Origin of Somatic Mutations in β-Catenin versus Adenomatous Polyposis Coli in Colon Cancer: Random Mutagenesis in Animal Models versus Nonrandom Mutagenesis in Humans.

Science.gov (United States)

Yang, Da; Zhang, Min; Gold, Barry

2017-07-17

Wnt signaling is compromised early in the development of human colorectal cancer (CRC) due to truncating nonsense mutations in adenomatous polyposis coli (APC). CRC induced by chemical carcinogens, such as heterocyclic aromatic amines and azoxymethane, in mice also involves dysregulation of Wnt signaling but via activating missense mutations in the β-catenin oncogene despite the fact that genetically modified mice harboring an inactive APC allele efficiently develop CRC. In contrast, activating mutations in β-catenin are rarely observed in human CRC. Dysregulation of the Wnt signaling pathway by the two distinct mechanisms reveals insights into the etiology of human CRC. On the basis of calculations related to DNA adduct levels produced in mouse CRC models using mutagens, and the number of stem cells in the mouse colon, we show that two nonsense mutations required for biallelic disruption of APC are statistically unlikely to produce CRC in experiments using small numbers of mice. We calculate that an activating mutation in one allele near the critical GSK3β phosphorylation site on β-catenin is >10 5 -times more likely to produce CRC by random mutagenesis due to chemicals than inactivating two alleles in APC, yet it does not occur in humans. Therefore, the mutagenesis mechanism in human CRC cannot be random. We explain that nonsense APC mutations predominate in human CRC because of deamination at 5-methylcytosine at CGA and CAG codons, coupled with the number of human colonic stem cells and lifespan. Our analyses, including a comparison of mutation type and age at CRC diagnosis in U.S. and Chinese patients, also indicate that APC mutations in CRC are not due to environmental mutagens that randomly damage DNA.

HydroHillChart – Francis module. Software used to Calculate the Hill Chart of the Francis Hydraulic Turbines

Directory of Open Access Journals (Sweden)

Dorian Nedelcu

2015-07-01

Full Text Available The paper presents the Hydro Hill Chart - Francis module application, used to calculate the hill chart of the Pelton, Francis and Kaplan hydraulic turbine models, by processing the data measured on the stand. After describing the interface and menu, the input data is graphically presented and the universal characteristic for measuring scenarios ao=const. and n11=const is calculated. Finally, the two calculated hill charts are compared through a graphical superimposition of the isolines.

27 CFR 9.190 - Red Hill Douglas County, Oregon.

Science.gov (United States)

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Red Hill Douglas County... Areas § 9.190 Red Hill Douglas County, Oregon. (a) Name. The name of the viticultural area described in this section is “Red Hill Douglas County, Oregon”. For purposes of part 4 of this chapter, “Red Hill...

Seafloor Age-Stacking Reveals No Evidence for Milankovitch Cycle Influence on Abyssal Hills at Intermediate, Fast and Super-Fast Spreading Rates

Science.gov (United States)

Goff, J.; Zahirovic, S.; Müller, D.

2017-12-01

Recently published spectral analyses of seafloor bathymetry concluded that abyssal hills, highly linear ridges that are formed along seafloor spreading centers, exhibit periodicities that correspond to Milankovitch cycles - variations in Earth's orbit that affect climate on periods of 23, 41 and 100 thousand years. These studies argue that this correspondence could be explained by modulation of volcanic output at the mid-ocean ridge due to lithostatic pressure variations associated with rising and falling sea level. If true, then the implications are substantial: mapping the topography of the seafloor with sonar could be used as a way to investigate past climate change. This "Milankovitch cycle" hypothesis predicts that the rise and fall of abyssal hills will be correlated to crustal age, which can be tested by stacking, or averaging, bathymetry as a function of age; stacking will enhance any age-dependent signal while suppressing random components, such as fault-generated topography. We apply age-stacking to data flanking the Southeast Indian Ridge ( 3.6 cm/yr half rate), northern East Pacific Rise ( 5.4 cm/yr half rate) and southern East Pacific Rise ( 7.8 cm/yr half rate), where multibeam bathymetric coverage is extensive on the ridge flanks. At the greatest precision possible given magnetic anomaly data coverage, we have revised digital crustal age models in these regions with updated axis and magnetic anomaly traces. We also utilize known 2nd-order spatial statistical properties of abyssal hills to predict the variability of the age-stack under the null hypothesis that abyssal hills are entirely random with respect to crustal age; the age-stacked profile is significantly different from zero only if it exceeds this expected variability by a large margin. Our results indicate, however, that the null hypothesis satisfactorily explains the age-stacking results in all three regions of study, thus providing no support for the Milankovitch cycle hypothesis. The

The breeding of Japonica Yanjing 10 rice mutant induced by space mutation

International Nuclear Information System (INIS)

Wang Jianhua; Chen Xiulan; Zhang Rong; Wang Jinrong; Liu Jian; Jiao Juan; He Zhentian; Wang Lin

2011-01-01

The dry seed of mid-maturing Japonica rice Yanjing 10 was used for space mutation breeding which was carried by a satellite for 15 days in 2006. Through three generations of breeding, a group of mutants were obtained. In the article, we reported in detail the breeding procedures, proposed the breeding technical method for space mutation for rice improvement. Planting multiple seedlings per hill to prohibit tillering at SP 1 generation, and bulked selection in combination with directional selection at the SP 2 ∼ SP 3 generation were the two key points of the breeding methods. (authors)

HydroHillChart – Pelton module. Software used to Calculate the Hill Chart of the Pelton Hydraulic Turbines

OpenAIRE

Dorian Nedelcu; Adelina Bostan; Florin Peris-Bendu

2015-01-01

The paper presents the HydroHillChart - Pelton module application, used to calculate the hill chart of the Pelton hydraulic turbine models, by processing the data measured on the stand. In addition, the tools offered by the application such as: interface, menu, input data, numerical and graphical results, etc. are described.

Confidence Hills Mineralogy and Chemin Results from Base of Mt. Sharp, Pahrump Hills, Gale Crater, Mars

Science.gov (United States)

Cavanagh, P. D.; Bish, D. L.; Blake, D. F.; Vaniman, D. T.; Morris, R. V.; Ming, D. W.; Rampe, E. B.; Achilles, C. N.; Chipera, S. J.; Treiman, A. H.;

The Bradford Hill considerations on causality: a counterfactual perspective

Directory of Open Access Journals (Sweden)

Höfler Michael

2005-11-01

Full Text Available Abstract Bradford Hill's considerations published in 1965 had an enormous influence on attempts to separate causal from non-causal explanations of observed associations. These considerations were often applied as a checklist of criteria, although they were by no means intended to be used in this way by Hill himself. Hill, however, avoided defining explicitly what he meant by "causal effect". This paper provides a fresh point of view on Hill's considerations from the perspective of counterfactual causality. I argue that counterfactual arguments strongly contribute to the question of when to apply the Hill considerations. Some of the considerations, however, involve many counterfactuals in a broader causal system, and their heuristic value decreases as the complexity of a system increases; the danger of misapplying them can be high. The impacts of these insights for study design and data analysis are discussed. The key analysis tool to assess the applicability of Hill's considerations is multiple bias modelling (Bayesian methods and Monte Carlo sensitivity analysis; these methods should be used much more frequently.

HydroHillChart – Pelton module. Software used to Calculate the Hill Chart of the Pelton Hydraulic Turbines

Directory of Open Access Journals (Sweden)

Dorian Nedelcu

2015-07-01

Full Text Available The paper presents the HydroHillChart - Pelton module application, used to calculate the hill chart of the Pelton hydraulic turbine models, by processing the data measured on the stand. In addition, the tools offered by the application such as: interface, menu, input data, numerical and graphical results, etc. are described.

The Camp Hill Project: Objectives and Design

Science.gov (United States)

Mattingly, John B.

1976-01-01

Available from: EC 090 474. Outlined are the problems and objectives of Pennsylvania's Camp Hill Project--a program designed to complete psychological needs assessments for juveniles incarcerated at Camp Hill, to develop project policies and guidelines in preparation for meeting with juvenile court judges, and to hire staff. (SBH)

Accounting for imperfect detection in Hill numbers for biodiversity studies

Science.gov (United States)

Broms, Kristin M.; Hooten, Mevin B.; Fitzpatrick, Ryan M.

2015-01-01

Hill numbers unify biodiversity metrics by combining several into one expression. For example, species richness, Shannon's diversity index and the Gini–Simpson index are a few of the most used diversity measures, and they can be expressed as Hill numbers. Traditionally, Hill numbers have been calculated from relative abundance data, but the expression has been modified to use incidence data as well. We demonstrate an approach for estimating Hill numbers using an occupancy modelling framework that accounts for imperfect detection.

A language for image processing HILLS and its supporting system SDIP

International Nuclear Information System (INIS)

Suzuki, H.; Toriwaki, J.

1984-01-01

This paper presents a language HILLS and its supporting system SDIP for image processing. HILLS is a key-word type language for describing image processing procedures by using subroutine packages SLIP and SPIDER. SDIP, written in FORTRAN to keep portability, supports programming by HILLS in interactive mode including functions such as editing, translating HILLS into FORTRAN, error detection, and providing manual information. Results of preliminary experiments suggest that HILLS and SDIP are very useful tools for beginners and researchers in application fields of image processing to develop desired image analysis procedures

27 CFR 9.162 - Sta. Rita Hills.

Science.gov (United States)

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Sta. Rita Hills. 9.162.... Rita Hills. (a) Name. The name of the viticultural area described in this section is “Sta. Rita Hills”. For purposes of part 4 of this chapter, “Sta. Rita Hills” is a term of viticultural significance. (b...

