DNA Barcodes for Marine Biodiversity: Moving Fast Forward?

Directory of Open Access Journals (Sweden)

Adriana E. Radulovici

2010-03-01

Full Text Available ‘Biodiversity’ means the variety of life and it can be studied at different levels (genetic, species, ecosystem and scales (spatial and temporal. Last decades showed that marine biodiversity has been severely underestimated at all levels. In order to investigate diversity patterns and underlying processes, there is a need to know what species live in the marine environment. An emerging tool for species identification, DNA barcoding can reliably assign unknown specimens to known species, also flagging potential cryptic species and genetically distant populations. This paper will review the role of DNA barcoding for the study of marine biodiversity at the species level.

Biodiversity conservation should focus on no-take Marine Reserves: 94% of Marine Protected Areas allow fishing.

Science.gov (United States)

Costello, Mark J; Ballantine, Bill

2015-09-01

Conservation needs places where nature is left wild; but only a quarter of coastal countries have no-take Marine Reserves. 'Marine Protected Areas' (MPAs) have been used to indicate conservation progress but we found that 94% allow fishing and thus cannot protect all aspects of biodiversity. Biodiversity conservation should focus on Marine Reserves, not MPAs. Copyright © 2015 Elsevier Ltd. All rights reserved.

Enhanced biodiversity beyond marine reserve boundaries: the cup spillith over.

Science.gov (United States)

Russ, Garry R; Alcala, Angel C

2011-01-01

Overfishing can have detrimental effects on marine biodiversity and the structure of marine ecosystems. No-take marine reserves (NTMRs) are much advocated as a means of protecting biodiversity and ecosystem structure from overharvest. In contrast to terrestrial protected areas, NTMRs are not only expected to conserve or recover biodiversity and ecosystems within their boundaries, but also to enhance biodiversity beyond their boundaries by exporting species richness and more complex biological communities. Here we show that species richness of large predatory reef fish increased fourfold and 11-fold inside two Philippine no-take marine reserves over 14 and 25 years, respectively. Outside one reserve (Apo) the species richness also increased. This increase beyond the Apo reserve boundary was 78% higher closer to the boundary (200-250 m) than farther from it (250-500 m). The increase in richness beyond the boundary could not be explained by improvements over time in habitat or prey availability. Furthermore, community composition of predatory fish outside but close to (200-250 m) the Apo reserve became very similar to that inside the reserve over time, almost converging with it in multivariate space after 26 years of reserve protection. This is consistent with the suggestion that, as community composition inside Apo reserve increased in complexity, this complexity spilled over the boundary into nearby fished areas. Clearly, the spillover of species richness and community complexity is a direct consequence of the spillover of abundance of multiple species. However, this spillover of species richness and community complexity demonstrates an important benefit of biodiversity and ecosystem export from reserves, and it provides hope that reserves can help to reverse the decline of marine ecosystems and biodiversity.

Marine biodiversity of Aotearoa New Zealand.

Science.gov (United States)

Gordon, Dennis P; Beaumont, Jennifer; MacDiarmid, Alison; Robertson, Donald A; Ahyong, Shane T

2010-08-02

The marine-biodiversity assessment of New Zealand (Aotearoa as known to Māori) is confined to the 200 nautical-mile boundary of the Exclusive Economic Zone, which, at 4.2 million km(2), is one of the largest in the world. It spans 30 degrees of latitude and includes a high diversity of seafloor relief, including a trench 10 km deep. Much of this region remains unexplored biologically, especially the 50% of the EEZ deeper than 2,000 m. Knowledge of the marine biota is based on more than 200 years of marine exploration in the region. The major oceanographic data repository is the National Institute of Water and Atmospheric Research (NIWA), which is involved in several Census of Marine Life field projects and is the location of the Southwestern Pacific Regional OBIS Node; NIWA is also data manager and custodian for fisheries research data owned by the Ministry of Fisheries. Related data sources cover alien species, environmental measures, and historical information. Museum collections in New Zealand hold more than 800,000 registered lots representing several million specimens. During the past decade, 220 taxonomic specialists (85 marine) from 18 countries have been engaged in a project to review New Zealand's entire biodiversity. The above-mentioned marine information sources, published literature, and reports were scrutinized to give the results summarized here for the first time (current to 2010), including data on endemism and invasive species. There are 17,135 living species in the EEZ. This diversity includes 4,315 known undescribed species in collections. Species diversity for the most intensively studied phylum-level taxa (Porifera, Cnidaria, Mollusca, Brachiopoda, Bryozoa, Kinorhyncha, Echinodermata, Chordata) is more or less equivalent to that in the ERMS (European Register of Marine Species) region, which is 5.5 times larger in area than the New Zealand EEZ. The implication is that, when all other New Zealand phyla are equally well studied, total marine

Hopping hotspots: global shifts in marine biodiversity.

Science.gov (United States)

Renema, W; Bellwood, D R; Braga, J C; Bromfield, K; Hall, R; Johnson, K G; Lunt, P; Meyer, C P; McMonagle, L B; Morley, R J; O'Dea, A; Todd, J A; Wesselingh, F P; Wilson, M E J; Pandolfi, J M

2008-08-01

Hotspots of high species diversity are a prominent feature of modern global biodiversity patterns. Fossil and molecular evidence is starting to reveal the history of these hotspots. There have been at least three marine biodiversity hotspots during the past 50 million years. They have moved across almost half the globe, with their timing and locations coinciding with major tectonic events. The birth and death of successive hotspots highlights the link between environmental change and biodiversity patterns. The antiquity of the taxa in the modern Indo-Australian Archipelago hotspot emphasizes the role of pre-Pleistocene events in shaping modern diversity patterns.

Genomic Approaches in Marine Biodiversity and Aquaculture

Directory of Open Access Journals (Sweden)

Jorge A Huete-Pérez

2013-01-01

Full Text Available Recent advances in genomic and post-genomic technologies have now established the new standard in medical and biotechnological research. The introduction of next-generation sequencing, NGS,has resulted in the generation of thousands of genomes from all domains of life, including the genomes of complex uncultured microbial communities revealed through metagenomics. Although the application of genomics to marine biodiversity remains poorly developed overall, some noteworthy progress has been made in recent years. The genomes of various model marine organisms have been published and a few more are underway. In addition, the recent large-scale analysis of marine microbes, along with transcriptomic and proteomic approaches to the study of teleost fishes, mollusks and crustaceans, to mention a few, has provided a better understanding of phenotypic variability and functional genomics. The past few years have also seen advances in applications relevant to marine aquaculture and fisheries. In this review we introduce several examples of recent discoveries and progress made towards engendering genomic resources aimed at enhancing our understanding of marine biodiversity and promoting the development of aquaculture. Finally, we discuss the need for auspicious science policies to address challenges confronting smaller nations in the appropriate oversight of this growing domain as they strive to guarantee food security and conservation of their natural resources.

What is marine biodiversity? Towards common concepts and their implications for assessing biodiversity status

Directory of Open Access Journals (Sweden)

Sabine Cochrane

2016-12-01

Full Text Available ‘Biodiversity’ is one of the most common keywords used in environmental sciences, spanning from research to management, nature conservation and consultancy. Despite this, our understanding of the underlying concepts varies greatly, between and within disciplines as well as among the scientists themselves. Biodiversity can refer to descriptions or assessments of the status and condition of all or selected groups of organisms, from the genetic variability, to the species, populations, communities, and ecosystems. However, a concept of biodiversity also must encompass understanding the interactions and functions on all levels from individuals up to the whole ecosystem, including changes related to natural and anthropogenic environmental pressures. While biodiversity as such is an abstract and relative concept rooted in the spatial domain, it is central to most international, European and national governance initiatives aimed at protecting the marine environment. These rely on status assessments of biodiversity which typically require numerical targets and specific reference values, to allow comparison in space and/or time, often in association with some external structuring factors such as physical and biogeochemical conditions. Given that our ability to apply and interpret such assessments requires a solid conceptual understanding of marine biodiversity, here we define this and show how the abstract concept can and needs to be interpreted and subsequently applied in biodiversity assessments.

Marine Biodiversity in the Caribbean: Regional Estimates and Distribution Patterns

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Miloslavich, Patricia; Díaz, Juan Manuel; Klein, Eduardo; Alvarado, Juan José; Díaz, Cristina; Gobin, Judith; Escobar-Briones, Elva; Cruz-Motta, Juan José; Weil, Ernesto; Cortés, Jorge; Bastidas, Ana Carolina; Robertson, Ross; Zapata, Fernando; Martín, Alberto; Castillo, Julio; Kazandjian, Aniuska; Ortiz, Manuel

2010-01-01

This paper provides an analysis of the distribution patterns of marine biodiversity and summarizes the major activities of the Census of Marine Life program in the Caribbean region. The coastal Caribbean region is a large marine ecosystem (LME) characterized by coral reefs, mangroves, and seagrasses, but including other environments, such as sandy beaches and rocky shores. These tropical ecosystems incorporate a high diversity of associated flora and fauna, and the nations that border the Caribbean collectively encompass a major global marine biodiversity hot spot. We analyze the state of knowledge of marine biodiversity based on the geographic distribution of georeferenced species records and regional taxonomic lists. A total of 12,046 marine species are reported in this paper for the Caribbean region. These include representatives from 31 animal phyla, two plant phyla, one group of Chromista, and three groups of Protoctista. Sampling effort has been greatest in shallow, nearshore waters, where there is relatively good coverage of species records; offshore and deep environments have been less studied. Additionally, we found that the currently accepted classification of marine ecoregions of the Caribbean did not apply for the benthic distributions of five relatively well known taxonomic groups. Coastal species richness tends to concentrate along the Antillean arc (Cuba to the southernmost Antilles) and the northern coast of South America (Venezuela – Colombia), while no pattern can be observed in the deep sea with the available data. Several factors make it impossible to determine the extent to which these distribution patterns accurately reflect the true situation for marine biodiversity in general: (1) highly localized concentrations of collecting effort and a lack of collecting in many areas and ecosystems, (2) high variability among collecting methods, (3) limited taxonomic expertise for many groups, and (4) differing levels of activity in the study of

Marine biodiversity in the Caribbean: regional estimates and distribution patterns.

Directory of Open Access Journals (Sweden)

Patricia Miloslavich

2010-08-01

Full Text Available This paper provides an analysis of the distribution patterns of marine biodiversity and summarizes the major activities of the Census of Marine Life program in the Caribbean region. The coastal Caribbean region is a large marine ecosystem (LME characterized by coral reefs, mangroves, and seagrasses, but including other environments, such as sandy beaches and rocky shores. These tropical ecosystems incorporate a high diversity of associated flora and fauna, and the nations that border the Caribbean collectively encompass a major global marine biodiversity hot spot. We analyze the state of knowledge of marine biodiversity based on the geographic distribution of georeferenced species records and regional taxonomic lists. A total of 12,046 marine species are reported in this paper for the Caribbean region. These include representatives from 31 animal phyla, two plant phyla, one group of Chromista, and three groups of Protoctista. Sampling effort has been greatest in shallow, nearshore waters, where there is relatively good coverage of species records; offshore and deep environments have been less studied. Additionally, we found that the currently accepted classification of marine ecoregions of the Caribbean did not apply for the benthic distributions of five relatively well known taxonomic groups. Coastal species richness tends to concentrate along the Antillean arc (Cuba to the southernmost Antilles and the northern coast of South America (Venezuela-Colombia, while no pattern can be observed in the deep sea with the available data. Several factors make it impossible to determine the extent to which these distribution patterns accurately reflect the true situation for marine biodiversity in general: (1 highly localized concentrations of collecting effort and a lack of collecting in many areas and ecosystems, (2 high variability among collecting methods, (3 limited taxonomic expertise for many groups, and (4 differing levels of activity in the study

Reconciling biodiversity conservation and marine capture fisheries production

DEFF Research Database (Denmark)

Brander, Keith

2010-01-01

Pathways for moving towards the goals of biodiversity conservation and food security in terrestrial systems include the application of trait-based ecology to develop highly productive agroecosystems with less negative effects on biodiversity. Although marine ecosystems have been impacted by human...... activity over several centuries, the changes have been unintentional and undirected; we have not learned how to enhance food production from the sea and are reliant, as hunter-gatherers, on natural production. The goals of maximising fisheries production and maintaining biodiversity may be difficult...

A Demonstration Marine Biodiversity Observation Network (MBON): Understanding Marine Life and its Role in Maintaining Ecosystem Services

Science.gov (United States)

Muller-Karger, F. E.; Iken, K.; Miller, R. J.; Duffy, J. E.; Chavez, F.; Montes, E.

2016-02-01

The U.S. Federal government (NOAA, NASA, BOEM, and the Smithsonian Institution), academic researchers, and private partners are laying the foundation for a Marine Biodiversity Observation Network (MBON). The goals of the network are to: 1) Observe and understand life, from microbes to whales, in different coastal and continental shelf habitats; 2) Define an efficient set of observations required for implementing a useful MBON; 3) Develop technology for biodiversity assessments including emerging environmental DNA (eDNA), remote sensing, and image analysis methods to coordinate with classical sampling; 4) Integrate and synthesize information in coordination with the Integrated Ocean Observing System (IOOS), the international Group on Earth Observations Biodiversity Observation Network(GEO BON), and the Ocean Biogeographic Information System (OBIS) sponsored by UNESCO's Intergovernmental Oceanographic Commission (IOC); and 5) Understand the linkages between marine biodiversity, ecosystem processes, and the social-economic context of a region. Pilot projects have been implemented within three NOAA National Marine Sanctuaries (Florida Keys, Monterey Bay, and Channel Islands), the wider Santa Barbara Channel, in the Chukchi Sea, and through the Smithsonian's Tennenbaum Marine Observatories Network (TMON) at several sites in the U.S. and collaborating countries. Together, these MBON sites encompass a wide range of marine environments, including deep sea, continental shelves, and coastal habitats including estuaries, wetlands, and coral reefs. The present MBON partners are open to growth of the MBON through additional collaborations. Given these initiatives, GEO BON is proposing an MBON effort that spans from pole to pole, with a pathfinder effort among countries in the Americas. By specializing in coastal ecosystems—where marine biodiversity and people are concentrated and interact most—the MBON and TMON initiatives aim to provide policymakers with the science to

The Marine Food Chain in Relation to Biodiversity

Directory of Open Access Journals (Sweden)

Andrew R.G. Price

2001-01-01

Full Text Available Biodiversity provides “raw materials” for the food chain and seafood production, and also influences the capacity of ecosystems to perform these and other services. Harvested marine seafood species now exceed 100 million t y -1 and provide about 6% of all protein and 17% of animal protein consumed by humans. These resources include representatives from about nine biologically diverse groups of plants and animals. Fish account for most of the world’s marine catches, of which only 40 species are taken in abundance. Highest primary productivity and the richest fisheries are found within Exclusive Economic Zones (EEZ. This narrow strip (200 nautical mile/370 km wide is not only the site of coastal “food factories” but also the area associated with heaviest perturbation to the marine environment. Structural redundancy is evident in marine ecosystems, in that many species are interchangeable in the way they characterise assemblage composition. While there is probably functional redundancy within groups, the effects of species loss on ecosystem performance cannot be easily predicted. In particular, the degree to which biodiversity per se is needed for ecosystem services, including seafood/fishery production, is poorly understood. Many human activities, including unsustainable fishing and mariculture, lead to erosion of marine biodiversity. This can undermine the biophysical cornerstones of fisheries and have other undesirable environmental side effects. Of direct concern are “species effects”, in particular the removal of target and non-target fishery species, as well as conservationally important fauna. Equally disrupting but less immediate are “ecosystem effects”, such as fishing down the food web, following a shift from harvested species of high to low trophic level. Physical and biological disturbances from trawl nets and dynamite fishing on coral reefs can also severely impact ecosystem structure and function. �

"Conserving Marine Biodiversity in the Global Marine Commons: Co-evolution and Interaction with the Law of the Sea"

Directory of Open Access Journals (Sweden)

Robin Margaret Warner

2014-05-01

Full Text Available As global shipping intensifies and technological advances provide more opportunities to access the resources of the high seas and the deep seabed beyond national jurisdiction (ABNJ, the catalogue of threats to the marine environment and its biodiversity increase commensurately. Beyond these threats, new and emerging uses of ABNJ including more intrusive marine scientific research, bio-prospecting, deep seabed mining and environmental modification activities to mitigate the effects of climate change have the potential to harm the highly interconnected and sensitive ecosystems of the open ocean and the deep seabed if not sustainably managed now and into the future. Modern conservation norms such as environmental impact assessment, marine protected areas, marine spatial planning and development mechanisms such as technology transfer and capacity building are under developed in the legal and institutional framework for ABNJ. This article examines key normative features of the legal and institutional framework for ABNJ and their applicability to conservation of marine biodiversity, gaps and disconnects in that framework and ongoing global initiatives to develop more effective governance structures. It discusses some of the options being considered in the UN Ad Hoc Informal Open-ended Working Group to study issues related to the conservation and sustainable use of marine biodiversity in areas beyond national jurisdiction (BBNJ Working Group to evolve the legal and institutional framework for conservation and sustainable use of marine biodiversity in ABNJ and their current and future relevance for the law of the sea. It concludes that the discussions in the BBNJ Working Group and related initiatives in the Convention on Biological Diversity (CBD and at regional level have demonstrated that a more integrated legal and institutional structure is needed to address growing threats to marine biodiversity in ABNJ.

An Overview of Marine Biodiversity in United States Waters

Science.gov (United States)

Fautin, Daphne; Dalton, Penelope; Incze, Lewis S.; Leong, Jo-Ann C.; Pautzke, Clarence; Rosenberg, Andrew; Sandifer, Paul; Sedberry, George; Tunnell, John W.; Abbott, Isabella; Brainard, Russell E.; Brodeur, Melissa; Eldredge, Lucius G.; Feldman, Michael; Moretzsohn, Fabio; Vroom, Peter S.; Wainstein, Michelle; Wolff, Nicholas

2010-01-01

Marine biodiversity of the United States (U.S.) is extensively documented, but data assembled by the United States National Committee for the Census of Marine Life demonstrate that even the most complete taxonomic inventories are based on records scattered in space and time. The best-known taxa are those of commercial importance. Body size is directly correlated with knowledge of a species, and knowledge also diminishes with distance from shore and depth. Measures of biodiversity other than species diversity, such as ecosystem and genetic diversity, are poorly documented. Threats to marine biodiversity in the U.S. are the same as those for most of the world: overexploitation of living resources; reduced water quality; coastal development; shipping; invasive species; rising temperature and concentrations of carbon dioxide in the surface ocean, and other changes that may be consequences of global change, including shifting currents; increased number and size of hypoxic or anoxic areas; and increased number and duration of harmful algal blooms. More information must be obtained through field and laboratory research and monitoring that involve innovative sampling techniques (such as genetics and acoustics), but data that already exist must be made accessible. And all data must have a temporal component so trends can be identified. As data are compiled, techniques must be developed to make certain that scales are compatible, to combine and reconcile data collected for various purposes with disparate gear, and to automate taxonomic changes. Information on biotic and abiotic elements of the environment must be interactively linked. Impediments to assembling existing data and collecting new data on marine biodiversity include logistical problems as well as shortages in finances and taxonomic expertise. PMID:20689852

An overview of marine biodiversity in United States waters

Science.gov (United States)

Fautin, Daphne G.; Delton, Penelope; Incze, Lewis S.; Leong, Jo-Ann C.; Pautzke, Clarence; Rosenberg, Andrew A.; Sandifer, Paul; Sedberry, George R.; Tunnell, John W.; Abbott, Isabella; Brainard, Russell E.; Brodeur, Melissa; Eldredge, Lucius G.; Feldman, Michael; Moretzsohn, Fabio; Vroom, Peter S.; Wainstein, Michelle; Wolff, Nicholas

2010-01-01

Marine biodiversity of the United States (U.S.) is extensively documented, but data assembled by the United States National Committee for the Census of Marine Life demonstrate that even the most complete taxonomic inventories are based on records scattered in space and time. The best-known taxa are those of commercial importance. Body size is directly correlated with knowledge of a species, and knowledge also diminishes with distance from shore and depth. Measures of biodiversity other than species diversity, such as ecosystem and genetic diversity, are poorly documented. Threats to marine biodiversity in the U.S. are the same as those for most of the world: overexploitation of living resources; reduced water quality; coastal development; shipping; invasive species; rising temperature and concentrations of carbon dioxide in the surface ocean, and other changes that may be consequences of global change, including shifting currents; increased number and size of hypoxic or anoxic areas; and increased number and duration of harmful algal blooms. More information must be obtained through field and laboratory research and monitoring that involve innovative sampling techniques (such as genetics and acoustics), but data that already exist must be made accessible. And all data must have a temporal component so trends can be identified. As data are compiled, techniques must be developed to make certain that scales are compatible, to combine and reconcile data collected for various purposes with disparate gear, and to automate taxonomic changes. Information on biotic and abiotic elements of the environment must be interactively linked. Impediments to assembling existing data and collecting new data on marine biodiversity include logistical problems as well as shortages in finances and taxonomic expertise.

Economic growth and marine biodiversity: influence of human social structure on decline of marine trophic levels.

Science.gov (United States)

Clausen, Rebecca; York, Richard

2008-04-01

We assessed the effects of economic growth, urbanization, and human population size on marine biodiversity. We used the mean trophic level (MTL) of marine catch as an indicator of marine biodiversity and conducted cross-national time-series analyses (1960-2003) of 102 nations to investigate human social influences on fish catch and trends in MTL. We constructed path models to examine direct and indirect effects relating to marine catch and MTL. Nations' MTLs declined with increased economic growth, increased urbanization, and increased population size, in part because of associated increased catch. These findings contradict the environmental Kuznets curve hypothesis, which claims that economic modernization will reduce human impact on the environment. To make informed decisions on issues of marine resource management, policy makers, nonprofit entities, and professional societies must recognize the need to include social analyses in overall conservation-research strategies. The challenge is to utilize the socioeconomic and ecological research in the service of a comprehensive marine-conservation movement.

Metagenetic tools for the census of marine meiofaunal biodiversity: An overview.

Science.gov (United States)

Carugati, Laura; Corinaldesi, Cinzia; Dell'Anno, Antonio; Danovaro, Roberto

2015-12-01

Marine organisms belonging to meiofauna (size range: 20-500 μm) are amongst the most abundant and highly diversified metazoans on Earth including 22 over 35 known animal Phyla and accounting for more than 2/3 of the abundance of metazoan organisms. In any marine system, meiofauna play a key role in the functioning of the food webs and sustain important ecological processes. Estimates of meiofaunal biodiversity have been so far almost exclusively based on morphological analyses, but the very small size of these organisms and, in some cases, the insufficient morphological distinctive features limit considerably the census of the biodiversity of this component. Molecular approaches recently applied also to small invertebrates (including meiofauna) can offer a new momentum for the census of meiofaunal biodiversity. Here, we provide an overview on the application of metagenetic approaches based on the use of next generation sequencing platforms to study meiofaunal biodiversity, with a special focus on marine nematodes. Our overview shows that, although such approaches can represent a useful tool for the census of meiofaunal biodiversity, there are still different shortcomings and pitfalls that prevent their extensive use without the support of the classical taxonomic identification. Future investigations are needed to address these problems and to provide a good match between the contrasting findings emerging from classical taxonomic and molecular/bioinformatic tools. Copyright © 2015. Published by Elsevier B.V.

Biodiversity and studies of marine symbiotic siphonostomatoids off ...

African Journals Online (AJOL)

Current knowledge of the biodiversity of the symbiotic marine siphonostomatoids from South African waters (136 species) is sparse compared to that globally (1 388 species). The difference is especially apparent when taking into account the diversity of fish (more than 2 000 species) and invertebrates (approximately 12 ...

Evaluating Temporal Consistency in Marine Biodiversity Hotspots.

Science.gov (United States)

Piacenza, Susan E; Thurman, Lindsey L; Barner, Allison K; Benkwitt, Cassandra E; Boersma, Kate S; Cerny-Chipman, Elizabeth B; Ingeman, Kurt E; Kindinger, Tye L; Lindsley, Amy J; Nelson, Jake; Reimer, Jessica N; Rowe, Jennifer C; Shen, Chenchen; Thompson, Kevin A; Heppell, Selina S

2015-01-01

With the ongoing crisis of biodiversity loss and limited resources for conservation, the concept of biodiversity hotspots has been useful in determining conservation priority areas. However, there has been limited research into how temporal variability in biodiversity may influence conservation area prioritization. To address this information gap, we present an approach to evaluate the temporal consistency of biodiversity hotspots in large marine ecosystems. Using a large scale, public monitoring dataset collected over an eight year period off the US Pacific Coast, we developed a methodological approach for avoiding biases associated with hotspot delineation. We aggregated benthic fish species data from research trawls and calculated mean hotspot thresholds for fish species richness and Shannon's diversity indices over the eight year dataset. We used a spatial frequency distribution method to assign hotspot designations to the grid cells annually. We found no areas containing consistently high biodiversity through the entire study period based on the mean thresholds, and no grid cell was designated as a hotspot for greater than 50% of the time-series. To test if our approach was sensitive to sampling effort and the geographic extent of the survey, we followed a similar routine for the northern region of the survey area. Our finding of low consistency in benthic fish biodiversity hotspots over time was upheld, regardless of biodiversity metric used, whether thresholds were calculated per year or across all years, or the spatial extent for which we calculated thresholds and identified hotspots. Our results suggest that static measures of benthic fish biodiversity off the US West Coast are insufficient for identification of hotspots and that long-term data are required to appropriately identify patterns of high temporal variability in biodiversity for these highly mobile taxa. Given that ecological communities are responding to a changing climate and other

Marine Caves of the Mediterranean Sea: A Sponge Biodiversity Reservoir within a Biodiversity Hotspot

Science.gov (United States)

Gerovasileiou, Vasilis; Voultsiadou, Eleni

2012-01-01

Marine caves are widely acknowledged for their unique biodiversity and constitute a typical feature of the Mediterranean coastline. Herein an attempt was made to evaluate the ecological significance of this particular ecosystem in the Mediterranean Sea, which is considered a biodiversity hotspot. This was accomplished by using Porifera, which dominate the rocky sublittoral substrata, as a reference group in a meta-analytical approach, combining primary research data from the Aegean Sea (eastern Mediterranean) with data derived from the literature. In total 311 species from all poriferan classes were recorded, representing 45.7% of the Mediterranean Porifera. Demospongiae and Homoscleromorpha are highly represented in marine caves at the family (88%), generic (70%), and species level (47.5%), the latter being the most favored group along with Dictyoceratida and Lithistida. Several rare and cave-exclusive species were reported from only one or few caves, indicating the fragmentation and peculiarity of this unique ecosystem. Species richness and phylogenetic diversity varied among Mediterranean areas; the former was positively correlated with research effort, being higher in the northern Mediterranean, while the latter was generally higher in caves than in the overall sponge assemblages of each area. Resemblance analysis among areas revealed that cavernicolous sponge assemblages followed a pattern quite similar to that of the overall Mediterranean assemblages. The same pattern was exhibited by the zoogeographic affinities of cave sponges: species with Atlanto-Mediterranean distribution and Mediterranean endemics prevailed (more than 40% each), 70% of them having warm-water affinities, since most caves were studied in shallow waters. According to our findings, Mediterranean marine caves appear to be important sponge biodiversity reservoirs of high representativeness and great scientific interest, deserving further detailed study and protection. PMID:22808070

Biodiversity's big wet secret: the global distribution of marine biological records reveals chronic under-exploration of the deep pelagic ocean.

Directory of Open Access Journals (Sweden)

Thomas J Webb

Full Text Available BACKGROUND: Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean--the largest biome on Earth--is chronically under-represented in global databases of marine biodiversity. METHODOLOGY/PRINCIPAL FINDINGS: We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. CONCLUSIONS/SIGNIFICANCE: The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem.

Biodiversity hotspots on the Dutch Continental Shelf: a marine strategy framework directive perspective

NARCIS (Netherlands)

Bos, O.G.; Witbaard, R.; Lavaleye, M.S.S.; Moorsel, G.W.N.M.; Teal, L.R.; Hal, van R.; Hammen, van der T.; Hofstede, ter R.; Bemmelen, van R.S.A.; Witte, R.H.; Geelhoed, S.C.V.; Dijkman, E.M.

2011-01-01

This report presenst hotspots of biodiversity for benthos, fish, birds, marine mammals and habitats on the Dutch Continental Shelf. These hotspots are based on a spatial application of biodiversity metrics developed in this study for the GES(Good Environmental Status)-descriptor 1 ‘Biological

Coastal and marine biodiversity of India

Digital Repository Service at National Institute of Oceanography (India)

Venkataraman, K.; Wafar, M.V.M.

endangered eco-regions of the world 1 . Among the Asian countries, India is perhaps the only one that has a long INDIAN J. MAR. SCI., VOL. 34, No. 1, MARCH 2005 58 record of inventories of coastal and marine biodiversity dating back to at least two..., planktonic algae appear to have been more completely catalogued 2,3 . Their compilation suggests that the number of pennate diatoms in the world oceans could range from 500 to 784 and that of centric diatoms, from 865 to 999. Compared with these, not more...

Integrated assessment of marine biodiversity status using a prototype indicator-based assessment tool

DEFF Research Database (Denmark)

Andersen, Jesper H; Dahl, Karsten; Göke, Cordula

2014-01-01

the biodiversity status of Danish marine waters. The biodiversity status was in no areas classified as “unaffected by human activities.” In all the 22 assessment areas, the status was classified as either “moderately affected by human activities” or “significantly affected by human activities.” Spatial variations...

bioSearch : A glimpse into marine biodiversity of Indian coastal waters

Digital Repository Service at National Institute of Oceanography (India)

Kakodkar, A.P.; Alornekar, A.; DSouza, R.; Thomas, T.R.A.; Divekar, R.; Nath, I.V.A.; Kavlekar, D.P.; Ingole, B.S.; Bharathi, P.A.L.

bioSearch is a database application developed to digitize marine biodiversity of Indian coastal waters. A user can obtain information on organism’s binomial and common names, synonyms, taxonomy, morphology, ecology, economic importance, geographical...

Assessing Global Marine Biodiversity Status within a Coupled Socio-Ecological Perspective

Science.gov (United States)

Selig, Elizabeth R.; Longo, Catherine; Halpern, Benjamin S.; Best, Benjamin D.; Hardy, Darren; Elfes, Cristiane T.; Scarborough, Courtney; Kleisner, Kristin M.; Katona, Steven K.

2013-01-01

People value the existence of a variety of marine species and habitats, many of which are negatively impacted by human activities. The Convention on Biological Diversity and other international and national policy agreements have set broad goals for reducing the rate of biodiversity loss. However, efforts to conserve biodiversity cannot be effective without comprehensive metrics both to assess progress towards meeting conservation goals and to account for measures that reduce pressures so that positive actions are encouraged. We developed an index based on a global assessment of the condition of marine biodiversity using publically available data to estimate the condition of species and habitats within 151 coastal countries. Our assessment also included data on social and ecological pressures on biodiversity as well as variables that indicate whether good governance is in place to reduce them. Thus, our index is a social as well as ecological measure of the current and likely future status of biodiversity. As part of our analyses, we set explicit reference points or targets that provide benchmarks for success and allow for comparative assessment of current conditions. Overall country-level scores ranged from 43 to 95 on a scale of 1 to 100, but countries that scored high for species did not necessarily score high for habitats. Although most current status scores were relatively high, likely future status scores for biodiversity were much lower in most countries due to negative trends for both species and habitats. We also found a strong positive relationship between the Human Development Index and resilience measures that could promote greater sustainability by reducing pressures. This relationship suggests that many developing countries lack effective governance, further jeopardizing their ability to maintain species and habitats in the future. PMID:23593188

Marine Biodiversity in Temperate Western Australia: Multi-Taxon Surveys of Minden and Roe Reefs

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Zoe Richards

2016-03-01

Full Text Available A growing body of evidence indicates that temperate marine ecosystems are being tropicalised due to the poleward extension of tropical species. Such climate mediated changes in species distribution patterns have the potential to profoundly alter temperate communities, as this advance can serve to push temperate taxa, many of which are southern Australian endemics, southward. These changes can lead to cascading effects for the biodiversity and function of coastal ecosystems, including contraction of ranges/habitats of sensitive cool water species. Hence there is growing concern for the future of Australia’s temperate marine biodiversity. Here we examine the diversity and abundance of marine flora and fauna at two reefs near Perth’s metropolitan area—Minden Reef and Roe Reef. We report the presence of 427 species of marine flora and fauna from eight taxon groups occurring in the Perth metropolitan area; at least three species of which appear to be new to science. Our data also extends the known range of 15 species, and in numerous instances, thousands of kilometres south from the Kimberley or Pilbara and verifies that tropicalisation of reef communities in the Perth metropolitan area is occurring. We report the presence of 24 species endemic to south-west Australia that may be at risk of range contractions with continued ocean warming. The results of these surveys add to our knowledge of local nearshore marine environments in the Perth metropolitan area and support the growing body of evidence that indicates a diverse and regionally significant marine fauna occurs in temperate Western Australia. Regular, repeated survey work across seasons is important in order to thoroughly document the status of marine biodiversity in this significant transition zone.

Recent Trends in Local-Scale Marine Biodiversity Reflect Community Structure and Human Impacts.

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Elahi, Robin; O'Connor, Mary I; Byrnes, Jarrett E K; Dunic, Jillian; Eriksson, Britas Klemens; Hensel, Marc J S; Kearns, Patrick J

2015-07-20

The modern biodiversity crisis reflects global extinctions and local introductions. Human activities have dramatically altered rates and scales of processes that regulate biodiversity at local scales. Reconciling the threat of global biodiversity loss with recent evidence of stability at fine spatial scales is a major challenge and requires a nuanced approach to biodiversity change that integrates ecological understanding. With a new dataset of 471 diversity time series spanning from 1962 to 2015 from marine coastal ecosystems, we tested (1) whether biodiversity changed at local scales in recent decades, and (2) whether we can ignore ecological context (e.g., proximate human impacts, trophic level, spatial scale) and still make informative inferences regarding local change. We detected a predominant signal of increasing species richness in coastal systems since 1962 in our dataset, though net species loss was associated with localized effects of anthropogenic impacts. Our geographically extensive dataset is unlikely to be a random sample of marine coastal habitats; impacted sites (3% of our time series) were underrepresented relative to their global presence. These local-scale patterns do not contradict the prospect of accelerating global extinctions but are consistent with local species loss in areas with direct human impacts and increases in diversity due to invasions and range expansions in lower impact areas. Attempts to detect and understand local biodiversity trends are incomplete without information on local human activities and ecological context. Copyright © 2015 Elsevier Ltd. All rights reserved.

Development of marine renewable energies and biodiversity conservation - Renewable energies Volume 2

International Nuclear Information System (INIS)

Peguin, Marion; Le Visage, Christophe; Rolland, Guillemette; Moncorps, Sebastien

2014-09-01

After a presentation of the different challenges related to the development of marine renewable energies (energy challenges, conservation of the marine environment, regulatory context), this document proposes a presentation of the different marine renewable energy sectors (status of research, techniques, required conditions, and potential opportunities in France). It presents an assessment of impacts of these different sectors and some recommendations related to various opportunities and threats (noise and vibration, habitat modification, risks of collisions, residual impacts). After a synthesis, thematic sheets are proposed on biodiversity protocols, cumulative impacts, marine protected areas, connection issues, and dismantling issues

Global coordination and standardisation in marine biodiversity through the World Register of Marine Species (WoRMS and related databases.

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Mark J Costello

Full Text Available The World Register of Marine Species is an over 90% complete open-access inventory of all marine species names. Here we illustrate the scale of the problems with species names, synonyms, and their classification, and describe how WoRMS publishes online quality assured information on marine species. Within WoRMS, over 100 global, 12 regional and 4 thematic species databases are integrated with a common taxonomy. Over 240 editors from 133 institutions and 31 countries manage the content. To avoid duplication of effort, content is exchanged with 10 external databases. At present WoRMS contains 460,000 taxonomic names (from Kingdom to subspecies, 368,000 species level combinations of which 215,000 are currently accepted marine species names, and 26,000 related but non-marine species. Associated information includes 150,000 literature sources, 20,000 images, and locations of 44,000 specimens. Usage has grown linearly since its launch in 2007, with about 600,000 unique visitors to the website in 2011, and at least 90 organisations from 12 countries using WoRMS for their data management. By providing easy access to expert-validated content, WoRMS improves quality control in the use of species names, with consequent benefits to taxonomy, ecology, conservation and marine biodiversity research and management. The service manages information on species names that would otherwise be overly costly for individuals, and thus minimises errors in the application of nomenclature standards. WoRMS' content is expanding to include host-parasite relationships, additional literature sources, locations of specimens, images, distribution range, ecological, and biological data. Species are being categorised as introduced (alien, invasive, of conservation importance, and on other attributes. These developments have a multiplier effect on its potential as a resource for biodiversity research and management. As a consequence of WoRMS, we are witnessing improved

Global Coordination and Standardisation in Marine Biodiversity through the World Register of Marine Species (WoRMS) and Related Databases

Science.gov (United States)

Bouchet, Philippe; Boxshall, Geoff; Fauchald, Kristian; Gordon, Dennis; Hoeksema, Bert W.; Poore, Gary C. B.; van Soest, Rob W. M.; Stöhr, Sabine; Walter, T. Chad; Vanhoorne, Bart; Decock, Wim

2013-01-01

The World Register of Marine Species is an over 90% complete open-access inventory of all marine species names. Here we illustrate the scale of the problems with species names, synonyms, and their classification, and describe how WoRMS publishes online quality assured information on marine species. Within WoRMS, over 100 global, 12 regional and 4 thematic species databases are integrated with a common taxonomy. Over 240 editors from 133 institutions and 31 countries manage the content. To avoid duplication of effort, content is exchanged with 10 external databases. At present WoRMS contains 460,000 taxonomic names (from Kingdom to subspecies), 368,000 species level combinations of which 215,000 are currently accepted marine species names, and 26,000 related but non-marine species. Associated information includes 150,000 literature sources, 20,000 images, and locations of 44,000 specimens. Usage has grown linearly since its launch in 2007, with about 600,000 unique visitors to the website in 2011, and at least 90 organisations from 12 countries using WoRMS for their data management. By providing easy access to expert-validated content, WoRMS improves quality control in the use of species names, with consequent benefits to taxonomy, ecology, conservation and marine biodiversity research and management. The service manages information on species names that would otherwise be overly costly for individuals, and thus minimises errors in the application of nomenclature standards. WoRMS' content is expanding to include host-parasite relationships, additional literature sources, locations of specimens, images, distribution range, ecological, and biological data. Species are being categorised as introduced (alien, invasive), of conservation importance, and on other attributes. These developments have a multiplier effect on its potential as a resource for biodiversity research and management. As a consequence of WoRMS, we are witnessing improved communication within the

Climate velocity and the future global redistribution of marine biodiversity

Science.gov (United States)

García Molinos, Jorge; Halpern, Benjamin S.; Schoeman, David S.; Brown, Christopher J.; Kiessling, Wolfgang; Moore, Pippa J.; Pandolfi, John M.; Poloczanska, Elvira S.; Richardson, Anthony J.; Burrows, Michael T.

2016-01-01

Anticipating the effect of climate change on biodiversity, in particular on changes in community composition, is crucial for adaptive ecosystem management but remains a critical knowledge gap. Here, we use climate velocity trajectories, together with information on thermal tolerances and habitat preferences, to project changes in global patterns of marine species richness and community composition under IPCC Representative Concentration Pathways (RCPs) 4.5 and 8.5. Our simple, intuitive approach emphasizes climate connectivity, and enables us to model over 12 times as many species as previous studies. We find that range expansions prevail over contractions for both RCPs up to 2100, producing a net local increase in richness globally, and temporal changes in composition, driven by the redistribution rather than the loss of diversity. Conversely, widespread invasions homogenize present-day communities across multiple regions. High extirpation rates are expected regionally (for example, Indo-Pacific), particularly under RCP8.5, leading to strong decreases in richness and the anticipated formation of no-analogue communities where invasions are common. The spatial congruence of these patterns with contemporary human impacts highlights potential areas of future conservation concern. These results strongly suggest that the millennial stability of current global marine diversity patterns, against which conservation plans are assessed, will change rapidly over the course of the century in response to ocean warming.

Biodiversity of free-living marine nematodes in the southern Yellow Sea, China

Science.gov (United States)

Liu, Xiaoshou; Xu, Man; Hua, Er; Zhang, Zhinan

2016-02-01

Biodiversity patterns of free-living marine nematodes were studied using specific, taxonomic and phylogenetic diversity measures in the southern Yellow Sea, China. The results showed that the average of Shannon-Wiener diversity index ( H') in the study area was 3.17. The higher values were distributed in the east part of Shandong coastal waters and north part of Jiangsu coastal waters, while the lower values were distributed in the southern Yellow Sea Cold Water Mass (YSCWM). The average of taxonomic diversity ( Δ) was 62.09 in the study region. The higher values were distributed in the transitional areas between the coastal areas and the southern YSCWM, while the lower values were distributed near the north part of Jiangsu coastal waters and the YSCWM. Results of correlation analysis of species diversity and taxonomic diversity showed that some of the two kinds of diversity index were independent, which suggested that combining the two kinds of diversity indices can reflect the ecological characteristics better. A test for 95% probability funnels of average taxonomic distinctness and variation in taxonomic distinctness suggested that Station 8794 (in the YSCWM) was outside of the 95% probability funnels, which may be due to the environmental stress. Results of correlation analysis between marine nematodes biodiversity and environmental variables showed that the sediment characteristics (Mdø and Silt-clay fraction) and phaeophorbide a (Pha- a) were the most important factors to determine the biodiversity patterns of marine nematodes.

Biodiversity: invasions by marine life on plastic debris.

Science.gov (United States)

Barnes, David K A

2002-04-25

Colonization by alien species poses one of the greatest threats to global biodiversity. Here I investigate the colonization by marine organisms of drift debris deposited on the shores of 30 remote islands from the Arctic to the Antarctic (across all oceans) and find that human litter more than doubles the rafting opportunities for biota, particularly at high latitudes. Although the poles may be protected from invasion by freezing sea surface temperatures, these may be under threat as the fastest-warming areas anywhere are at these latitudes.

The role of sustained observations in tracking impacts of environmental change on marine biodiversity and ecosystems.

Science.gov (United States)

Mieszkowska, N; Sugden, H; Firth, L B; Hawkins, S J

2014-09-28

Marine biodiversity currently faces unprecedented threats from multiple pressures arising from human activities. Global drivers such as climate change and ocean acidification interact with regional eutrophication, exploitation of commercial fish stocks and localized pressures including pollution, coastal development and the extraction of aggregates and fuel, causing alteration and degradation of habitats and communities. Segregating natural from anthropogenically induced change in marine ecosystems requires long-term, sustained observations of marine biota. In this review, we outline the history of biological recording in the coastal and shelf seas of the UK and Ireland and highlight where sustained observations have contributed new understanding of how anthropogenic activities have impacted on marine biodiversity. The contributions of sustained observations, from those collected at observatories, single station platforms and multiple-site programmes to the emergent field of multiple stressor impacts research, are discussed, along with implications for management and sustainable governance of marine resources in an era of unprecedented use of the marine environment. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

World Register of marine Cave Species (WoRCS): a new Thematic Species Database for marine and anchialine cave biodiversity

NARCIS (Netherlands)

Gerovasileiou, Vasilis; Martínez, Alejandro; Álvarez, Fernando; Boxshall, Geoff; Humphreys, William F.; Jaume, Damià; Becking, L.E.; Muricy, Guilherme; Hengstum, van Peter J.; Dekeyzer, Stefanie; Decock, Wim; Vanhoorne, Bart; Vandepitte, Leen; Bailly, Nicolas; Iliffe, Thomas M.

2016-01-01

Scientific exploration of marine cave environments and anchialine ecosystems over recent decades has led to outstanding discoveries of novel taxa, increasing our knowledge of biodiversity. However, biological research on underwater caves has taken place only in a few areas of the world and relevant

World Register of marine Cave Species (WoRCS: a new Thematic Species Database for marine and anchialine cave biodiversity

Directory of Open Access Journals (Sweden)

Vasilis Gerovasileiou

2016-09-01

Full Text Available Scientific exploration of marine cave environments and anchialine ecosystems over recent decades has led to outstanding discoveries of novel taxa, increasing our knowledge of biodiversity. However, biological research on underwater caves has taken place only in a few areas of the world and relevant information remains fragmented in isolated publications and databases. This fragmentation makes assessing the conservation status of marine cave species especially problematic, and this issue should be addressed urgently given the stresses resulting from planned and rampant development in the coastal zone worldwide. The goal of the World Register of marine Cave Species (WoRCS initiative is to create a comprehensive taxonomic and ecological database of known species from marine caves and anchialine systems worldwide and to present this as a Thematic Species Database (TSD of the World Register of marine Species (WoRMS. WoRCS will incorporate ecological data (e.g., type of environment, salinity regimes, and cave zone as well as geographical information on the distribution of species in cave and anchialine environments. Biodiversity data will be progressively assembled from individual database sources at regional, national or local levels, as well as from literature sources (estimate: >20,000 existing records of cave-dwelling species scattered in several databases. Information will be organized in the WoRCS database following a standard glossary based on existing terminology. Cave-related information will be managed by the WoRCS thematic editors with all data dynamically linked to WoRMS and its team of taxonomic editors. In order to mobilize data into global biogeographic databases, a Gazetteer of the Marine and Anchialine Caves of the World will be established. The presence records of species could be eventually georeferenced for submission to the Ocean Biogeographic Information System (OBIS and constitute an important dataset for biogeographical and

The changing form of Antarctic biodiversity.

Science.gov (United States)

Chown, Steven L; Clarke, Andrew; Fraser, Ceridwen I; Cary, S Craig; Moon, Katherine L; McGeoch, Melodie A

2015-06-25

Antarctic biodiversity is much more extensive, ecologically diverse and biogeographically structured than previously thought. Understanding of how this diversity is distributed in marine and terrestrial systems, the mechanisms underlying its spatial variation, and the significance of the microbiota is growing rapidly. Broadly recognizable drivers of diversity variation include energy availability and historical refugia. The impacts of local human activities and global environmental change nonetheless pose challenges to the current and future understanding of Antarctic biodiversity. Life in the Antarctic and the Southern Ocean is surprisingly rich, and as much at risk from environmental change as it is elsewhere.

Advancing Marine Biological Observations and Data Requirements of the Complementary Essential Ocean Variables (EOVs and Essential Biodiversity Variables (EBVs Frameworks

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Frank E. Muller-Karger

2018-06-01

Full Text Available Measurements of the status and trends of key indicators for the ocean and marine life are required to inform policy and management in the context of growing human uses of marine resources, coastal development, and climate change. Two synergistic efforts identify specific priority variables for monitoring: Essential Ocean Variables (EOVs through the Global Ocean Observing System (GOOS, and Essential Biodiversity Variables (EBVs from the Group on Earth Observations Biodiversity Observation Network (GEO BON (see Data Sheet 1 in Supplementary Materials for a glossary of acronyms. Both systems support reporting against internationally agreed conventions and treaties. GOOS, established under the auspices of the Intergovernmental Oceanographic Commission (IOC, plays a leading role in coordinating global monitoring of the ocean and in the definition of EOVs. GEO BON is a global biodiversity observation network that coordinates observations to enhance management of the world's biodiversity and promote both the awareness and accounting of ecosystem services. Convergence and agreement between these two efforts are required to streamline existing and new marine observation programs to advance scientific knowledge effectively and to support the sustainable use and management of ocean spaces and resources. In this context, the Marine Biodiversity Observation Network (MBON, a thematic component of GEO BON, is collaborating with GOOS, the Ocean Biogeographic Information System (OBIS, and the Integrated Marine Biosphere Research (IMBeR project to ensure that EBVs and EOVs are complementary, representing alternative uses of a common set of scientific measurements. This work is informed by the Joint Technical Commission for Oceanography and Marine Meteorology (JCOMM, an intergovernmental body of technical experts that helps international coordination on best practices for observing, data management and services, combined with capacity development expertise

Micro-Mar: a database for dynamic representation of marine microbial biodiversity

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Rodríguez-Valera Francisco

2005-09-01

Full Text Available Abstract Background The cataloging of marine prokaryotic DNA sequences is a fundamental aspect for bioprospecting and also for the development of evolutionary and speciation models. However, large amount of DNA sequences used to quantify prokaryotic biodiversity requires proper tools for storing, managing and analyzing these data for research purposes. Description The Micro-Mar database has been created to collect DNA diversity information from marine prokaryotes for biogeographical and ecological analyses. The database currently includes 11874 sequences corresponding to high resolution taxonomic genes (16S rRNA, ITS and 23S rRNA and many other genes including CDS of marine prokaryotes together with available biogeographical and ecological information. Conclusion The database aims to integrate molecular data and taxonomic affiliation with biogeographical and ecological features that will allow to have a dynamic representation of the marine microbial diversity embedded in a user friendly web interface. It is available online at http://egg.umh.es/micromar/.

Interdependence of specialization and biodiversity in Phanerozoic marine invertebrates.

Science.gov (United States)

Nürnberg, Sabine; Aberhan, Martin

2015-03-17

Studies of the dynamics of biodiversity often suggest that diversity has upper limits, but the complex interplay between ecological and evolutionary processes and the relative role of biotic and abiotic factors that set upper limits to diversity are poorly understood. Here we statistically assess the relationship between global biodiversity and the degree of habitat specialization of benthic marine invertebrates over the Phanerozoic eon. We show that variation in habitat specialization correlates positively with changes in global diversity, that is, times of high diversity coincide with more specialized faunas. We identify the diversity dynamics of specialists but not generalists, and origination rates but not extinction rates, as the main drivers of this ecological interdependence. Abiotic factors fail to show any significant relationship with specialization. Our findings suggest that the overall level of specialization and its fluctuations over evolutionary timescales are controlled by diversity-dependent processes--driven by interactions between organisms competing for finite resources.

Exploring Marine Biodiversity through Inquiry with Primary School Students: A Successful Journey?

Science.gov (United States)

Jesus-Leibovitz, Luísa; Faria, Cláudia; Baioa, Ana Margarida; Borges, Rita

2017-01-01

In this work, we present a marine ecology inquiry-based activity, implemented with 164 primary school students. The main goal was to evaluate the activity's impact on students' understanding about biodiversity and scientific procedures. We also aimed to analyse the potential use of personal meaning maps (PMMs) to assess the impact of the activity…

Identification, definition and quantification of goods and services provided by marine biodiversity: Implications for the ecosystem approach

NARCIS (Netherlands)

Beaumont, N.J.; Austen, M.C.; Atkins, J.P.; Burdon, D.; Degraer, S.; Dentinho, T.P.; Serous, S.; Holm, P.; Horton, T.; Ierland, van E.C.; Marboe, A.H.; Starkey, D.J.; Townsend, M.; Zarzycki, T.

2007-01-01

This paper identifies and defines ecosystem goods and services provided by marine biodiversity. Case studies have been used to provide an insight into the practical issues associated with the assessment of marine ecosystem goods and services at specific locations. The aim of this research was to

Marine biodiversity baseline for Área de Conservación Guanacaste, Costa Rica: published records

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Jorge Cortés

2017-02-01

Full Text Available The diversity of tropical marine organisms has not been studied as intensively as the terrestrial biota worldwide. Additionally, marine biodiversity research in the tropics lags behind other regions. The 43,000 ha Sector Marino of Área de Conservación Guanacaste (ACG, Marine Sector of Guanacaste Conservation Area, on the North Pacific coast of Costa Rica is no exception. For more than four decades, the terrestrial flora and fauna has been studied continuously. The ACG marine biodiversity was studied in the 1930’s by expeditions that passed through the area, but not much until the 1990’s, except for the marine turtles. In the mid 1990’s the Center for Research in Marine Science and Limnology (CIMAR of the Universidad de Costa Rica (UCR initiated the exploration of the marine environments and organisms of ACG. In 2015, ACG, in collaboration with CIMAR, started the BioMar project whose goal is to inventory the species of the marine sector of ACG (BioMar ACG project. As a baseline, here I have compiled the published records of marine ACG species, and found that 594 marine species have been reported, representing 15.5% of the known species of the Pacific coast of Costa Rica. The most diverse groups were the crustaceans, mollusks and cnidarians comprising 71.7% of the ACG species. Some taxa, such as mangroves and fish parasites are well represented in ACG when compared to the rest of the Costa Rican coast but others appear to be greatly underrepresented, for example, red algae, polychaetes, copepods, equinoderms, and marine fishes and birds, which could be due to sampling bias. Thirty species have been originally described with specimens from ACG, and 89 species are not known from other localities on the Pacific coast of Costa Rica except ACG. Most of the sampling has been concentrated in a few localities in Sector Marino, Playa Blanca and Islas Murciélago, and in the nearby waters of Bahía Santa Elena. In an effort to fill this gap, CIMAR

The changing form of Antarctic biodiversity

OpenAIRE

Chown, Steven L.; Clarke, Andrew; Fraser, Ceridwen I.; Cary, S. Craig; Moon, Katherine L.; McGeoch, Melodie A.

2015-01-01

Antarctic biodiversity is much more extensive, ecologically diverse and biogeographically structured than previously thought. Understanding of how this diversity is distributed in marine and terrestrial systems, the mechanisms underlying its spatial variation, and the significance of the microbiota is growing rapidly. Broadly recognizable drivers of diversity variation include energy availability and historical refugia. The impacts of local human activities and global environmental change non...

Marine biodiversity in the Atlantic and Pacific coasts of South America: knowledge and gaps.

Science.gov (United States)

Miloslavich, Patricia; Klein, Eduardo; Díaz, Juan M; Hernández, Cristián E; Bigatti, Gregorio; Campos, Lucia; Artigas, Felipe; Castillo, Julio; Penchaszadeh, Pablo E; Neill, Paula E; Carranza, Alvar; Retana, María V; Díaz de Astarloa, Juan M; Lewis, Mirtha; Yorio, Pablo; Piriz, María L; Rodríguez, Diego; Yoneshigue-Valentin, Yocie; Gamboa, Luiz; Martín, Alberto

2011-01-31

The marine areas of South America (SA) include almost 30,000 km of coastline and encompass three different oceanic domains--the Caribbean, the Pacific, and the Atlantic--ranging in latitude from 12∘N to 55∘S. The 10 countries that border these coasts have different research capabilities and taxonomic traditions that affect taxonomic knowledge. This paper analyzes the status of knowledge of marine biodiversity in five subregions along the Atlantic and Pacific coasts of South America (SA): the Tropical East Pacific, the Humboldt Current,the Patagonian Shelf, the Brazilian Shelves, and the Tropical West Atlantic, and it provides a review of ecosystem threats and regional marine conservation strategies. South American marine biodiversity is least well known in the tropical subregions (with the exception of Costa Rica and Panama). Differences in total biodiversity were observed between the Atlantic and Pacific oceans at the same latitude. In the north of the continent, the Tropical East Pacific is richer in species than the Tropical West Atlantic, however, when standardized by coastal length, there is very little difference among them. In the south, the Humboldt Current system is much richer than the Patagonian Shelf. An analysis of endemism shows that 75% of the species are reported within only one of the SA regions, while about 22% of the species of SA are not reported elsewhere in the world. National and regional initiatives focusing on new exploration, especially to unknown areas and ecosystems, as well as collaboration among countries are fundamental to achieving the goal of completing inventories of species diversity and distribution.These inventories will allow accurate interpretation of the biogeography of its two oceanic coasts and latitudinal trends,and will also provide relevant information for science based policies.

[Hyperbolic growth of marine and continental biodiversity through the phanerozoic and community evolution].

Science.gov (United States)

Markov, A V; Korotaev, A V

2008-01-01

Among diverse models that are used to describe and interpret the changes in global biodiversity through the Phanerozoic, the exponential and logistic models (traditionally used in population biology) are the most popular. As we have recently demonstrated (Markov, Korotayev, 2007), the growth of the Phanerozoic marine biodiversity at genus level correlates better with the hyperbolic model (widely used in demography and macrosociology). Here we show that the hyperbolic model is also applicable to the Phanerozoic continental biota at genus and family levels, and to the marine biota at species, genus, and family levels. There are many common features in the evolutionary dynamics of the marine and continental biotas that imply similarity and common nature of the factors and mechanisms underlying the hyperbolic growth. Both marine and continental biotas are characterized by continuous growth of the mean longevity of taxa, by decreasing extinction and origination rates, by similar pattern of replacement of dominant groups, by stepwise accumulation of evolutionary stable, adaptable and "physiologically buffered" taxa with effective mechanisms of parental care, protection of early developmental stages, etc. At the beginning of the development of continental biota, the observed taxonomic diversity was substantially lower than that predicted by the hyperbolic model. We suggest that this is due, firstly, to the fact that, during the earliest stages of the continental biota evolution, the groups that are not preserved in the fossil record (such as soil bacteria, unicellular algae, lichens, etc.) played a fundamental role, and secondly, to the fact that the continental biota initially formed as a marginal portion of the marine biota, rather than a separate system. The hyperbolic dynamics is most prominent when both marine and continental biotas are considered together. This fact can be interpreted as a proof of the integrated nature of the biosphere. In the macrosociological

Adaptation and evolution in marine environments. Vol. 2. The impacts of global change on biodiversity

Energy Technology Data Exchange (ETDEWEB)

Verde, Cinzia; Di Prisco, Guido (eds.) [CNR, Napoli (Italy). Inst. of Protein Biochemistry

2013-02-01

Offers a regionally focussed approach. Describes research on adaptive evolution. State-of-the-art content. The second volume of ''Adaptation and Evolution in Marine Environments - The Impacts of Global Change on Biodiversity'' from the series ''From Pole to Pole'' integrates the marine biology contribution of the first tome to the IPY 2007-2009, presenting overviews of organisms (from bacteria and ciliates to higher vertebrates) thriving on polar continental shelves, slopes and deep sea. The speed and extent of warming in the Arctic and in regions of Antarctica (the Peninsula, at the present) are greater than elsewhere. Changes impact several parameters, in particular the extent of sea ice; organisms, ecosystems and communities that became finely adapted to increasing cold in the course of millions of years are now becoming vulnerable, and biodiversity is threatened. Investigating evolutionary adaptations helps to foresee the impact of changes in temperate areas, highlighting the invaluable contribution of polar marine research to present and future outcomes of the IPY in the Earth system scenario.

Effectiveness of biological surrogates for predicting patterns of marine biodiversity: a global meta-analysis.

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Camille Mellin

Full Text Available The use of biological surrogates as proxies for biodiversity patterns is gaining popularity, particularly in marine systems where field surveys can be expensive and species richness high. Yet, uncertainty regarding their applicability remains because of inconsistency of definitions, a lack of standard methods for estimating effectiveness, and variable spatial scales considered. We present a Bayesian meta-analysis of the effectiveness of biological surrogates in marine ecosystems. Surrogate effectiveness was defined both as the proportion of surrogacy tests where predictions based on surrogates were better than random (i.e., low probability of making a Type I error; P and as the predictability of targets using surrogates (R(2. A total of 264 published surrogacy tests combined with prior probabilities elicited from eight international experts demonstrated that the habitat, spatial scale, type of surrogate and statistical method used all influenced surrogate effectiveness, at least according to either P or R(2. The type of surrogate used (higher-taxa, cross-taxa or subset taxa was the best predictor of P, with the higher-taxa surrogates outperforming all others. The marine habitat was the best predictor of R(2, with particularly low predictability in tropical reefs. Surrogate effectiveness was greatest for higher-taxa surrogates at a <10-km spatial scale, in low-complexity marine habitats such as soft bottoms, and using multivariate-based methods. Comparisons with terrestrial studies in terms of the methods used to study surrogates revealed that marine applications still ignore some problems with several widely used statistical approaches to surrogacy. Our study provides a benchmark for the reliable use of biological surrogates in marine ecosystems, and highlights directions for future development of biological surrogates in predicting biodiversity.

Some Implications of High Biodiversity for Management of Tropical Marine Ecosystems—An Australian Perspective

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Richard Kenchington

2017-12-01

Full Text Available While high biodiversity has been widely reported from the tropics, we suggest that in reality there is a considerable underestimate of the total biodiversity. We have concentrated on the tropical regions of Australia and the Coral Triangle. The best known groups are the corals, fish, and commercially important invertebrates. In considering whether this is true, we have concentrated on the diversity of benthic communities and water column communities which are poorly known. Yet at the bottom of the food chain these communities are highly dynamic and susceptible to the anthropogenic changes that are occurring with the rapid development in this highly populated region. Tropical biodiversity is under increasing stress from a synergistic combination of changes in climate, oceanographic regimes, increasing coastal development, overfishing, and poor water quality, resulting in bleaching of corals and loss of habitat and of associated fauna. These changes on reefs have received substantial research attention; in comparison, there is limited data on inter-reefal areas and water column communities and limited understanding of the ecological interconnectivity of all these habitats. While in this region there is growing marine protected area coverage, the major focus is on coral reefs with other habitats based on surrogacy with little if any ground-truthing. Within this region, there is limited capacity or inclination to rectify this lack of knowledge of the structure and ecology of the broader non-commercial benthic and pelagic communities. We suggest this lack of knowledge and limited expertise may be widespread throughout the tropics and compromises our ability to understand and predict the changes that are occurring with increasing anthropogenic impacts on these tropical ecosystems.

The impact of shifts in marine biodiversity hotspots on patterns of range evolution: Evidence from the Holocentridae (squirrelfishes and soldierfishes).

Science.gov (United States)

Dornburg, Alex; Moore, Jon; Beaulieu, Jeremy M; Eytan, Ron I; Near, Thomas J

2015-01-01

One of the most striking biodiversity patterns is the uneven distribution of marine species richness, with species diversity in the Indo-Australian Archipelago (IAA) exceeding all other areas. However, the IAA formed fairly recently, and marine biodiversity hotspots have shifted across nearly half the globe since the Paleogene. Understanding how lineages have responded to shifting biodiversity hotspots represents a necessary historic perspective on the formation and maintenance of global marine biodiversity. Such evolutionary inferences are often challenged by a lack of fossil evidence that provide insights into historic patterns of abundance and diversity. The greatest diversity of squirrelfishes and soldierfishes (Holocentridae) is in the IAA, yet these fishes also represent some of the most numerous fossil taxa in deposits of the former West Tethyan biodiversity hotspot. We reconstruct the pattern of holocentrid range evolution using time-calibrated phylogenies that include most living species and several fossil lineages, demonstrating the importance of including fossil species as terminal taxa in ancestral area reconstructions. Holocentrids exhibit increased range fragmentation following the West Tethyan hotspot collapse. However, rather than originating within the emerging IAA hotspot, the IAA has acted as a reservoir for holocentrid diversity that originated in adjacent regions over deep evolutionary time scales. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Biodiversity, molecular ecology and phylogeography of marine sponges: patterns, implications and outlooks.

