (Pinus edulis) and juniper (Juniperus monosperma), over more than a decade, leading up to regional-scale die-off of piñon pine trees in response to global change-related drought. Piñon leaf water potentials remained substantially below their zero carbon assimilation point for at least 10 months prior to dying, in contrast to those of juniper, which rarely dropped below their zero-assimilation point. These data suggest that piñon mortality was driven by protracted water stress, leading to carbon starvation and associated increases in susceptibility to other disturbances (eg bark beetles), a finding that should help to improve predictions of mortality during drought.

Insights on the evolutionary origin of Detarioideae, a clade of ecologically dominant tropical African trees.

Science.gov (United States)

de la Estrella, Manuel; Forest, Félix; Wieringa, Jan J; Fougère-Danezan, Marie; Bruneau, Anne

2017-06-01

African tropical forests are generally considered less diverse than their Neotropical and Asian counterparts. By contrast, the Detarioideae is much more diverse in Africa than in South America and Asia. To better understand the evolution of this contrasting diversity pattern, we investigated the biogeographical and ecological origin of this subfamily, testing whether they originated in dry biomes surrounding the Tethys Seaway as currently hypothesized for many groups of Leguminosae. We constructed the largest time-calibrated phylogeny for the subfamily to date, reconstructed ancestral states for geography and biome/habitat, estimated diversification and extinction rates, and evaluated biome/habitat and geographic shifts in Detarioideae. The ancestral habitat of Detarioideae is postulated to be a primary forest (terra firme) originated in Africa-South America, in the early Palaeocene, after which several biome/habitat and geographic shifts occurred. The origin of Detarioideae is older than previous estimates, which postulated a dry (succulent) biome origin according to the Tethys Seaway hypothesis, and instead we reveal a post Gondwana and terra firme origin for this early branching clade of legumes. Detarioideae include some of the most dominant trees in evergreen forests and have likely played a pivotal role in shaping continental African forest diversity. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Spatial variability of biotic and abiotic tree establishment constraints across a treeline ecotone in the Alaska range.

Science.gov (United States)

Stueve, Kirk M; Isaacs, Rachel E; Tyrrell, Lucy E; Densmore, Roseann V

2011-02-01

Throughout interior Alaska (U.S.A.), a gradual warming trend in mean monthly temperatures occurred over the last few decades (approximatlely 2-4 degrees C). The accompanying increases in woody vegetation at many alpine treeline (hereafter treeline) locations provided an opportunity to examine how biotic and abiotic local site conditions interact to control tree establishment patterns during warming. We devised a landscape ecological approach to investigate these relationships at an undisturbed treeline in the Alaska Range. We identified treeline changes between 1953 (aerial photography) and 2005 (satellite imagery) in a geographic information system (GIS) and linked them with corresponding local site conditions derived from digital terrain data, ancillary climate data, and distance to 1953 trees. Logistic regressions enabled us to rank the importance of local site conditions in controlling tree establishment. We discovered a spatial transition in the importance of tree establishment controls. The biotic variable (proximity to 1953 trees) was the most important tree establishment predictor below the upper tree limit, providing evidence of response lags with the abiotic setting and suggesting that tree establishment is rarely in equilibrium with the physical environment or responding directly to warming. Elevation and winter sun exposure were important predictors of tree establishment at the upper tree limit, but proximity to trees persisted as an important tertiary predictor, indicating that tree establishment may achieve equilibrium with the physical environment. However, even here, influences from the biotic variable may obscure unequivocal correlations with the abiotic setting (including temperature). Future treeline expansion will likely be patchy and challenging to predict without considering the spatial variability of influences from biotic and abiotic local site conditions.

Continental-scale consequences of tree die-offs in North America: identifying where forest loss matters most

Science.gov (United States)

Swann, Abigail L. S.; Laguë, Marysa M.; Garcia, Elizabeth S.; Field, Jason P.; Breshears, David D.; Moore, David J. P.; Saleska, Scott R.; Stark, Scott C.; Villegas, Juan Camilo; Law, Darin J.; Minor, David M.

2018-05-01

Regional-scale tree die-off events driven by drought and warming and associated pests and pathogens have occurred recently on all forested continents and are projected to increase in frequency and extent with future warming. Within areas where tree mortality has occurred, ecological, hydrological and meteorological consequences are increasingly being documented. However, the potential for tree die-off to impact vegetation processes and related carbon dynamics in areas remote to where die-off occurs has rarely been systematically evaluated, particularly for multiple distinct regions within a given continent. Such remote impacts can occur when climate effects of local vegetation change are propagated by atmospheric circulation—the phenomena of ‘ecoclimate teleconnections’. We simulated tree die-off events in the 13 most densely forested US regions (selected from the 20 US National Ecological Observatory Network [NEON] domains) and found that tree die-off even for smaller regions has potential to affect climate and hence Gross Primary Productivity (GPP) in disparate regions (NEON domains), either positively or negatively. Some regions exhibited strong teleconnections to several others, and some regions were relatively sensitive to tree loss regardless of what other region the tree loss occurred in. For the US as a whole, loss of trees in the Pacific Southwest—an area undergoing rapid tree die-off—had the largest negative impact on remote US GPP whereas loss of trees in the Mid-Atlantic had the largest positive impact. This research lays a foundation for hypotheses that identify how the effects of tree die-off (or other types of tree loss such as deforestation) can ricochet across regions by revealing hot-spots of forcing and response. Such modes of connectivity have direct applicability for improving models of climate change impacts and for developing more informed and coordinated carbon accounting across regions.

Carry-over effect of Thidiazuron on banana in vitro proliferation at ...

African Journals Online (AJOL)

Thidiazuron (TDZ) is an active cytokinin that was shown to induce increased shoot proliferation and habituation in black walnut, Phaseolus lunatus and evergreen azalea, which are tree species but has not been widely investigated in bananas. Unlike other cytokines commonly in use that are adeninebased, TDZ is a urea ...

Mangifera indica L. (the mango plant) of Anacardiaceae is a large ...

Indian Academy of Sciences (India)

Mangifera indica L. (the mango plant) of Anacardiaceae is a large spreading evergreen tree with simple leaves and small reddish white or yellowish green flowers borne on much-branched inflorescences. More than 500 varieties of mango are cultivated in Indiafor their large, sweet, edible fruits which are of high economic ...

Water use efficiency in a primary subtropical evergreen forest in Southwest China.

Science.gov (United States)

Song, Qing-Hai; Fei, Xue-Hai; Zhang, Yi-Ping; Sha, Li-Qing; Liu, Yun-Tong; Zhou, Wen-Jun; Wu, Chuan-Sheng; Lu, Zhi-Yun; Luo, Kang; Gao, Jin-Bo; Liu, Yu-Hong

2017-02-20

We calculated water use efficiency (WUE) using measures of gross primary production (GPP) and evapotranspiration (ET) from five years of continuous eddy covariance measurements (2009-2013) obtained over a primary subtropical evergreen broadleaved forest in southwestern China. Annual mean WUE exhibited a decreasing trend from 2009 to 2013, varying from ~2.28 to 2.68 g C kg H 2 O -1 . The multiyear average WUE was 2.48 ± 0.17 (mean ± standard deviation) g C kg H 2 O -1 . WUE increased greatly in the driest year (2009), due to a larger decline in ET than in GPP. At the diurnal scale, WUE in the wet season reached 5.1 g C kg H 2 O -1 in the early morning and 4.6 g C kg H 2 O -1 in the evening. WUE in the dry season reached 3.1 g C kg H 2 O -1 in the early morning and 2.7 g C kg H 2 O -1 in the evening. During the leaf emergence stage, the variation of WUE could be suitably explained by water-related variables (relative humidity (RH), soil water content at 100 cm (SWC_100)), solar radiation and the green index (Sgreen). These results revealed large variation in WUE at different time scales, highlighting the importance of individual site characteristics.

TreeScaper: Visualizing and Extracting Phylogenetic Signal from Sets of Trees.

Science.gov (United States)

Huang, Wen; Zhou, Guifang; Marchand, Melissa; Ash, Jeremy R; Morris, David; Van Dooren, Paul; Brown, Jeremy M; Gallivan, Kyle A; Wilgenbusch, Jim C

2016-12-01

Modern phylogenomic analyses often result in large collections of phylogenetic trees representing uncertainty in individual gene trees, variation across genes, or both. Extracting phylogenetic signal from these tree sets can be challenging, as they are difficult to visualize, explore, and quantify. To overcome some of these challenges, we have developed TreeScaper, an application for tree set visualization as well as the identification of distinct phylogenetic signals. GUI and command-line versions of TreeScaper and a manual with tutorials can be downloaded from https://github.com/whuang08/TreeScaper/releases TreeScaper is distributed under the GNU General Public License. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

An Updated Review of Dendrochronological Investigations in Mexico, a Megadiverse Country with a High Potential for Tree-Ring Sciences

Directory of Open Access Journals (Sweden)

Andrea C. Acosta-Hernández

2017-05-01

Full Text Available Dendrochronology is a very useful science to reconstruct the long-term responses of trees and other woody plants forming annual rings in response to their environment. The present review considered Mexico, a megadiverse country with a high potential for tree-ring sciences given its high climatic and environmental variability. We reviewed papers considering Mexican tree species that were published from 2001 to 2016. Most of these studies examined tree species from temperate forests, mainly in the pine and fir species. The review included 31 tree species. The most intensively sampled family and species were the Pinaceae and Douglas fir (Pseudotsuga menziessi (Mirb. Franco, respectively. Some threatened tree species were also studied. Dendrochronological investigations were mainly conducted in northern and central Mexico, with Durango being the most sampled state. The reviewed studies were mostly developed for hydroclimatic reconstructions, which were mainly based on the tree-ring width as a proxy for the climate. Tree-ring studies were carried out in both national and foreign institutions. Our review identified relevant research gaps for dendrochronologists such as: (i biomes which are still scarcely studied (e.g., tropical dry forests and (ii approaches still rarely applied to Mexican forests as dendroecology.

Flowering Trees

Indian Academy of Sciences (India)

IAS Admin

Flowering Trees. Ailanthus excelsa Roxb. (INDIAN TREE OF. HEAVEN) of Simaroubaceae is a lofty tree with large pinnately compound alternate leaves, which are ... inflorescences, unisexual and greenish-yellow. Fruits are winged, wings many-nerved. Wood is used in making match sticks. 1. Male flower; 2. Female flower.

Herbivory and the cycling of nitrogen and phosphorus in isolated California oak trees

Science.gov (United States)

David Y. Hollinger

1986-01-01

Nitrogen and phosphorus flow in litterfall and throughfall were studied in two California Quercus species (the evergreen Q.agrifolia and deciduous Q. lobata) before, during, and after an outbreak of the California oak moth, Phryganidia californica. All of the foliage of both oak species was...