Biogeography of the Shimba Hills ecosystem herpetofauna in Kenya.

Science.gov (United States)

Malonza, Patrick K; Mulwa, David M; Nyamache, Joash O; Jones, Georgina

2018-03-18

The Shimba Hills ecosystem along the south coast of Kenya is a key East African biodiversity hotspot. Historically, it is biogeographically assignable to the East African coastal biome. We examined the current Shimba Hills herpetofauna and their zoogeographical affinities to the coastal forests and nearby Eastern Arc Mountains biodiversity hotspots. The key studied sites included the Shimba Hills National Reserve, forest reserves, Kaya forests, and adjacent private land. Data on herpetofaunal richness were obtained from recent field surveys, literature, and specimens held at the National Museums of Kenya, Herpetology Section Collection, Nairobi. The Makadara, Mwele, and Longo-Mwagandi forests within the Shimba Hills National Reserve hosted the highest number of unique and rare species. Generally, the forest reserves and Kaya forests were important refuges for forest-associated species. On private land, Mukurumudzi Dam riparian areas were the best amphibian habitat and were host to three IUCN (Red List) Endangered-EN amphibian species, namely, Boulengerula changamwensis, Hyperolius rubrovermiculatus, and Afrixalus sylvaticus, as well as one snake species Elapsoidea nigra. Using herpetofauna as zoogeographic indicators, the Shimba Hills were determined to be at a crossroads between the coastal forests (13 endemic species) and the Eastern Arc Mountains (seven endemic species). Most of the Eastern Arc Mountains endemic species were from recent records, and thus more are likely to be found in the future. This 'hybrid' species richness pattern is attributable to the hilly topography of the Shimba Hills and their proximity to the Indian Ocean. This has contributed to the Shimba Hills being the richest herpetofauna area in Kenya, with a total of 89 and 36 reptile and amphibian species, respectively. Because of its unique zoogeography, the Shimba Hills ecosystem is undoubtedly a key biodiversity area for conservation investment.

Audio-magnetotelluric (AMT) study to investigate the genesis of Mujil hill

Science.gov (United States)

Rahmania, Suryanto, Wiwit

2017-07-01

Gunung Mujil is an isolated hill located near Pondoworejo village, Kalibawang sub-district, Kulon Progo district, and Special Province of Yogyakarta. The hill is part of the eastern Kulon Progo mountain range extended relatively in the North-South direction. The lithology of the hill consists of andesite breccia and it's similar with the Old Andesite Formation that built the Kulon Progo Mountains. There are at least two hypothesis about the genesis and the formation mechanism of this hill, (1) it was formed by debris mass from Kulon Progo Mountains, and (2) ) it was formed by an intrusion. Our study intended to determine the subsurface resistivity below the hill and to relating those results to with the scenario of the genesis of the Mujil hill. We conducted Audio-magnetotellurics (AMT) measurements along two lines survey crossing the Mujil hill consisting of 20 measurements. Since the measurements are located near the villages, most of the data has a fair to bad quality and only one station yielded an excellent data. A 1D Forward modeling was then applied to find best-fit model of the AMT data. The results shows that the Mujil hill was built by debris mass of the Old Andesite Formation from Kulon Progo mountain which is represented by a lower resistivity value under the Mujil hill.

Hume, Mill, Hill, and the sui generis epidemiologic approach to causal inference.

Science.gov (United States)

Morabia, Alfredo

2013-11-15

The epidemiologic approach to causal inference (i.e., Hill's viewpoints) consists of evaluating potential causes from the following 2, noncumulative angles: 1) established results from comparative, observational, or experimental epidemiologic studies; and 2) reviews of nonepidemiologic evidence. It does not involve statements of statistical significance. The philosophical roots of Hill's viewpoints are unknown. Superficially, they seem to descend from the ideas of Hume and Mill. Hill's viewpoints, however, use a different kind of evidence and have different purposes than do Hume's rules or Mill's system of logic. In a nutshell, Hume ignores comparative evidence central to Hill's viewpoints. Mill's logic disqualifies as invalid nonexperimental evidence, which forms the bulk of epidemiologic findings reviewed from Hill's viewpoints. The approaches by Hume and Mill cannot corroborate successful implementations of Hill's viewpoints. Besides Hume and Mill, the epidemiologic literature is clueless about a plausible, pre-1965 philosophical origin of Hill's viewpoints. Thus, Hill's viewpoints may be philosophically novel, sui generis, still waiting to be validated and justified.

Weak Properties and Robustness of t-Hill Estimators

Czech Academy of Sciences Publication Activity Database

Jordanova, P.; Fabián, Zdeněk; Hermann, P.; Střelec, L.; Rivera, A.; Girard, S.; Torres, S.; Stehlík, M.

2016-01-01

Roč. 19, č. 4 (2016), s. 591-626 ISSN 1386-1999 Institutional support: RVO:67985807 Keywords : asymptotic properties of estimators * point estimation * t-Hill estimator * t-lgHill estimator Subject RIV: BB - Applied Statistics, Operational Research Impact factor: 1.679, year: 2016

The man and the hill

Science.gov (United States)

Leopold, Luna Bergere

1962-01-01

He was sitting on a large slab of rock. As he looked at the cloud of dust hanging hazily on the horizon, the piece of antler and the block of flint he held in his hand hung as if they were suspended from their previous rapid motion. The man gazed intently across the swaying grass which rose in wave-like billows across the distant hills. What was that dust - a herd of buffalo, a band of hunters, or were coyotes chasing the antelope again? After watching for a while he started again to chip the flint with a rapid twisting motion of the bone in his right hand. The little chips of flint fell in the grass before him. It is the same hill but the scene has changed. Seated on the same rock, holding the reins of a saddle horse, a man dressed in buckskin took the fur cap off his head and wiped his brow. He was looking intently across a brown and desolate landscape at a cloud of dust on the far horizon. Was it the hostile tribe of Indians? It could be buffalo. Nervously he kicked at the ground with the deerhide moccasin, pushing the flint chips out of the way. He wiped the dust from his long rifle. What a terrible place - no water, practically no grass, everything bare and brown. Now at sunset, slanting across the hills green with springtime, a cowman sits on a big rock, pushes his sombrero back on his head, and looks across the valley at a large but quiet herd of stock, moving slowly as each steer walks from one lush patch of grass to another, nibbling. Suddenly he stood up. Far on the horizon some dark objects were moving. Is it the sheepmen? Could it be the stage coach from Baggs to the Sweetwater Crossing?Same hill - a gray truck was grinding slowly toward the summit. It pulled up near a small fenced enclosure where there were some instruments painted a bright silver color. A man stepped out of the truck and turned to his younger companion, "You've never found an arrowhead? Maybe you have never thought about it correctly. If you want to find where an Indian camped long

The mathematics of random mutation and natural selection for multiple simultaneous selection pressures and the evolution of antimicrobial drug resistance.

Science.gov (United States)

Kleinman, Alan

2016-12-20

The random mutation and natural selection phenomenon act in a mathematically predictable behavior, which when understood leads to approaches to reduce and prevent the failure of the use of these selection pressures when treating infections and cancers. The underlying principle to impair the random mutation and natural selection phenomenon is to use combination therapy, which forces the population to evolve to multiple selection pressures simultaneously that invoke the multiplication rule of probabilities simultaneously as well. Recently, it has been seen that combination therapy for the treatment of malaria has failed to prevent the emergence of drug-resistant variants. Using this empirical example and the principles of probability theory, the derivation of the equations describing this treatment failure is carried out. These equations give guidance as to how to use combination therapy for the treatment of cancers and infectious diseases and prevent the emergence of drug resistance. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Penyelesaian Masalah 8-Puzzle dengan Algoritma Steepest-Ascent Hill Climbing

Directory of Open Access Journals (Sweden)

David Abraham

2016-03-01

Full Text Available 8 puzzle merupakan salah satu implementasi dari Artificial Intelegence. Dalam proses penyelesaiannya banyak terdapat algoritma-algoritma pencarian yang dapat diterapkan. Solusi 8 puzzle akan lebih cepat diperoleh jika digunakan prinsip array dengan variasi algoritma Steepest-Ascent Hill Climbing (Hill Climbing dengan memilih kemiringan yang paling tajam / curam dengan parameter heuristik posisi yang benar dan heuristik jarak serta dikombinasikan dengan LogList sebagai penyimpanan state state yang pernah dilalui untuk menanggulangi permasalah pada algoritma hill climbing itu sendiri dan terhindar dari looping state yang pernah dilalui. Metode-metode yang termasuk ke dalam teknik pencarian yang berdasarkan pada fungsi heuristik salah satu diantaranya adalah Hill Climbing, Best First Search, A* (A Bintang. Loglist merupakan tempat penyimpanan setiap kunjungan dari state-state puzzle yang telah dilakukan untuk menghindari looping atau pengulangan terhadap state yang pernah dilalui. Untuk menanggulangi permasalahan pada SteepestAscent Hill Climbing.

Relationship between Income-poverty and Food insecurity in Rural Far-western Mid-hills of Nepal

OpenAIRE

Maharjan, Keshav Lall; Joshi, Niraj Prakash

2009-01-01

For the purpose of this study, sample was selected through stratified random sampling from Baitadi district, which falls in rural Far-western Hills of Nepal. Both income and consumption measure of poverty revealed that problem of poverty is more severe in Melauli, which is relatively remote village devoid of transportation, communication, market, and other developmental services. Education, occupation, gender of household head, and family size are found to be the most important factors that a...

Newtonian and pseudo-Newtonian Hill problem

International Nuclear Information System (INIS)

Steklain, A.F.; Letelier, P.S.