Science.gov (United States)

Wörheide, Gert; Solé-Cava, Antonio M; Hooper, John N A

2005-04-01

Marine sponges are an ecologically important and highly diverse component of marine benthic communities, found in all the world's oceans, at all depths. Although their commercial potential and evolutionary importance is increasingly recognized, many pivotal aspects of their basic biology remain enigmatic. Knowledge of historical biogeographic affinities and biodiversity patterns is rudimentary, and there are still few data about genetic variation among sponge populations and spatial patterns of this variation. Biodiversity analyses of tropical Australasian sponges revealed spatial trends not universally reflected in the distributions of other marine phyla within the Indo-West Pacific region. At smaller spatial scales sponges frequently form heterogeneous, spatially patchy assemblages, with some empirical evidence suggesting that environmental variables such as light and/or turbidity strongly contribute to local distributions. There are no apparent latitudinal diversity gradients at larger spatial scales but stochastic processes, such as changing current patterns, the presence or absence of major carbonate platforms and historical biogeography, may determine modern day distributions. Studies on Caribbean oceanic reefs have revealed similar patterns, only weakly correlated with environmental factors. However, several questions remain where molecular approaches promise great potential, e.g., concerning connectivity and biogeographic relationships. Studies to date have helped to reveal that sponge populations are genetically highly structured and that historical processes might play an important role in determining such structure. Increasingly sophisticated molecular tools are now being applied, with results contributing significantly to a better understanding of poriferan microevolutionary processes and molecular ecology.

Unite research with what citizens do for fun: "recreational monitoring" of marine biodiversity.

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Goffredo, Stefano; Pensa, Francesco; Neri, Patrizia; Orlandi, Antonio; Gagliardi, Maria Scola; Velardi, Angela; Piccinetti, Corrado; Zaccanti, Francesco

2010-12-01

Institutes often lack funds and manpower to perform large-scale biodiversity monitoring. Citizens can be involved, contributing to the collection of data, thus decreasing costs. Underwater research requires specialist skills and SCUBA certification, and it can be difficult to involve volunteers. The aim of this study was to involve large numbers of recreational divers in marine biodiversity monitoring for increasing the environmental education of the public and collecting data on the status of marine biodiversity. Here we show that thousands of recreational divers can be enrolled in a short time. Using specially formulated questionnaires, nonspecialist volunteers reported the presence of 61 marine taxa encountered during recreational dives, performed as regular sport dives. Validation trials were carried out to assess the accuracy and consistency of volunteer-recorded data, and these were compared to reference data collected by an experienced researcher. In the majority of trials (76%) volunteers performed with an accuracy and consistency of 50-80%, comparable to the performance of conservation volunteer divers on precise transects in other projects. The recruitment of recreational divers involved the main diving and tour operators in Italy, a popular scientific magazine, and mass media. During the four-year study, 3825 divers completed 18757 questionnaires, corresponding to 13539 diving hours. The volunteer-sightings-based index showed that in the monitored area the biodiversity status did not change significantly within the project time scale, but there was a significant negative correlation with latitude, suggesting improved quality in the southernmost areas. This trend could be related to the presence of stressors in the northern areas and has been supported by investigations performed by the Italian Ministry of the Environment. The greatest limitation with using volunteers to collect data was the uneven spatial distribution of samples. The benefits were the

Implications of Sponge Biodiversity Patterns for the Management of a Marine Reserve in Northern Australia.

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Rachel Przeslawski

Full Text Available Marine reserves are becoming progressively more important as anthropogenic impacts continue to increase, but we have little baseline information for most marine environments. In this study, we focus on the Oceanic Shoals Commonwealth Marine Reserve (CMR in northern Australia, particularly the carbonate banks and terraces of the Sahul Shelf and Van Diemen Rise which have been designated a Key Ecological Feature (KEF. We use a species-level inventory compiled from three marine surveys to the CMR to address several questions relevant to marine management: 1 Are carbonate banks and other raised geomorphic features associated with biodiversity hotspots? 2 Can environmental (depth, substrate hardness, slope or biogeographic (east vs west variables help explain local and regional differences in community structure? 3 Do sponge communities differ among individual raised geomorphic features? Approximately 750 sponge specimens were collected in the Oceanic Shoals CMR and assigned to 348 species, of which only 18% included taxonomically described species. Between eastern and western areas of the CMR, there was no difference between sponge species richness or assemblages on raised geomorphic features. Among individual raised geomorphic features, sponge assemblages were significantly different, but species richness was not. Species richness showed no linear relationships with measured environmental factors, but sponge assemblages were weakly associated with several environmental variables including mean depth and mean backscatter (east and west and mean slope (east only. These patterns of sponge diversity are applied to support the future management and monitoring of this region, particularly noting the importance of spatial scale in biodiversity assessments and associated management strategies.

Implications of Sponge Biodiversity Patterns for the Management of a Marine Reserve in Northern Australia

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Przeslawski, Rachel; Alvarez, Belinda; Kool, Johnathan; Bridge, Tom; Caley, M. Julian; Nichol, Scott

2015-01-01

Marine reserves are becoming progressively more important as anthropogenic impacts continue to increase, but we have little baseline information for most marine environments. In this study, we focus on the Oceanic Shoals Commonwealth Marine Reserve (CMR) in northern Australia, particularly the carbonate banks and terraces of the Sahul Shelf and Van Diemen Rise which have been designated a Key Ecological Feature (KEF). We use a species-level inventory compiled from three marine surveys to the CMR to address several questions relevant to marine management: 1) Are carbonate banks and other raised geomorphic features associated with biodiversity hotspots? 2) Can environmental (depth, substrate hardness, slope) or biogeographic (east vs west) variables help explain local and regional differences in community structure? 3) Do sponge communities differ among individual raised geomorphic features? Approximately 750 sponge specimens were collected in the Oceanic Shoals CMR and assigned to 348 species, of which only 18% included taxonomically described species. Between eastern and western areas of the CMR, there was no difference between sponge species richness or assemblages on raised geomorphic features. Among individual raised geomorphic features, sponge assemblages were significantly different, but species richness was not. Species richness showed no linear relationships with measured environmental factors, but sponge assemblages were weakly associated with several environmental variables including mean depth and mean backscatter (east and west) and mean slope (east only). These patterns of sponge diversity are applied to support the future management and monitoring of this region, particularly noting the importance of spatial scale in biodiversity assessments and associated management strategies. PMID:26606745

Census of biodiversity in marine caves of the eastern Mediterranean Sea

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V. GEROVASILEIOU

2015-03-01

Full Text Available Scientific information on the biodiversity of marine caves in the eastern Mediterranean is limited, especially when considering the extensively studied caves of the north-western and central Mediterranean. Aiming to enhance current knowledge regarding cave communities, this study represents a first assessment of the marine cave biota of the eastern Mediterranean, as this has been defined by the European Union’s Marine Strategy Framework Directive (MSFD. Information retrieved from an extensive overview of relevant scientific documents was combined with original data recorded from 23 marine caves of the north-eastern Mediterranean. Our results report a total of 520 taxa recorded in eastern Mediterranean marine caves to date, the majority of which are sponges, polychaetes, rhodophytes, bivalves, fishes, and gastropods. These include several protected, endemic, and alien species. However, not all taxonomic groups have been equally studied among different areas and future studies are expected to raise the number of endemic and alien species. The overall observed trend is that the reported species number is generally related to sampling effort and scientific expertise. The most well-studied marine cave communities of the eastern Mediterranean are those of the Aegean Sea (especially its northern sector, which presented the highest number of species, followed by those of the Levantine. Furthermore, our research in Aegean caves revealed numerous new records for the marine cave fauna of the eastern basin, while several species are reported for the first time in the marine cave habitat. The critical need for further scientific research, monitoring, and conservation of this unique ecosystem was highlighted by (i the presence of certain species endemic to the eastern Mediterranean coupled with a high proportion of alien species, especially in the Levantine, and (ii the marine cave habitat availability in isolated insular areas of the eastern Mediterranean.

Models of Marine Fish Biodiversity: Assessing Predictors from Three Habitat Classification Schemes.

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Yates, Katherine L; Mellin, Camille; Caley, M Julian; Radford, Ben T; Meeuwig, Jessica J

2016-01-01

Prioritising biodiversity conservation requires knowledge of where biodiversity occurs. Such knowledge, however, is often lacking. New technologies for collecting biological and physical data coupled with advances in modelling techniques could help address these gaps and facilitate improved management outcomes. Here we examined the utility of environmental data, obtained using different methods, for developing models of both uni- and multivariate biodiversity metrics. We tested which biodiversity metrics could be predicted best and evaluated the performance of predictor variables generated from three types of habitat data: acoustic multibeam sonar imagery, predicted habitat classification, and direct observer habitat classification. We used boosted regression trees (BRT) to model metrics of fish species richness, abundance and biomass, and multivariate regression trees (MRT) to model biomass and abundance of fish functional groups. We compared model performance using different sets of predictors and estimated the relative influence of individual predictors. Models of total species richness and total abundance performed best; those developed for endemic species performed worst. Abundance models performed substantially better than corresponding biomass models. In general, BRT and MRTs developed using predicted habitat classifications performed less well than those using multibeam data. The most influential individual predictor was the abiotic categorical variable from direct observer habitat classification and models that incorporated predictors from direct observer habitat classification consistently outperformed those that did not. Our results show that while remotely sensed data can offer considerable utility for predictive modelling, the addition of direct observer habitat classification data can substantially improve model performance. Thus it appears that there are aspects of marine habitats that are important for modelling metrics of fish biodiversity that are

Willingness-To-Pay for Improving Marine Biodiversity: A Case Study of Lastovo Archipelago Marine Park (Croatia

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Michael Getzner

2016-12-01

Full Text Available The sustainable financing of marine protected areas is still an important issue on the conservation agenda even in European countries with strong governance and regulatory frameworks. With the example of the Lastovo Archipelago Marine Park in Croatia, this paper discusses options for funding based on visitors’ willingness-to-pay to conserve marine biodiversity. The site is attractive to general tourists coming by ferries and sailors with private boats alike, which is at the same time a challenge and an opportunity for designing an efficient and effective funding scheme. The authors investigate the willingness-to-pay (WTP of these two groups of visitors for the conservation of characteristic habitats and species based on the visualization of three different scenarios. In the statistical analysis, the authors find a significant WTP that could contribute to the long-term management and financing of the site, taking into account the perceptions and attitudes of the different groups of tourists. All in all, this study provides several conclusions for levying entry fees depending on a segmentation of tourists with respect to their preferences, behavior, socio-economic characteristics, and alternative destinations.

Coastal sea radiation environment and biodiversity protection

International Nuclear Information System (INIS)

Tang Senming; Shang Zhaorong

2009-01-01

This paper characterizes the types, trend and the potential of radiation contamination in the sea against the development of nuclear power stations. Combined with the present status of radioactive contamination and marine biodiversity in China seas, it is pointed out that non-human radiation protection should be considered on the bases of marine biodiversity protection. Besides, the reference species for marine radiation protection and some viewpoints on the work of marine radiation protection in China are pro- posed. (authors)

Underwater itineraries at Egadi Islands: Marine biodiversity protection through actions for sustainable tourism

International Nuclear Information System (INIS)

Cocito, Silvia; Delbono, Ivana; Barsanti, Mattia; Di Nallo, Giuseppina; Lombardi, Chiara; Peirano, Andrea

2015-01-01

Sustainable tourism is recognized as a high priority for environmental and biological conservation. Promoting protection of local biological and environmental resources is a useful action for conservation of marine biodiversity in Marine Protected Areas and for stimulating awareness among residents and visitors. The publication of two books dedicated to the description of 28 selected underwater itineraries, for divers and snorkelers, and a web site with underwater videos represent concrete actions by ENEA for the promotion of sustainable tourism at the Marine Protected Area of Egadi Islands (Sicily, Italy). 177 species were recorded at Favignana, and around the same number at Marettimo and Levanzo islands: among those species, some of them are important for conservation and protection (e.g. Astrospartus mediterraneus), some of them are rare (i.e. Anthipatella subpinnata) and with a high aesthetic value (e.g. Paramuricea clavata, Savalia savaglia), while others are invasive (e.g. Caulerpa cylindracea) [it

A Mapping of Marine Biodiversity Research Trends and Collaboration in the East Asia Region from 1996–2015

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Jungjoon Kim

2016-10-01

Full Text Available Many countries define policies to manage oceans and coastal areas in order to utilize marine ecosystems strategically. When we reviewed the strategies and policies of various countries in relation to ocean sustainability, we found that biodiversity preservation is a key issue for policies related to sustainable marine development. We investigated the research trends and collaboration status of China, Japan and South Korea regarding marine biodiversity through the analysis of scientific articles using bibliometric analysis. The results showed that Japan collaborated the most with other countries compared to China and South Korea. All three countries collaborated with the Organization for Economic Cooperation and Development (OECD and Association of Southeast Asian Nations (ASEAN countries frequently. South Korea showed the strongest inter-collaboration amongst China, Japan and South Korea. Microorganism research is a common research topic in China, Japan and South Korea. Each country demonstrated its own prominent research area, such as local region research in China, deep-sea research in Japan and aquaculture research in South Korea.

European Marine Biodiversity Monitoring Networks: strengths, weaknesses, opportunities and threats

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Joana Patrício

2016-09-01

Full Text Available By 2020, European Union Member States should achieve Good Environmental Status (GES for eleven environmental quality descriptors for their marine waters to fulfill the Marine Strategy Framework Directive (MSFD. By the end of 2015, in coordination with the Regional Seas Conventions, each EU Member States was required to develop a marine strategy for their waters, together with other countries within the same marine region or sub-region. Coherent monitoring programs, submitted in 2014, form a key component of this strategy, which then aimed to lead to a Program of Measures (submitted in 2015. The European DEVOTES FP7 project has produced and interrogated a catalogue of EU marine monitoring related to MSFD descriptors 1 (biological diversity, 2 (non-indigenous species, 4 (food webs and 6 (seafloor integrity. Here we detail the monitoring activity at the regional and sub-regional level for these descriptors, as well as for 11 biodiversity components, 22 habitats and the 37 anthropogenic pressures addressed. The metadata collated for existing European monitoring networks were subject to a SWOT (strengths, weaknesses, opportunities and threats analysis. This interrogation has indicated case studies to address the following questions: a what are the types of monitoring currently in place?; b who does what and how?; c is the monitoring fit-for-purpose for addressing the MSFD requirements?, and d what are the impediments to better monitoring (e.g. costs, shared responsibilities between countries, overlaps, co-ordination? We recommend the future means, to overcome the identified impediments and develop more robust monitoring strategies and as such the results are especially relevant to implementing coordinated monitoring networks throughout Europe, for marine policy makers, government agencies and regulatory bodies. It is emphasized that while many of the recommendations given here require better, more extensive and perhaps more costly monitoring, this is

78 FR 19353 - Biodiversity Beyond National Jurisdiction; Notice of Public Meeting

Science.gov (United States)

2013-03-29

... DEPARTMENT OF STATE [Public Notice 8262] Biodiversity Beyond National Jurisdiction; Notice of... information session regarding issues related to marine biodiversity in areas beyond national jurisdiction... international meetings and negotiations on marine biodiversity beyond national jurisdiction, such as the meeting...

The role of a dominant predator in shaping biodiversity over space and time in a marine ecosystem.

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Ellingsen, Kari E; Anderson, Marti J; Shackell, Nancy L; Tveraa, Torkild; Yoccoz, Nigel G; Frank, Kenneth T

2015-09-01

1. Exploitation of living marine resources has resulted in major changes to populations of targeted species and functional groups of large-bodied species in the ocean. However, the effects of overfishing and collapse of large top predators on the broad-scale biodiversity of oceanic ecosystems remain largely unexplored. 2. Populations of the Atlantic cod (Gadus morhua) were overfished and several collapsed in the early 1990s across Atlantic Canada, providing a unique opportunity to study potential ecosystem-level effects of the reduction of a dominant predator on fish biodiversity, and to identify how such effects might interact with other environmental factors, such as changes in climate, over time. 3. We combined causal modelling with model selection and multimodel inference to analyse 41 years of fishery-independent survey data (1970-2010) and quantify ecosystem-level effects of overfishing and climate variation on the biodiversity of fishes across a broad area (172 000 km(2) ) of the Scotian Shelf. 4. We found that alpha and beta diversity increased with decreases in cod occurrence; fish communities were less homogeneous and more variable in systems where cod no longer dominated. These effects were most pronounced in the colder north-eastern parts of the Scotian Shelf. 5. Our results provide strong evidence that intensive harvesting (and collapse) of marine apex predators can have large impacts on biodiversity, with far-reaching consequences for ecological stability across an entire ecosystem. © 2015 The Authors. Journal of Animal Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society.

Biodiversity of the macrozoobenthos in some protected marine areas along Bulgarian Black Sea coast

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E. Petrova

2017-12-01

Full Text Available Abstract. The aim of this paper is to establish the biodiversity status of the macrozoobenthos in some protected marine areas (NATURA 2000 along the Bulgarian Black Sea coast. The observation stations in the period 2010-2012 were within the frames of the following habitats: 1160 – Large shallow inlets and bays; 1110 – Sandbanks, slightly covered by seawater and Sublittoral mussel banks on sediment. In general, the data shows steady state compared to the 1980s, except for the area near Kamchia River, characterized by low biodiversity due to water pollution from the river inflow (with contaminants from agricultural and industrial sources in the upper river stream and less salinity leading to marine mussel species reduction. In the border area, near the Emona zone, the black mussel catches varied between 160-600 kg in 2005, while only single specimens were detected in 2013. In the same field, the yield of Rapana venosa was within the limits of 5-40 kg in 2005 and between 80-160 kg in 2013. The established variability showed a dynamic balance between Mytilus galloprovicialis and Rapana venosa that pose a challenge for future stock of the black mussel and point the need of regular monitoring.

Can we detect oceanic biodiversity hotspots from space?

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De Monte, Silvia; Soccodato, Alice; Alvain, Séverine; d'Ovidio, Francesco

2013-10-01

Understanding the variability of marine biodiversity is a central issue in microbiology. Current observational programs are based on in situ studies, but their implementation at the global scale is particularly challenging, owing to the ocean extent, its temporal variability and the heterogeneity of the data sources on which compilations are built. Here, we explore the possibility of identifying phytoplanktonic biodiversity hotspots from satellite. We define a Shannon entropy index based on patchiness in ocean color bio-optical anomalies. This index provides a high resolution (1 degree) global coverage. It shows a relation to temperature and mid-latitude maxima in accordance with those previously evidenced in microbiological biodiversity model and observational studies. Regional maxima are in remarkable agreement with several known biodiversity hotspots for plankton organisms and even for higher levels of the marine trophic chain, as well as with some in situ planktonic biodiversity estimates (from Atlantic Meridional Transect cruise). These results encourage to explore marine biodiversity with a coordinated effort of the molecular, ecological and remote sensing communities.

Biodiversity inventories and conservation of the marine fishes of Bootless Bay, Papua New Guinea

Science.gov (United States)

2012-01-01

Background The effective management and conservation of biodiversity is predicated on clearly defined conservation targets. Species number is frequently used as a metric for conservation prioritization and monitoring changes in ecosystem health. We conducted a series of synoptic surveys focusing on the fishes of the Bootless Bay region of Papua New Guinea to generate a checklist of fishes of the region. Bootless Bay lies directly south of Port Moresby, the capital of Papua New Guinea, and experiences the highest human population density of any marine area in the country. Our checklist will set a baseline against which future environmental changes can be tracked. Results We generated a checklist of 488 fish species in 72 families found in Bootless Bay during a two-week sampling effort. Using incident-based methods of species estimation, we extrapolate there to be approximately 940 fish species in Bootless Bay, one of the lowest reported numbers in Papua New Guinea. Conclusions Our data suggest that the Bootless Bay ecosystem of Papua New Guinea, while diverse in absolute terms, has lower fish biodiversity compared to other shallow marine areas within the country. These differences in faunal diversity are most likely a combination of unequal sampling effort as well as biophysical factors within Bootless Bay compounded by historical and/or contemporary anthropogenic disturbances. PMID:22849436

Biodiversity inventories and conservation of the marine fishes of Bootless Bay, Papua New Guinea

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Drew Joshua A

2012-08-01

Full Text Available Abstract Background The effective management and conservation of biodiversity is predicated on clearly defined conservation targets. Species number is frequently used as a metric for conservation prioritization and monitoring changes in ecosystem health. We conducted a series of synoptic surveys focusing on the fishes of the Bootless Bay region of Papua New Guinea to generate a checklist of fishes of the region. Bootless Bay lies directly south of Port Moresby, the capital of Papua New Guinea, and experiences the highest human population density of any marine area in the country. Our checklist will set a baseline against which future environmental changes can be tracked. Results We generated a checklist of 488 fish species in 72 families found in Bootless Bay during a two-week sampling effort. Using incident-based methods of species estimation, we extrapolate there to be approximately 940 fish species in Bootless Bay, one of the lowest reported numbers in Papua New Guinea. Conclusions Our data suggest that the Bootless Bay ecosystem of Papua New Guinea, while diverse in absolute terms, has lower fish biodiversity compared to other shallow marine areas within the country. These differences in faunal diversity are most likely a combination of unequal sampling effort as well as biophysical factors within Bootless Bay compounded by historical and/or contemporary anthropogenic disturbances.

Improving spatial prioritisation for remote marine regions: optimising biodiversity conservation and sustainable development trade-offs

Science.gov (United States)

Moore, Cordelia H.; Radford, Ben T.; Possingham, Hugh P.; Heyward, Andrew J.; Stewart, Romola R.; Watts, Matthew E.; Prescott, Jim; Newman, Stephen J.; Harvey, Euan S.; Fisher, Rebecca; Bryce, Clay W.; Lowe, Ryan J.; Berry, Oliver; Espinosa-Gayosso, Alexis; Sporer, Errol; Saunders, Thor

2016-08-01

Creating large conservation zones in remote areas, with less intense stakeholder overlap and limited environmental information, requires periodic review to ensure zonation mitigates primary threats and fill gaps in representation, while achieving conservation targets. Follow-up reviews can utilise improved methods and data, potentially identifying new planning options yielding a desirable balance between stakeholder interests. This research explored a marine zoning system in north-west Australia-a biodiverse area with poorly documented biota. Although remote, it is economically significant (i.e. petroleum extraction and fishing). Stakeholder engagement was used to source the best available biodiversity and socio-economic data and advanced spatial analyses produced 765 high resolution data layers, including 674 species distributions representing 119 families. Gap analysis revealed the current proposed zoning system as inadequate, with 98.2% of species below the Convention on Biological Diversity 10% representation targets. A systematic conservation planning algorithm Maxan provided zoning options to meet representation targets while balancing this with industry interests. Resulting scenarios revealed that conservation targets could be met with minimal impacts on petroleum and fishing industries, with estimated losses of 4.9% and 7.2% respectively. The approach addressed important knowledge gaps and provided a powerful and transparent method to reconcile industry interests with marine conservation.

The biodiversity of the Mediterranean Sea: estimates, patterns, and threats.

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Marta Coll

Full Text Available The Mediterranean Sea is a marine biodiversity hot spot. Here we combined an extensive literature analysis with expert opinions to update publicly available estimates of major taxa in this marine ecosystem and to revise and update several species lists. We also assessed overall spatial and temporal patterns of species diversity and identified major changes and threats. Our results listed approximately 17,000 marine species occurring in the Mediterranean Sea. However, our estimates of marine diversity are still incomplete as yet-undescribed species will be added in the future. Diversity for microbes is substantially underestimated, and the deep-sea areas and portions of the southern and eastern region are still poorly known. In addition, the invasion of alien species is a crucial factor that will continue to change the biodiversity of the Mediterranean, mainly in its eastern basin that can spread rapidly northwards and westwards due to the warming of the Mediterranean Sea. Spatial patterns showed a general decrease in biodiversity from northwestern to southeastern regions following a gradient of production, with some exceptions and caution due to gaps in our knowledge of the biota along the southern and eastern rims. Biodiversity was also generally higher in coastal areas and continental shelves, and decreases with depth. Temporal trends indicated that overexploitation and habitat loss have been the main human drivers of historical changes in biodiversity. At present, habitat loss and degradation, followed by fishing impacts, pollution, climate change, eutrophication, and the establishment of alien species are the most important threats and affect the greatest number of taxonomic groups. All these impacts are expected to grow in importance in the future, especially climate change and habitat degradation. The spatial identification of hot spots highlighted the ecological importance of most of the western Mediterranean shelves (and in particular

The biodiversity of the Mediterranean Sea: estimates, patterns, and threats.

Science.gov (United States)

Coll, Marta; Piroddi, Chiara; Steenbeek, Jeroen; Kaschner, Kristin; Ben Rais Lasram, Frida; Aguzzi, Jacopo; Ballesteros, Enric; Bianchi, Carlo Nike; Corbera, Jordi; Dailianis, Thanos; Danovaro, Roberto; Estrada, Marta; Froglia, Carlo; Galil, Bella S; Gasol, Josep M; Gertwagen, Ruthy; Gil, João; Guilhaumon, François; Kesner-Reyes, Kathleen; Kitsos, Miltiadis-Spyridon; Koukouras, Athanasios; Lampadariou, Nikolaos; Laxamana, Elijah; López-Fé de la Cuadra, Carlos M; Lotze, Heike K; Martin, Daniel; Mouillot, David; Oro, Daniel; Raicevich, Sasa; Rius-Barile, Josephine; Saiz-Salinas, Jose Ignacio; San Vicente, Carles; Somot, Samuel; Templado, José; Turon, Xavier; Vafidis, Dimitris; Villanueva, Roger; Voultsiadou, Eleni

2010-08-02

The Mediterranean Sea is a marine biodiversity hot spot. Here we combined an extensive literature analysis with expert opinions to update publicly available estimates of major taxa in this marine ecosystem and to revise and update several species lists. We also assessed overall spatial and temporal patterns of species diversity and identified major changes and threats. Our results listed approximately 17,000 marine species occurring in the Mediterranean Sea. However, our estimates of marine diversity are still incomplete as yet-undescribed species will be added in the future. Diversity for microbes is substantially underestimated, and the deep-sea areas and portions of the southern and eastern region are still poorly known. In addition, the invasion of alien species is a crucial factor that will continue to change the biodiversity of the Mediterranean, mainly in its eastern basin that can spread rapidly northwards and westwards due to the warming of the Mediterranean Sea. Spatial patterns showed a general decrease in biodiversity from northwestern to southeastern regions following a gradient of production, with some exceptions and caution due to gaps in our knowledge of the biota along the southern and eastern rims. Biodiversity was also generally higher in coastal areas and continental shelves, and decreases with depth. Temporal trends indicated that overexploitation and habitat loss have been the main human drivers of historical changes in biodiversity. At present, habitat loss and degradation, followed by fishing impacts, pollution, climate change, eutrophication, and the establishment of alien species are the most important threats and affect the greatest number of taxonomic groups. All these impacts are expected to grow in importance in the future, especially climate change and habitat degradation. The spatial identification of hot spots highlighted the ecological importance of most of the western Mediterranean shelves (and in particular, the Strait of

Beyond biodiversity: fish metagenomes.

Science.gov (United States)

Ardura, Alba; Planes, Serge; Garcia-Vazquez, Eva

2011-01-01

Biodiversity and intra-specific genetic diversity are interrelated and determine the potential of a community to survive and evolve. Both are considered together in Prokaryote communities treated as metagenomes or ensembles of functional variants beyond species limits.Many factors alter biodiversity in higher Eukaryote communities, and human exploitation can be one of the most important for some groups of plants and animals. For example, fisheries can modify both biodiversity and genetic diversity (intra specific). Intra-specific diversity can be drastically altered by overfishing. Intense fishing pressure on one stock may imply extinction of some genetic variants and subsequent loss of intra-specific diversity. The objective of this study was to apply a metagenome approach to fish communities and explore its value for rapid evaluation of biodiversity and genetic diversity at community level. Here we have applied the metagenome approach employing the barcoding target gene coi as a model sequence in catch from four very different fish assemblages exploited by fisheries: freshwater communities from the Amazon River and northern Spanish rivers, and marine communities from the Cantabric and Mediterranean seas.Treating all sequences obtained from each regional catch as a biological unit (exploited community) we found that metagenomic diversity indices of the Amazonian catch sample here examined were lower than expected. Reduced diversity could be explained, at least partially, by overexploitation of the fish community that had been independently estimated by other methods.We propose using a metagenome approach for estimating diversity in Eukaryote communities and early evaluating genetic variation losses at multi-species level.

Beyond biodiversity: fish metagenomes.

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Alba Ardura

Full Text Available Biodiversity and intra-specific genetic diversity are interrelated and determine the potential of a community to survive and evolve. Both are considered together in Prokaryote communities treated as metagenomes or ensembles of functional variants beyond species limits.Many factors alter biodiversity in higher Eukaryote communities, and human exploitation can be one of the most important for some groups of plants and animals. For example, fisheries can modify both biodiversity and genetic diversity (intra specific. Intra-specific diversity can be drastically altered by overfishing. Intense fishing pressure on one stock may imply extinction of some genetic variants and subsequent loss of intra-specific diversity. The objective of this study was to apply a metagenome approach to fish communities and explore its value for rapid evaluation of biodiversity and genetic diversity at community level. Here we have applied the metagenome approach employing the barcoding target gene coi as a model sequence in catch from four very different fish assemblages exploited by fisheries: freshwater communities from the Amazon River and northern Spanish rivers, and marine communities from the Cantabric and Mediterranean seas.Treating all sequences obtained from each regional catch as a biological unit (exploited community we found that metagenomic diversity indices of the Amazonian catch sample here examined were lower than expected. Reduced diversity could be explained, at least partially, by overexploitation of the fish community that had been independently estimated by other methods.We propose using a metagenome approach for estimating diversity in Eukaryote communities and early evaluating genetic variation losses at multi-species level.

Marine Biodiversity in Juan Fernández and Desventuradas Islands, Chile: Global Endemism Hotspots.

Science.gov (United States)

Friedlander, Alan M; Ballesteros, Enric; Caselle, Jennifer E; Gaymer, Carlos F; Palma, Alvaro T; Petit, Ignacio; Varas, Eduardo; Muñoz Wilson, Alex; Sala, Enric

2016-01-01

The Juan Fernández and Desventuradas islands are among the few oceanic islands belonging to Chile. They possess a unique mix of tropical, subtropical, and temperate marine species, and although close to continental South America, elements of the biota have greater affinities with the central and south Pacific owing to the Humboldt Current, which creates a strong biogeographic barrier between these islands and the continent. The Juan Fernández Archipelago has ~700 people, with the major industry being the fishery for the endemic lobster, Jasus frontalis. The Desventuradas Islands are uninhabited except for a small Chilean military garrison on San Félix Island. We compared the marine biodiversity of these islands across multiple taxonomic groups. At San Ambrosio Island (SA), in Desventuradas, the laminarian kelp (Eisenia cokeri), which is limited to Desventuradas in Chile, accounted for >50% of the benthic cover at wave exposed areas, while more sheltered sites were dominated by sea urchin barrens. The benthos at Robinson Crusoe Island (RC), in the Juan Fernández Archipelago, comprised a diverse mix of macroalgae and invertebrates, a number of which are endemic to the region. The biomass of commercially targeted fishes was >2 times higher in remote sites around RC compared to sheltered locations closest to port, and overall biomass was 35% higher around SA compared to RC, likely reflecting fishing effects around RC. The number of endemic fish species was extremely high at both islands, with 87.5% of the species surveyed at RC and 72% at SA consisting of regional endemics. Remarkably, endemics accounted for 99% of the numerical abundance of fishes surveyed at RC and 96% at SA, which is the highest assemblage-level endemism known for any individual marine ecosystem on earth. Our results highlight the uniqueness and global significance of these biodiversity hotspots exposed to very different fishing pressures.

Marine Biodiversity in Juan Fernández and Desventuradas Islands, Chile: Global Endemism Hotspots

Science.gov (United States)

Friedlander, Alan M.; Ballesteros, Enric; Caselle, Jennifer E.; Gaymer, Carlos F.; Palma, Alvaro T.; Petit, Ignacio; Varas, Eduardo; Muñoz Wilson, Alex; Sala, Enric

2016-01-01

The Juan Fernández and Desventuradas islands are among the few oceanic islands belonging to Chile. They possess a unique mix of tropical, subtropical, and temperate marine species, and although close to continental South America, elements of the biota have greater affinities with the central and south Pacific owing to the Humboldt Current, which creates a strong biogeographic barrier between these islands and the continent. The Juan Fernández Archipelago has ~700 people, with the major industry being the fishery for the endemic lobster, Jasus frontalis. The Desventuradas Islands are uninhabited except for a small Chilean military garrison on San Félix Island. We compared the marine biodiversity of these islands across multiple taxonomic groups. At San Ambrosio Island (SA), in Desventuradas, the laminarian kelp (Eisenia cokeri), which is limited to Desventuradas in Chile, accounted for >50% of the benthic cover at wave exposed areas, while more sheltered sites were dominated by sea urchin barrens. The benthos at Robinson Crusoe Island (RC), in the Juan Fernández Archipelago, comprised a diverse mix of macroalgae and invertebrates, a number of which are endemic to the region. The biomass of commercially targeted fishes was >2 times higher in remote sites around RC compared to sheltered locations closest to port, and overall biomass was 35% higher around SA compared to RC, likely reflecting fishing effects around RC. The number of endemic fish species was extremely high at both islands, with 87.5% of the species surveyed at RC and 72% at SA consisting of regional endemics. Remarkably, endemics accounted for 99% of the numerical abundance of fishes surveyed at RC and 96% at SA, which is the highest assemblage-level endemism known for any individual marine ecosystem on earth. Our results highlight the uniqueness and global significance of these biodiversity hotspots exposed to very different fishing pressures. PMID:26734732

Highly diverse, poorly studied and uniquely threatened by climate change: an assessment of marine biodiversity on South Georgia's continental shelf.

Directory of Open Access Journals (Sweden)

Oliver T Hogg

Full Text Available We attempt to quantify how significant the polar archipelago of South Georgia is as a source of regional and global marine biodiversity. We evaluate numbers of rare, endemic and range-edge species and how the faunal structure of South Georgia may respond to some of the fastest warming waters on the planet. Biodiversity data was collated from a comprehensive review of reports, papers and databases, collectively representing over 125 years of polar exploration. Classification of each specimen was recorded to species level and fully geo-referenced by depth, latitude and longitude. This information was integrated with physical data layers (e.g. temperature, salinity and flow providing a visualisation of South Georgia's biogeography across spatial, temporal and taxonomic scales, placing it in the wider context of the Southern Hemisphere. This study marks the first attempt to map the biogeography of an archipelago south of the Polar Front. Through it we identify the South Georgian shelf as the most speciose region of the Southern Ocean recorded to date. Marine biodiversity was recorded as rich across taxonomic levels with 17,732 records yielding 1,445 species from 436 families, 51 classes and 22 phyla. Most species recorded were rare, with 35% recorded only once and 86% recorded <10 times. Its marine fauna is marked by the cumulative dominance of endemic and range-edge species, potentially at their thermal tolerance limits. Consequently, our data suggests the ecological implications of environmental change to the South Georgian marine ecosystem could be severe. If sea temperatures continue to rise, we suggest that changes will include depth profile shifts of some fauna towards cooler Antarctic Winter Water (90-150 m, the loss of some range-edge species from regional waters, and the wholesale extinction at a global scale of some of South Georgia's endemic species.

Revealing the appetite of the marine aquarium fish trade: the volume and biodiversity of fish imported into the United States

Science.gov (United States)

Rhyne, Andrew L.; Tlusty, Michael F.; Schofield, Pamela J.; Kaufman, Les; Morris, James A.; Bruckner, Andrew W.

2012-01-01

The aquarium trade and other wildlife consumers are at a crossroads forced by threats from global climate change and other anthropogenic stressors that have weakened coastal ecosystems. While the wildlife trade may put additional stress on coral reefs, it brings income into impoverished parts of the world and may stimulate interest in marine conservation. To better understand the influence of the trade, we must first be able to quantify coral reef fauna moving through it. Herein, we discuss the lack of a data system for monitoring the wildlife aquarium trade and analyze problems that arise when trying to monitor the trade using a system not specifically designed for this purpose. To do this, we examined an entire year of import records of marine tropical fish entering the United States in detail, and discuss the relationship between trade volume, biodiversity and introduction of non-native marine fishes. Our analyses showed that biodiversity levels are higher than previous estimates. Additionally, more than half of government importation forms have numerical or other reporting discrepancies resulting in the overestimation of trade volumes by 27%. While some commonly imported species have been introduced into the coastal waters of the USA (as expected), we also found that some uncommon species in the trade have also been introduced. This is the first study of aquarium trade imports to compare commercial invoices to government forms and provides a means to, routinely and in real time, examine the biodiversity of the trade in coral reef wildlife species.

Possible Origin of Stagnation and Variability of Earth's Biodiversity

Science.gov (United States)

Stollmeier, Frank; Geisel, Theo; Nagler, Jan

2014-06-01

The magnitude and variability of Earth's biodiversity have puzzled scientists ever since paleontologic fossil databases became available. We identify and study a model of interdependent species where both endogenous and exogenous impacts determine the nonstationary extinction dynamics. The framework provides an explanation for the qualitative difference of marine and continental biodiversity growth. In particular, the stagnation of marine biodiversity may result from a global transition from an imbalanced to a balanced state of the species dependency network. The predictions of our framework are in agreement with paleontologic databases.

Negotiating the use of biodiversity in marine areas beyond national jurisdiction

Directory of Open Access Journals (Sweden)

Robert Blasiak

2016-11-01

Full Text Available A relatively small group of states is disproportionately active in marine areas beyond national jurisdiction (ABNJ, raising questions of equity, while a myriad of sectoral regulations and guidelines spread across multiple international bodies has led to uneven conservation and use of biological diversity and resources in these areas. Within this context, the UN General Assembly resolved in 2015 to begin negotiations on an international legally-binding instrument to conserve and protect biodiversity in ABNJ, with the negotiations framed by four issues: (1 marine genetic resources, including questions on the sharing of benefits; (2 measures such as area-based management tools, including marine protected areas; (3 environmental impact assessments; (4 capacity building and the transfer of marine technology. Yet our analysis demonstrates that least developed countries (LDCs and small island developing states (SIDS are significantly under-represented in regional and international meetings on such issues, while the authorship of academic literature on these topics is dominated to an unusual extent by Organization for Economic Cooperation and Development (OECD member states (97%. Statistical analysis of delegation statements delivered during the first round of negotiations following the UN General Assembly resolution also illustrates that the interests of OECD member states differ substantially from LDCs and SIDS, suggesting that imbalanced representation has the potential to result in skewed negotiations. Moreover, the restriction on negotiating parties not to undermine the mandate of existing organizations limits their maneuverability, and may hamper progress towards achieving ambitious time-bound commitments to promote sustainable resource use and reduce inequality (e.g. under the Sustainable Development Goals and Aichi Targets. With ABNJ covering half the world’s surface, self-interested compliance with new regulations is the most promising

Monitoring Biodiversity using Environmental DNA

DEFF Research Database (Denmark)

Thomsen, Philip Francis

DNA). Especially the advance in DNA sequencing technology has revolutionized this field and opened new frontiers in ecology, evolution and environmental sciences. Also, it is becoming a powerful tool for field biologist, with new and efficient methods for monitoring biodiversity. This thesis focuses on the use...... of eDNA in monitoring of biodiversity in different settings. First, it is shown that a diversity of rare freshwater animals – representing amphibians, fish, mammals, insects and crustaceans – can be detected based on eDNA obtained directly from 15 ml water samples of lakes, ponds and streams...... setting, showing that eDNA obtained directly from ½ l seawater samples can account for marine fish biodiversity using NGS. Promisingly, eDNA covered the fish diversity better than any of 9 methods, conventionally used in marine fish surveys. Additionally, it is shown that even short 100-bp. fish e...

Baltic Sea biodiversity status vs. cumulative human pressures

DEFF Research Database (Denmark)

Andersen, Jesper H.; Halpern, Benjamin S.; Korpinen, Samuli

2015-01-01

Abstract Many studies have tried to explain spatial and temporal variations in biodiversity status of marine areas from a single-issue perspective, such as fishing pressure or coastal pollution, yet most continental seas experience a wide range of human pressures. Cumulative impact assessments have...... been developed to capture the consequences of multiple stressors for biodiversity, but the ability of these assessments to accurately predict biodiversity status has never been tested or ground-truthed. This relationship has similarly been assumed for the Baltic Sea, especially in areas with impaired...... status, but has also never been documented. Here we provide a first tentative indication that cumulative human impacts relate to ecosystem condition, i.e. biodiversity status, in the Baltic Sea. Thus, cumulative impact assessments offer a promising tool for informed marine spatial planning, designation...

Force majeure: Will climate change affect our ability to attain Good Environmental Status for marine biodiversity?

Science.gov (United States)

Elliott, Michael; Borja, Ángel; McQuatters-Gollop, Abigail; Mazik, Krysia; Birchenough, Silvana; Andersen, Jesper H; Painting, Suzanne; Peck, Myron

2015-06-15

The EU Marine Strategy Framework Directive (MSFD) requires that Good Environmental Status (GEnS), is achieved for European seas by 2020. These may deviate from GEnS, its 11 Descriptors, targets and baselines, due to endogenic managed pressures (from activities within an area) and externally due to exogenic unmanaged pressures (e.g. climate change). Conceptual models detail the likely or perceived changes expected on marine biodiversity and GEnS Descriptors in the light of climate change. We emphasise that marine management has to accommodate 'shifting baselines' caused by climate change particularly during GEnS monitoring, assessment and management and 'unbounded boundaries' given the migration and dispersal of highly-mobile species. We suggest climate change may prevent GEnS being met, but Member States may rebut legal challenges by claiming that this is outside its control, force majeure or due to 'natural causes' (Article 14 of the MSFD). The analysis is relevant to management of other global seas. Copyright © 2015 Elsevier Ltd. All rights reserved.

Freshwater Megafauna: Flagships for Freshwater Biodiversity under Threat.

Science.gov (United States)

Carrizo, Savrina F; Jähnig, Sonja C; Bremerich, Vanessa; Freyhof, Jörg; Harrison, Ian; He, Fengzhi; Langhans, Simone D; Tockner, Klement; Zarfl, Christiane; Darwall, William

2017-10-01

Freshwater biodiversity is highly threatened and is decreasing more rapidly than its terrestrial or marine counterparts; however, freshwaters receive less attention and conservation investment than other ecosystems do. The diverse group of freshwater megafauna, including iconic species such as sturgeons, river dolphins, and turtles, could, if promoted, provide a valuable tool to raise awareness and funding for conservation. We found that freshwater megafauna inhabit every continent except Antarctica, with South America, Central Africa, and South and Southeast Asia being particularly species rich. Freshwater megafauna co-occur with up to 93% of mapped overall freshwater biodiversity. Fifty-eight percent of the 132 megafauna species included in the study are threatened, with 84% of their collective range falling outside of protected areas. Of all threatened freshwater species, 83% are found within the megafauna range, revealing the megafauna's capacity as flagship and umbrella species for fostering freshwater conservation.

Identification, definition and quantification of goods and services provided by marine biodiversity: implications for the ecosystem approach.

Science.gov (United States)

Beaumont, N J; Austen, M C; Atkins, J P; Burdon, D; Degraer, S; Dentinho, T P; Derous, S; Holm, P; Horton, T; van Ierland, E; Marboe, A H; Starkey, D J; Townsend, M; Zarzycki, T

2007-03-01

This paper identifies and defines ecosystem goods and services provided by marine biodiversity. Case studies have been used to provide an insight into the practical issues associated with the assessment of marine ecosystem goods and services at specific locations. The aim of this research was to validate the definitions of goods and services, and to identify knowledge gaps and likely difficulties of quantifying the goods and services. A validated theoretical framework for the assessment of goods and services is detailed, and examples of the goods and services at a variety of case study areas are documented. These results will enable future assessments of marine ecosystem goods and services. It is concluded that the utilisation of this goods and services approach has the capacity to play a fundamental role in the Ecosystem Approach, by enabling the pressures and demands of society, the economy and the environment to be integrated into environmental management.

Biodiversity of arctic marine fishes

DEFF Research Database (Denmark)

Mecklenburg, Catherine W.; Møller, Peter Rask; Steinke, Dirk

2011-01-01

Taxonomic and distributional information on each fish species found in arctic marine waters is reviewed, and a list of families and species with commentary on distributional records is presented. The list incorporates results from examination of museum collections of arctic marine fishes dating b...

Defining Essential Biodiversity Variables (EBVs) as a contribution to Essential Ocean Variables (EOVs): A Core Task of the Marine Biodiversity Observation Network (MBON) to Accelerate Integration of Biological Observations in the Global Ocean Observing System (GOOS)

Science.gov (United States)

Pearlman, J.; Muller-Karger, F. E.; Sousa Pinto, I.; Costello, M. J.; Duffy, J. E.; Appeltans, W.; Fischer, A. S.; Canonico, G.; Klein, E.; Obura, D.; Montes, E.; Miloslavich, P.; Howard, M.

2017-12-01

The Marine Biodiversity Observation Network (MBON) is a networking effort under the umbrella of the Group on Earth Observations Biodiversity Observation Network (GEO BON). The objective of the MBON is to link existing groups engaged in ocean observation and help define practical indices to deploy in an operational manner to track changes in the number of marine species, the abundance and biomass of marine organisms, the diverse interactions between organisms and the environment, and the variability and change of specific habitats of interest. MBON serves as the biodiversity arm of Blue Planet, the initiative of the Group on Earth Observations (GEO) for the benefit of society. The Global Ocean Observing System (GOOS) was established under the auspices of the Intergovernmental Oceanographic Commission (IOC) in 1991 to organize international ocean observing efforts. The mission of the GOOS is to support monitoring to improve the management of marine and coastal ecosystems and resources, and to enable scientific research. GOOS is engaged in a continuing, rigorous process of identifying Essential Ocean Variables (EOVs). MBON is working with GOOS and the Ocean Biogeographic Information System (OBIS, also under the IOC) to define Essential Biodiversity Variables (EBVs) as those Essential Ocean Variables (EOVs) that have explicit taxonomic records associated with them. For practical purposes, EBVs are a subset of the EOVs. The focus is to promote the integration of biological EOVs including EBVs into the existing and planned national and international ocean observing systems. The definition avoids a proliferation of 'essential' variables across multiple organizations. MBON will continue to advance practical and wide use of EBVs and related EOV. This is an effective way to contribute to several UN assessments (e.g., from IPBES, IPCC, and the World Ocean Assessment under the UN Regular Process), UN Sustainable Development Goals, and to address targets and goals defined under

Rapid effects of marine reserves via larval dispersal.

Directory of Open Access Journals (Sweden)

Richard Cudney-Bueno

Full Text Available Marine reserves have been advocated worldwide as conservation and fishery management tools. It is argued that they can protect ecosystems and also benefit fisheries via density-dependent spillover of adults and enhanced larval dispersal into fishing areas. However, while evidence has shown that marine reserves can meet conservation targets, their effects on fisheries are less understood. In particular, the basic question of if and over what temporal and spatial scales reserves can benefit fished populations via larval dispersal remains unanswered. We tested predictions of a larval transport model for a marine reserve network in the Gulf of California, Mexico, via field oceanography and repeated density counts of recently settled juvenile commercial mollusks before and after reserve establishment. We show that local retention of larvae within a reserve network can take place with enhanced, but spatially-explicit, recruitment to local fisheries. Enhancement occurred rapidly (2 yrs, with up to a three-fold increase in density of juveniles found in fished areas at the downstream edge of the reserve network, but other fishing areas within the network were unaffected. These findings were consistent with our model predictions. Our findings underscore the potential benefits of protecting larval sources and show that enhancement in recruitment can be manifested rapidly. However, benefits can be markedly variable within a local seascape. Hence, effects of marine reserve networks, positive or negative, may be overlooked when only focusing on overall responses and not considering finer spatially-explicit responses within a reserve network and its adjacent fishing grounds. Our results therefore call for future research on marine reserves that addresses this variability in order to help frame appropriate scenarios for the spatial management scales of interest.

From sea to sea: Canada's three oceans of biodiversity.

Science.gov (United States)

Archambault, Philippe; Snelgrove, Paul V R; Fisher, Jonathan A D; Gagnon, Jean-Marc; Garbary, David J; Harvey, Michel; Kenchington, Ellen L; Lesage, Véronique; Levesque, Mélanie; Lovejoy, Connie; Mackas, David L; McKindsey, Christopher W; Nelson, John R; Pepin, Pierre; Piché, Laurence; Poulin, Michel

2010-08-31

Evaluating and understanding biodiversity in marine ecosystems are both necessary and challenging for conservation. This paper compiles and summarizes current knowledge of the diversity of marine taxa in Canada's three oceans while recognizing that this compilation is incomplete and will change in the future. That Canada has the longest coastline in the world and incorporates distinctly different biogeographic provinces and ecoregions (e.g., temperate through ice-covered areas) constrains this analysis. The taxonomic groups presented here include microbes, phytoplankton, macroalgae, zooplankton, benthic infauna, fishes, and marine mammals. The minimum number of species or taxa compiled here is 15,988 for the three Canadian oceans. However, this number clearly underestimates in several ways the total number of taxa present. First, there are significant gaps in the published literature. Second, the diversity of many habitats has not been compiled for all taxonomic groups (e.g., intertidal rocky shores, deep sea), and data compilations are based on short-term, directed research programs or longer-term monitoring activities with limited spatial resolution. Third, the biodiversity of large organisms is well known, but this is not true of smaller organisms. Finally, the greatest constraint on this summary is the willingness and capacity of those who collected the data to make it available to those interested in biodiversity meta-analyses. Confirmation of identities and intercomparison of studies are also constrained by the disturbing rate of decline in the number of taxonomists and systematists specializing on marine taxa in Canada. This decline is mostly the result of retirements of current specialists and to a lack of training and employment opportunities for new ones. Considering the difficulties encountered in compiling an overview of biogeographic data and the diversity of species or taxa in Canada's three oceans, this synthesis is intended to serve as a

Arctic Terrestrial Biodiversity Monitoring Plan

DEFF Research Database (Denmark)

Christensen, Tom; Payne, J.; Doyle, M.

The Conservation of Arctic Flora and Fauna (CAFF), the biodiversity working group of the Arctic Council, established the Circumpolar Biodiversity Monitoring Program (CBMP) to address the need for coordinated and standardized monitoring of Arctic environments. The CBMP includes an international...... on developing and implementing long-term plans for monitoring the integrity of Arctic biomes: terrestrial, marine, freshwater, and coastal (under development) environments. The CBMP Terrestrial Expert Monitoring Group (CBMP-TEMG) has developed the Arctic Terrestrial Biodiversity Monitoring Plan (CBMP......-Terrestrial Plan/the Plan) as the framework for coordinated, long-term Arctic terrestrial biodiversity monitoring. The goal of the CBMP-Terrestrial Plan is to improve the collective ability of Arctic traditional knowledge (TK) holders, northern communities, and scientists to detect, understand and report on long...

Towards quantitative condition assessment of biodiversity outcomes: Insights from Australian marine protected areas.

Science.gov (United States)

Addison, Prue F E; Flander, Louisa B; Cook, Carly N

2017-08-01

Protected area management effectiveness (PAME) evaluation is increasingly undertaken to evaluate governance, assess conservation outcomes and inform evidence-based management of protected areas (PAs). Within PAME, quantitative approaches to assess biodiversity outcomes are now emerging, where biological monitoring data are directly assessed against quantitative (numerically defined) condition categories (termed quantitative condition assessments). However, more commonly qualitative condition assessments are employed in PAME, which use descriptive condition categories and are evaluated largely with expert judgement that can be subject to a range of biases, such as linguistic uncertainty and overconfidence. Despite the benefits of increased transparency and repeatability of evaluations, quantitative condition assessments are rarely used in PAME. To understand why, we interviewed practitioners from all Australian marine protected area (MPA) networks, which have access to long-term biological monitoring data and are developing or conducting PAME evaluations. Our research revealed that there is a desire within management agencies to implement quantitative condition assessment of biodiversity outcomes in Australian MPAs. However, practitioners report many challenges in transitioning from undertaking qualitative to quantitative condition assessments of biodiversity outcomes, which are hampering progress. Challenges include a lack of agency capacity (staff numbers and money), knowledge gaps, and diminishing public and political support for PAs. We point to opportunities to target strategies that will assist agencies overcome these challenges, including new decision support tools, approaches to better finance conservation efforts, and to promote more management relevant science. While a single solution is unlikely to achieve full evidence-based conservation, we suggest ways for agencies to target strategies and advance PAME evaluations toward best practice. Copyright �

Rapid biotic homogenization of marine fish assemblages

Science.gov (United States)

Magurran, Anne E.; Dornelas, Maria; Moyes, Faye; Gotelli, Nicholas J.; McGill, Brian

2015-01-01

The role human activities play in reshaping biodiversity is increasingly apparent in terrestrial ecosystems. However, the responses of entire marine assemblages are not well-understood, in part, because few monitoring programs incorporate both spatial and temporal replication. Here, we analyse an exceptionally comprehensive 29-year time series of North Atlantic groundfish assemblages monitored over 5° latitude to the west of Scotland. These fish assemblages show no systematic change in species richness through time, but steady change in species composition, leading to an increase in spatial homogenization: the species identity of colder northern localities increasingly resembles that of warmer southern localities. This biotic homogenization mirrors the spatial pattern of unevenly rising ocean temperatures over the same time period suggesting that climate change is primarily responsible for the spatial homogenization we observe. In this and other ecosystems, apparent constancy in species richness may mask major changes in species composition driven by anthropogenic change. PMID:26400102

DNA Barcoding of Marine Metazoa

Science.gov (United States)

Bucklin, Ann; Steinke, Dirk; Blanco-Bercial, Leocadio

2011-01-01

More than 230,000 known species representing 31 metazoan phyla populate the world's oceans. Perhaps another 1,000,000 or more species remain to be discovered. There is reason for concern that species extinctions may outpace discovery, especially in diverse and endangered marine habitats such as coral reefs. DNA barcodes (i.e., short DNA sequences for species recognition and discrimination) are useful tools to accelerate species-level analysis of marine biodiversity and to facilitate conservation efforts. This review focuses on the usual barcode region for metazoans: a ˜648 base-pair region of the mitochondrial cytochrome c oxidase subunit I (COI) gene. Barcodes have also been used for population genetic and phylogeographic analysis, identification of prey in gut contents, detection of invasive species, forensics, and seafood safety. More controversially, barcodes have been used to delimit species boundaries, reveal cryptic species, and discover new species. Emerging frontiers are the use of barcodes for rapid and increasingly automated biodiversity assessment by high-throughput sequencing, including environmental barcoding and the use of barcodes to detect species for which formal identification or scientific naming may never be possible.

Marine biodiversity of the coastal area of the Berau region, East Kalimantan, Indonesia : progress report East Kalimantan program, pilot phase (October 2003) : preliminary results of a field survey performed by an Indonesian-Dutch biodiversity research team

NARCIS (Netherlands)

Hoeksema, B.W.

2004-01-01

The coastal waters of East Kalimantan are part of the western boundary of the Indo-West Pacific centre of maximum marine biodiversity. During the pilot phase of the East Kalimantan Program (EKP) this has been tested by various specialists who used model taxa to test this hypothesis. Emphasis has

Data integration for European marine biodiversity research: creating a database on benthos and plankton to study large-scale patterns and long-term changes

NARCIS (Netherlands)

Vandepitte, L.; Vanhoorne, B.; Kraberg, A.; Anisimova, N.; Antoniadou, C.; Araújo, R.; Bartsch, I.; Beker, B.; Benedetti-Cecchi, L.; Bertocci, I.; Cochrane, S.J.; Cooper, K.; Craeymeersch, J.A.; Christou, E.; Crisp, D.J.; Dahle, S.; de Boissier, M.; De Kluijver, M.; Denisenko, S.; De Vito, D.; Duineveld, G.; Escaravage, V.L.; Fleischer, D.; Fraschetti, S.; Giangrande, A.; Heip, C.H.R.; Hummel, H.; Janas, U.; Karez, R.; Kedra, M.; Kingston, P.; Kuhlenkamp, R.; Libes, M.; Martens, P.; Mees, J.; Mieszkowska, N.; Mudrak, S.; Munda, I.; Orfanidis, S.; Orlando-Bonaca, M.; Palerud, R.; Rachor, E.; Reichert, K.; Rumohr, H.; Schiedek, D.; Schubert, P.; Sistermans, W.C.H.; Sousa Pinto, I.S.; Southward, A.J.; Terlizzi, A.; Tsiaga, E.; Van Beusekom, J.E.E.; Vanden Berghe, E.; Warzocha, J.; Wasmund, N.; Weslawski, J.M.; Widdicombe, C.; Wlodarska-Kowalczuk, M.; Zettler, M.L.

2010-01-01

The general aim of setting up a central database on benthos and plankton was to integrate long-, medium- and short-term datasets on marine biodiversity. Such a database makes it possible to analyse species assemblages and their changes on spatial and temporal scales across Europe. Data collation

Conservation Status of Marine Biodiversity in Oceania: An Analysis of Marine Species on the IUCN Red List of Threatened Species

Directory of Open Access Journals (Sweden)

Beth A. Polidoro

2011-01-01

Full Text Available Given the economic and cultural dependence on the marine environment in Oceania and a rapidly expanding human population, many marine species populations are in decline and may be vulnerable to extinction from a number of local and regional threats. IUCN Red List assessments, a widely used system for quantifying threats to species and assessing species extinction risk, have been completed for 1190 marine species in Oceania to date, including all known species of corals, mangroves, seagrasses, sea snakes, marine mammals, sea birds, sea turtles, sharks, and rays present in Oceania, plus all species in five important perciform fish groups. Many of the species in these groups are threatened by the modification or destruction of coastal habitats, overfishing from direct or indirect exploitation, pollution, and other ecological or environmental changes associated with climate change. Spatial analyses of threatened species highlight priority areas for both site- and species-specific conservation action. Although increased knowledge and use of newly available IUCN Red List assessments for marine species can greatly improve conservation priorities for marine species in Oceania, many important fish groups are still in urgent need of assessment.

Rapid Assessment of Ecosystem Service Co-Benefits of Biodiversity Priority Areas in Madagascar.

Directory of Open Access Journals (Sweden)

Rachel A Neugarten

Full Text Available The importance of ecosystems for supporting human well-being is increasingly recognized by both the conservation and development sectors. Our ability to conserve ecosystems that people rely on is often limited by a lack of spatially explicit data on the location and distribution of ecosystem services (ES, the benefits provided by nature to people. Thus there is a need to map ES to guide conservation investments, to ensure these co-benefits are maintained. To target conservation investments most effectively, ES assessments must be rigorous enough to support conservation planning, rapid enough to respond to decision-making timelines, and often must rely on existing data. We developed a framework for rapid spatial assessment of ES that relies on expert and stakeholder consultation, available data, and spatial analyses in order to rapidly identify sites providing multiple benefits. We applied the framework in Madagascar, a country with globally significant biodiversity and a high level of human dependence on ecosystems. Our objective was to identify the ES co-benefits of biodiversity priority areas in order to guide the investment strategy of a global conservation fund. We assessed key provisioning (fisheries, hunting and non-timber forest products, and water for domestic use, agriculture, and hydropower, regulating (climate mitigation, flood risk reduction and coastal protection, and cultural (nature tourism ES. We also conducted multi-criteria analyses to identify sites providing multiple benefits. While our approach has limitations, including the reliance on proximity-based indicators for several ES, the results were useful for targeting conservation investments by the Critical Ecosystem Partnership Fund (CEPF. Because our approach relies on available data, standardized methods for linking ES provision to ES use, and expert validation, it has the potential to quickly guide conservation planning and investment decisions in other data-poor regions.

Rapid Assessment of Ecosystem Service Co-Benefits of Biodiversity Priority Areas in Madagascar

Science.gov (United States)

Andriamaro, Luciano; Cano, Carlos Andres; Grantham, Hedley S.; Hole, David; Juhn, Daniel; McKinnon, Madeleine; Rasolohery, Andriambolantsoa; Steininger, Marc; Wright, Timothy Max

2016-01-01

The importance of ecosystems for supporting human well-being is increasingly recognized by both the conservation and development sectors. Our ability to conserve ecosystems that people rely on is often limited by a lack of spatially explicit data on the location and distribution of ecosystem services (ES), the benefits provided by nature to people. Thus there is a need to map ES to guide conservation investments, to ensure these co-benefits are maintained. To target conservation investments most effectively, ES assessments must be rigorous enough to support conservation planning, rapid enough to respond to decision-making timelines, and often must rely on existing data. We developed a framework for rapid spatial assessment of ES that relies on expert and stakeholder consultation, available data, and spatial analyses in order to rapidly identify sites providing multiple benefits. We applied the framework in Madagascar, a country with globally significant biodiversity and a high level of human dependence on ecosystems. Our objective was to identify the ES co-benefits of biodiversity priority areas in order to guide the investment strategy of a global conservation fund. We assessed key provisioning (fisheries, hunting and non-timber forest products, and water for domestic use, agriculture, and hydropower), regulating (climate mitigation, flood risk reduction and coastal protection), and cultural (nature tourism) ES. We also conducted multi-criteria analyses to identify sites providing multiple benefits. While our approach has limitations, including the reliance on proximity-based indicators for several ES, the results were useful for targeting conservation investments by the Critical Ecosystem Partnership Fund (CEPF). Because our approach relies on available data, standardized methods for linking ES provision to ES use, and expert validation, it has the potential to quickly guide conservation planning and investment decisions in other data-poor regions. PMID:28006005

Biodiversity enhances reef fish biomass and resistance to climate change.