Why do trees die? Characterizing the drivers of background tree mortality

Science.gov (United States)

Das, Adrian J.; Stephenson, Nathan L.; Davis, Kristin P.

2016-01-01

The drivers of background tree mortality rates—the typical low rates of tree mortality found in forests in the absence of acute stresses like drought—are central to our understanding of forest dynamics, the effects of ongoing environmental changes on forests, and the causes and consequences of geographical gradients in the nature and strength of biotic interactions. To shed light on factors contributing to background tree mortality, we analyzed detailed pathological data from 200,668 tree-years of observation and 3,729 individual tree deaths, recorded over a 13-yr period in a network of old-growth forest plots in California's Sierra Nevada mountain range. We found that: (1) Biotic mortality factors (mostly insects and pathogens) dominated (58%), particularly in larger trees (86%). Bark beetles were the most prevalent (40%), even though there were no outbreaks during the study period; in contrast, the contribution of defoliators was negligible. (2) Relative occurrences of broad classes of mortality factors (biotic, 58%; suppression, 51%; and mechanical, 25%) are similar among tree taxa, but may vary with tree size and growth rate. (3) We found little evidence of distinct groups of mortality factors that predictably occur together on trees. Our results have at least three sets of implications. First, rather than being driven by abiotic factors such as lightning or windstorms, the “ambient” or “random” background mortality that many forest models presume to be independent of tree growth rate is instead dominated by biotic agents of tree mortality, with potentially critical implications for forecasting future mortality. Mechanistic models of background mortality, even for healthy, rapidly growing trees, must therefore include the insects and pathogens that kill trees. Second, the biotic agents of tree mortality, instead of occurring in a few predictable combinations, may generally act opportunistically and with a relatively large degree of independence from

Effect of Different Tree canopies on the Brightness Temperature of Snowpack

Science.gov (United States)

Mousavi, S.; De Roo, R. D.; Brucker, L.

2017-12-01

Snow stores the water we drink and is essential to grow food that we eat. But changes in snow quantities such as snow water equivalent (SWE) are underway and have serious consequences. So, effective management of the freshwater reservoir requires to monitor frequently (weekly or better) the spatial distribution of SWE and snowpack wetness. Both microwave radar and radiometer systems have long been considered as relevant remote sensing tools in retrieving globally snow physical parameters of interest thanks to their all-weather operation capability. However, their observations are sensitive to the presence of tree canopies, which in turns impacts SWE estimation. To address this long-lasting challenge, we parked a truck-mounted microwave radiometer system for an entire winter in a rare area where it exists different tree types in the different cardinal directions. We used dual-polarization microwave radiometers at three different frequencies (1.4, 19, and 37 GHz), mounted on a boom truck to observe continuously the snowpack surrounding the truck. Observations were recorded at different incidence angles. These measurements have been collected in Grand Mesa National Forest, Colorado as part of the NASA SnowEx 2016-17. In this presentation, the effect of Engelmann Spruce and Aspen trees on the measured brightness temperature of snow is discussed. It is shown that Engelmann Spruce trees increases the brightness temperature of the snowpack more than Aspen trees do. Moreover, the elevation angular dependence of the measured brightness temperatures of snowpack with and without tree canopies is investigated in the context of SWE retrievals. A time-lapse camera was monitoring a snow post installed in the sensors' field of view to characterize the brightness temperature change as snow depth evolved. Also, our study takes advantage of the snowpit measurements that were collected near the radiometers' field of view.

Cache-Oblivious Search Trees via Binary Trees of Small Height

DEFF Research Database (Denmark)

Brodal, G.S.; Fagerberg, R.; Jacob, R.

2002-01-01

We propose a version of cache oblivious search trees which is simpler than the previous proposal of Bender, Demaine and Farach-Colton and has the same complexity bounds. In particular, our data structure avoids the use of weight balanced B-trees, and can be implemented as just a single array......, and range queries in worst case O(logB n + k/B) memory transfers, where k is the size of the output.The basic idea of our data structure is to maintain a dynamic binary tree of height log n+O(1) using existing methods, embed this tree in a static binary tree, which in turn is embedded in an array in a cache...... oblivious fashion, using the van Emde Boas layout of Prokop.We also investigate the practicality of cache obliviousness in the area of search trees, by providing an empirical comparison of different methods for laying out a search tree in memory....

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Boswellia serrata Roxb. ex Colebr. (Indian Frankincense tree) of Burseraceae is a large-sized deciduous tree that is native to India. Bark is thin, greenish-ash-coloured that exfoliates into smooth papery flakes. Stem exudes pinkish resin ... Fruit is a three-valved capsule. A green gum-resin exudes from the ...

Systolic trees and systolic language recognition by tree automata

Energy Technology Data Exchange (ETDEWEB)

Steinby, M

1983-01-01

K. Culik II, J. Gruska, A. Salomaa and D. Wood have studied the language recognition capabilities of certain types of systolically operating networks of processors (see research reports Cs-81-32, Cs-81-36 and Cs-82-01, Univ. of Waterloo, Ontario, Canada). In this paper, their model for systolic VLSI trees is formalised in terms of standard tree automaton theory, and the way in which some known facts about recognisable forests and tree transductions can be applied in VLSI tree theory is demonstrated. 13 references.

DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

Science.gov (United States)

Wehe, André; Bansal, Mukul S; Burleigh, J Gordon; Eulenstein, Oliver

2008-07-01

DupTree is a new software program for inferring rooted species trees from collections of gene trees using the gene tree parsimony approach. The program implements a novel algorithm that significantly improves upon the run time of standard search heuristics for gene tree parsimony, and enables the first truly genome-scale phylogenetic analyses. In addition, DupTree allows users to examine alternate rootings and to weight the reconciliation costs for gene trees. DupTree is an open source project written in C++. DupTree for Mac OS X, Windows, and Linux along with a sample dataset and an on-line manual are available at http://genome.cs.iastate.edu/CBL/DupTree

Flowering Trees

Indian Academy of Sciences (India)

More Details Fulltext PDF. Volume 8 Issue 8 August 2003 pp 112-112 Flowering Trees. Zizyphus jujuba Lam. of Rhamnaceae · More Details Fulltext PDF. Volume 8 Issue 9 September 2003 pp 97-97 Flowering Trees. Moringa oleifera · More Details Fulltext PDF. Volume 8 Issue 10 October 2003 pp 100-100 Flowering Trees.

Biomass expansion factors of Olea ferruginea (Royle) in sub tropical ...

African Journals Online (AJOL)

Wood biomass gives information about total productivity of the forest as well as individual tree. Olea ferruginea (Royle) which is small and evergreen is widely distributed in native sub tropical forests of Pakistan and extensively used as fuelwood domestically. This study was carried out in the sub tropical forests of Pakistan at ...

Calophyllum inophyllum L. of Clusiaceae is a handsome medium ...

Indian Academy of Sciences (India)

Calophyllum inophyllum L. of Clusiaceae is a handsome medium-sized evergreen tree. The leaves are shiny with many fine parallel lateral veins. Flowers in clusters are white, fragrant and bear many stamens. Fruit is hard, subglobose and little smaller than a golf ball. Bark astringent, sweet and diuretic. Seed oil is used ...

An Assessment of the Effectiveness of Tree-Based Models for Multi-Variate Flood Damage Assessment in Australia

Directory of Open Access Journals (Sweden)

Roozbeh Hasanzadeh Nafari

2016-07-01

Full Text Available Flood is a frequent natural hazard that has significant financial consequences for Australia. In Australia, physical losses caused by floods are commonly estimated by stage-damage functions. These methods usually consider only the depth of the water and the type of buildings at risk. However, flood damage is a complicated process, and it is dependent on a variety of factors which are rarely taken into account. This study explores the interaction, importance, and influence of water depth, flow velocity, water contamination, precautionary measures, emergency measures, flood experience, floor area, building value, building quality, and socioeconomic status. The study uses tree-based models (regression trees and bagging decision trees and a dataset collected from 2012 to 2013 flood events in Queensland, which includes information on structural damages, impact parameters, and resistance variables. The tree-based approaches show water depth, floor area, precautionary measures, building value, and building quality to be important damage-influencing parameters. Furthermore, the performance of the tree-based models is validated and contrasted with the outcomes of a multi-parameter loss function (FLFArs from Australia. The tree-based models are shown to be more accurate than the stage-damage function. Consequently, considering more parameters and taking advantage of tree-based models is recommended. The outcome is important for improving established Australian flood loss models and assisting decision-makers and insurance companies dealing with flood risk assessment.

Rare earth metals, rare earth hydrides, and rare earth oxides as thin films

International Nuclear Information System (INIS)

Gasgnier, M.

1980-01-01

The review deals with pure rare earth materials such as rare earth metals, rare earth hydrides, and rare earth oxides as thin films. Several preparation techniques, control methods, and nature of possible contaminations of thin films are described. These films can now be produced in an extremely well-known state concerning chemical composition, structure and texture. Structural, electric, magnetic, and optical properties of thin films are studied and discussed in comparison with the bulk state. The greatest contamination of metallic rare earth thin films is caused by reaction with hydrogen or with water vapour. The compound with an f.c.c. structure is the dihydride LnH 2 (Ln = lanthanides). The oxygen contamination takes place after annealing at higher temperatures. Then there appears a compound with a b.c.c. structure which is the C-type sesquioxide C-Ln 2 O 3 . At room atmosphere dihydride light rare earth thin films are converted to hydroxide Ln(OH) 3 . For heavy rare earth thin films the oxinitride LnNsub(x)Osub(y) is observed. The LnO-type compound was never seen. The present review tries to set the stage anew for the investigations to be undertaken in the future especially through the new generations of electron microscopes

Embedding complete ternary tree in hypercubes using AVL trees

NARCIS (Netherlands)

S.A. Choudum; I. Raman (Indhumathi)

2008-01-01

htmlabstractA complete ternary tree is a tree in which every non-leaf vertex has exactly three children. We prove that a complete ternary tree of height h, TTh, is embeddable in a hypercube of dimension . This result coincides with the result of [2]. However, in this paper, the embedding utilizes

Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.