2006-01-01

A pseudo-Newtonian Hill problem based on the Paczynski-Wiita pseudo-Newtonian potential that reproduces general relativistic effects is presented and compared with the usual Newtonian Hill problem. Poincare maps, Lyapunov exponents and fractal escape techniques are employed to study bounded and unbounded orbits. In particular we consider the systems composed by Sun, Earth and Moon and composed by the Milky Way, the M2 cluster and a star. We find that some pseudo-Newtonian systems-including the M2 system-are more stable than their Newtonian equivalent

Spectral parameter power series representation for Hill's discriminant

International Nuclear Information System (INIS)

Khmelnytskaya, K.V.; Rosu, H.C.

2010-01-01

We establish a series representation of the Hill discriminant based on the spectral parameter power series (SPPS) recently introduced by Kravchenko. We also show the invariance of the Hill discriminant under a Darboux transformation and employing the Mathieu case the feasibility of this type of series for numerical calculations of the eigenspectrum.

Plants profile of Malakand Pass Hills, District Malakand, Pakistan

African Journals Online (AJOL)

use

2011-11-21

Nov 21, 2011 ... famous Malakand fort guards the road on both sides of the pass. Malakand is a ... Underneath Malakand Hills, the waters of the River Swat ... southern sloping faces of the hills. They speak ...... Pinus roxburghii Sarg. Antidote ...

Experimental investigation of flow over two-dimensional multiple hill models.

Science.gov (United States)

Li, Qing'an; Maeda, Takao; Kamada, Yasunari; Yamada, Keisuke

2017-12-31

The aim of this study is to investigate the flow field characteristics in ABL (Atmospheric Boundary Layer) flow over multiple hills and valleys in two-dimensional models under neutral conditions. Active turbulence grids and boundary layer generation frame were used to simulate the natural winds in wind tunnel experiments. As a result, the mean wind velocity, the velocity vector diagram and turbulence intensity around the hills were investigated by using a PIV (Particle Image Velocimetry) system. From the measurement results, it was known that the average velocity was increased along the upstream slope of upside hill, and then separated at the top of the hills, the acceleration region of U/U ref >1 was generated at the downstream of the hill. Meanwhile, a large clockwise circulation flow was generated between the two hill models. Moreover, the turbulence intensity showed small value in the circulation flow regions. Compared to 1H model, the turbulence intensity in the mainstream direction showed larger value than that in the vertical direction. This paper provided a better understanding of the wind energy distribution on the terrain for proper selection of suitable sites for installing wind farms in the ABL. Copyright © 2017 Elsevier B.V. All rights reserved.

A fitness landscape approach to technological complexity, modularity, and vertical disintegration

NARCIS (Netherlands)

Frenken, K.

2006-01-01

The biological evolution of complex organisms, in which the functioning of genes is interdependent, has been analysed as "hill-climbing" on NK fitness landscapes through random mutation and natural selection [Kauffman, S.A., 1993. The Origins of Order. Self-organization and Selection in Evolution.

Phosphorus forms in soils of Oban Hills, Akamkpa, Cross River State ...

African Journals Online (AJOL)

Oban Hills is located at Akamkpa in the Southern Senatorial District of Cross River, State, Nigeria. Phosphorus (P)-rich soil from the Hills is expected to have an effect on retention and distribution in the highly acidic soils surrounding the area inundated for several years. Phosphorus forms in the soils of the Hills varied with ...

Photovoltaics - 10 years after Cherry Hill

Science.gov (United States)

Ralph, E. L.

The status of R&D programs connected with photovoltaic (PV) systems 10 years after the Cherry Hill workshop on 'Photovoltaic Conversion of Solar Energy for Terrestrial Applications' is assessed. The five categories of research recommended by the Cherry Hill Workshop are listed in a table together with their recommended research budget allocations. The workshop categories include: single-crystal Si cells; poly-Si cells; systems and diagnostics. Categories for thin film CdS/Cu2S and CuInSe2 cells are also included. The roles of government and private utility companies in providing adequate financial support for PV research programs is emphasized.

78 FR 73187 - Black Hills National Forest Advisory Board

Science.gov (United States)

2013-12-05

... DEPARTMENT OF AGRICULTURE Forest Service Black Hills National Forest Advisory Board AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The Black Hills National Forest Advisory Board (Board... all members of the Advisory Board; (2) provide orientation to Board Members on Basic Laws governing...

Funny hills in pion spectra from heavy-ion collisions

International Nuclear Information System (INIS)

Rasmussen, J.O.

1982-03-01

A discussion of some of the systematic features of the pion spectra in heavy-ions reactions is given. A discussion of the hills and valleys in heavy ion pion spectra that show up at the lower pion energies is given. The following topics are discussed: (1) three kinds of funny hills; (2) π - / + ratios near center of mass; (3) new Monte Carlo studies of charged pion spectra; and (4) pion orbiting about fireballs and Bose-Einstein behavior as explanation for the mid-rapidity P/sub perpendicular to/ approx. = 0.4 to 0.5 m/sub π/c hill

Modified meta-heuristics using random mutation for truss topology optimization with static and dynamic constraints

Directory of Open Access Journals (Sweden)

Vimal J. Savsani

2017-04-01

The static and dynamic responses to the TTO problems are challenging due to its search space, which is implicit, non-convex, non-linear, and often leading to divergence. Modified meta-heuristics are effective optimization methods to handle such problems in actual fact. In this paper, modified versions of Teaching–Learning-Based Optimization (TLBO, Heat Transfer Search (HTS, Water Wave Optimization (WWO, and Passing Vehicle Search (PVS are proposed by integrating the random mutation-based search technique with them. This paper compares the performance of four modified and four basic meta-heuristics to solve discrete TTO problems.

EMG activities and plantar pressures during ski jumping take-off on three different sized hills.

Science.gov (United States)

Virmavirta, M; Perttunen, J; Komi, P V

2001-04-01

Different profiles of ski jumping hills have been assumed to make the initiation of take-off difficult especially when moving from one hill to another. Neuromuscular adaptation of ski jumpers to the different jumping hills was examined by measuring muscle activation and plantar pressure of the primary take-off muscles on three different sized hills. Two young ski jumpers volunteered as subjects and they performed several trials from each hill (K-35 m, K-65 m and K-90 m) with the same electromyographic (EMG) electrode and insole pressure transducer set-up. The results showed that the differences in plantar pressure and EMGs between the jumping hills were smaller than expected for both jumpers. The small changes in EMG amplitudes between the hills support the assumption that the take-off was performed with the same intensity on different jumping hills and the timing of the gluteus EMG demonstrates well the similarity of the muscle activation on different hills. On the basis of the results obtained it seems that ski jumping training on small hills does not disturb the movement patterns for bigger hills and can also be helpful for special take-off training with low speed.

Random mtDNA mutations modulate proliferation capacity in mouse embryonic fibroblasts

International Nuclear Information System (INIS)

Kukat, Alexandra; Edgar, Daniel; Bratic, Ivana; Maiti, Priyanka; Trifunovic, Aleksandra

2011-01-01

Highlights: → Increased mtDNA mutations in MEFs lead to high level of spontaneous immortalization. → This process is independent of endogenous ROS production. → Aerobic glycolysis significantly contributes to spontaneous immortalization of MEFs. -- Abstract: An increase in mtDNA mutation load leads to a loss of critical cells in different tissues thereby contributing to the physiological process of organismal ageing. Additionally, the accumulation of senescent cells that display changes in metabolic function might act in an active way to further disrupt the normal tissue function. We believe that this could be the important link missing in our understanding of the molecular mechanisms of premature ageing in the mtDNA mutator mice. We tested proliferation capacity of mtDNA mutator cells in vitro. When cultured in physiological levels of oxygen (3%) their proliferation capacity is somewhat lower than wild-type cells. Surprisingly, in conditions of increased oxidative stress (20% O 2 ) mtDNA mutator mouse embryonic fibroblasts exhibit continuous proliferation due to spontaneous immortalization, whereas the same conditions promote senescence in wild-type cells. We believe that an increase in aerobic glycolysis observed in mtDNA mutator mice is a major mechanism behind this process. We propose that glycolysis promotes proliferation and allows a fast turnover of metabolites, but also leads to energy crisis due to lower ATP production rate. This could lead to compromised replication and/or repair and therefore, in rare cases, might lead to mutations in tumor suppressor genes and spontaneous immortalization.

Effect of decision aid for breast cancer prevention on decisional conflict in women with a BRCA1 or BRCA2 mutation: a multisite, randomized, controlled trial.

Science.gov (United States)

Metcalfe, Kelly A; Dennis, Cindy-Lee; Poll, Aletta; Armel, Susan; Demsky, Rochelle; Carlsson, Lindsay; Nanda, Sonia; Kiss, Alexander; Narod, Steven A

2017-03-01

Women with a BRCA1 or BRCA2 mutation are at high risk for breast cancer and must make important decisions about breast cancer prevention and screening. In the current study, we report a multisite, randomized, controlled trial evaluating the effectiveness of a decision aid for breast cancer prevention in women with a BRCA mutation with no previous diagnosis of cancer. Within 1 month of receiving a positive BRCA result, women were randomized to receive either usual care (control group) or decision aid (intervention group). Participants were followed at 3, 6, and 12 months; were asked about preventive measures; and completed standardized questionnaires assessing decision making and psychosocial functioning. One hundred fifty women were randomized. Mean cancer-related distress scores were significantly lower in the intervention group compared with the control group at 6 months (P = 0.01) and at 12 months postrandomization (P = 0.05). Decisional conflict scores declined over time for both groups and at no time were there statistical differences between the two groups. The decision aid for breast cancer prevention in women with a BRCA1 or BRCA2 mutation is effective in significantly decreasing cancer-related distress within the year following receipt of positive genetic test results.Genet Med 19 3, 330-336.