Science.gov (United States)

Duffy, J Emmett; Lefcheck, Jonathan S; Stuart-Smith, Rick D; Navarrete, Sergio A; Edgar, Graham J

2016-05-31

Fishes are the most diverse group of vertebrates, play key functional roles in aquatic ecosystems, and provide protein for a billion people, especially in the developing world. Those functions are compromised by mounting pressures on marine biodiversity and ecosystems. Because of its economic and food value, fish biomass production provides an unusually direct link from biodiversity to critical ecosystem services. We used the Reef Life Survey's global database of 4,556 standardized fish surveys to test the importance of biodiversity to fish production relative to 25 environmental drivers. Temperature, biodiversity, and human influence together explained 47% of the global variation in reef fish biomass among sites. Fish species richness and functional diversity were among the strongest predictors of fish biomass, particularly for the large-bodied species and carnivores preferred by fishers, and these biodiversity effects were robust to potentially confounding influences of sample abundance, scale, and environmental correlations. Warmer temperatures increased biomass directly, presumably by raising metabolism, and indirectly by increasing diversity, whereas temperature variability reduced biomass. Importantly, diversity and climate interact, with biomass of diverse communities less affected by rising and variable temperatures than species-poor communities. Biodiversity thus buffers global fish biomass from climate change, and conservation of marine biodiversity can stabilize fish production in a changing ocean.

Correlation of resource plays and biodiversity patterns: accumulation of organic-rich shale tracks taxonomic turnover

Science.gov (United States)

Eoff, Jennifer D.

2012-01-01

Similar paleogeographic and paleotectonic settings characterize most self-sourced shale hydrocarbon plays. Their deposition occurred within similar orders of magnitude of eustatic events and during geologic periods characterized by “warm” (or transitional) climates and calcitic seas. In addition, the stratigraphic occurrence of shale plays parallels certain historical patterns of marine metazoan biodiversity. Such strong agreement among several correlation tools elucidates why these resources may be limited to discrete intervals of geological time. Correlation of self-sourced shale with biodiversity trends indicates that the factors controlling the deposition of marine organic matter may not be independent of those that induced taxonomic turnover. Paleoecological changes promoted accumulation and preservation of Type II kerogen. Deposition of self-sourced shale appears to correspond to reductions in absolute biodiversity and declining percentages of bioturbating taxa, with concomitant increases in proportions of pelagic taxa relative to infaunal and epifaunal organisms. Whereas upwelling and anoxia may have contributed to the deposition of kerogen in source rocks throughout much of the sedimentary record, diminished consumption of biomass by benthic metazoans likely augmented the preservation of organic carbon during deposition of this shale type. Rapid tectonic-plate reconfiguration induced coeval events, creating basins with sufficiently high rates of accommodation creation necessary to preserve additional organic material accumulating as the heterotrophic benthos suffered in response to rapidly changing environments. Combining sea-level curves, paleogeography, climate, and seawater chemistry provides a first-order approximation of the distribution of potential self-sourced shale in the geologic record. A model that predicts the stratigraphic distribution of self-sourced-shale deposition can aid in exploration of continuous hydrocarbon accumulations in self

Biodiversity conservation in agricultural landscapes

OpenAIRE

Josefsson, Jonas

2015-01-01

Agricultural industrialization alters rural landscapes in Europe, causing large-scale and rapid loss of important biodiversity. The principal instruments to protect farmland biodiversity are various agri-environmental measures (AEMs) in the EU Common Agricultural Policy (CAP). However, growing awareness of shortcomings to CAP biodiversity integration prompts examination of causes and potential solutions. This thesis assesses the importance of structural heterogeneity of crop and non-crop habi...

Book Review: Marine Protected Areas in International Law: an Arctic Perspective

Directory of Open Access Journals (Sweden)

Davina Oktivana

2017-10-01

Full Text Available Marine biodiversity has always become an interesting topic in the development of the law of the sea subject. Despite of human dependence on marine resources, human intervention has been proven as the major threats to the sustainability of marine biodiversity and marine environment protection. Human activities, such an over-exploitation, shipping pollution, the use endangered fishing tools and above all, climate change, have changes the ecosystems extensively. One of the significant measures to prevent broaden the catastrophe is the establishment of Marine Protected Areas (MPAs, which has been accepted as a tool for protection and conservation of marine biodiversity. The book provides a comprehensive observation and analysis of the MPAs' concept and its implementation, specifically in the Arctic. This book is based on Ingvild Ulrikke Jakobsen's PhD thesis at the University of Tromsø, Norwegia. Her concerned particularly based on the development of human activities in the Arctic, that will definitely affect the fragile marine environment and there is an increasing need to ensure environmental protection and conservation of marine biodiversity and ecosystems in Arctic.

High bacterial biodiversity increases degradation performance of hydrocarbons during bioremediation of contaminated harbor marine sediments

International Nuclear Information System (INIS)

Dell'Anno, Antonio; Beolchini, Francesca; Rocchetti, Laura; Luna, Gian Marco; Danovaro, Roberto

2012-01-01

We investigated changes of bacterial abundance and biodiversity during bioremediation experiments carried out on oxic and anoxic marine harbor sediments contaminated with hydrocarbons. Oxic sediments, supplied with inorganic nutrients, were incubated in aerobic conditions at 20 °C and 35 °C for 30 days, whereas anoxic sediments, amended with organic substrates, were incubated in anaerobic conditions at the same temperatures for 60 days. Results reported here indicate that temperature exerted the main effect on bacterial abundance, diversity and assemblage composition. At higher temperature bacterial diversity and evenness increased significantly in aerobic conditions, whilst decreased in anaerobic conditions. In both aerobic and anaerobic conditions, biodegradation efficiencies of hydrocarbons were significantly and positively related with bacterial richness and evenness. Overall results presented here suggest that bioremediation strategies, which can sustain high levels of bacterial diversity rather than the selection of specific taxa, may significantly increase the efficiency of hydrocarbon degradation in contaminated marine sediments. - Highlights: ► Bioremediation performance was investigated on hydrocarbon contaminated sediments. ► Major changes in bacterial diversity and assemblage composition were observed. ► Temperature exerted the major effect on bacterial assemblages. ► High bacterial diversity increased significantly biodegradation performance. ► This should be considered for sediment remediation by bio-treatments. - Bioremediation strategies which can sustain high levels of bacterial diversity may significantly increase the biodegradation of hydrocarbons in contaminated marine sediments.

Oceans of Discourses:Utilizing Q methodology or analyzing perceptions on marine biodiversity conservation in the Kogelberg Biosphere Reserve,South Africa

Directory of Open Access Journals (Sweden)

Kristin Hagan

2016-09-01

Full Text Available This paper attempts to empirically investigate perceptions regarding marine biodiversity conservation among different stakeholders of the Kogelberg Biosphere Reserve, South Africa. The study’s data was collected by following Q methodology in combination with semi-structured interviews and participant observation. Q methodology combines elements from quantitative and qualitative research traditions, providing researchers with a systematic and rigorous means to study human subjectivities. Primary data were gathered from stakeholders who either live, work, or have performed research in the Kogelberg Biosphere Reserve. A combination of interpretative discourse analysis and Q factor analysis was employed to identify perceptions. The results reveal that there are two operating discourses with clear stakeholder divisions. The science discourse is characterized by its scientific management-based ecological approach. On the other hand, the livelihoods discourse is primarily concerned about the social implications brought about by Kogelberg as a biosphere reserve. The paper goes on to argue that the meaning people attach to the concept of ‘marine biodiversity conservation’ is relational as it is based on their lived experience. It further highlights the importance of performing context-specific social research of protected areas, as it is difficult for conservation projects to meet both ecological and social needs without understanding the viewpoints of engaged stakeholders and local communities.

Biodiversity Scenarios: Projections of 21st century change in biodiversity and associated ecosystem services

CSIR Research Space (South Africa)

Scholes, B

2010-01-01

Full Text Available �cation on biodiversity can be mini- mized by appropriate agricultural practices. n International regulation of �shing in non-terri- torial waters and improved governance at local to global scales are key to avoiding wide- spread modi�cations of marine food chains...

Fish Biodiversity Patterns in Reef Communities of the Southeastern Coast of Brazil

Directory of Open Access Journals (Sweden)

Ralf Riedel

2015-10-01

Full Text Available Marine Protected Areas are increasingly becoming a tool of choice for conservation and management of marine resources and ecosystems. Data on biodiversity are necessary to assist in establishing protected areas for conservation objectives to be met. Toward that effect, we investigated reef biodiversity patterns in three large-scale coastal regions of Brazil. The study areas comprised of an upwelling region, an adjacent high impacted region, and a more distant marine park. We surveyed four reef sites in each study region. Fish species and abundance, substrate relief, and water temperature were recorded during the surveys. Biodiversity was estimated using Simpson’s and Shannon’s indices on species richness and abundance. Fish diversity was highest at the upwelling area. No difference in diversity was observed between the high impacted region and the marine park. No substrate relief patterns were found. Temperature readings showed higher frequency of low temperature episodic events at the upwelling region. Our results favor the upwelling region for establishment of a Marine Protected Area. Moreover, the similar diversity between the high impacted region and the marine park showed evidence of spillover effects from the upwelling into the high impacted region, further demonstrating the importance of the upwelling region for conservation.

Synthesis Report As part of the project Biodiversity of the High Seas

OpenAIRE

Rijnsdorp, A.D.; Molenaar, E.J.; Oude Elferink, A.G.; Heessen, H.J.L.; Karman, C.C.

2009-01-01

Human activities in areas outside national jurisdiction (ABNJ) which comprise the high seas and the ‘Area’ (the seabed beyond the limits of national jurisdiction) are increasing and may threaten marine biodiversity in these areas. While fisheries are in general considered as the most threatening, other activities such as mining, shipping, tourism, bio-prospecting, marine scientific research, pollution, and military activities also play more or less important roles. Threats to biodiversity con...

Submerged oceanic shoals of north Western Australia are a major reservoir of marine biodiversity

Science.gov (United States)

Moore, Cordelia; Cappo, Mike; Radford, Ben; Heyward, Andrew

2017-09-01

This paper provides a first assessment of fish communities associated with the submerged oceanic banks and shoals in north-west Australia. Until recently, little was known about these deeper and more inaccessible reefs. The mesophotic coral-reef habitats (20-80 m) were a major reservoir of marine biodiversity, with unique and exceptionally high fish diversity and abundance. Species richness in the study region was 1.4 times, and abundance almost twice, that recorded for similar mesophotic habitats on the Great Barrier Reef in north-east Australia. A review of the published literature revealed that Australia's NW oceanic shoals support the highest fish species richness reported for mesophotic reefs to date. We made regional comparisons of fish community structure (species composition, richness and abundance) and assessed the influence of depth, substrate and location. The presence of consolidated calcareous reef, depth and aspect (a surrogate for exposure) had the greatest influence on species richness. In contrast, aspect and the presence of benthic biota had the greatest influence on fish abundance. Sites most exposed to the prevailing currents (facing north-east) had lowest fish abundance, while highest abundances were recorded on moderately exposed sites (along the north-west and south-east edges). The most abundant species were small ( Pomacentrus coelestis) and large ( Naso hexacanthus) planktivorous fish. Currently, 29.3% of NE Australia mesophotic reefs are within no-take management zones of the Great Barrier Reef. In contrast, just 1.3% of the NW oceanic shoals are designated as no-take areas. The location and extent of mesophotic reefs remain poorly quantified globally. Because these habitats support significant biodiversity and have the potential to act as important refugia, understanding their extent is critical to maintaining coral-reef biodiversity and resilience and supporting sustainable management.

A good compromise: rapid and robust species proxies for inventorying biodiversity hotspots using the Terebridae (Gastropoda: Conoidea).

Science.gov (United States)

Modica, Maria Vittoria; Puillandre, Nicolas; Castelin, Magalie; Zhang, Yu; Holford, Mandë

2014-01-01

Devising a reproducible approach for species delimitation of hyperdiverse groups is an ongoing challenge in evolutionary biology. Speciation processes combine modes of passive and adaptive trait divergence requiring an integrative taxonomy approach to accurately generate robust species hypotheses. However, in light of the rapid decline of diversity on Earth, complete integrative approaches may not be practical in certain species-rich environments. As an alternative, we applied a two-step strategy combining ABGD (Automated Barcode Gap Discovery) and Klee diagrams, to balance speed and accuracy in producing primary species hypotheses (PSHs). Specifically, an ABGD/Klee approach was used for species delimitation in the Terebridae, a neurotoxin-producing marine snail family included in the Conoidea. Delimitation of species boundaries is problematic in the Conoidea, as traditional taxonomic approaches are hampered by the high levels of variation, convergence and morphological plasticity of shell characters. We used ABGD to analyze gaps in the distribution of pairwise distances of 454 COI sequences attributed to 87 morphospecies and obtained 98 to 125 Primary Species Hypotheses (PSHs). The PSH partitions were subsequently visualized as a Klee diagram color map, allowing easy detection of the incongruences that were further evaluated individually with two other species delimitation models, General Mixed Yule Coalescent (GMYC) and Poisson Tree Processes (PTP). GMYC and PTP results confirmed the presence of 17 putative cryptic terebrid species in our dataset. The consensus of GMYC, PTP, and ABGD/Klee findings suggest the combination of ABGD and Klee diagrams is an effective approach for rapidly proposing primary species proxies in hyperdiverse groups and a reliable first step for macroscopic biodiversity assessment.

The Southern Ocean deep sea: first insights into biodiversity and biogeography

DEFF Research Database (Denmark)

Brandt, A.; Brix, S.; Brökeland, W.

2007-01-01

Shallow marine benthic communities around Antarctica show high levels of endemism, gigantism, slow growth, longevity and late maturity, as well as adaptive radiations that have generated considerable biodiversity in some taxa1. The deeper parts of the Southern Ocean exhibit some unique environmen......Shallow marine benthic communities around Antarctica show high levels of endemism, gigantism, slow growth, longevity and late maturity, as well as adaptive radiations that have generated considerable biodiversity in some taxa1. The deeper parts of the Southern Ocean exhibit some unique...

Will life find a way? Evolution of marine species under global change.

Science.gov (United States)

Calosi, Piero; De Wit, Pierre; Thor, Peter; Dupont, Sam

2016-10-01

Projections of marine biodiversity and implementation of effective actions for its maintenance in the face of current rapid global environmental change are constrained by our limited understanding of species' adaptive responses, including transgenerational plasticity, epigenetics and natural selection. This special issue presents 13 novel studies, which employ experimental and modelling approaches to (i) investigate plastic and evolutionary responses of marine species to major global change drivers; (ii) ask relevant broad eco-evolutionary questions, implementing multiple species and populations studies; (iii) show the advantages of using advanced experimental designs and tools; (iv) construct novel model organisms for marine evolution; (v) help identifying future challenges for the field; and (vi) highlight the importance of incorporating existing evolutionary theory into management solutions for the marine realm. What emerges is that at least some populations of marine species have the ability to adapt to future global change conditions. However, marine organisms' capacity for adaptation appears finite, due to evolutionary trade-offs and possible rapid losses in genetic diversity. This further corroborates the idea that acquiring an evolutionary perspective on how marine life will respond to the selective pressure of future global changes will guide us in better identifying which conservation efforts will be most needed and most effective.

Marine genomics

DEFF Research Database (Denmark)

Oliveira Ribeiro, Ângela Maria; Foote, Andrew David; Kupczok, Anne

2017-01-01

Marine ecosystems occupy 71% of the surface of our planet, yet we know little about their diversity. Although the inventory of species is continually increasing, as registered by the Census of Marine Life program, only about 10% of the estimated two million marine species are known. This lag......-throughput sequencing approaches have been helping to improve our knowledge of marine biodiversity, from the rich microbial biota that forms the base of the tree of life to a wealth of plant and animal species. In this review, we present an overview of the applications of genomics to the study of marine life, from...

Using insights from animal behaviour and behavioural ecology to inform marine conservation initiatives.

Science.gov (United States)

Brooker, Rohan M; Feeney, William E; White, James R; Manassa, Rachel P; Johansen, Jacob L; Dixson, Danielle L

2016-10-01

The impacts of human activities on the natural world are becoming increasingly apparent, with rapid development and exploitation occurring at the expense of habitat quality and biodiversity. Declines are especially concerning in the oceans, which hold intrinsic value due to their biological uniqueness as well as their substantial sociological and economic importance. Here, we review the literature and investigate whether incorporation of knowledge from the fields of animal behaviour and behavioural ecology may improve the effectiveness of conservation initiatives in marine systems. In particular, we consider (1) how knowledge of larval behaviour and ecology may be used to inform the design of marine protected areas, (2) how protecting species that hold specific ecological niches may be of particular importance for maximizing the preservation of biodiversity, (3) how current harvesting techniques may be inadvertently skewing the behavioural phenotypes of stock populations and whether changes to current practices may lessen this skew and reinforce population persistence, and (4) how understanding the behavioural and physiological responses of species to a changing environment may provide essential insights into areas of particular vulnerability for prioritized conservation attention. The complex nature of conservation programmes inherently results in interdisciplinary responses, and the incorporation of knowledge from the fields of animal behaviour and behavioural ecology may increase our ability to stem the loss of biodiversity in marine environments.

Marine conservation strategies for Maharashtra Coast

Digital Repository Service at National Institute of Oceanography (India)

Untawale, A.G.; Dhargalkar, V.K.

, Wildlife Sanctuaries, Marine Parks and Protected Areas. Detailed studies of 37 sites along the Maharashtra Coast, for their marine biota and also the ecological conditions, were taken up. Out of these, seven most luxuriant areas in marine biodiversity have...

Stakeholder perceptions of decision-making process on marine biodiversity conservation on sal island (Cape Verde

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Jorge Ramos

2011-01-01

Full Text Available In the Sal Island (Cape Verde there is a growing involvement, will and investment in the creation of tourism synergies. However, much of the economic potential of the island can be found submerged in the sea: it is its intrinsic 'biodiversity'. Due to this fact, and in order to balance environmental safety and human pressure, it has been developed a strategy addressing both diving and fishing purposes. That strategy includes the deployment of several artificial reefs (ARs around the island. In order to allocate demand for diving and fishing purposes, we have developed a socio-economic research approach addressing the theme of biodiversity and reefs (both natural and artificial and collected expectations from AR users by means of an inquiry method. It is hypothesized a project where some management measures are proposed aiming marine biodiversity conservation. Using the methodology named as analytic hierarchy process (AHP it was scrutinized stakeholders' perception on the best practice for marine biodiversity conservation in the Sal Island. The results showed that to submerge obsolete structures in rocky or mixed areas have a high potential, but does not gathers consensuality. As an overall conclusion, it seems that limitation of activities is the preferred management option to consider in the future.Na Ilha do Sal (Cabo Verde existe um crescente envolvimento, vontade e investimento na criação de sinergias turísticas. Contudo, muito do potencial económico da ilha está submerso - a biodiversidade marinha. Devido a este facto, e tendo em vista promover a sustentabilidade ambiental associada ao eco-turismo, vem sendo desenvolvida uma estratégia direccionada, quer ao mergulho, quer à pesca. Esta estratégia inclui a implantação de vários recifes artificiais (RA na Baía de Santa Maria. De modo a alocar a procura para propósitos como o mergulho e a pesca, desenvolvemos um plano de pesquisa socio-económica relativo ao tema da biodiversidade

The Biodiversity of the Mediterranean Sea: Estimates, Patterns, and Threats

OpenAIRE

Coll, Marta; Piroddi, Chiara; Steenbeek, Jeroen; Kaschner, Kristin; Ben Rais Lasram, Frida; Aguzzi, Jacopo; Ballesteros, Enric; Bianchi, Carlo Nike; Corbera, Jordi; Dailianis, Thanos; Danovaro, Roberto; Estrada, Marta; Froglia, Carlo; Galil, Bella S.; Gasol, Josep M.

2010-01-01

The Mediterranean Sea is a marine biodiversity hot spot. Here we combined an extensive literature analysis with expert opinions to update publicly available estimates of major taxa in this marine ecosystem and to revise and update several species lists. We also assessed overall spatial and temporal patterns of species diversity and identified major changes and threats. Our results listed approximately 17,000 marine species occurring in the Mediterra- nean Sea. However, our estimates of marine...

Competence of Litter Ants for Rapid Biodiversity Assessments

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T. H. Saumya E. Silva

2017-01-01

Full Text Available Rapid Biodiversity Assessment approaches associated with focusing taxa have overcome many of the problems related to large scale surveys. This study examined the suitability of litter ants as a focusing taxon by checking whether diversity and species assemblages of litter ants reflect the overall picture of arthropod diversity and assemblages in leaf litter in two vegetation types: secondary forest and pine plantation in Upper Hanthana forest reserve, Sri Lanka. In each vegetation type, arthropods were sampled using three sampling methods (Winkler extraction, hand collection, and pitfall traps along three 100 m line transects. From the two sites, 1887 litter ants (34 species and 3488 litter arthropods (52 species were collected. Species assemblages composition of both ants and other arthropods differed significantly between the two sites (ANOSIM, p=0.001 with both groups generating distinct clusters for the two sites (SIMPROF, p=0.001. But there was no significant correlation (p>0.05 between abundance and richness of litter ants and those of other arthropods in both vegetation types. The overall finding suggests that the litter ants do not reflect the holistic picture of arthropod diversity and assemblages in leaf litter, but the quality of the habitat for the survival of all litter arthropods.

How Essential Biodiversity Variables and remote sensing can help national biodiversity monitoring

Directory of Open Access Journals (Sweden)

Petteri Vihervaara

2017-04-01

Full Text Available Essential Biodiversity Variables (EBVs have been suggested to harmonize biodiversity monitoring worldwide. Their aim is to provide a small but comprehensive set of monitoring variables that would give a balanced picture of the development of biodiversity and the reaching of international and national biodiversity targets. Globally, GEO BON (Group on Earth Observations Biodiversity Observation Network has suggested 22 candidate EBVs to be monitored. In this article we regard EBVs as a conceptual tool that may help in making national scale biodiversity monitoring more robust by pointing out where to focus further development resources. We look at one country –Finland –with a relatively advanced biodiversity monitoring scheme and study how well Finland’s current biodiversity state indicators correspond with EBVs. In particular, we look at how national biodiversity monitoring could be improved by using available remote sensing (RS applications. Rapidly emerging new technologies from drones to airborne laser scanning and new satellite sensors providing imagery with very high resolution (VHR open a whole new world of opportunities for monitoring the state of biodiversity and ecosystems at low cost. In Finland, several RS applications already exist that could be expanded into national indicators. These include the monitoring of shore habitats and water quality parameters, among others. We hope that our analysis and examples help other countries with similar challenges. Along with RS opportunities, our analysis revealed also some needs to develop the EBV framework itself.

Climate constrains the evolutionary history and biodiversity of crocodylians.

Science.gov (United States)

Mannion, Philip D; Benson, Roger B J; Carrano, Matthew T; Tennant, Jonathan P; Judd, Jack; Butler, Richard J

2015-09-24

The fossil record of crocodylians and their relatives (pseudosuchians) reveals a rich evolutionary history, prompting questions about causes of long-term decline to their present-day low biodiversity. We analyse climatic drivers of subsampled pseudosuchian biodiversity over their 250 million year history, using a comprehensive new data set. Biodiversity and environmental changes correlate strongly, with long-term decline of terrestrial taxa driven by decreasing temperatures in northern temperate regions, and biodiversity decreases at lower latitudes matching patterns of increasing aridification. However, there is no relationship between temperature and biodiversity for marine pseudosuchians, with sea-level change and post-extinction opportunism demonstrated to be more important drivers. A 'modern-type' latitudinal biodiversity gradient might have existed throughout pseudosuchian history, and range expansion towards the poles occurred during warm intervals. Although their fossil record suggests that current global warming might promote long-term increases in crocodylian biodiversity and geographic range, the 'balancing forces' of anthropogenic environmental degradation complicate future predictions.

Biodiversity analysis by polyphasic study of marine bacteria associated with biocorrosion phenomena.

Science.gov (United States)

Boudaud, N; Coton, M; Coton, E; Pineau, S; Travert, J; Amiel, C

2010-07-01

A polyphasic approach was used to study the biodiversity bacteria associated with biocorrosion processes, in particular sulfate-reducing bacteria (SRB) and thiosulfate-reducing bacteria (TRB) which are described to be particularly aggressive towards metallic materials, notably via hydrogen sulfide release. To study this particular flora, an infrared spectra library of 22 SRB and TRB collection strains were created using a Common Minimum Medium (CMM) developed during this study and standardized culture conditions. The CMM proved its ability to allow for growth of both SRB and TRB strains. These sulfurogen collection strains were clearly discriminated and differentiated at the genus level by fourier transform infrared (FT-IR) spectroscopy. In a second step, infrared spectra of isolates, recovered from biofilms formed on carbon steel coupons immersed for 1 year in three different French harbour areas, were compared to the infrared reference spectra library. In parallel, molecular methods (M13-PCR and 16S rRNA gene sequencing) were used to qualitatively evaluate the intra- and inter-species genetic diversity of biofilm isolates. The biodiversity study indicated that strains belonging to the Vibrio genus were the dominant population; strains belonging to the Desulfovibrio genus (SRB) and Peptostreptococcaceae were also identified. Overall, the combination of the FT-IR spectroscopy and molecular approaches allowed for the taxonomic and ecological study of a bacterial flora, cultivated on CMM, associated with microbiology-induced corrosion (MIC) processes. Via the use of the CMM medium, the culture of marine bacteria (including both SRB and TRB bacteria) was allowed, and the implication of nonsulforogen bacteria in MIC was observed. Their involvement in the biocorrosion phenomena will have to be studied and taken into account in the future. © 2009 The Authors. Journal compilation © 2009 The Society for Applied Microbiology.

Molecular biodiversity of Red Sea demosponges

International Nuclear Information System (INIS)

Erpenbeck, Dirk; Voigt, Oliver; Al-Aidaroos, Ali M.; Berumen, Michael L.; Büttner, Gabriele; Catania, Daniela; Guirguis, Adel Naguib; Paulay, Gustav; Schätzle, Simone

2016-01-01

Sponges are important constituents of coral reef ecosystems, including those around the Arabian Peninsula. Despite their importance, our knowledge on demosponge diversity in this area is insufficient to recognize, for example, faunal changes caused by anthropogenic disturbances. We here report the first assessment of demosponge molecular biodiversity from Arabia, with focus on the Saudi Arabian Red Sea, based on mitochondrial and nuclear ribosomal molecular markers gathered in the framework of the Sponge Barcoding Project. We use a rapid molecular screening approach on Arabian demosponge collections and analyze results in comparison against published material in terms of biodiversity. We use a variable region of 28S rDNA, applied for the first time in the assessment of demosponge molecular diversity. Our data constitutes a solid foundation for a future more comprehensive understanding of sponge biodiversity of the Red Sea and adjacent waters. - Highlights: •First assessment of demosponge molecular biodiversity from Arabia •Rapid molecular screening approach on Arabian demosponge collections •Assessment of 28S 'C-Region' for demosponge barcoding •Data for a future comprehensive understanding of sponge biodiversity of the Red Sea

Biodiversity of Pigmented Fungi Isolated from Marine Environment in La Réunion Island, Indian Ocean: New Resources for Colored Metabolites

Directory of Open Access Journals (Sweden)

Mireille Fouillaud

2017-07-01

Full Text Available Marine ecosystems cover about 70% of the planet surface and are still an underexploited source of useful metabolites. Among microbes, filamentous fungi are captivating organisms used for the production of many chemical classes of secondary metabolites bound to be used in various fields of industrial application. The present study was focused on the collection, isolation, screening and genotyping of pigmented filamentous fungi isolated from tropical marine environments around La Réunion Island, Indian Ocean. About 150 micromycetes were revived and isolated from 14 marine samples (sediments, living corals, coral rubble, sea water and hard substrates collected in four different locations. Forty-two colored fungal isolates belonging to 16 families, 25 genera and 31 species were further studied depending on their ability to produce pigments and thus subjected to molecular identification. From gene sequence analysis, the most frequently identified colored fungi belong to the widespread Penicillium, Talaromyces and Aspergillus genera in the family Trichocomaceae (11 species, then followed by the family Hypocreaceae (three species. This study demonstrates that marine biotopes in La Réunion Island, Indian Ocean, from coral reefs to underwater slopes of this volcanic island, shelter numerous species of micromycetes, from common or uncommon genera. This unstudied biodiversity comes along with the ability for some fungal marine inhabitants, to produce a range of pigments and hues.

Dangerous Climate Velocities from Geoengineering Termination: Potential Biodiversity Impacts

Science.gov (United States)

Trisos, C.; Gurevitch, J.; Zambri, B.; Xia, L.; Amatulli, G.; Robock, A.

2016-12-01

Geoengineering has been suggested as a potential societal response to the impacts of ongoing global warming. If ongoing mitigation and adaptation measures do not prevent the most dangerous consequences of climate change, it is important to study whether solar radiation management would make the world less dangerous. While impacts of albedo modification on temperature, precipitation, and agriculture have been studied before, here for the first time we investigate its potential ecological impacts. We estimate the speeds marine and terrestrial ecosystems will need to move to remain in their current climate conditions (i.e., climate velocities) in response to the implementation and subsequent termination of geoengineering. We take advantage of climate model simulations conducted using the G4 scenario of the Geoengineering Model Intercomparison Project, in which increased radiative forcing from the RCP4.5 scenario is balanced by a stratospheric aerosol cloud produced by an injection of 5 Tg of SO2 per year into the lower stratosphere for 50 years, and then stopped. The termination of geoengineering is projected to produce a very rapid warming of the climate, resulting in climate velocities much faster than those that will be produced from anthropogenic global warming. Should ongoing geoengineering be terminated abruptly due to society losing the means or will to continue, the resulting ecological impacts, as measured by climate velocities, could be severe for many terrestrial and marine biodiversity hotspots. Thus, the implementation of solar geoengineering represents a potential danger not just to humans, but also to biodiversity globally.

Recent trends in local-scale marine biodiversity reflect community structure and human impacts

NARCIS (Netherlands)

Elahi, Robin; O'Connor, Mary I; Byrnes, Jarrett E K; Dunic, Jillian; Eriksson, Britas Klemens; Hensel, Marc J S; Kearns, Patrick J

2015-01-01

The modern biodiversity crisis reflects global extinctions and local introductions. Human activities have dramatically altered rates and scales of processes that regulate biodiversity at local scales [1-7]. Reconciling the threat of global biodiversity loss [2, 4, 6-9] with recent evidence of

Marine Science

African Journals Online (AJOL)

pod diversity and distribution are important especially since studies on marine biodiversity are scarce .... Method II –. Zamoum &. Furla (2012) protocol. Method III. – Geist et al (2008) protocol ..... Public Library Of Science One 8: 51273.

Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia

Directory of Open Access Journals (Sweden)

Jane Fromont

2016-10-01

Full Text Available This study assessed the biodiversity of sponges within the Integrated Marine and Coastal Regionalisation for Australia (IMCRA bioregions of the Pilbara using datasets amalgamated from the Western Australian Museum and the Atlas of Living Australia. The Pilbara accounts for a total of 1164 Linnean and morphospecies. A high level of “apparent endemism” was recorded with 78% of species found in only one of six bioregions, with less than 10% confirmed as widely distributed. The Ningaloo, Pilbara Nearshore and Pilbara Offshore bioregions are biodiversity hotspots (>250 species and are recognised as having the highest conservation value, followed by North West Shelf containing 232 species. Species compositions differed between bioregions, with those that are less spatially separated sharing more species. Notably, the North West Province bioregion (110 species exhibited the most distinct species composition, highlighting it as a unique habitat within the Pilbara. While sponge biodiversity is apparently high, incomplete sampling effort for the region was identified, with only two sampling events recorded for the Central West Transition bioregion. Furthermore, only 15% of records in the dataset are presently described (Linnean species, highlighting the continuing need for taxonomic expertise for the conservation and management of marine biodiversity resources.

Marine metagenomics: strategies for the discovery of novel enzymes with biotechnological applications from marine environments

Directory of Open Access Journals (Sweden)

Dobson Alan DW

2008-08-01

Full Text Available Abstract Metagenomic based strategies have previously been successfully employed as powerful tools to isolate and identify enzymes with novel biocatalytic activities from the unculturable component of microbial communities from various terrestrial environmental niches. Both sequence based and function based screening approaches have been employed to identify genes encoding novel biocatalytic activities and metabolic pathways from metagenomic libraries. While much of the focus to date has centred on terrestrial based microbial ecosystems, it is clear that the marine environment has enormous microbial biodiversity that remains largely unstudied. Marine microbes are both extremely abundant and diverse; the environments they occupy likewise consist of very diverse niches. As culture-dependent methods have thus far resulted in the isolation of only a tiny percentage of the marine microbiota the application of metagenomic strategies holds great potential to study and exploit the enormous microbial biodiversity which is present within these marine environments.

Plate tectonic regulation of global marine animal diversity

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Zaffos, Andrew; Finnegan, Seth; Peters, Shanan E.

2017-05-01

Valentine and Moores [Valentine JW, Moores EM (1970) Nature 228:657-659] hypothesized that plate tectonics regulates global biodiversity by changing the geographic arrangement of continental crust, but the data required to fully test the hypothesis were not available. Here, we use a global database of marine animal fossil occurrences and a paleogeographic reconstruction model to test the hypothesis that temporal patterns of continental fragmentation have impacted global Phanerozoic biodiversity. We find a positive correlation between global marine invertebrate genus richness and an independently derived quantitative index describing the fragmentation of continental crust during supercontinental coalescence-breakup cycles. The observed positive correlation between global biodiversity and continental fragmentation is not readily attributable to commonly cited vagaries of the fossil record, including changing quantities of marine rock or time-variable sampling effort. Because many different environmental and biotic factors may covary with changes in the geographic arrangement of continental crust, it is difficult to identify a specific causal mechanism. However, cross-correlation indicates that the state of continental fragmentation at a given time is positively correlated with the state of global biodiversity for tens of millions of years afterward. There is also evidence to suggest that continental fragmentation promotes increasing marine richness, but that coalescence alone has only a small negative or stabilizing effect. Together, these results suggest that continental fragmentation, particularly during the Mesozoic breakup of the supercontinent Pangaea, has exerted a first-order control on the long-term trajectory of Phanerozoic marine animal diversity.

Towards a meaningful assessment of marine ecological impacts in life cycle assessment (LCA).

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Woods, John S; Veltman, Karin; Huijbregts, Mark A J; Verones, Francesca; Hertwich, Edgar G

2016-01-01

Human demands on marine resources and space are currently unprecedented and concerns are rising over observed declines in marine biodiversity. A quantitative understanding of the impact of industrial activities on the marine environment is thus essential. Life cycle assessment (LCA) is a widely applied method for quantifying the environmental impact of products and processes. LCA was originally developed to assess the impacts of land-based industries on mainly terrestrial and freshwater ecosystems. As such, impact indicators for major drivers of marine biodiversity loss are currently lacking. We review quantitative approaches for cause-effect assessment of seven major drivers of marine biodiversity loss: climate change, ocean acidification, eutrophication-induced hypoxia, seabed damage, overexploitation of biotic resources, invasive species and marine plastic debris. Our review shows that impact indicators can be developed for all identified drivers, albeit at different levels of coverage of cause-effect pathways and variable levels of uncertainty and spatial coverage. Modeling approaches to predict the spatial distribution and intensity of human-driven interventions in the marine environment are relatively well-established and can be employed to develop spatially-explicit LCA fate factors. Modeling approaches to quantify the effects of these interventions on marine biodiversity are less well-developed. We highlight specific research challenges to facilitate a coherent incorporation of marine biodiversity loss in LCA, thereby making LCA a more comprehensive and robust environmental impact assessment tool. Research challenges of particular importance include i) incorporation of the non-linear behavior of global circulation models (GCMs) within an LCA framework and ii) improving spatial differentiation, especially the representation of coastal regions in GCMs and ocean-carbon cycle models. Copyright © 2016 Elsevier Ltd. All rights reserved.

Diverse effects of invasive ecosystem engineers on marine biodiversity and ecosystem functions: A global review and meta-analysis.

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Guy-Haim, Tamar; Lyons, Devin A; Kotta, Jonne; Ojaveer, Henn; Queirós, Ana M; Chatzinikolaou, Eva; Arvanitidis, Christos; Como, Serena; Magni, Paolo; Blight, Andrew J; Orav-Kotta, Helen; Somerfield, Paul J; Crowe, Tasman P; Rilov, Gil

2018-03-01

Invasive ecosystem engineers (IEE) are potentially one of the most influential types of biological invaders. They are expected to have extensive ecological impacts by altering the physical-chemical structure of ecosystems, thereby changing the rules of existence for a broad range of resident biota. To test the generality of this expectation, we used a global systematic review and meta-analysis to examine IEE effects on the abundance of individual species and communities, biodiversity (using several indices) and ecosystem functions, focusing on marine and estuarine environments. We found that IEE had a significant effect (positive and negative) in most studies testing impacts on individual species, but the overall (cumulative) effect size was small and negative. Many individual studies showed strong IEE effects on community abundance and diversity, but the direction of effects was variable, leading to statistically non-significant overall effects in most categories. In contrast, there was a strong overall effect on most ecosystem functions we examined. IEE negatively affected metabolic functions and primary production, but positively affected nutrient flux, sedimentation and decomposition. We use the results to develop a conceptual model by highlighting pathways whereby IEE impact communities and ecosystem functions, and identify several sources of research bias in the IEE-related invasion literature. Only a few of the studies simultaneously quantified IEE effects on community/diversity and ecosystem functions. Therefore, understanding how IEE may alter biodiversity-ecosystem function relationships should be a primary focus of future studies of invasion biology. Moreover, the clear effects of IEE on ecosystem functions detected in our study suggest that scientists and environmental managers ought to examine how the effects of IEE might be manifested in the services that marine ecosystems provide to humans. © 2017 John Wiley & Sons Ltd.

Efficacy of extracting indices from large-scale acoustic recordings to monitor biodiversity.

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Buxton, Rachel; McKenna, Megan F; Clapp, Mary; Meyer, Erik; Stabenau, Erik; Angeloni, Lisa M; Crooks, Kevin; Wittemyer, George

2018-04-20

Passive acoustic monitoring has the potential to be a powerful approach for assessing biodiversity across large spatial and temporal scales. However, extracting meaningful information from recordings can be prohibitively time consuming. Acoustic indices offer a relatively rapid method for processing acoustic data and are increasingly used to characterize biological communities. We examine the ability of acoustic indices to predict the diversity and abundance of biological sounds within recordings. First we reviewed the acoustic index literature and found that over 60 indices have been applied to a range of objectives with varying success. We then implemented a subset of the most successful indices on acoustic data collected at 43 sites in temperate terrestrial and tropical marine habitats across the continental U.S., developing a predictive model of the diversity of animal sounds observed in recordings. For terrestrial recordings, random forest models using a suite of acoustic indices as covariates predicted Shannon diversity, richness, and total number of biological sounds with high accuracy (R 2 > = 0.94, mean squared error MSE indices assessed, roughness, acoustic activity, and acoustic richness contributed most to the predictive ability of models. Performance of index models was negatively impacted by insect, weather, and anthropogenic sounds. For marine recordings, random forest models predicted Shannon diversity, richness, and total number of biological sounds with low accuracy (R 2 = 195), indicating that alternative methods are necessary in marine habitats. Our results suggest that using a combination of relevant indices in a flexible model can accurately predict the diversity of biological sounds in temperate terrestrial acoustic recordings. Thus, acoustic approaches could be an important contribution to biodiversity monitoring in some habitats in the face of accelerating human-caused ecological change. This article is protected by copyright. All rights

Changes in Reef Fish Abundances Associated with the Introduction of Indo-Pacific Lionfish to the Florida Keys National Marine Sanctuary: a Twenty Year Time Series.

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Hepner, M.; Muller-Karger, F. E.; Gittings, S.; Stallings, C.

2016-02-01

The Marine Biodiversity Observation Network (MBON) is a partnership between academic, private, and government researchers seeking to understand how marine biodiversity changes over long periods of time. In this context, a study of the multi-agency Reef Visual Census (RVC) data, collected over twenty years in the Florida Keys National Marine Sanctuary (FKNMS), was analyzed to measure possible changes in reef fish abundances as a result of possible predation by lionfish predation or due to related trophic cascading. Lionfish were first sighted in the FKNMS in January 2009, with abundances and frequency of occurrence increasing three to six fold throughout the sanctuary by 2011. Their high consumption rates of smaller fish, coupled with their rapidly increasing densities may be having a significant effect on coral reef fish communities. The study compares the natural variability in reef fish abundances from 1994-2009 in the FKNMS, 15 years prior to the first lionfish detected in the sanctuary, to changes in reef fish abundances 5 years after the invasion. The MBON project also aims to develop environmental DNA (eDNA) technology for conducting biodiversity assessments. eDNA is an emerging technique that seeks to quantify biodiversity in an area by obtaining genetic material directly from environmental samples (soil, sediment, water, etc.) without any obvious signs of biological source material. All marine organisms shed DNA into their surrounding habitat, leaving a "fingerprint." Similar to forensic science, the DNA can be collected from seawater and analyzed to determine what species were recently present. The MBON team is evaluating whether eDNA can be used to adequately monitor reef fish biodiversity in coral reef ecosystems. We will compare species detected in our samples to the taxonomic composition of reef fish communities at the sample site as recorded over the past twenty years in the Reef Visual Census data.

The real bounty: marine biodiversity in the Pitcairn Islands.

Directory of Open Access Journals (Sweden)

Alan M Friedlander

Full Text Available In 2012 we conducted an integrated ecological assessment of the marine environment of the Pitcairn Islands, which are four of the most remote islands in the world. The islands and atolls (Ducie, Henderson, Oeno, and Pitcairn are situated in the central South Pacific, halfway between New Zealand and South America. We surveyed algae, corals, mobile invertebrates, and fishes at 97 sites between 5 and 30 m depth, and found 51 new records for algae, 23 for corals, and 15 for fishes. The structure of the ecological communities was correlated with age, isolation, and geomorphology of the four islands. Coral and algal assemblages were significantly different among islands with Ducie having the highest coral cover (56% and Pitcairn dominated by erect macroalgae (42%. Fish biomass was dominated by top predators at Ducie (62% of total fish biomass and at Henderson (35%. Herbivorous fishes dominated at Pitcairn, while Oeno showed a balanced fish trophic structure. We found high levels of regional endemism in the fish assemblages across the islands (45%, with the highest level observed at Ducie (56% by number. We conducted the first surveys of the deep habitats around the Pitcairn Islands using drop-cameras at 21 sites from depths of 78 to 1,585 m. We observed 57 fish species from the drop-cams, including rare species such as the false catshark (Pseudotriakis microdon and several new undescribed species. In addition, we made observations of typically shallow reef sharks and other reef fishes at depths down to 300 m. Our findings highlight the uniqueness and high biodiversity value of the Pitcairn Islands as one of the least impacted in the Pacific, and suggest the need for immediate protection.

Marine biodiversity-ecosystem functions under uncertain environmental futures.

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Bulling, Mark T; Hicks, Natalie; Murray, Leigh; Paterson, David M; Raffaelli, Dave; White, Piran C L; Solan, Martin

2010-07-12

Anthropogenic activity is currently leading to dramatic transformations of ecosystems and losses of biodiversity. The recognition that these ecosystems provide services that are essential for human well-being has led to a major interest in the forms of the biodiversity-ecosystem functioning relationship. However, there is a lack of studies examining the impact of climate change on these relationships and it remains unclear how multiple climatic drivers may affect levels of ecosystem functioning. Here, we examine the roles of two important climate change variables, temperature and concentration of atmospheric carbon dioxide, on the relationship between invertebrate species richness and nutrient release in a model benthic estuarine system. We found a positive relationship between invertebrate species richness and the levels of release of NH(4)-N into the water column, but no effect of species richness on the release of PO(4)-P. Higher temperatures and greater concentrations of atmospheric carbon dioxide had a negative impact on nutrient release. Importantly, we found significant interactions between the climate variables, indicating that reliably predicting the effects of future climate change will not be straightforward as multiple drivers are unlikely to have purely additive effects, resulting in increased levels of uncertainty.

Building capacity in biodiversity monitoring at the global scale

Science.gov (United States)

Schmeller, Dirk S.; Bohm, Monika; Arvanitidis, Christos; Barber-Meyer, Shannon; Brummitt, Neil; Chandler, Mark; Chatzinikolaou, Eva; Costello, Mark J.; Ding, Hui; García-Moreno, Jaime; Gill, Michael J.; Haase, Peter; Jones, Miranda; Juillard, Romain; Magnusson, William E.; Martin, Corinne S.; McGeoch, Melodie A.; Mihoub, Jean-Baptiste; Pettorelli, Nathalie; Proença, Vânia; Peng, Cui; Regan, Eugenie; Schmiedel, Ute; Simsika, John P.; Weatherdon, Lauren; Waterman, Carly; Xu, Haigen; Belnap, Jayne

2017-01-01

Human-driven global change is causing ongoing declines in biodiversity worldwide. In order to address these declines, decision-makers need accurate assessments of the status of and pressures on biodiversity. However, these are heavily constrained by incomplete and uneven spatial, temporal and taxonomic coverage. For instance, data from regions such as Europe and North America are currently used overwhelmingly for large-scale biodiversity assessments due to lesser availability of suitable data from other, more biodiversity-rich, regions. These data-poor regions are often those experiencing the strongest threats to biodiversity, however. There is therefore an urgent need to fill the existing gaps in global biodiversity monitoring. Here, we review current knowledge on best practice in capacity building for biodiversity monitoring and provide an overview of existing means to improve biodiversity data collection considering the different types of biodiversity monitoring data. Our review comprises insights from work in Africa, South America, Polar Regions and Europe; in government-funded, volunteer and citizen-based monitoring in terrestrial, freshwater and marine ecosystems. The key steps to effectively building capacity in biodiversity monitoring are: identifying monitoring questions and aims; identifying the key components, functions, and processes to monitor; identifying the most suitable monitoring methods for these elements, carrying out monitoring activities; managing the resultant data; and interpreting monitoring data. Additionally, biodiversity monitoring should use multiple approaches including extensive and intensive monitoring through volunteers and professional scientists but also harnessing new technologies. Finally, we call on the scientific community to share biodiversity monitoring data, knowledge and tools to ensure the accessibility, interoperability, and reporting of biodiversity data at a global scale.

Conservation of biodiversity through taxonomy, data publication, and collaborative infrastructures.

Science.gov (United States)

Costello, Mark J; Vanhoorne, Bart; Appeltans, Ward

2015-08-01

Taxonomy is the foundation of biodiversity science because it furthers discovery of new species. Globally, there have never been so many people involved in naming species new to science. The number of new marine species described per decade has never been greater. Nevertheless, it is estimated that tens of thousands of marine species, and hundreds of thousands of terrestrial species, are yet to be discovered; many of which may already be in specimen collections. However, naming species is only a first step in documenting knowledge about their biology, biogeography, and ecology. Considering the threats to biodiversity, new knowledge of existing species and discovery of undescribed species and their subsequent study are urgently required. To accelerate this research, we recommend, and cite examples of, more and better communication: use of collaborative online databases; easier access to knowledge and specimens; production of taxonomic revisions and species identification guides; engagement of nonspecialists; and international collaboration. "Data-sharing" should be abandoned in favor of mandated data publication by the conservation science community. Such a step requires support from peer reviewers, editors, journals, and conservation organizations. Online data publication infrastructures (e.g., Global Biodiversity Information Facility, Ocean Biogeographic Information System) illustrate gaps in biodiversity sampling and may provide common ground for long-term international collaboration between scientists and conservation organizations. © 2015 Society for Conservation Biology.

Metazoan parasite species richness in Neotropical fishes: hotspots and the geography of biodiversity.

Science.gov (United States)

Luque, J L; Poulin, R

2007-06-01

Although research on parasite biodiversity has intensified recently, there are signs that parasites remain an underestimated component of total biodiversity in many regions of the planet. To identify geographical hotspots of parasite diversity, we performed qualitative and quantitative analyses of the parasite-host associations in fishes from Latin America and the Caribbean, a region that includes known hotspots of plant and animal biodiversity. The database included 10,904 metazoan parasite-host associations involving 1660 fish species. The number of host species with at least 1 parasite record was less than 10% of the total known fish species in the majority of countries. Associations involving adult endoparasites in actinopterygian fish hosts dominated the database. Across the whole region, no significant difference in parasite species richness was detected between marine and freshwater fishes. As a rule, host body size and study effort (number of studies per fish species) were good predictors of parasite species richness. Some interesting patterns emerged when we included only the regions with highest fish species biodiversity and study effort (Brazil, Mexico and the Caribbean Islands). Independently of differences in study effort or host body sizes, Mexico stands out as a hotspot of parasite diversity for freshwater fishes, as does Brasil for marine fishes. However, among 57 marine fish species common to all 3 regions, populations from the Caribbean consistently harboured more parasite species. These differences may reflect true biological patterns, or regional discrepancies in study effort and local priorities for fish parasitology research.

Climate change impacts on marine biodiversity, fisheries and society in the Arabian Gulf.

Directory of Open Access Journals (Sweden)

Colette C C Wabnitz

Full Text Available Climate change-reflected in significant environmental changes such as warming, sea level rise, shifts in salinity, oxygen and other ocean conditions-is expected to impact marine organisms and associated fisheries. This study provides an assessment of the potential impacts on, and the vulnerability of, marine biodiversity and fisheries catches in the Arabian Gulf under climate change. To this end, using three separate niche modelling approaches under a 'business-as-usual' climate change scenario, we projected the future habitat suitability of the Arabian Gulf (also known as the Persian Gulf for 55 expert-identified priority species, including charismatic and non-fish species. Second, we conducted a vulnerability assessment of national economies to climate change impacts on fisheries. The modelling outputs suggested a high rate of local extinction (up to 35% of initial species richness by 2090 relative to 2010. Spatially, projected local extinctions are highest in the southwestern part of the Gulf, off the coast of Saudi Arabia, Qatar and the United Arab Emirates (UAE. While the projected patterns provided useful indicators of potential climate change impacts on the region's diversity, the magnitude of changes in habitat suitability are more uncertain. Fisheries-specific results suggested reduced future catch potential for several countries on the western side of the Gulf, with projections differing only slightly among models. Qatar and the UAE were particularly affected, with more than a 26% drop in future fish catch potential. Integrating changes in catch potential with socio-economic indicators suggested the fisheries of Bahrain and Iran may be most vulnerable to climate change. We discuss limitations of the indicators and the methods used, as well as the implications of our overall findings for conservation and fisheries management policies in the region.

Climate change impacts on marine biodiversity, fisheries and society in the Arabian Gulf

Science.gov (United States)

Lam, Vicky W. Y.; Reygondeau, Gabriel; Teh, Lydia C. L.; Al-Abdulrazzak, Dalal; Khalfallah, Myriam; Pauly, Daniel; Palomares, Maria L. Deng; Zeller, Dirk; Cheung, William W. L.

2018-01-01

Climate change–reflected in significant environmental changes such as warming, sea level rise, shifts in salinity, oxygen and other ocean conditions–is expected to impact marine organisms and associated fisheries. This study provides an assessment of the potential impacts on, and the vulnerability of, marine biodiversity and fisheries catches in the Arabian Gulf under climate change. To this end, using three separate niche modelling approaches under a ‘business-as-usual’ climate change scenario, we projected the future habitat suitability of the Arabian Gulf (also known as the Persian Gulf) for 55 expert-identified priority species, including charismatic and non-fish species. Second, we conducted a vulnerability assessment of national economies to climate change impacts on fisheries. The modelling outputs suggested a high rate of local extinction (up to 35% of initial species richness) by 2090 relative to 2010. Spatially, projected local extinctions are highest in the southwestern part of the Gulf, off the coast of Saudi Arabia, Qatar and the United Arab Emirates (UAE). While the projected patterns provided useful indicators of potential climate change impacts on the region’s diversity, the magnitude of changes in habitat suitability are more uncertain. Fisheries-specific results suggested reduced future catch potential for several countries on the western side of the Gulf, with projections differing only slightly among models. Qatar and the UAE were particularly affected, with more than a 26% drop in future fish catch potential. Integrating changes in catch potential with socio-economic indicators suggested the fisheries of Bahrain and Iran may be most vulnerable to climate change. We discuss limitations of the indicators and the methods used, as well as the implications of our overall findings for conservation and fisheries management policies in the region. PMID:29718919

Climate change impacts on marine biodiversity, fisheries and society in the Arabian Gulf.

Science.gov (United States)

Wabnitz, Colette C C; Lam, Vicky W Y; Reygondeau, Gabriel; Teh, Lydia C L; Al-Abdulrazzak, Dalal; Khalfallah, Myriam; Pauly, Daniel; Palomares, Maria L Deng; Zeller, Dirk; Cheung, William W L

2018-01-01

Climate change-reflected in significant environmental changes such as warming, sea level rise, shifts in salinity, oxygen and other ocean conditions-is expected to impact marine organisms and associated fisheries. This study provides an assessment of the potential impacts on, and the vulnerability of, marine biodiversity and fisheries catches in the Arabian Gulf under climate change. To this end, using three separate niche modelling approaches under a 'business-as-usual' climate change scenario, we projected the future habitat suitability of the Arabian Gulf (also known as the Persian Gulf) for 55 expert-identified priority species, including charismatic and non-fish species. Second, we conducted a vulnerability assessment of national economies to climate change impacts on fisheries. The modelling outputs suggested a high rate of local extinction (up to 35% of initial species richness) by 2090 relative to 2010. Spatially, projected local extinctions are highest in the southwestern part of the Gulf, off the coast of Saudi Arabia, Qatar and the United Arab Emirates (UAE). While the projected patterns provided useful indicators of potential climate change impacts on the region's diversity, the magnitude of changes in habitat suitability are more uncertain. Fisheries-specific results suggested reduced future catch potential for several countries on the western side of the Gulf, with projections differing only slightly among models. Qatar and the UAE were particularly affected, with more than a 26% drop in future fish catch potential. Integrating changes in catch potential with socio-economic indicators suggested the fisheries of Bahrain and Iran may be most vulnerable to climate change. We discuss limitations of the indicators and the methods used, as well as the implications of our overall findings for conservation and fisheries management policies in the region.

Bats, Blood-Feeders and Biodiversity

DEFF Research Database (Denmark)

Bohmann, Kristine

DNA metabarcoding of environmental samples has rapidly become a valuable tool for ecological studies such as biodiversity and diet studies. To reveal the diversity in environmental samples such as soil, water, and faeces, this approach principally employs PCR amplification of environmental DNA...... minimising the occurrence of errors. Centered around metabarcoding dietary studies of bat droppings and leech gut contents, this continuous exploration and refinement is reflected in both the work and structure of this thesis. After a thesis introduction and two chapters on environmental DNA and biodiversity...

A Proposal Towards a Dutch Caribbean Marine Mammal Sanctuary

NARCIS (Netherlands)

Debrot, A.O.; Witte, R.H.; Scheidat, M.; Lucke, K.

2011-01-01

Based on the goals set forth in the Dutch Biodiversity Policy Programme, The Netherlands has a traditionally strong commitment to protect biodiversity and marine mammals both internationally and in its own national and Kingdom waters. Last year the responsible ministry, namely the Netherlands

Marine biodiversity of Bahía Culebra, Guanacaste, Costa Rica: published records

Directory of Open Access Journals (Sweden)

Jorge Cortés

2012-04-01

Full Text Available A survey of the published records of marine organisms of Bahía Culebra, an enclosed embayment on the north Pacific coast of Costa Rica, is analyzed resulting in a list of 577 species representing 22 phyla. The most diverse groups documented were crustaceans, cnidarians and mollusks in order of species number. The first published record of any marine organism from the area, a polychaete, occurred in 1922, with a peak of published records of species between 1940 and 1949 and, more recently, from 2000 to the present. Several additional taxa are known from the region but there are no published records of their occurrence. This is especially evident for such groups as the free living flatworms and black corals. Additionally, several habitats, including soft bottom sediments, have not been sampled. Because of the paucity of knowledge on the biodiversity of Bahia Culebra, much more research is needed in order to evaluate and understand the effect of climate change and increasing anthropogenic activities.Bahía Culebra es una bahía semicerrada en el Pacífico norte de Costa Rica. Se recopilaron y analizaron publicaciones en que se mencionan especies marinas de la Bahía. Un total de 577 especies en 22 filos han sido registradas, la mayoría crustaceos, cnidarios y moluscos. El primer informe de una especie marina de Bahía Culebra fue en 1922, un poliqueto. Entre 1940 y 1949 hay un pico de publicaciones con especies de la Bahía, al igual que del 2000 al presente. Se han observado algunos grupos de animales de los cuales no hay publicaciones, por ejemplo corales negros y gusanos planos de vida libre. Igualmente, tampoco hay publicaciones sobre los organismos del bentos blando. Más investigación en Bahía Culebra como también continuar y ampliar el monitoreo de ecosistemas y organismos marinos, es necesario para poder evaluar los impactos por la actividad humana y los naturales, incluyendo el cambio climático.

Seventy-one important questions for the conservation of marine biodiversity.

Science.gov (United States)

Parsons, E C M; Favaro, Brett; Aguirre, A Alonso; Bauer, Amy L; Blight, Louise K; Cigliano, John A; Coleman, Melinda A; Côté, Isabelle M; Draheim, Megan; Fletcher, Stephen; Foley, Melissa M; Jefferson, Rebecca; Jones, Miranda C; Kelaher, Brendan P; Lundquist, Carolyn J; McCarthy, Julie-Beth; Nelson, Anne; Patterson, Katheryn; Walsh, Leslie; Wright, Andrew J; Sutherland, William J

2014-10-01

The ocean provides food, economic activity, and cultural value for a large proportion of humanity. Our knowledge of marine ecosystems lags behind that of terrestrial ecosystems, limiting effective protection of marine resources. We describe the outcome of 2 workshops in 2011 and 2012 to establish a list of important questions, which, if answered, would substantially improve our ability to conserve and manage the world's marine resources. Participants included individuals from academia, government, and nongovernment organizations with broad experience across disciplines, marine ecosystems, and countries that vary in levels of development. Contributors from the fields of science, conservation, industry, and government submitted questions to our workshops, which we distilled into a list of priority research questions. Through this process, we identified 71 key questions. We grouped these into 8 subject categories, each pertaining to a broad component of marine conservation: fisheries, climate change, other anthropogenic threats, ecosystems, marine citizenship, policy, societal and cultural considerations, and scientific enterprise. Our questions address many issues that are specific to marine conservation, and will serve as a road map to funders and researchers to develop programs that can greatly benefit marine conservation. © 2014 The Authors. Conservation Biology published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

Biodiversity of bacterial ecosystems in traditional Egyptian Domiati cheese.

Science.gov (United States)

El-Baradei, Gaber; Delacroix-Buchet, Agnès; Ogier, Jean-Claude

2007-02-01

Bacterial biodiversity occurring in traditional Egyptian soft Domiati cheese was studied by PCR-temporal temperature gel electrophoresis (TTGE) and PCR-denaturing gradient gel electrophoresis (DGGE). Bands were identified using a reference species database (J.-C. Ogier et al., Appl. Environ. Microbiol. 70:5628-5643, 2004); de novo bands having nonidentified migration patterns were identified by DNA sequencing. Results reveal a novel bacterial profile and extensive bacterial biodiversity in Domiati cheeses, as reflected by the numerous bands present in TTGE and DGGE patterns. The dominant lactic acid bacteria (LAB) identified were as follows: Leuconostoc mesenteroides, Lactococcus garvieae, Aerococcus viridans, Lactobacillus versmoldensis, Pediococcus inopinatus, and Lactococcus lactis. Frequent non-LAB species included numerous coagulase-negative staphylococci, Vibrio spp., Kocuria rhizophila, Kocuria kristinae, Kocuria halotolerans, Arthrobacter spp./Brachybacterium tyrofermentans. This is the first time that the majority of these species has been identified in Domiati cheese. Nearly all the dominant and frequent bacterial species are salt tolerant, and several correspond to known marine bacteria. As Domiati cheese contains 5.4 to 9.5% NaCl, we suggest that these bacteria are likely to have an important role in the ripening process. This first systematic study of the microbial composition of Domiati cheeses reveals great biodiversity and evokes a role for marine bacteria in determining cheese type.

Biodiversity of Bacterial Ecosystems in Traditional Egyptian Domiati Cheese▿

Science.gov (United States)

El-Baradei, Gaber; Delacroix-Buchet, Agnès; Ogier, Jean-Claude

2007-01-01

Bacterial biodiversity occurring in traditional Egyptian soft Domiati cheese was studied by PCR-temporal temperature gel electrophoresis (TTGE) and PCR-denaturing gradient gel electrophoresis (DGGE). Bands were identified using a reference species database (J.-C. Ogier et al., Appl. Environ. Microbiol. 70:5628-5643, 2004); de novo bands having nonidentified migration patterns were identified by DNA sequencing. Results reveal a novel bacterial profile and extensive bacterial biodiversity in Domiati cheeses, as reflected by the numerous bands present in TTGE and DGGE patterns. The dominant lactic acid bacteria (LAB) identified were as follows: Leuconostoc mesenteroides, Lactococcus garvieae, Aerococcus viridans, Lactobacillus versmoldensis, Pediococcus inopinatus, and Lactococcus lactis. Frequent non-LAB species included numerous coagulase-negative staphylococci, Vibrio spp., Kocuria rhizophila, Kocuria kristinae, Kocuria halotolerans, Arthrobacter spp./Brachybacterium tyrofermentans. This is the first time that the majority of these species has been identified in Domiati cheese. Nearly all the dominant and frequent bacterial species are salt tolerant, and several correspond to known marine bacteria. As Domiati cheese contains 5.4 to 9.5% NaCl, we suggest that these bacteria are likely to have an important role in the ripening process. This first systematic study of the microbial composition of Domiati cheeses reveals great biodiversity and evokes a role for marine bacteria in determining cheese type. PMID:17189434

Biodiversity of shallow subtidal, under-rock invertebrates in Europe's first marine reserve: Effects of physical factors and scientific sampling

Science.gov (United States)

Trowbridge, Cynthia D.; Kachmarik, Katy; Plowman, Caitlin Q.; Little, Colin; Stirling, Penny; McAllen, Rob

2017-03-01

At Lough Hyne Marine Reserve in SW Ireland, shallow subtidal, under-rock biodiversity was investigated to assess (i) any deleterious effects of scientific sampling and (ii) quantitative baseline community patterns. Comparisons were made between 10 sites with annual rock-turning disturbance and 10 with multi-decadal (historical) disturbance. At each site, shallow subtidal rocks (N = 1289 total) were lifted, organisms recorded, and rocks replaced in their original position. Biodiversity indices were calculated to evaluate how diversity varied with location within the lough, frequency of sampling disturbance, degree of hypoxia/anoxia, dissolved oxygen (DO) concentration, and number of rocks turned. The richness of solitary invertebrates surveyed in situ averaged 21 taxa per site with significantly more in the South Basin (near the lough's connection to the ocean) than in the North Basin. The Shannon-Wiener Index did not differ significantly with variables investigated. However, evenness was higher at annually disturbed sites than at historical ones where anemones with algal symbionts often dominated. Several sites were hypoxic to anoxic under the shallow subtidal rocks. Cup corals were most abundant in the South Basin; DO was a crucial explanatory variable of these sensitive species. Solitary ascidians were most abundant at South-Basin annual sites with DO levels being a highly significant explanatory variable.