Science.gov (United States)

Fouquier, Jennifer; Rideout, Jai Ram; Bolyen, Evan; Chase, John; Shiffer, Arron; McDonald, Daniel; Knight, Rob; Caporaso, J Gregory; Kelley, Scott T

2016-02-24

Fungi play critical roles in many ecosystems, cause serious diseases in plants and animals, and pose significant threats to human health and structural integrity problems in built environments. While most fungal diversity remains unknown, the development of PCR primers for the internal transcribed spacer (ITS) combined with next-generation sequencing has substantially improved our ability to profile fungal microbial diversity. Although the high sequence variability in the ITS region facilitates more accurate species identification, it also makes multiple sequence alignment and phylogenetic analysis unreliable across evolutionarily distant fungi because the sequences are hard to align accurately. To address this issue, we created ghost-tree, a bioinformatics tool that integrates sequence data from two genetic markers into a single phylogenetic tree that can be used for diversity analyses. Our approach starts with a "foundation" phylogeny based on one genetic marker whose sequences can be aligned across organisms spanning divergent taxonomic groups (e.g., fungal families). Then, "extension" phylogenies are built for more closely related organisms (e.g., fungal species or strains) using a second more rapidly evolving genetic marker. These smaller phylogenies are then grafted onto the foundation tree by mapping taxonomic names such that each corresponding foundation-tree tip would branch into its new "extension tree" child. We applied ghost-tree to graft fungal extension phylogenies derived from ITS sequences onto a foundation phylogeny derived from fungal 18S sequences. Our analysis of simulated and real fungal ITS data sets found that phylogenetic distances between fungal communities computed using ghost-tree phylogenies explained significantly more variance than non-phylogenetic distances. The phylogenetic metrics also improved our ability to distinguish small differences (effect sizes) between microbial communities, though results were similar to non

Trees are good, but…

Science.gov (United States)

E.G. McPherson; F. Ferrini

2010-01-01

We know that “trees are good,” and most people believe this to be true. But if this is so, why are so many trees neglected, and so many tree wells empty? An individual’s attitude toward trees may result from their firsthand encounters with specific trees. Understanding how attitudes about trees are shaped, particularly aversion to trees, is critical to the business of...

Multiple-purpose trees for pastoral farming in New Zealand: with emphasis on tree legumes. [Lucerne Tree: Medick Tree

Energy Technology Data Exchange (ETDEWEB)

Davies, D J.G.; Macfarlane, R P

1979-01-01

The potential for soil conservation and agroforestry of several native and exotic legumes is discussed. Flowering period, chemical composition of leaves/pods, hardiness to frost and drought, timber value, forage potential for livestock and bees, ornamental value and other products are tabulated with information on up to 38 species. Two low-growing species that have proved useful for slope stabilization as well as forage are tree lucerne (Cytisus palmensis) and tree medick (Medicago arborea), the latter being shrubby and more suitable for cold districts. Gleditsia triacanthos is recommended as a shade and fodder tree for farm pasture.

Is the extremely rare Iberian endemic plant species Castrilanthemum debeauxii (Compositae, Anthemideae) a 'living fossil'? Evidence from a multi-locus species tree reconstruction.

Science.gov (United States)

Tomasello, Salvatore; Álvarez, Inés; Vargas, Pablo; Oberprieler, Christoph

2015-01-01

The present study provides results of multi-species coalescent species tree analyses of DNA sequences sampled from multiple nuclear and plastid regions to infer the phylogenetic relationships among the members of the subtribe Leucanthemopsidinae (Compositae, Anthemideae), to which besides the annual Castrilanthemum debeauxii (Degen, Hervier & É.Rev.) Vogt & Oberp., one of the rarest flowering plant species of the Iberian Peninsula, two other unispecific genera (Hymenostemma, Prolongoa), and the polyploidy complex of the genus Leucanthemopsis belong. Based on sequence information from two single- to low-copy nuclear regions (C16, D35, characterised by Chapman et al. (2007)), the multi-copy region of the nrDNA internal transcribed spacer regions ITS1 and ITS2, and two intergenic spacer regions of the cpDNA gene trees were reconstructed using Bayesian inference methods. For the reconstruction of a multi-locus species tree we applied three different methods: (a) analysis of concatenated sequences using Bayesian inference (MrBayes), (b) a tree reconciliation approach by minimizing the number of deep coalescences (PhyloNet), and (c) a coalescent-based species-tree method in a Bayesian framework ((∗)BEAST). All three species tree reconstruction methods unequivocally support the close relationship of the subtribe with the hitherto unclassified genus Phalacrocarpum, the sister-group relationship of Castrilanthemum with the three remaining genera of the subtribe, and the further sister-group relationship of the clade of Hymenostemma+Prolongoa with a monophyletic genus Leucanthemopsis. Dating of the (∗)BEAST phylogeny supports the long-lasting (Early Miocene, 15-22Ma) taxonomical independence and the switch from the plesiomorphic perennial to the apomorphic annual life-form assumed for the Castrilanthemum lineage that may have occurred not earlier than in the Pliocene (3Ma) when the establishment of a Mediterranean climate with summer droughts triggered evolution towards

Estimating the global conservation status of more than 15,000 Amazonian tree species

Science.gov (United States)

ter Steege, Hans; Pitman, Nigel C. A.; Killeen, Timothy J.; Laurance, William F.; Peres, Carlos A.; Guevara, Juan Ernesto; Salomão, Rafael P.; Castilho, Carolina V.; Amaral, Iêda Leão; de Almeida Matos, Francisca Dionízia; de Souza Coelho, Luiz; Magnusson, William E.; Phillips, Oliver L.; de Andrade Lima Filho, Diogenes; de Jesus Veiga Carim, Marcelo; Irume, Mariana Victória; Martins, Maria Pires; Molino, Jean-François; Sabatier, Daniel; Wittmann, Florian; López, Dairon Cárdenas; da Silva Guimarães, José Renan; Mendoza, Abel Monteagudo; Vargas, Percy Núñez; Manzatto, Angelo Gilberto; Reis, Neidiane Farias Costa; Terborgh, John; Casula, Katia Regina; Montero, Juan Carlos; Feldpausch, Ted R.; Honorio Coronado, Euridice N.; Montoya, Alvaro Javier Duque; Zartman, Charles Eugene; Mostacedo, Bonifacio; Vasquez, Rodolfo; Assis, Rafael L.; Medeiros, Marcelo Brilhante; Simon, Marcelo Fragomeni; Andrade, Ana; Camargo, José Luís; Laurance, Susan G. W.; Nascimento, Henrique Eduardo Mendonça; Marimon, Beatriz S.; Marimon, Ben-Hur; Costa, Flávia; Targhetta, Natalia; Vieira, Ima Célia Guimarães; Brienen, Roel; Castellanos, Hernán; Duivenvoorden, Joost F.; Mogollón, Hugo F.; Piedade, Maria Teresa Fernandez; Aymard C., Gerardo A.; Comiskey, James A.; Damasco, Gabriel; Dávila, Nállarett; García-Villacorta, Roosevelt; Diaz, Pablo Roberto Stevenson; Vincentini, Alberto; Emilio, Thaise; Levis, Carolina; Schietti, Juliana; Souza, Priscila; Alonso, Alfonso; Dallmeier, Francisco; Ferreira, Leandro Valle; Neill, David; Araujo-Murakami, Alejandro; Arroyo, Luzmila; Carvalho, Fernanda Antunes; Souza, Fernanda Coelho; do Amaral, Dário Dantas; Gribel, Rogerio; Luize, Bruno Garcia; Pansonato, Marcelo Petrati; Venticinque, Eduardo; Fine, Paul; Toledo, Marisol; Baraloto, Chris; Cerón, Carlos; Engel, Julien; Henkel, Terry W.; Jimenez, Eliana M.; Maas, Paul; Mora, Maria Cristina Peñuela; Petronelli, Pascal; Revilla, Juan David Cardenas; Silveira, Marcos; Stropp, Juliana; Thomas-Caesar, Raquel; Baker, Tim R.; Daly, Doug; Paredes, Marcos Ríos; da Silva, Naara Ferreira; Fuentes, Alfredo; Jørgensen, Peter Møller; Schöngart, Jochen; Silman, Miles R.; Arboleda, Nicolás Castaño; Cintra, Bruno Barçante Ladvocat; Valverde, Fernando Cornejo; Di Fiore, Anthony; Phillips, Juan Fernando; van Andel, Tinde R.; von Hildebrand, Patricio; Barbosa, Edelcilio Marques; de Matos Bonates, Luiz Carlos; de Castro, Deborah; de Sousa Farias, Emanuelle; Gonzales, Therany; Guillaumet, Jean-Louis; Hoffman, Bruce; Malhi, Yadvinder; de Andrade Miranda, Ires Paula; Prieto, Adriana; Rudas, Agustín; Ruschell, Ademir R.; Silva, Natalino; Vela, César I. A.; Vos, Vincent A.; Zent, Eglée L.; Zent, Stanford; Cano, Angela; Nascimento, Marcelo Trindade; Oliveira, Alexandre A.; Ramirez-Angulo, Hirma; Ramos, José Ferreira; Sierra, Rodrigo; Tirado, Milton; Medina, Maria Natalia Umaña; van der Heijden, Geertje; Torre, Emilio Vilanova; Vriesendorp, Corine; Wang, Ophelia; Young, Kenneth R.; Baider, Claudia; Balslev, Henrik; de Castro, Natalia; Farfan-Rios, William; Ferreira, Cid; Mendoza, Casimiro; Mesones, Italo; Torres-Lezama, Armando; Giraldo, Ligia Estela Urrego; Villarroel, Daniel; Zagt, Roderick; Alexiades, Miguel N.; Garcia-Cabrera, Karina; Hernandez, Lionel; Huamantupa-Chuquimaco, Isau; Milliken, William; Cuenca, Walter Palacios; Pansini, Susamar; Pauletto, Daniela; Arevalo, Freddy Ramirez; Sampaio, Adeilza Felipe; Valderrama Sandoval, Elvis H.; Gamarra, Luis Valenzuela

2015-01-01

Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened plant species on Earth by 22%. We show that the trends observed in Amazonia apply to trees throughout the tropics, and we predict that most of the world’s >40,000 tropical tree species now qualify as globally threatened. A gap analysis suggests that existing Amazonian protected areas and indigenous territories will protect viable populations of most threatened species if these areas suffer no further degradation, highlighting the key roles that protected areas, indigenous peoples, and improved governance can play in preventing large-scale extinctions in the tropics in this century. PMID:26702442

Shedding light on tree growth : ring analysis of juvenile tropical trees

NARCIS (Netherlands)

Soliz Gamboa, C.C.

2010-01-01

In the understory of tropical forests light is believed to be the main limiting growth factor for the newly established trees. Trees growing in shade of the understory may experience periods of slow radial growth. It is expected that gaps created by tree or branch fall will provoke tree growth

Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

Science.gov (United States)

2013-01-01

Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

Neuroendocrine tumor of the inguinal node: A very rare presentation

Directory of Open Access Journals (Sweden)

Niharika Bisht

2017-12-01

Full Text Available Neuroendocrine tumors are a broad family of tumors arising most commonly in the gastrointestinal tract and the bronchus pulmonary tree. The other common sounds are the parathyroid, pituitary and adrenal gland. Inguinal node as a primary presentation of a neuroendocrine tumor is an extremely rare presentation. We present the case of a 43-year-old-male who presented with the complaints of an inguinal node swelling without any other symptoms and on further evaluation was diagnosed to have a non-metastatic neuroendocrine tumor of the inguinal node. He was treated with a combination of chemotherapy and surgery and is presently awaiting completion chemotherapy.