Hill, Prof. Archibald Vivian

Indian Academy of Sciences (India)

Home; Fellowship. Fellow Profile. Elected: 1935 Honorary. Hill, Prof. Archibald Vivian Nobel Laureate (Medicine) - 1922. Date of birth: 26 September 1886. Date of death: 3 June 1977. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

The montane forest associated amphibian species of the Taita Hills ...

African Journals Online (AJOL)

The montane forest associated amphibian species of the Taita Hills, Kenya. ... They are surrounded by the dry Tsavo plains. ... The biodiversity importance of the Taita Hills lies with the number of endemics per unit of area of remaining forest, ...

Are hills like white elephants?

Directory of Open Access Journals (Sweden)

Sunil Sharma

2016-11-01

Full Text Available 'Are Hills Like White Elephants?' is, of course, inspired by Hemingway; the tribute reflects on the abiding relevance of serious art in a changed world and extends the boundaries of his message to other human situations.

Late Devonian spermatophyte diversity and paleoecology at Red Hill, north-central Pennsylvania, USA

Energy Technology Data Exchange (ETDEWEB)

Cressler, Walter L. III. [Francis Harvey Green Library, 29 West Rosedale Avenue, West Chester University, West Chester, PA, 19383 (United States); Prestianni, Cyrille [Universite de Liege, Boulevard du Rectorat B18, Liege 4000 (Belgium); LePage, Ben A. [The Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA, 19103 and PECO Energy Company, 2301 Market Avenue, S9-1, Philadelphia, PA 19103 (United States)

2010-08-01

Early spermatophytes have been discovered at Red Hill, a Late Devonian (Famennian) fossil locality in north-central Pennsylvania, USA. The Red Hill locality contains an Archaeopteris-dominated flora within an outcrop of the Duncannon Member of the Catskill Formation. Palynological analyses of the plant fossil-bearing horizons within the Red Hill outcrop indicate deposition within the VCo palynozone. This is the earliest time horizon known to contain evidence for spermatophytes, and is contemporaneous with well-known spermatophyte-bearing deposits in West Virginia and Belgium. Some of the spermatophyte material from Red Hill compares well with Aglosperma sp., previously known as isolated ovules from the latest Devonian of South Wales and England, thus extending its geographic and stratigraphic range. Red Hill specimens of Aglosperma sp. occur both as isolated ovules and attached to dichotomously forking axes. Additional spermatophyte cupules discovered at Red Hill are morphologically similar to those of the previously described Late Devonian spermatophytes Elkinsia Rothwell, Scheckler, et Gillespie, Moresnetia Stockmans, and Xenotheca Arber et Goode. Some of the Red Hill cupule complexes are distinct from the aforementioned taxa in consisting of slender dichotomously forking axes terminating in paired cupules with highly fused and symmetric cupule quadrant lobes. The distinctive nature of these Red Hill specimens warrants the creation of Duodimidia pfefferkornii Cressler, Prestianni, et LePage gen. et sp. nov. Plant fossil remains with sphenopteroid foliage are also present at Red Hill, possibly attributable to the spermatophytes. Previous systematic sampling of the rich plant-fossil bearing layer at Red Hill and analysis of its floristic diversity and abundance as well as the presence and absence of charcoal suggests a pattern of floral turnover from a local-scale Rhacophyton-dominated community to spermatophyte colonization following disturbance by wildfires

The directed mutation controversy and neo-Darwinism.

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Lenski, R E; Mittler, J E

1993-01-08

According to neo-Darwinian theory, random mutation produces genetic differences among organisms whereas natural selection tends to increase the frequency of advantageous alleles. However, several recent papers claim that certain mutations in bacteria and yeast occur at much higher rates specifically when the mutant phenotypes are advantageous. Various molecular models have been proposed that might explain these directed mutations, but the models have not been confirmed. Critics contend that studies purporting to demonstrate directed mutation lack certain controls and fail to account adequately for population dynamics. Further experiments that address these criticisms do not support the existence of directed mutations.

The origin of Mauna Loa's Nīnole Hills: Evidence of rift zone reorganization

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Zurek, Jeffrey; Williams-Jones, Glyn; Trusdell, Frank A.; Martin, Simon

2015-01-01

In order to identify the origin of Mauna Loa volcano's Nīnole Hills, Bouguer gravity was used to delineate density contrasts within the edifice. Our survey identified two residual anomalies beneath the Southwest Rift Zone (SWRZ) and the Nīnole Hills. The Nīnole Hills anomaly is elongated, striking northeast, and in inversions both anomalies merge at approximately −7 km above sea level. The positive anomaly, modeled as a rock volume of ~1200 km3 beneath the Nīnole Hills, is associated with old eruptive vents. Based on the geologic and geophysical data, we propose that the gravity anomaly under the Nīnole Hills records an early SWRZ orientation, now abandoned due to geologically rapid rift-zone reorganization. Catastrophic submarine landslides from Mauna Loa's western flank are the most likely cause for the concurrent abandonment of the Nīnole Hills section of the SWRZ. Rift zone reorganization induced by mass wasting is likely more common than currently recognized.

Wine Industry Competitiveness: A survey of the Shawnee Hills American Viticultural Area

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C. Matthew Rendleman

2016-06-01

Shawnee Hill׳s AVA winery owner/operators regard increases in regional tourism, growth in the US wine market continuous innovation, unique services and processes, and flow of information from customers to have the most enhancing effects on their businesses, and that confidence/trust in Illinois state political systems, tax systems, and administrative/bureaucratic regulations were the most constraining factors. Furthermore the Shawnee Hills AVA has growing competition, yet consists of innovative winery owners. It may currently lack external financial support, but with a community focus on product differentiation, the Shawnee Hills AVA has a chance, owners believe, to capture a portion of the growing market for regional products.

Theory of synergistic effects: Hill-type response surfaces as 'null-interaction' models for mixtures.

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Schindler, Michael

2017-08-02

The classification of effects caused by mixtures of agents as synergistic, antagonistic or additive depends critically on the reference model of 'null interaction'. Two main approaches are currently in use, the Additive Dose (ADM) or concentration addition (CA) and the Multiplicative Survival (MSM) or independent action (IA) models. We compare several response surface models to a newly developed Hill response surface, obtained by solving a logistic partial differential equation (PDE). Assuming that a mixture of chemicals with individual Hill-type dose-response curves can be described by an n-dimensional logistic function, Hill's differential equation for pure agents is replaced by a PDE for mixtures whose solution provides Hill surfaces as 'null-interaction' models and relies neither on Bliss independence or Loewe additivity nor uses Chou's unified general theory. An n-dimensional logistic PDE decribing the Hill-type response of n-component mixtures is solved. Appropriate boundary conditions ensure the correct asymptotic behaviour. Mathematica 11 (Wolfram, Mathematica Version 11.0, 2016) is used for the mathematics and graphics presented in this article. The Hill response surface ansatz can be applied to mixtures of compounds with arbitrary Hill parameters. Restrictions which are required when deriving analytical expressions for response surfaces from other principles, are unnecessary. Many approaches based on Loewe additivity turn out be special cases of the Hill approach whose increased flexibility permits a better description of 'null-effect' responses. Missing sham-compliance of Bliss IA, known as Colby's model in agrochemistry, leads to incompatibility with the Hill surface ansatz. Examples of binary and ternary mixtures illustrate the differences between the approaches. For Hill-slopes close to one and doses below the half-maximum effect doses MSM (Colby, Bliss, Finney, Abbott) predicts synergistic effects where the Hill model indicates 'null

Diversity and biogeography of land snails (Mollusca, Gastropoda) in the limestone hills of Perak, Peninsular Malaysia

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Foon, Junn Kitt; Clements, Gopalasamy Reuben; Liew, Thor-Seng

2017-01-01

Abstract Limestone hills are now gaining global conservation attention as hotspots for short-range endemic species. Levels of land snail endemism can be high at limestone hills, especially at hill clusters that are geographically isolated. In the State of Perak, Peninsular Malaysia, limestone hills have been opportunistically surveyed for land snails in the past, but the majority have yet to be surveyed. To address this knowledge gap, we systematically surveyed the terrestrial malacofauna of 12 limestone hills that, based on our opinion, are a representation of the limestone land snail assemblages within the State. Our inventory yielded high sampling completeness (>85%). We found 122 species of land snails, of which 34 species were unique to one of the surveyed hills. We identified 30 species that are potentially new to science. The number of land snail species recorded at each hill ranged between 39 and 63 species. Four of the sampled limestone hills namely, Prk 01 G. Tempurung, Prk 55 G. Pondok, Prk 47 Kanthan, and Prk 64 Bt Kepala Gajah, have high levels of species richness and unique species, representing 91% of the total species recorded in this study. We identified two clusters of limestone hills in central Perak with distinct differences in land snail species composition – a northern hill cluster on elevated granite bedrock and southern hill cluster in a low-lying valley surrounded by alluvial soils. As limestone hills continue to be quarried to meet the cement demand, the four identified limestone hills, along with other hills from the two clusters, warrant urgent conservation attention in order to maintain high species diversity within Perak’s terrestrial malacofauna. PMID:28769723

Cluster analysis on a sphere: Application to magnetizations from metasediments of the Jack Hills, Western Australia

Science.gov (United States)

Bono, Richard K.; Tarduno, John A.; Dare, Matthew S.; Mitra, Gautam; Cottrell, Rory D.