Crowdfunding biodiversity conservation.

Science.gov (United States)

Gallo-Cajiao, E; Archibald, C; Friedman, R; Steven, R; Fuller, R A; Game, E T; Morrison, T H; Ritchie, E G

2018-05-26

Raising funds is critical for conserving biodiversity and hence so too is scrutinizing emerging financial mechanisms that might help achieve this goal. In this context, anecdotal evidence indicates crowdfunding is being used to support a variety of activities needed for biodiversity conservation, yet its magnitude and allocation remain largely unknown. We conducted a global analysis to help address this knowledge gap, based on empirical data from conservation-focused projects extracted from crowdfunding platforms. For each project, we determined the funds raised, date, country of implementation, proponent characteristics, activity type, biodiversity realm, and target taxa. We identified 72 relevant platforms and 577 conservation-focused projects that have raised US$4 790 634 since 2009. Whilst proponents were based in 38 countries, projects were delivered across 80 countries, indicating a potential mechanism of resource mobilization. Proponents were from non-governmental organizations (35%), universities (30%), or were freelancers (26%). Most projects were for research (40%), persuasion (31%), and on-ground actions (21%). Projects have focused primarily on species (57.7%) and terrestrial ecosystems (20.3%), and less on marine (8.8%) and freshwater ecosystems (3.6%). Projects have focused on 208 species, including a disproportionate number of threatened bird and mammal species. Crowdfunding for biodiversity conservation has now become a global phenomenon and presents signals for potential expansion, despite possible pitfalls. Opportunities arise from its spatial amplifying effect, steady increase over time, inclusion of Cinderella species, adoption by multiple actors, and funding of a range of activities beyond research. Our study paves the way for further research on key questions, such as campaign success rates, effectiveness, and drivers of adoption. Even though the capital input of crowdfunding so far has been modest compared to other conservation finance

Temperature impacts on deep-sea biodiversity.

Science.gov (United States)

Yasuhara, Moriaki; Danovaro, Roberto

2016-05-01

Temperature is considered to be a fundamental factor controlling biodiversity in marine ecosystems, but precisely what role temperature plays in modulating diversity is still not clear. The deep ocean, lacking light and in situ photosynthetic primary production, is an ideal model system to test the effects of temperature changes on biodiversity. Here we synthesize current knowledge on temperature-diversity relationships in the deep sea. Our results from both present and past deep-sea assemblages suggest that, when a wide range of deep-sea bottom-water temperatures is considered, a unimodal relationship exists between temperature and diversity (that may be right skewed). It is possible that temperature is important only when at relatively high and low levels but does not play a major role in the intermediate temperature range. Possible mechanisms explaining the temperature-biodiversity relationship include the physiological-tolerance hypothesis, the metabolic hypothesis, island biogeography theory, or some combination of these. The possible unimodal relationship discussed here may allow us to identify tipping points at which on-going global change and deep-water warming may increase or decrease deep-sea biodiversity. Predicted changes in deep-sea temperatures due to human-induced climate change may have more adverse consequences than expected considering the sensitivity of deep-sea ecosystems to temperature changes. © 2014 Cambridge Philosophical Society.

Synthetic polymers in the marine environment: a rapidly increasing, long-term threat.

Science.gov (United States)

Moore, Charles James

2008-10-01

. Ingestion of degraded plastic pellets and fragments raises toxicity concerns, since plastics are known to adsorb hydrophobic pollutants. The potential bioavailability of compounds added to plastics at the time of manufacture, as well as those adsorbed from the environment are complex issues that merit more widespread investigation. The physiological effects of any bioavailable compounds desorbed from plastics by marine biota are being directly investigated, since it was found 20 years ago that the mass of ingested plastic in Great Shearwaters was positively correlated with PCBs in their fat and eggs. Colonization of plastic marine debris by sessile organisms provides a vector for transport of alien species in the ocean environment and may threaten marine biodiversity. There is also potential danger to marine ecosystems from the accumulation of plastic debris on the sea floor. The accumulation of such debris can inhibit gas exchange between the overlying waters and the pore waters of the sediments, and disrupt or smother inhabitants of the benthos. The extent of this problem and its effects have recently begun to be investigated. A little more than half of all thermoplastics will sink in seawater.

Effects of household dynamics on resource consumption and biodiversity.

Science.gov (United States)

Liu, Jianguo; Daily, Gretchen C; Ehrlich, Paul R; Luck, Gary W

2003-01-30

Human population size and growth rate are often considered important drivers of biodiversity loss, whereas household dynamics are usually neglected. Aggregate demographic statistics may mask substantial changes in the size and number of households, and their effects on biodiversity. Household dynamics influence per capita consumption and thus biodiversity through, for example, consumption of wood for fuel, habitat alteration for home building and associated activities, and greenhouse gas emissions. Here we report that growth in household numbers globally, and particularly in countries with biodiversity hotspots (areas rich in endemic species and threatened by human activities), was more rapid than aggregate population growth between 1985 and 2000. Even when population size declined, the number of households increased substantially. Had the average household size (that is, the number of occupants) remained static, there would have been 155 million fewer households in hotspot countries in 2000. Reduction in average household size alone will add a projected 233 million additional households to hotspot countries during the period 2000-15. Rapid increase in household numbers, often manifested as urban sprawl, and resultant higher per capita resource consumption in smaller households pose serious challenges to biodiversity conservation.

Biodiversity in the Anthropocene: prospects and policy

Science.gov (United States)

Mace, Georgina M.; Mouillot, David; Vause, James; Walpole, Matt

2016-01-01

Meeting the ever-increasing needs of the Earth’s human population without excessively reducing biological diversity is one of the greatest challenges facing humanity, suggesting that new approaches to biodiversity conservation are required. One idea rapidly gaining momentum—as well as opposition—is to incorporate the values of biodiversity into decision-making using economic methods. Here, we develop several lines of argument for how biodiversity might be valued, building on recent developments in natural science, economics and science-policy processes. Then we provide a synoptic guide to the papers in this special feature, summarizing recent research advances relevant to biodiversity valuation and management. Current evidence suggests that more biodiverse systems have greater stability and resilience, and that by maximizing key components of biodiversity we maximize an ecosystem’s long-term value. Moreover, many services and values arising from biodiversity are interdependent, and often poorly captured by standard economic models. We conclude that economic valuation approaches to biodiversity conservation should (i) account for interdependency and (ii) complement rather than replace traditional approaches. To identify possible solutions, we present a framework for understanding the foundational role of hard-to-quantify ‘biodiversity services’ in sustaining the value of ecosystems to humanity, and then use this framework to highlight new directions for pure and applied research. In most cases, clarifying the links between biodiversity and ecosystem services, and developing effective policy and practice for managing biodiversity, will require a genuinely interdisciplinary approach. PMID:27928040

Biodiversity in the Anthropocene: prospects and policy.

Science.gov (United States)

Seddon, Nathalie; Mace, Georgina M; Naeem, Shahid; Tobias, Joseph A; Pigot, Alex L; Cavanagh, Rachel; Mouillot, David; Vause, James; Walpole, Matt

2016-12-14

Meeting the ever-increasing needs of the Earth's human population without excessively reducing biological diversity is one of the greatest challenges facing humanity, suggesting that new approaches to biodiversity conservation are required. One idea rapidly gaining momentum-as well as opposition-is to incorporate the values of biodiversity into decision-making using economic methods. Here, we develop several lines of argument for how biodiversity might be valued, building on recent developments in natural science, economics and science-policy processes. Then we provide a synoptic guide to the papers in this special feature, summarizing recent research advances relevant to biodiversity valuation and management. Current evidence suggests that more biodiverse systems have greater stability and resilience, and that by maximizing key components of biodiversity we maximize an ecosystem's long-term value. Moreover, many services and values arising from biodiversity are interdependent, and often poorly captured by standard economic models. We conclude that economic valuation approaches to biodiversity conservation should (i) account for interdependency and (ii) complement rather than replace traditional approaches. To identify possible solutions, we present a framework for understanding the foundational role of hard-to-quantify 'biodiversity services' in sustaining the value of ecosystems to humanity, and then use this framework to highlight new directions for pure and applied research. In most cases, clarifying the links between biodiversity and ecosystem services, and developing effective policy and practice for managing biodiversity, will require a genuinely interdisciplinary approach. © 2016 The Author(s).

Protecting biodiversity in coastal environments: Introduction and overview

International Nuclear Information System (INIS)

Beatley, T.

1991-01-01

Much less attention has been paid in recent years to the threats to coastal and marine biodiversity, compared to biodiversity in more terrestrial habitats. The tremendous biodiversity at risk and the severity and magnitude of the pressures being exerted on coastal habitats suggest the need for much greater attention to be focused here by both the policy and scientific communities. The threats to coastal biodiversity are numerous and include air and water pollution; over exploitation and harvesting; the introduction of exotic species; the dramatic loss of habitat due to urbanization, agricultural expansion, and other land use changes; and the potentially serious effects of global climate change. These threats suggest the need for swift action at a number of jurisdictional and governmental levels. Major components of such an effort are identified and described. These include the need for comprehensive management approaches, the expansion of parks and protected areas, restoration and mitigation, multinational and international initiatives, and efforts to promote sustainable development and sustainable lifestyles. Suggestions for future research are also provided

The crowded sea: incorporating multiple marine activities in conservation plans can significantly alter spatial priorities.

Directory of Open Access Journals (Sweden)

Tessa Mazor

Full Text Available Successful implementation of marine conservation plans is largely inhibited by inadequate consideration of the broader social and economic context within which conservation operates. Marine waters and their biodiversity are shared by a host of stakeholders, such as commercial fishers, recreational users and offshore developers. Hence, to improve implementation success of conservation plans, we must incorporate other marine activities while explicitly examining trade-offs that may be required. In this study, we test how the inclusion of multiple marine activities can shape conservation plans. We used the entire Mediterranean territorial waters of Israel as a case study to compare four planning scenarios with increasing levels of complexity, where additional zones, threats and activities were added (e.g., commercial fisheries, hydrocarbon exploration interests, aquaculture, and shipping lanes. We applied the marine zoning decision support tool Marxan to each planning scenario and tested a the ability of each scenario to reach biodiversity targets, b the change in opportunity cost and c the alteration of spatial conservation priorities. We found that by including increasing numbers of marine activities and zones in the planning process, greater compromises are required to reach conservation objectives. Complex plans with more activities incurred greater opportunity cost and did not reach biodiversity targets as easily as simplified plans with less marine activities. We discovered that including hydrocarbon data in the planning process significantly alters spatial priorities. For the territorial waters of Israel we found that in order to protect at least 10% of the range of 166 marine biodiversity features there would be a loss of ∼15% of annual commercial fishery revenue and ∼5% of prospective hydrocarbon revenue. This case study follows an illustrated framework for adopting a transparent systematic process to balance biodiversity goals and

Bioinformatics: Cheap and robust method to explore biomaterial from Indonesia biodiversity

Science.gov (United States)

Widodo

2015-02-01

Indonesia has a huge amount of biodiversity, which may contain many biomaterials for pharmaceutical application. These resources potency should be explored to discover new drugs for human wealth. However, the bioactive screening using conventional methods is very expensive and time-consuming. Therefore, we developed a methodology for screening the potential of natural resources based on bioinformatics. The method is developed based on the fact that organisms in the same taxon will have similar genes, metabolism and secondary metabolites product. Then we employ bioinformatics to explore the potency of biomaterial from Indonesia biodiversity by comparing species with the well-known taxon containing the active compound through published paper or chemical database. Then we analyze drug-likeness, bioactivity and the target proteins of the active compound based on their molecular structure. The target protein was examined their interaction with other proteins in the cell to determine action mechanism of the active compounds in the cellular level, as well as to predict its side effects and toxicity. By using this method, we succeeded to screen anti-cancer, immunomodulators and anti-inflammation from Indonesia biodiversity. For example, we found anticancer from marine invertebrate by employing the method. The anti-cancer was explore based on the isolated compounds of marine invertebrate from published article and database, and then identified the protein target, followed by molecular pathway analysis. The data suggested that the active compound of the invertebrate able to kill cancer cell. Further, we collect and extract the active compound from the invertebrate, and then examined the activity on cancer cell (MCF7). The MTT result showed that the methanol extract of marine invertebrate was highly potent in killing MCF7 cells. Therefore, we concluded that bioinformatics is cheap and robust way to explore bioactive from Indonesia biodiversity for source of drug and another

The Challenge of Managing Marine Biodiversity: A Practical Toolkit for a Cartographic, Territorial Approach

Directory of Open Access Journals (Sweden)

Carla Morri

2012-11-01

Full Text Available An approach to the management of marine biodiversity was developed based on two levels of environmental diagnostics: (1 the characterization (to identify types, and (2 the evaluation (to define status and values. Both levels involve the production of maps, namely: (i morphobathymetry and sedimentology; (ii habitats; (iii natural emergencies; (iv degradation and risk; (v weighted vulnerability; (vi environmental quality; and, (vii susceptibility to use. A general methodological aspect that must be stated first is the need of dividing the mapped area in territorial units corresponding to submultiples of the UTM grid and having different sizes according to the scale adopted. Territorial units (grid cells are assigned to one of five classes of evaluation, ranging from high necessity of conservation or protection to non-problematic, unimportant or already compromised (according to the specific map situations. Depending on the scale, these maps are suited for territorial planning (small scales, allowing for a synoptic view or for administration and decision making (large scales, providing detail on local situations and problems. Mapping should be periodically repeated (diachronic cartography to assure an efficient tool for integrated coastal zone management.

Drivers of Pontocaspian Biodiversity Rise and Demise

Science.gov (United States)

Wesselingh, Frank; Flecker, Rachel; Wilke, Thomas; Leroy, Suzanne; Krijgsman, Wout; Stoica, Marius

2015-04-01

In the past two million years, the region of the Black Sea Basin, Caspian Basin and adjacent Anatolia and the Balkans were the stage of the evolution of a unique brackish water fauna, the so-called Pontocaspian fauna. The fauna is the result of assembly of genera with a Paratethyan origin and Anatolian origins during the Early Pleistocene. The rapid diversification of the Pontocaspian fauna is the result of the very dynamic nature of the lakes (the Caspian Sea is technically a lake) and seas in the region in the past two million years. In most times the various lake basins were isolated (like today), but in other episodes connections existed. Regional and global climate as well as the regional tectonic regimes were main drivers of lake basin evolution. Over the past 80 years a major biodiversity crisis is hitting the Pontocaspian faunas due to environmental degradation, pollution and invasive species. In the new EU-ETN PRIDE (Drivers of Pontocaspian Biodiversity Rise and Demise)we will be documenting the geological context of past diversifications and turnover events. We present examples of rapid turnover (biodiversity crises) in the Quaternary, assess driving forces and draw implications for the nature of the current human-mediated biodiversity crisis in the region.

Present Status of Intertidal Biodiversity in and around Mumbai (West Coast of India

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Balasaheb Kulkarni

2017-03-01

Full Text Available During the present investigation, Girgaon, Marine Drive, Haji Ali and Gorai Creek in Mumbai were selected for biodiversity assessment following a protocol for natural geography in shore areas. Fifty nine macrobenthic molluscs, arthropods, coelenterates and echinoderms at these sites were recorded. The maximum density of gastropods and clams was observed at Marine Drive shore. At Gorai Creek, there were plentiful Telescopium telescopium, Potamidus cingulatis, mudskipper and fiddler crabs. Studies shows that the biodiversity status of the selected sites varies with respect to location, type of substratum and season. Pollution was observed to have a noticeable effect on clams at Girgaon coast, where many Paphia textile shells were observed to be filled with mud and coated with black colour.

New Mediterranean Biodiversity Records (July 2016)

OpenAIRE

Dailianis, T.; Akyol, O.; Babali, N.; Bariche, M.; Crocetta, F.; Gerovasileiou, V.; Chanem, R.; Gökoğlu, M.; Hasiotis, T.; Izquierdo Muñoz, Andrés; Julian, D.; Katsanevakis, S.; Lipez, L.; Mancini, E.; Mytilineou, Ch.

2016-01-01

This contribution forms part of a series of collective articles published regularly in Mediterranean Marine Science that report on new biodiversity records from the Mediterranean basin. The current article presents 51 geographically distinct records for 21 taxa belonging to 6 Phyla, extending from the western Mediterranean to the Levantine. The new records, per country, are as follows: Spain: the cryptogenic calcareous sponge Paraleucilla magna is reported from a new location in the A...

Marine biodiversity of an Eastern Tropical Pacific oceanic island, Isla del Coco, Costa Rica

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Jorge Cortés

2012-11-01

Full Text Available Isla del Coco (also known as Cocos Island is an oceanic island in the Eastern Tropical Pacific; it is part of the largest national park of Costa Rica and a UNESCO World Heritage Site. The island has been visited since the 16th Century due to its abundance of freshwater and wood. Marine biodiversity studies of the island started in the late 19th Century, with an intense period of research in the 1930’s, and again from the mid 1990’s to the present. The information is scattered and, in some cases, in old publications that are difficult to access. Here I have compiled published records of the marine organisms of the island. At least 1688 species are recorded, with the gastropods (383 species, bony fishes (354 spp. and crustaceans (at least 263 spp. being the most species-rich groups; 45 species are endemic to Isla del Coco National Park (2.7% of the total. The number of species per kilometer of coastline and by square kilometer of seabed shallower than 200m deep are the highest recorded in the Eastern Tropical Pacific. Although the marine biodiversity of Isla del Coco is relatively well known, there are regions that need more exploration, for example, the south side, the pelagic environments, and deeper waters. Also, several groups of organisms, such as the flatworms, nematodes, nemerteans, and gelatinous zooplankton, have been observed around the Island but have been poorly studied or not at all.La Isla del Coco es una isla oceánica en el Pacífico Tropical Oriental; es parte del Parque Nacional más grande de Costa Rica y es un sitio de Patrimonio Mundial. La isla ha sido visitada desde el Siglo XVI por su abundancia de agua dulce y árboles. Estudios de biodiversidad marina de la isla empezaron a finales del Siglo XIX, con un intenso período de investigación en la década de 1930, y de nuevo desde mediados de la década de 1990 al presente. La información sobre organismos marinos se encuentra dispersa y en algunos casos en publicaciones

Evaluating the effectiveness of protected areas for maintaining biodiversity, securing habitats, and reducing threats

DEFF Research Database (Denmark)

Geldmann, Jonas

of this thesis has been to evaluate the performance and effectiveness of protected area in securing biodiversity, by evaluating their ability to either improve conservation responses, the state of biodiversity, or alternatively to reduce the human pressures responsible for the loss of biodiversity. The scope......Protected areas are amongst the most important conservation responses to halt the loss of biodiversity and cover more than 12.7% of the terrestrial surface of earth. Likewise, protected areas are an important political instrument and a key component of the Convention for Biological Diversity (CBD......); seeking to protect at least 17% of the terrestrial surface and 10% of the coastal and marine areas by 2020. Protected areas are expected to deliver on many different objectives covering biodiversity, climate change mitigation, local livelihood, and cultural & esthetic values. Within each...

Children in Nature: Sensory Engagement and the Experience of Biodiversity

Science.gov (United States)

Beery, Thomas; Jørgensen, Kari Anne

2018-01-01

Given concerns for a severely diminished childhood experience of nature, coupled with alarm for a rapidly diminishing global biodiversity, this article considers the potential for childhood nature experience to be an important part of biodiversity understanding. Findings from two studies are integrated and presented as windows into childhood…

Marine Protected Dramas: The Flaws of the Brazilian National System of Marine Protected Areas

Science.gov (United States)

Gerhardinger, Leopoldo C.; Godoy, Eduardo A. S.; Jones, Peter J. S.; Sales, Gilberto; Ferreira, Beatrice P.

2011-04-01

This article discusses the current problems and issues associated with the implementation of a National System of Marine Protected Areas in Brazil. MPA managers and higher governmental level authorities were interviewed about their perceptions of the implementation of a national MPA strategy and the recent changes in the institutional arrangement of government marine conservation agencies. Interviewees' narratives were generally pessimistic and the National System was perceived as weak, with few recognizable marine conservation outcomes on the ground. The following major flaws were identified: poor inter-institutional coordination of coastal and ocean governance; institutional crisis faced by the national government marine conservation agency; poor management within individual MPAs; problems with regional networks of marine protected areas; an overly bureaucratic management and administrative system; financial shortages creating structural problems and a disconnect between MPA policy and its delivery. Furthermore, a lack of professional motivation and a pessimistic atmosphere was encountered during many interviews, a malaise which we believe affects how the entire system is able to respond to crises. Our findings highlight the need for a better understanding of the role of `leadership' in the performance of socio-ecological systems (such as MPA networks), more effective official evaluation mechanisms, more localized audits of (and reforms if necessary to) Brazil's federal biodiversity conservation agency (ICMBio), and the need for political measures to promote state leadership and support. Continuing to focus on the designation of more MPAs whilst not fully addressing these issues will achieve little beyond fulfilling, on paper, Brazil's international marine biodiversity commitments.

New Mediterranean Biodiversity Records (October, 2014

Directory of Open Access Journals (Sweden)

S. KATSANEVAKIS

2014-11-01

Full Text Available The Collective Article ‘New Mediterranean Biodiversity Records’ of the Mediterranean Marine Science journal offers the means to publish biodiversity records in the Mediterranean Sea. The current article is divided in two parts, for records of alien and native species respectively. The new records of alien species include: the red alga Asparagopsis taxiformis (Crete and Lakonicos Gulf (Greece; the red alga Grateloupia turuturu (along the Israeli Mediterranean shore; the mantis shrimp Clorida albolitura (Gulf of Antalya, Turkey; the mud crab Dyspanopeus sayi (Mar Piccolo of Taranto, Ionian Sea; the blue crab Callinectes sapidus (Chios Island, Greece; the isopod Paracerceis sculpta (northern Aegean Sea, Greece; the sea urchin Diadema setosum (Gökova Bay, Turkey; the molluscs Smaragdia souverbiana, Murex forskoehlii, Fusinus verrucosus, Circenita callipyga, and Aplysia dactylomela (Syria; the cephalaspidean mollusc Haminoea cyanomarginata (Baia di Puolo, Massa Lubrense, Campania, southern Italy; the topmouth gudgeon Pseudorasbora parva (Civitavecchia, Tyrrhenian Sea; the fangtooth moray Enchelycore anatine (Plemmirio marine reserve, Sicily; the silver-cheeked toadfish Lagocephalus sceleratus (Saros Bay, Turkey; and Ibiza channel, Spain; the Indo-Pacific ascidian Herdmania momusin Kastelorizo Island (Greece; and the foraminiferal Clavulina multicam erata (Saronikos Gulf, Greece. The record of L. sceleratus in Spain consists the deepest (350-400m depth record of the species in the Mediterranean Sea. The new records of native species include: first record of the ctenophore Cestum veneris in Turkish marine waters; the presence of Holothuria tubulosa and Holothuria polii in the Bay of Igoumenitsa (Greece; the first recorded sighting of the bull ray Pteromylaeus bovinus in Maltese waters; and a new record of the fish Lobotes surinamensis from Maliakos Gulf.

Coordinating for Arctic Conservation: Implementing Integrated Arctic Biodiversity Monitoring, Data Management and Reporting

Science.gov (United States)

Gill, M.; Svoboda, M.

2012-12-01

Arctic ecosystems and the biodiversity they support are experiencing growing pressure from various stressors (e.g. development, climate change, contaminants, etc.) while established research and monitoring programs remain largely uncoordinated, lacking the ability to effectively monitor, understand and report on biodiversity trends at the circumpolar scale. The maintenance of healthy arctic ecosystems is a global imperative as the Arctic plays a critical role in the Earth's physical, chemical and biological balance. A coordinated and comprehensive effort for monitoring arctic ecosystems is needed to facilitate effective and timely conservation and adaptation actions. The Arctic's size and complexity represents a significant challenge towards detecting and attributing important biodiversity trends. This demands a scaled, pan-arctic, ecosystem-based approach that not only identifies trends in biodiversity, but also identifies underlying causes. It is critical that this information be made available to generate effective strategies for adapting to changes now taking place in the Arctic—a process that ultimately depends on rigorous, integrated, and efficient monitoring programs that have the power to detect change within a "management" time frame. To meet these challenges and in response to the Arctic Climate Impact Assessment's recommendation to expand and enhance arctic biodiversity monitoring, the Conservation of Arctic Flora and Fauna (CAFF) Working Group of the Arctic Council launched the Circumpolar Biodiversity Monitoring Program (CBMP). The CBMP is led by Environment Canada on behalf of Canada and the Arctic Council. The CBMP is working with over 60 global partners to expand, integrate and enhance existing arctic biodiversity research and monitoring efforts to facilitate more rapid detection, communication and response to significant trends and pressures. Towards this end, the CBMP has established three Expert Monitoring Groups representing major Arctic

Marine Bacteria from Eastern Indonesia Waters and Their Potential Use in Biotechnology

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Yosmina H Tapilatu

2016-05-01

Full Text Available Indonesian vast marine waters, which constitute 81% of the country’s total area, have a great potential in terms of marine bacteria biodiversity. However, marine bacteria are still under-explored in Indonesia, especially in its eastern area. Known as one of the biodiversity hotspots worldwide, this area surely harbors various marine bacteria of particular interest. Despite the growing number of oceanic expeditions carried out in this area, only little attention has been attributed to marine bacteria. Limited literatures exist on the isolation of marine bacteria producing compounds with potential biotechnological applications from the aforementioned waters. There are two main causes of this problem, namely lack of infrastructures and limited competent human resources. In this paper, I will highlight the preliminary results of isolation and bioprospecting attempts on this group of bacteria during the last fifteen years. These results indicate that research activities on marine bacteria in this area need to be intensified, to uncover their potential applications in various biotechnological fields. Keywords: marine bacteria, eastern Indonesian waters, biotechnological application

Biodiversity analysis in the digital era

Science.gov (United States)

2016-01-01

This paper explores what the virtual biodiversity e-infrastructure will look like as it takes advantage of advances in ‘Big Data’ biodiversity informatics and e-research infrastructure, which allow integration of various taxon-level data types (genome, morphology, distribution and species interactions) within a phylogenetic and environmental framework. By overcoming the data scaling problem in ecology, this integrative framework will provide richer information and fast learning to enable a deeper understanding of biodiversity evolution and dynamics in a rapidly changing world. The Atlas of Living Australia is used as one example of the advantages of progressing towards this future. Living in this future will require the adoption of new ways of integrating scientific knowledge into societal decision making. This article is part of the themed issue ‘From DNA barcodes to biomes’. PMID:27481789

Marine protected areas increase resilience among coral reef communities.

Science.gov (United States)

Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M

2016-06-01

With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider ecosystem functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of coral reef communities to natural disturbances, including coral bleaching, coral diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier Reef, we show that within MPAs, (1) reef community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects. © 2016 John Wiley & Sons Ltd/CNRS.

Marine Fish Hybridization

KAUST Repository

He, Song

2017-04-01

Natural hybridization is reproduction (without artificial influence) between two or more species/populations which are distinguishable from each other by heritable characters. Natural hybridizations among marine fishes were highly underappreciated due to limited research effort; it seems that this phenomenon occurs more often than is commonly recognized. As hybridization plays an important role in biodiversity processes in the marine environment, detecting hybridization events and investigating hybridization is important to understand and protect biodiversity. The first chapter sets the framework for this disseration study. The Cohesion Species Concept was selected as the working definition of a species for this study as it can handle marine fish hybridization events. The concept does not require restrictive species boundaries. A general history and background of natural hybridization in marine fishes is reviewed during in chapter as well. Four marine fish hybridization cases were examed and documented in Chapters 2 to 5. In each case study, at least one diagnostic nuclear marker, screened from among ~14 candidate markers, was found to discriminate the putative hybridizing parent species. To further investigate genetic evidence to support the hybrid status for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations together, the potential reasons that triggered each hybridization events and the potential genetic/ecology effects could be discussed. In the last chapter, sequences from 82 pairs of hybridizing parents species (for which COI barcoding sequences were available either on GenBank or in our lab) were collected. By comparing the COI fragment p-distance between each hybridizing parent species, some general questions about marine fish hybridization were discussed: Is

Biodiversity hotspots: A shortcut for a more complicated concept

Directory of Open Access Journals (Sweden)

Christian Marchese

2015-01-01

Full Text Available In an era of human activities, global environmental changes, habitat loss and species extinction, conservation strategies are a crucial step toward minimizing biodiversity loss. For instance, oceans acidification and land use are intensifying in many places with negative and often irreversible consequences for biodiversity. Biodiversity hotspots, despite some criticism, have become a tool for setting conservation priorities and play an important role in decision-making for cost-effective strategies to preserve biodiversity in terrestrial and, to some extent, marine ecosystems. This area-based approach can be applied to any geographical scale and it is considered to be one of the best approaches for maintaining a large proportion of the world’s biological diversity. However, delineating hotspots includes quantitative criteria along with subjective considerations and the risk is to neglect areas, such as coldspots, with other types of conservation value. Nowadays, it is widely acknowledged that biodiversity is much more than just the number of species in a region and a conservation strategy cannot be based merely on the number of taxa present in an ecosystem. Therefore, the idea that strongly emerges is the need to reconsider conservation priorities and to go toward an interdisciplinary approach through the creation of science-policy partnerships.

Recreational SCUBA divers' willingness to pay for marine biodiversity in Barbados.

Science.gov (United States)

Schuhmann, Peter W; Casey, James F; Horrocks, Julia A; Oxenford, Hazel A

2013-05-30

The use of natural resources and the services they provide often do not have an explicit price and are therefore undervalued in decision-making, leading to environmental degradation. To 'monetize' the benefits from these services requires the use of non-market valuation techniques. Using a stated preference survey of recreational divers in Barbados conducted between 2007 and 2009, the economic value of marine biodiversity to recreational SCUBA divers in Barbados was estimated. In addition to a variety of demographic variables, divers were asked about their level of experience, expenditures related to travel and diving, and encounters with fish and sea turtles. Divers then completed a choice experiment, selecting between alternative dives with varying characteristics including price, crowding, fish diversity, encounters with sea turtles, and coral cover. Results indicate that divers in Barbados have a clear appreciation of reef quality variables. Willingness to pay for good coral cover, fish diversity and presence of sea turtles is significantly higher than prices paid for dives. In general, divers valued reef attributes similarly, although their appreciation of low density of divers at a site and high coral cover varied with prior diving experience. The results of this study demonstrate the economic value generated in Barbados by the recreational SCUBA diving industry and highlight the potential for substantial additional economic contributions with improvements to the quality of a variety of reef attributes. These results could inform management decisions regarding reef use and sea turtle conservation, and could aid in the development of informed 'win-win' policies aimed at maximizing returns from diving while reducing negative impacts often associated with tourism activities. Copyright © 2013 Elsevier Ltd. All rights reserved.

Advancing marine conservation in European and contiguous seas with the MarCons Action

Directory of Open Access Journals (Sweden)

Stelios Katsanevakis

2017-01-01

Full Text Available Cumulative human impacts have led to the degradation of marine ecosystems and the decline of biodiversity in the European and contiguous seas. Effective conservation measures are urgently needed to reverse these trends. Conservation must entail societal choices, underpinned by human values and worldviews that differ between the countries bordering these seas. Social, economic and political heterogeneity adds to the challenge of balancing conservation with sustainable use of the seas. Comprehensive macro-regional coordination is needed to ensure effective conservation of marine ecosystems and biodiversity of this region. Under the European Union Horizon 2020 framework programme, the MarCons COST action aims to promote collaborative research to support marine management, conservation planning and policy development. This will be achieved by developing novel methods and tools to close knowledge gaps and advance marine conservation science. This action will provide support for the development of macro-regional and national policies through six key actions: to develop tools to analyse cumulative human impacts; to identify critical scientific and technical gaps in conservation efforts; to improve the resilience of the marine environment to global change and biological invasions; to develop frameworks for integrated conservation planning across terrestrial, freshwater, and marine environments; to coordinate marine conservation policy across national boundaries; and to identify effective governance approaches for marine protected area management. Achieving the objectives of these actions will facilitate the integration of marine conservation policy into macro-regional maritime spatial planning agendas for the European and contiguous seas, thereby offsetting the loss of biodiversity and ecosystem services in this region.

The Middle Eastern Biodiversity Network: Generating and sharing knowledge for ecosystem management and conservation

Directory of Open Access Journals (Sweden)

Friedhelm Krupp

2009-12-01

Full Text Available Despite prevailing arid conditions, the diversity of terrestrial and freshwater biota in the Middle East is amazingly high and marine biodiversity is the second highest on Earth. Throughout the region, threats to the environment are moderate to severe. Despite the outstanding economic and ecological importance of biological diversity, the capacity in biodiversity-related research and education is inadequate in most parts of the Middle East. The ";;Middle Eastern Biodiversity Network";; (MEBN, founded in 2006 by six universities and research institutes in Iran, Jordan, Germany, Lebanon and Yemen was designed to fill this gap. An integrated approach is taken to upgrade biodiversity research and education to improve regional ecosystem conservation and management capacities. A wide range of activities are carried out in the framework of the Network, including capacity building in biological collection management and professional natural history curatorship, developing university curricula in biodiversity, conducting scientific research, organising workshops and conferences on Middle Eastern biodiversity, and translating the results of biodiversity research into conservation and sustainable development.

Engaging the broader community in biodiversity research: the concept of the COMBER pilot project for divers in ViBRANT

Directory of Open Access Journals (Sweden)

Christos Arvanitidis

2011-11-01

Full Text Available This paper discusses the design and implementation of a citizen science pilot project, COMBER (Citizens’ Network for the Observation of Marine BiodivERsity, http://www.comber.hcmr.gr, which has been initiated under the ViBRANT EU e-infrastructure. It is designed and implemented for divers and snorkelers who are interested in participating in marine biodiversity citizen science projects. It shows the necessity of engaging the broader community in the marine biodiversity monitoring and research projects, networks and initiatives. It analyses the stakeholders, the industry and the relevant markets involved in diving activities and their potential to sustain these activities. The principles, including data policy and rewards for the participating divers through their own data, upon which this project is based are thoroughly discussed. The results of the users analysis and lessons learned so far are presented. Future plans include promotion, links with citizen science web developments, data publishing tools, and development of new scientific hypotheses to be tested by the data collected so far.

Molecular biodiversity of Red Sea demosponges

KAUST Repository

Erpenbeck, Dirk

2016-01-07

Sponges are important constituents of coral reef ecosystems, including those around the Arabian Peninsula. Despite their importance, our knowledge on demosponge diversity in this area is insufficient to recognize, for example, faunal changes caused by anthropogenic disturbances. We here report the first assessment of demosponge molecular biodiversity from Arabia, with focus on the Saudi Arabian Red Sea, based on mitochondrial and nuclear ribosomal molecular markers gathered in the framework of the Sponge Barcoding Project. We use a rapid molecular screening approach on Arabian demosponge collections and analyze results in comparison against published material in terms of biodiversity. We use a variable region of 28S rDNA, applied for the first time in the assessment of demosponge molecular diversity. Our data constitutes a solid foundation for a future more comprehensive understanding of sponge biodiversity of the Red Sea and adjacent waters.

Molecular biodiversity of Red Sea demosponges

KAUST Repository

Erpenbeck, Dirk; Voigt, Oliver; Al-Aidaroos, Ali M.; Berumen, Michael L.; Bü ttner, Gabriele; Catania, Daniela; Guirguis, Adel Naguib; Paulay, Gustav; Schä tzle, Simone; Wö rheide, Gert

2016-01-01

Sponges are important constituents of coral reef ecosystems, including those around the Arabian Peninsula. Despite their importance, our knowledge on demosponge diversity in this area is insufficient to recognize, for example, faunal changes caused by anthropogenic disturbances. We here report the first assessment of demosponge molecular biodiversity from Arabia, with focus on the Saudi Arabian Red Sea, based on mitochondrial and nuclear ribosomal molecular markers gathered in the framework of the Sponge Barcoding Project. We use a rapid molecular screening approach on Arabian demosponge collections and analyze results in comparison against published material in terms of biodiversity. We use a variable region of 28S rDNA, applied for the first time in the assessment of demosponge molecular diversity. Our data constitutes a solid foundation for a future more comprehensive understanding of sponge biodiversity of the Red Sea and adjacent waters.

Insights and Opportunities Offered by a Rapid Ecosystem Service Assessment in Promoting a Conservation Agenda in an Urban Biodiversity Hotspot

Directory of Open Access Journals (Sweden)

Patrick J. O'Farrell

2012-09-01

Full Text Available Regional and global scale ecosystem service assessments have demonstrated the socioeconomic value of protecting biodiversity and have been integrated into associated policy. Local government decision makers are still unsure of the applicability, return on investment, and usefulness of these assessments in aiding their decision making. Cape Town, a developing city in a globally recognized biodiversity hotspot, has numerous competing land uses. City managers, with a tightly constrained budget, requested an exploratory study on the links between ecosystem services and biodiversity conservation within this municipal area. We set out to develop and test a simple and rapid ecosystem service assessment method aimed at determining the contribution natural vegetation remnants make to ecosystem service provision. We took selected services, identified in conjunction with city managers, and assessed these in two ways. First we used an area weighted approach to attribute services to vegetation types and assessed how these had changed through time and into the future given development needs. Second, we did a regulatory and cultural service remnant distance analysis to better understand proximity effects and linkages. Provisioning services were found to have been most severely affected through vegetation transformation. Regulatory services have been similarly affected, and these losses are more significant because regulatory services can only function in situ and cannot be outsourced in the way provisioning services can. The most significant losses were in coastal zone protection and flood mitigation services, both of which will be placed under even greater pressure given the predicted changes in climatic regimes. The role of remnant vegetation in regulating and cultural services was shown to be a significant additional consideration in making the case for conservation in the city. Our rapid assessment approach does not allow for nuanced and individual

Horizontal gene transfer and mobile genetic elements in marine systems.

Science.gov (United States)

Sobecky, Patricia A; Hazen, Tracy H

2009-01-01

The pool of mobile genetic elements (MGE) in microbial communities consists of viruses, plasmids, and associated elements (insertion sequences, transposons, and integrons) that are either self-transmissible or use mobile plasmids and viruses as vehicles for their dissemination. This mobilome facilitates the horizontal transfer of genes that promote the evolution and adaptation of microbial communities. Efforts to characterize MGEs from microbial populations resident in a variety of ecological habitats have revealed a surprisingly novel and seemingly untapped biodiversity. To better understand the impact of horizontal gene transfer (HGT), as well as the agents that promote HGT in marine ecosystems and to determine whether or not environmental parameters can effect the composition and structure of the mobilome in marine microbial communities, information on the distribution, diversity, and ecological traits of the marine mobilome is presented. In this chapter we discuss recent insights gained from different methodological approaches used to characterize the biodiversity and ecology of MGE in marine environments and their contributions to HGT. In addition, we present case studies that highlight specific HGT examples in coastal, open-ocean, and deep-sea marine ecosystems.

Marine Polysaccharides: A Source of Bioactive Molecules for Cell Therapy and Tissue Engineering

Directory of Open Access Journals (Sweden)

Anne-Marie Fischer

2011-09-01

Full Text Available The therapeutic potential of natural bioactive compounds such as polysaccharides, especially glycosaminoglycans, is now well documented, and this activity combined with natural biodiversity will allow the development of a new generation of therapeutics. Advances in our understanding of the biosynthesis, structure and function of complex glycans from mammalian origin have shown the crucial role of this class of molecules to modulate disease processes and the importance of a deeper knowledge of structure-activity relationships. Marine environment offers a tremendous biodiversity and original polysaccharides have been discovered presenting a great chemical diversity that is largely species specific. The study of the biological properties of the polysaccharides from marine eukaryotes and marine prokaryotes revealed that the polysaccharides from the marine environment could provide a valid alternative to traditional polysaccharides such as glycosaminoglycans. Marine polysaccharides present a real potential for natural product drug discovery and for the delivery of new marine derived products for therapeutic applications.

Biodiversity data requirements for systematic conservation planning in the Mediterranean Sea

DEFF Research Database (Denmark)

Levin, Noam; Coll, Marta; Fraschetti, Simonetta

2014-01-01

The Mediterranean Sea’s biodiversity and ecosystems face many threats due to anthropogenic factors. Some of these include high human population growth, coastal urbanization, accelerated human activities and climate change. To enhance the formation of a science-based system of marine protected areas......, the Mediterranean Sea is lagging behind other marine regions where conservation planning adopting rigorous criteria has been applied in the past 20 years. Therefore, we call upon scientists, governments and international governmental and non-governmental conservation organizations to harmonize current approaches...

Road-networks, a practical indicator of human impacts on biodiversity in Tropical forests

International Nuclear Information System (INIS)

Hosaka, T; Yamada, T; Okuda, T

2014-01-01

Tropical forests sustain the most diverse plants and animals in the world, but are also being lost most rapidly. Rapid assessment and monitoring using remote sensing on biodiversity of tropical forests is needed to predict and evaluate biodiversity loss by human activities. Identification of reliable indicators of forest biodiversity and/or its loss is an urgent issue. In the present paper, we propose the density of road networks in tropical forests can be a good and practical indicator of human impacts on biodiversity in tropical forests through reviewing papers and introducing our preliminary survey in peninsular Malaysia. Many previous studies suggest a strong negative impact of forest roads on biodiversity in tropical rainforests since they changes microclimate, soil properties, drainage patterns, canopy openness and forest accessibility. Moreover, our preliminary survey also showed that even a narrow logging road (6 m wide) significantly lowered abundance of dung beetles (well-known bio-indicator in biodiversity survey in tropical forests) near the road. Since these road networks are readily to be detected with remote sensing approach such as aerial photographs and Lider, regulation and monitoring of the road networks using remote sensing techniques is a key to slow down the rate of biodiversity loss due to forest degradation in tropical forests

Road-networks, a practical indicator of human impacts on biodiversity in Tropical forests

Science.gov (United States)

Hosaka, T.; Yamada, T.; Okuda, T.

2014-02-01

Tropical forests sustain the most diverse plants and animals in the world, but are also being lost most rapidly. Rapid assessment and monitoring using remote sensing on biodiversity of tropical forests is needed to predict and evaluate biodiversity loss by human activities. Identification of reliable indicators of forest biodiversity and/or its loss is an urgent issue. In the present paper, we propose the density of road networks in tropical forests can be a good and practical indicator of human impacts on biodiversity in tropical forests through reviewing papers and introducing our preliminary survey in peninsular Malaysia. Many previous studies suggest a strong negative impact of forest roads on biodiversity in tropical rainforests since they changes microclimate, soil properties, drainage patterns, canopy openness and forest accessibility. Moreover, our preliminary survey also showed that even a narrow logging road (6 m wide) significantly lowered abundance of dung beetles (well-known bio-indicator in biodiversity survey in tropical forests) near the road. Since these road networks are readily to be detected with remote sensing approach such as aerial photographs and Lider, regulation and monitoring of the road networks using remote sensing techniques is a key to slow down the rate of biodiversity loss due to forest degradation in tropical forests.

A new procedure for marinating fresh anchovies and ensuring the rapid destruction of Anisakis larvae.

Science.gov (United States)

Sánchez-Monsalvez, I; de Armas-Serra, C; Martínez, J; Dorado, M; Sánchez, A; Rodríguez-Caabeiro, F

2005-05-01

The consumption of marinated anchovies is the main route of transmission of anisakiasis in Spain. Because this country is one of the world's major tourist destinations, this traditional food also poses a potential health risk to millions of foreign visitors. Anisakis larvae are not destroyed by the traditional marinating procedure, and alternative methods, such as long-term storage in brine, freezing, or hydrostatic pressure treatment, all present major difficulties. In this study, we used high food-grade acetic acid concentrations (10, 20, 30, and 40% [vol/vol] in line with the quantum satis rule) to destroy these larvae rapidly, and we report data on the survival of Anisakis larvae exposed directly to different marinades and when the larvae are placed under the fish musculature. The percentage of salt and acetic acid in the fish tissue water phase was also determined. A marinating procedure is proposed that ensures the rapid death of Anisakis through the use of strong acetic acid concentrations. Posttreatment washes with water reduce these to levels acceptable to consumers. The sensory characteristics of the product were shown to be satisfactory. The actual selection of an acetic acid concentration for marinating depends on costs and the processing time available. The physiological stress of the larvae exposed to the different marinades was determined by measuring the levels of their stress proteins. The latter are good indicators of injury and might reflect the infectivity of larvae. In addition, we also used a rat model to determine the infectivity of larvae considered microscopically dead.

Biodiversity of Macrofauna Associated with Sponges across Ecological Gradients in the Central Red Sea

KAUST Repository

Kandler, Nora

2015-01-01

Between 33 and 91 percent of marine species are currently undescribed, with the majority occurring in tropical and offshore environments. Sponges act as important microhabitats and promote biodiversity by harboring a wide variety of macrofauna

Biodiversity links above and below the marine sediment-water interface that may influence community stability

NARCIS (Netherlands)

Austen, M.C.; Lambshead, P.J.D.; Hutchings, P.; Boucher, G.; Snelgrove, P.V.R.; Heip, C.H.R.; King, G.; Koike, I.; Smith, C.

2002-01-01

Linkages across the sediment-water interface (SWI) between biodiversity and community stability appear to exist but are very poorly studied. Processes by which changes in biodiversity could affect stability on the other side of the SWI include carbon transfer during feeding, decomposition of organic

Synthesis Report As part of the project Biodiversity of the High Seas

NARCIS (Netherlands)

Rijnsdorp, A.D.; Molenaar, E.J.; Oude Elferink, A.G.; Heessen, H.J.L.; Karman, C.C.

2009-01-01

Human activities in areas outside national jurisdiction (ABNJ) which comprise the high seas and the ‘Area’ (the seabed beyond the limits of national jurisdiction) are increasing and may threaten marine biodiversity in these areas. While fisheries are in general considered as the most threatening,

Indicator-based assessment of marine biological diversity – lessons from 10 case studies across the European Seas

Directory of Open Access Journals (Sweden)

Laura Uusitalo

2016-09-01

Full Text Available The Marine Strategy Framework Directive requires the environmental status of European marine waters to be assessed using biodiversity as one out of 11 descriptors, but the complexity of marine biodiversity and its large span across latitudinal and salinity gradients have been a challenge to the scientific community aiming to produce approaches for integrating information from a broad range of indicators. The Nested Environmental status Assessment Tool (NEAT, developed for the integrated assessment of the status of marine waters, was applied to ten marine ecosystems to test its applicability and compare biodiversity assessments across the four European regional seas. We evaluate the assessment results as well as the assessment designs of the ten cases, and how the assessment design, particularly the choices made regarding the area and indicator selection, affected the results. The results show that only 2 out of the 10 case study areas show more than 50 % probability of being in good status in respect of biodiversity. No strong pattern among the ecosystem components across the case study areas could be detected, but marine mammals, birds, and benthic vegetation indicators tended to indicate poor status while zooplankton indicators indicated good status when included into the assessment. The analysis shows that the assessment design, including the selection of indicators, their target values, geographical resolution and habitats to be assessed, has potentially a high impact on the result, and the assessment structure needs to be understood in order to make an informed assessment. Moreover, recommendations are provided for the best practice of using NEAT for marine status assessments.

Biodiversity of nematode assemblages from the region of the Clarion-Clipperton Fracture Zone, an area of commercial mining interest.

Science.gov (United States)

Lambshead, P John D; Brown, Caroline J; Ferrero, Timothy J; Hawkins, Lawrence E; Smith, Craig R; Mitchell, Nicola J

2003-01-09

The possibility for commercial mining of deep-sea manganese nodules is currently under exploration in the abyssal Clarion-Clipperton Fracture Zone. Nematodes have potential for biomonitoring of the impact of commercial activity but the natural biodiversity is unknown. We investigate the feasibility of nematodes as biomonitoring organisms and give information about their natural biodiversity. The taxonomic composition (at family to genus level) of the nematode fauna in the abyssal Pacific is similar, but not identical to, the North Atlantic. Given the immature state of marine nematode taxonomy, it is not possible to comment on the commonality or otherwise of species between oceans. The between basin differences do not appear to be directly linked to current ecological factors. The abyssal Pacific region (including the Fracture Zone) could be divided into two biodiversity subregions that conform to variations in the linked factors of flux to the benthos and of sedimentary characteristics. Richer biodiversity is associated with areas of known phytodetritus input and higher organic-carbon flux. Despite high reported sample diversity, estimated regional diversity is less than 400 species. The estimated regional diversity of the CCFZ is a tractable figure for biomonitoring of commercial activities in this region using marine nematodes, despite the immature taxonomy (i.e. most marine species have not been described) of the group. However, nematode ecology is in dire need of further study.

Rapid grounding line migration induced by internal variability of a marine-terminating ice stream

Science.gov (United States)

Robel, A.; Schoof, C.; Tziperman, E.

2013-12-01

Numerous studies have found significant variability in the velocity of ice streams to be a prominent feature of geomorphologic records in the Siple Coast (Catania et al. 2012) and other regions in West Antarctica (Dowdeswell et al. 2008). Observations indicate that grounding line position is strongly influenced by ice stream variability, producing rapid grounding line migration in the recent past (Catania et al. 2006) and the modern (Joughin & Tulaczyk 2002). We analyze the interaction of grounding line mass flux and position in a marine-terminating ice stream using a stretch-coordinate flowline model. This model is based on that described in Schoof (2007), with a mesh refined near the grounding line to ensure accurate resolution of the mechanical transition zone. Here we have added lateral shear stress (Dupont & Alley 2005) and an undrained plastic bed (Tulaczyk et al. 2000). The parameter dependence of ice stream variability seen in this model compares favorably to both simpler (Robel et al. 2013) and more complex (van der Wel et al. 2013) models, though with some key differences. We find that thermally-induced internal ice stream variability can cause very rapid grounding line migration even in the absence of retrograde bed slopes or external forcing. Activation waves propagate along the ice stream length and trigger periods of rapid grounding line migration. We compare the behavior of the grounding line due to internal ice stream variability to changes triggered externally at the grounding line such as the rapid disintegration of buttressing ice shelves. Implications for Heinrich events and the Marine Ice Sheet Instability are discussed.

Molecular biodiversity of Red Sea demosponges.

Science.gov (United States)

Erpenbeck, Dirk; Voigt, Oliver; Al-Aidaroos, Ali M; Berumen, Michael L; Büttner, Gabriele; Catania, Daniela; Guirguis, Adel Naguib; Paulay, Gustav; Schätzle, Simone; Wörheide, Gert

2016-04-30

Sponges are important constituents of coral reef ecosystems, including those around the Arabian Peninsula. Despite their importance, our knowledge on demosponge diversity in this area is insufficient to recognize, for example, faunal changes caused by anthropogenic disturbances. We here report the first assessment of demosponge molecular biodiversity from Arabia, with focus on the Saudi Arabian Red Sea, based on mitochondrial and nuclear ribosomal molecular markers gathered in the framework of the Sponge Barcoding Project. We use a rapid molecular screening approach on Arabian demosponge collections and analyze results in comparison against published material in terms of biodiversity. We use a variable region of 28S rDNA, applied for the first time in the assessment of demosponge molecular diversity. Our data constitutes a solid foundation for a future more comprehensive understanding of sponge biodiversity of the Red Sea and adjacent waters. Copyright © 2015 Elsevier Ltd. All rights reserved.

Key Biodiversity Areas in the Philippines: Priorities for Conservation

Directory of Open Access Journals (Sweden)

R.G.R. Ambal

2012-08-01

Full Text Available A process for identifying Key Biodiversity Areas (KBAs for the Philippines was undertaken in two phases. The 128 terrestrial and freshwater KBAs were identified in 2006 and the 123 marine KBAs were identified in 2009. A total of 228 KBAs resulted from the integration of the terrestrial, freshwater and marine KBAs. These KBAs represent the known habitat of 855 globally important species of plants, corals, molluscs, elasmobranchs, fishes, amphibians, reptiles, birds and mammals in the country. Inclusion of these KBAs in the country’s protected area system will be a significant step towards ensuring the conservation of the full scope of the country’s natural heritage.

Relationships between meiofaunal biodiversity and prokaryotic heterotrophic production in different tropical habitats and oceanic regions.

Science.gov (United States)

Pusceddu, Antonio; Gambi, Cristina; Corinaldesi, Cinzia; Scopa, Mariaspina; Danovaro, Roberto

2014-01-01

Tropical marine ecosystems are among the most diverse of the world oceans, so that assessing the linkages between biodiversity and ecosystem functions (BEF) is a crucial step to predict consequences of biodiversity loss. Most BEF studies in marine ecosystems have been carried out on macrobenthic diversity, whereas the influence of the meiofauna on ecosystem functioning has received much less attention. We compared meiofaunal and nematode biodiversity and prokaryotic heterotrophic production across seagrass, mangrove and reef sediments in the Caribbean, Celebes and Red Seas. For all variables we report the presence of differences among habitats within the same region, and among regions within the same habitat. In all regions, the richness of meiofaunal taxa in reef and seagrass sediments is higher than in mangrove sediments. The sediments of the Celebes Sea show the highest meiofaunal biodiversity. The composition of meiofaunal assemblages varies significantly among habitats in the same region. The nematode beta diversity among habitats within the same region is higher than the beta diversity among regions. Although one site per habitat was considered in each region, these results suggest that the composition of meiofaunal assemblages varies primarily among biogeographic regions, whereas the composition of nematode assemblages varies more considerably among habitats. Meiofauna and nematode biodiversity and prokaryotic heterotrophic production, even after the removal of covariate effects linked with longitude and the quantity and nutritional quality of organic matter, are positively and linearly linked both across regions and within each habitat type. Our results confirm that meiofauna and nematode biodiversity may influence benthic prokaryotic activity, which, in turn, implies that diversity loss could have negative impacts on ecosystem functioning in these systems.

Relationships between meiofaunal biodiversity and prokaryotic heterotrophic production in different tropical habitats and oceanic regions.

Directory of Open Access Journals (Sweden)

Antonio Pusceddu

Full Text Available Tropical marine ecosystems are among the most diverse of the world oceans, so that assessing the linkages between biodiversity and ecosystem functions (BEF is a crucial step to predict consequences of biodiversity loss. Most BEF studies in marine ecosystems have been carried out on macrobenthic diversity, whereas the influence of the meiofauna on ecosystem functioning has received much less attention. We compared meiofaunal and nematode biodiversity and prokaryotic heterotrophic production across seagrass, mangrove and reef sediments in the Caribbean, Celebes and Red Seas. For all variables we report the presence of differences among habitats within the same region, and among regions within the same habitat. In all regions, the richness of meiofaunal taxa in reef and seagrass sediments is higher than in mangrove sediments. The sediments of the Celebes Sea show the highest meiofaunal biodiversity. The composition of meiofaunal assemblages varies significantly among habitats in the same region. The nematode beta diversity among habitats within the same region is higher than the beta diversity among regions. Although one site per habitat was considered in each region, these results suggest that the composition of meiofaunal assemblages varies primarily among biogeographic regions, whereas the composition of nematode assemblages varies more considerably among habitats. Meiofauna and nematode biodiversity and prokaryotic heterotrophic production, even after the removal of covariate effects linked with longitude and the quantity and nutritional quality of organic matter, are positively and linearly linked both across regions and within each habitat type. Our results confirm that meiofauna and nematode biodiversity may influence benthic prokaryotic activity, which, in turn, implies that diversity loss could have negative impacts on ecosystem functioning in these systems.

First insights into the biodiversity and biogeography of the Southern Ocean deep sea

NARCIS (Netherlands)

Brandt, A.; Gooday, A.J.; Brandao, S.N.; Mesel, de I.G.

2007-01-01

Shallow marine benthic communities around Antarctica show high levels of endemism, gigantism, slow growth, longevity and late maturity, as well as adaptive radiations that have generated considerable biodiversity in some taxa. The deeper parts of the Southern Ocean exhibit some unique environmental

IndOBIS, an Ocean Biogeographic Information System for assessment and conservation of Indian Ocean biodiversity

Digital Repository Service at National Institute of Oceanography (India)

Chavan, V.S.; Achuthankutty, C.T.; Berghe, E.V.; Wafar, M.V.M.

Compilation of inventories of components of coastal and marine biodiversity of Indian Ocean is hampered by several factors: low effort by some countries, preference to certain taxon, dwindling taxonomic expertise, low infrastructure of Information...

Ingestion of marine plastic debris by green turtle(Chelonia mydas) in davao gulf, Mindanao, Philippines

NARCIS (Netherlands)

Abreo, Neil A.S.; Macusi, Edison D.; Blatchley, Darrell D.

2016-01-01

Marine plastic debris is a global problem that is threatening marine biodiversity. Different marine organisms have been exposed to the lethal and sub-lethal effects of this problem. Sub-lethal effects include reduced fitness due to reduced feeding, reduced reproductive output, limb amputation,

A Hierarchical and Dynamic Seascape Framework for Scaling and Comparing Ocean Biodiversity Observations

Science.gov (United States)

Kavanaugh, M.; Muller-Karger, F. E.; Montes, E.; Santora, J. A.; Chavez, F.; Messié, M.; Doney, S. C.

2016-02-01

The pelagic ocean is a complex system in which physical, chemical and biological processes interact to shape patterns on multiple spatial and temporal scales and levels of ecological organization. Monitoring and management of marine seascapes must consider a hierarchical and dynamic mosaic, where the boundaries, extent, and location of features change with time. As part of a Marine Biodiversity Observing Network demonstration project, we conducted a multiscale classification of dynamic coastal seascapes in the northeastern Pacific and Gulf of Mexico using multivariate satellite and modeled data. Synoptic patterns were validated using mooring and ship-based observations that spanned multiple trophic levels and were collected as part of several long-term monitoring programs, including the Monterey Bay and Florida Keys National Marine Sanctuaries. Seascape extent and habitat diversity varied as a function of both seasonal and interannual forcing. We discuss the patterns of in situ observations in the context of seascape dynamics and the effect on rarefaction, spatial patchiness, and tracking and comparing ecosystems through time. A seascape framework presents an effective means to translate local biodiversity measurements to broader spatiotemporal scales, scales relevant for modeling the effects of global change and enabling whole-ecosystem management in the dynamic ocean.

Marine Sciences: from natural history to ecology and back, on Darwin's shoulders

Directory of Open Access Journals (Sweden)

Ferdinando Boero

2010-12-01

Full Text Available The naturalist Charles Darwin founded modern ecology, considering in a single conceptual framework the manifold aspects regarding the organization of life at various levels of complexity and its relationship with the physical world. The development of powerful analytical tools led to abandon Darwin's natural history and to transform naturalists, as Darwin labelled himself, into the practitioners of more focused disciplines, aimed at tackling specific problems that considered the various aspects of the organization of life in great detail but, also, in isolation from each other. Among the various disciplines that stemmed from the Darwinian method, ecology was further split into many branches, and marine ecology was no exception. The compartmentalization of the marine realm into several sub-domains (e.g., plankton, benthos, nekton led to neglect of the connections linking the various parts that were separated for the ease of analyses that, in this way, prevented synthetic visions. The way marine sciences were studied also led to separate visions depending on the employed tools, so that ship-based biological oceanography developed almost separately from marine station-based marine biology. The necessity of putting together such concepts as biodiversity and ecosystem functioning is rapidly leading to synthetic approaches that re-discover the historical nature of ecology, leading to the dawn of a new natural history.

Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status

KAUST Repository

Danovaro, Roberto; Carugati, Laura; Berzano, Marco; Cahill, Abigail E.; Carvalho, Susana; Chenuil, Anne; Corinaldesi, Cinzia; Cristina, Sonia; David, Romain; Dell'Anno, Antonio; Dzhembekova, Nina; Garcé s, Esther; Gasol, Joseph M.; Goela, Priscila; Fé ral, Jean-Pierre; Ferrera, Isabel; Forster, Rodney M.; Kurekin, Andrey A.; Rastelli, Eugenio; Marinova, Veselka; Miller, Peter I.; Moncheva, Snejana; Newton, Alice; Pearman, John K.; Pitois, Sophie G.; Reñ é , Albert; Rodrí guez-Ezpeleta, Naiara; Saggiomo, Vincenzo; Simis, Stefan G. H.; Stefanova, Kremena; Wilson, Christian; Lo Martire, Marco; Greco, Silvestro; Cochrane, Sabine K. J.; Mangoni, Olga; Borja, Angel

2016-01-01

Marine environmental monitoring has tended to focus on site-specific methods of investigation. These traditional methods have low spatial and temporal resolution and are relatively labor intensive per unit area/time that they cover. To implement the Marine Strategy Framework Directive (MSFD), European Member States are required to improve marine monitoring and design monitoring networks. This can be achieved by developing and testing innovative and cost-effective monitoring systems, as well as indicators of environmental status. Here, we present several recently developed methodologies and technologies to improve marine biodiversity indicators and monitoring methods. The innovative tools are discussed concerning the technologies presently utilized as well as the advantages and disadvantages of their use in routine monitoring. In particular, the present analysis focuses on: (i) molecular approaches, including microarray, Real Time quantitative PCR (qPCR), and metagenetic (metabarcoding) tools; (ii) optical (remote) sensing and acoustic methods; and (iii) in situ monitoring instruments. We also discuss their applications in marine monitoring within the MSFD through the analysis of case studies in order to evaluate their potential utilization in future routine marine monitoring. We show that these recently-developed technologies can present clear advantages in accuracy, efficiency and cost.

Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status

KAUST Repository

Danovaro, Roberto

2016-11-23

Marine environmental monitoring has tended to focus on site-specific methods of investigation. These traditional methods have low spatial and temporal resolution and are relatively labor intensive per unit area/time that they cover. To implement the Marine Strategy Framework Directive (MSFD), European Member States are required to improve marine monitoring and design monitoring networks. This can be achieved by developing and testing innovative and cost-effective monitoring systems, as well as indicators of environmental status. Here, we present several recently developed methodologies and technologies to improve marine biodiversity indicators and monitoring methods. The innovative tools are discussed concerning the technologies presently utilized as well as the advantages and disadvantages of their use in routine monitoring. In particular, the present analysis focuses on: (i) molecular approaches, including microarray, Real Time quantitative PCR (qPCR), and metagenetic (metabarcoding) tools; (ii) optical (remote) sensing and acoustic methods; and (iii) in situ monitoring instruments. We also discuss their applications in marine monitoring within the MSFD through the analysis of case studies in order to evaluate their potential utilization in future routine marine monitoring. We show that these recently-developed technologies can present clear advantages in accuracy, efficiency and cost.

Interactive Effects of Nitrogen and Climate Change on Biodiversity

Science.gov (United States)

Porter, E. M.; Bowman, W. D.; Clark, C. M.; Compton, J. E.; Pardo, L. H.; Soong, J.

2011-12-01

Biodiversity has been described as the diversity of life on earth within species, between species and in ecosystems. Biodiversity contributes to regulating ecosystem services like climate, flood, disease, and water quality regulation. Biodiversity also supports and sustains ecosystem services that provide material goods like food, fiber, fuel, timber and water, and to non-material benefits like educational, recreational, spiritual, and aesthetic ecosystem services. The Millennium Ecosystem Assessment estimated that the rate of biodiversity loss due to human activity in the last 50 years has been more rapid than at any other time in human history, and that many of the drivers of biodiversity loss are increasing. The strongest drivers of biodiversity loss include habitat loss, overexploitation, invasive species, climate change, and pollution, including pollution from reactive nitrogen. Of these stressors, climate change and reactive nitrogen from anthropogenic activities are causing some of the most rapid changes. Climate change is causing warming trends that result in consistent patterns of poleward and elevational range shifts of flora and fauna, causing changes in biodiversity. Warming has also resulted in changes in phenology, particularly the earlier onset of spring events, migration, and lengthening of the growing season, disrupting predator-prey and plant-pollinator interactions. In addition to warming, elevated carbon dioxide by itself can affect biodiversity by influencing plant growth, soil water, tissue stoichiometry, and trophic interactions. Nitrogen enrichment also impacts ecosystems and biodiversity in a variety of ways. Nitrogen enhances plant growth, but has been shown to favor invasive, fast-growing species over native species adapted to low nitrogen conditions. Although there have been a limited number of empirical studies on climate change and nitrogen interactions, inferences can be drawn from observed responses to each stressor by itself. For

Biodiversity of nematode assemblages from the region of the Clarion-Clipperton Fracture Zone, an area of commercial mining interest

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Hawkins Lawrence E

2003-01-01

Full Text Available Abstract Background The possibility for commercial mining of deep-sea manganese nodules is currently under exploration in the abyssal Clarion-Clipperton Fracture Zone. Nematodes have potential for biomonitoring of the impact of commercial activity but the natural biodiversity is unknown. We investigate the feasibility of nematodes as biomonitoring organisms and give information about their natural biodiversity. Results The taxonomic composition (at family to genus level of the nematode fauna in the abyssal Pacific is similar, but not identical to, the North Atlantic. Given the immature state of marine nematode taxonomy, it is not possible to comment on the commonality or otherwise of species between oceans. The between basin differences do not appear to be directly linked to current ecological factors. The abyssal Pacific region (including the Fracture Zone could be divided into two biodiversity subregions that conform to variations in the linked factors of flux to the benthos and of sedimentary characteristics. Richer biodiversity is associated with areas of known phytodetritus input and higher organic-carbon flux. Despite high reported sample diversity, estimated regional diversity is less than 400 species. Conclusion The estimated regional diversity of the CCFZ is a tractable figure for biomonitoring of commercial activities in this region using marine nematodes, despite the immature taxonomy (i.e. most marine species have not been described of the group. However, nematode ecology is in dire need of further study.

Biodiversity mediates top-down control in eelgrass ecosystems: a global comparative-experimental approach.

Science.gov (United States)

Duffy, J Emmett; Reynolds, Pamela L; Boström, Christoffer; Coyer, James A; Cusson, Mathieu; Donadi, Serena; Douglass, James G; Eklöf, Johan S; Engelen, Aschwin H; Eriksson, Britas Klemens; Fredriksen, Stein; Gamfeldt, Lars; Gustafsson, Camilla; Hoarau, Galice; Hori, Masakazu; Hovel, Kevin; Iken, Katrin; Lefcheck, Jonathan S; Moksnes, Per-Olav; Nakaoka, Masahiro; O'Connor, Mary I; Olsen, Jeanine L; Richardson, J Paul; Ruesink, Jennifer L; Sotka, Erik E; Thormar, Jonas; Whalen, Matthew A; Stachowicz, John J

2015-07-01

Nutrient pollution and reduced grazing each can stimulate algal blooms as shown by numerous experiments. But because experiments rarely incorporate natural variation in environmental factors and biodiversity, conditions determining the relative strength of bottom-up and top-down forcing remain unresolved. We factorially added nutrients and reduced grazing at 15 sites across the range of the marine foundation species eelgrass (Zostera marina) to quantify how top-down and bottom-up control interact with natural gradients in biodiversity and environmental forcing. Experiments confirmed modest top-down control of algae, whereas fertilisation had no general effect. Unexpectedly, grazer and algal biomass were better predicted by cross-site variation in grazer and eelgrass diversity than by global environmental gradients. Moreover, these large-scale patterns corresponded strikingly with prior small-scale experiments. Our results link global and local evidence that biodiversity and top-down control strongly influence functioning of threatened seagrass ecosystems, and suggest that biodiversity is comparably important to global change stressors. © 2015 John Wiley & Sons Ltd/CNRS.

Flourishing ocean drives the end-Permian marine mass extinction.

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Schobben, Martin; Stebbins, Alan; Ghaderi, Abbas; Strauss, Harald; Korn, Dieter; Korte, Christoph

2015-08-18

The end-Permian mass extinction, the most severe biotic crisis in the Phanerozoic, was accompanied by climate change and expansion of oceanic anoxic zones. The partitioning of sulfur among different exogenic reservoirs by biological and physical processes was of importance for this biodiversity crisis, but the exact role of bioessential sulfur in the mass extinction is still unclear. Here we show that globally increased production of organic matter affected the seawater sulfate sulfur and oxygen isotope signature that has been recorded in carbonate rock spanning the Permian-Triassic boundary. A bifurcating temporal trend is observed for the strata spanning the marine mass extinction with carbonate-associated sulfate sulfur and oxygen isotope excursions toward decreased and increased values, respectively. By coupling these results to a box model, we show that increased marine productivity and successive enhanced microbial sulfate reduction is the most likely scenario to explain these temporal trends. The new data demonstrate that worldwide expansion of euxinic and anoxic zones are symptoms of increased biological carbon recycling in the marine realm initiated by global warming. The spatial distribution of sulfidic water column conditions in shallow seafloor environments is dictated by the severity and geographic patterns of nutrient fluxes and serves as an adequate model to explain the scale of the marine biodiversity crisis. Our results provide evidence that the major biodiversity crises in Earth's history do not necessarily implicate an ocean stripped of (most) life but rather the demise of certain eukaryotic organisms, leading to a decline in species richness.

Seventy-One Important Questions for the Conservation of Marine Biodiversity

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PARSONS, E C M; FAVARO, BRETT; AGUIRRE, A ALONSO; BAUER, AMY L; BLIGHT, LOUISE K; CIGLIANO, JOHN A; COLEMAN, MELINDA A; CÔTÉ, ISABELLE M; DRAHEIM, MEGAN; FLETCHER, STEPHEN; FOLEY, MELISSA M; JEFFERSON, REBECCA; JONES, MIRANDA C; KELAHER, BRENDAN P; LUNDQUIST, CAROLYN J; MCCARTHY, JULIE-BETH; NELSON, ANNE; PATTERSON, KATHERYN; WALSH, LESLIE; WRIGHT, ANDREW J; SUTHERLAND, WILLIAM J

2014-01-01

The ocean provides food, economic activity, and cultural value for a large proportion of humanity. Our knowledge of marine ecosystems lags behind that of terrestrial ecosystems, limiting effective protection of marine resources. We describe the outcome of 2 workshops in 2011 and 2012 to establish a list of important questions, which, if answered, would substantially improve our ability to conserve and manage the world’s marine resources. Participants included individuals from academia, government, and nongovernment organizations with broad experience across disciplines, marine ecosystems, and countries that vary in levels of development. Contributors from the fields of science, conservation, industry, and government submitted questions to our workshops, which we distilled into a list of priority research questions. Through this process, we identified 71 key questions. We grouped these into 8 subject categories, each pertaining to a broad component of marine conservation: fisheries, climate change, other anthropogenic threats, ecosystems, marine citizenship, policy, societal and cultural considerations, and scientific enterprise. Our questions address many issues that are specific to marine conservation, and will serve as a road map to funders and researchers to develop programs that can greatly benefit marine conservation. Setenta y Un Preguntas Importantes para la Conservación de la Biodiversidad Marina Resumen Los océanos proporcionan alimento, actividad económica y valor cultural para una gran porción de la humanidad. Nuestro conocimiento de los ecosistemas marinos está atrasado con respecto al que tenemos de los ecosistemas terrestres, lo que limita la protección efectiva de los recursos naturales. Describimos el resultado de dos talleres en 2011 y 2012 para establecer una lista de preguntas importantes, las cuales al ser respondidas, mejorarían sustancialmente nuestra habilidad de conservar y manejar los recursos marinos del mundo. Entre los

An estimate of the recreational value of the Agulhas Plain, South Africa, with special reference to the value of plant biodiversity

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Beatrice Conradie

2013-05-01

Full Text Available The Agulhas Plain is a remarkable recreational site which combines the attraction of a pristine marine environment with exceptional plant biodiversity, rural tranquillity and the novelty of being at the southernmost tip of Africa. The resource is a public good to which the market cannot assign a full value. This paper presents an estimated recreational value based on individual travel cost models and a sample of 370 visitors surveyed in 2010. Trip demands were estimated with zero truncated negative binomial models to account for over-dispersion. The study established a recreational value of R2.167 billion in 2010 prices for the site as a whole. By partitioning the sample into visitors who indicated having been attracted or not to the area by its nature and biodiversity, a net biodiversity value of R2 866 per trip was calculated. Allocated between marine and terrestrial resources based on the proportion of activities related to each type of resource, the value of plant biodiversity was estimated to be R2 268 per hectare in 2010to 2010 prices.

Characterising and predicting benthic biodiversity for conservation planning in deepwater environments.

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Dunstan, Piers K; Althaus, Franziska; Williams, Alan; Bax, Nicholas J

2012-01-01

Understanding patterns of biodiversity in deep sea systems is increasingly important because human activities are extending further into these areas. However, obtaining data is difficult, limiting the ability of science to inform management decisions. We have used three different methods of quantifying biodiversity to describe patterns of biodiversity in an area that includes two marine reserves in deep water off southern Australia. We used biological data collected during a recent survey, combined with extensive physical data to model, predict and map three different attributes of biodiversity: distributions of common species, beta diversity and rank abundance distributions (RAD). The distribution of each of eight common species was unique, although all the species respond to a depth-correlated physical gradient. Changes in composition (beta diversity) were large, even between sites with very similar environmental conditions. Composition at any one site was highly uncertain, and the suite of species changed dramatically both across and down slope. In contrast, the distributions of the RAD components of biodiversity (community abundance, richness, and evenness) were relatively smooth across the study area, suggesting that assemblage structure (i.e. the distribution of abundances of species) is limited, irrespective of species composition. Seamounts had similar biodiversity based on metrics of species presence, beta diversity, total abundance, richness and evenness to the adjacent continental slope in the same depth ranges. These analyses suggest that conservation objectives need to clearly identify which aspects of biodiversity are valued, and employ an appropriate suite of methods to address these aspects, to ensure that conservation goals are met.

THE DEVELOPMENT OF MARINE SPATIAL PLANNING AND ITS APPLICATION FOR FLOATING FISH NET CULTURE

OpenAIRE

Dewayany Sutrisno

2017-01-01

Marine spatial planning has become the crucial issues for an archipelagic state such as Indonesia. The global market demand on marine economic species has been initiated the exploitation of the marine species which will become the hindrance in maintaining the sustainable marine biodiversity. Besides that, the degradation of marine species will also become the problem for traditional fishermen. Therefore, a model has to be employed to spatially manage the coastal waters as the alternative for ...

Contaminants reduce the richness and evenness of marine communities: A review and meta-analysis

International Nuclear Information System (INIS)

Johnston, Emma L.; Roberts, David A.

2009-01-01

Biodiversity of marine ecosystems is integral to their stability and function and is threatened by anthropogenic processes. We conducted a literature review and meta-analysis of 216 studies to understand the effects of common contaminants upon diversity in various marine communities. The most common diversity measures were species richness, the Shannon-Wiener index (H') and Pielou evenness (J). Largest effect sizes were observed for species richness, which tended to be the most sensitive index. Pollution was associated with marine communities containing fewer species or taxa than their pristine counterparts. Marine habitats did not vary in their susceptibility to contamination, rather a ∼40% reduction in richness occurred across all habitats. No class of contaminant was associated with significantly greater impacts on diversity than any other. Survey studies identified larger effects than laboratory or field experiments. Anthropogenic contamination is strongly associated with reductions in the species richness and evenness of marine habitats. - Contamination substantially reduces the biodiversity of marine communities in all major habitat types and across all major contaminant classes.

Comparison of marine spatial planning methods in Madagascar demonstrates value of alternative approaches.

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Thomas F Allnutt

Full Text Available The Government of Madagascar plans to increase marine protected area coverage by over one million hectares. To assist this process, we compare four methods for marine spatial planning of Madagascar's west coast. Input data for each method was drawn from the same variables: fishing pressure, exposure to climate change, and biodiversity (habitats, species distributions, biological richness, and biodiversity value. The first method compares visual color classifications of primary variables, the second uses binary combinations of these variables to produce a categorical classification of management actions, the third is a target-based optimization using Marxan, and the fourth is conservation ranking with Zonation. We present results from each method, and compare the latter three approaches for spatial coverage, biodiversity representation, fishing cost and persistence probability. All results included large areas in the north, central, and southern parts of western Madagascar. Achieving 30% representation targets with Marxan required twice the fish catch loss than the categorical method. The categorical classification and Zonation do not consider targets for conservation features. However, when we reduced Marxan targets to 16.3%, matching the representation level of the "strict protection" class of the categorical result, the methods show similar catch losses. The management category portfolio has complete coverage, and presents several management recommendations including strict protection. Zonation produces rapid conservation rankings across large, diverse datasets. Marxan is useful for identifying strict protected areas that meet representation targets, and minimize exposure probabilities for conservation features at low economic cost. We show that methods based on Zonation and a simple combination of variables can produce results comparable to Marxan for species representation and catch losses, demonstrating the value of comparing alternative

Geography of conservation spending, biodiversity, and culture.

Science.gov (United States)

McClanahan, T R; Rankin, P S

2016-10-01

We used linear and multivariate models to examine the associations between geography, biodiversity, per capita economic output, national spending on conservation, governance, and cultural traits in 55 countries. Cultural traits and social metrics of modernization correlated positively with national spending on conservation. The global distribution of this spending culture was poorly aligned with the distribution of biodiversity. Specifically, biodiversity was greater in the tropics where cultures tended to spend relatively less on conservation and tended to have higher collectivism, formalized and hierarchical leadership, and weaker governance. Consequently, nations lacking social traits frequently associated with modernization, environmentalism, and conservation spending have the largest component of Earth's biodiversity. This has significant implications for setting policies and priorities for resource management given that biological diversity is rapidly disappearing and cultural traits change slowly. Therefore, we suggest natural resource management adapt to and use characteristics of existing social organization rather than wait for or promote social values associated with conservation spending. Supporting biocultural traditions, engaging leaders to increase conservation commitments, cross-national efforts that complement attributes of cultures, and avoiding interference with nature may work best to conserve nature in collective and hierarchical societies. Spending in modernized nations may be a symbolic response to a symptom of economic development and environmental degradation, and here conservation actions need to ensure that biodiversity is not being lost. © 2016 Society for Conservation Biology.

Key Biodiversity Areas identification in the Upper Guinea forest biodiversity hotspot

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O.M.L. Kouame

2012-08-01

Full Text Available Priority-setting approaches and tools are commons ways to support the rapid extinction of species and their habitats and the effective allocation of resources for their conservation. The Key Biodiversity Area (KBA approach is a method for the identification of fine-scale priority areas for conservation. This process led bottom-up has been used in the Upper Guinea Forest Ecosystem of West Africa where human-induced changes have increased the extinction risk of several endemic and threatened species. The irreplaceability and vulnerability criteria commonly used in conservation planning have been used to identify key biodiversity areas in Ghana, Cote d’Ivoire, Liberia, Guinea and Sierra Leone. Point locality data were compiled from scientific reports, papers published in scientific journals and museum records. The delineation was conducted following a series of decision rules. In most cases existing IBA polygons and protected areas boundaries were used. For the new sites, temporary boundaries have been drawn and will be confirmed with land-use data. Preliminary KBA data were reviewed by specialists during formal workshops. One hundred and fifty four KBA have been identified in the five countries with 202 globally threatened species. Currently 63% of the KBA are protected. Two AZE sites still exist in the region. This assessment is a first step and is driven from the best available data at the time. There is a need to refine it with recent biodiversity surveys to assist decision-makers in achieving their conservation management goals.

Conservation physiology of marine fishes: state of the art and prospects for policy

DEFF Research Database (Denmark)

McKenzie, David J.; Axelsson, Michael; Chabot, Denis

2016-01-01

The state of the art of research on the environmental physiology of marine fishes is reviewed from the perspective of how it can contribute to conservation of biodiversity and fishery resources. A major constraint to application of physiological knowledge for conservation of marine fishes is the ...

Rapid assessment of risks to a mobile marine mammal in an ecosystem-scale marine protected area.

Science.gov (United States)

Grech, A; Marsh, H

2008-06-01

Ecosystem-scale networks of marine protected areas (MPAs) are important conservation tools, but their effectiveness is difficult to quantify in a time frame appropriate to species conservation because of uncertainties in the data available. The dugong (Dugong dugon) is a mobile marine species that occurs in shallow inshore waters of an ecosystem-scale network of MPAs (the Great Barrier Reef World Heritage Area [GBRWHA]). We developed a rapid approach to assess risk to dugongs in the region and evaluate options to ameliorate that risk. We used expert opinion and a Delphi technique to identify and rank 5 human factors with the potential to adversely affect dugongs and their sea grass habitats: netting, indigenous hunting, trawling, vessel traffic, and poor-quality terrestrial runoff. We then quantified and compared the distribution of these factors with a spatially explicit model of dugong distribution. We estimated that approximately 96% of habitat of high conservation value for dugongs in the GBRWHA is at low risk from human activities. Using a sensitivity analysis, we found that to decrease risk, commercial netting or indigenous hunting had to be reduced in remote areas and the effects of vessel traffic, terrestrial runoff, and commercial netting had to be reduced in urban areas. This approach enabled us to compare and rank risks so as to identify the most severe risks and locate specific sites that require further management attention.

Temporal and spatial differences between taxonomic and trait biodiversity in a large marine ecosystem: Causes and consequences

DEFF Research Database (Denmark)

Dencker, Tim Spaanheden; Pécuchet, Lauréne; Beukhof, Esther

2017-01-01

Biodiversity is a multifaceted concept, yet most biodiversity studies have taken a taxonomic approach, implying that all species are equally important. However, species do not contribute equally to ecosystem processes and differ markedly in their responses to changing environments. This recogniti...

Evolving Phytoplankton Stoichiometry Fueled Diversification of the Marine Biosphere

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Antonietta Quigg

2012-05-01

Full Text Available The availability of nutrients and the quantity and quality of food at the base of food webs have largely been ignored in discussions of the Phanerozoic record of biodiversity. We examine the role of nutrient availability and phytoplankton stoichiometry (the relative proportions of inorganic nutrients to carbon in the diversification of the marine biosphere. Nutrient availability and phytoplankton stoichiometry played a critical role in the initial diversification of the marine biosphere during the Neoproterozoic. Initial biosphere expansion during this time resulted in the massive sequestration of nutrients into biomass which, along with the geologically slow input of nutrients from land, set the stage for severe nutrient limitation and relatively constant marine biodiversity during the rest of the Paleozoic. Given the slow nutrient inputs from land and low recycling rates, the growth of early-to-middle Paleozoic metazoans remained limited by their having to expend energy to first “burn off” (respire excess carbon in food before the associated nutrients could be utilized for growth and reproduction; the relative equilibrium in marine biodiversity during the Paleozoic therefore appears to be real. Limited nutrient availability and the consequent nutrient imbalance may have delayed the appearance of more advanced carnivores until the Permo-Carboniferous, when widespread orogeny, falling sea level, the spread of forests, greater weathering rates, enhanced ocean circulation, oxygenation, and upwelling all combined to increase nutrient availability. During the Meso-Cenozoic, rising oxygen levels, the continued nutrient input from land, and, especially, increasing rates of bioturbation, enhanced nutrient availability, increasing the nutrient content of phytoplankton that fueled the diversification of the Modern Fauna.

Seamounts are hotspots of pelagic biodiversity in the open ocean.

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Morato, Telmo; Hoyle, Simon D; Allain, Valerie; Nicol, Simon J

2010-05-25

The identification of biodiversity hotspots and their management for conservation have been hypothesized as effective ways to protect many species. There has been a significant effort to identify and map these areas at a global scale, but the coarse resolution of most datasets masks the small-scale patterns associated with coastal habitats or seamounts. Here we used tuna longline observer data to investigate the role of seamounts in aggregating large pelagic biodiversity and to identify which pelagic species are associated with seamounts. Our analysis indicates that seamounts are hotspots of pelagic biodiversity. Higher species richness was detected in association with seamounts than with coastal or oceanic areas. Seamounts were found to have higher species diversity within 30-40 km of the summit, whereas for sets close to coastal habitat the diversity was lower and fairly constant with distance. Higher probability of capture and higher number of fish caught were detected for some shark, billfish, tuna, and other by-catch species. The study supports hypotheses that seamounts may be areas of special interest for management for marine pelagic predators.

Uranium isotope evidence for an expansion of marine anoxia during the end-Triassic extinction

NARCIS (Netherlands)

Jost, Adam B.; Bachan, Aviv; van de Schootbrugge, Bas; Lau, Kimberly V.; Weaver, Karrie L.; Maher, Kate; Payne, Jonathan L.

The end-Triassic extinction coincided with an increase in marine black shale deposition and biomarkers for photic zone euxinia, suggesting that anoxia played a role in suppressing marine biodiversity. However, global changes in ocean anoxia are difficult to quantify using proxies for local anoxia.

The status of marine biodiversity in the Eastern Central Atlantic (West and Central Africa)

DEFF Research Database (Denmark)

Polidoro, Beth A.; Ralph, Gina M.; Strongin, Kyle

2017-01-01

. This study provides the first comprehensive documentation of the presence, status, and level of extinction risk, based on IUCN Red List assessment methodology, for more than 1800 marine species, including all taxonomically described marine vertebrates (marine mammals, sea turtles, seabirds, fishes); complete...... clades of selected marine invertebrates (sea cucumbers, cone snails, cephalopods, lobsters, reef-building corals); and marine plants (mangroves, seagrasses). Approximately 8% of all marine species assessed in the ECA are in threatened categories, while 4% are listed as Near Threatened, 73% are Least...

Future of African terrestrial biodiversity and ecosystems under anthropogenic climate change

Science.gov (United States)

Midgley, Guy F.; Bond, William J.

2015-09-01

Projections of ecosystem and biodiversity change for Africa under climate change diverge widely. More than other continents, Africa has disturbance-driven ecosystems that diversified under low Neogene CO2 levels, in which flammable fire-dependent C4 grasses suppress trees, and mega-herbivore action alters vegetation significantly. An important consequence is metastability of vegetation state, with rapid vegetation switches occurring, some driven by anthropogenic CO2-stimulated release of trees from disturbance control. These have conflicting implications for biodiversity and carbon sequestration relevant for policymakers and land managers. Biodiversity and ecosystem change projections need to account for both disturbance control and direct climate control of vegetation structure and function.

Ocean zoning for conservation, fisheries and marine renewable energy: assessing trade-offs and co-location opportunities.

Science.gov (United States)

Yates, Katherine L; Schoeman, David S; Klein, Carissa J

2015-04-01

Oceans, particularly coastal areas, are getting busier and within this increasingly human-dominated seascape, marine biodiversity continues to decline. Attempts to maintain and restore marine biodiversity are becoming more spatial, principally through the designation of marine protected areas (MPAs). MPAs compete for space with other uses, and the emergence of new industries, such as marine renewable energy generation, will increase competition for space. Decision makers require guidance on how to zone the ocean to conserve biodiversity, mitigate conflict and accommodate multiple uses. Here we used empirical data and freely available planning software to identified priority areas for multiple ocean zones, which incorporate goals for biodiversity conservation, two types of renewable energy, and three types of fishing. We developed an approached to evaluate trade-offs between industries and we investigated the impacts of co-locating some fishing activities within renewable energy sites. We observed non-linear trade-offs between industries. We also found that different subsectors within those industries experienced very different trade-off curves. Incorporating co-location resulted in significant reductions in cost to the fishing industry, including fisheries that were not co-located. Co-location also altered the optimal location of renewable energy zones with planning solutions. Our findings have broad implications for ocean zoning and marine spatial planning. In particular, they highlight the need to include industry subsectors when assessing trade-offs and they stress the importance of considering co-location opportunities from the outset. Our research reinforces the need for multi-industry ocean-zoning and demonstrates how it can be undertaken within the framework of strategic conservation planning. Copyright © 2015 Elsevier Ltd. All rights reserved.

Marine Reserve Targets to Sustain and Rebuild Unregulated Fisheries.

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Nils C Krueck

2017-01-01

Full Text Available Overfishing threatens the sustainability of coastal marine biodiversity, especially in tropical developing countries. To counter this problem, about 200 governments worldwide have committed to protecting 10%-20% of national coastal marine areas. However, associated impacts on fisheries productivity are unclear and could weaken the food security of hundreds of millions of people who depend on diverse and largely unregulated fishing activities. Here, we present a systematic theoretic analysis of the ability of reserves to rebuild fisheries under such complex conditions, and we identify maximum reserve coverages for biodiversity conservation that do not impair long-term fisheries productivity. Our analysis assumes that fishers have no viable alternative to fishing, such that total fishing effort remains constant (at best. We find that realistic reserve networks, which protect 10%-30% of fished habitats in 1-20 km wide reserves, should benefit the long-term productivity of almost any complex fishery. We discover a "rule of thumb" to safeguard against the long-term catch depletion of particular species: individual reserves should export 30% or more of locally produced larvae to adjacent fishing grounds. Specifically on coral reefs, where fishers tend to overexploit species whose dispersal distances as larvae exceed the home ranges of adults, decisions on the size of reserves needed to meet the 30% larval export rule are unlikely to compromise the protection of resident adults. Even achieving the modest Aichi Target 11 of 10% "effective protection" can then help rebuild depleted catch. However, strictly protecting 20%-30% of fished habitats is unlikely to diminish catch even if overfishing is not yet a problem while providing greater potential for biodiversity conservation and fishery rebuilding if overfishing is substantial. These findings are important because they suggest that doubling or tripling the only globally enforced marine reserve target

Potential Antiviral Agents from Marine Fungi: An Overview

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Soheil Zorofchian Moghadamtousi

2015-07-01

Full Text Available Biodiversity of the marine world is only partially subjected to detailed scientific scrutiny in comparison to terrestrial life. Life in the marine world depends heavily on marine fungi scavenging the oceans of lifeless plants and animals and entering them into the nutrient cycle by. Approximately 150 to 200 new compounds, including alkaloids, sesquiterpenes, polyketides, and aromatic compounds, are identified from marine fungi annually. In recent years, numerous investigations demonstrated the tremendous potential of marine fungi as a promising source to develop new antivirals against different important viruses, including herpes simplex viruses, the human immunodeficiency virus, and the influenza virus. Various genera of marine fungi such as Aspergillus, Penicillium, Cladosporium, and Fusarium were subjected to compound isolation and antiviral studies, which led to an illustration of the strong antiviral activity of a variety of marine fungi-derived compounds. The present review strives to summarize all available knowledge on active compounds isolated from marine fungi with antiviral activity.

Initiatives, prospects, and challenges in tropical marine biosciences in Jagna Bay, Bohol Island, Philippines

Science.gov (United States)

Bernido, Christopher C.; Halasan, Lorenzo C.; Carpio-Bernido, M. Victoria; Saguil, Noel A.; Sadudaquil, Jerome A.; Salas, Rochelle I.; Nayga, Prince Niño I.; Baja, Paz Kenneth S.; Jumawan, Ethel Jade V.

2017-08-01

Marine specimens exhibit diversity in structure as an offshoot of their survival and ecological role in marine communities. The shell structure of gastropods, for example, is so diverse that taxonomic classification could hardly catch up with the myriad specimens many of which remain unidentified, nameless, or worse, unrecorded as large numbers become extinct. As a step towards alleviating the lack of comprehensive marine life assessment, we discuss initial studies conducted in Jagna Bay in the northern part of Bohol Sea to determine the level of biodiversity in this locale. The methods of collecting specimens and their identification are discussed as exemplified by a specimen belonging to the genus Cycloscala. Data collected for specimens whose sizes range from around 1 mm to 250 mm helps establish baseline indicators that could determine ecological balance in this area for monitoring longitudinal effects of climate and human intervention. Given the remarkable marine biodiversity, the perennial challenge is to uncover and learn from the biological structure and functions of many marine specimens for possible applications in different emerging technologies. We illustrate this by citing recent examples where our understanding of marine life inspires innovations for tomorrow's technology.

Geodiversity and biodiversity assessment of the Słupsk Bank, Baltic Sea

Science.gov (United States)

Najwer, Alicja; Zelewska, Izabela; Zwoliński, Zbigniew

2017-04-01

Recognizing the most diversified parts of the territory turns out to be very crucial for management and planning of natural protected areas. There is an increasing number of studies concerning assessing geodiversity and biodiversity of the land areas. However, there is noticeable lack of such publications for submerged zones. The study area consists of 100km2 Słupsk sandy shoal sporadically covered with boulder layers, located in the southern part of the Baltic Sea. It is characterised by landscapes of a significant nature value protected by Natura 2000 and is as well designated as an open sea by Helsinki Commission Baltic Sea Protected Area (HELCOM BSPA). The main aim of the presentation is an attempt to integrate geodiversity and biodiversity assessments of the submerged area using GIS platform. The basis for the diversity assessment is the proper selection of features of the marine environment, its reclassification and integration by the map algebra analysis. The map of geodiversity is based on three factor maps: a relief energy map (classification based on bathymetric model, a landform fragmentation/geomorphological map (expert classification using BPI - Bathymetric Position Index), and a lithological map (classification of the average size of grain fraction). The map of biodiversity is based on the following factor maps: a map of biomass distribution of Ceraminum Diaphanum, a map of biomass distribution of Coccotylus Truncatus, a map of biomass distribution of Polysiphonia Fucoides, a map of biomass distribution of Mytilus Edulis Trossulus, a map of distribution of macroalgae, and finally a map of distribution of macrozoobenthos. It was decided to use four classes of diversity (from low through medium and high, up to very high). The designation of the lowest class was abandoned because it characterizes areas with high anthropopressure. Maps of geodiversity and biodiversity may prove to be helpful in determining the directions for management of the most

Consumer Preferences Toward Marine Tourism Area

Directory of Open Access Journals (Sweden)

Silvy Fauziah

2012-09-01

Full Text Available The marine zone tourism is growing attracting more tourists. Pramuka Island is marine conservation area enriched with marine biodiversity in coral reefs and other natural resources. To develop this potential tourist destination, a customer-based marketing program is required to attract domestic and foreign tourists. The main vision is to understand tourist preferences for marine tourism activities and facilities. A research was conducted on Pramuka Island as a well-known marine tourism zone. The objective was to determine the key tourist preferences for marine tourism destination. Research methods utilized Cochran Q test and Conjoint analysis where the primary data were obtained from tourist respondents. The result showed that there was a tourist preference based on the five attributes considered most important, namely tourism activities, tourist attractions, types of accommodation, food and souvenirs types. This study provided marine tourism destination management with useful guidance for broader implications of the implementation of marketing programs and tourism attraction. Moreover, the results of this study consolidated the learning of a variety of academic and industrial research papers in particular for the measurement of customer preferences towards marine tourism destination.

The Sustainable Use and Conservation of Biodiversity in ABNJ: What can be achieved using existing international agreements?

NARCIS (Netherlands)

Rayfuse, R.; Ardron, J.; Warner, R.; Gjerde, K.

2014-01-01

While the international community debates the desirability and possible content of a new global instrument for the conservation and sustainable use of marine biodiversity in areas beyond national jurisdiction, alternative approaches to improving the application and implementation of existing

Identification and protection of terrestrial global biodiversity hotspots: progress and challenges

OpenAIRE

Roy, Arijit

2016-01-01

Arijit Roy Forestry and Ecology Department, Indian Institute of Remote Sensing, Dehradun, India Abstract: Due to ever-increasing demand on the natural resources, earth is on the verge of a global mass extinction. The biodiversity hotspots are the remnant natural areas of high terrestrial biodiversity which are rapidly degrading and constitute more than half of the global endemic species in approximately 2% of the global land area which requires conservation and protection along with effort t...

The Gauteng Conservation Plan: Planning for biodiversity in a rapidly urbanising province

Directory of Open Access Journals (Sweden)

Michèle F. Pfab

2017-11-01

Conclusion: The existing protected area network is inadequate for the conservation of biodiversity in Gauteng. The Gauteng Conservation Plan identifies a set of areas that are required to achieve conservation targets. It is important that identified areas currently not in the protected area network are protected either formally or through legislated land use management processes.

Working in networks to make biodiversity data more available

CSIR Research Space (South Africa)

Scholes, RJ

2017-01-01

Full Text Available mandates, resources and management—has risen to prominence as a way of organising many activities in the modern era. A cynic might say this is because the world has lost the appetite for creating and funding new institutions or that networking is a way... more equitable management Trends in representative coverage of protected areas and other area based approaches, including sites of particular importance for biodiversity, and of terrestrial, marine and inland water systems Trends in the delivery...

Limitations of habitats as biodiversity surrogates for conservation planning in estuaries.

Science.gov (United States)

Shokri, Mohammad Reza; Gladstone, William

2013-04-01

Increasing pressures on global biodiversity and lack of data on the number and abundance of species have motivated conservation planners and researchers to use more readily available information as proxies or surrogates for biodiversity. "Habitat" is one of the most frequently used surrogates but its assumed value in marine conservation planning is not often tested. The present study developed and tested three alternative habitat classification schemes of increasing complexity for a large estuary in south-east Australia and tested their effectiveness in predicting spatial variation in macroinvertebrate biodiversity and selecting estuarine protected areas to represent species. The three habitat classification schemes were: (1) broad-scale habitats (e.g., mangroves and seagrass), (2) subdivision of each broad-scale habitat by a suite of environmental variables that varied significantly throughout the estuary, and (3) subdivision of each broad-scale habitat by the subset of environmental variables that best explained spatial variation in macroinvertebrate biodiversity. Macroinvertebrate assemblages differed significantly among the habitats in each classification scheme. For each classification scheme, habitat richness was significantly correlated with species richness, total density of macroinvertebrates, assemblage dissimilarity, and summed irreplaceability. However, in a reserve selection process designed to represent examples of each habitat, no habitat classification scheme represented species significantly better than a random selection of sites. Habitat classification schemes may represent variation in estuarine biodiversity; however, the results of this study suggest they are inefficient in designing representative networks of estuarine protected areas.

Toward a Virtual Laboratory to Assess Biodiversity from Data Produced by an Underwater Microscope

Science.gov (United States)

Beaulieu, S.; Ball, M.; Futrelle, J.; Sosik, H. M.

2016-12-01

Real-time data from sensors deployed in the ocean are increasingly available online for broad use by scientists, educators, and the public. Such data have previously been limited to physical parameters, but data for biological parameters are becoming more prevalent with the development of new submersible instruments. Imaging FlowCytobot (IFCB), for example, automatically and rapidly acquires images of microscopic algae (phytoplankton) at the base of the food web in marine ecosystems. These images and products from image processing and automated classification are accessible via web services from an IFCB dashboard. However, until now, to process these data further into results representing the biodiversity of the phytoplankton required a complex workflow that could only be executed by scientists involved in the instrument development. Also, because these data have been collected near continuously for a decade, a number of "big data" challenges arise in attempting to implement and reproduce the workflow. Our research is geared toward the development of a virtual laboratory to enable other scientists and educators, as new users of data from this underwater microscope, to generate biodiversity data products. Our solution involves an electronic notebook (Jupyter Notebook) that can be re-purposed by users with some Python programming experience. However, when we scaled the virtual laboratory to accommodate a 2-month example time series (thousands of binned files each representing thousands of images), we needed to expand the execution environment to include batch processing outside of the notebook. We will share how we packaged these tools to share with other scientists to perform their own biodiversity assessment from data available on an IFCB dashboard. Additional outcomes of software development in this project include a prototype for time-series visualizations to be generated in near-real-time and recommendations for new products accessible via web services from the

'Conservationists' and the 'Local People' in Biodiversity Conservation

African Journals Online (AJOL)

Studies on biodiversity in Africa show its rapid loss and degradation. This is commonly explained with non-sustainable use by local people. Across Africa, extensive systems of protected areas (PAs) have been established to mitigate this trend. Creation of PAs, however, resulted in manifold conflicts with people who depend ...

New Mediterranean Marine biodiversity records (December, 2013

Directory of Open Access Journals (Sweden)

M. BILECENOGLU

2013-10-01

Full Text Available Based on recent biodiversity studies carried out in different parts of the Mediterranean, the following 19 species are included as new records on the floral or faunal lists of the relevant ecosystems: the green algae Penicillus capitatus (Maltese waters; the nemertean Amphiporus allucens (Iberian Peninsula, Spain; the salp Salpa maxima (Syria; the opistobranchs Felimida britoi and Berghia coerulescens (Aegean Sea, Greece; the dusky shark Carcharhinus obscurus (central-west Mediterranean and Ionian Sea, Italy; Randall’s threadfin bream Nemipterus randalli, the broadbanded cardinalfish Apogon fasciatus and the goby Gobius kolombatovici (Aegean Sea, Turkey; the reticulated leatherjack Stephanolepis diaspros and the halacarid Agaue chevreuxi (Sea of Marmara, Turkey; the slimy liagora Ganonema farinosum, the yellowstripe barracuda Sphyraena chrysotaenia, the rayed pearl oyster Pinctada imbricata radiata and the Persian conch Conomurex persicus (south-eastern Crete, Greece; the blenny Microlipophrys dalmatinus and the bastard grunt Pomadasys incisus (Ionian Sea, Italy; the brown shrimp Farfantepenaeus aztecus (north-eastern Levant, Turkey; the blue-crab Callinectes sapidus (Corfu, Ionian Sea, Greece. In addition, the findings of the following rare species improve currently available biogeographical knowledge: the oceanic pufferfish Lagocephalus lagocephalus (Malta; the yellow sea chub Kyphosus incisor (Almuñécar coast of Spain; the basking shark Cetorhinus maximus and the shortfin mako Isurus oxyrinchus (north-eastern Levant, Turkey.

Marine Bacterial Genomics

DEFF Research Database (Denmark)

Machado, Henrique

For decades, terrestrial microorganisms have been used as sources of countless enzymes and chemical compounds that have been produced by pharmaceutical and biotech companies and used by mankind. There is a need for new chemical compounds, including antibiotics,new enzymatic activities and new...... microorganisms to be used as cell factories for production. Therefore exploitation of new microbial niches and use of different strategies is an opportunity to boost discoveries. Even though scientists have started to explore several habitats other than the terrestrial ones, the marine environment stands out...... as a hitherto under-explored niche. This thesis work uses high-throughput sequencing technologies on a collection of marine bacteria established during the Galathea 3 expedition, with the purpose of unraveling new biodiversity and new bioactivities. Several tools were used for genomic analysis in order...

Construction and Screening of Marine Metagenomic Large Insert Libraries.

Science.gov (United States)

Weiland-Bräuer, Nancy; Langfeldt, Daniela; Schmitz, Ruth A

2017-01-01

The marine environment covers more than 70 % of the world's surface. Marine microbial communities are highly diverse and have evolved during extended evolutionary processes of physiological adaptations under the influence of a variety of ecological conditions and selection pressures. They harbor an enormous diversity of microbes with still unknown and probably new physiological characteristics. In the past, marine microbes, mostly bacteria of microbial consortia attached to marine tissues of multicellular organisms, have proven to be a rich source of highly potent bioactive compounds, which represent a considerable number of drug candidates. However, to date, the biodiversity of marine microbes and the versatility of their bioactive compounds and metabolites have not been fully explored. This chapter describes sampling in the marine environment, construction of metagenomic large insert libraries from marine habitats, and exemplarily one function based screen of metagenomic clones for identification of quorum quenching activities.

Effect of a Jurassic oceanic anoxic event on belemnite ecology and evolution

DEFF Research Database (Denmark)

Ullmann, Clemens Vinzenz; Thibault, Nicolas Rudolph; Ruhl, Micha

2014-01-01

The Toarcian oceanic anoxic event (T-OAE; ∼183 million y ago) is possibly the most extreme episode of widespread ocean oxygen deficiency in the Phanerozoic, coinciding with rapid atmospheric pCO2 increase and significant loss of biodiversity in marine faunas. The event is a unique past tipping...... point in the Earth system, where rapid and massive release of isotopically light carbon led to a major perturbation in the global carbon cycle as recorded in organic and inorganic C isotope records. Modern marine ecosystems are projected to experience major loss in biodiversity in response to enhanced...

Averting biodiversity collapse in tropical forest protected areas

Science.gov (United States)

W.F. Laurance; D.C. Useche; J. Rendeiro; and others NO-VALUE; Ariel Lugo

2012-01-01

The rapid disruption of tropical forests probably imperils global biodiversity more than any other contemporary phenomenon1–3. With deforestation advancing quickly, protected areas are increasingly becoming final refuges for threatened species and natural ecosystem processes. However, many protected areas in the tropics are themselves vulnerable to human encroachment...

Leatherback sea turtle stewardship to attain local, regional, and global marine conservation and management

Science.gov (United States)

Randall Arauz; Todd Steiner

2007-01-01

The leatherback sea turtle (Dermochelys coriacea) is the largest marine reptile with one of the longest known ocean migrations in the world and an important part of marine biodiversity. It is also important to the economies of coastal communities in developing countries, especially in areas where eco-tourism has replaced unsustainable harvest and...

Forecasted coral reef decline in marine biodiversity hotspots under climate change.

Science.gov (United States)

Descombes, Patrice; Wisz, Mary S; Leprieur, Fabien; Parravicini, Valerianio; Heine, Christian; Olsen, Steffen M; Swingedouw, Didier; Kulbicki, Michel; Mouillot, David; Pellissier, Loïc

2015-01-21

Coral bleaching events threaten coral reef habitats globally and cause severe declines of local biodiversity and productivity. Related to high sea surface temperatures (SST), bleaching events are expected to increase as a consequence of future global warming. However, response to climate change is still uncertain as future low-latitude climatic conditions have no present-day analogue. Sea surface temperatures during the Eocene epoch were warmer than forecasted changes for the coming century, and distributions of corals during the Eocene may help to inform models forecasting the future of coral reefs. We coupled contemporary and Eocene coral occurrences with information on their respective climatic conditions to model the thermal niche of coral reefs and its potential response to projected climate change. We found that under the RCP8.5 climate change scenario, the global suitability for coral reefs may increase up to 16% by 2100, mostly due to improved suitability of higher latitudes. In contrast, in its current range, coral reef suitability may decrease up to 46% by 2100. Reduction in thermal suitability will be most severe in biodiversity hotspots, especially in the Indo-Australian Archipelago. Our results suggest that many contemporary hotspots for coral reefs, including those that have been refugia in the past, spatially mismatch with future suitable areas for coral reefs posing challenges to conservation actions under climate change. © 2015 John Wiley & Sons Ltd.

European mountain biodiversity

Directory of Open Access Journals (Sweden)

Nagy, Jennifer

1998-12-01

changements climatiques et la pollution de l'air dominés par des interactions environnementales. Le chapitre sur la biogéographie souligne l'importance de l'altitude et la latitude sur la biodiversité. Les implications des différentes échelles sur les différents niveaux de biodiversité et à travers les groupes d'organismes sont soulignés comme caractéristique complexe de la biodiversité. La discussion sur l'écologie fonctionnelle et la régulation de la biodiversité porte sur le rôle des facteurs de l'ambiance, la productivité, la perturbation, la migration des espèces et leur dispersion, enfin les interactions entre espècessur la maintenance de la biodiversité. On discute également les modèles régionaux et les séries temporelles à long terme. On passe rapidement sur les écosystèmes aquatiques de montagne avant de finir sur les conséquences du changement climatique récent et de la pollution dé l'air sur la biodiversité des montagnes. [es] Con este trabajo, originalmente preparado como base de discusión para la reunión organizada por la ESF bajo el título «Trends in European Mountain Biodiversity-Research Planning Workshop», damos una panorámica sobre las investigaciones actuales sobre biodiversidad en las zonas de montaña de Europa. Tratamos los siguientes aspectos, (a rasgos biogeográficos, (b características generales de la biodiversidad, (c factores ambientales y regulación de la biodiversidad en relación con la función de los ecosistemas, (d resultados de los estudios sobre ecosistemas acuáticos en montaña, y (e cambio climático y contaminación ambiental dominados por interacciones ambientales. Al hablar de los rasgos biogeográficos destacamos la importancia de la altitud y la latitud en la biodiversidad. Los problemas de escala y su implicación en los diferentes niveles de biodiversidad y en los diversos grupos de organismos se consideran como una característica compleja inherente a la biodiversidad. Desde un punto de

Coherent assessments of Europe’s marine fishes show regional divergence and megafauna loss

OpenAIRE

FERNANDES PAUL; RALPH GINA; NIETO ANA; GARCIA CRIADO MARIANA; VASILAKOPOULOS PARASKEVAS; MARAVELIAS CHRISTOS; COOK ROBIN; POLLOM RILEY; KOVACIC MARCELO; POLLARD DAVID; FARRELL EDWARD; FLORIN ANN-BRITT; POLIDORO BETH; LAWSON JULIA; LORANCE PASCAL

2017-01-01

Europe has a long tradition of exploiting marine fishes and is promoting marine economic activity through its Blue Growth strategy. This increase in anthropogenic pressure, along with climate change, threatens the biodiversity of fishes and food security. Here, we examine the conservation status of 1,020 species of European marine fishes and identify factors that contribute to their extinction risk. Large fish species (greater than 1.5 m total length) are most at risk; half of these are threa...

The role of citzens in detecting and responding to a rapid marine invasion

Science.gov (United States)

Scyphers, Stephen B.; Powers, Sean P.; Akins, J. Lad; Drymon, J. Marcus; Martin, Charles M.; Schobernd, Zeb H.; Schofield, Pamela J.; Shipp, Robert L.; Switzer, Theodore S.

2015-01-01

Documenting and responding to species invasions requires innovative strategies that account for ecological and societal complexities. We used the recent expansion of Indo-Pacific lionfish (Pterois volitans/miles) throughout northern Gulf of Mexico coastal waters to evaluate the role of stakeholders in documenting and responding to a rapid marine invasion. We coupled an online survey of spearfishers and citizen science monitoring programs with traditional fishery-independent data sources and found that citizen observations documented lionfish 1–2 years earlier and more frequently than traditional reef fish monitoring programs. Citizen observations first documented lionfish in 2010 followed by rapid expansion and proliferation in 2011 (+367%). From the survey of spearfishers, we determined that diving experience and personal observations of lionfish strongly influenced perceived impacts, and these perceptions were powerful predictors of support for initiatives. Our study demonstrates the value of engaging citizens for assessing and responding to large-scale and time-sensitive conservation problems.

Rapid cycling of reactive nitrogen in the marine boundary layer.

Science.gov (United States)

Ye, Chunxiang; Zhou, Xianliang; Pu, Dennis; Stutz, Jochen; Festa, James; Spolaor, Max; Tsai, Catalina; Cantrell, Christopher; Mauldin, Roy L; Campos, Teresa; Weinheimer, Andrew; Hornbrook, Rebecca S; Apel, Eric C; Guenther, Alex; Kaser, Lisa; Yuan, Bin; Karl, Thomas; Haggerty, Julie; Hall, Samuel; Ullmann, Kirk; Smith, James N; Ortega, John; Knote, Christoph

2016-04-28

Nitrogen oxides are essential for the formation of secondary atmospheric aerosols and of atmospheric oxidants such as ozone and the hydroxyl radical, which controls the self-cleansing capacity of the atmosphere. Nitric acid, a major oxidation product of nitrogen oxides, has traditionally been considered to be a permanent sink of nitrogen oxides. However, model studies predict higher ratios of nitric acid to nitrogen oxides in the troposphere than are observed. A 'renoxification' process that recycles nitric acid into nitrogen oxides has been proposed to reconcile observations with model studies, but the mechanisms responsible for this process remain uncertain. Here we present data from an aircraft measurement campaign over the North Atlantic Ocean and find evidence for rapid recycling of nitric acid to nitrous acid and nitrogen oxides in the clean marine boundary layer via particulate nitrate photolysis. Laboratory experiments further demonstrate the photolysis of particulate nitrate collected on filters at a rate more than two orders of magnitude greater than that of gaseous nitric acid, with nitrous acid as the main product. Box model calculations based on the Master Chemical Mechanism suggest that particulate nitrate photolysis mainly sustains the observed levels of nitrous acid and nitrogen oxides at midday under typical marine boundary layer conditions. Given that oceans account for more than 70 per cent of Earth's surface, we propose that particulate nitrate photolysis could be a substantial tropospheric nitrogen oxide source. Recycling of nitrogen oxides in remote oceanic regions with minimal direct nitrogen oxide emissions could increase the formation of tropospheric oxidants and secondary atmospheric aerosols on a global scale.

Bioprospecting Marine Plankton

Directory of Open Access Journals (Sweden)

Chris Bowler

2013-11-01

Full Text Available The ocean dominates the surface of our planet and plays a major role in regulating the biosphere. For example, the microscopic photosynthetic organisms living within provide 50% of the oxygen we breathe, and much of our food and mineral resources are extracted from the ocean. In a time of ecological crisis and major changes in our society, it is essential to turn our attention towards the sea to find additional solutions for a sustainable future. Remarkably, while we are overexploiting many marine resources, particularly the fisheries, the planktonic compartment composed of zooplankton, phytoplankton, bacteria and viruses, represents 95% of marine biomass and yet the extent of its diversity remains largely unknown and underexploited. Consequently, the potential of plankton as a bioresource for humanity is largely untapped. Due to their diverse evolutionary backgrounds, planktonic organisms offer immense opportunities: new resources for medicine, cosmetics and food, renewable energy, and long-term solutions to mitigate climate change. Research programs aiming to exploit culture collections of marine micro-organisms as well as to prospect the huge resources of marine planktonic biodiversity in the oceans are now underway, and several bioactive extracts and purified compounds have already been identified. This review will survey and assess the current state-of-the-art and will propose methodologies to better exploit the potential of marine plankton for drug discovery and for dermocosmetics.

Scaling-up camera traps: monitoring the planet's biodiversity with networks of remote sensors

Science.gov (United States)

Steenweg, Robin; Hebblewhite, Mark; Kays, Roland; Ahumada, Jorge A.; Fisher, Jason T.; Burton, Cole; Townsend, Susan E.; Carbone, Chris; Rowcliffe, J. Marcus; Whittington, Jesse; Brodie, Jedediah; Royle, Andy; Switalski, Adam; Clevenger, Anthony P.; Heim, Nicole; Rich, Lindsey N.

2017-01-01

Countries committed to implementing the Convention on Biological Diversity's 2011–2020 strategic plan need effective tools to monitor global trends in biodiversity. Remote cameras are a rapidly growing technology that has great potential to transform global monitoring for terrestrial biodiversity and can be an important contributor to the call for measuring Essential Biodiversity Variables. Recent advances in camera technology and methods enable researchers to estimate changes in abundance and distribution for entire communities of animals and to identify global drivers of biodiversity trends. We suggest that interconnected networks of remote cameras will soon monitor biodiversity at a global scale, help answer pressing ecological questions, and guide conservation policy. This global network will require greater collaboration among remote-camera studies and citizen scientists, including standardized metadata, shared protocols, and security measures to protect records about sensitive species. With modest investment in infrastructure, and continued innovation, synthesis, and collaboration, we envision a global network of remote cameras that not only provides real-time biodiversity data but also serves to connect people with nature.

Business and biodiversity

DEFF Research Database (Denmark)

Andersen, Rasmus Meyer; Lehmann, Martin; Christensen, Per

Despite the overall importance of biodiversity, the quality measures of biodiversity show worrying figures. Numerous human impacts on nature impose serious hazard to its inherent diversity. This expansion of human activities leaves the battle against loss of biodiversity to be a great challenge......, but the effort has until now considered biodiversity actions relatively little, compared to other areas such as e.g. climate related actions. Nevertheless, the opportunity for businesses to meet their responsibilities and lift a share of the challenge is far from being just a romantic thought. Nor...... is the challenge of engaging businesses in responsible actions. The core challenge is to create awareness of the environmental phenomenon biodiversity, inform about the significance of business involvement, and encourage the business world to participate in this process of protecting biodiversity as the valuable...

Developing wind energy in Ireland - consequences for our biodiversity and ecosystem services

Energy Technology Data Exchange (ETDEWEB)

Bourke, David; Stout, Jane

2011-07-01

Full text: In response to climate change, the EU has set a target to achieve 20% of energy from renewable sources by 2020 (Directive 2009/28/EC). Consequently, Ireland has set targets of 40, 10 and 12% of energy coming from renewable sources for electricity, transport and heat, respectively, by 2020. Wind energy is expected to contribute significantly to achieving these targets given Ireland.s large onshore and offshore wind potential. However, the potential impacts of these wind farm developments on Ireland.s biodiversity remain largely un quantified. The SIMBIOSYS (www.SIMBIOSYS.ie) project was set up to investigate the impacts of a range of sectors on biodiversity and ecosystem services, with part of the project.s focus on those measures that may help mitigate the effects of climate change. In this paper we aim to assess the potential positive and negative impacts of wind farms on Ireland.s marine and terrestrial biodiversity, highlighting potential conflicts concerning the spatial distribution of our wind and biodiversity resources. To help make these assessments an extensive review of the national and international scientific literature is used to highlight the potential positive and negative impacts of wind farm developments on biodiversity to date. Using GIS, spatial analyses are then used to quantify the extent to which wind resources and current and future wind farm developments overlap with biodiversity, using indicators such as Natura 2000 sites and Red Data List Plants. The outputs of these analyses are combined to help make recommendations on the sustainable future planning and management of wind farms in Ireland. Appropriate impact assessment and careful spatial planning will help ensure the direct benefits of green house gas emission reduction are maximised without compromising the protection of biodiversity in Ireland. (Author)

Foreword to the thematic cluster: the Arctic in Rapid Transition—marine ecosystems

Directory of Open Access Journals (Sweden)

Monika Kędra

2015-12-01

Full Text Available The Arctic is warming and losing sea ice. Happening at a much faster rate than previously expected, these changes are causing multiple ecosystem feedbacks in the Arctic Ocean. The Arctic in Rapid Transition (ART initiative was developed by early-career scientists as an integrative, international, multidisciplinary, long-term pan-Arctic network to study changes and feedbacks among the physical and biogeochemical components of the Arctic Ocean and their ultimate impacts on biological productivity on different timescales. In 2012, ART jointly organized with the Association of Polar Early Career Scientists their second science workshop—Overcoming Challenges of Observation to Model Integration in Marine Ecosystem Response to Sea Ice Transitions—at the Institute of Oceanology, Polish Academy of Sciences, in Sopot. This workshop aimed to identify linkages and feedbacks between atmosphere–ice–ocean forcing and biogeochemical processes, which are critical for ecosystem function, land–ocean interactions and productive capacity of the Arctic Ocean. This special thematic cluster of Polar Research brings together seven papers that grew out of workgroup discussions. Papers examine the climate change impacts on various ecosystem elements, providing important insights on the marine ecological and biogeochemical processes on various timescales. They also highlight priority areas for future research.

Exploring the antibacterial and anticancer potential of five marine fungi. With the use of OSMAC-approach

OpenAIRE

Bragmo, Hanne

2017-01-01

The marine environment is an untapped source for biodiversity and has a great potential to provide the drugs of the future. Antibiotic resistance is an increasing threat worldwide and the need for discovering new antibacterial compounds is urgent. Marine microorganisms produce a wide range of bioactive compounds, and marine fungi have only been exploited to a small extent. This creates a great potential for finding novel antibacterial compounds in marine fungi. In this study, the antibac...

High-throughput biodiversity analysis: Rapid assessment of species richness and ecological interactions of Chrysomelidae (Coleoptera) in the tropics.

Science.gov (United States)

Gómez-Zurita, Jesús; Cardoso, Anabela; Coronado, Indiana; De la Cadena, Gissela; Jurado-Rivera, José A; Maes, Jean-Michel; Montelongo, Tinguaro; Nguyen, Dinh Thi; Papadopoulou, Anna

2016-01-01

Biodiversity assessment has been the focus of intense debate and conceptual and methodological advances in recent years. The cultural, academic and aesthetic impulses to recognise and catalogue the diversity in our surroundings, in this case of living objects, is furthermore propelled by the urgency of understanding that we may be responsible for a dramatic reduction of biodiversity, comparable in magnitude to geological mass extinctions. One of the most important advances in this attempt to characterise biodiversity has been incorporating DNA-based characters and molecular taxonomy tools to achieve faster and more efficient species delimitation and identification, even in hyperdiverse tropical biomes. In this assay we advocate for a broad understanding of Biodiversity as the inventory of species in a given environment, but also the diversity of their interactions, with both aspects being attainable using molecular markers and phylogenetic approaches. We exemplify the suitability and utility of this framework for large-scale biodiversity assessment with the results of our ongoing projects trying to characterise the communities of leaf beetles and their host plants in several tropical setups. Moreover, we propose that approaches similar to ours, establishing the inventories of two ecologically inter-related and species-rich groups of organisms, such as insect herbivores and their angiosperm host-plants, can serve as the foundational stone to anchor a comprehensive assessment of diversity, also in tropical environments, by subsequent addition of trophic levels.

Unveiling the Biodiversity of Deep-Sea Nematodes through Metabarcoding: Are We Ready to Bypass the Classical Taxonomy?

Science.gov (United States)

Dell'Anno, Antonio; Carugati, Laura; Corinaldesi, Cinzia; Riccioni, Giulia; Danovaro, Roberto

2015-01-01

Nematodes inhabiting benthic deep-sea ecosystems account for >90% of the total metazoan abundances and they have been hypothesised to be hyper-diverse, but their biodiversity is still largely unknown. Metabarcoding could facilitate the census of biodiversity, especially for those tiny metazoans for which morphological identification is difficult. We compared, for the first time, different DNA extraction procedures based on the use of two commercial kits and a previously published laboratory protocol and tested their suitability for sequencing analyses of 18S rDNA of marine nematodes. We also investigated the reliability of Roche 454 sequencing analyses for assessing the biodiversity of deep-sea nematode assemblages previously morphologically identified. Finally, intra-genomic variation in 18S rRNA gene repeats was investigated by Illumina MiSeq in different deep-sea nematode morphospecies to assess the influence of polymorphisms on nematode biodiversity estimates. Our results indicate that the two commercial kits should be preferred for the molecular analysis of biodiversity of deep-sea nematodes since they consistently provide amplifiable DNA suitable for sequencing. We report that the morphological identification of deep-sea nematodes matches the results obtained by metabarcoding analysis only at the order-family level and that a large portion of Operational Clustered Taxonomic Units (OCTUs) was not assigned. We also show that independently from the cut-off criteria and bioinformatic pipelines used, the number of OCTUs largely exceeds the number of individuals and that 18S rRNA gene of different morpho-species of nematodes displayed intra-genomic polymorphisms. Our results indicate that metabarcoding is an important tool to explore the diversity of deep-sea nematodes, but still fails in identifying most of the species due to limited number of sequences deposited in the public databases, and in providing quantitative data on the species encountered. These aspects

Biodiversity mapping in sensitive areas

Energy Technology Data Exchange (ETDEWEB)

Jensen, Tor; Ulssnes, Amund; Nissen-Lie, Torild [DNV, Oslo (Norway)

2008-07-01

When oil companies are entering new unexplored areas their potential footprint on the environment should be measured in a way that necessary action could be included in the planning of the activity. These actions should reduce the impact to accepted levels. Traditional baseline studies, including sediment and macro fauna sampling, are carried out in homogeneous areas. In heterogeneous and unexplored areas there is a need for more information than these traditional sediment analyses can give. To increase the knowledge from specific areas biodiversity mapping has been carried out. To combine the knowledge from ROV surveys, modelling, current measurements, sediment characteristics, seismic, macro fauna and background levels of chemicals contents in the sediments, both prior to the exploration, and after the drilling have taken place the operator can document their footprint on the marine environment. (author)

Using marine reserves to manage impact of bottom trawl fisheries requires consideration of benthic food-web interactions

DEFF Research Database (Denmark)

van Denderen, Pieter Daniël; Rijnsdorp, Adriaan D.; van Kooten, Tobias

2016-01-01

Marine protected areas (MPAs) are widely used to protect exploited fish species as well as to conserve marine habitats and their biodiversity. They have become a popular management tool also for bottom trawl fisheries, a common fishing technique on continental shelves worldwide. The effects of bo...