Trees

Science.gov (United States)

Al-Khaja, Nawal

2007-01-01

This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

Protected areas: mixed success in conserving East Africa's evergreen forests.

Science.gov (United States)

Pfeifer, Marion; Burgess, Neil D; Swetnam, Ruth D; Platts, Philip J; Willcock, Simon; Marchant, Robert

2012-01-01

In East Africa, human population growth and demands for natural resources cause forest loss contributing to increased carbon emissions and reduced biodiversity. Protected Areas (PAs) are intended to conserve habitats and species. Variability in PA effectiveness and 'leakage' (here defined as displacement of deforestation) may lead to different trends in forest loss within, and adjacent to, existing PAs. Here, we quantify spatial variation in trends of evergreen forest coverage in East Africa between 2001 and 2009, and test for correlations with forest accessibility and environmental drivers. We investigate PA effectiveness at local, landscape and national scales, comparing rates of deforestation within park boundaries with those detected in park buffer zones and in unprotected land more generally. Background forest loss (BFL) was estimated at -9.3% (17,167 km(2)), but varied between countries (range: -0.9% to -85.7%; note: no BFL in South Sudan). We document high variability in PA effectiveness within and between PA categories. The most successful PAs were National Parks, although only 26 out of 48 parks increased or maintained their forest area (i.e. Effective parks). Forest Reserves (Ineffective parks, i.e. parks that lose forest from within boundaries: 204 out of 337), Nature Reserves (six out of 12) and Game Parks (24 out of 26) were more likely to lose forest cover. Forest loss in buffer zones around PAs exceeded background forest loss, in some areas indicating leakage driven by Effective National Parks. Human pressure, forest accessibility, protection status, distance to fires and long-term annual rainfall were highly significant drivers of forest loss in East Africa. Some of these factors can be addressed by adjusting park management. However, addressing close links between livelihoods, natural capital and poverty remains a fundamental challenge in East Africa's forest conservation efforts.

Protected areas: mixed success in conserving East Africa's evergreen forests.

Directory of Open Access Journals (Sweden)

Marion Pfeifer

Full Text Available In East Africa, human population growth and demands for natural resources cause forest loss contributing to increased carbon emissions and reduced biodiversity. Protected Areas (PAs are intended to conserve habitats and species. Variability in PA effectiveness and 'leakage' (here defined as displacement of deforestation may lead to different trends in forest loss within, and adjacent to, existing PAs. Here, we quantify spatial variation in trends of evergreen forest coverage in East Africa between 2001 and 2009, and test for correlations with forest accessibility and environmental drivers. We investigate PA effectiveness at local, landscape and national scales, comparing rates of deforestation within park boundaries with those detected in park buffer zones and in unprotected land more generally. Background forest loss (BFL was estimated at -9.3% (17,167 km(2, but varied between countries (range: -0.9% to -85.7%; note: no BFL in South Sudan. We document high variability in PA effectiveness within and between PA categories. The most successful PAs were National Parks, although only 26 out of 48 parks increased or maintained their forest area (i.e. Effective parks. Forest Reserves (Ineffective parks, i.e. parks that lose forest from within boundaries: 204 out of 337, Nature Reserves (six out of 12 and Game Parks (24 out of 26 were more likely to lose forest cover. Forest loss in buffer zones around PAs exceeded background forest loss, in some areas indicating leakage driven by Effective National Parks. Human pressure, forest accessibility, protection status, distance to fires and long-term annual rainfall were highly significant drivers of forest loss in East Africa. Some of these factors can be addressed by adjusting park management. However, addressing close links between livelihoods, natural capital and poverty remains a fundamental challenge in East Africa's forest conservation efforts.

Heterotopic gastric mucosa involving the gallbladder and biliary tree

Energy Technology Data Exchange (ETDEWEB)

Madrid, Carmen; Berrocal, Teresa; Gorospe, Luis; Prieto, Consuelo [Department of Paediatric Radiology, Hospital Infantil ' ' La Paz' ' , Paseo de la Castellana 261, 28046 Madrid (Spain); Gamez, Manuel [Department of Paediatric Surgery, Hospital Infantil ' ' La Paz' ' , Madrid (Spain)

2003-02-01

A case of heterotopic gastric mucosa in the common bile duct, cystic duct and gallbladder is reported in a 3-year-old girl with abdominal pain and jaundice. Abdominal US and CT showed dilatation of the biliary tree and a well-defined mass in the common bile duct that narrowed its lumen. The gallbladder was contracted in both examinations. The common bile duct and the gallbladder were resected and a choledochojejunostomy was performed. Although gastric heterotopy has been described throughout the entire length of the gastrointestinal tract, it is a very uncommon finding in the gallbladder and extremely rare in the biliary tree. A firm diagnosis of gastric heterotopia is based on the presence of fundal mucosa replete with parietal and chief cells. To our knowledge, this is the fifth reported case of heterotopic gastric tissue within the common bile duct, and the first to describe the US and CT findings. A relevant literature review and brief outline of the histological and radiological features are included in the discussion. (orig.)

Heterotopic gastric mucosa involving the gallbladder and biliary tree

International Nuclear Information System (INIS)

Madrid, Carmen; Berrocal, Teresa; Gorospe, Luis; Prieto, Consuelo; Gamez, Manuel

2003-01-01

A case of heterotopic gastric mucosa in the common bile duct, cystic duct and gallbladder is reported in a 3-year-old girl with abdominal pain and jaundice. Abdominal US and CT showed dilatation of the biliary tree and a well-defined mass in the common bile duct that narrowed its lumen. The gallbladder was contracted in both examinations. The common bile duct and the gallbladder were resected and a choledochojejunostomy was performed. Although gastric heterotopy has been described throughout the entire length of the gastrointestinal tract, it is a very uncommon finding in the gallbladder and extremely rare in the biliary tree. A firm diagnosis of gastric heterotopia is based on the presence of fundal mucosa replete with parietal and chief cells. To our knowledge, this is the fifth reported case of heterotopic gastric tissue within the common bile duct, and the first to describe the US and CT findings. A relevant literature review and brief outline of the histological and radiological features are included in the discussion. (orig.)

Spectra of chemical trees

International Nuclear Information System (INIS)

Balasubramanian, K.

1982-01-01

A method is developed for obtaining the spectra of trees of NMR and chemical interests. The characteristic polynomials of branched trees can be obtained in terms of the characteristic polynomials of unbranched trees and branches by pruning the tree at the joints. The unbranched trees can also be broken down further until a tree containing just two vertices is obtained. The effectively reduces the order of the secular determinant of the tree used at the beginning to determinants of orders atmost equal to the number of vertices in the branch containing the largest number of vertices. An illustrative example of a NMR graph is given for which the 22 x 22 secular determinant is reduced to determinants of orders atmost 4 x 4 in just the second step of the algorithm. The tree pruning algorithm can be applied even to trees with no symmetry elements and such a factoring can be achieved. Methods developed here can be elegantly used to find if two trees are cospectral and to construct cospectral trees

[Effects of simulated nitrogen deposition on soil microbial biomass carbon and nitrogen in natural evergreen broad-leaved forest in the Rainy Area of West China].

Science.gov (United States)

Zhou, Shi Xing; Zou, Cheng; Xiao, Yong Xiang; Xiang, Yuan Bin; Han, Bo Han; Tang, Jian Dong; Luo, Chao; Huang, Cong de

2017-01-01

To understand the effects of increasing nitrogen deposition on soil microbial biomass carbon (MBC) and nitrogen(MBN), an in situ experiment was conducted in a natural evergreen broad-leaved forest in Ya'an City, Sichuan Province. Four levels of nitrogen deposition were set: i.e., control (CK, 0 g N·m -2 ·a -1 ), low nitrogen (L, 5 g N·m -2 ·a -1 ), medium nitrogen (M, 15 g N·m -2 ·a -1 ), and high nitrogen (H, 30 g N·m -2 ·a -1 ). The results indicated that nitrogen deposition significantly decreased MBC and MBN in the 0-10 cm soil layer, and as N de-position increased, the inhibition effect was enhanced. L and M treatments had no significant effect on MBC and MBN in the 10-20 cm soil layer, while H treatment significantly reduced. The influence of N deposition on MBC and MBN was weakened with the increase of soil depth. MBC and MBN had obvious seasonal dynamic, which were highest in autumn and lowest in summer both in the 0-10 and 10-20 cm soil layers. The fluctuation ranges of soil microbial biomass C/N were respectively 10.58-11.19 and 9.62-12.20 in the 0-10 cm and 10-20 cm soil layers, which indicated that the fungi hold advantage in the soil microbial community in this natural evergreen broad-leaved forest.

MeshTree: A Delay optimised Overlay Multicast Tree Building Protocol

OpenAIRE

Tan, Su-Wei; Waters, A. Gill; Crawford, John

2005-01-01

We study decentralised low delay degree-constrained overlay multicast tree construction for single source real-time applications. This optimisation problem is NP-hard even if computed centrally. We identify two problems in traditional distributed solutions, namely the greedy problem and delay-cost trade-off. By offering solutions to these problems, we propose a new self-organising distributed tree building protocol called MeshTree. The main idea is to embed the delivery tree in a degree-bound...

Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

Science.gov (United States)

Mai, Uyen; Sayyari, Erfan; Mirarab, Siavash

2017-01-01

Phylogenetic trees inferred using commonly-used models of sequence evolution are unrooted, but the root position matters both for interpretation and downstream applications. This issue has been long recognized; however, whether the potential for discordance between the species tree and gene trees impacts methods of rooting a phylogenetic tree has not been extensively studied. In this paper, we introduce a new method of rooting a tree based on its branch length distribution; our method, which minimizes the variance of root to tip distances, is inspired by the traditional midpoint rerooting and is justified when deviations from the strict molecular clock are random. Like midpoint rerooting, the method can be implemented in a linear time algorithm. In extensive simulations that consider discordance between gene trees and the species tree, we show that the new method is more accurate than midpoint rerooting, but its relative accuracy compared to using outgroups to root gene trees depends on the size of the dataset and levels of deviations from the strict clock. We show high levels of error for all methods of rooting estimated gene trees due to factors that include effects of gene tree discordance, deviations from the clock, and gene tree estimation error. Our simulations, however, did not reveal significant differences between two equivalent methods for species tree estimation that use rooted and unrooted input, namely, STAR and NJst. Nevertheless, our results point to limitations of existing scalable rooting methods.