2018-02-01

Metasediments of the Jack Hills contain the oldest known terrestrial minerals in the form of zircons nearly 4.4 billion years old. Paleointensity data from these zircons provide evidence for a Hadean geodynamo as old as 4.2 billion years old. Given the importance of these zircons for constraining the earliest history of the core, it is vital to understand the fidelity of the zircon record. A fundamental aspect providing context for the preservation of primary magnetic signals is the nature of overprints predicted to have been imparted on rocks of the Jack Hills due to Archean to Proterozoic metamorphic events. To be viable magnetic records of a Hadean geodynamo, zircon magnetization directions should differ from these secondary magnetizations. To evaluate these secondary magnetizations, we report paleomagnetic analyses of a comprehensive sampling of 68 quartzite cobble-sized clasts from the Jack Hills metasediments ∼0.5 to 1.0 km from the Discovery Site (which has yielded the oldest zircons and paleofield estimates). While application of standard paleomagnetic tests suggests that the ensemble of cobble directions cannot be distinguished from those drawn from a random distribution, a new cluster analysis of directions on a sphere and non-parametric resampling approaches reveal significant directions amongst subsets of the data. One, isolated at the lowest temperature analyzed [200 to 300 °C, Declination (Dec.) = 316.8°, Inclination (Inc.) = - 51.1 °] appears to be dominated by the present day field. Another, isolated at higher (but still relatively low unblocking temperatures that we call "intermediate", of ∼350-500 °C, Dec. = 243.8°, Inc. = 9.5°) agrees with a magnetic overprint isolated from the secondary Cr-Fe mica fuchsite isolated from the Jack Hills Discovery site, passing a field test at the 80% confidence level. No evidence is found in our data, or in the data of others collected on similar Jack Hills lithologies, for a widespread 1 Ga

The basic science and mathematics of random mutation and natural selection.

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Kleinman, Alan

2014-12-20

The mutation and natural selection phenomenon can and often does cause the failure of antimicrobial, herbicidal, pesticide and cancer treatments selection pressures. This phenomenon operates in a mathematically predictable behavior, which when understood leads to approaches to reduce and prevent the failure of the use of these selection pressures. The mathematical behavior of mutation and selection is derived using the principles given by probability theory. The derivation of the equations describing the mutation and selection phenomenon is carried out in the context of an empirical example. Copyright © 2014 John Wiley & Sons, Ltd.

Fertility in Hill Korwas -- a primitive tribe of Madhya Pradesh.

Science.gov (United States)

Pandey, G D; Tiwary, R S

1996-12-01

This study examines fertility behavior among 604 eligible couples in Hill Korwa tribes in Madhya Pradesh state, India. Low fertility patterns are compared to those of neighboring Gonds and nontribals from rural Jabalpur. The Hill Korwa are a subtribe of the Korwa, who remained in the hills and dense forests. Over 60% live in three tehsils of Surguja district, including Ambikapur tehsil where the study was conducted. Data were obtained in March 1991. Eligible couples were those where both partners live together and the noncontracepting wife is under age 50 and nonmenopausal. Only 3% were literate. Female marriage age was about 15 years. The median age was 23.8 years. 92% lived below the poverty line. The average number of children ever born (CEB) per couple was 1.9, compared to 2.5 for the Gond and 2.9 for nontribal couples. The CEB in a reproductive lifetime was 2.9, compared to 5.3 for Gond women and 5.9 for nontribal women. Fecundity among Hill Korwa women was 66% lower at younger ages (16-17 years and 17-18 years), and the differences increased with an increase in age at marriage. Hill Korwas had a low female age at marriage, low literacy, low percentages engaged in agriculture, and higher percentages living above the poverty line.

Midwest nukes tumble, rock industry: Byron, Marble Hill, Zimmer

International Nuclear Information System (INIS)

Nogee, A.

1984-01-01

The nuclear industry is suffering from a lack of investor confidence because of cancelled projects and the unprecedented rejection of an operating license for Commonwealth Edison's Byron plant on grounds that the utility failed to meet quality assurance responsibilities. When plans to complete the Zimmer and Marble Hill nuclear plants were abandoned, Bechtel came forward with a financing plan that, while rejected for Zimmer and Marble Hill, could lead to future bailouts. Both Zimmer and Marble Hill plants could be partially converted to coal. The loss of investor confidence in nuclear plants is largely due to political pressures brought on by a combination of citizen intervenors, whistle blowers on construction sites and disagreements between participating utilities. A rise in stock prices followed the cancellation announcements and the lowered investment security ratings

Compensatory mutations cause excess of antagonistic epistasis in RNA secondary structure folding

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Adami Christoph

2003-02-01

Full Text Available Background The rate at which fitness declines as an organism's genome accumulates random mutations is an important variable in several evolutionary theories. At an intuitive level, it might seem natural that random mutations should tend to interact synergistically, such that the rate of mean fitness decline accelerates as the number of random mutations is increased. However, in a number of recent studies, a prevalence of antagonistic epistasis (the tendency of multiple mutations to have a mitigating rather than reinforcing effect has been observed. Results We studied in silico the net amount and form of epistatic interactions in RNA secondary structure folding by measuring the fraction of neutral mutants as a function of mutational distance d. We found a clear prevalence of antagonistic epistasis in RNA secondary structure folding. By relating the fraction of neutral mutants at distance d to the average neutrality at distance d, we showed that this prevalence derives from the existence of many compensatory mutations at larger mutational distances. Conclusions Our findings imply that the average direction of epistasis in simple fitness landscapes is directly related to the density with which fitness peaks are distributed in these landscapes.

Compensatory mutations cause excess of antagonistic epistasis in RNA secondary structure folding.

Science.gov (United States)

Wilke, Claus O; Lenski, Richard E; Adami, Christoph

2003-02-05

The rate at which fitness declines as an organism's genome accumulates random mutations is an important variable in several evolutionary theories. At an intuitive level, it might seem natural that random mutations should tend to interact synergistically, such that the rate of mean fitness decline accelerates as the number of random mutations is increased. However, in a number of recent studies, a prevalence of antagonistic epistasis (the tendency of multiple mutations to have a mitigating rather than reinforcing effect) has been observed. We studied in silico the net amount and form of epistatic interactions in RNA secondary structure folding by measuring the fraction of neutral mutants as a function of mutational distance d. We found a clear prevalence of antagonistic epistasis in RNA secondary structure folding. By relating the fraction of neutral mutants at distance d to the average neutrality at distance d, we showed that this prevalence derives from the existence of many compensatory mutations at larger mutational distances. Our findings imply that the average direction of epistasis in simple fitness landscapes is directly related to the density with which fitness peaks are distributed in these landscapes.

Microhabitats of Merriam's turkeys in the Black Hills, South Dakota

Science.gov (United States)

Mark A. Rumble; Stanley H. Anderson

1996-01-01

Merriam’s Turkeys (Meleagris gallopavo merriami) are associated with ponderosa pine (Pinus ponderosa) forests in the western United States, but are not native to the ponderosa pine forest of the Black Hills, South Dakota. The Black Hills population was established by transplanting birds from New Mexico and Colorado between 1948 and...

State of conservation of Santa Martha's hills, Colombia

International Nuclear Information System (INIS)

Lopez Salgado, Hector Jaime; Carbono Delahoz, Eduino

2006-01-01

The urban growth of Santa Marta and the occupation without planning of their surrounding hills, affect their natural conditions. The hills are part of the scenic beauty of the city and its conservation is indispensable to maintain the standard of life in her the vegetal cover corresponds to forests and scrubs of isomegathermic floor with xeromorphic characters, due to the low pluvial precipitation, this landscape characterizes the Colombian Caribbean coast in a narrow strip that extends from the south of the Guajira to the gulf of Morrosquillo. At the present time, only they are left surpluses in natural state, due to the floristic simplification of the vegetation, the introduction of invading species and modification of the landscape. The responsibility of the suitable handling of the urban space is imperative for the official, private sector and citizen institutions. The objective is to make an evaluation of the environmental conditions of hills of the city, in order to obtain basic elements, for the design of appropriate strategies of handling and its conservation. By means of the use of the GIS, with verification and aerial photo interpretation of field a multi-temporary study (1955-1993-2003) of the vegetal cover of the hills was elaborated that allowed to establish the happened changes. The execution of inventors allowed knowing the wealth and the structure floristic the vegetal cover of the area. The work was executed between May of the 2004 and May of the 2005

Mass, charge, and energy separation by selective acceleration with a traveling potential hill

Science.gov (United States)

Tung, L. Schwager; Barr, W. L.; Lowder, R. S.; Post, R. F.

1996-10-01

A traveling electric potential hill has been used to generate an ion beam with an energy distribution that is mass dependent from a monoenergetic ion beam of mixed masses. This effect can be utilized as a novel method for mass separation applied to identification or enrichment of ions (e.g., of elements, isotopes, or molecules). This theory for mass-selective acceleration is presented here and is shown to be confirmed by experiment and by a time-dependent particle-in-cell computer simulation. Results show that monoenergetic ions with the particular mass of choice are accelerated by controlling the hill potential and the hill velocity. The hill velocity is typically 20%-30% faster than the ions to be accelerated. The ability of the hill to pickup a particular mass uses the fact that small kinetic energy differences in the lab frame appear much larger in the moving hill frame. Ions will gain energy from the approaching hill if their relative energy in the moving hill frame is less than the peak potential of the hill. The final energy of these accelerated ions can be several times the source energy, which facilitates energy filtering for mass purification or identification. If the hill potential is chosen to accelerate multiple masses, the heaviest mass will have the greatest final energy. Hence, choosing the appropriate hill potential and collector retarding voltage will isolate ions with the lightest, heaviest, or intermediate mass. In the experimental device, called a Solitron, purified 20Ne and 22Ne are extracted from a ribbon beam of neon that is originally composed of 20Ne:22Ne in the natural ratio of 91:9. The isotopic content of the processed beam is determined by measuring the energy distribution of the detected current. These results agree with the theory. In addition to mass selectivity, our theory can also be applied to the filtration of an ion beam according to charge state or energy. Because of this variety of properties, the Solitron is envisioned to

Random Evolutionary Dynamics Driven by Fitness and House-of-Cards Mutations: Sampling Formulae

Science.gov (United States)

Huillet, Thierry E.