Linking benthic biodiversity to the functioning of coastal ecosystems subjected to river runoff (NW Mediterranean

Directory of Open Access Journals (Sweden)

Harmelin–Vivien, M. L.

2009-12-01

Full Text Available Continental particulate organic matter (POM plays a major role in the functioning of coastal marine ecosystems as a disturbance as well as an input of nutrients. Relationships linking continental inputs from the Rhone River to biodiversity of the coastal benthic ecosystem and fishery production were investigated in the Golfe du Lion (NW Mediterranean Sea. Macrobenthic community diversity decreased when continen¬tal inputs of organic matter increased, whereas ecosystem production, measured by common sole (Solea solea fishery yields in the area, increased. Decreases in macrobenthic diversity were mainly related to an increasing abundance of species with specific functional traits, particularly deposit-feeding polychaetes. The decrease in macrobenthic diversity did not result in a decrease, but an increase in ecosystem production, as it enhanced the transfer of continental POM into marine food webs. The present study showed that it is necessary to consider functional traits of species, direct and indirect links between species, and feedback loops to understand the effects of biodiversity on ecosystem functioning and productivity.

Understanding local-scale drivers of biodiversity outcomes in terrestrial protected areas.

Science.gov (United States)

Barnes, Megan D; Craigie, Ian D; Dudley, Nigel; Hockings, Marc

2017-07-01

Conservation relies heavily on protected areas (PAs) maintaining their key biodiversity features to meet global biodiversity conservation goals. However, PAs have had variable success, with many failing to fully maintain their biodiversity features. The current literature concerning what drives variability in PA performance is rapidly expanding but unclear, sometimes contradictory, and spread across multiple disciplines. A clear understanding of the drivers of successful biodiversity conservation in PAs is necessary to make them fully effective. Here, we conduct a comprehensive assessment of the current state of knowledge concerning the drivers of biological outcomes within PAs, focusing on those that can be addressed at local scales. We evaluate evidence in support of potential drivers to identify those that enable more successful outcomes and those that impede success and provide a synthetic review. Interactions are discussed where they are known, and we highlight gaps in understanding. We find that elements of PA design, management, and local and national governance challenges, species and system ecology, and sociopolitical context can all influence outcomes. Adjusting PA management to focus on actions and policies that influence the key drivers identified here could improve global biodiversity outcomes. © 2016 New York Academy of Sciences.

Rapid, long-distance dispersal by pumice rafting.

Directory of Open Access Journals (Sweden)

Scott E Bryan

Full Text Available Pumice is an extremely effective rafting agent that can dramatically increase the dispersal range of a variety of marine organisms and connect isolated shallow marine and coastal ecosystems. Here we report on a significant recent pumice rafting and long-distance dispersal event that occurred across the southwest Pacific following the 2006 explosive eruption of Home Reef Volcano in Tonga. We have constrained the trajectory, and rate, biomass and biodiversity of transfer, discovering more than 80 species and a substantial biomass underwent a >5000 km journey in 7-8 months. Differing microenvironmental conditions on the pumice, caused by relative stability of clasts at the sea surface, promoted diversity in biotic recruitment. Our findings emphasise pumice rafting as an important process facilitating the distribution of marine life, which have implications for colonisation processes and success, the management of sensitive marine environments, and invasive pest species.

Mobilizing and integrating big data in studies of spatial and phylogenetic patterns of biodiversity

Directory of Open Access Journals (Sweden)

Douglas E. Soltis

2016-12-01

Full Text Available The current global challenges that threaten biodiversity are immense and rapidly growing. These biodiversity challenges demand approaches that meld bioinformatics, large-scale phylogeny reconstruction, use of digitized specimen data, and complex post-tree analyses (e.g. niche modeling, niche diversification, and other ecological analyses. Recent developments in phylogenetics coupled with emerging cyberinfrastructure and new data sources provide unparalleled opportunities for mobilizing and integrating massive amounts of biological data, driving the discovery of complex patterns and new hypotheses for further study. These developments are not trivial in that biodiversity data on the global scale now being collected and analyzed are inherently complex. The ongoing integration and maturation of biodiversity tools discussed here is transforming biodiversity science, enabling what we broadly term “next-generation” investigations in systematics, ecology, and evolution (i.e., “biodiversity science”. New training that integrates domain knowledge in biodiversity and data science skills is also needed to accelerate research in these areas. Integrative biodiversity science is crucial to the future of global biodiversity. We cannot simply react to continued threats to biodiversity, but via the use of an integrative, multifaceted, big data approach, researchers can now make biodiversity projections to provide crucial data not only for scientists, but also for the public, land managers, policy makers, urban planners, and agriculture.

Large-scale assessment of benthic communities across multiple marine protected areas using an autonomous underwater vehicle.

Science.gov (United States)

Ferrari, Renata; Marzinelli, Ezequiel M; Ayroza, Camila Rezende; Jordan, Alan; Figueira, Will F; Byrne, Maria; Malcolm, Hamish A; Williams, Stefan B; Steinberg, Peter D

2018-01-01

Marine protected areas (MPAs) are designed to reduce threats to biodiversity and ecosystem functioning from anthropogenic activities. Assessment of MPAs effectiveness requires synchronous sampling of protected and non-protected areas at multiple spatial and temporal scales. We used an autonomous underwater vehicle to map benthic communities in replicate 'no-take' and 'general-use' (fishing allowed) zones within three MPAs along 7o of latitude. We recorded 92 taxa and 38 morpho-groups across three large MPAs. We found that important habitat-forming biota (e.g. massive sponges) were more prevalent and abundant in no-take zones, while short ephemeral algae were more abundant in general-use zones, suggesting potential short-term effects of zoning (5-10 years). Yet, short-term effects of zoning were not detected at the community level (community structure or composition), while community structure varied significantly among MPAs. We conclude that by allowing rapid, simultaneous assessments at multiple spatial scales, autonomous underwater vehicles are useful to document changes in marine communities and identify adequate scales to manage them. This study advanced knowledge of marine benthic communities and their conservation in three ways. First, we quantified benthic biodiversity and abundance, generating the first baseline of these benthic communities against which the effectiveness of three large MPAs can be assessed. Second, we identified the taxonomic resolution necessary to assess both short and long-term effects of MPAs, concluding that coarse taxonomic resolution is sufficient given that analyses of community structure at different taxonomic levels were generally consistent. Yet, observed differences were taxa-specific and may have not been evident using our broader taxonomic classifications, a classification of mid to high taxonomic resolution may be necessary to determine zoning effects on key taxa. Third, we provide an example of statistical analyses and

High-throughput biodiversity analysis: Rapid assessment of species richness and ecological interactions of Chrysomelidae (Coleoptera) in the tropics

Science.gov (United States)

Gómez-Zurita, Jesús; Cardoso, Anabela; Coronado, Indiana; De la Cadena, Gissela; Jurado-Rivera, José A.; Maes, Jean-Michel; Montelongo, Tinguaro; Nguyen, Dinh Thi; Papadopoulou, Anna

2016-01-01

Abstract Biodiversity assessment has been the focus of intense debate and conceptual and methodological advances in recent years. The cultural, academic and aesthetic impulses to recognise and catalogue the diversity in our surroundings, in this case of living objects, is furthermore propelled by the urgency of understanding that we may be responsible for a dramatic reduction of biodiversity, comparable in magnitude to geological mass extinctions. One of the most important advances in this attempt to characterise biodiversity has been incorporating DNA-based characters and molecular taxonomy tools to achieve faster and more efficient species delimitation and identification, even in hyperdiverse tropical biomes. In this assay we advocate for a broad understanding of Biodiversity as the inventory of species in a given environment, but also the diversity of their interactions, with both aspects being attainable using molecular markers and phylogenetic approaches. We exemplify the suitability and utility of this framework for large-scale biodiversity assessment with the results of our ongoing projects trying to characterise the communities of leaf beetles and their host plants in several tropical setups. Moreover, we propose that approaches similar to ours, establishing the inventories of two ecologically inter-related and species-rich groups of organisms, such as insect herbivores and their angiosperm host-plants, can serve as the foundational stone to anchor a comprehensive assessment of diversity, also in tropical environments, by subsequent addition of trophic levels. PMID:27408583

Indices for assessing coral reef fish biodiversity: the need for a change in habits.

Science.gov (United States)

Loiseau, Nicolas; Gaertner, Jean-Claude

2015-09-01

We present the first representative and quantified overview of the indices used worldwide for assessing the biodiversity of coral reef fishes. On this basis, we discuss the suitability and drawbacks of the indices most widely used in the assessment of coral fish biodiversity. An extensive and systematic survey of the literature focused on coral reef fish biodiversity was conducted from 1990 up to the present. We found that the multicomponent aspect of biodiversity, which is considered as a key feature of biodiversity for numerous terrestrial and marine ecosystems, has been poorly taken into account in coral reef fish studies. Species richness is still strongly dominant while other diversity components, such as functional diversity, are underestimated even when functional information is available. We also demonstrate that the reason for choosing particular indices is often unclear, mainly based on empirical rationales and/or the reproduction of widespread habits, but generally with no clear relevance with regard to the aims of the studies. As a result, the most widely used indices (species richness, Shannon, etc.) would appear to be poorly suited to meeting the main challenges facing the monitoring of coral reef fish biodiversity in the future. Our results clearly show that coral reef scientists should rather take advantage of the multicomponent aspect of biodiversity. To facilitate this approach, we propose general guidelines to serve as a basis for the selection of indices that provide complementary and relevant information for monitoring the response of coral reef fish biodiversity in the face of structuring factors (natural or anthropic). The aim of these guidelines was to achieve a better match between the properties of the selected indices and the context of each study (e.g. expected effect of the main structuring factors, nature of data available).

The Nature Index: A General Framework for Synthesizing Knowledge on the State of Biodiversity

Science.gov (United States)

Certain, Grégoire; Skarpaas, Olav; Bjerke, Jarle-Werner; Framstad, Erik; Lindholm, Markus; Nilsen, Jan-Erik; Norderhaug, Ann; Oug, Eivind; Pedersen, Hans-Christian; Schartau, Ann-Kristin; van der Meeren, Gro I.; Aslaksen, Iulie; Engen, Steinar; Garnåsjordet, Per-Arild; Kvaløy, Pål; Lillegård, Magnar; Yoccoz, Nigel G.; Nybø, Signe

2011-01-01

The magnitude and urgency of the biodiversity crisis is widely recognized within scientific and political organizations. However, a lack of integrated measures for biodiversity has greatly constrained the national and international response to the biodiversity crisis. Thus, integrated biodiversity indexes will greatly facilitate information transfer from science toward other areas of human society. The Nature Index framework samples scientific information on biodiversity from a variety of sources, synthesizes this information, and then transmits it in a simplified form to environmental managers, policymakers, and the public. The Nature Index optimizes information use by incorporating expert judgment, monitoring-based estimates, and model-based estimates. The index relies on a network of scientific experts, each of whom is responsible for one or more biodiversity indicators. The resulting set of indicators is supposed to represent the best available knowledge on the state of biodiversity and ecosystems in any given area. The value of each indicator is scaled relative to a reference state, i.e., a predicted value assessed by each expert for a hypothetical undisturbed or sustainably managed ecosystem. Scaled indicator values can be aggregated or disaggregated over different axes representing spatiotemporal dimensions or thematic groups. A range of scaling models can be applied to allow for different ways of interpreting the reference states, e.g., optimal situations or minimum sustainable levels. Statistical testing for differences in space or time can be implemented using Monte-Carlo simulations. This study presents the Nature Index framework and details its implementation in Norway. The results suggest that the framework is a functional, efficient, and pragmatic approach for gathering and synthesizing scientific knowledge on the state of biodiversity in any marine or terrestrial ecosystem and has general applicability worldwide. PMID:21526118

Do recreational activities affect coastal biodiversity?

Science.gov (United States)

Riera, Rodrigo; Menci, Cristiano; Sanabria-Fernández, José Antonio; Becerro, Mikel A.

2016-09-01

Human activities are largely affecting coastal communities worldwide. Recreational perturbations have been overlooked in comparison to other perturbations, yet they are potential threats to marine biodiversity. They affect coastal communities in different ways, underpinning consistent shifts in fish and invertebrates assemblages. Several sites were sampled subjected to varying effects by recreational fishermen (low and high pressure) and scuba divers (low and high) in an overpopulated Atlantic island. Non-consistent differences in ecological, trophic and functional diversity were found in coastal communities, considering both factors (;diving; and ;fishing;). Multivariate analyses only showed significant differences in benthic invertebrates between intensively-dived and non-dived sites. The lack of clear trends may be explained by the depletion of coastal resources in the study area, an extensively-affected island by overfishing.

Coccolithophores: Functional Biodiversity, Enzymes and Bioprospecting

Directory of Open Access Journals (Sweden)

Michael J. Allen

2011-04-01

Full Text Available Emiliania huxleyi is a single celled, marine phytoplankton with global distribution. As a key species for global biogeochemical cycling, a variety of strains have been amassed in various culture collections. Using a library consisting of 52 strains of E. huxleyi and an ‘in house‘ enzyme screening program, we have assessed the functional biodiversity within this species of fundamental importance to global biogeochemical cycling, whilst at the same time determining their potential for exploitation in biocatalytic applications. Here, we describe the screening of E. huxleyi strains, as well as a coccolithovirus infected strain, for commercially relevant biocatalytic enzymes such as acid/alkali phosphodiesterase, acid/alkali phosphomonoesterase, EC1.1.1-type dehydrogenase, EC1.3.1-type dehydrogenase and carboxylesterase.

Citation patterns of a controversial and high-impact paper: Worm et al. (2006 "Impacts of biodiversity loss on ocean ecosystem services".

Directory of Open Access Journals (Sweden)

Trevor A Branch

Full Text Available Citation patterns were examined for Worm et al. 2006 (Science 314:787-790, a high-impact paper that focused on relationships between marine biodiversity and ecosystem services. This paper sparked much controversy through its projection, highlighted in the press release, that all marine fisheries would be collapsed by 2048. Analysis of 664 citing papers revealed that only a small percentage (11% referred to the 2048 projection, while 39% referred to fisheries collapse in general, and 40% to biodiversity and ecosystem services. The 2048 projection was mentioned more often in papers published soon after the original paper, in low-impact journals, and in journals outside of fields that would be expected to focus on biodiversity. Citing papers also mentioned the 2048 projection more often if they had few authors (28% of single-author papers vs. 2% of papers with 10 or more authors. These factors suggest that the more knowledgeable the authors of citing papers were about the controversy over the 2048 projection, the less likely they were to refer to it. A noteworthy finding was that if the original authors were also involved in the citing papers, they rarely (1 of 55 papers, 2% mentioned the 2048 projection. Thus the original authors have emphasized the broader concerns about biodiversity loss, rather than the 2048 projection, as the key result of their study.

Citation patterns of a controversial and high-impact paper: Worm et al. (2006) "Impacts of biodiversity loss on ocean ecosystem services".

Science.gov (United States)

Branch, Trevor A

2013-01-01

Citation patterns were examined for Worm et al. 2006 (Science 314:787-790), a high-impact paper that focused on relationships between marine biodiversity and ecosystem services. This paper sparked much controversy through its projection, highlighted in the press release, that all marine fisheries would be collapsed by 2048. Analysis of 664 citing papers revealed that only a small percentage (11%) referred to the 2048 projection, while 39% referred to fisheries collapse in general, and 40% to biodiversity and ecosystem services. The 2048 projection was mentioned more often in papers published soon after the original paper, in low-impact journals, and in journals outside of fields that would be expected to focus on biodiversity. Citing papers also mentioned the 2048 projection more often if they had few authors (28% of single-author papers vs. 2% of papers with 10 or more authors). These factors suggest that the more knowledgeable the authors of citing papers were about the controversy over the 2048 projection, the less likely they were to refer to it. A noteworthy finding was that if the original authors were also involved in the citing papers, they rarely (1 of 55 papers, 2%) mentioned the 2048 projection. Thus the original authors have emphasized the broader concerns about biodiversity loss, rather than the 2048 projection, as the key result of their study.

Consequences of biodiversity loss diverge from expectation due to post-extinction compensatory responses

Science.gov (United States)

Thomsen, Matthias S.; Garcia, Clement; Bolam, Stefan G.; Parker, Ruth; Godbold, Jasmin A.; Solan, Martin

2017-03-01

Consensus has been reached that global biodiversity loss impairs ecosystem functioning and the sustainability of services beneficial to humanity. However, the ecosystem consequences of extinction in natural communities are moderated by compensatory species dynamics, yet these processes are rarely accounted for in impact assessments and seldom considered in conservation programmes. Here, we use marine invertebrate communities to parameterise numerical models of sediment bioturbation - a key mediator of biogeochemical cycling - to determine whether post-extinction compensatory mechanisms alter biodiversity-ecosystem function relations following non-random extinctions. We find that compensatory dynamics lead to trajectories of sediment mixing that diverge from those without compensation, and that the form, magnitude and variance of each probabilistic distribution is highly influenced by the type of compensation and the functional composition of surviving species. Our findings indicate that the generalized biodiversity-function relation curve, as derived from multiple empirical investigations of random species loss, is unlikely to yield representative predictions for ecosystem properties in natural systems because the influence of post-extinction community dynamics are under-represented. Recognition of this problem is fundamental to management and conservation efforts, and will be necessary to ensure future plans and adaptation strategies minimize the adverse impacts of the biodiversity crisis.

The Pelagos Sanctuary for Mediterranean marine mammals: Marine Protected Area (MPA) or marine polluted area? The case study of the striped dolphin (Stenella coeruleoalba).

Science.gov (United States)

Fossi, Maria Cristina; Panti, Cristina; Marsili, Letizia; Maltese, Silvia; Spinsanti, Giacomo; Casini, Silvia; Caliani, Ilaria; Gaspari, Stefania; Muñoz-Arnanz, Juan; Jimenez, Begoña; Finoia, Maria Grazia

2013-05-15

The concurrence of man-made pressures on cetaceans in the Mediterranean Sea is potentially affecting population stability and marine biodiversity. This needs to be proven for the only pelagic marine protected area in the Mediterranean Sea: the Pelagos Sanctuary for Mediterranean Marine Mammals. Here we applied a multidisciplinary tool, using diagnostic markers elaborated in a statistical model to rank toxicological stress in Mediterranean cetaceans. As a case study we analyzed persistent, bioaccumulative and toxic chemicals combined with a wide range of diagnostic markers of exposure to anthropogenic contaminants and genetic variation as marker of genetic erosion in striped dolphin (Stenella coeruleoalba) skin biopsies. Finally, a statistical model was applied to obtain a complete toxicological profile of the striped dolphin in the Pelagos Sanctuary and other Mediterranean areas (Ionian Sea and Strait of Gibraltar). Here we provide the first complete evidence of the toxicological stress in cetaceans living in Pelagos Sanctuary. Copyright © 2013 Elsevier Ltd. All rights reserved.

Marine biotechnologies and synthetic biology, new issues for a fair and equitable profit-sharing commercial use.

Science.gov (United States)

Bloch, Jean-François; Tardieu-Guigues, Elisabeth

2014-10-01

The sea will be a source of economic development in the next years. Today the research works in marine biotechnologies supply new products and processes. The introduction in the laboratories of a new technology, synthesis biology, is going to increase the possibilities of creation of new products. Exploitation of product stemming from marine biodiversity has to be made with regard to various rights among which industrial property law, maritime law and the Convention on BioDiversity. All participants involved in the promotion of research in marine biotechnology must address the fair and equitable sharing of any commercial exploitation. Carrying out work involving synthetic biology has increased the number of unanswered questions about how operators should manage in order to avoid any threat of being sued for infringements of IP rights or for alleged bio-piracy. This paper, by no means exhaustive in the field, analyzes some of the issues raised on the modification to the landscape in marine biotechnology by the advent of synthetic biology. Such issues indicate how important the collaboration between researchers, industrialists, lawyers is for allowing proper use of marine biotech. Copyright © 2014 Elsevier B.V. All rights reserved.

Towards Arctic Resource Governance of Marine Invasive Species

DEFF Research Database (Denmark)

Kourantidou, Melina; Kaiser, Brooks; Fernandez, Linda

2015-01-01

Scientific and policy-oriented publications highlighting the magnitude of uncertainty in the changing Arctic and the possibilities for effective regional governance are proliferating, yet it remains a challenging task to examine Arctic marine biodiversity. Limited scientific data are currently...... available. Through analysis of marine invasions in the Arctic, we work to identify and assess patterns in the knowledge gaps regarding invasive species in the Arctic that affect the ability to generate improved governance outcomes. These patterns are expected to depend on multiple aspects of scientific...... research into invasive species threats in the Arctic, including the ways in which known marine invasions are related to different stakeholder groups and existing disparate national and international experiences with invasive species. Stakeholdergroups include dominant industries (fishing, shipping, tourism...

Biodiversity of the Great Barrier Reef—how adequately is it protected?

Directory of Open Access Journals (Sweden)

Zoe T. Richards

2018-05-01

Full Text Available Background The Great Barrier Reef (GBR is the world’s most iconic coral reef ecosystem, recognised internationally as a World Heritage Area of outstanding significance. Safeguarding the biodiversity of this universally important reef is a core legislative objective; however, ongoing cumulative impacts including widespread coral bleaching and other detrimental impacts have heightened conservation concerns for the future of the GBR. Methods Here we review the literature to report on processes threatening species on the GBR, the status of marine biodiversity, and evaluate the extent of species-level monitoring and reporting. We assess how many species are listed as threatened at a global scale and explore whether these same species are protected under national threatened species legislation. We conclude this review by providing future directions for protecting potentially endangered elements of biodiversity within the GBR. Results Most of the threats identified to be harming the diversity of marine life on the GBR over the last two–three decades remain to be effectively addressed and many are worsening. The inherent resilience of this globally significant coral reef ecosystem has been seriously compromised and various elements of the biological diversity for which it is renowned may be at risk of silent extinction. We show at least 136 of the 12,000+ animal species known to occur on the GBR (approximately 20% of the 700 species assessed by the IUCN occur in elevated categories of threat (Critically Endangered, Endangered or Vulnerable at a global scale. Despite the wider background level of threat for these 136 species, only 23 of them are listed as threatened under regional or national legislation. Discussion To adequately protect the biodiversity values of the GBR, it may be necessary to conduct further targeted species-level monitoring and reporting to complement ecosystem management approaches. Conducting a vigorous value of information

Assessing the impact of plantation forestry on plant biodiversity

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Andreas Ch. Braun

2017-04-01

Full Text Available Effects of plantation forestry on biodiversity are controversially discussed in literature. While some authors stress positive effects, others tend to attribute a largely negative influence to plantations. One important factor steering the influence on biodiversity are management practices. A second important factor is the environmental matrix. Chile offers the option to analyse both factors jointly. The coastal range of central Chile has experienced rapid and widespread replacement of native Nothofagus spp. forests in favour of Pinus radiata plantations. Here, native forests remain limited to small patches surrounded by an environmental matrix of plantations. Management is rather intensive and not designed to maintain biodiversity. While in the coastal range of central Chile the transformation from native forests to non-native tree plantations has almost come to an end, spatial extension of P. contorta and P. ponderosa plantations has just recently begun in Chilean Patagonia. While the management is similar to central Chile, plantations rather exist as small patches surrounded by an environmental matrix of native plant formations (e.g. Nothofagus spp. forests and Nothofagus spp. scrublands. In the framework of this work, effects of the two diametric land usages on biodiversity are assessed and compared. Biodiversity is assessed at the α-, β- and γ-scale. At the α-scale, biodiversity impacts are inferred statistically, using one-way ANOVA and Tukey’s PostHoc test. Biodiversity of plants at both sites is significantly reduced in plantations when compared to native forests or scrublands. Plantation forestry lowers α-biodiversity and does not provide additional habitats for specialists. At the β-scale, weak edge effects due to the presence of native forests are observed. In total, plantation forestry tends to promote plant invasions and impairs the survival of endemics. At the γ-scale, plant species communities where predominantly native

Climate change impacts on biodiversity and ecosystems in Sri Lanka: a review

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Jeevan Dananjaya Kottawa-Arachchi

2017-10-01

Full Text Available The climate change impacts are felt by all facets and sectors of ecosystems, covering flora, fauna and environment. Sri Lanka is considered as a vulnerable, small island country that is under serious threat from climate change impacts. The most profound impacts of climate change in Sri Lanka will be on agriculture and food security, water and coastal resources, biodiversity changes, and human health. Sri Lanka's biodiversity is significantly important both on a regional and global scale as it has the highest species density for flowering plants, amphibians, reptiles, and mammals. Sri Lanka's varied ecosystems provide many services that are of significant economic value and play a crucial role in providing goods and ecosystem services. The subsequent sections featuring specific aspects of biodiversity in forests, freshwater wetlands, coastal and marine systems and agricultural systems, provide greater detail on the ecosystem services and bio-resources. Habitat loss and fragmentation, invasive alien species, deforestation and forest degradation, development projects, environmental pollutions and climate change (global warming are the major threats to the biodiversity of the country. Climate change impacts on environment lead to a reduction in the distribution and abundance of species, especially endemics, which may even result in their global extinction. The introduction of various policies and guidelines in relation to environment is a good sign for conservation of ecosystems and biodiversity. The government of Sri Lanka has been implementing various environmental projects aiming at reducing deforestation and degradation of ecosystems. Policies and measures already developed under such initiatives will no doubt preserve natural habitats for plant and animal species. However, being a developing country with many economic challenges, the funds and expertise available for monitoring climate change impacts and biodiversity conservation are not

Net present biodiversity value and the design of biodiversity offsets.

Science.gov (United States)

Overton, Jacob McC; Stephens, R T Theo; Ferrier, Simon

2013-02-01

There is an urgent need to develop sound theory and practice for biodiversity offsets to provide a better basis for offset multipliers, to improve accounting for time delays in offset repayments, and to develop a common framework for evaluating in-kind and out-of-kind offsets. Here, we apply concepts and measures from systematic conservation planning and financial accounting to provide a basis for determining equity across type (of biodiversity), space, and time. We introduce net present biodiversity value (NPBV) as a theoretical and practical measure for defining the offset required to achieve no-net-loss. For evaluating equity in type and space we use measures of biodiversity value from systematic conservation planning. Time discount rates are used to address risk of non-repayment, and loss of utility. We illustrate these concepts and measures with two examples of biodiversity impact-offset transactions. Considerable further work is required to understand the characteristics of these approaches.

Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable.

Directory of Open Access Journals (Sweden)

Roberto Danovaro

Full Text Available Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth, including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components

Biodiversity hotspot for marine invertebrates around the Dokdo, East Sea, Korea: Ecological checklist revisited.

Science.gov (United States)

Song, Sung Joon; Park, Jinsoon; Ryu, Jongseong; Rho, Hyun Soo; Kim, Won; Khim, Jong Seong

2017-06-30

We extensively reviewed the macrozoobenthos around Dokdo, Korea, by analyzing metadata collected over the past 50years. The Dokdo macrozoobenthos was represented by 578 species belonging to 243 families from 12 phyla, where four major phyla (or classes) collectively accounted for 86% to total. Mollusks, arthropods, and cnidarians were semi-equally occurred in intertidal and subtidal areas, while polychetes dominated the subtidal zone. The northern most region of Dokdo had the greatest biodiversity (173 species). The taxonomic distinctness analysis (delta+) indicated a close association between species by region, although the number of species varied greatly. About half of the species did not occur cross the locations (n=20), indicating strong habitat preferences of Dokdo macrofaunal assemblages. Overall, the diversity of Dokdo was greater than that of Ulleung Island (east coast), but comparable to that of the well-developed tidal flats in the western Korean waters, highlighting its status as a biodiversity hotspot. Copyright © 2017 Elsevier Ltd. All rights reserved.

A Marine Spatial Planning Framework for the Optimal Sitting of Marine Renewable Energy Installations

DEFF Research Database (Denmark)

Azzelino, A.; Kofoed, Jens Peter; Lanfredi, C.

2013-01-01

In this analysis two Danish case studies are investigated using a spatial planning approach. The first case study concerns the area on the west coast of Denmark that has been elected as test site by the Danish Wave Energy Center (DanWEC), a foundation constituted by local authorities, Aalborg...... University supported by the national wave energy industry. The second case study attains the Danish portion of the western Baltic sea, where many offshore windfarms are already installed and many projects are in construction or in the planning stage. The environmental background for the two areas...... is considered through set of multiple indicators (e.g. sea bottom topography and characteristics, marine biodiversity, presence of vulnerable species). Environmental indicators are aggregated into environmental impact indexes that constitute the basis for evaluating the site suitability for Marine Renewable...

Fishes of the Vitória-Trindade Chain: Biodiversity, Biogeography and Evolution

OpenAIRE

Pinheiro, Hudson Tercio

2016-01-01

Studies on the ecology and biogeography of seamounts and oceanic islands have advanced substantially in the last 60 years. However, few seamounts have been scientifically characterized, with basic aspects of their biodiversity still unknown and many hypotheses not empirically tested. Consequently, the role of seamounts in the evolution for marine species is still unclear. In the south Atlantic, the Vitória-Trindade Chain (VTC) extends ca. 1,200 km offshore the Brazilian coast. For a long time...

Towards global interoperability for supporting biodiversity research on Essential Biodiversity Variables (EBVs)

NARCIS (Netherlands)

Kissling, W.D.; Hardisty, A.; García, E.A.; Santamaria, M.; De Leo, F.; Pesole, G.; Freyhof, J.; Manset, D.; Wissel, S.; Konijn, J.; Los, W.

2015-01-01

Essential biodiversity variables (EBVs) have been proposed by the Group on Earth Observations Biodiversity Observation Network (GEO BON) to identify a minimum set of essential measurements that are required for studying, monitoring and reporting biodiversity and ecosystem change. Despite the initial

Achieving biodiversity benefits with offsets: Research gaps, challenges, and needs.

Science.gov (United States)

Gelcich, Stefan; Vargas, Camila; Carreras, Maria Jose; Castilla, Juan Carlos; Donlan, C Josh

2017-03-01

Biodiversity offsets are becoming increasingly common across a portfolio of settings: national policy, voluntary programs, international lending, and corporate business structures. Given the diversity of ecological, political, and socio-economic systems where offsets may be applied, place-based information is likely to be most useful in designing and implementing offset programs, along with guiding principles that assure best practice. We reviewed the research on biodiversity offsets to explore gaps and needs. While the peer-reviewed literature on offsets is growing rapidly, it is heavily dominated by ecological theory, wetland ecosystems, and U.S.-based research. Given that majority of offset policies and programs are occurring in middle- and low-income countries, the research gaps we identified present a number of risks. They also present an opportunity to create regionally based learning platforms focused on pilot projects and institutional capacity building. Scientific research should diversify, both topically and geographically, in order to support the successful design, implementation, and monitoring of biodiversity offset programs.

Biodiversity conservation and a conception for a national desert park in Dzungaria Basin, Xinjiang

OpenAIRE

Xinshi Zhang; Haiping Tang; Lijuan Yan

2008-01-01

Dzungaria Basin in Xinjiang possesses the most abundant biological resources of animals and plants among the temperate deserts in the world. It has been influenced negatively by the human disturbance such as overgrazing, farming, wood harvesting, digging herbs and illegal hunting as well as by the rapid industrial development for mineral and energy resources such as oil and coal. A plan for biodiversity conservation is so urgent for the basin that the contradiction between biodiversity protec...

Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment

KAUST Repository

Aylagas, Eva

2016-06-10

Characterization of biodiversity has been extensively used to confidently monitor and assess environmental status. Yet, visual morphology, traditionally and widely used for species identification in coastal and marine ecosystem communities, is tedious and entails limitations. Metabarcoding coupled with high-throughput sequencing (HTS) represents an alternative to rapidly, accurately, and cost-effectively analyze thousands of environmental samples simultaneously, and this method is increasingly used to characterize the metazoan taxonomic composition of a wide variety of environments. However, a comprehensive study benchmarking visual and metabarcoding-based taxonomic inferences that validates this technique for environmental monitoring is still lacking. Here, we compare taxonomic inferences of benthic macroinvertebrate samples of known taxonomic composition obtained using alternative metabarcoding protocols based on a combination of different DNA sources, barcodes of the mitochondrial cytochrome oxidase I gene and amplification conditions. Our results highlight the influence of the metabarcoding protocol in the obtained taxonomic composition and suggest the better performance of an alternative 313 bp length barcode to the traditionally 658 bp length one used for metazoan metabarcoding. Additionally, we show that a biotic index inferred from the list of macroinvertebrate taxa obtained using DNA-based taxonomic assignments is comparable to that inferred using morphological identification. Thus, our analyses prove metabarcoding valid for environmental status assessment and will contribute to accelerating the implementation of this technique to regular monitoring programs.

Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment

KAUST Repository

Aylagas, Eva; Borja, Á ngel; Irigoien, Xabier; Rodrí guez-Ezpeleta, Naiara

2016-01-01

Characterization of biodiversity has been extensively used to confidently monitor and assess environmental status. Yet, visual morphology, traditionally and widely used for species identification in coastal and marine ecosystem communities, is tedious and entails limitations. Metabarcoding coupled with high-throughput sequencing (HTS) represents an alternative to rapidly, accurately, and cost-effectively analyze thousands of environmental samples simultaneously, and this method is increasingly used to characterize the metazoan taxonomic composition of a wide variety of environments. However, a comprehensive study benchmarking visual and metabarcoding-based taxonomic inferences that validates this technique for environmental monitoring is still lacking. Here, we compare taxonomic inferences of benthic macroinvertebrate samples of known taxonomic composition obtained using alternative metabarcoding protocols based on a combination of different DNA sources, barcodes of the mitochondrial cytochrome oxidase I gene and amplification conditions. Our results highlight the influence of the metabarcoding protocol in the obtained taxonomic composition and suggest the better performance of an alternative 313 bp length barcode to the traditionally 658 bp length one used for metazoan metabarcoding. Additionally, we show that a biotic index inferred from the list of macroinvertebrate taxa obtained using DNA-based taxonomic assignments is comparable to that inferred using morphological identification. Thus, our analyses prove metabarcoding valid for environmental status assessment and will contribute to accelerating the implementation of this technique to regular monitoring programs.

Multi-generational responses of a marine polychaete to a rapid change in seawater pCO2.

Science.gov (United States)

Rodríguez-Romero, Araceli; Jarrold, Michael D; Massamba-N'Siala, Gloria; Spicer, John I; Calosi, Piero

2016-10-01

Little is known of the capacity that marine metazoans have to evolve under rapid p CO 2 changes. Consequently, we reared a marine polychaete, Ophryotrocha labronica , previously cultured for approximately 33 generations under a low/variable pH regime, under elevated and low p CO 2 for six generations. The strain used was found to be tolerant to elevated p CO 2 conditions. In generations F1 and F2 females' fecundity was significantly lower in the low p CO 2 treatment. However, from generation F3 onwards there were no differences between p CO 2 treatments, indicating that trans-generational effects enabled the restoration and maintenance of reproductive output. Whilst the initial fitness recovery was likely driven by trans-generational plasticity (TGP), the results from reciprocal transplant assays, performed using F7 individuals, made it difficult to disentangle between whether TGP had persisted across multiple generations, or if evolutionary adaptation had occurred. Nonetheless, both are important mechanisms for persistence under climate change. Overall, our study highlights the importance of multi-generational experiments in more accurately determining marine metazoans' responses to changes in p CO 2 , and strengthens the case for exploring their use in conservation, by creating specific p CO 2 tolerant strains of keystone ecosystem species.

Habitat structure mediates biodiversity effects on ecosystem properties.

Science.gov (United States)

Godbold, J A; Bulling, M T; Solan, M

2011-08-22

Much of what we know about the role of biodiversity in mediating ecosystem processes and function stems from manipulative experiments, which have largely been performed in isolated, homogeneous environments that do not incorporate habitat structure or allow natural community dynamics to develop. Here, we use a range of habitat configurations in a model marine benthic system to investigate the effects of species composition, resource heterogeneity and patch connectivity on ecosystem properties at both the patch (bioturbation intensity) and multi-patch (nutrient concentration) scale. We show that allowing fauna to move and preferentially select patches alters local species composition and density distributions, which has negative effects on ecosystem processes (bioturbation intensity) at the patch scale, but overall positive effects on ecosystem functioning (nutrient concentration) at the multi-patch scale. Our findings provide important evidence that community dynamics alter in response to localized resource heterogeneity and that these small-scale variations in habitat structure influence species contributions to ecosystem properties at larger scales. We conclude that habitat complexity forms an important buffer against disturbance and that contemporary estimates of the level of biodiversity required for maintaining future multi-functional systems may need to be revised.

Bacterial communities in sediment of a Mediterranean marine protected area.

Science.gov (United States)

Catania, Valentina; Sarà, Gianluca; Settanni, Luca; Quatrini, Paola

2017-04-01

Biodiversity is crucial in preservation of ecosystems, and bacterial communities play an indispensable role for the functioning of marine ecosystems. The Mediterranean marine protected area (MPA) "Capo Gallo-Isola delle Femmine" was instituted to preserve marine biodiversity. The bacterial diversity associated with MPA sediment was compared with that from sediment of an adjacent harbour exposed to intense nautical traffic. The MPA sediment showed higher diversity with respect to the impacted site. A 16S rDNA clone library of the MPA sediment allowed the identification of 7 phyla: Proteobacteria (78%), Firmicutes (11%), Acidobacteria (3%), Actinobacteria (3%), Bacteroidetes (2%), Planctomycetes (2%), and Cyanobacteria (1%). Analysis of the hydrocarbon (HC)-degrading bacteria was performed using enrichment cultures. Most of the MPA sediment isolates were affiliated with Gram-positive G+C rich bacteria, whereas the majority of taxa in the harbour sediment clustered with Alpha- and Gammaproteobacteria; no Gram-positive HC degraders were isolated from the harbour sediment. Our results show that protection probably has an influence on bacterial diversity, and suggest the importance of monitoring the effects of protection at microbial level as well. This study creates a baseline of data that can be used to assess changes over time in bacterial communities associated with a Mediterranean MPA.

Global biodiversity loss: Exaggerated versus realistic estimates

Directory of Open Access Journals (Sweden)

John C. Briggs

2016-06-01

Full Text Available For the past 50 years, the public has been made to feel guilty about the tragedy of human-caused biodiversity loss due to the extinction of hundreds or thousands of species every year. Numerous articles and books from the scientific and popular press and publicity on the internet have contributed to a propaganda wave about our grievous loss and the beginning of a sixth mass extinction. However, within the past few years, questions have arisen about the validity of the data which led to the doom scenario. Here I show that, for the past 500 years, terrestrial animals (insects and vertebrates have been losing less than two species per year due to human causes. The majority of the extinctions have occurred on oceanic islands with little effect on continental ecology. In the marine environment, losses have also been very low. At the same time, speciation has continued to occur and biodiversity gain by this means may have equaled or even surpassed the losses. While species loss is not, so far, a global conservation problem, ongoing population declines within thousands of species that are at risk on land and in the sea constitute an extinction debt that will be paid unless those species can be rescued.

Remote sensing of Essential Biodiversity Variables: new measurements linking ecosystem structure, function and composition

Science.gov (United States)

Schimel, D.; Pavlick, R.; Stavros, E. N.; Townsend, P. A.; Ustin, S.; Thompson, D. R.

2017-12-01

Remote sensing can inform a wide variety of essential biodiversity variables, including measurements that define primary productivity, forest structure, biome distribution, plant communities, land use-land cover change and climate drivers of change. Emerging remote sensing technologies can add significantly to remote sensing of EBVs, providing new, large scale insights on plant and habitat diversity itself, as well as causes and consequences of biodiversity change. All current biodiversity assessments identify major data gaps, with insufficient coverage in critical regions, limited observations to monitor change over time, with very limited revisit of sample locations, as well as taxon-specific biased biases. Remote sensing cannot fill many of the gaps in global biodiversity observations, but spectroscopic measurements in terrestrial and marine environments can aid in assessing plant/phytoplankton functional diversity and efficiently reveal patterns in space, as well as changes over time, and, by making use of chlorophyll fluorescence, reveal associated patterns in photosynthesis. LIDAR and RADAR measurements quantify ecosystem structure, and can precisely define changes due to growth, disturbance and land use. Current satellite-based EBVs have taken advantage of the extraordinary time series from LANDSAT and MODIS, but new measurements more directly reveal ecosystem structure, function and composition. We will present results from pre-space airborne studies showing the synergistic ability of a suite of new remote observation techniques to quantify biodiversity and ecosystem function and show how it changes during major disturbance events.

Marine natural products: a new wave of drugs?

Science.gov (United States)

Montaser, Rana; Luesch, Hendrik

2011-01-01

The largely unexplored marine world that presumably harbors the most biodiversity may be the vastest resource to discover novel ‘validated’ structures with novel modes of action that cover biologically relevant chemical space. Several challenges, including the supply problem and target identification, need to be met for successful drug development of these often complex molecules; however, approaches are available to overcome the hurdles. Advances in technologies such as sampling strategies, nanoscale NMR for structure determination, total chemical synthesis, fermentation and biotechnology are all crucial to the success of marine natural products as drug leads. We illustrate the high degree of innovation in the field of marine natural products, which in our view will lead to a new wave of drugs that flow into the market and pharmacies in the future. PMID:21882941

Averting biodiversity collapse in tropical forest protected areas

OpenAIRE

Laurance, William F; Useche, D. Carolina; Rendeiro, Julio; Kalka, Margareta; Bradshaw, Corey J A; Sloan, Sean P; Laurance, Susan G; Campbell, Mason; Abernethy, Kate; Alvarez, Patricia; Arroyo-Rodriguez, Victor; Ashton, Peter; Benitez-Malvido, Julieta; Blom, Allard; Bobo, Kadiri S

2012-01-01

The rapid disruption of tropical forests probably imperils global biodiversity more than any other contemporary phenomenon(1-3). With deforestation advancing quickly, protected areas are increasingly becoming final refuges for threatened species and natural ecosystem processes. However, many protected areas in the tropics are themselves vulnerable to human encroachment and other environmental stresses(4-9). As pressures mount, it is vital to know whether existing reserves can sustain their bi...

Towards ecosystem-based management: Identifying operational food-web indicators for marine ecosystems

DEFF Research Database (Denmark)

Tam, Jamie C.; Link, Jason S.; Rossberg, Axel G.

2017-01-01

) are an important aspect of all marine ecosystems and biodiversity. Here we describe and discuss a process to evaluate the selection of operational food-web indicators for use in evaluating marine ecosystem status. This process brought together experts in food-web ecology, marine ecology, and resource management......, to identify available indicators that can be used to inform marine management. Standard evaluation criteria (availability and quality of data, conceptual basis, communicability, relevancy to management) were implemented to identify practical food-web indicators ready for operational use and indicators...... that hold promise for future use in policy and management. The major attributes of the final suite of operational food-web indicators were structure and functioning. Indicators that represent resilience of the marine ecosystem were less developed. Over 60 potential food-web indicators were evaluated...

Meta-analysis reveals complex marine biological responses to the interactive effects of ocean acidification and warming

Science.gov (United States)

Harvey, Ben P; Gwynn-Jones, Dylan; Moore, Pippa J

2013-01-01

Ocean acidification and warming are considered two of the greatest threats to marine biodiversity, yet the combined effect of these stressors on marine organisms remains largely unclear. Using a meta-analytical approach, we assessed the biological responses of marine organisms to the effects of ocean acidification and warming in isolation and combination. As expected biological responses varied across taxonomic groups, life-history stages, and trophic levels, but importantly, combining stressors generally exhibited a stronger biological (either positive or negative) effect. Using a subset of orthogonal studies, we show that four of five of the biological responses measured (calcification, photosynthesis, reproduction, and survival, but not growth) interacted synergistically when warming and acidification were combined. The observed synergisms between interacting stressors suggest that care must be made in making inferences from single-stressor studies. Our findings clearly have implications for the development of adaptive management strategies particularly given that the frequency of stressors interacting in marine systems will be likely to intensify in the future. There is now an urgent need to move toward more robust, holistic, and ecologically realistic climate change experiments that incorporate interactions. Without them accurate predictions about the likely deleterious impacts to marine biodiversity and ecosystem functioning over the next century will not be possible. PMID:23610641

Marine palynology in progress

NARCIS (Netherlands)

Manten, A.A.

1966-01-01

One of the things which the Second International Conference on Palynology (held in Utrecht, August 29-September 3, 1966) revealed, was the rapid expansion which marine palynological research has undergone in recent years. This was the main stimulus to organize this special issue of Marine

The Hawaiian freshwater algae biodiversity survey (2009–2014): systematic and biogeographic trends with an emphasis on the macroalgae

Science.gov (United States)

2014-01-01

Background A remarkable range of environmental conditions is present in the Hawaiian Islands due to their gradients of elevation, rainfall and island age. Despite being well known as a location for the study of evolutionary processes and island biogeography, little is known about the composition of the non-marine algal flora of the archipelago, its degree of endemism, or affinities with other floras. We conducted a biodiversity survey of the non-marine macroalgae of the six largest main Hawaiian Islands using molecular and microscopic assessment techniques. We aimed to evaluate whether endemism or cosmopolitanism better explain freshwater algal distribution patterns, and provide a baseline data set for monitoring future biodiversity changes in the Hawaiian Islands. Results 1,786 aquatic and terrestrial habitats and 1,407 distinct collections of non-marine macroalgae were collected from the islands of Kauai, Oahu, Molokai, Maui, Lanai and Hawaii from the years 2009–2014. Targeted habitats included streams, wet walls, high elevation bogs, taro fields, ditches and flumes, lakes/reservoirs, cave walls and terrestrial areas. Sites that lacked freshwater macroalgae were typically terrestrial or wet wall habitats that were sampled for diatoms and other microalgae. Approximately 50% of the identifications were of green algae, with lesser proportions of diatoms, red algae, cyanobacteria, xanthophytes and euglenoids. 898 DNA sequences were generated representing eight different markers, which enabled an assessment of the number of taxonomic entities for genera collected as part of the survey. Forty-four well-characterized taxa were assessed for global distribution patterns. This analysis revealed no clear biogeographic affinities of the flora, with 27.3% characterized as “cosmopolitan”, 11.4% “endemic”, and 61.3% as intermediate. Conclusions The Hawaiian freshwater algal biodiversity survey represents the first comprehensive effort to characterize the non-marine

Biodiversity impact assessment (BIA+) - methodological framework for screening biodiversity.

Science.gov (United States)

Winter, Lisa; Pflugmacher, Stephan; Berger, Markus; Finkbeiner, Matthias

2018-03-01

For the past 20 years, the life cycle assessment (LCA) community has sought to integrate impacts on biodiversity into the LCA framework. However, existing impact assessment methods still fail to do so comprehensively because they quantify only a few impacts related to specific species and regions. This paper proposes a methodological framework that will allow LCA practitioners to assess currently missing impacts on biodiversity on a global scale. Building on existing models that seek to quantify the impacts of human activities on biodiversity, the herein proposed methodological framework consists of 2 components: a habitat factor for 14 major habitat types and the impact on the biodiversity status in those major habitat types. The habitat factor is calculated by means of indicators that characterize each habitat. The biodiversity status depends on parameters from impact categories. The impact functions, relating these different parameters to a given response in the biodiversity status, rely on expert judgments. To ensure the applicability for LCA practitioners, the components of the framework can be regionalized on a country scale for which LCA inventory data is more readily available. The weighting factors for the 14 major habitat types range from 0.63 to 1.82. By means of area weighting of the major habitat types in a country, country-specific weighting factors are calculated. In order to demonstrate the main part of the framework, examples of impact functions are given for the categories "freshwater eutrophication" and "freshwater ecotoxicity" in 1 major habitat type. The results confirm suitability of the methodological framework. The major advantages are the framework's user-friendliness, given that data can be used from LCA databases directly, and the complete inclusion of all levels of biodiversity (genetic, species, and ecosystem). It is applicable for the whole world and a wide range of impact categories. Integr Environ Assess Manag 2018;14:282-297. �

The effectiveness of the mitigation hierarchy in environmental impact studies on marine ecosystems: A case study in France

International Nuclear Information System (INIS)

Jacob, Céline; Pioch, Sylvain; Thorin, Sébastien

2016-01-01

While the development of maritime economic activity is increasingly encouraged, the consideration of its impacts constitutes a real challenge. The limitations of the implementation of the mitigation hierarchy have been widely discussed in scientific literature, yet data on marine biodiversity offset practices remains scarce. In this study, we investigated the use of Environmental Impact Assessments (EIAs) as suitable instruments to achieve the No Net Loss objective. Drawing on a French approach developed for the initial assessment of the European Marine Strategy Framework Directive, we examined the pressures and impacts related to various marine development projects and the effectiveness of the mitigation hierarchy in limiting these. An analysis of 55 recent French environmental impact studies showed that only 7% of the proposed measures had the aim of offsetting predicted degradation of sites of remarkable biodiversity. This can be partly explained by the lack of a clear definition of ‘significant impact’, which varies greatly depending on what is impacted, in turn allowing socio-economic activities to benefit more easily from offset. Furthermore, offsetting does not always constitute the final step of the mitigation hierarchy, highlighting the need to reinforce avoidance and reduction steps. Although we acknowledge the role of EIA in mitigating the negative impacts of development projects, synergies with other European marine environmental policies such as the Marine Strategy Framework Directive (MSFD) and the Maritime Spatial Planning directive (MSP) should be developed in order to improve current practices. - Highlights: • Avoidance measures were not well represented in the Environmental Impact Assessments studied. • Few significant residual impacts and measures to offset these were described. • Common biodiversity did not benefit from offset measures. • The equivalency of proposed marine offsets is questionable.

The effectiveness of the mitigation hierarchy in environmental impact studies on marine ecosystems: A case study in France

Energy Technology Data Exchange (ETDEWEB)

Jacob, Céline, E-mail: celine.jacob@cefe.cnrs.fr [CEFE UMR 5175, CNRS - Université de Montpellier - Université Paul-Valéry Montpellier - EPHE - Université Paul-Valéry Montpellier, Route de Mende 34 199 Montpellier Cedex 5 (France); CREOCEAN, Les Belvédères, Bâtiment B, 128, Avenue de Fès, 34080 Montpellier (France); Pioch, Sylvain, E-mail: sylvain.pioch@gmail.com [CEFE UMR 5175, CNRS - Université de Montpellier - Université Paul-Valéry Montpellier - EPHE - Université Paul-Valéry Montpellier, Route de Mende 34 199 Montpellier Cedex 5 (France); Thorin, Sébastien, E-mail: thorin@creocean.fr [CREOCEAN, Les Belvédères, Bâtiment B, 128, Avenue de Fès, 34080 Montpellier (France)

2016-09-15

While the development of maritime economic activity is increasingly encouraged, the consideration of its impacts constitutes a real challenge. The limitations of the implementation of the mitigation hierarchy have been widely discussed in scientific literature, yet data on marine biodiversity offset practices remains scarce. In this study, we investigated the use of Environmental Impact Assessments (EIAs) as suitable instruments to achieve the No Net Loss objective. Drawing on a French approach developed for the initial assessment of the European Marine Strategy Framework Directive, we examined the pressures and impacts related to various marine development projects and the effectiveness of the mitigation hierarchy in limiting these. An analysis of 55 recent French environmental impact studies showed that only 7% of the proposed measures had the aim of offsetting predicted degradation of sites of remarkable biodiversity. This can be partly explained by the lack of a clear definition of ‘significant impact’, which varies greatly depending on what is impacted, in turn allowing socio-economic activities to benefit more easily from offset. Furthermore, offsetting does not always constitute the final step of the mitigation hierarchy, highlighting the need to reinforce avoidance and reduction steps. Although we acknowledge the role of EIA in mitigating the negative impacts of development projects, synergies with other European marine environmental policies such as the Marine Strategy Framework Directive (MSFD) and the Maritime Spatial Planning directive (MSP) should be developed in order to improve current practices. - Highlights: • Avoidance measures were not well represented in the Environmental Impact Assessments studied. • Few significant residual impacts and measures to offset these were described. • Common biodiversity did not benefit from offset measures. • The equivalency of proposed marine offsets is questionable.

Out of sight but no longer out of mind: A climate of change for marine ...

African Journals Online (AJOL)

These ecosystems are of paramount importance to national food security, as well as ... in Madagascar is unsurpassed throughout east Africa and the Indian Ocean ... as well as biodiversity benefits of sustainable marine resource management.

Effects of biotechnology on biodiversity: herbicide-tolerant and insect-resistant GM crops.

Science.gov (United States)

Ammann, Klaus

2005-08-01

Biodiversity is threatened by agriculture as a whole, and particularly also by traditional methods of agriculture. Knowledge-based agriculture, including GM crops, can reduce this threat in the future. The introduction of no-tillage practices, which are beneficial for soil fertility, has been encouraged by the rapid spread of herbicide-tolerant soybeans in the USA. The replacement of pesticides through Bt crops is advantageous for the non-target insect fauna in test-fields. The results of the British Farm Scale experiment are discussed. Biodiversity differences can mainly be referred to as differences in herbicide application management.

Investigating the biodiversity of ciliates in the 'Age of Integration'.

Science.gov (United States)

Clamp, John C; Lynn, Denis H

2017-10-01

Biology is now turning toward a more integrative approach to research, distinguished by projects that depend on collaboration across hierarchical levels of organization or across disciplines. This trend is prompted by the need to solve complex, large-scale problems and includes disciplines that could be defined as integrative biodiversity. Integrative biodiversity of protists, including that of ciliates, is still partially in its infancy. This is the result of a shortage of historical data resources such as curated museum collections. Major areas of integrative biodiversity of ciliates that have begun to emerge can be categorized as integrative systematics, phenotypic plasticity, and integrative ecology. Integrative systematics of ciliates is characterized by inclusion of diverse sources of data in treatment of taxonomy of species and phylogenetic investigations. Integrative research in phenotypic plasticity combines investigation of functional roles of individual species of ciliates with genetic and genomic data. Finally, integrative ecology focuses on genetic identity of species in communities of ciliates and their collective functional roles in ecosystems. A review of current efforts toward integrative research into biodiversity of ciliates reveals a single, overarching concern-rapid progress will be achieved only by implementing a comprehensive strategy supported by one or more groups of active researchers. Copyright © 2017 The Authors. Published by Elsevier GmbH.. All rights reserved.

Investigation into spore coat properties for the rapid identification of endospores in marine sediments

Science.gov (United States)

Rattray, J. E.; Chakraborty, A.; Bernard, B. B.; Brooks, J.; Hubert, C. R.

2017-12-01

Understanding the sediment biogeography of dormant marine thermophilic bacterial endospores (thermospores) has the potential to assist locating and characterising working petroleum systems. The presence of thermospores in cold ocean environments suggests that distribution occurs via hydrocarbon seepage from thermally active reservoirs. Low abundance and endospore coat physiology mean nucleic acid based techniques have limited success for in situ detection of thermospores. Alternative rapid analytical methods are needed so we investigated using the Schaeffer-Fulton (malachite green and safranin) and DAPI (4',6-diamidino-2-phenylindole) staining techniques on thermospores from cultures and marine sediments. Sediment samples from 111 locations in the Eastern Gulf of Mexico (100 to 3300 m water depth; 6 to 600 km apart) were incubated at high temperature, followed by construction of 16S rRNA gene amplicon libraries (V3-V4 region; Illumina MiSeq) revealing enrichment of species-level thermospore OTUs. A sulfate reducing bacterium from site EGM080 was purified and classified based on its rRNA gene sequence as Desulfotomaculum geothermicum. Prior to thermospore staining the culture was kept in the death/ decline phase for 16 weeks to promote sporulation. Samples of D. geothermicum and the source marine sediment were fixed, stained then analysed using brightfield, phase contrast or fluorescence microscopy. Thermospores in pure culture were identified using phase contrast but were difficult to observe in the sediment sample due to particle aggregation. The Schaeffer-Fulton technique aided thermospore identification in a complex sediment sample matrix as thermospores were stained bright green, and also revealed that there were only spores and no (red stained) vegetative cells in the culture. Treatment with DAPI gave dull fluorescing cells but also provided insight into the behaviour of thermospores in sediment suspensions. Spores in the culture medium were free floating but

Funding begets biodiversity

DEFF Research Database (Denmark)

Ahrends, Antje; Burgess, Neil David; Gereau, Roy E.

2011-01-01

Aim Effective conservation of biodiversity relies on an unbiased knowledge of its distribution. Conservation priority assessments are typically based on the levels of species richness, endemism and threat. Areas identified as important receive the majority of conservation investments, often...... facilitating further research that results in more species discoveries. Here, we test whether there is circularity between funding and perceived biodiversity, which may reinforce the conservation status of areas already perceived to be important while other areas with less initial funding may remain overlooked......, and variances decomposed in partial regressions. Cross-correlations are used to assess whether perceived biodiversity drives funding or vice versa. Results Funding explained 65% of variation in perceived biodiversity patterns – six times more variation than accounted for by 34 candidate environmental factors...

Horizon scanning for invasive alien species with the potential to threaten biodiversity in Great Britain.

Science.gov (United States)

Roy, Helen E; Peyton, Jodey; Aldridge, David C; Bantock, Tristan; Blackburn, Tim M; Britton, Robert; Clark, Paul; Cook, Elizabeth; Dehnen-Schmutz, Katharina; Dines, Trevor; Dobson, Michael; Edwards, François; Harrower, Colin; Harvey, Martin C; Minchin, Dan; Noble, David G; Parrott, Dave; Pocock, Michael J O; Preston, Chris D; Roy, Sugoto; Salisbury, Andrew; Schönrogge, Karsten; Sewell, Jack; Shaw, Richard H; Stebbing, Paul; Stewart, Alan J A; Walker, Kevin J

2014-12-01

Invasive alien species (IAS) are considered one of the greatest threats to biodiversity, particularly through their interactions with other drivers of change. Horizon scanning, the systematic examination of future potential threats and opportunities, leading to prioritization of IAS threats is seen as an essential component of IAS management. Our aim was to consider IAS that were likely to impact on native biodiversity but were not yet established in the wild in Great Britain. To achieve this, we developed an approach which coupled consensus methods (which have previously been used for collaboratively identifying priorities in other contexts) with rapid risk assessment. The process involved two distinct phases: Preliminary consultation with experts within five groups (plants, terrestrial invertebrates, freshwater invertebrates, vertebrates and marine species) to derive ranked lists of potential IAS. Consensus-building across expert groups to compile and rank the entire list of potential IAS. Five hundred and ninety-one species not native to Great Britain were considered. Ninety-three of these species were agreed to constitute at least a medium risk (based on score and consensus) with respect to them arriving, establishing and posing a threat to native biodiversity. The quagga mussel, Dreissena rostriformis bugensis, received maximum scores for risk of arrival, establishment and impact; following discussions the unanimous consensus was to rank it in the top position. A further 29 species were considered to constitute a high risk and were grouped according to their ranked risk. The remaining 63 species were considered as medium risk, and included in an unranked long list. The information collated through this novel extension of the consensus method for horizon scanning provides evidence for underpinning and prioritizing management both for the species and, perhaps more importantly, their pathways of arrival. Although our study focused on Great Britain, we suggest

A General Business Model for Marine Reserves

Science.gov (United States)

Sala, Enric; Costello, Christopher; Dougherty, Dawn; Heal, Geoffrey; Kelleher, Kieran; Murray, Jason H.; Rosenberg, Andrew A.; Sumaila, Rashid

2013-01-01

Marine reserves are an effective tool for protecting biodiversity locally, with potential economic benefits including enhancement of local fisheries, increased tourism, and maintenance of ecosystem services. However, fishing communities often fear short-term income losses associated with closures, and thus may oppose marine reserves. Here we review empirical data and develop bioeconomic models to show that the value of marine reserves (enhanced adjacent fishing + tourism) may often exceed the pre-reserve value, and that economic benefits can offset the costs in as little as five years. These results suggest the need for a new business model for creating and managing reserves, which could pay for themselves and turn a profit for stakeholder groups. Our model could be expanded to include ecosystem services and other benefits, and it provides a general framework to estimate costs and benefits of reserves and to develop such business models. PMID:23573192

Status of marine protected areas in Egypt

Directory of Open Access Journals (Sweden)

Samy, M.

2011-06-01

Full Text Available Egypt has sought to protect its natural resources and marine biodiversity by establishing a network of six MPAs that are generally located in the Gulf of Aqaba and the Red Sea; most of them include interconnected marine and terrestrial sectors based on conserving coral reefs and accompanying systems. We assessed the present status of MPA networks that showed a set of important results manifested in some strengths (i.e. proper selection according to specific criteria, management plans, etc., and also some weaknesses (i.e. a relatively small protected proportion of the Egyptian marine territorial waters, significant pressures mainly by tourism activities, etc.. Finally, some recommendations are proposed from this work (i.e. incorporate more habitats that are not well represented in the network, especially on the Mediterranean Sea; establishing a touristic carrying capacity of each area; etc. to improve the current situation.

Looking for hotspots of marine metacommunity connectivity: a methodological framework

Science.gov (United States)

Melià, Paco; Schiavina, Marcello; Rossetto, Marisa; Gatto, Marino; Fraschetti, Simonetta; Casagrandi, Renato

2016-03-01

Seascape connectivity critically affects the spatiotemporal dynamics of marine metacommunities. Understanding how connectivity patterns emerge from physically and biologically-mediated interactions is therefore crucial to conserve marine ecosystem functions and biodiversity. Here, we develop a set of biophysical models to explore connectivity in assemblages of species belonging to a typical Mediterranean community (Posidonia oceanica meadows) and characterized by different dispersing traits. We propose a novel methodological framework to synthesize species-specific results into a set of community connectivity metrics and show that spatiotemporal variation in magnitude and direction of the connections, as well as interspecific differences in dispersing traits, are key factors structuring community connectivity. We eventually demonstrate how these metrics can be used to characterize the functional role of each marine area in determining patterns of community connectivity at the basin level and to support marine conservation planning.

Status of marine pollution research in South Africa (1960-present).

Science.gov (United States)

Wepener, V; Degger, N

2012-07-01

The published literature on marine pollution monitoring research in South Africa from 1960 to present was evaluated. There has been a general decline in the number of papers from the 1980s and this can be linked to the absence of a marine pollution monitoring programme in South Africa. General trends observed were that contaminant exposure monitoring of metals predominates the research conducted to date. Monitoring results indicate that there has been a general decrease in metal concentrations in South African coastal waters and concentrations of metals and most organics in mussels are lower than in other industrialised nations. This is reflected in the general pristine nature and high biodiversity of the South African coastline. The establishment of a national marine pollution monitoring framework would stimulate marine pollution research. Copyright © 2012 Elsevier Ltd. All rights reserved.