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Indian Academy of Sciences (India)

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is a large evergreen tree with lush green handsome canopy. Leaves are simple, large (25-35 cm long;. 12-14 cm broad) thick, leathery, broad at the apex and narrow towards base. Flowers are large and attractive, but emit unpleasant foetid smell. They appear in small numbers on erect terminal clusters and open at night.

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Indian Academy of Sciences (India)

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Clausena anisata (Willd.) Hook.f. ex Benth. (Syn. C.dentata (Willd.) Roemer) – Black Currant. Grape Lime of the family Rutaceae is a small aromatic evergreen tree. Leaves are odd-pinnate with elliptic-ovate and oblique leaflets. Inflorescence is a raceme and flowers are greenish-white, and. 4-merous. Fruit is an ovoid small ...

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Indian Academy of Sciences (India)

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of Myrtacea is a large evergreen tree with spreading branches. Leaves are simple, rather elongated and shiny. Inflorescences appear at the branch ends. Flowers are fragrant and showy with numerous exserted stamens. Fruits that bear a crown of persistent sepals are fleshy, globose and 3-4cm across with one or two large ...

Trinidad Reservoir Salvage Archaeology, 1972.

Science.gov (United States)

1974-09-30

Components:. Acer glabrum, Alnus tennuifolia, BlepharoneUron tricholepis, Ceano- thus fendlerif Chamabati aria Millef aim, Festuca arizonica , Holodiscus...southern part), !j. occi- dentalis, Orvzopsis hymeihiodes, Purshia tridentata, Quercus emorvi, _q- gambelii, _q. grisea, _q. undulata, Sporobolus...evergreen trees Dominants: Corkbark fir (Abies lasiocarpa var. arizonica ) Engelmann spruce (Picea engel- mannii) Other Components: Abies lasiocarpa, Acer

On the issue of drought-tolerant ornamental woody plants the Black Sea coast (near Sochi

Directory of Open Access Journals (Sweden)

Karpun Yuriy Nikolaevich

2017-12-01

Full Text Available The summer-autumn drought, when rainfall in July - September, less than 200 mm, a significant limiting factor for ornamental woody plants of the Black Sea coast of the Caucasus. In the region under dry periods are irregular, the study of their impact on plants is problematic and delayed for many years. The last drought was in 2015, when the three months fell only 87 mm of rainfall. In the last days of the dry period were examined 501 views and intraspecific taxa belonging to 112 genera, bushy evergreen shrubs and trees, as the most vulnerable. Evaluation of drought resistance was evaluated according to our 3-point system, and the results were analyzed in the context of consolidated floristic regions. The results showed adequate drought tolerance, not less than 65 %, cultivated in the region of evergreen shrubs and bushy trees mainly from East Asia and the Mediterranean. Among the species that are recommended for mass plantings, for the pre-emptive use of landscaping and street-resistant plants 67-80 %. All this ensures stability and high decorative plants ofSochi city.

TreePlus: interactive exploration of networks with enhanced tree layouts.

Science.gov (United States)

Lee, Bongshin; Parr, Cynthia S; Plaisant, Catherine; Bederson, Benjamin B; Veksler, Vladislav D; Gray, Wayne D; Kotfila, Christopher

2006-01-01

Despite extensive research, it is still difficult to produce effective interactive layouts for large graphs. Dense layout and occlusion make food webs, ontologies, and social networks difficult to understand and interact with. We propose a new interactive Visual Analytics component called TreePlus that is based on a tree-style layout. TreePlus reveals the missing graph structure with visualization and interaction while maintaining good readability. To support exploration of the local structure of the graph and gathering of information from the extensive reading of labels, we use a guiding metaphor of "Plant a seed and watch it grow." It allows users to start with a node and expand the graph as needed, which complements the classic overview techniques that can be effective at (but often limited to) revealing clusters. We describe our design goals, describe the interface, and report on a controlled user study with 28 participants comparing TreePlus with a traditional graph interface for six tasks. In general, the advantage of TreePlus over the traditional interface increased as the density of the displayed data increased. Participants also reported higher levels of confidence in their answers with TreePlus and most of them preferred TreePlus.

Refining discordant gene trees.

Science.gov (United States)

Górecki, Pawel; Eulenstein, Oliver

2014-01-01

Evolutionary studies are complicated by discordance between gene trees and the species tree in which they evolved. Dealing with discordant trees often relies on comparison costs between gene and species trees, including the well-established Robinson-Foulds, gene duplication, and deep coalescence costs. While these costs have provided credible results for binary rooted gene trees, corresponding cost definitions for non-binary unrooted gene trees, which are frequently occurring in practice, are challenged by biological realism. We propose a natural extension of the well-established costs for comparing unrooted and non-binary gene trees with rooted binary species trees using a binary refinement model. For the duplication cost we describe an efficient algorithm that is based on a linear time reduction and also computes an optimal rooted binary refinement of the given gene tree. Finally, we show that similar reductions lead to solutions for computing the deep coalescence and the Robinson-Foulds costs. Our binary refinement of Robinson-Foulds, gene duplication, and deep coalescence costs for unrooted and non-binary gene trees together with the linear time reductions provided here for computing these costs significantly extends the range of trees that can be incorporated into approaches dealing with discordance.

Altered dynamics of broad-leaved tree species in a Chinese subtropical montane mixed forest: the role of an anomalous extreme 2008 ice storm episode.

Science.gov (United States)

Ge, Jielin; Xiong, Gaoming; Wang, Zhixian; Zhang, Mi; Zhao, Changming; Shen, Guozhen; Xu, Wenting; Xie, Zongqiang

2015-04-01

Extreme climatic events can trigger gradual or abrupt shifts in forest ecosystems via the reduction or elimination of foundation species. However, the impacts of these events on foundation species' demography and forest dynamics remain poorly understood. Here we quantified dynamics for both evergreen and deciduous broad-leaved species groups, utilizing a monitoring permanent plot in a subtropical montane mixed forest in central China from 2001 to 2010 with particular relevance to the anomalous 2008 ice storm episode. We found that both species groups showed limited floristic alterations over the study period. For each species group, size distribution of dead individuals approximated a roughly irregular and flat shape prior to the ice storm and resembled an inverse J-shaped distribution after the ice storm. Furthermore, patterns of mortality and recruitment displayed disequilibrium behaviors with mortality exceeding recruitment for both species groups following the ice storm. Deciduous broad-leaved species group accelerated overall diameter growth, but the ice storm reduced evergreen small-sized diameter growth. We concluded that evergreen broad-leaved species were more susceptible to ice storms than deciduous broad-leaved species, and ice storm events, which may become more frequent with climate change, might potentially threaten the perpetuity of evergreen-dominated broad-leaved forests in this subtropical region in the long term. These results underscore the importance of long-term monitoring that is indispensible to elucidate causal links between forest dynamics and climatic perturbations.

Simple street tree sampling

Science.gov (United States)

David J. Nowak; Jeffrey T. Walton; James Baldwin; Jerry. Bond

2015-01-01

Information on street trees is critical for management of this important resource. Sampling of street tree populations provides an efficient means to obtain street tree population information. Long-term repeat measures of street tree samples supply additional information on street tree changes and can be used to report damages from catastrophic events. Analyses of...

TreeFam: a curated database of phylogenetic trees of animal gene families

DEFF Research Database (Denmark)

Li, Heng; Coghlan, Avril; Ruan, Jue

2006-01-01

TreeFam is a database of phylogenetic trees of gene families found in animals. It aims to develop a curated resource that presents the accurate evolutionary history of all animal gene families, as well as reliable ortholog and paralog assignments. Curated families are being added progressively......, based on seed alignments and trees in a similar fashion to Pfam. Release 1.1 of TreeFam contains curated trees for 690 families and automatically generated trees for another 11 646 families. These represent over 128 000 genes from nine fully sequenced animal genomes and over 45 000 other animal proteins...

Reconstructed tree fern Alethopteris zeilleri (Carboniferous, Medullosales)

Energy Technology Data Exchange (ETDEWEB)

Zodrow, Erwin L. [Department of Earth Sciences, University College of Cape Breton, Sydney, Nova, Scotia (Canada B1P 6L2)

2007-01-02

From a smaller open-pit area in the roof shale of the basal Cantabrian coal seam in Sydney Coalfield, Cape Breton Island, Nova Scotia, Canada, large amounts of the pteridosperm foliage Alethopteris zeilleri (Ragot) were found. This foliage is associated with abundant, naked medullosalean axes and dichotomies of varying sizes, up to 0.80-m long, cauline structures 0.90 m and 1.3 m long, detached ovules assigned to Pachytesta incrassata Brongniart, rare male-pollen organs of the type Dolerotheca Halle, rooted tree ferns in life position, and one specimen each of a juvenile medullosalean frond and root mantle. The fossils are compression/impression-preserved, and the foliage yielded thickly cutinized cuticles with unoriented cells (57-103 by 27-57 {mu}m) in intercostal fields. Ultimate rachises, and abaxial surfaces (excluding costal fields) show a mixture of simple and complexly-branched trichomes, and two different structural bases. These, together with fractal dimensionality of curvatures of anticlinal walls in intercostal fields, have taxonomic potential for alethopterids. The finds suggest reconstructing A. zeilleri (Ragot) as a tree, 5-7 m high, that bore both P. incrassata Brongniart and Dolerotheca-type fructifications. Its habitat was low-land coastal plains in the Pennsylvanian coal swamps of ancestral Sydney Coalfield. (author)

Estimating the global conservation status of more than 15,000 Amazonian tree species

OpenAIRE

ter Steege, H.; et al., [Unknown; Duivenvoorden, J.F.

2015-01-01

Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened ...

Tree-space statistics and approximations for large-scale analysis of anatomical trees

DEFF Research Database (Denmark)

Feragen, Aasa; Owen, Megan; Petersen, Jens

2013-01-01

parametrize the relevant parts of tree-space well. Using the developed approximate statistics, we illustrate how the structure and geometry of airway trees vary across a population and show that airway trees with Chronic Obstructive Pulmonary Disease come from a different distribution in tree-space than...

77 FR 58578 - Certain Sintered Rare Earth Magnets, Methods of Making Same and Products Containing Same...

Science.gov (United States)

2012-09-21

... Electronics, LLC, 2220 Colorado Ave., Santa Monica, CA 90404 Monster Cable Products, Inc., 455 Valley Dr... Electronics, Inc., 14881 Evergreen Ave., Clearwater, FL 33762 TELEX Communications, Inc., 12000 Portland Ave... Technology, Inc., 5835 Shugart Lane, Traverse City, MI 49684 Nexteer Automotive Corp., 3900 East Holland Rd...

Relating phylogenetic trees to transmission trees of infectious disease outbreaks.