2017-07-01

We first revisit the multi-allelic mutation-fitness balance problem, especially when mutations obey a house of cards condition, where the discrete-time deterministic evolutionary dynamics of the allelic frequencies derives from a Shahshahani potential. We then consider multi-allelic Wright-Fisher stochastic models whose deviation to neutrality is from the Shahshahani mutation/selection potential. We next focus on the weak selection, weak mutation cases and, making use of a Gamma calculus, we compute the normalizing partition functions of the invariant probability densities appearing in their Wright-Fisher diffusive approximations. Using these results, generalized Ewens sampling formulae (ESF) from the equilibrium distributions are derived. We start treating the ESF in the mixed mutation/selection potential case and then we restrict ourselves to the ESF in the simpler house-of-cards mutations only situation. We also address some issues concerning sampling problems from infinitely-many alleles weak limits.

Archeological Investigations at Big Hill Lake, Southeastern Kansas, 1980.

Science.gov (United States)

1982-09-01

settled primarily along the Neosho river and Labette, Big Hill, and Pumpkin creeks. One of the first settlers in Osage township, in which Big Hill...slabs is not known at present. About 10 years later, in 1876, materials were reported- ly collected from an aboriginal site along Pumpkin creek...and length- ening its lifetime of use. As would therefore be expected, cracks are present between each of the paired holes on both of the two restored

Measurements of the near-surface flow over a hill

Science.gov (United States)

Vosper, S. B.; Mobbs, S. D.; Gardiner, B. A.

2002-10-01

The near-surface flow over a hill with moderate slope and height comparable with the boundary-layer depth is investigated through field measurements of the mean flow (at 2 m), surface pressure, and turbulent momentum flux divergence between 8 and 15 m. The measurements were made along an east-west transect across the hill Tighvein (height 458 m, approximate width 8 km) on the Isle of Arran, south-west Scotland, during two separate periods, each of around three-weeks duration. Radiosonde ascents are used to determine the variation of a Froude number, FL = U/NL, where U is the wind speed at the middle-layer height, hm, N is the mean Brunt-Väisälä frequency below this height and L is a hill length-scale. Measurements show that for moderately stratified flows (for which FL 0.25) a minimum in the hill-induced surface-pressure perturbation occurs across the summit and this is accompanied by a maximum in the near-surface wind speed. In the more strongly stratified case (FL 0.25) the pressure field is more asymmetric and the lee-slope flow is generally stronger than on the windward slope. Such a flow pattern is qualitatively consistent with that predicted by stratified linear boundary-layer and gravity-wave theories. The near-surface momentum budget is analysed by evaluating the dominant terms in a Bernoulli equation suitable for turbulent flow. Measurements during periods of westerly flow are used to evaluate the dominant terms, and the equation is shown to hold to a reasonable approximation on the upwind slope of the hill and also on the downwind slope, away from the summit. Immediately downwind of the summit, however, the Bernoulli equation does not hold. Possible reasons for this, such as non-separated sheltering and flow separation, are discussed.

Novedades sobre el género Pilosella Hill.: (Asteraceae, Lactuceae) en España, II

OpenAIRE

Mateo Sanz, Gonzalo

2016-01-01

Se comunica la presencia de diversas especies nuevas del género Pilosella Hill. (Asteraceae, Lactuceae) en España. Novelties on the genus Pilosella Hill (Asteraceae, Lactuceae) in Spain, II. Several species of Pilosella Hill (Asteraceae, Lactuceae) found in Spain.

George William Hill, the Great but Unknown 19th Century Celestial Mechanician

Science.gov (United States)

Corbin, Brenda G.

2012-01-01

George William Hill (1838-1914) has long been considered one of the most famous and talented celestial mechanicians of the past century and a half. However, many people have never heard of him and his work. Simon Newcomb said he "will easily rank as the greatest master of mathematical astronomy during the last quarter of the nineteenth century.” After receiving a B.A. at Rutgers in 1859, Hill began work in 1861 at the office of the American Ephemeris and Nautical Almanac in Cambridge, MA. He moved to Washington with the group in 1882 which then became part of the U. S. Naval Observatory. Newcomb, beginning his work on planetary motion, assigned the theory of Jupiter and Saturn to him, calling it about the most difficult topic. Hill's work was published by the USNO in 1890 as A New Theory of Jupiter and Saturn. From 1898 to 1901, Hill lectured on the subject of celestial mechanics at Columbia University in a position created just for him. After 1892 and until his death, he lived at the family homestead in West Nyack, NY. He never married, was something of a recluse, and spent most of his time with his books and research. Hill was an amateur botanist and enjoyed exploring on long walks in the countryside. Many honors and awards came to him during his lifetime, both from the U.S. and abroad, including serving as president of the American Mathematical Society. All of Hill's mathematical and astronomical research was incorporated in The Collected Mathematical Works of George William Hill. This work, containing a preface in French by Poincare, was published in 4 large volumes by the Carnegie Institution of Washington in 1905.

Multi-scale habitat use of male ruffed grouse in the Black Hills National Forest

Science.gov (United States)

Cassandra L. Mehls; Kent C. Jensen; Mark A. Rumble; Michael C. Wimberly

2014-01-01

Ruffed grouse (Bonasa umbellus) are native upland game birds and a management indicator species (MIS) for aspen (Populus tremuloides) in the Black Hills National Forest (Black Hills). Our objective was to assess resource selection of male ruffed grouse to identify the most appropriate scale to manage for aspen and ruffed grouse in the Black Hills. During spring 2007...

Numerical Simulation Analysis of Seismic of Frame Structure on Hill Terrain

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Weng Weisu

2017-01-01

Full Text Available In recent year, Wenchuan,Ya’an,Yushu and other areas in china occur a series of high earthquake, however areas of earthquake is similar as mountainous terrain, building structure of seismic increasingly aroused our concern, and the research that hill topography affected building structure seismic in shallow mountain. The research content mainly includes: through modelling was built by the ANSYS software, the cooperative effects of a ten layer of frame structure- hill system were calculation. First, simple comparative dynamic characteristics analysis of soil - structure interaction and the rigid foundation assumption conditions; Second, put Hill-Soil-Structure Interaction(referred to as HSSI and Soil - Structure - Interaction(referred to as SSI further analysis of the dynamic response, including: including structural modal analysis (vibration mode, cycle, the time history analysis (such as displacement, internal force and acceleration and so on. Through Hill-Soil-Structure Interaction research, taking each factor in consideration, giving structure seismic key technology measures about shallow mountain to provide reference for such structure theory research.

DOE to accept bids for Elk Hills crude

International Nuclear Information System (INIS)

Anon.

1992-01-01

This paper reports that the Department of Energy will accept bids in a reoffering sale covering 53,400 b/d of Elk Hills field oil but later may exercise an option to cut sales volumes and ship 20,000 b/d to Strategic Petroleum Reserve sites in Texas. DOE rejected all 19 bids submitted in an earlier semiannual sale of crude oil from the California naval petroleum reserve, saying they were too low. DOE the, The unique combination of federal and state government policies affecting the movement of oil into and out of the California market has contributed to a situation in which it apparently is very difficult for the government to receive a price for Elk Hills oil that satisfies the minimum price tests that govern the sale of Elk Hills oil. The 12 winning bids in the reoffering sale averaged $13.58/bbl, with bids for the higher quality Stevens zone crude averaging $13.92/bbl, about 67 cents/bbl higher than bids rejected last month. DOE the 20,000 b/d is all local pipelines can ship to the interstate All-American pipeline for transfer to Texas beginning in June

Rare Plants and Animals of the Texas Hill Country: Educator's Guide.

Science.gov (United States)

Texas State Dept. of Parks and Wildlife, Austin.

Texas Hill Country is a land of fresh water springs, stony hills, and steep canyons and home to many rare plants and animals. Six activities for grades 3-5 and six activities for grades 6-12 are contained in this guide. Elementary activity highlights include using "The Lorax" by Dr. Seuss to stimulate critical thinking about…

Conditioning exercises in ski jumping: biomechanical relationship of squat jumps, imitation jumps, and hill jumps.

Science.gov (United States)

Lorenzetti, Silvio; Ammann, Fabian; Windmüller, Sabrina; Häberle, Ramona; Müller, Sören; Gross, Micah; Plüss, Michael; Plüss, Stefan; Schödler, Berni; Hübner, Klaus

2017-11-22

As hill jumps are very time-consuming, ski jumping athletes often perform various imitation jumps during training. The performed jumps should be similar to hill jumps, but a direct comparison of the kinetic and kinematic parameters has not been performed yet. Therefore, this study aimed to correlate 11 common parameters during hill jumps (Oberstdorf Germany), squat jumps (wearing indoor shoes), and various imitation jumps (rolling 4°, rolling flat, static; jumping equipment or indoor shoes) on a custom-built instrumented vehicle with a catch by the coach. During the performed jumps, force and video data of the take-off of 10 athletes were measured. The imitation and squat jumps were then ranked. The main difference between the hill jumps and the imitation and squat jumps is the higher maximal force loading rate during the hill jumps. Imitation jumps performed on a rolling platform, on flat ground were the most similar to hill jumps in terms of the force-time, and leg joint kinematic properties. Thus, non-hill jumps with a technical focus should be performed from a rolling platform with a flat inrun with normal indoor shoes or jumping equipment, and high normal force loading rates should be the main focus of imitation training.