Enhancing Teacher and Student Engagement and Understanding of Marine Science Through Classroom Citizen Science Projects

Science.gov (United States)

Goodale, T. A.

2016-02-01

Overview This paper presentation shares findings from a granted funded project that sought to expand teacher content knowledge and pedagogy within the fields of marine science and coastal resource management through the implementation of classroom citizen science projects. A secondary goal was to increase middle and high school student interest and participation in marine science and natural resources research. Background A local science & engineering fair has seen a rapid decline in secondary student participants in the past four years. Research has demonstrated that when students are a part of a system of knowledge production (citizen science) they become much more aware, involved and conscious of scientific concepts compared to traditional school laboratory and nature of science activities. This project's primary objectives were to: (a) enhance teacher content expertise in marine science, (b) enrich teacher professional learning, (c) support citizen science classroom projects and inspire student activism and marine science engagement. Methods Project goals were addressed through classroom and meaningful outdoor educational experiences that put content knowledge into field based practices. Teachers learned to apply thier expanded content knowlege through classroom citizen science projects that focus on marine resource conservation issues such as fisheries management, water quality, turtle nesting and biodiversity of coastal ecosystems. These projects would eventually become potential topics of citizen science research topics for their students to pursue. Upon completion of their professional development, participants were urged to establish student Marine Science clubs with the goal of mentoring student submissions into the local science fair. Supplemental awards were possible for the students of project participants. Findings Based on project measures participants significantly increased their knowledge and awareness of presented material marine science and

Comment on "Neutral ecological theory reveals isolation and rapid speciation in a biodiversity hot spot"

NARCIS (Netherlands)

Etienne, RS; Latimer, AM; Silander, JA; Cowling, RM

2006-01-01

Latimer et at. (Reports, 9 September 2005, p. 1722) used an approximate likelihood function to estimate parameters of Hubbell's neutral model of biodiversity. Reanalysis with the exact likelihood not only yields different estimates but also shows that two similar likelihood maxima for very different

Real-time DNA barcoding in a rainforest using nanopore sequencing: opportunities for rapid biodiversity assessments and local capacity building.

Science.gov (United States)

Pomerantz, Aaron; Peñafiel, Nicolás; Arteaga, Alejandro; Bustamante, Lucas; Pichardo, Frank; Coloma, Luis A; Barrio-Amorós, César L; Salazar-Valenzuela, David; Prost, Stefan

2018-04-01

Advancements in portable scientific instruments provide promising avenues to expedite field work in order to understand the diverse array of organisms that inhabit our planet. Here, we tested the feasibility for in situ molecular analyses of endemic fauna using a portable laboratory fitting within a single backpack in one of the world's most imperiled biodiversity hotspots, the Ecuadorian Chocó rainforest. We used portable equipment, including the MinION nanopore sequencer (Oxford Nanopore Technologies) and the miniPCR (miniPCR), to perform DNA extraction, polymerase chain reaction amplification, and real-time DNA barcoding of reptile specimens in the field. We demonstrate that nanopore sequencing can be implemented in a remote tropical forest to quickly and accurately identify species using DNA barcoding, as we generated consensus sequences for species resolution with an accuracy of >99% in less than 24 hours after collecting specimens. The flexibility of our mobile laboratory further allowed us to generate sequence information at the Universidad Tecnológica Indoamérica in Quito for rare, endangered, and undescribed species. This includes the recently rediscovered Jambato toad, which was thought to be extinct for 28 years. Sequences generated on the MinION required as few as 30 reads to achieve high accuracy relative to Sanger sequencing, and with further multiplexing of samples, nanopore sequencing can become a cost-effective approach for rapid and portable DNA barcoding. Overall, we establish how mobile laboratories and nanopore sequencing can help to accelerate species identification in remote areas to aid in conservation efforts and be applied to research facilities in developing countries. This opens up possibilities for biodiversity studies by promoting local research capacity building, teaching nonspecialists and students about the environment, tackling wildlife crime, and promoting conservation via research-focused ecotourism.

Characterizing Marine Soundscapes.

Science.gov (United States)

Erbe, Christine; McCauley, Robert; Gavrilov, Alexander

2016-01-01

The study of marine soundscapes is becoming widespread and the amount of data collected is increasing rapidly. Data owners (typically academia, industry, government, and defense) are negotiating data sharing and generating potential for data syntheses, comparative studies, analyses of trends, and large-scale and long-term acoustic ecology research. A problem is the lack of standards and commonly agreed protocols for the recording of marine soundscapes, data analysis, and reporting that make a synthesis and comparison of results difficult. We provide a brief overview of the components in a marine soundscape, the hard- and software tools for recording and analyzing marine soundscapes, and common reporting formats.

Biodiversity and Climate Modeling Workshop Series: Identifying gaps and needs for improving large-scale biodiversity models

Science.gov (United States)

Weiskopf, S. R.; Myers, B.; Beard, T. D.; Jackson, S. T.; Tittensor, D.; Harfoot, M.; Senay, G. B.

2017-12-01

At the global scale, well-accepted global circulation models and agreed-upon scenarios for future climate from the Intergovernmental Panel on Climate Change (IPCC) are available. In contrast, biodiversity modeling at the global scale lacks analogous tools. While there is great interest in development of similar bodies and efforts for international monitoring and modelling of biodiversity at the global scale, equivalent modelling tools are in their infancy. This lack of global biodiversity models compared to the extensive array of general circulation models provides a unique opportunity to bring together climate, ecosystem, and biodiversity modeling experts to promote development of integrated approaches in modeling global biodiversity. Improved models are needed to understand how we are progressing towards the Aichi Biodiversity Targets, many of which are not on track to meet the 2020 goal, threatening global biodiversity conservation, monitoring, and sustainable use. We brought together biodiversity, climate, and remote sensing experts to try to 1) identify lessons learned from the climate community that can be used to improve global biodiversity models; 2) explore how NASA and other remote sensing products could be better integrated into global biodiversity models and 3) advance global biodiversity modeling, prediction, and forecasting to inform the Aichi Biodiversity Targets, the 2030 Sustainable Development Goals, and the Intergovernmental Platform on Biodiversity and Ecosystem Services Global Assessment of Biodiversity and Ecosystem Services. The 1st In-Person meeting focused on determining a roadmap for effective assessment of biodiversity model projections and forecasts by 2030 while integrating and assimilating remote sensing data and applying lessons learned, when appropriate, from climate modeling. Here, we present the outcomes and lessons learned from our first E-discussion and in-person meeting and discuss the next steps for future meetings.

Molecular Architecture and Biomedical Leads of Terpenes from Red Sea Marine Invertebrates

Science.gov (United States)

Hegazy, Mohamed Elamir F.; Mohamed, Tarik A.; Alhammady, Montaser A.; Shaheen, Alaa M.; Reda, Eman H.; Elshamy, Abdelsamed I.; Aziz, Mina; Paré, Paul W.

2015-01-01

Marine invertebrates including sponges, soft coral, tunicates, mollusks and bryozoan have proved to be a prolific source of bioactive natural products. Among marine-derived metabolites, terpenoids have provided a vast array of molecular architectures. These isoprenoid-derived metabolites also exhibit highly specialized biological activities ranging from nerve regeneration to blood-sugar regulation. As a result, intense research activity has been devoted to characterizing invertebrate terpenes from both a chemical and biological standpoint. This review focuses on the chemistry and biology of terpene metabolites isolated from the Red Sea ecosystem, a unique marine biome with one of the highest levels of biodiversity and specifically rich in invertebrate species. PMID:26006713

Molecular Architecture and Biomedical Leads of Terpenes from Red Sea Marine Invertebrates

Directory of Open Access Journals (Sweden)

Mohamed Elamir F. Hegazy

2015-05-01

Full Text Available Marine invertebrates including sponges, soft coral, tunicates, mollusks and bryozoan have proved to be a prolific source of bioactive natural products. Among marine-derived metabolites, terpenoids have provided a vast array of molecular architectures. These isoprenoid-derived metabolites also exhibit highly specialized biological activities ranging from nerve regeneration to blood-sugar regulation. As a result, intense research activity has been devoted to characterizing invertebrate terpenes from both a chemical and biological standpoint. This review focuses on the chemistry and biology of terpene metabolites isolated from the Red Sea ecosystem, a unique marine biome with one of the highest levels of biodiversity and specifically rich in invertebrate species.

Biodiversity and Climate Change

International Nuclear Information System (INIS)

Onyango, J.C.O.; Ojoo-Massawa, E.; Abira, M.A.

1997-01-01

Biological diversity or biodiversity is crucial for ecological stability including regulation of climate change, recreational and medicinal use; and scientific advancement. Kenya like other developing countries, especially, those in Sub-Saharan Africa, will continue to depend greatly on her biodiversity for present and future development. This important resource must, therefore be conserved. This chapter presents an overview of Kenya's biodiversity; its importance and initiatives being undertaken for its conservation; and in detail, explores issues of climate change and biodiversity, concentrating on impacts of climate change

Understanding and protecting the world's biodiversity: the role and legacy of the SCAR programme "Evolution and Biodiversity in the Antarctic".

Science.gov (United States)

di Prisco, Guido; Convey, Peter; Gutt, Julian; Cowan, Don; Conlan, Kathleen; Verde, Cinzia

2012-12-01

Current global changes are prompting scientists and governments to consider the risk of extinction of species inhabiting environments influenced by ice. Concerted, multidisciplinary, international programmes aimed at understanding life processes, evolution and adaptations in the Polar Regions will help to counteract such an event by protecting polar life and ecosystems. There is a long tradition of international scientific cooperation in Antarctica that provides a strong foundation for such approaches. While basic understanding is emerging, we still largely lack predictive biological models, and need to achieve further integration amongst biological and non-biological disciplines. The ongoing SCAR Science Research Programme, "Evolution and Biodiversity in the Antarctic (EBA)" has successfully carried out its crucial role of providing an overarching umbrella for SCAR research in Life Sciences. Now is the time for aiming to progress beyond this important role, and the Antarctic biology community is proposing two programmes, focussed on distinct but complementary aspects of polar biology and working across marine, freshwater and terrestrial environments: "State of the Antarctic Ecosystem (AntEco)", and "Antarctic Thresholds--Ecosystem Resilience and Adaptation (AnT-ERA)". These programmes are the legacy of EBA, and they are key to understanding and protect Antarctic biodiversity. Copyright © 2012 Elsevier B.V. All rights reserved.

Incentivizing biodiversity conservation in artisanal fishing communities through territorial user rights and business model innovation.

Science.gov (United States)

Gelcich, Stefan; Donlan, C Josh

2015-08-01

Territorial user rights for fisheries are being promoted to enhance the sustainability of small-scale fisheries. Using Chile as a case study, we designed a market-based program aimed at improving fishers' livelihoods while incentivizing the establishment and enforcement of no-take areas within areas managed with territorial user right regimes. Building on explicit enabling conditions (i.e., high levels of governance, participation, and empowerment), we used a place-based, human-centered approach to design a program that will have the necessary support and buy-in from local fishers to result in landscape-scale biodiversity benefits. Transactional infrastructure must be complex enough to capture the biodiversity benefits being created, but simple enough so that the program can be scaled up and is attractive to potential financiers. Biodiversity benefits created must be commoditized, and desired behavioral changes must be verified within a transactional context. Demand must be generated for fisher-created biodiversity benefits in order to attract financing and to scale the market model. Important design decisions around these 3 components-supply, transactional infrastructure, and demand-must be made based on local social-ecological conditions. Our market model, which is being piloted in Chile, is a flexible foundation on which to base scalable opportunities to operationalize a scheme that incentivizes local, verifiable biodiversity benefits via conservation behaviors by fishers that could likely result in significant marine conservation gains and novel cross-sector alliances. © 2015, Society for Conservation Biology.

Biodiverse planting for carbon and biodiversity on indigenous land.

Science.gov (United States)

Renwick, Anna R; Robinson, Catherine J; Martin, Tara G; May, Tracey; Polglase, Phil; Possingham, Hugh P; Carwardine, Josie

2014-01-01

Carbon offset mechanisms have been established to mitigate climate change through changes in land management. Regulatory frameworks enable landowners and managers to generate saleable carbon credits on domestic and international markets. Identifying and managing the associated co-benefits and dis-benefits involved in the adoption of carbon offset projects is important for the projects to contribute to the broader goal of sustainable development and the provision of benefits to the local communities. So far it has been unclear how Indigenous communities can benefit from such initiatives. We provide a spatial analysis of the carbon and biodiversity potential of one offset method, planting biodiverse native vegetation, on Indigenous land across Australia. We discover significant potential for opportunities for Indigenous communities to achieve carbon sequestration and biodiversity goals through biodiverse plantings, largely in southern and eastern Australia, but the economic feasibility of these projects depend on carbon market assumptions. Our national scale cost-effectiveness analysis is critical to enable Indigenous communities to maximise the benefits available to them through participation in carbon offset schemes.

Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species.

Science.gov (United States)

Holbrook, Sally J; Schmitt, Russell J; Messmer, Vanessa; Brooks, Andrew J; Srinivasan, Maya; Munday, Philip L; Jones, Geoffrey P

2015-01-01

Coral reef ecosystems are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of coral species on reefs. Coral reefs support upwards of one third of all marine species of fish, so the loss of coral habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in coral regions with highest biodiversity of fishes due to greater specialization by fishes for particular coral habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier Reef, Australia; French Polynesia). Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing corals was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity) in fish biodiversity to loss of coral diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of ecosystems.

Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species.

Directory of Open Access Journals (Sweden)

Sally J Holbrook

Full Text Available Coral reef ecosystems are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of coral species on reefs. Coral reefs support upwards of one third of all marine species of fish, so the loss of coral habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in coral regions with highest biodiversity of fishes due to greater specialization by fishes for particular coral habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier Reef, Australia; French Polynesia. Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing corals was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity in fish biodiversity to loss of coral diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of ecosystems.

Rapid Reactivation of Cyanobacterial Photosynthesis and Migration upon Rehydration of Desiccated Marine Microbial Mats

KAUST Repository

Chennu, Arjun

2015-12-24

Desiccated cyanobacterial mats are the dominant biological feature in the Earth’s arid zones. While the response of desiccated cyanobacteria to rehydration is well-documented for terrestrial systems, information about the response in marine systems is lacking. We used high temporal resolution hyperspectral imaging, liquid chromatography, pulse-amplitude fluorometry, oxygen microsensors, and confocal laser microscopy to study this response in a desiccated microbial mat from Exmouth Gulf, Australia. During the initial 15 min after rehydration chlorophyll a concentrations increased 2–5 fold and cyanobacterial photosynthesis was re-established. Although the mechanism behind this rapid increase of chlorophyll a remains unknown, we hypothesize that it involves resynthesis from a precursor stored in desiccated cyanobacteria. The subsequent phase (15 min–48 h) involved migration of the reactivated cyanobacteria toward the mat surface, which led, together with a gradual increase in chlorophyll a, to a further increase in photosynthesis. We conclude that the response involving an increase in chlorophyll a and recovery of photosynthetic activity within minutes after rehydration is common for cyanobacteria from desiccated mats of both terrestrial and marine origin. However, the response of upward migration and its triggering factor appear to be mat-specific and likely linked to other factors.

Rapid Reactivation of Cyanobacterial Photosynthesis and Migration upon Rehydration of Desiccated Marine Microbial Mats

KAUST Repository

Chennu, Arjun; Grinham, Alistair; Polerecky, Lubos; de Beer, Dirk; Alnajjar, Mohammad Ahmad

2015-01-01

Desiccated cyanobacterial mats are the dominant biological feature in the Earth’s arid zones. While the response of desiccated cyanobacteria to rehydration is well-documented for terrestrial systems, information about the response in marine systems is lacking. We used high temporal resolution hyperspectral imaging, liquid chromatography, pulse-amplitude fluorometry, oxygen microsensors, and confocal laser microscopy to study this response in a desiccated microbial mat from Exmouth Gulf, Australia. During the initial 15 min after rehydration chlorophyll a concentrations increased 2–5 fold and cyanobacterial photosynthesis was re-established. Although the mechanism behind this rapid increase of chlorophyll a remains unknown, we hypothesize that it involves resynthesis from a precursor stored in desiccated cyanobacteria. The subsequent phase (15 min–48 h) involved migration of the reactivated cyanobacteria toward the mat surface, which led, together with a gradual increase in chlorophyll a, to a further increase in photosynthesis. We conclude that the response involving an increase in chlorophyll a and recovery of photosynthetic activity within minutes after rehydration is common for cyanobacteria from desiccated mats of both terrestrial and marine origin. However, the response of upward migration and its triggering factor appear to be mat-specific and likely linked to other factors.

Marine biodiversity in South Africa: an evaluation of current states of knowledge.

Directory of Open Access Journals (Sweden)

Charles L Griffiths

Full Text Available Continental South Africa has a coastline of some 3,650 km and an Exclusive Economic Zone (EEZ of just over 1 million km(2. Waters in the EEZ extend to a depth of 5,700 m, with more than 65% deeper than 2,000 m. Despite its status as a developing nation, South Africa has a relatively strong history of marine taxonomic research and maintains comprehensive and well-curated museum collections totaling over 291,000 records. Over 3 million locality records from more than 23,000 species have been lodged in the regional AfrOBIS (African Ocean Biogeographic Information System data center (which stores data from a wider African region. A large number of regional guides to the marine fauna and flora are also available and are listed. The currently recorded marine biota of South Africa numbers at least 12,914 species, although many taxa, particularly those of small body size, remain poorly documented. The coastal zone is relatively well sampled with some 2,500 samples of benthic invertebrate communities have been taken by grab, dredge, or trawl. Almost none of these samples, however, were collected after 1980, and over 99% of existing samples are from depths shallower than 1,000 m--indeed 83% are from less than 100 m. The abyssal zone thus remains almost completely unexplored. South Africa has a fairly large industrial fishing industry, of which the largest fisheries are the pelagic (pilchard and anchovy and demersal (hake sectors, both focused on the west and south coasts. The east coast has fewer, smaller commercial fisheries, but a high coastal population density, resulting in intense exploitation of inshore resources by recreational and subsistence fishers, and this has resulted in the overexploitation of many coastal fish and invertebrate stocks. South Africa has a small aquaculture industry rearing mussels, oysters, prawns, and abalone-the latter two in land-based facilities. Compared with many other developing countries, South Africa has a well

Spatial and temporal benthic species assemblage responses with a deployed marine tidal energy device: a small scaled study.

Science.gov (United States)

Broadhurst, Melanie; Orme, C David L

2014-08-01

The addition of man-made structures to the marine environment is known to increase the physical complexity of the seafloor, which can influence benthic species community patterns and habitat structure. However, knowledge of how deployed tidal energy device structures influence benthic communities is currently lacking. Here we examined species biodiversity, composition and habitat type surrounding a tidal energy device within the European Marine Energy Centre test site, Orkney. Commercial fishing and towed video camera techniques were used over three temporal periods, from 2009 to 2010. Our results showed increased species biodiversity and compositional differences within the device site, compared to a control site. Both sites largely comprised of crustacean species, omnivore or predatory feeding regimes and marine tide-swept EUNIS habitat types, which varied over the time. We conclude that the device could act as a localised artificial reef structure, but that further in-depth investigations are required. Copyright © 2014 Elsevier Ltd. All rights reserved.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem

2016-06-27

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

Science.gov (United States)

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Fernández de Puelles, María L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Veríssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-06-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Ferná ndez de Puelles, Marí a L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Verí ssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-01-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

PARTICULARITIES AND THREATS ON THE BIODIVERSITY FROM CROATIA

Directory of Open Access Journals (Sweden)

Andreea BĂLTĂREŢU

2010-12-01

Full Text Available Because it has a specific geographic position and it’s situated at the crossroads of several bio-geographical regions and as a result of its ecological characteristics, the climate and geo-morphological conditions, Croatia is one of the wealthiest countries from Europe concerning the biodiversity. The great variety of the territory, maritime and underground habitats has determined the existence of numerous species and subspecies, including a significant number of endemic species. Although the climate of Croatia has a great value, many of its components are threatened. The most important threats of wild species are losing the habitats and the degradation. Because of its shape and its position in Europe, Croatia has very rich landscape diversity. Croatia contains significant populations of many species that are threatened at the European level. These are connected to preserved large areas of their habitats. Vast mountain beech and fir forests are rich in bear, wolf and lynx populations. Large wetland complexes with alluvial forests are important breeding, the migration and wintering sites for European water birds and for wetland birds nesting in forests. The wealth of marine biodiversity, in combination with the immense diversity of islands and cliffs with endemic life forms, gives the Croatian coastal area international significance.

Marine bioacoustics and technology: The new world of marine acoustic ecology

Science.gov (United States)

Hastings, Mardi C.; Au, Whitlow W. L.

2012-11-01

Marine animals use sound for communication, navigation, predator avoidance, and prey detection. Thus the rise in acoustic energy associated with increasing human activity in the ocean has potential to impact the lives of marine animals. Thirty years ago marine bioacoustics primarily focused on evaluating effects of human-generated sound on hearing and behavior by testing captive animals and visually observing wild animals. Since that time rapidly changing electronic and computing technologies have yielded three tools that revolutionized how bioacousticians study marine animals. These tools are (1) portable systems for measuring electrophysiological auditory evoked potentials, (2) miniaturized tags equipped with positioning sensors and acoustic recording devices for continuous short-term acoustical observation rather than intermittent visual observation, and (3) passive acoustic monitoring (PAM) systems for remote long-term acoustic observations at specific locations. The beauty of these breakthroughs is their direct applicability to wild animals in natural habitats rather than only to animals held in captivity. Hearing capabilities of many wild species including polar bears, beaked whales, and reef fishes have now been assessed by measuring their auditory evoked potentials. Miniaturized acoustic tags temporarily attached to an animal to record its movements and acoustic environment have revealed the acoustic foraging behavior of sperm and beaked whales. Now tags are being adapted to fishes in effort to understand their behavior in the presence of noise. Moving and static PAM systems automatically detect and characterize biological and physical features of an ocean area without adding any acoustic energy to the environment. PAM is becoming a powerful technique for understanding and managing marine habitats. This paper will review the influence of these transformative tools on the knowledge base of marine bioacoustics and elucidation of relationships between marine

The Biodiversity Informatics Potential Index

Science.gov (United States)

2011-01-01

Background Biodiversity informatics is a relatively new discipline extending computer science in the context of biodiversity data, and its development to date has not been uniform throughout the world. Digitizing effort and capacity building are costly, and ways should be found to prioritize them rationally. The proposed 'Biodiversity Informatics Potential (BIP) Index' seeks to fulfill such a prioritization role. We propose that the potential for biodiversity informatics be assessed through three concepts: (a) the intrinsic biodiversity potential (the biological richness or ecological diversity) of a country; (b) the capacity of the country to generate biodiversity data records; and (c) the availability of technical infrastructure in a country for managing and publishing such records. Methods Broadly, the techniques used to construct the BIP Index were rank correlation, multiple regression analysis, principal components analysis and optimization by linear programming. We built the BIP Index by finding a parsimonious set of country-level human, economic and environmental variables that best predicted the availability of primary biodiversity data accessible through the Global Biodiversity Information Facility (GBIF) network, and constructing an optimized model with these variables. The model was then applied to all countries for which sufficient data existed, to obtain a score for each country. Countries were ranked according to that score. Results Many of the current GBIF participants ranked highly in the BIP Index, although some of them seemed not to have realized their biodiversity informatics potential. The BIP Index attributed low ranking to most non-participant countries; however, a few of them scored highly, suggesting that these would be high-return new participants if encouraged to contribute towards the GBIF mission of free and open access to biodiversity data. Conclusions The BIP Index could potentially help in (a) identifying countries most likely to

Essential Biodiversity Variables: A framework for communication between the biodiversity community and space agencies

Science.gov (United States)

Leidner, A. K.; Skidmore, A. K.; Turner, W. W.; Geller, G. N.

2017-12-01

The biodiversity community is working towards developing a consensus on a set of Essential Biodiversity Variables (EBVs) that can be used to measure and monitor biodiversity change over time. These EBVs will inform research, modeling, policy, and assessment efforts. The synoptic coverage provided by satellite data make remote sensing a particularly important observation tool to inform many EBVs. Biodiversity is a relatively new subject matter for space agencies, and thus the definition, description, and requirements of EBVs with a significant remote sensing component can foster ways for the biodiversity community to clearly and concisely communicate observational needs to space agencies and the Committee on Earth Observing Satellites (CEOS, the international coordinating body for civilian space agencies). Here, we present an overview of EBVs with a particular emphasis on those for which remote sensing will play a significant role and also report on the results of recent workshops to prioritize and refine EBVs. Our goal is to provide a framework for the biodiversity community to coalesce around a set of observational needs to convey to space agencies. Compared to many physical science disciplines, the biodiversity community represents a wide range of sub-disciplines and organizations (academia, non-governmental organizations, research institutes, national and local natural resource management agencies, etc.), which creates additional challenges when communicating needs to space agencies unfamiliar with the topic. EBVs thus offer a communication pathway that could increase awareness within space agencies of the uses of remote sensing for biodiversity research and applications, which in turn could foster greater use of remote sensing in the broader biodiversity community.

Biodiversity conservation in a changing climate: a review of threats and implications for conservation planning in Myanmar.

Science.gov (United States)

Rao, Madhu; Saw Htun; Platt, Steven G; Tizard, Robert; Poole, Colin; Than Myint; Watson, James E M

2013-11-01

High levels of species richness and endemism make Myanmar a regional priority for conservation. However, decades of economic and political sanctions have resulted in low conservation investment to effectively tackle threats to biodiversity. Recent sweeping political reforms have placed Myanmar on the fast track to economic development-the expectation is increased economic investments focused on the exploitation of the country's rich, and relatively intact, natural resources. Within a context of weak regulatory capacity and inadequate environmental safeguards, rapid economic development is likely to have far-reaching negative implications for already threatened biodiversity and natural-resource-dependent human communities. Climate change will further exacerbate prevailing threats given Myanmar's high exposure and vulnerability. The aim of this review is to examine the implications of increased economic growth and a changing climate within the larger context of biodiversity conservation in Myanmar. We summarize conservation challenges, assess direct climatological impacts on biodiversity and conclude with recommendations for long-term adaptation approaches for biodiversity conservation.

DNA Extraction Protocols for Whole-Genome Sequencing in Marine Organisms.

Science.gov (United States)

Panova, Marina; Aronsson, Henrik; Cameron, R Andrew; Dahl, Peter; Godhe, Anna; Lind, Ulrika; Ortega-Martinez, Olga; Pereyra, Ricardo; Tesson, Sylvie V M; Wrange, Anna-Lisa; Blomberg, Anders; Johannesson, Kerstin

2016-01-01

The marine environment harbors a large proportion of the total biodiversity on this planet, including the majority of the earths' different phyla and classes. Studying the genomes of marine organisms can bring interesting insights into genome evolution. Today, almost all marine organismal groups are understudied with respect to their genomes. One potential reason is that extraction of high-quality DNA in sufficient amounts is challenging for many marine species. This is due to high polysaccharide content, polyphenols and other secondary metabolites that will inhibit downstream DNA library preparations. Consequently, protocols developed for vertebrates and plants do not always perform well for invertebrates and algae. In addition, many marine species have large population sizes and, as a consequence, highly variable genomes. Thus, to facilitate the sequence read assembly process during genome sequencing, it is desirable to obtain enough DNA from a single individual, which is a challenge in many species of invertebrates and algae. Here, we present DNA extraction protocols for seven marine species (four invertebrates, two algae, and a marine yeast), optimized to provide sufficient DNA quality and yield for de novo genome sequencing projects.

The effects of atmospheric nitrogen deposition on terrestrial and freshwater biodiversity

Science.gov (United States)

Baron, Jill S.; Barber, Mary C.; Adams, Mark; Agboola, Julius I.; Allen, Edith B.; Bealey, William J.; Bobbink, Roland; Bobrovsky, Maxim V.; Bowman, William D.; Branquinho, Cristina; Bustamente, Mercedes M. C.; Clark, Christopher M.; Cocking, Edward C.; Cruz, Cristina; Davidson, Eric A.; Denmead, O. Tom; Dias, Teresa; Dise, Nancy B.; Feest, Alan; Galloway, James N.; Geiser, Linda H.; Gilliam, Frank S.; Harrison, Ian J.; Khanina, Larisa G.; Lu, Xiankai; Manrique, Esteban; Ochoa-Hueso, Raul; Ometto, Jean P. H. B.; Payne, Richard; Scheuschner, Thomas; Sheppard, Lucy J.; Simpson, Gavin L.; Singh, Y. V.; Stevens, Carly J.; Strachan, Ian; Sverdrup, Harald; Tokuchi, Naoko; van Dobben, Hans; Woodin, Sarah

2014-01-01

This chapter reports the findings of a Working Group on how atmospheric nitrogen (N) deposition affects both terrestrial and freshwater biodiversity. Regional and global scale impacts on biodiversity are addressed, together with potential indicators. Key conclusions are that: the rates of loss in biodiversity are greatest at the lowest and initial stages of N deposition increase; changes in species compositions are related to the relative amounts of N, carbon (C) and phosphorus (P) in the plant soil system; enhanced N inputs have implications for C cycling; N deposition is known to be having adverse effects on European and North American vegetation composition; very little is known about tropical ecosystem responses, while tropical ecosystems are major biodiversity hotspots and are increasingly recipients of very high N deposition rates; N deposition alters forest fungi and mycorrhyzal relations with plants; the rapid response of forest fungi and arthropods makes them good indicators of change; predictive tools (models) that address ecosystem scale processes are necessary to address complex drivers and responses, including the integration of N deposition, climate change and land use effects; criteria can be identified for projecting sensitivity of terrestrial and aquatic ecosystems to N deposition. Future research and policy-relevant recommendations are identified.

Making the case for biodiversity in South Africa: Re-framing biodiversity communications

OpenAIRE

Maze, Kristal; Barnett, Mandy; Botts, Emily A.; Stephens, Anthea; Freedman, Mike; Guenther, Lars

2016-01-01

Background: Biodiversity education and public awareness do not always contain the motivational messages that inspire action amongst decision-makers. Traditional messages from the biodiversity sector are often framed around threat, with a generally pessimistic tone. Aspects of social marketing can be used to support positive messaging that is more likely to inspire action amongst the target audience. Objectives: The South African biodiversity sector embarked on a market research process to ...

Accumulation and retention of plutonium by marine zooplankton

International Nuclear Information System (INIS)

Fowler, S.W.; Heyraud, M.; Cherry, R.D.

1976-01-01

Recent studies suggest that plutonium entering the marine environment is rapidly depleted from surface waters and eventually becomes incorporated into marine sediments. The proposed mechanism for this removal is that plutonium rapidly becomes associated with biogenous particulate matter which, in turn, enhance the sedimentation rate of this radionuclide in the water column

Sources, factors, mechanisms and possible solutions to pollutants in marine ecosystems

International Nuclear Information System (INIS)

Mostofa, Khan M.G.; Liu, Cong-Qiang; Vione, Davide; Gao, Kunshan; Ogawa, Hiroshi

2013-01-01

Algal toxins or red-tide toxins produced during algal blooms are naturally-derived toxic emerging contaminants (ECs) that may kill organisms, including humans, through contaminated fish or seafood. Other ECs produced either naturally or anthropogenically ultimately flow into marine waters. Pharmaceuticals are also an important pollution source, mostly due to overproduction and incorrect disposal. Ship breaking and recycle industries (SBRIs) can also release various pollutants and substantially deteriorate habitats and marine biodiversity. Overfishing is significantly increasing due to the global food crisis, caused by an increasing world population. Organic matter (OM) pollution and global warming (GW) are key factors that exacerbate these challenges (e.g. algal blooms), to which acidification in marine waters should be added as well. Sources, factors, mechanisms and possible remedial measures of these challenges to marine ecosystems are discussed, including their eventual impact on all forms of life including humans. -- Review of sources, factors, mechanisms and possible remedial measures of key pollutants (contaminants, toxins, ship breaking, overfishing) in marine ecosystems

Local Stakeholder Perception on Community Participation in Marine Protected Area Management: A Q-Method Approach

Science.gov (United States)

Megat Jamual Fawaeed, P. S.; Daim, M. S.

2018-02-01

Local stakeholder involvement in Marine Protected Area (MPA) management can bring to a successful MPA. Generally, participatory research in marine protected area management is exploring the relationship between marine protected area management approach adopted by the management agencies and the level of participation of local stakeholder whom reside within the marine protected areas. However, the scenario of local community participation in MPA management in Malaysia seems discouraging and does not align with the International Aichi Biodiversity Target 2020. In order to achieve the International Aichi Biodiversity Target 2020, this paper attempts to explore the methodology on participatory research towards the local stakeholder of Pulau Perhentian Marine Park (PPMP), Terengganu, Malaysia. A Q-methodology is used to investigate the perspective of local stakeholder who represents different stances on the issues, by having participants rank and sort a series of statements by comply quantitative and qualitative method in collecting the data. A structured questionnaire will be employed across this study by means of face-to-face interview. In total, 210 respondents from Kampung Pasir Hantu are randomly selected. Meanwhile, a workshop with the agency (Department of Marine Park) had been held to discuss about the issues faces on behalf of management that manage the PPMP. Using the Q-method, researcher acknowledged wise viewpoints, reflecting how different stakeholders’ perception and opinion about community participation with highlights the current level of community participation in MPA. Thus, this paper describes the phases involved in this study, methodology and analysis used in making a conclusion .

Reconciling biodiversity and carbon conservation.

Science.gov (United States)

Thomas, Chris D; Anderson, Barbara J; Moilanen, Atte; Eigenbrod, Felix; Heinemeyer, Andreas; Quaife, Tristan; Roy, David B; Gillings, Simon; Armsworth, Paul R; Gaston, Kevin J

2013-05-01

Climate change is leading to the development of land-based mitigation and adaptation strategies that are likely to have substantial impacts on global biodiversity. Of these, approaches to maintain carbon within existing natural ecosystems could have particularly large benefits for biodiversity. However, the geographical distributions of terrestrial carbon stocks and biodiversity differ. Using conservation planning analyses for the New World and Britain, we conclude that a carbon-only strategy would not be effective at conserving biodiversity, as have previous studies. Nonetheless, we find that a combined carbon-biodiversity strategy could simultaneously protect 90% of carbon stocks (relative to a carbon-only conservation strategy) and > 90% of the biodiversity (relative to a biodiversity-only strategy) in both regions. This combined approach encapsulates the principle of complementarity, whereby locations that contain different sets of species are prioritised, and hence disproportionately safeguard localised species that are not protected effectively by carbon-only strategies. It is efficient because localised species are concentrated into small parts of the terrestrial land surface, whereas carbon is somewhat more evenly distributed; and carbon stocks protected in one location are equivalent to those protected elsewhere. Efficient compromises can only be achieved when biodiversity and carbon are incorporated together within a spatial planning process. © 2012 John Wiley & Sons Ltd/CNRS.

Uranium isotope evidence for an expansion of marine anoxia during the end-Triassic extinction

Science.gov (United States)

Jost, Adam B.; Bachan, Aviv; van de Schootbrugge, Bas; Lau, Kimberly V.; Weaver, Karrie L.; Maher, Kate; Payne, Jonathan L.

2017-08-01

The end-Triassic extinction coincided with an increase in marine black shale deposition and biomarkers for photic zone euxinia, suggesting that anoxia played a role in suppressing marine biodiversity. However, global changes in ocean anoxia are difficult to quantify using proxies for local anoxia. Uranium isotopes (δ238U) in CaCO3 sediments deposited under locally well-oxygenated bottom waters can passively track seawater δ238U, which is sensitive to the global areal extent of seafloor anoxia due to preferential reduction of 238U(VI) relative to 235U(VI) in anoxic marine sediments. We measured δ238U in shallow-marine limestones from two stratigraphic sections in the Lombardy Basin, northern Italy, spanning over 400 m. We observe a ˜0.7‰ negative excursion in δ238U beginning in the lowermost Jurassic, coeval with the onset of the initial negative δ13C excursion and persisting for the duration of subsequent high δ13C values in the lower-middle Hettangian stage. The δ238U excursion cannot be realistically explained by local mixing of uranium in primary marine carbonate and reduced authigenic uranium. Based on output from a forward model of the uranium cycle, the excursion is consistent with a 40-100-fold increase in the extent of anoxic deposition occurring worldwide. Additionally, relatively constant uranium concentrations point toward increased uranium delivery to the oceans from continental weathering, which is consistent with weathering-induced eutrophication following the rapid increase in pCO2 during emplacement of the Central Atlantic Magmatic Province. The relative timing and duration of the excursion in δ238U implies that anoxia could have delayed biotic recovery well into the Hettangian stage.

Species richness accelerates marine ecosystem restoration in the Coral Triangle.

Science.gov (United States)

Williams, Susan L; Ambo-Rappe, Rohani; Sur, Christine; Abbott, Jessica M; Limbong, Steven R

2017-11-07

Ecosystem restoration aims to restore biodiversity and valuable functions that have been degraded or lost. The Coral Triangle is a hotspot for marine biodiversity held in its coral reefs, seagrass meadows, and mangrove forests, all of which are in global decline. These coastal ecosystems support valuable fisheries and endangered species, protect shorelines, and are significant carbon stores, functions that have been degraded by coastal development, destructive fishing practices, and climate change. Ecosystem restoration is required to mitigate these damages and losses, but its practice is in its infancy in the region. Here we demonstrate that species diversity can set the trajectory of restoration. In a seagrass restoration experiment in the heart of the Coral Triangle (Sulawesi, Indonesia), plant survival and coverage increased with the number of species transplanted. Our results highlight the positive role biodiversity can play in ecosystem restoration and call for revision of the common restoration practice of establishing a single target species, particularly in regions having high biodiversity. Coastal ecosystems affect human well-being in many important ways, and restoration will become ever more important as conservation efforts cannot keep up with their loss. Published under the PNAS license.

B-HIT - A Tool for Harvesting and Indexing Biodiversity Data.

Directory of Open Access Journals (Sweden)

Patricia Kelbert

Full Text Available With the rapidly growing number of data publishers, the process of harvesting and indexing information to offer advanced search and discovery becomes a critical bottleneck in globally distributed primary biodiversity data infrastructures. The Global Biodiversity Information Facility (GBIF implemented a Harvesting and Indexing Toolkit (HIT, which largely automates data harvesting activities for hundreds of collection and observational data providers. The team of the Botanic Garden and Botanical Museum Berlin-Dahlem has extended this well-established system with a range of additional functions, including improved processing of multiple taxon identifications, the ability to represent associations between specimen and observation units, new data quality control and new reporting capabilities. The open source software B-HIT can be freely installed and used for setting up thematic networks serving the demands of particular user groups.

Caribbean marine biodiversity as a source of new compounds of biomedical interest and others industrial applications

OpenAIRE

Nuñez, R.; Garateix, A.; Laguna, A.; Fernández, M.D.; Ortiz, E.; Llanio, M.; Valdés, O.; Rodríguez, A.; Menéndez, R.

2006-01-01

The Cuban marine flora and fauna is characterized by its richness in species that represents an extraordinary natural source of unexplored biomolecular diversity. Many of those biomolecules could represent important tools for industrial applications. For this reason, in our Centre the main aim was focused on the isolation, purification and characterization of bioactive compounds present in marine invertebrates with particular emphasis on sponges, cnidarians, seaweeds and marine...

Permeable Boundries: Outsiders and Acces to Fishing Grounds in the Berau Marine Protected Ares

NARCIS (Netherlands)

Gunawan, B.; Visser, L.E.

2012-01-01

The designation of Marine Protected Areas (MPAs) in Indonesia has been accelerated over the past two decades in line with international biodiversity conservation commitments and to secure a basis for decentralised fisheries resources management. The Berau MPA of northeast Kalimantan is one of them.

Forecasting biodiversity in breeding birds using best practices

Science.gov (United States)

Taylor, Shawn D.; White, Ethan P.

2018-01-01

Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts are not evaluated to determine how well they predict future diversity, fail to account for uncertainty, and do not use time-series data that captures the actual dynamics being studied. We addressed these limitations by using best practices to explore our ability to forecast the species richness of breeding birds in North America. We used hindcasting to evaluate six different modeling approaches for predicting richness. Hindcasts for each method were evaluated annually for a decade at 1,237 sites distributed throughout the continental United States. All models explained more than 50% of the variance in richness, but none of them consistently outperformed a baseline model that predicted constant richness at each site. The best practices implemented in this study directly influenced the forecasts and evaluations. Stacked species distribution models and “naive” forecasts produced poor estimates of uncertainty and accounting for this resulted in these models dropping in the relative performance compared to other models. Accounting for observer effects improved model performance overall, but also changed the rank ordering of models because it did not improve the accuracy of the “naive” model. Considering the forecast horizon revealed that the prediction accuracy decreased across all models as the time horizon of the forecast increased. To facilitate the rapid improvement of biodiversity forecasts, we emphasize the value of specific best practices in making forecasts and evaluating forecasting methods. PMID:29441230

Forecasting biodiversity in breeding birds using best practices

Directory of Open Access Journals (Sweden)

David J. Harris

2018-02-01

Full Text Available Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts are not evaluated to determine how well they predict future diversity, fail to account for uncertainty, and do not use time-series data that captures the actual dynamics being studied. We addressed these limitations by using best practices to explore our ability to forecast the species richness of breeding birds in North America. We used hindcasting to evaluate six different modeling approaches for predicting richness. Hindcasts for each method were evaluated annually for a decade at 1,237 sites distributed throughout the continental United States. All models explained more than 50% of the variance in richness, but none of them consistently outperformed a baseline model that predicted constant richness at each site. The best practices implemented in this study directly influenced the forecasts and evaluations. Stacked species distribution models and “naive” forecasts produced poor estimates of uncertainty and accounting for this resulted in these models dropping in the relative performance compared to other models. Accounting for observer effects improved model performance overall, but also changed the rank ordering of models because it did not improve the accuracy of the “naive” model. Considering the forecast horizon revealed that the prediction accuracy decreased across all models as the time horizon of the forecast increased. To facilitate the rapid improvement of biodiversity forecasts, we emphasize the value of specific best practices in making forecasts and evaluating forecasting methods.

Birds as biodiversity surrogates

DEFF Research Database (Denmark)

Larsen, Frank Wugt; Bladt, Jesper Stentoft; Balmford, Andrew

2012-01-01

1. Most biodiversity is still unknown, and therefore, priority areas for conservation typically are identified based on the presence of surrogates, or indicator groups. Birds are commonly used as surrogates of biodiversity owing to the wide availability of relevant data and their broad popular...... and applications.?Good surrogates of biodiversity are necessary to help identify conservation areas that will be effective in preventing species extinctions. Birds perform fairly well as surrogates in cases where birds are relatively speciose, but overall effectiveness will be improved by adding additional data...... from other taxa, in particular from range-restricted species. Conservation solutions with focus on birds as biodiversity surrogate could therefore benefit from also incorporating species data from other taxa....

Interactive effects of anthropogenic nitrogen enrichment and climate change on terrestrial and aquatic biodiversity

Science.gov (United States)

Climate change and Nr from anthropogenic activities are causing some of the most rapid changes in biodiversity in recent times. Climate change is causing warming trends that result in poleward and elevational range shiftsof flora and fauna, and changes in phenology, particularly ...

BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources

Science.gov (United States)

2009-01-01

Background DNA barcoding provides a rapid, accurate, and standardized method for species-level identification using short DNA sequences. Such a standardized identification method is useful for mapping all the species on Earth, particularly when DNA sequencing technology is cheaply available. There are many nations in Asia with many biodiversity resources that need to be mapped and registered in databases. Results We have built a general DNA barcode data processing system, BioBarcode, with open source software - which is a general purpose database and server. It uses mySQL RDBMS 5.0, BLAST2, and Apache httpd server. An exemplary database of BioBarcode has around 11,300 specimen entries (including GenBank data) and registers the biological species to map their genetic relationships. The BioBarcode database contains a chromatogram viewer which improves the performance in DNA sequence analyses. Conclusion Asia has a very high degree of biodiversity and the BioBarcode database server system aims to provide an efficient bioinformatics protocol that can be freely used by Asian researchers and research organizations interested in DNA barcoding. The BioBarcode promotes the rapid acquisition of biological species DNA sequence data that meet global standards by providing specialized services, and provides useful tools that will make barcoding cheaper and faster in the biodiversity community such as standardization, depository, management, and analysis of DNA barcode data. The system can be downloaded upon request, and an exemplary server has been constructed with which to build an Asian biodiversity system http://www.asianbarcode.org. PMID:19958506

Recovering biodiversity knowledge

NARCIS (Netherlands)

Meijerink, G.W.; Smolders, H.; Sours, S.; Pou, S.

2005-01-01

Cambodian¿s civil wars have seriously affected the country¿s agro-biodiversity and the farmers¿ traditional knowledge in this field. The PEDIGREA project aims at conserving on-farm agro-biodiversity conservation and in Cambodia it focuses on vegetable diversity. It tries to link the preservation of

Rapid assessment of visual impairment (RAVI in marine fishing communities in South India - study protocol and main findings

Directory of Open Access Journals (Sweden)

Madala Sreenivas R

2011-09-01

Full Text Available Abstract Background Reliable data are a pre-requisite for planning eye care services. Though conventional cross sectional studies provide reliable information, they are resource intensive. A novel rapid assessment method was used to investigate the prevalence and causes of visual impairment and presbyopia in subjects aged 40 years and older. This paper describes the detailed methodology and study procedures of Rapid Assessment of Visual Impairment (RAVI project. Methods A population-based cross-sectional study was conducted using cluster random sampling in the coastal region of Prakasam district of Andhra Pradesh in India, predominantly inhabited by fishing communities. Unaided, aided and pinhole visual acuity (VA was assessed using a Snellen chart at a distance of 6 meters. The VA was re-assessed using a pinhole, if VA was Results The data collection was completed in Conclusion There is a high prevalence of visual impairment in marine fishing communities in Prakasam district in India. The data from this rapid assessment survey can now be used as a baseline to start eye care services in this region. The rapid assessment methodology (RAVI reported in this paper is robust, quick and has the potential to be replicated in other areas.

Achieving Aichi Biodiversity Target 11 to improve the performance of protected areas and conserve freshwater biodiversity

Science.gov (United States)

Diego Juffe-Bignoli; Ian Harrison; Stuart HM Butchart; Rebecca Flitcroft; Virgilio Hermoso; Harry Jonas; Anna Lukasiewicz; Michele Thieme; Eren Turak; Heather Bingham; James Dalton; William Darwall; Marine Deguignet; Nigel Dudley; Royal Gardner; Jonathan Higgins; Ritesh Kumar; Simon Linke; G Randy Milton; Jamie Pittock; Kevin G Smith; Arnout van Soesbergen

2016-01-01

1. The Strategic Plan for Biodiversity (2011–2020), adopted at the 10th meeting of the Conference of the Parties to the Convention on Biological Diversity, sets 20 Aichi Biodiversity Targets to be met by 2020 to address biodiversity loss and ensure its sustainable and equitable use. Aichi Biodiversity Target 11 describes what an improved conservation network would look...

Sustaining Rare Marine Microorganisms: Macroorganisms As Repositories and Dispersal Agents of Microbial Diversity.

Science.gov (United States)

Troussellier, Marc; Escalas, Arthur; Bouvier, Thierry; Mouillot, David

2017-01-01

Recent analyses revealed that most of the biodiversity observed in marine microbial communities is represented by organisms with low abundance but, nonetheless essential for ecosystem dynamics and processes across both temporal and spatial scales. Surprisingly, few studies have considered the effect of macroorganism-microbe interactions on the ecology and distribution dynamics of rare microbial taxa. In this review, we synthesize several lines of evidence that these relationships cannot be neglected any longer. First, we provide empirical support that the microbiota of macroorganisms represents a significant part of marine bacterial biodiversity and that host-microbe interactions benefit to certain microbial populations which are part of the rare biosphere (i.e., opportunistic copiotrophic organisms). Second, we reveal the major role that macroorganisms may have on the dispersal and the geographic distribution of microbes. Third, we introduce an innovative and integrated view of the interactions between microbes and macroorganisms, namely sustaining the rares , which suggests that macroorganisms favor the maintenance of marine microbial diversity and are involved in the regulation of its richness and dynamics. Finally, we show how this hypothesis complements existing theories in microbial ecology and offers new perspectives about the importance of macroorganisms for the microbial biosphere, particularly the rare members.

Marine gamma spectrometric survey

International Nuclear Information System (INIS)

Kostoglodov, V.V.

1979-01-01

Presented are theoretical problems physical and geochemical prerequisites and possibilities of practical application of the method of continuous submarine gamma-spectrometric survey and radiometric survey destined for rapid study of the surface layer of marine sediments. Shown is high efficiency and advantages of this method in comparison with traditional and widely spread in marine geology methods of bottom sediments investigation

Modelling marine sediment biogeochemistry: Current knowledge gaps, challenges, and some methodological advice for advancement

DEFF Research Database (Denmark)

Lessin, Gennadi; Artioli, Yuri; Almroth-Rosell, Elin

2018-01-01

The benthic environment is a crucial component of marine systems in the provision of ecosystem services, sustaining biodiversity and in climate regulation, and therefore important to human society. With the contemporary increase in computational power, model resolution and technological improveme......The benthic environment is a crucial component of marine systems in the provision of ecosystem services, sustaining biodiversity and in climate regulation, and therefore important to human society. With the contemporary increase in computational power, model resolution and technological...... improvements in quality and quantity of benthic data, it is necessary to ensure that benthic systems are appropriately represented in coupled benthic-pelagic biogeochemical and ecological modelling studies. In this paper we focus on five topical challenges related to various aspects of modelling benthic...... environments: organic matter reactivity, dynamics of benthic-pelagic boundary layer, microphytobenthos, biological transport and small-scale heterogeneity, and impacts of episodic events. We discuss current gaps in their understanding and indicate plausible ways ahead. Further, we propose a three...

A hierarchical classification of benthic biodiversity and assessment of protected areas in the Southern Ocean.

Directory of Open Access Journals (Sweden)

Lucinda L Douglass

Full Text Available An international effort is underway to establish a representative system of marine protected areas (MPAs in the Southern Ocean to help provide for the long-term conservation of marine biodiversity in the region. Important to this undertaking is knowledge of the distribution of benthic assemblages. Here, our aim is to identify the areas where benthic marine assemblages are likely to differ from each other in the Southern Ocean including near-shore Antarctica. We achieve this by using a hierarchical spatial classification of ecoregions, bathomes and environmental types. Ecoregions are defined according to available data on biogeographic patterns and environmental drivers on dispersal. Bathomes are identified according to depth strata defined by species distributions. Environmental types are uniquely classified according to the geomorphic features found within the bathomes in each ecoregion. We identified 23 ecoregions and nine bathomes. From a set of 28 types of geomorphic features of the seabed, 562 unique environmental types were classified for the Southern Ocean. We applied the environmental types as surrogates of different assemblages of biodiversity to assess the representativeness of existing MPAs. We found that 12 ecoregions are not represented in MPAs and that no ecoregion has their full range of environmental types represented in MPAs. Current MPA planning processes, if implemented, will substantially increase the representation of environmental types particularly within 8 ecoregions. To meet internationally agreed conservation goals, additional MPAs will be needed. To assist with this process, we identified 107 spatially restricted environmental types, which should be considered for inclusion in future MPAs. Detailed supplementary data including a spatial dataset are provided.

Climate change, sea-level rise, and conservation: keeping island biodiversity afloat.

Science.gov (United States)

Courchamp, Franck; Hoffmann, Benjamin D; Russell, James C; Leclerc, Camille; Bellard, Céline

2014-03-01

Island conservation programs have been spectacularly successful over the past five decades, yet they generally do not account for impacts of climate change. Here, we argue that the full spectrum of climate change, especially sea-level rise and loss of suitable climatic conditions, should be rapidly integrated into island biodiversity research and management. Copyright © 2014 Elsevier Ltd. All rights reserved.

Marine heatwaves off eastern Tasmania: Trends, interannual variability, and predictability

Science.gov (United States)

Oliver, Eric C. J.; Lago, Véronique; Hobday, Alistair J.; Holbrook, Neil J.; Ling, Scott D.; Mundy, Craig N.

2018-02-01

Surface waters off eastern Tasmania are a global warming hotspot. Here, mean temperatures have been rising over several decades at nearly four times the global average rate, with concomitant changes in extreme temperatures - marine heatwaves. These changes have recently caused the marine biodiversity, fisheries and aquaculture industries off Tasmania's east coast to come under stress. In this study we quantify the long-term trends, variability and predictability of marine heatwaves off eastern Tasmania. We use a high-resolution ocean model for Tasmania's eastern continental shelf. The ocean state over the 1993-2015 period is hindcast, providing daily estimates of the three-dimensional temperature and circulation fields. Marine heatwaves are identified at the surface and subsurface from ocean temperature time series using a consistent definition. Trends in marine heatwave frequency are positive nearly everywhere and annual marine heatwave days and penetration depths indicate significant positive changes, particularly off southeastern Tasmania. A decomposition into modes of variability indicates that the East Australian Current is the dominant driver of marine heatwaves across the domain. Self-organising maps are used to identify 12 marine heatwave types, each with its own regionality, seasonality, and associated large-scale oceanic and atmospheric circulation patterns. The implications of this work for marine ecosystems and their management were revealed through review of past impacts and stakeholder discussions regarding use of these data.

Marine mammal sightings around oil and gas installations in the central North Sea

DEFF Research Database (Denmark)

Delefosse, Matthieu; Rahbek, Malene Louise; Roesen, Lars

2017-01-01

288 animals were reported between May 2013 and May 2016. A total of seven marine mammal species were identified, five cetaceans: harbour porpoise (Phocoena phocoena), minke whale (Balaenoptera acutorostrata), white-beaked dolphin (Lagenorhynchus albirostris), killer whale (Orcinus orca), pilot whales......Relatively little is known about the distribution and diversity of marine mammals around offshore anthropogenic structures. Wepresentresultsobtainedfromincidentalsightings ofmarinemammalsaroundoilandgasinstallationslocated200 kmoff the Danish coast. A total of 131 sightings corresponding to about...... (Globicephala spp.) and two species of pinnipeds: harbour (Phoca vitulina) and grey seals (Halichoerus grypus). The most sighted species were harbour porpoise (41%) and minke whale (31%). Relative counts and biodiversity of marine mammals observed around installations corresponded well with the expected...

Deforestation and fragmentation of natural forests in the upper Changhua watershed, Hainan, China: implications for biodiversity conservation.

Science.gov (United States)

Zhai, De-Li; Cannon, Charles H; Dai, Zhi-Cong; Zhang, Cui-Ping; Xu, Jian-Chu

2015-01-01

Hainan, the largest tropical island in China, belongs to the Indo-Burma biodiversity hotspot. The Changhua watershed is a center of endemism for plants and birds and the cradle of Hainan's main rivers. However, this area has experienced recent and ongoing deforestation and habitat fragmentation. To quantify habitat loss and fragmentation of natural forests, as well as the land-cover changes in the Changhua watershed, we analyzed Landsat images obtained in 1988, 1995, and 2005. Land-cover dynamics analysis showed that natural forests increased in area (97,909 to 104,023 ha) from 1988 to 1995 but decreased rapidly to 76,306 ha over the next decade. Rubber plantations increased steadily throughout the study period while pulp plantations rapidly expanded after 1995. Similar patterns of land cover change were observed in protected areas, indicating a lack of enforcement. Natural forests conversion to rubber and pulp plantations has a general negative effect on biodiversity, primarily through habitat fragmentation. The fragmentation analysis showed that natural forests area was reduced and patch number increased, while patch size and connectivity decreased. These land-cover changes threatened local biodiversity, especially island endemic species. Both natural forests losses and fragmentation should be stopped by strict enforcement to prevent further damage. Preserving the remaining natural forests and enforcing the status of protected areas should be a management priority to maximize the watershed's biodiversity conservation value.

Forecasting the future of biodiversity

DEFF Research Database (Denmark)

Fitzpatrick, M. C.; Sanders, Nate; Ferrier, Simon

2011-01-01

, but their application to forecasting climate change impacts on biodiversity has been limited. Here we compare forecasts of changes in patterns of ant biodiversity in North America derived from ensembles of single-species models to those from a multi-species modeling approach, Generalized Dissimilarity Modeling (GDM...... climate change impacts on biodiversity....

Groundwater quality characterization to protect biodiversity in SADC region (Southern African Development Community

Directory of Open Access Journals (Sweden)

Stefania Vitale

2016-06-01

Full Text Available The following paper describes the first phase of a study held in the context of the SECOSUD Phase II project, called “Conservation and equitable use of biological diversity in the SADC region (Southern African Development Community, which aims at promoting biodiversity conservation and sustainable economic development in the SADC [1]. The Southern African Development Community (SADC is an inter-governmental organization, with 15 member states: Angola, Botswana, Democratic Republic of Congo, Lesotho, Mauritius, Malawi, Mozambique, Namibia, Madagascar, Seychelles, South Africa, Swaziland, Tanzania, Zambia, and Zimbabwe. Its aim is to increase socio-economic cooperation and integration among the community. It is one of the richest area in terms of biodiversity. The main goal of the Project is to contribute to stop biodiversity loss by supporting the development of conservation strategies. Biodiversity or biological diversity is formally defined by the Convention on Biological Diversity (CBD as: “the variability among living organisms from all sources including, among others, terrestrial, marine and other aquatic ecosystems and the ecological complexes of which they are part; this includes diversity within species, between species and of ecosystems” (UN 1992 Article 2 [2]. Biodiversity is affected by the interaction of multiple drivers and pressures including demographic, economic, socio-political, scientific and technological ones, which are leading to further decline, degradation and loss. The principal pressures on biodiversity include habitat loss and degradation, overexploitation, alien invasive species, climate change and pollution. These pressures are continuing to increase. To use biodiversity and to keep it in a sustainable way, it is necessary to study it, assess its economic value, develop a global strategy and a global network to monitor its status in the biosphere. An important step in developing conservation of biodiversity

Timing anthropogenic stressors to mitigate their impact on marine ecosystem resilience

OpenAIRE

Wu, Paul Pao-Yen; Mengersen, Kerrie; McMahon, Kathryn; Kendrick, Gary A.; Chartrand, Kathryn; York, Paul H.; Rasheed, Michael A.; Caley, M. Julian

2017-01-01

Better mitigation of anthropogenic stressors on marine ecosystems is urgently needed to address increasing biodiversity losses worldwide. We explore opportunities for stressor mitigation using whole-of-systems modelling of ecological resilience, accounting for complex interactions between stressors, their timing and duration, background environmental conditions and biological processes. We then search for ecological windows, times when stressors minimally impact ecological resilience, defined...

Parasites in marine food webs

Science.gov (United States)

Lafferty, Kevin D.

2013-01-01

Most species interactions probably involve parasites. This review considers the extent to which marine ecologists should consider parasites to fully understand marine communities. Parasites are influential parts of food webs in estuaries, temperate reefs, and coral reefs, but their ecological importance is seldom recognized. Though difficult to observe, parasites can have substantial biomass, and they can be just as common as free-living consumers after controlling for body mass and trophic level. Parasites have direct impacts on the energetics of their hosts and some affect host behaviors, with ecosystem-level consequences. Although they cause disease, parasites are sensitive components of ecosystems. In particular, they suffer secondary extinctions due to biodiversity loss. Some parasites can also return to a system after habitat restoration. For these reasons, parasites can make good indicators of ecosystem integrity. Fishing can indirectly increase or decrease parasite populations and the effects of climate change on parasites are likely to be equally as complex.

Conservación de la biodiversidad en Chile: Nuevos desafíos y oportunidades en ecosistemas terrestres y marinos costeros Biodiversity conservation in Chile: New challenges and opportunities in terrestrial and marine coastal ecosystems

Directory of Open Access Journals (Sweden)

CARMEN JORQUERA-JARAMILLO

2012-09-01

National State System of Protected Areas (SNASPE contains about 19 % of continental Chile. Although it does not represent all the ecosystems with endangered species, it can be supplemented by implementing new public and private protected areas (PA and PPP, respectively. The development of Marine Protected Areas (AMP is emerging, and some strategies share conservation responsibility with local stakeholders. In Chile, a set of regulations, laws and international treaties promote different conservation opportunities in land and marine coastal ecosystems. Some of the derived challenges involve standardizing the classification of species in conservation categories according to an international Protocol and optimizing the methodologies for selecting priority conservation areas; both criteria are essential for decision-making in biodiversity conservation. Another challenge is integrating the intrinsic value of biodiversity and the ecosystem services provided for promoting a participatory culture. This would improve the effectiveness of different strategies for the protection and sustainable use of biodiversity, involving education and citizen participation from a bio-cultural perspective. Education promotes nature conservation, as people become aware of their environment. Since participation involves citizens as actors in decision-making, it promotes the effective implementation of strategies for the conservation of biodiversity.

Towards a treaty instrument on marine genetic resources

OpenAIRE

Wehrli Judith; Cottier Thomas

2014-01-01

Marine genetic resources other than fish and mammals are of increasing commercial interest and importance in genetic engineering but fail being properly addressed in the law of the sea and in international economic law. The paper analyses the implication of the United Nations Convention on the Law of the Sea the Convention on Biodiversity the WTO Agreement on Trade Related Aspects of Intellectual Property Rights and related instruments under the auspices of WIPO. The paper argues that the tri...

Biodiversity Patterns on an Inshore to Offshore Gradient Using Metabarcoding and Barcoding Molecular Tools

KAUST Repository

Villalobos Vazquez de la Parra, Rodrigo

2015-12-01

It has been estimated that coral reefs shelter 830 000 species. Well-studied biodiversity patterns provide tools for better representation of species in marine protected areas. A cross-shelf gradient in biodiversity exists for fishes, corals, and macroalgae. Here, an inshore to offshore gradient in biodiversity on the Saudi Arabian coast of the Red Sea was sampled using Autonomous Reef Monitoring Structures (ARMS) with barcoding and metabarcoding techniques. It was hypothesized that differences in community structure would be driven by an increase in habitat area. The difference was attributed to the greater accumulation of sediments close to shore that increases the area habitable for sediment dwelling organisms and favors macroalgal cover. Macroalgae are inhabited by a greater number of species than live coral. Only 10% of the sequences of the barcoded fraction and <1% of the metabarcoded fraction had a BLAST hit on the NCBI database with a previously identified species sequence. In addition, the rarefaction curves for all fractions did not plateau. The ARMS community composition changed from inshore to offshore and was significantly correlated with the percentage of algal and bryozoan plate cover. The differences in community composition were related to changes in habitat but not to sediments retrieved from the ARMS.