Science.gov (United States)

Ypma, Rolf J F; van Ballegooijen, W Marijn; Wallinga, Jacco

2013-11-01

Transmission events are the fundamental building blocks of the dynamics of any infectious disease. Much about the epidemiology of a disease can be learned when these individual transmission events are known or can be estimated. Such estimations are difficult and generally feasible only when detailed epidemiological data are available. The genealogy estimated from genetic sequences of sampled pathogens is another rich source of information on transmission history. Optimal inference of transmission events calls for the combination of genetic data and epidemiological data into one joint analysis. A key difficulty is that the transmission tree, which describes the transmission events between infected hosts, differs from the phylogenetic tree, which describes the ancestral relationships between pathogens sampled from these hosts. The trees differ both in timing of the internal nodes and in topology. These differences become more pronounced when a higher fraction of infected hosts is sampled. We show how the phylogenetic tree of sampled pathogens is related to the transmission tree of an outbreak of an infectious disease, by the within-host dynamics of pathogens. We provide a statistical framework to infer key epidemiological and mutational parameters by simultaneously estimating the phylogenetic tree and the transmission tree. We test the approach using simulations and illustrate its use on an outbreak of foot-and-mouth disease. The approach unifies existing methods in the emerging field of phylodynamics with transmission tree reconstruction methods that are used in infectious disease epidemiology.

Decision-Tree Program

Science.gov (United States)

Buntine, Wray

1994-01-01

IND computer program introduces Bayesian and Markov/maximum-likelihood (MML) methods and more-sophisticated methods of searching in growing trees. Produces more-accurate class-probability estimates important in applications like diagnosis. Provides range of features and styles with convenience for casual user, fine-tuning for advanced user or for those interested in research. Consists of four basic kinds of routines: data-manipulation, tree-generation, tree-testing, and tree-display. Written in C language.

Tree-growth analyses to estimate tree species' drought tolerance.

Science.gov (United States)

Eilmann, Britta; Rigling, Andreas

2012-02-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree species' potential for surviving future aggravated environmental conditions is rather demanding. The aim of this study was to find a tree-ring-based method suitable for identifying very drought-tolerant species, particularly potential substitute species for Scots pine (Pinus sylvestris L.) in Valais. In this inner-Alpine valley, Scots pine used to be the dominating species for dry forests, but today it suffers from high drought-induced mortality. We investigate the growth response of two native tree species, Scots pine and European larch (Larix decidua Mill.), and two non-native species, black pine (Pinus nigra Arnold) and Douglas fir (Pseudotsuga menziesii Mirb. var. menziesii), to drought. This involved analysing how the radial increment of these species responded to increasing water shortage (abandonment of irrigation) and to increasingly frequent drought years. Black pine and Douglas fir are able to cope with drought better than Scots pine and larch, as they show relatively high radial growth even after irrigation has been stopped and a plastic growth response to drought years. European larch does not seem to be able to cope with these dry conditions as it lacks the ability to recover from drought years. The analysis of trees' short-term response to extreme climate events seems to be the most promising and suitable method for detecting how tolerant a tree species is towards drought. However, combining all the methods used in this study provides a complete picture of how water shortage could limit species.

Are trees long-lived?

Science.gov (United States)

Kevin T. Smith

2009-01-01

Trees and tree care can capture the best of people's motivations and intentions. Trees are living memorials that help communities heal at sites of national tragedy, such as Oklahoma City and the World Trade Center. We mark the places of important historical events by the trees that grew nearby even if the original tree, such as the Charter Oak in Connecticut or...

jfewr ©2016 - jfewr Publications

African Journals Online (AJOL)

umaru buba

The Nigeria-Cameroon chimpanzee has been classified on the red list of threatened ... the habitat, tree felling (4 segments; 19.1 %) of the habitat and Non Timber ... Uganda in the East to Mali and Senegal in the West ... of biotypes such as evergreen and semi-deciduous ..... on ripe fruits and only between 18 – 21 % of their.

Chapter 22. Rosaceous shrubs

Science.gov (United States)

Nancy L. Shaw; Stephen B. Monsen; Richard Stevens

2004-01-01

Important shrubs of the Rose Family (Rosaceae) in the Intermountain region are distributed from blackbrush and salt desert shrub communities through high elevation forests and meadows. Growth habits of this group vary from trailing brambles to upright shrubs and small trees. Some species are evergreen while others are deciduous. Many of these species are highly valued...

Pines

Science.gov (United States)

C. Plomion; D. Chagne; D. Pot; S. Kumar; P.L. Wilcox; R.D. Burdon; D. Prat; D.G. Peterson; J. Paiva; P. Chaumeil; G.G. Vendramin; F. Sebastiani; C.D. Nelson; C.S. Echt; O. Savolainen; T.L. Kubisiak; M.T. Cervera; N. de Maria; M.N. Islam-Faridi

2007-01-01

Pinus is the most important genus within the Family Pinaceae and also within the gymnosperms by the number of species (109 species recognized by Farjon 2001) and by its contribution to forest ecosystems. All pine species are evergreen trees or shrubs. They are widely distributed in the northern hemisphere, from tropical areas to northern areas in America and Eurasia....

External validation of a decision tree early warning score using only laboratory data

DEFF Research Database (Denmark)

Holm Atkins, Tara E; Öhman, Malin C; Brabrand, Mikkel

2018-01-01

INTRODUCTION: Early warning scores (EWS) have been developed to identify the degree of illness severity among acutely ill patients. One system, The Laboratory Decision Tree Early Warning Score (LDT-EWS) is wholly laboratory data based. Laboratory data was used in the development of a rare...... computerized method, developing a decision tree analysis. This article externally validates LDT-EWS, which is obligatory for an EWS before clinical use. METHOD: We conducted a retrospective review of prospectively collected data based on a time limited sample of all patients admitted through the medical......) and calibration (precision) as Hosmer-Lemeshow Goodness of fit test. RESULTS: A total of 5858 patients were admitted and 4902 included (83.7%). In-hospital mortality in our final dataset (n=4902) was 3.5%. Discriminatory power (95% CI), identifying in-hospital death was 0.809 (0.777-0.842). Calibration was good...

There's Life in Hazard Trees

Science.gov (United States)

Mary Torsello; Toni McLellan

The goals of hazard tree management programs are to maximize public safety and maintain a healthy sustainable tree resource. Although hazard tree management frequently targets removal of trees or parts of trees that attract wildlife, it can take into account a diversity of tree values. With just a little extra planning, hazard tree management can be highly beneficial...

Fast Tree: Computing Large Minimum-Evolution Trees with Profiles instead of a Distance Matrix

Energy Technology Data Exchange (ETDEWEB)

N. Price, Morgan; S. Dehal, Paramvir; P. Arkin, Adam

2009-07-31

Gene families are growing rapidly, but standard methods for inferring phylogenies do not scale to alignments with over 10,000 sequences. We present FastTree, a method for constructing large phylogenies and for estimating their reliability. Instead of storing a distance matrix, FastTree stores sequence profiles of internal nodes in the tree. FastTree uses these profiles to implement neighbor-joining and uses heuristics to quickly identify candidate joins. FastTree then uses nearest-neighbor interchanges to reduce the length of the tree. For an alignment with N sequences, L sites, and a different characters, a distance matrix requires O(N^2) space and O(N^2 L) time, but FastTree requires just O( NLa + N sqrt(N) ) memory and O( N sqrt(N) log(N) L a ) time. To estimate the tree's reliability, FastTree uses local bootstrapping, which gives another 100-fold speedup over a distance matrix. For example, FastTree computed a tree and support values for 158,022 distinct 16S ribosomal RNAs in 17 hours and 2.4 gigabytes of memory. Just computing pairwise Jukes-Cantor distances and storing them, without inferring a tree or bootstrapping, would require 17 hours and 50 gigabytes of memory. In simulations, FastTree was slightly more accurate than neighbor joining, BIONJ, or FastME; on genuine alignments, FastTree's topologies had higher likelihoods. FastTree is available at http://microbesonline.org/fasttree.

TreeRipper web application: towards a fully automated optical tree recognition software

Directory of Open Access Journals (Sweden)

Hughes Joseph

2011-05-01

Full Text Available Abstract Background Relationships between species, genes and genomes have been printed as trees for over a century. Whilst this may have been the best format for exchanging and sharing phylogenetic hypotheses during the 20th century, the worldwide web now provides faster and automated ways of transferring and sharing phylogenetic knowledge. However, novel software is needed to defrost these published phylogenies for the 21st century. Results TreeRipper is a simple website for the fully-automated recognition of multifurcating phylogenetic trees (http://linnaeus.zoology.gla.ac.uk/~jhughes/treeripper/. The program accepts a range of input image formats (PNG, JPG/JPEG or GIF. The underlying command line c++ program follows a number of cleaning steps to detect lines, remove node labels, patch-up broken lines and corners and detect line edges. The edge contour is then determined to detect the branch length, tip label positions and the topology of the tree. Optical Character Recognition (OCR is used to convert the tip labels into text with the freely available tesseract-ocr software. 32% of images meeting the prerequisites for TreeRipper were successfully recognised, the largest tree had 115 leaves. Conclusions Despite the diversity of ways phylogenies have been illustrated making the design of a fully automated tree recognition software difficult, TreeRipper is a step towards automating the digitization of past phylogenies. We also provide a dataset of 100 tree images and associated tree files for training and/or benchmarking future software. TreeRipper is an open source project licensed under the GNU General Public Licence v3.

MixtureTree annotator: a program for automatic colorization and visual annotation of MixtureTree.

Directory of Open Access Journals (Sweden)

Shu-Chuan Chen

Full Text Available The MixtureTree Annotator, written in JAVA, allows the user to automatically color any phylogenetic tree in Newick format generated from any phylogeny reconstruction program and output the Nexus file. By providing the ability to automatically color the tree by sequence name, the MixtureTree Annotator provides a unique advantage over any other programs which perform a similar function. In addition, the MixtureTree Annotator is the only package that can efficiently annotate the output produced by MixtureTree with mutation information and coalescent time information. In order to visualize the resulting output file, a modified version of FigTree is used. Certain popular methods, which lack good built-in visualization tools, for example, MEGA, Mesquite, PHY-FI, TreeView, treeGraph and Geneious, may give results with human errors due to either manually adding colors to each node or with other limitations, for example only using color based on a number, such as branch length, or by taxonomy. In addition to allowing the user to automatically color any given Newick tree by sequence name, the MixtureTree Annotator is the only method that allows the user to automatically annotate the resulting tree created by the MixtureTree program. The MixtureTree Annotator is fast and easy-to-use, while still allowing the user full control over the coloring and annotating process.

On Determining if Tree-based Networks Contain Fixed Trees.