Comparison of Speed-Up Over Hills Derived from Wind-Tunnel Experiments, Wind-Loading Standards, and Numerical Modelling

Science.gov (United States)

Safaei Pirooz, Amir A.; Flay, Richard G. J.

2018-03-01

We evaluate the accuracy of the speed-up provided in several wind-loading standards by comparison with wind-tunnel measurements and numerical predictions, which are carried out at a nominal scale of 1:500 and full-scale, respectively. Airflow over two- and three-dimensional bell-shaped hills is numerically modelled using the Reynolds-averaged Navier-Stokes method with a pressure-driven atmospheric boundary layer and three different turbulence models. Investigated in detail are the effects of grid size on the speed-up and flow separation, as well as the resulting uncertainties in the numerical simulations. Good agreement is obtained between the numerical prediction of speed-up, as well as the wake region size and location, with that according to large-eddy simulations and the wind-tunnel results. The numerical results demonstrate the ability to predict the airflow over a hill with good accuracy with considerably less computational time than for large-eddy simulation. Numerical simulations for a three-dimensional hill show that the speed-up and the wake region decrease significantly when compared with the flow over two-dimensional hills due to the secondary flow around three-dimensional hills. Different hill slopes and shapes are simulated numerically to investigate the effect of hill profile on the speed-up. In comparison with more peaked hill crests, flat-topped hills have a lower speed-up at the crest up to heights of about half the hill height, for which none of the standards gives entirely satisfactory values of speed-up. Overall, the latest versions of the National Building Code of Canada and the Australian and New Zealand Standard give the best predictions of wind speed over isolated hills.

Distance-Based Functional Diversity Measures and Their Decomposition: A Framework Based on Hill Numbers

Science.gov (United States)

Chiu, Chun-Huo; Chao, Anne

2014-01-01

Hill numbers (or the “effective number of species”) are increasingly used to characterize species diversity of an assemblage. This work extends Hill numbers to incorporate species pairwise functional distances calculated from species traits. We derive a parametric class of functional Hill numbers, which quantify “the effective number of equally abundant and (functionally) equally distinct species” in an assemblage. We also propose a class of mean functional diversity (per species), which quantifies the effective sum of functional distances between a fixed species to all other species. The product of the functional Hill number and the mean functional diversity thus quantifies the (total) functional diversity, i.e., the effective total distance between species of the assemblage. The three measures (functional Hill numbers, mean functional diversity and total functional diversity) quantify different aspects of species trait space, and all are based on species abundance and species pairwise functional distances. When all species are equally distinct, our functional Hill numbers reduce to ordinary Hill numbers. When species abundances are not considered or species are equally abundant, our total functional diversity reduces to the sum of all pairwise distances between species of an assemblage. The functional Hill numbers and the mean functional diversity both satisfy a replication principle, implying the total functional diversity satisfies a quadratic replication principle. When there are multiple assemblages defined by the investigator, each of the three measures of the pooled assemblage (gamma) can be multiplicatively decomposed into alpha and beta components, and the two components are independent. The resulting beta component measures pure functional differentiation among assemblages and can be further transformed to obtain several classes of normalized functional similarity (or differentiation) measures, including N-assemblage functional generalizations of

Distance-based functional diversity measures and their decomposition: a framework based on Hill numbers.

Directory of Open Access Journals (Sweden)

Chun-Huo Chiu

Full Text Available Hill numbers (or the "effective number of species" are increasingly used to characterize species diversity of an assemblage. This work extends Hill numbers to incorporate species pairwise functional distances calculated from species traits. We derive a parametric class of functional Hill numbers, which quantify "the effective number of equally abundant and (functionally equally distinct species" in an assemblage. We also propose a class of mean functional diversity (per species, which quantifies the effective sum of functional distances between a fixed species to all other species. The product of the functional Hill number and the mean functional diversity thus quantifies the (total functional diversity, i.e., the effective total distance between species of the assemblage. The three measures (functional Hill numbers, mean functional diversity and total functional diversity quantify different aspects of species trait space, and all are based on species abundance and species pairwise functional distances. When all species are equally distinct, our functional Hill numbers reduce to ordinary Hill numbers. When species abundances are not considered or species are equally abundant, our total functional diversity reduces to the sum of all pairwise distances between species of an assemblage. The functional Hill numbers and the mean functional diversity both satisfy a replication principle, implying the total functional diversity satisfies a quadratic replication principle. When there are multiple assemblages defined by the investigator, each of the three measures of the pooled assemblage (gamma can be multiplicatively decomposed into alpha and beta components, and the two components are independent. The resulting beta component measures pure functional differentiation among assemblages and can be further transformed to obtain several classes of normalized functional similarity (or differentiation measures, including N-assemblage functional

The Hill's three-body problem: a new deduction of motion equations

International Nuclear Information System (INIS)

Fuente Marcos, C. de la.

1995-01-01

Although the Hill's problem has been considered traditionally as a particular case of the restricted problem, it is not but rather a different problem with the same degree of generality. In this paper it is presented a new derivation of the motion equations obtained originally by Hill in 1878 as well as a brief discussion about its possible applications. (Author) 13 refs

Effects of mineralogy on sorption of strontium and cesium onto Calico Hills Tuff

International Nuclear Information System (INIS)

Meyer, R.E.; Arnold, W.D.; Case, F.I.; O'Kelley, G.D.; Land, J.F.

1990-04-01

The sorption properties of tuff formations at the proposed site for the high-level nuclear waste repository at Yucca Mountain, Nevada, have been extensively studied. Sorption and desorption measurements were made of strontium and cesium onto clinoptilolite and Calico Hills Tuff. The object was to see whether there was a correlation between sorption of strontium and cesium onto Calico Hills Tuff and the sorption of strontium and cesium onto clinoptilolite based on the content of clinoptilolite in the Calico Hills Tuff. 13 refs., 10 figs., 6 tabs

Analysis of automobile’s automatic control systems for the hill climbing start

Directory of Open Access Journals (Sweden)

Valeriy I. Klimenko

2014-12-01

Full Text Available To improve road safety while driving on the rise, facilitating the driver’s activity the automobile industry leaders are introducing automatic hill-hold control systems into the car design. This study purpose relates to the existing automatic start control systems’ design analysis. Analyzed are the existing design developments of automatic hill start assist control systems applied for driving at the start of the climbing. The effected research allows to select the scheme for further development of start driving automatic control systems. Further improvement of driving control systems and primarily the driver assistance hill-hold control systems is necessary to increase both the driving comfort and the traffic safety.

The Kapsiki of the Mandara Hills

NARCIS (Netherlands)

Beek, van W.E.A.

1987-01-01

The Kapsiki of Cameroon and the Higi of Nigeria are two tribes from the Mandara hills area of central and western Africa. Though they form one coherent group of villages, they are usually considered as two separate ethnic units. The author normally uses the term Kapsiki for both. Based on fieldwork

77 FR 2128 - Southwest Pennsylvania Railroad Company-Acquisition Exemption-Laurel Hill Development Corporation

Science.gov (United States)

2012-01-13

... DEPARTMENT OF TRANSPORTATION Surface Transportation Board [Docket No. FD 35584] Southwest Pennsylvania Railroad Company--Acquisition Exemption-- Laurel Hill Development Corporation Southwest... 49 CFR 1150.41 to acquire a number of rail lines now owned by Laurel Hill Development Corporation...

Investigation of periodic systems by means of the generalized Hill method

International Nuclear Information System (INIS)

Baitin, A.V.; Ivanov, A.A.

1994-01-01

We propose the new method of investigation of infinite periodic determination which is a generalized Hill method. This method has been used for finding of the characteristic value for the Hill equation. finding the band structure of the one-dimensional periodic and obtaining of the dispersion equation for the electromagnetic wave propagation in the waveguide by plasma arbitrary periodic density modulation by plasma arbitrary periodic density modulation

77 FR 33560 - Southwest Pennsylvania Railroad Company-Acquisition Exemption-Laurel Hill Development Corporation

Science.gov (United States)

2012-06-06

... Pennsylvania Railroad Company--Acquisition Exemption-- Laurel Hill Development Corporation Southwest... 49 CFR 1150.41 to acquire a 0.66-mile line of railroad owned by Laurel Hill Development Corporation... rail line. Most recently, in Southwest Pennsylvania Railroad Company--Acquisition Exemption--Laurel...

Evidence to the Marley Hill Public Inquiry

Energy Technology Data Exchange (ETDEWEB)

Wilson, G.K. (Council for the Protection of Rural England (UK). Durham and Teesdale Branch)

1989-11-01

George Kenneth Wilson, a retired power station enginer, and holder of such offices as Vice-Chairman of the CPRE Durham and Teesdale Branch, Secretary of the Derwent Valley Protection Society and an officer of the Opencast Mining Intelligence Group, presents reasons for dismissing the appeal for opencast mining at the Marley Hill site in the NE of England saying that the Mineral Planning Guidance Note, MPG3 seemed to be repeating mistakes inherent in the previous 'Plan for coal'. He considers that the application cannot be justified on the grounds of demand or forecast market trends. The type of coal is unsuitable for local power station boilers. The working of the site would destroy a large area of pleasant countryside. The standard of restoration of the 32 sites surrounding Marley Hill is in his opinion very poor.

Hill functions for stochastic gene regulatory networks from master equations with split nodes and time-scale separation

Science.gov (United States)

Lipan, Ovidiu; Ferwerda, Cameron

2018-02-01

The deterministic Hill function depends only on the average values of molecule numbers. To account for the fluctuations in the molecule numbers, the argument of the Hill function needs to contain the means, the standard deviations, and the correlations. Here we present a method that allows for stochastic Hill functions to be constructed from the dynamical evolution of stochastic biocircuits with specific topologies. These stochastic Hill functions are presented in a closed analytical form so that they can be easily incorporated in models for large genetic regulatory networks. Using a repressive biocircuit as an example, we show by Monte Carlo simulations that the traditional deterministic Hill function inaccurately predicts time of repression by an order of two magnitudes. However, the stochastic Hill function was able to capture the fluctuations and thus accurately predicted the time of repression.