Children prioritize virtual exotic biodiversity over local biodiversity.

Directory of Open Access Journals (Sweden)

Jean-Marie Ballouard

Full Text Available Environmental education is essential to stem current dramatic biodiversity loss, and childhood is considered as the key period for developing awareness and positive attitudes toward nature. Children are strongly influenced by the media, notably the internet, about biodiversity and conservation issues. However, most media focus on a few iconic, appealing, and usually exotic species. In addition, virtual activities are replacing field experiences. This situation may curb children knowledge and concerns about local biodiversity. Focusing our analyses on local versus exotic species, we examined the level of knowledge and the level of diversity of the animals that French schoolchildren are willing to protect, and whether these perceptions are mainly guided by information available in the internet. For that, we collected and compared two complementary data sets: 1 a questionnaire was administered to schoolchildren to assess their knowledge and consideration to protect animals, 2 an internet content analysis (i.e. Google searching sessions using keywords was performed to assess which animals are the most often represented. Our results suggest that the knowledge of children and their consideration to protect animal are mainly limited to internet contents, represented by a few exotic and charismatic species. The identification rate of local animals by schoolchildren was meager, suggesting a worrying disconnection from their local environment. Schoolchildren were more prone to protect "virtual" (unseen, exotic rather than local animal species. Our results reinforce the message that environmental education must also focus on outdoor activities to develop conservation consciousness and concerns about local biodiversity.

Detectability counts when assessing populations for biodiversity targets.

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Silviu O Petrovan

Full Text Available Efficient, practical and accurate estimates of population parameters are a necessary basis for effective conservation action to meet biodiversity targets. The brown hare is representative of many European farmland species: historically widespread and abundant but having undergone rapid declines as a result of agricultural intensification. As a priority species in the UK Biodiversity Action Plan, it has national targets for population increase that are part of wider national environmental indicators. Previous research has indicated that brown hare declines have been greatest in pastural landscapes and that gains might be made by focussing conservation effort there. We therefore used hares in pastural landscapes to examine how basic changes in survey methodology can affect the precision of population density estimates and related these to national targets for biodiversity conservation in the UK. Line transects for hares carried out at night resulted in higher numbers of detections, had better-fitting detection functions and provided more robust density estimates with lower effort than those during the day, due primarily to the increased probability of detection of hares at night and the nature of hare responses to the observer. Hare spring densities varied widely within a single region, with a pooled mean of 20.6 hares km(-2, significantly higher than the reported national average of hares in pastures of 3.3 hares km(-2. The high number of encounters allowed us to resolve hare densities at site, season and year scales. We demonstrate how survey conduct can impact on data quantity and quality with implications for setting and monitoring biodiversity targets. Our case study of the brown hare provides evidence that for wildlife species with low detectability, large scale volunteer-based monitoring programmes, either species specific or generalist, might be more successfully and efficiently carried out by a small number of trained personnel able to

Biodiversity characterisation and hydrodynamic consequences of marine fouling communities on marine renewable energy infrastructure in the Orkney Islands Archipelago, Scotland, UK.

Science.gov (United States)

Want, Andrew; Crawford, Rebecca; Kakkonen, Jenni; Kiddie, Greg; Miller, Susan; Harris, Robert E; Porter, Joanne S

2017-08-01

As part of ongoing commitments to produce electricity from renewable energy sources in Scotland, Orkney waters have been targeted for potential large-scale deployment of wave and tidal energy converting devices. Orkney has a well-developed infrastructure supporting the marine energy industry; recently enhanced by the construction of additional piers. A major concern to marine industries is biofouling on submerged structures, including energy converters and measurement instrumentation. In this study, the marine energy infrastructure and instrumentation were surveyed to characterise the biofouling. Fouling communities varied between deployment habitats; key species were identified allowing recommendations for scheduling device maintenance and preventing spread of invasive organisms. A method to measure the impact of biofouling on hydrodynamic response is described and applied to data from a wave-monitoring buoy deployed at a test site in Orkney. The results are discussed in relation to the accuracy of the measurement resources for power generation. Further applications are suggested for future testing in other scenarios, including tidal energy.

New Insights into the Diversity of Marine Picoeukaryotes

Science.gov (United States)

Not, Fabrice; del Campo, Javier; Balagué, Vanessa; de Vargas, Colomban; Massana, Ramon

2009-01-01

Over the last decade, culture-independent surveys of marine picoeukaryotic diversity based on 18S ribosomal DNA clone libraries have unveiled numerous sequences of novel high-rank taxa. This newfound diversity has significantly altered our understanding of marine microbial food webs and the evolution of eukaryotes. However, the current picture of marine eukaryotic biodiversity may be significantly skewed by PCR amplification biases, occurrence of rDNA genes in multiple copies within a single cell, and the capacity of DNA to persist as extracellular material. In this study we performed an analysis of the metagenomic dataset from the Global Ocean Survey (GOS) expedition, seeking eukaryotic ribosomal signatures. This PCR-free approach revealed similar phylogenetic patterns to clone library surveys, suggesting that PCR steps do not impose major biases in the exploration of environmental DNA. The different cell size fractions within the GOS dataset, however, displayed a distinct picture. High protistan diversity in the Marine Stramenopiles) appeared as potentially prominent grazers and we observed a significant decrease in the contribution of alveolate and radiolarian sequences, which overwhelmingly dominated rDNA libraries. The rRNA approach appears to be less affected by taxon-specific rDNA copy number and likely better depicts the biogeochemical significance of marine protists. PMID:19787059

Biodiversity protection and sustainable management of coastal areas: The Marine Protected Area of Egadi Islands

International Nuclear Information System (INIS)

Donati, Stefano

2015-01-01

The Marine Protected Area of Egadi Islands, northwest coast of Sicily Island, is the largest area in the Mediterranean Sea, stretching over with its 53,992 hectares. Established in 1991, since 2001 it is managed by the Municipality of Favignana on behalf of the Italian Ministry for the Environment, Land and Sea. The Egadi’s archipelago is located in the Strait of Sicily, and includes the islands of Favignana, Levanzo, Marettimo and the islets of Formica and Maraone. The institutional mission of the Marine Protected Area is the protection and enhancement of the marine environment, environmental education, awareness and information of users, research and monitoring, integrated management of the coastal zone, and the promotion of sustainable development, with particular reference to the eco-compatibility of tourism [it

Species distribution models of two critically endangered deep-sea octocorals reveal fishing impacts on vulnerable marine ecosystems in central Mediterranean Sea.

Science.gov (United States)

Lauria, V; Garofalo, G; Fiorentino, F; Massi, D; Milisenda, G; Piraino, S; Russo, T; Gristina, M

2017-08-14

Deep-sea coral assemblages are key components of marine ecosystems that generate habitats for fish and invertebrate communities and act as marine biodiversity hot spots. Because of their life history traits, deep-sea corals are highly vulnerable to human impacts such as fishing. They are an indicator of vulnerable marine ecosystems (VMEs), therefore their conservation is essential to preserve marine biodiversity. In the Mediterranean Sea deep-sea coral habitats are associated with commercially important crustaceans, consequently their abundance has dramatically declined due to the effects of trawling. Marine spatial planning is required to ensure that the conservation of these habitats is achieved. Species distribution models were used to investigate the distribution of two critically endangered octocorals (Funiculina quadrangularis and Isidella elongata) in the central Mediterranean as a function of environmental and fisheries variables. Results show that both species exhibit species-specific habitat preferences and spatial patterns in response to environmental variables, but the impact of trawling on their distribution differed. In particular F. quadrangularis can overlap with fishing activities, whereas I. elongata occurs exclusively where fishing is low or absent. This study represents the first attempt to identify key areas for the protection of soft and compact mud VMEs in the central Mediterranean Sea.

Anthropogenic disturbance can determine the magnitude of opportunistic species responses on marine urban infrastructures.

Science.gov (United States)

Airoldi, Laura; Bulleri, Fabio

2011-01-01

Coastal landscapes are being transformed as a consequence of the increasing demand for infrastructures to sustain residential, commercial and tourist activities. Thus, intertidal and shallow marine habitats are largely being replaced by a variety of artificial substrata (e.g. breakwaters, seawalls, jetties). Understanding the ecological functioning of these artificial habitats is key to planning their design and management, in order to minimise their impacts and to improve their potential to contribute to marine biodiversity and ecosystem functioning. Nonetheless, little effort has been made to assess the role of human disturbances in shaping the structure of assemblages on marine artificial infrastructures. We tested the hypothesis that some negative impacts associated with the expansion of opportunistic and invasive species on urban infrastructures can be related to the severe human disturbances that are typical of these environments, such as those from maintenance and renovation works. Maintenance caused a marked decrease in the cover of dominant space occupiers, such as mussels and oysters, and a significant enhancement of opportunistic and invasive forms, such as biofilm and macroalgae. These effects were particularly pronounced on sheltered substrata compared to exposed substrata. Experimental application of the disturbance in winter reduced the magnitude of the impacts compared to application in spring or summer. We use these results to identify possible management strategies to inform the improvement of the ecological value of artificial marine infrastructures. We demonstrate that some of the impacts of globally expanding marine urban infrastructures, such as those related to the spread of opportunistic, and invasive species could be mitigated through ecologically-driven planning and management of long-term maintenance of these structures. Impact mitigation is a possible outcome of policies that consider the ecological features of built infrastructures and

Anthropogenic disturbance can determine the magnitude of opportunistic species responses on marine urban infrastructures.

Directory of Open Access Journals (Sweden)

Laura Airoldi

Full Text Available BACKGROUND: Coastal landscapes are being transformed as a consequence of the increasing demand for infrastructures to sustain residential, commercial and tourist activities. Thus, intertidal and shallow marine habitats are largely being replaced by a variety of artificial substrata (e.g. breakwaters, seawalls, jetties. Understanding the ecological functioning of these artificial habitats is key to planning their design and management, in order to minimise their impacts and to improve their potential to contribute to marine biodiversity and ecosystem functioning. Nonetheless, little effort has been made to assess the role of human disturbances in shaping the structure of assemblages on marine artificial infrastructures. We tested the hypothesis that some negative impacts associated with the expansion of opportunistic and invasive species on urban infrastructures can be related to the severe human disturbances that are typical of these environments, such as those from maintenance and renovation works. METHODOLOGY/PRINCIPAL FINDINGS: Maintenance caused a marked decrease in the cover of dominant space occupiers, such as mussels and oysters, and a significant enhancement of opportunistic and invasive forms, such as biofilm and macroalgae. These effects were particularly pronounced on sheltered substrata compared to exposed substrata. Experimental application of the disturbance in winter reduced the magnitude of the impacts compared to application in spring or summer. We use these results to identify possible management strategies to inform the improvement of the ecological value of artificial marine infrastructures. CONCLUSIONS/SIGNIFICANCE: We demonstrate that some of the impacts of globally expanding marine urban infrastructures, such as those related to the spread of opportunistic, and invasive species could be mitigated through ecologically-driven planning and management of long-term maintenance of these structures. Impact mitigation is a

Biodiversity, Community and Trophic Structure of the Suprabenthos of the Gulf of Cádiz-Guadalquivir Estuary Coupled System: Linking Pelagic-Benthic and Terrestrial-Marine Ecosystems.

Science.gov (United States)

Vilas, C.

2016-02-01

Suprabenthos biodiversity and species densities on both offshore and coastal systems are largely unknown. Main components like mysids, euphasiids or amphipods are omnivorous and constitute a major dietary component for many benthic and pelagic fishes, mammals, cephalopods and decapods. Despite their relevant ecological role linking pelagic-benthic food webs, suprabenthos have been chronically undersampled and their components underrepresented and underestimated in food web models. Many pelagic and demersal species of high commercial and ecological interest at the Gulf of Cádiz (GoC) feed at a bottom scattering layer identified from 0 to 200 m depth and up to 50 km from coast, related to the Guadalquivir Estuary (GE) influence coastal area, and present life history cycles based on a sequential use of habitats from GoC to GE nursery area, may be adapted to match the horizontal migrations of key suprabenthos prey species. In order to understand the ecological mechanisms through which the GE-GoC coupled ecosystem would influence the recruitment of these fishery resources, the suprabenthos was sampled by suprabenthic sldege (200 μm) from the shallow estuary to 75 m depth during June, August and November of 2013. We identified up to 300 species (H index 0.4-2-9 and Beta diversity 0.55), being copepods, molluscs, cumacea, cladocera, poliquets, decapods, mysids and amphipods the most important groups by biomass (mg/m3), finding densities up to 32.9 mg/m3 for copepods, 6 for mysids and up to 100 mg/m3 for decapods. Multivariate analysis determines depth as the most important variable explaining community structure, decreasing biodiversity with depth, while for sites at depths species show seasonal horizontal migrations between GoC and GE, connecting terrestrial and marine ecosystems.

Options for promoting high-biodiversity REDD+

Energy Technology Data Exchange (ETDEWEB)

Swan, Steve; Mcnally, Richard; Grieg-Gran, Maryanne; Roe, Dilys; Mohammed, Essam Yassin

2011-11-15

International climate and biodiversity conventions agree that to be effective in the long term, strategies to reduce emissions from deforestation, forest degradation, conservation and enhancement of forest carbon stocks, and sustainable forest management (REDD+), must not undermine biodiversity. But how do countries achieve 'high-biodiversity REDD+' in practice? At a global level, options include immediate policy strengthening in international negotiations; promotion of co-benefit standards; and financial incentives and preferences for buying countries. At a national level, developing countries can also promote high-biodiversity REDD+ through more coherent policies; integrated planning; regulatory and economic instruments; and improved monitoring of biodiversity impacts.

Hypoxia in the changing marine environment

Science.gov (United States)

Zhang, J.; Cowie, G.; Naqvi, S. W. A.

2013-03-01

The predicted future of the global marine environment, as a combined result of forcing due to climate change (e.g. warming and acidification) and other anthropogenic perturbation (e.g. eutrophication), presents a challenge to the sustainability of ecosystems from tropics to high latitudes. Among the various associated phenomena of ecosystem deterioration, hypoxia can cause serious problems in coastal areas as well as oxygen minimum zones in the open ocean (Diaz and Rosenberg 2008 Science 321 926-9, Stramma et al 2008 Science 320 655-8). The negative impacts of hypoxia include changes in populations of marine organisms, such as large-scale mortality and behavioral responses, as well as variations of species distributions, biodiversity, physiological stress, and other sub-lethal effects (e.g. growth and reproduction). Social and economic activities that are related to services provided by the marine ecosystems, such as tourism and fisheries, can be negatively affected by the aesthetic outcomes as well as perceived or real impacts on seafood quality (STAP 2011 (Washington, DC: Global Environment Facility) p 88). Moreover, low oxygen concentration in marine waters can have considerable feedbacks to other compartments of the Earth system, like the emission of greenhouse gases to the atmosphere, and can affect the global biogeochemical cycles of nutrients and trace elements. It is of critical importance to prediction and adaptation strategies that the key processes of hypoxia in marine environments be precisely determined and understood (cf Zhang et al 2010 Biogeosciences 7 1-24).

Caribbean landscapes and their biodiversity

Science.gov (United States)

A. E. Lugo; E. H. Helmer; E. Santiago Valentín

2012-01-01

Both the biodiversity and the landscapes of the Caribbean have been greatly modified as a consequence of human activity. In this essay we provide an overview of the natural landscapes and biodiversity of the Caribbean and discuss how human activity has affected both. Our Caribbean geographic focus is on the insular Caribbean and the biodiversity focus is on the flora,...

FTIR microspectroscopy for rapid screening and monitoring of polyunsaturated fatty acid production in commercially valuable marine yeasts and protists.

Science.gov (United States)

Vongsvivut, Jitraporn; Heraud, Philip; Gupta, Adarsha; Puri, Munish; McNaughton, Don; Barrow, Colin J

2013-10-21

The increase in polyunsaturated fatty acid (PUFA) consumption has prompted research into alternative resources other than fish oil. In this study, a new approach based on focal-plane-array Fourier transform infrared (FPA-FTIR) microspectroscopy and multivariate data analysis was developed for the characterisation of some marine microorganisms. Cell and lipid compositions in lipid-rich marine yeasts collected from the Australian coast were characterised in comparison to a commercially available PUFA-producing marine fungoid protist, thraustochytrid. Multivariate classification methods provided good discriminative accuracy evidenced from (i) separation of the yeasts from thraustochytrids and distinct spectral clusters among the yeasts that conformed well to their biological identities, and (ii) correct classification of yeasts from a totally independent set using cross-validation testing. The findings further indicated additional capability of the developed FPA-FTIR methodology, when combined with partial least squares regression (PLSR) analysis, for rapid monitoring of lipid production in one of the yeasts during the growth period, which was achieved at a high accuracy compared to the results obtained from the traditional lipid analysis based on gas chromatography. The developed FTIR-based approach when coupled to programmable withdrawal devices and a cytocentrifugation module would have strong potential as a novel online monitoring technology suited for bioprocessing applications and large-scale production.

Biodiversity monitoring in Europe: the EU FP7 EBONE project. European biodiversity observation NEtwork

CSIR Research Space (South Africa)

Lück-Vogel, Melanie

2008-09-01

Full Text Available submission Presentation Poster presentation A) Title Biodiversity Monitoring in Europe: The EU FP7 EBONE project European Biodiversity Observation NEtwork B) Short title EBONE - European Biodiversity Observation NEtwork C) Author(s) Vogel, M. (1... stream_source_info Vogel_2008.pdf.txt stream_content_type text/plain stream_size 3055 Content-Encoding UTF-8 stream_name Vogel_2008.pdf.txt Content-Type text/plain; charset=UTF-8 BIOTA AFRICA Congress 2008 Abstract...

Integrating movement ecology with biodiversity research - exploring new avenues to address spatiotemporal biodiversity dynamics.

Science.gov (United States)

Jeltsch, Florian; Bonte, Dries; Pe'er, Guy; Reineking, Björn; Leimgruber, Peter; Balkenhol, Niko; Schröder, Boris; Buchmann, Carsten M; Mueller, Thomas; Blaum, Niels; Zurell, Damaris; Böhning-Gaese, Katrin; Wiegand, Thorsten; Eccard, Jana A; Hofer, Heribert; Reeg, Jette; Eggers, Ute; Bauer, Silke

2013-01-01

Movement of organisms is one of the key mechanisms shaping biodiversity, e.g. the distribution of genes, individuals and species in space and time. Recent technological and conceptual advances have improved our ability to assess the causes and consequences of individual movement, and led to the emergence of the new field of 'movement ecology'. Here, we outline how movement ecology can contribute to the broad field of biodiversity research, i.e. the study of processes and patterns of life among and across different scales, from genes to ecosystems, and we propose a conceptual framework linking these hitherto largely separated fields of research. Our framework builds on the concept of movement ecology for individuals, and demonstrates its importance for linking individual organismal movement with biodiversity. First, organismal movements can provide 'mobile links' between habitats or ecosystems, thereby connecting resources, genes, and processes among otherwise separate locations. Understanding these mobile links and their impact on biodiversity will be facilitated by movement ecology, because mobile links can be created by different modes of movement (i.e., foraging, dispersal, migration) that relate to different spatiotemporal scales and have differential effects on biodiversity. Second, organismal movements can also mediate coexistence in communities, through 'equalizing' and 'stabilizing' mechanisms. This novel integrated framework provides a conceptual starting point for a better understanding of biodiversity dynamics in light of individual movement and space-use behavior across spatiotemporal scales. By illustrating this framework with examples, we argue that the integration of movement ecology and biodiversity research will also enhance our ability to conserve diversity at the genetic, species, and ecosystem levels.

Making the case for biodiversity in South Africa: Re-framing biodiversity communications

Directory of Open Access Journals (Sweden)

Kristal Maze

2016-12-01

Conclusion: Based on the findings, a communications strategy known as ‘Making the case for biodiversity’ was developed that re-framed the economic, emotional and practical value propositions for biodiversity. The communications strategy has already resulted in greater political and economic attention towards biodiversity in South Africa.

Breaking boundaries for biodiversity : expanding the policy agenda to halt biodiversity loss

NARCIS (Netherlands)

Veen, M.P.; Sanders, M.E.; Tekelenburg, A.; Gerritsen, A.L.; Lörzing, J.A.; Brink, Th.

2010-01-01

Our assessment from the perspective of the Netherlands, a country in the temperate zone, showed a slightly positive picture, in line with the overall results for this zone. The loss of biodiversity in the Netherlands has been slowed down, but the European target – halting the loss of biodiversity –

Pollution exposure on marine protected areas: A global assessment.

Science.gov (United States)

Partelow, Stefan; von Wehrden, Henrik; Horn, Olga

2015-11-15

Marine protected areas (MPAs) face many challenges in their aim to effectively conserve marine ecosystems. In this study we analyze the extent of pollution exposure on the global fleet of MPAs. This includes indicators for current and future pollution and the implications for regionally clustered groups of MPAs with similar biophysical characteristics. To cluster MPAs into characteristic signature groups, their bathymetry, baseline biodiversity, distance from shore, mean sea surface temperature and mean sea surface salinity were used. We assess the extent at which each signature group is facing exposure from multiple pollution types. MPA groups experience similar pollution exposure on a regional level. We highlight how the challenges that MPAs face can be addressed through governance at the appropriate scale and design considerations for integrated terrestrial and marine management approaches within regional level networks. Furthermore, we present diagnostic social-ecological indicators for addressing the challenges facing unsuccessful MPAs with practical applications. Copyright © 2015 Elsevier Ltd. All rights reserved.

Relationship between biodiversity and agricultural production

OpenAIRE

Brunetti, Ilaria; Tidball, Mabel; Couvet, Denis

2018-01-01

Agriculture is one of the main causes of biodiversity loss. In this work we model the interdependent relationship between biodiversity and agriculture on a farmed land, supposing that, while agriculture has a negative impact on biodiversity, the latter can increase agricultural production. Farmers act as myopic agents, who maximize their instantaneous profit without considering the negative effects of their practice on the evolution of biodiversity. We find that a tax on inputs can have a pos...

Challenges of Biodiversity Education: A Review of Education Strategies for Biodiversity Education

Science.gov (United States)

Navarro-Perez, Moramay; Tidball, Keith G.

2012-01-01

Biodiversity conservation has increasingly gained recognition in national and international agendas. The Convention on Biological Diversity (CBD) has positioned biodiversity as a key asset to be protected to ensure our well-being and that of future generations. Nearly 20 years after its inception, results are not as expected, as shown in the…

New Mediterranean Biodiversity Records (April 2015

Directory of Open Access Journals (Sweden)

Α. ΖΕΝΕΤΟΣ

2015-01-01

Full Text Available The Collective Article ‘New Mediterranean Biodiversity Records’ of the Mediterranean Marine Science journal offers the means to publish biodiversity records in the Mediterranean Sea. The current article is divided in two parts, for records of native and alien species respectively. The new records of native fish species include: the slender sunfish Ranzania laevis and the scalloped ribbonfish Zu cristatus in Calabria; the Azores rockling Gaidropsarus granti in Calabria and Sicily; the agujon needlefish Tylosurus acus imperialis in the Northern Aegean; and the amphibious behaviour of Gouania willdenowi in Southern Turkey. As regards molluscs, the interesting findings include Ischnochiton usticensis in Calabria and Thordisa filix in the bay of Piran (Slovenia. The stomatopod Parasquilla ferussaci was collected from Lesvos island (Greece; the isopod Anilocra frontalis was observed parasitizing the alien Pteragogus trispilus in the Rhodes area. The asteroid Tethyaster subinermis and the butterfly ray Gymnura altavela were reported from several localities in the Greek Ionian and Aegean Seas. The new records of alien species include: the antenna codlet Bregmaceros atlanticus in Saronikos Gulf; three  new fish records and two decapods from Egypt; the establishment of the two spot cardinal fish Cheilodipterus novemstriatus and the first record of the Indo-Pacific marble shrimp Saron marmoratus in semi-dark caves along the Lebanese coastline; the finding of Lagocephalus sceleratus, Sargocentron rubrum, Fistularia commersonii and Stephanolepis diaspros around Lipsi island (Aegean Sea, Greece; the decapod Penaeus hathor in Aegean waters; the decapod Penaeus aztecus and the nudibranch Melibe viridis in the Dodecanese islands; the finding of Pinctada imbricata radiata in the Mar Grande of Taranto (Ionian Sea, Italy and the Maliakos Gulf (Greece.

A biodiversity indicators dashboard: addressing challenges to monitoring progress towards the Aichi biodiversity targets using disaggregated global data.

Science.gov (United States)

Han, Xuemei; Smyth, Regan L; Young, Bruce E; Brooks, Thomas M; Sánchez de Lozada, Alexandra; Bubb, Philip; Butchart, Stuart H M; Larsen, Frank W; Hamilton, Healy; Hansen, Matthew C; Turner, Will R

2014-01-01

Recognizing the imperiled status of biodiversity and its benefit to human well-being, the world's governments committed in 2010 to take effective and urgent action to halt biodiversity loss through the Convention on Biological Diversity's "Aichi Targets". These targets, and many conservation programs, require monitoring to assess progress toward specific goals. However, comprehensive and easily understood information on biodiversity trends at appropriate spatial scales is often not available to the policy makers, managers, and scientists who require it. We surveyed conservation stakeholders in three geographically diverse regions of critical biodiversity concern (the Tropical Andes, the African Great Lakes, and the Greater Mekong) and found high demand for biodiversity indicator information but uneven availability. To begin to address this need, we present a biodiversity "dashboard"--a visualization of biodiversity indicators designed to enable tracking of biodiversity and conservation performance data in a clear, user-friendly format. This builds on previous, more conceptual, indicator work to create an operationalized online interface communicating multiple indicators at multiple spatial scales. We structured this dashboard around the Pressure-State-Response-Benefit framework, selecting four indicators to measure pressure on biodiversity (deforestation rate), state of species (Red List Index), conservation response (protection of key biodiversity areas), and benefits to human populations (freshwater provision). Disaggregating global data, we present dashboard maps and graphics for the three regions surveyed and their component countries. These visualizations provide charts showing regional and national trends and lay the foundation for a web-enabled, interactive biodiversity indicators dashboard. This new tool can help track progress toward the Aichi Targets, support national monitoring and reporting, and inform outcome-based policy-making for the protection of

A biodiversity indicators dashboard: addressing challenges to monitoring progress towards the Aichi biodiversity targets using disaggregated global data.

Directory of Open Access Journals (Sweden)

Xuemei Han

Full Text Available Recognizing the imperiled status of biodiversity and its benefit to human well-being, the world's governments committed in 2010 to take effective and urgent action to halt biodiversity loss through the Convention on Biological Diversity's "Aichi Targets". These targets, and many conservation programs, require monitoring to assess progress toward specific goals. However, comprehensive and easily understood information on biodiversity trends at appropriate spatial scales is often not available to the policy makers, managers, and scientists who require it. We surveyed conservation stakeholders in three geographically diverse regions of critical biodiversity concern (the Tropical Andes, the African Great Lakes, and the Greater Mekong and found high demand for biodiversity indicator information but uneven availability. To begin to address this need, we present a biodiversity "dashboard"--a visualization of biodiversity indicators designed to enable tracking of biodiversity and conservation performance data in a clear, user-friendly format. This builds on previous, more conceptual, indicator work to create an operationalized online interface communicating multiple indicators at multiple spatial scales. We structured this dashboard around the Pressure-State-Response-Benefit framework, selecting four indicators to measure pressure on biodiversity (deforestation rate, state of species (Red List Index, conservation response (protection of key biodiversity areas, and benefits to human populations (freshwater provision. Disaggregating global data, we present dashboard maps and graphics for the three regions surveyed and their component countries. These visualizations provide charts showing regional and national trends and lay the foundation for a web-enabled, interactive biodiversity indicators dashboard. This new tool can help track progress toward the Aichi Targets, support national monitoring and reporting, and inform outcome-based policy-making for the

A Biodiversity Indicators Dashboard: Addressing Challenges to Monitoring Progress towards the Aichi Biodiversity Targets Using Disaggregated Global Data

Science.gov (United States)

Han, Xuemei; Smyth, Regan L.; Young, Bruce E.; Brooks, Thomas M.; Sánchez de Lozada, Alexandra; Bubb, Philip; Butchart, Stuart H. M.; Larsen, Frank W.; Hamilton, Healy; Hansen, Matthew C.; Turner, Will R.

2014-01-01

Recognizing the imperiled status of biodiversity and its benefit to human well-being, the world's governments committed in 2010 to take effective and urgent action to halt biodiversity loss through the Convention on Biological Diversity's “Aichi Targets”. These targets, and many conservation programs, require monitoring to assess progress toward specific goals. However, comprehensive and easily understood information on biodiversity trends at appropriate spatial scales is often not available to the policy makers, managers, and scientists who require it. We surveyed conservation stakeholders in three geographically diverse regions of critical biodiversity concern (the Tropical Andes, the African Great Lakes, and the Greater Mekong) and found high demand for biodiversity indicator information but uneven availability. To begin to address this need, we present a biodiversity “dashboard” – a visualization of biodiversity indicators designed to enable tracking of biodiversity and conservation performance data in a clear, user-friendly format. This builds on previous, more conceptual, indicator work to create an operationalized online interface communicating multiple indicators at multiple spatial scales. We structured this dashboard around the Pressure-State-Response-Benefit framework, selecting four indicators to measure pressure on biodiversity (deforestation rate), state of species (Red List Index), conservation response (protection of key biodiversity areas), and benefits to human populations (freshwater provision). Disaggregating global data, we present dashboard maps and graphics for the three regions surveyed and their component countries. These visualizations provide charts showing regional and national trends and lay the foundation for a web-enabled, interactive biodiversity indicators dashboard. This new tool can help track progress toward the Aichi Targets, support national monitoring and reporting, and inform outcome-based policy-making for the

Economic growth, biodiversity loss and conservation effort.

Science.gov (United States)

Dietz, Simon; Adger, W Neil

2003-05-01

This paper investigates the relationship between economic growth, biodiversity loss and efforts to conserve biodiversity using a combination of panel and cross section data. If economic growth is a cause of biodiversity loss through habitat transformation and other means, then we would expect an inverse relationship. But if higher levels of income are associated with increasing real demand for biodiversity conservation, then investment to protect remaining diversity should grow and the rate of biodiversity loss should slow with growth. Initially, economic growth and biodiversity loss are examined within the framework of the environmental Kuznets hypothesis. Biodiversity is represented by predicted species richness, generated for tropical terrestrial biodiversity using a species-area relationship. The environmental Kuznets hypothesis is investigated with reference to comparison of fixed and random effects models to allow the relationship to vary for each country. It is concluded that an environmental Kuznets curve between income and rates of loss of habitat and species does not exist in this case. The role of conservation effort in addressing environmental problems is examined through state protection of land and the regulation of trade in endangered species, two important means of biodiversity conservation. This analysis shows that the extent of government environmental policy increases with economic development. We argue that, although the data are problematic, the implications of these models is that conservation effort can only ever result in a partial deceleration of biodiversity decline partly because protected areas serve multiple functions and are not necessarily designated to protect biodiversity. Nevertheless institutional and policy response components of the income biodiversity relationship are important but are not well captured through cross-country regression analysis.

The sceptical optimist: challenges and perspectives for the application of environmental DNA in marine fisheries

DEFF Research Database (Denmark)

Hansen, Brian Klitgaard; Bekkevold, Dorte; Worsøe Clausen, Lotte

2018-01-01

principles in relation to eDNA analysis with potential for marine fisheries application. We describe fundamental processes governing eDNA generation, breakdown and transport and summarize current uncertainties about these processes. We describe five major challenges in relation to application in fisheries......Application of environmental DNA (eDNA) analysis has attracted the attention of researchers, advisors and managers of living marine resources and biodiversity. The apparent simplicity and cost-effectiveness of eDNA analysis make it highly attractive as species distributions can be revealed from...... assessment, where there is immediate need for knowledge building in marine systems, and point to apparent weaknesses of eDNA compared to established marine fisheries monitoring methods. We provide an overview of emerging applications of interest to fisheries management and point to recent technological...

European Biodiversity Observation Network – EBONE

NARCIS (Netherlands)

Halada, L.; Jongman, R.H.G.; Gerard, F.; Whittaker, L.; Bunce, R.G.H.; Bauch, B.; Schmeller, D.S.

2009-01-01

EBONE (European Biodiversity Observation Network) is a project developing a system of biodiversity observation at regional, national and European levels as a contribution to European reporting on biodiversity. The project focuses on GEO (Group of Earth Observations) task BI 07-01 to unify many of

In Defence of Biodiversity

NARCIS (Netherlands)

Archer, Alfred; Burch Brown, Joanna

2017-01-01

The concept of biodiversity has played a central role within conservation biology over the last thirty years. Precisely how it should be understood, however, is a matter of ongoing debate. In this paper we defend what we call a classic multidimensional conception of biodiversity. We begin by

Biodiversity as a multidimensional construct: a review, framework and case study of herbivory's impact on plant biodiversity

DEFF Research Database (Denmark)

Naeem, S.; Prager, Case; Weeks, Brian

2016-01-01

Biodiversity is inherently multidimensional, encompassing taxonomic, functional, phylogenetic, genetic, landscape and many other elements of variability of life on the Earth. However, this fundamental principle of multidimensionality is rarely applied in research aimed at understanding biodiversity...... on understory plant cover at Black Rock Forest, New York. Using three biodiversity dimensions (taxonomic, functional and phylogenetic diversity) to explore our framework, we found that herbivory alters biodiversity's multidimensional influence on plant cover; an effect not observable through a unidimensional...

Managing mangroves with benthic biodiversity in mind: Moving beyond roving banditry

Science.gov (United States)

Ellison, Aaron M.

2008-02-01

This review addresses mangrove management activities in the broader context of the diversity of the mangrove benthos. Goals for mangrove ecosystem management include silviculture, aquaculture, or 'ecosystem services' such as coastal protection. Silvicultural management of mangroves generally neglects the benthos, although benthic invertebrates may affect tree establishment and growth, and community composition of benthic invertebrates may be a reliable indicator of the state of managed mangrove forests. Similarly, mangrove aquaculture focuses on particular species with little attention paid either to impacts on other trophic levels or to feedbacks with the trees. Exploitation of mangrove-associated prawns, crabs, and molluscs has a total economic value > US $4 billion per year. These aquaculture operations still rely on wild-collected stock; world-wide patterns of exploitation fit the well-known process of 'roving banditry', where mobile agents move from location to location, rapidly exploiting and depleting local resources before moving on to other, as-yet unprotected grounds. Collection of brood stock and fishing for other external inputs required by aquaculture (e.g., 'trash fish') removes intermediate trophic levels from marine food webs, may destabilize them, and lead to secondary extinctions of higher-order predators. Increased attention being paid to the role of mangroves in coastal protection following the 2004 Indian Ocean tsunami provides an opportunity to reassess the relative merits of management focused on short-term economic gains. Managing for ecosystem services may ultimately preserve benthic biodiversity in mangrove ecosystems.

Inter-American Biodiversity Information Network (IABIN)

Science.gov (United States)

site. IABIN Inter-American Biodiversity Information Network (IABIN) OAS » SEDI » DSD » IABIN IABIN GEF Logo inbio natserve usgs polpar wcm The Inter-American Biodiversity Information Network (IABIN , and use of biodiversity information relevant to policy and decision-making on natural resources

The Middle Triassic marine reptile biodiversity in the Germanic Basin, in the centre of the Pangaean world

Science.gov (United States)

Diedrich, Cajus G.

2012-03-01

The Middle Triassic fossil reptile localities near Bayreuth (Bavaria, southern Germany) consist of shallow marine autochthonous glauconitic marls and terebratulid-rich tempestite carbonates of the newly defined Bindlach and Hegnabrunn formations. Single bones and incomplete skeletons of marine reptiles have been recorded in bone beds within in the Illyrian and Fassanian stages. These include the remains of the sauropterygians Neusticosaurus sp., Lariosaurus cf. buzzii [1], Nothosaurus mirabilis [2], Paranothosaurus giganteus [2], Placodus gigas [3], Cyamodus rostratus [4], Cyamodus münsteri [5], Pistosaurus longaevus [6], and ichthyosaurs Omphalosaurus sp., and Shastasaurus sp. or proterosaur Tanystrophaeus conspicuus [7]. New skeletal reconstructions are based on the osteological analysis of three dimensionally preserved bones and skeletal remains. The large number of marine endemic placodont macroalgae feeders ( P. gigas) in the Bayreuth sites coincides with the presence of invertebrate palaeocommunities that are characteristic of macroalgae meadow paleoenvironments. Most of the reptile species and genera from the Bayreuth localities also occur in beds of similar ages from the Monte San Giorgio (Switzerland/Italy) or Perledo (Italy) lagoonal areas. Ichthyosaurs and pistosaurs were adapted for open marine conditions, and may have migrated from the Panthalassa Oceans into the shallow marine Germanic Basin to reproduce, whereas placodonts and many other sauropterygians seem to have lived permanently in those shallow marine habitats, with large squamates and thecodont or smaller archosaurs in coastal areas.

Biodiversity as a multidimensional construct: a review, framework and case study of herbivory's impact on plant biodiversity

Science.gov (United States)

Naeem, S.; Prager, Case; Weeks, Brian; Varga, Alex; Flynn, Dan F. B.; Griffin, Kevin; Muscarella, Robert; Palmer, Matthew; Wood, Stephen; Schuster, William

2016-01-01

Biodiversity is inherently multidimensional, encompassing taxonomic, functional, phylogenetic, genetic, landscape and many other elements of variability of life on the Earth. However, this fundamental principle of multidimensionality is rarely applied in research aimed at understanding biodiversity's value to ecosystem functions and the services they provide. This oversight means that our current understanding of the ecological and environmental consequences of biodiversity loss is limited primarily to what unidimensional studies have revealed. To address this issue, we review the literature, develop a conceptual framework for multidimensional biodiversity research based on this review and provide a case study to explore the framework. Our case study specifically examines how herbivory by whitetail deer (Odocoileus virginianus) alters the multidimensional influence of biodiversity on understory plant cover at Black Rock Forest, New York. Using three biodiversity dimensions (taxonomic, functional and phylogenetic diversity) to explore our framework, we found that herbivory alters biodiversity's multidimensional influence on plant cover; an effect not observable through a unidimensional approach. Although our review, framework and case study illustrate the advantages of multidimensional over unidimensional approaches, they also illustrate the statistical and empirical challenges such work entails. Meeting these challenges, however, where data and resources permit, will be important if we are to better understand and manage the consequences we face as biodiversity continues to decline in the foreseeable future. PMID:27928041

Biodiversity as a multidimensional construct: a review, framework and case study of herbivory's impact on plant biodiversity.

Science.gov (United States)

Naeem, S; Prager, Case; Weeks, Brian; Varga, Alex; Flynn, Dan F B; Griffin, Kevin; Muscarella, Robert; Palmer, Matthew; Wood, Stephen; Schuster, William

2016-12-14

Biodiversity is inherently multidimensional, encompassing taxonomic, functional, phylogenetic, genetic, landscape and many other elements of variability of life on the Earth. However, this fundamental principle of multidimensionality is rarely applied in research aimed at understanding biodiversity's value to ecosystem functions and the services they provide. This oversight means that our current understanding of the ecological and environmental consequences of biodiversity loss is limited primarily to what unidimensional studies have revealed. To address this issue, we review the literature, develop a conceptual framework for multidimensional biodiversity research based on this review and provide a case study to explore the framework. Our case study specifically examines how herbivory by whitetail deer (Odocoileus virginianus) alters the multidimensional influence of biodiversity on understory plant cover at Black Rock Forest, New York. Using three biodiversity dimensions (taxonomic, functional and phylogenetic diversity) to explore our framework, we found that herbivory alters biodiversity's multidimensional influence on plant cover; an effect not observable through a unidimensional approach. Although our review, framework and case study illustrate the advantages of multidimensional over unidimensional approaches, they also illustrate the statistical and empirical challenges such work entails. Meeting these challenges, however, where data and resources permit, will be important if we are to better understand and manage the consequences we face as biodiversity continues to decline in the foreseeable future. © 2016 The Authors.

Reefs as cradles of evolution and sources of biodiversity in the Phanerozoic.

Science.gov (United States)

Kiessling, Wolfgang; Simpson, Carl; Foote, Michael

2010-01-08

Large-scale biodiversity gradients among environments and habitats are usually attributed to a complex array of ecological and evolutionary factors. We tested the evolutionary component of such gradients by compiling the environments of the geologically oldest occurrences of marine genera and using sampling standardization to assess if originations tended to be clustered in particular environments. Shallow, tropical environments and carbonate substrates all tend to have harbored high origination rates. Diversity within these environments tended to be preferentially generated in reefs, probably because of their habitat complexity. Reefs were also prolific at exporting diversity to other environments, which might be a consequence of low-diversity habitats being more susceptible to invasions.

Ecological stability and biodiversity of disturbed land

International Nuclear Information System (INIS)

Tewary, B.K.; Singh, R.S.; Dhar, B.B.

1996-01-01

Ecosystems destruction by mining is an inevitable part of industrialisation. Disposal of debris and low grade ore and minerals reduces the vegetation cover and population of wild animals. Further it causes an unprecedented increase in the rate of accumulation of waste dumps, depleted topsoil, increase in sedimentation load and ultimately prevention of natural succession of native vegetation of the area. Revegetation of overburden dumps through systematic means increase slope stability, enhances the infiltration rate of rain water, increase in soil fertility and natural succession of the native plant species which maintain the long term stability of the ecosystems. Rapid growing population followed with extensive land clearing by the mineral and other industries have caused rapid increase in the extinction of biological diversity. In this paper an attempt is made to portray the natural succession process to preserve the biodiversity of the area. A case study for a coal mining area in India is given. 9 refs., 4 tabs

Sustainable pest regulation in agricultural landscapes: a review on landscape composition, biodiversity and natural pest control

NARCIS (Netherlands)

Bianchi, F.J.J.A.; Booij, C.J.H.; Tscharntke, T.

2006-01-01

Agricultural intensification has resulted in a simplification of agricultural landscapes by the expansion of agricultural land, enlargement of field size and removal of non-crop habitat. These changes are considered to be an important cause of the rapid decline in farmland biodiversity, with the

Letting the managers manage: analyzing capacity to conserve biodiversity in a cross-border protected area network

Directory of Open Access Journals (Sweden)

Sarah Clement

2016-09-01

Full Text Available Biodiversity loss is one of the most significant drivers of ecosystem change and is projected to continue at a rapid rate. While protected areas, such as national parks, are seen as important refuges for biodiversity, their effectiveness in stemming biodiversity decline has been questioned. Public agencies have a critical role in the governance of many such areas, but there are tensions between the need for these agencies to be more "adaptive" and their current operating environment. Our aim is to analyze how institutions enable or constrain capacity to conserve biodiversity in a globally significant cross-border network of protected areas, the Australian Alps. Using a novel conceptual framework for diagnosing biodiversity institutions, our research examined institutional adaptive capacity and more general capacity for conserving biodiversity. Several intertwined issues limit public agencies' capacity to fulfill their conservation responsibilities. Narrowly defined accountability measures constrain adaptive capacity and divert attention away from addressing key biodiversity outcomes. Implications for learning were also evident, with protected area agencies demonstrating successful learning for on-ground issues but less success in applying this learning to deeper policy change. Poor capacity to buffer political and community influences in managing significant cross-border drivers of biodiversity decline signals poor fit with the institutional context and has implications for functional fit. While cooperative federalism provides potential benefits for buffering through diversity, it also means protected area agencies have restricted authority to address cross-border threats. Restrictions on staff authority and discretion, as public servants, have further implications for deploying capacity. This analysis, particularly the possibility of fostering "ambidexterity" - creatively responding to political pressures in a way that also achieves a desirable

Biodiversity

CSIR Research Space (South Africa)

Scholes, RJ

2006-01-01

Full Text Available Biodiversity offers multiple opportunities for development and improving human well-being. It is the basis for essential environmental services upon which life on Earth depends. Thus, its conservation and sustainable use are of critical importance...

Measuring Biodiversity in Forest Communities – A Role of Biodiversity Indices

Directory of Open Access Journals (Sweden)

Lakićević Milena

2018-03-01

Full Text Available Biodiversity refers to genetic, species and ecosystems varieties within an area. Two main characteristics that should be investigated when considering biodiversity are richness and evenness. Richness is related to the number of different species in the analyzed area, while evenness corresponds to the homogeneity of the abundance of species. For quantifying these features, many indices have been defined, and this paper offers an overview of the most commonly used biodiversity indices, such as Shannon, Simpson, Margalef and Berger-Parker. The paper explains the process of calculating these indices on the case study example of four forest communities and discusses the results obtained. The Jaccard index analysis is used to discover a similarity between the analyzed forest communities. Results from this part of the research are visualized by creating appropriate dendrograms for making the interpretation easier. Calculating and analyzing these indices is useful not only for forest ecosystems, but for the other types of ecosystems as well, including agro-ecosystems. Biodiversity indices can be obtained in thespecialized software, for instance in EstimateS (Statistical Estimation of Species Richness and Shared Species from Samples, or by programming in the statistical package R, as it was done in this research.

Hypoxia in the changing marine environment

International Nuclear Information System (INIS)

Zhang, J; Cowie, G; Naqvi, S W A

2013-01-01

The predicted future of the global marine environment, as a combined result of forcing due to climate change (e.g. warming and acidification) and other anthropogenic perturbation (e.g. eutrophication), presents a challenge to the sustainability of ecosystems from tropics to high latitudes. Among the various associated phenomena of ecosystem deterioration, hypoxia can cause serious problems in coastal areas as well as oxygen minimum zones in the open ocean (Diaz and Rosenberg 2008 Science 321 926–9, Stramma et al 2008 Science 320 655–8). The negative impacts of hypoxia include changes in populations of marine organisms, such as large-scale mortality and behavioral responses, as well as variations of species distributions, biodiversity, physiological stress, and other sub-lethal effects (e.g. growth and reproduction). Social and economic activities that are related to services provided by the marine ecosystems, such as tourism and fisheries, can be negatively affected by the aesthetic outcomes as well as perceived or real impacts on seafood quality (STAP 2011 (Washington, DC: Global Environment Facility) p 88). Moreover, low oxygen concentration in marine waters can have considerable feedbacks to other compartments of the Earth system, like the emission of greenhouse gases to the atmosphere, and can affect the global biogeochemical cycles of nutrients and trace elements. It is of critical importance to prediction and adaptation strategies that the key processes of hypoxia in marine environments be precisely determined and understood (cf Zhang et al 2010 Biogeosciences 7 1–24). (synthesis and review)

Toward an integrated understanding of perceived biodiversity values and environmental conditions in a national park

Science.gov (United States)

van Riper, Carena J.; Kyle, Gerard T.; Sherrouse, Ben C.; Bagstad, Kenneth J.; Sutton, Stephen G.

2016-01-01

In spatial planning and management of protected areas, increased priority is being given to research that integrates social and ecological data. However, public viewpoints of the benefits provided by ecosystems are not easily quantified and often implicitly folded into natural resource management decisions. Drawing on a spatially explicit participatory mapping exercise and a Social Values for Ecosystem Services (SolVES) analysis tool, the present study empirically examined and integrated social values for ecosystem services and environmental conditions within Channel Islands National Park, California. Specifically, a social value indicator of perceived biodiversity was examined using on-site survey data collected from a sample of people who visited the park. This information was modeled alongside eight environmental conditions including faunal species richness for six taxa, vegetation density, categories of marine and terrestrial land cover, and distance to features relevant for decision-makers. Results showed that biodiversity value points assigned to places by the pooled sample of respondents were widely and unevenly mapped, which reflected the belief that biodiversity was embodied to varying degrees by multiple locations in the park. Models generated for two survey subgroups defined by their self-reported knowledge of the Channels Islands revealed distinct spatial patterns of these perceived values. Specifically, respondents with high knowledge valued large spaces that were publicly inaccessible and unlikely to contain on-ground biodiversity, whereas respondents with low knowledge valued places that were experienced first-hand. Accessibility and infrastructure were also important considerations for anticipating how and where people valued the protected land and seascapes of Channel Islands National Park.

Plastics in the Marine Environment.

Science.gov (United States)

Law, Kara Lavender

2017-01-03

Plastics contamination in the marine environment was first reported nearly 50 years ago, less than two decades after the rise of commercial plastics production, when less than 50 million metric tons were produced per year. In 2014, global plastics production surpassed 300 million metric tons per year. Plastic debris has been detected worldwide in all major marine habitats, in sizes from microns to meters. In response, concerns about risks to marine wildlife upon exposure to the varied forms of plastic debris have increased, stimulating new research into the extent and consequences of plastics contamination in the marine environment. Here, I present a framework to evaluate the current understanding of the sources, distribution, fate, and impacts of marine plastics. Despite remaining knowledge gaps in mass budgeting and challenges in investigating ecological impacts, the increasing evidence of the ubiquity of plastics contamination in the marine environment, the continued rapid growth in plastics production, and the evidence-albeit limited-of demonstrated impacts to marine wildlife support immediate implementation of source-reducing measures to decrease the potential risks of plastics in the marine ecosystem.

Plastics in the Marine Environment

Science.gov (United States)

Law, Kara Lavender

2017-01-01

Plastics contamination in the marine environment was first reported nearly 50 years ago, less than two decades after the rise of commercial plastics production, when less than 50 million metric tons were produced per year. In 2014, global plastics production surpassed 300 million metric tons per year. Plastic debris has been detected worldwide in all major marine habitats, in sizes from microns to meters. In response, concerns about risks to marine wildlife upon exposure to the varied forms of plastic debris have increased, stimulating new research into the extent and consequences of plastics contamination in the marine environment. Here, I present a framework to evaluate the current understanding of the sources, distribution, fate, and impacts of marine plastics. Despite remaining knowledge gaps in mass budgeting and challenges in investigating ecological impacts, the increasing evidence of the ubiquity of plastics contamination in the marine environment, the continued rapid growth in plastics production, and the evidence—albeit limited—of demonstrated impacts to marine wildlife support immediate implementation of source-reducing measures to decrease the potential risks of plastics in the marine ecosystem.

Evolution, plant breeding and biodiversity

Directory of Open Access Journals (Sweden)

Salvatore Ceccarelli

2011-11-01

Full Text Available This paper deals with changes in biodiversity during the course of evolution, plant domestication and plant breeding. It shows than man has had a strong influence on the progressive decrease of biodiversity, unconscious at first and deliberate in modern times. The decrease in biodiversity in the agricultures of the North causes a severe threat to food security and is in contrasts with the conservation of biodiversity which is part of the culture of several populations in the South. The concluding section of the paper shows that man could have guided evolution in a different way and shows an example of participatory plant breeding, a type of breeding which is done in collaboration with farmers and is based on selection for specific adaptation. Even though participatory plant breeding has been practiced for only about 20 years and by relatively few groups, the effects on both biodiversity and crop production are impressive. Eventually the paper shows how participatory plant breeding can be developed into ‘evolutionary plant breeding’ to cope in a dynamic way with climate changes.

International Center for Himalayan Biodiversity (ICHB): Conserving Himalayan Biodiversity--A Global Responsibility

Science.gov (United States)

Ram Bhandari

2006-01-01

Biodiversity is a global endowment of nature. Conservation of biodiversity includes all species of plants, animals and other organisms, the range of genetic stocks within each species, and ecosystem diversity. Food, many types of medicine and industrial products are provided by the biological resources that are the basis of life on Earth. The value of the Earth’s...

Accounting for biodiversity in the dairy industry.

Science.gov (United States)

Sizemore, Grant C

2015-05-15

Biodiversity is an essential part of properly functioning ecosystems, yet the loss of biodiversity currently occurs at rates unparalleled in the modern era. One of the major causes of this phenomenon is habitat loss and modification as a result of intensified agricultural practices. This paper provides a starting point for considering biodiversity within dairy production, and, although focusing primarily on the United States, findings are applicable broadly. Biodiversity definitions and assessments (e.g., indicators, tools) are proposed and reviewed. Although no single indicator or tool currently meets all the needs of comprehensive assessment, many sustainable practices are readily adoptable as ways to conserve and promote biodiversity. These practices, as well as potential funding opportunities are identified. Given the state of uncertainty in addressing the complex nature of biodiversity assessments, the adoption of generally sustainable environmental practices may be the best currently available option for protecting biodiversity on dairy lands. Copyright © 2015 Elsevier Ltd. All rights reserved.

Biodiversity in the City: Fundamental Questions for Understanding the Ecology of Urban Green Spaces for Biodiversity Conservation

Science.gov (United States)

Christopher A. Lepczyk; Myla F. J. Aronson; Karl L. Evans; Mark A. Goddard; Susannah B. Lerman; J. Scott MacIvor

2017-01-01

As urban areas expand, understanding how ecological processes function in cities has become increasingly important for conserving biodiversity. Urban green spaces are critical habitats to support biodiversity, but we still have a limited understanding of their ecology and how they function to conserve biodiversity at local and landscape scales across multiple taxa....

A landscape ecology approach identifies important drivers of urban biodiversity.

Science.gov (United States)

Turrini, Tabea; Knop, Eva

2015-04-01

Cities are growing rapidly worldwide, yet a mechanistic understanding of the impact of urbanization on biodiversity is lacking. We assessed the impact of urbanization on arthropod diversity (species richness and evenness) and abundance in a study of six cities and nearby intensively managed agricultural areas. Within the urban ecosystem, we disentangled the relative importance of two key landscape factors affecting biodiversity, namely the amount of vegetated area and patch isolation. To do so, we a priori selected sites that independently varied in the amount of vegetated area in the surrounding landscape at the 500-m scale and patch isolation at the 100-m scale, and we hold local patch characteristics constant. As indicator groups, we used bugs, beetles, leafhoppers, and spiders. Compared to intensively managed agricultural ecosystems, urban ecosystems supported a higher abundance of most indicator groups, a higher number of bug species, and a lower evenness of bug and beetle species. Within cities, a high amount of vegetated area increased species richness and abundance of most arthropod groups, whereas evenness showed no clear pattern. Patch isolation played only a limited role in urban ecosystems, which contrasts findings from agro-ecological studies. Our results show that urban areas can harbor a similar arthropod diversity and abundance compared to intensively managed agricultural ecosystems. Further, negative consequences of urbanization on arthropod diversity can be mitigated by providing sufficient vegetated space in the urban area, while patch connectivity is less important in an urban context. This highlights the need for applying a landscape ecological approach to understand the mechanisms shaping urban biodiversity and underlines the potential of appropriate urban planning for mitigating biodiversity loss. © 2015 John Wiley & Sons Ltd.

GLOBIL: WWF's Global Observation and Biodiversity Information Portal

Science.gov (United States)

Shapiro, A. C.; Nijsten, L.; Schmitt, S.; Tibaldeschi, P.

2015-04-01

Despite ever increasing availability of satellite imagery and spatial data, conservation managers, decision makers and planners are often unable to analyze data without special knowledge or software. WWF is bridging this gap by putting extensive spatial data into an easy to use online mapping environment, to allow visualization, manipulation and analysis of large data sets by any user. Consistent, reliable and repeatable ecosystem monitoring information for priority eco-regions is needed to increase transparency in WWF's global conservation work, to measure conservation impact, and to provide communications with the general public and organization members. Currently, much of this monitoring and evaluation data is isolated, incompatible, or inaccessible and not readily usable or available for those without specialized software or knowledge. Launched in 2013 by WWF Netherlands and WWF Germany, the Global Observation and Biodiversity Information Portal (GLOBIL) is WWF's new platform to unite, centralize, standardize and visualize geo-spatial data and information from more than 150 active GIS users worldwide via cloud-based ArcGIS Online. GLOBIL is increasing transparency, providing baseline data for monitoring and evaluation while communicating impacts and conservation successes to the public. GLOBIL is currently being used in the worldwide marine campaign as an advocacy tool for establishing more marine protected areas, and a monitoring interface to track the progress towards ocean protection goals. In the Kavango-Zambezi (KAZA) Transfrontier Conservation area, local partners are using the platform to monitor land cover changes, barriers to species migrations, potential human-wildlife conflict and local conservation impacts in vast wildlife corridor. In East Africa, an early warning system is providing conservation practitioners with real-time alerts of threats particularly to protected areas and World Heritage Sites by industrial extractive activities. And for

Urban lifestyle and urban biodiversity

DEFF Research Database (Denmark)

Petersen, L. K.; Lyytimäki, J.; Normander, B.

2007-01-01

This report is concerned with the relations between lifestyles of urban populations on one hand and protection of biodiversity in urban areas on the other. Urban areas are of importance for the general protection of biodiversity. In the surroundings of cities and within urban sprawls there can...... biodiversity, recreational, educational and other needs. However, uncovered and unsealed space is constantly under pressure for building and infrastructure development in the urban landscape, and the design and usages of urban green structure is a matter of differing interests and expectations. Integrating...... the green needs of urban lifestyle in the planning process does not come by itself. Nor does finding the synergies between urban lifestyle and urban biodiversity. Careful planning including stakeholder involvement is required. In this process various mapping techniques and use of indicators can be most...

Warfare in biodiversity hotspots.

Science.gov (United States)

Hanson, Thor; Brooks, Thomas M; Da Fonseca, Gustavo A B; Hoffmann, Michael; Lamoreux, John F; Machlis, Gary; Mittermeier, Cristina G; Mittermeier, Russell A; Pilgrim, John D

2009-06-01

Conservation efforts are only as sustainable as the social and political context within which they take place. The weakening or collapse of sociopolitical frameworks during wartime can lead to habitat destruction and the erosion of conservation policies, but in some cases, may also confer ecological benefits through altered settlement patterns and reduced resource exploitation. Over 90% of the major armed conflicts between 1950 and 2000 occurred within countries containing biodiversity hotspots, and more than 80% took place directly within hotspot areas. Less than one-third of the 34 recognized hotspots escaped significant conflict during this period, and most suffered repeated episodes of violence. This pattern was remarkably consistent over these 5 decades. Evidence from the war-torn Eastern Afromontane hotspot suggests that biodiversity conservation is improved when international nongovernmental organizations support local protected area staff and remain engaged throughout the conflict. With biodiversity hotspots concentrated in politically volatile regions, the conservation community must maintain continuous involvement during periods of war, and biodiversity conservation should be incorporated into military, reconstruction, and humanitarian programs in the world's conflict zones. ©2009 Society for Conservation Biology.

Core issues in the economics of biodiversity conservation.

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Tisdell, Clement A

2011-02-01

Economic evaluations are essential for assessing the desirability of biodiversity conservation. This article highlights significant advances in theories and methods of economic evaluation and their relevance and limitations as a guide to biodiversity conservation; considers the implications of the phylogenetic similarity principle for the survival of species; discusses consequences of the Noah's Ark problem for selecting features of biodiversity to be saved; analyzes the extent to which the precautionary principle can be rationally used to support the conservation of biodiversity; explores the impact of market extensions, market and other institutional failures, and globalization on biodiversity loss; examines the relationship between the rate of interest and biodiversity depletion; and investigates the implications of intergenerational equity for biodiversity conservation. The consequences of changes in biodiversity for sustainable development are given particular attention. © 2011 New York Academy of Sciences.

Biodiversity informatics: challenges and opportunities for applying biodiversity information to management and conservation

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James S. Kagan

2006-01-01

Researchers, land managers, and the public currently often are unable to obtain useful biodiversity information because the subject represents such a large component of biology and ecology, and systems to compile and organize this information do not exist. Information on vascular plant taxonomy, as addressed by the Global Biodiversity Information Facility and key...

Bridging the gap between biodiversity data and policy reporting needs: An essential biodiversity variables perspective

CSIR Research Space (South Africa)

Geijzendorffer, IR

2016-01-01

Full Text Available come from less biodiverse areas such as North America and 92 Europe rather than biodiversity-rich areas such as some parts of the tropics (Collen et al. 2008; Mora et 93 al. 2008; Pereira et al. 2012) and developing countries (Butchart et al. 2010... provision, EBVs 349 for other specific ecosystem functions were missing (e.g., pollination or soil decomposition rates). 350 351 This analysis also highlighted that reporting required additional indicators on non-biodiversity variables, 352...

Spatial patterns of agricultural expansion determine impacts on biodiversity and carbon storage.

Science.gov (United States)

Chaplin-Kramer, Rebecca; Sharp, Richard P; Mandle, Lisa; Sim, Sarah; Johnson, Justin; Butnar, Isabela; Milà I Canals, Llorenç; Eichelberger, Bradley A; Ramler, Ivan; Mueller, Carina; McLachlan, Nikolaus; Yousefi, Anahita; King, Henry; Kareiva, Peter M

2015-06-16

The agricultural expansion and intensification required to meet growing food and agri-based product demand present important challenges to future levels and management of biodiversity and ecosystem services. Influential actors such as corporations, governments, and multilateral organizations have made commitments to meeting future agricultural demand sustainably and preserving critical ecosystems. Current approaches to predicting the impacts of agricultural expansion involve calculation of total land conversion and assessment of the impacts on biodiversity or ecosystem services on a per-area basis, generally assuming a linear relationship between impact and land area. However, the impacts of continuing land development are often not linear and can vary considerably with spatial configuration. We demonstrate what could be gained by spatially explicit analysis of agricultural expansion at a large scale compared with the simple measure of total area converted, with a focus on the impacts on biodiversity and carbon storage. Using simple modeling approaches for two regions of Brazil, we find that for the same amount of land conversion, the declines in biodiversity and carbon storage can vary two- to fourfold depending on the spatial pattern of conversion. Impacts increase most rapidly in the earliest stages of agricultural expansion and are more pronounced in scenarios where conversion occurs in forest interiors compared with expansion into forests from their edges. This study reveals the importance of spatially explicit information in the assessment of land-use change impacts and for future land management and conservation.

Drastic underestimation of amphipod biodiversity in the endangered Irano-Anatolian and Caucasus biodiversity hotspots.