Science.gov (United States)

Anaya, Maria; Anipchenko-Ulaj, Olga; Ashfaq, Aisha; Chiu, Joyce; Kaiser, Mahedi; Ohsawa, Max Shoji; Owen, Megan; Pavlechko, Ella; St John, Katherine; Suleria, Shivam; Thompson, Keith; Yap, Corrine

2016-05-01

We address an open question of Francis and Steel about phylogenetic networks and trees. They give a polynomial time algorithm to decide if a phylogenetic network, N, is tree-based and pose the problem: given a fixed tree T and network N, is N based on T? We show that it is [Formula: see text]-hard to decide, by reduction from 3-Dimensional Matching (3DM) and further that the problem is fixed-parameter tractable.

The effect of contaminated groundwater on tree growth: A tree-ring analysis

International Nuclear Information System (INIS)

LeBlanc, D.C.; Loehle, C.

1990-10-01

A study was conducted on the effect of contaminated groundwater seepage on tree growth downslope from F- and H-Area seepage basins of the Savannah River Site. Trees in wetlands along Four Mile Creek began to show localized stress and mortality in the late 1970s. Extreme winter temperatures and high rainfall were ruled out as potential causal factors of tree stress. Drought was shown to affect trees in both contaminated and uncontaminated zones, but trees in uncontaminated areas exhibit better recovery after drought than trees in contaminated areas. Pollution-mediated alteration of soil acidity and aluminum, sodium, and heavy metal concentrations likely acted to predispose trees to decline, with severe drought acting as the trigger for decline initiation and tree death. Thus, a moderate pollution loading, not sufficient to cause visible damage of itself, may create conditions in which sudden, severe decline could result from natural stresses. This mechanism of forest decline is common, and should be considered in evaluations of the impact of pollution on wetland forest systems. 28 refs., 4 figs., 6 tabs

SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.

Science.gov (United States)

Beccati, Alan; Gerken, Jan; Quast, Christian; Yilmaz, Pelin; Glöckner, Frank Oliver

2017-09-30

Phylogenetic trees are an important tool to study the evolutionary relationships among organisms. The huge amount of available taxa poses difficulties in their interactive visualization. This hampers the interaction with the users to provide feedback for the further improvement of the taxonomic framework. The SILVA Tree Viewer is a web application designed for visualizing large phylogenetic trees without requiring the download of any software tool or data files. The SILVA Tree Viewer is based on Web Geographic Information Systems (Web-GIS) technology with a PostgreSQL backend. It enables zoom and pan functionalities similar to Google Maps. The SILVA Tree Viewer enables access to two phylogenetic (guide) trees provided by the SILVA database: the SSU Ref NR99 inferred from high-quality, full-length small subunit sequences, clustered at 99% sequence identity and the LSU Ref inferred from high-quality, full-length large subunit sequences. The Tree Viewer provides tree navigation, search and browse tools as well as an interactive feedback system to collect any kinds of requests ranging from taxonomy to data curation and improving the tool itself.

Studies on the local evaluation of the effects of air pollution by biological index, interim report I. On the evaluation of air pollution by remote sensing

Energy Technology Data Exchange (ETDEWEB)

1973-12-01

The amount of arboreal activity locally affected by air pollution and numerical data obtained by transformation of aerial photography of local arboreal activity were compared to determine a biological air pollution index. The remote sensing technique used in Japan is described. The investigation was carried out in Sept. 1973 and Oct. 1972 in 16 districts of Kanagawa prefecture on three evergreen trees and three deciduous trees easily affected by air pollution. A noticeable correlation occurred between arboreal activity of zelkova, ginkgo, castanopsis, and mixed flora and the photographic density and their ratios.

D2-tree

DEFF Research Database (Denmark)

Brodal, Gerth Stølting; Sioutas, Spyros; Pantazos, Kostas

2015-01-01

We present a new overlay, called the Deterministic Decentralized tree (D2-tree). The D2-tree compares favorably to other overlays for the following reasons: (a) it provides matching and better complexities, which are deterministic for the supported operations; (b) the management of nodes (peers...

Dust collection capacity of plants growing in coal mining areas

International Nuclear Information System (INIS)

Maiti, S.K.

1993-01-01

Plant can act as living filter of dust pollution in coal mining areas, where the amount of suspended particulate matter and dust fall rate is very high. Therefore, plant species growing in coal mining areas are classified as evergreen or deciduous with simple and compound leaf basis. The dust arresting capacity of each leaf is measured and expressed in g/m 2 . The study indicated that evergreen plants with simple, pilose surface, like - Alstonia, Ficus cunea, F. benghalensis and Mangifera indica are good dust catcher than evergreen compound leaves of Cassia siamea, Acacia arabica and Leucaena leucocephala. Deciduous with simple leaves, such as Zizyphus mauritiana, F. religiosa, Psidium guyava are also good dust collectors. Suitable plant species also help in quick reclamation of mined out areas; one practical difficulty for establishment of trees as green belts or reclamation purpose, has been incidence of cattle grazing. This study suggested a systematic way of selecting plant species on the basis of their efficiency in dust control and resistance to cattle grazing. (author). 16 refs., 3 tabs

Tree felling 2014

CERN Multimedia

2014-01-01

With a view to creating new landscapes and making its population of trees safer and healthier, this winter CERN will complete the tree-felling campaign started in 2010.   Tree felling will take place between 15 and 22 November on the Swiss part of the Meyrin site. This work is being carried out above all for safety reasons. The trees to be cut down are at risk of falling as they are too old and too tall to withstand the wind. In addition, the roots of poplar trees are very powerful and spread widely, potentially damaging underground networks, pavements and roadways. Compensatory tree planting campaigns will take place in the future, subject to the availability of funding, with the aim of creating coherent landscapes while also respecting the functional constraints of the site. These matters are being considered in close collaboration with the Geneva nature and countryside directorate (Direction générale de la nature et du paysage, DGNP). GS-SE Group

Phylogenetic trees

OpenAIRE

Baños, Hector; Bushek, Nathaniel; Davidson, Ruth; Gross, Elizabeth; Harris, Pamela E.; Krone, Robert; Long, Colby; Stewart, Allen; Walker, Robert

2016-01-01

We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information on phylogenetic algebraic geometry and show how the package PhylogeneticTrees can be used to calculate a generating set for a phylogenetic ideal as well as a lower bound for its dimension. Finally, we show how methods within the package can be used to compute a generating set for the join of any two ideals.

Rare earths

Energy Technology Data Exchange (ETDEWEB)

Cranstone, D A

1979-01-01

Rare earth elements are commonly extracted from the minerals monazite, bastnaesite, and xenotine. New uses for these elements are constantly developing; they have found applications in glass polishing, television tube phosphors, high-strength low-alloy steels, magnets, catalysts, refractory ceramics, and hydrogen sponge alloys. In Canada, rare earths have been produced as byproducts of the uranium mining industry, but there was no production of rare earths in 1978 or 1979. The world sources of and markets for the rare earth elements are discussed.

Water stress strengthens mutualism among ants, trees, and scale insects.

Directory of Open Access Journals (Sweden)

Elizabeth G Pringle

2013-11-01

Full Text Available Abiotic environmental variables strongly affect the outcomes of species interactions. For example, mutualistic interactions between species are often stronger when resources are limited. The effect might be indirect: water stress on plants can lead to carbon stress, which could alter carbon-mediated plant mutualisms. In mutualistic ant-plant symbioses, plants host ant colonies that defend them against herbivores. Here we show that the partners' investments in a widespread ant-plant symbiosis increase with water stress across 26 sites along a Mesoamerican precipitation gradient. At lower precipitation levels, Cordia alliodora trees invest more carbon in Azteca ants via phloem-feeding scale insects that provide the ants with sugars, and the ants provide better defense of the carbon-producing leaves. Under water stress, the trees have smaller carbon pools. A model of the carbon trade-offs for the mutualistic partners shows that the observed strategies can arise from the carbon costs of rare but extreme events of herbivory in the rainy season. Thus, water limitation, together with the risk of herbivory, increases the strength of a carbon-based mutualism.

Water Stress Strengthens Mutualism Among Ants, Trees, and Scale Insects

Science.gov (United States)

Pringle, Elizabeth G.; Akçay, Erol; Raab, Ted K.; Dirzo, Rodolfo; Gordon, Deborah M.

2013-01-01

Abiotic environmental variables strongly affect the outcomes of species interactions. For example, mutualistic interactions between species are often stronger when resources are limited. The effect might be indirect: water stress on plants can lead to carbon stress, which could alter carbon-mediated plant mutualisms. In mutualistic ant–plant symbioses, plants host ant colonies that defend them against herbivores. Here we show that the partners' investments in a widespread ant–plant symbiosis increase with water stress across 26 sites along a Mesoamerican precipitation gradient. At lower precipitation levels, Cordia alliodora trees invest more carbon in Azteca ants via phloem-feeding scale insects that provide the ants with sugars, and the ants provide better defense of the carbon-producing leaves. Under water stress, the trees have smaller carbon pools. A model of the carbon trade-offs for the mutualistic partners shows that the observed strategies can arise from the carbon costs of rare but extreme events of herbivory in the rainy season. Thus, water limitation, together with the risk of herbivory, increases the strength of a carbon-based mutualism. PMID:24223521

Water stress strengthens mutualism among ants, trees, and scale insects.

Science.gov (United States)

Pringle, Elizabeth G; Akçay, Erol; Raab, Ted K; Dirzo, Rodolfo; Gordon, Deborah M

2013-11-01

Abiotic environmental variables strongly affect the outcomes of species interactions. For example, mutualistic interactions between species are often stronger when resources are limited. The effect might be indirect: water stress on plants can lead to carbon stress, which could alter carbon-mediated plant mutualisms. In mutualistic ant-plant symbioses, plants host ant colonies that defend them against herbivores. Here we show that the partners' investments in a widespread ant-plant symbiosis increase with water stress across 26 sites along a Mesoamerican precipitation gradient. At lower precipitation levels, Cordia alliodora trees invest more carbon in Azteca ants via phloem-feeding scale insects that provide the ants with sugars, and the ants provide better defense of the carbon-producing leaves. Under water stress, the trees have smaller carbon pools. A model of the carbon trade-offs for the mutualistic partners shows that the observed strategies can arise from the carbon costs of rare but extreme events of herbivory in the rainy season. Thus, water limitation, together with the risk of herbivory, increases the strength of a carbon-based mutualism.

Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

Science.gov (United States)

Allman, Elizabeth S; Degnan, James H; Rhodes, John A

2011-06-01

Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

The influence of canopy-layer composition on understory plant diversity in southern temperate forests

Directory of Open Access Journals (Sweden)

Luciana Mestre

2017-05-01

Full Text Available Background Understory plants represents the largest component of biodiversity in most forest ecosystems and plays a key role in forest functioning. Despite their importance, the influence of overstory-layer composition on understory plant diversity is relatively poorly understood within deciduous-evergreen broadleaved mixed forests. The aim of this work was to evaluate how tree overstory-layer composition influences on understory-layer diversity in three forest types (monospecific deciduous Nothofagus pumilio (Np, monospecific evergreen Nothofagus betuloides (Nb, and mixed N. pumilio-N. betuloides (M forests, comparing also between two geographical locations (coast and mountain to estimate differences at landscape level. Results We recorded 46 plant species: 4 ferns, 12 monocots, and 30 dicots. Canopy-layer composition influences the herb-layer structure and diversity in two different ways: while mixed forests have greater similarity to evergreen forests in the understory structural features, deciduous and mixed were similar in terms of the specific composition of plant assemblage. Deciduous pure stands were the most diverse, meanwhile evergreen stands were least diverse. Lack of exclusive species of mixed forest could represent a transition where evergreen and deciduous communities meet and integrate. Moreover, landscape has a major influence on the structure, diversity and richness of understory vegetation of pure and mixed forests likely associated to the magnitude and frequency of natural disturbances, where mountain forest not only had highest herb-layer diversity but also more exclusive species. Conclusions Our study suggests that mixed Nothofagus forest supports coexistence of both pure deciduous and pure evergreen understory plant species and different assemblages in coastal and mountain sites. Maintaining the mixture of canopy patch types within mixed stands will be important for conserving the natural patterns of understory plant

Tundra shrubification and tree-line advance amplify arctic climate warming: results from an individual-based dynamic vegetation model

Science.gov (United States)

Zhang, Wenxin; Miller, Paul A.; Smith, Benjamin; Wania, Rita; Koenigk, Torben; Döscher, Ralf

2013-09-01

One major challenge to the improvement of regional climate scenarios for the northern high latitudes is to understand land surface feedbacks associated with vegetation shifts and ecosystem biogeochemical cycling. We employed a customized, Arctic version of the individual-based dynamic vegetation model LPJ-GUESS to simulate the dynamics of upland and wetland ecosystems under a regional climate model-downscaled future climate projection for the Arctic and Subarctic. The simulated vegetation distribution (1961-1990) agreed well with a composite map of actual arctic vegetation. In the future (2051-2080), a poleward advance of the forest-tundra boundary, an expansion of tall shrub tundra, and a dominance shift from deciduous to evergreen boreal conifer forest over northern Eurasia were simulated. Ecosystems continued to sink carbon for the next few decades, although the size of these sinks diminished by the late 21st century. Hot spots of increased CH4 emission were identified in the peatlands near Hudson Bay and western Siberia. In terms of their net impact on regional climate forcing, positive feedbacks associated with the negative effects of tree-line, shrub cover and forest phenology changes on snow-season albedo, as well as the larger sources of CH4, may potentially dominate over negative feedbacks due to increased carbon sequestration and increased latent heat flux.

Changes in radiocesium contamination from Fukushima in foliar parts of 10 common tree species in Japan between 2011 and 2013.

Science.gov (United States)

Yoshihara, Toshihiro; Matsumura, Hideyuki; Tsuzaki, Masaharu; Wakamatsu, Takashi; Kobayashi, Takuya; Hashida, Shin-Nosuke; Nagaoka, Toru; Goto, Fumiyuki

2014-12-01

Yearly changes in radiocesium ((137)Cs) contamination, primarily due to the Fukushima accident of March 2011, were observed in the foliar parts of 10 common woody species in Japan (Chamaecyparis obtusa, Cedrus deodara, Pinus densiflora, Cryptomeria japonica, Phyllostachys pubescens, Cinnamomum camphora, Metasequoia glyptostroboides, Prunus × yedoensis, Acer buergerianum, and Aesculus hippocastanum). The samples were obtained from Abiko (approximately 200 km SSW of the Fukushima Dai-ichi Nuclear Power Plant) during each growing season between 2011 and 2013, and the foliar parts were examined based on their year of expansion and location in each trees. The radiocesium concentrations generally decreased with time; however, the concentrations and rates of decrease varied among species, age of foliar parts, and locations. The radiocesium concentrations in the 2012 current-year foliar parts were 29%-220% of those from 2011, while those from 2013 fell to between 14% and 42% of the 2011 values. The net decontamination in the foliage was higher in evergreen species than in deciduous species. The radiocesium concentrations in the upper foliar parts were higher than those in the lower parts particularly in C. japonica. In addition, the radiocesium concentrations were higher in the current-year foliar parts than in the 1-year-old foliar parts, particularly in 2013. Thus, the influence of the direct deposition of the fallout was reduced with time, and the translocation ability of radiocesium from old to new tissues became more influential. Similar to the behavior of potassium in trees, Cs redistribution probably occurred primarily due to internal nutrient translocation mechanisms. Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.

Covering tree with stars

DEFF Research Database (Denmark)

Baumbach, Jan; Guo, Jiong; Ibragimov, Rashid

2015-01-01

We study the tree edit distance problem with edge deletions and edge insertions as edit operations. We reformulate a special case of this problem as Covering Tree with Stars (CTS): given a tree T and a set of stars, can we connect the stars in by adding edges between them such that the resulting...... tree is isomorphic to T? We prove that in the general setting, CST is NP-complete, which implies that the tree edit distance considered here is also NP-hard, even when both input trees having diameters bounded by 10. We also show that, when the number of distinct stars is bounded by a constant k, CTS...

Trees in the city: valuing street trees in Portland, Oregon

Science.gov (United States)

G.H. Donovan; D.T. Butry

2010-01-01

We use a hedonic price model to simultaneously estimate the effects of street trees on the sales price and the time-on-market (TOM) of houses in Portland. Oregon. On average, street trees add $8,870 to sales price and reduce TOM by 1.7 days. In addition, we found that the benefits of street trees spill over to neighboring houses. Because the provision and maintenance...

Urban tree growth modeling

Science.gov (United States)

E. Gregory McPherson; Paula J. Peper

2012-01-01

This paper describes three long-term tree growth studies conducted to evaluate tree performance because repeated measurements of the same trees produce critical data for growth model calibration and validation. Several empirical and process-based approaches to modeling tree growth are reviewed. Modeling is more advanced in the fields of forestry and...

Electron Tree

DEFF Research Database (Denmark)

Appelt, Ane L; Rønde, Heidi S

2013-01-01

The photo shows a close-up of a Lichtenberg figure – popularly called an “electron tree” – produced in a cylinder of polymethyl methacrylate (PMMA). Electron trees are created by irradiating a suitable insulating material, in this case PMMA, with an intense high energy electron beam. Upon discharge......, during dielectric breakdown in the material, the electrons generate branching chains of fractures on leaving the PMMA, producing the tree pattern seen. To be able to create electron trees with a clinical linear accelerator, one needs to access the primary electron beam used for photon treatments. We...... appropriated a linac that was being decommissioned in our department and dismantled the head to circumvent the target and ion chambers. This is one of 24 electron trees produced before we had to stop the fun and allow the rest of the accelerator to be disassembled....

Classification and regression trees

CERN Document Server

Breiman, Leo; Olshen, Richard A; Stone, Charles J

1984-01-01

The methodology used to construct tree structured rules is the focus of this monograph. Unlike many other statistical procedures, which moved from pencil and paper to calculators, this text's use of trees was unthinkable before computers. Both the practical and theoretical sides have been developed in the authors' study of tree methods. Classification and Regression Trees reflects these two sides, covering the use of trees as a data analysis method, and in a more mathematical framework, proving some of their fundamental properties.

Potential of fodder tree/shrub legumes as a feed resource for dry season supplementation of smallholder ruminant animals

International Nuclear Information System (INIS)

Simbaya, J.

2002-01-01

Fodder tree/shrub legumes have the potential for alleviating some of the feed shortages and nutritional deficiencies experienced in the dry season on smallholder farms. Zambia has a wide range of naturally occurring tree/shrub species that can be used as fodder for ruminants. Over the years a number of trees have been selected for their agronomic qualities and are currently being used in arable farming systems to promote soil fertility and erosion control. There is a need to evaluate them for use as fodder for ruminants in the dry season. Because of their high content of protein, minerals and vitamins and availability in the dry season, fodder tree/shrub legumes have the capacity to complement the feeding of crop-residues and natural pastures. Tree/shrub legumes also have other advantages in that they are available on-farm and can also be used as a source of food, timber and medicines at village level. Being deep rooted, fodder trees are rarely affected by seasonal climatic changes. The main limitation to their use as a feed resource for ruminants is the high tannin content which may have detrimental effects on the performance of animals. A number of techniques including, wilting, sun-drying, treatment with chemicals and ammoniation have been developed to minimize their adverse effects. Controlled intake through stall feeding or mixing of tree/shrub fodder with basal diets could also be used to mitigate their toxic effects. Research is currently under way to establish rumen microbes that have capacity to detoxify tannins. To promote increased use of fodder trees on smallholder farms, farmers must be provided with information on the good quality fodder trees and the approaches to effectively utilise them. They should also be encouraged to start planting fodder trees in their food crop farming systems or establishing fodder gardens on fallow lands. (author)

FB-Tree: A B+-Tree for Flash-Based SSDs

DEFF Research Database (Denmark)

Jørgensen, Martin V.; Rasmussen, René B.; Saltenis, Simonas

2011-01-01

Due to their many advantages, flash-based SSDs (Solid-State Drives) have become a mainstream alternative to magnetic disks for database servers. Nevertheless, database systems, designed and optimized for magnetic disks, still do not fully exploit all the benefits of the new technology. We propose....... As a consequence, the FB-tree outperforms a regular B+-tree in all scenarios tested. For instance, the throughput of a random workload of 75% updates increases by a factor of three using only two times the space of the B+-tree....

Benefit-based tree valuation

Science.gov (United States)

E.G. McPherson

2007-01-01

Benefit-based tree valuation provides alternative estimates of the fair and reasonable value of trees while illustrating the relative contribution of different benefit types. This study compared estimates of tree value obtained using cost- and benefit-based approaches. The cost-based approach used the Council of Landscape and Tree Appraisers trunk formula method, and...

Fragmentation of random trees

International Nuclear Information System (INIS)

Kalay, Z; Ben-Naim, E

2015-01-01

We study fragmentation of a random recursive tree into a forest by repeated removal of nodes. The initial tree consists of N nodes and it is generated by sequential addition of nodes with each new node attaching to a randomly-selected existing node. As nodes are removed from the tree, one at a time, the tree dissolves into an ensemble of separate trees, namely, a forest. We study statistical properties of trees and nodes in this heterogeneous forest, and find that the fraction of remaining nodes m characterizes the system in the limit N→∞. We obtain analytically the size density ϕ s of trees of size s. The size density has power-law tail ϕ s ∼s −α with exponent α=1+(1/m). Therefore, the tail becomes steeper as further nodes are removed, and the fragmentation process is unusual in that exponent α increases continuously with time. We also extend our analysis to the case where nodes are added as well as removed, and obtain the asymptotic size density for growing trees. (paper)