Penerapan Metode Hill Climbing Pada Sistem Informasi Geografis Untuk Mencari Lintasan Terpendek

Directory of Open Access Journals (Sweden)

Eka Vickraien Dangkua

2016-04-01

Full Text Available Heuristic search methods is one of the methods commonly in use in finding the shortest path, one of which, namely the methods Hill Climbing process where testing is done using heuristic functions. Problems generally encountered is the shortest path search to solve the problem of distance can be changed into a graph structure, where the point of declaring the city and the State line that connects the two cities. From the logic so that it can locate destinations and save on travel costs. The hallmarks of this algorithm are all possible solutions will have then checked one by one from the left side, so it will be obtained solutions with optimal results. On a Hill Climbing method according to case using geographic information systems as a tool in making a decision, by way of collect, examine, and analyze information related to digital map. with a combination of Hill Climbing method and geographic information systems can result in an application that is certainly feasible for use in the search path problems.   Keywords: Hill Climbin method; digital map; Geographic Information Systems

Mutation rules and the evolution of sparseness and modularity in biological systems.

Directory of Open Access Journals (Sweden)

Tamar Friedlander

Full Text Available Biological systems exhibit two structural features on many levels of organization: sparseness, in which only a small fraction of possible interactions between components actually occur; and modularity--the near decomposability of the system into modules with distinct functionality. Recent work suggests that modularity can evolve in a variety of circumstances, including goals that vary in time such that they share the same subgoals (modularly varying goals, or when connections are costly. Here, we studied the origin of modularity and sparseness focusing on the nature of the mutation process, rather than on connection cost or variations in the goal. We use simulations of evolution with different mutation rules. We found that commonly used sum-rule mutations, in which interactions are mutated by adding random numbers, do not lead to modularity or sparseness except for in special situations. In contrast, product-rule mutations in which interactions are mutated by multiplying by random numbers--a better model for the effects of biological mutations--led to sparseness naturally. When the goals of evolution are modular, in the sense that specific groups of inputs affect specific groups of outputs, product-rule mutations also lead to modular structure; sum-rule mutations do not. Product-rule mutations generate sparseness and modularity because they tend to reduce interactions, and to keep small interaction terms small.

Water quality impacts from mining in the Black Hills, South Dakota, USA

International Nuclear Information System (INIS)

Rahn, P.H.; Davis, A.D.; Webb, C.J.; Nichols, A.D.

1996-01-01

The focus of this research was to determine if abandoned mines constitute a major environmental hazard in the Black Hills. Many abandoned gold mines in the Black Hills contribute acid and heavy metals to streams. In some areas of sulfide mineralization local impacts are severe, but in most areas the impacts are small because most ore deposits consist of small quartz veins with few sulfides. Pegmatite mines appear to have negligible effects on water due to the insoluble nature of pegmatite minerals. Uranium mines in the southern Black Hills contribute some radioactivity to surface water, but he impact is limited because of the dry climate and lack of runoff in that area. 26 refs

Sharing the Gift of Jazz: An Interview with Willie L. Hill Jr.

Science.gov (United States)

Howe, Brad

2011-01-01

This article presents an interview with Willie L. Hill Jr., founder and director of the Society for Jazz Education. Currently a professor of music education at the University of Massachusetts-Amherst and the director of the UMass Fine Arts Center, Hill has served as director of education for the Thelonious Monk Institute of Jazz. He is a past…

First-line icotinib versus cisplatin/pemetrexed plus pemetrexed maintenance therapy for patients with advanced EGFR mutation-positive lung adenocarcinoma (CONVINCE): a phase 3, open-label, randomized study.

Science.gov (United States)

Shi, Y K; Wang, L; Han, B H; Li, W; Yu, P; Liu, Y P; Ding, C M; Song, X; Ma, Z Y; Ren, X L; Feng, J F; Zhang, H L; Chen, G Y; Han, X H; Wu, N; Yao, C; Song, Y; Zhang, S C; Song, W; Liu, X Q; Zhao, S J; Lin, Y C; Ye, X Q; Li, K; Shu, Y Q; Ding, L M; Tan, F L; Sun, Y

2017-10-01

Icotinib has been previously shown to be non-inferior to gefitinib in non-selected advanced non-small-cell lung cancer patients when given as second- or further-line treatment. In this open-label, randomized, phase 3 CONVINCE trial, we assessed the efficacy and safety of first-line icotinib versus cisplatin/pemetrexed plus pemetrexed maintenance in lung adenocarcinoma patients with epidermal growth factor receptor (EGFR) mutation. Eligible participants were adults with stage IIIB/IV lung adenocarcinoma and exon 19/21 EGFR mutations. Participants were randomly allocated (1 : 1) to receive oral icotinib or 3-week cycle of cisplatin plus pemetrexed for up to four cycles; non-progressive patients after four cycles were maintained with pemetrexed until disease progression or intolerable toxicity. The primary end point was progression-free survival (PFS) assessed by independent response evaluation committee. Other end points included overall survival (OS) and safety. Between January 2013 and August 2014, 296 patients were randomized, and 285 patients were treated (148 to icotinib, 137 to chemotherapy). Independent response evaluation committee-assessed PFS was significantly longer in the icotinib group (11.2 versus 7.9 months; hazard ratio, 0.61, 95% confidence interval 0.43-0.87; P = 0.006). No significant difference for OS was observed between treatments in the overall population or in EGFR-mutated subgroups (exon 19 Del/21 L858R). The most common grade 3 or 4 adverse events (AEs) in the icotinib group were rash (14.8%) and diarrhea (7.4%), compared with nausea (45.9%), vomiting (29.2%), and neutropenia (10.9%) in the chemotherapy group. AEs (79.1% versus 94.2%; P icotinib group than in the chemotherapy group. First-line icotinib significantly improves PFS of advanced lung adenocarcinoma patients with EGFR mutation with a tolerable and manageable safety profile. Icotinib should be considered as a first-line treatment for this patient population. © The Author

Mammals of Kalimpong Hills, Darjeeling District, West Bengal, India

Directory of Open Access Journals (Sweden)

J.K. Mallick

2012-10-01

Full Text Available Neora Valley National Park (NVNP in the Kalimpong Hills, Darjeeling District, having a wide range of altitudinal variations (183-3,200 m and climatic conditions and forming an ecological trijunction with Sikkim and Bhutan, is the last virgin wilderness in West Bengal. It is a global hotspot for the unique ecosystem, where tropical, sub-tropical, temperate and sub-temperate forests represent a wealth of biodiversity including many threatened and rare mammals. It is the prime habitat of Ailurus fulgens (estimated population 28-32, Neofelis nebulosa (population unassessed, Ursus thibetanus (18, Bos gaurus (81, Hemitragus jemlahicus (32, Naemorhedus goral (73, Capricornis sumatraensis (89, Rusa unicolor (286, Muntiacus vaginalis (590 and Sus scrofa (615. Discovery of Panthera tigris (20 in 1998 prompted the forest department to include NVNP as a sensitive wildlife zone. Many authors recorded the mammalian diversity in Darjeeling District since the mid-nineteenth century, but most of them referred to the Darjeeling Hills. The documentations on Kalimpong Hills are scarce because of the dense canopy, thick undergrowth and inaccessible terrain, particularly in the pristine forests of Neora Valley. Consequently, a comprehensive compendium of the mammals in this region was not prepared. A study was undertaken in 2008-2009 with a view to bridging this knowledge-gap and presenting an updated account of the mammalian species in this new short-listed World Heritage Site and surrounding forests of the Kalimpong Hills based on literature review, questionnaire survey, direct sighting and indirect evidences. During June-October 1916, N.A. Baptista recorded 29 mammalian species (22 genera out of 563 specimens collected, from the region. The present study registered 99 species (68 genera after 94 years.

Micro-topography showing the landslide-origin of the Marumori hill, Matsukawa geothermal field Iwate Prefecture, Japan

Energy Technology Data Exchange (ETDEWEB)

Hashimoto, Tomomasa; Ikeda, Kazuo; Sumi, Seiai

1988-07-27

The Marumori Hill in the Matsukawa geothermal field has been previously considered to be a central cone or a lava dome in a caldera. Airphotogeological study, topographical surveying, and trenching are carried out in order to clarify the origin of the hill. Fifty six topographic linearments trending NE-SW direction distributed parallelly were detected on the top area and the northern flank of the hill. This linearment swarm is composed of the alternated small ranges and valleys with asymmetric profiles similar to cuesta topography. These topographic features are considered to be formed under the tensional stress field trending NW-SE direction on the surface of a landslide block. The hill is inferred to be not a lava dome but a landslide block which slide down from the steep scarp north and west of the hill. The age of the landslide is dated back to be older than 2400 years B.P. according to 14C age of the humic strata covering the hill. (7 figs, 1 tab, 14 refs)

"Beverly Hills 90210" : kes mida teeb / Tiina Lepiste

Index Scriptorium Estoniae

Lepiste, Tiina

2003-01-01

Aaron Spellingu produtseeritud ja 2000. aastal lõpetatud menuseriaalis "Beverly Hills 90210" osalenud näitlejate edaspidisest elust seoses plaaniga teha täispikk mängufilm "10 Year High School Reunion"

Somatic mitochondrial DNA mutations in cancer escape purifying selection and high pathogenicity mutations lead to the oncocytic phenotype: pathogenicity analysis of reported somatic mtDNA mutations in tumors

International Nuclear Information System (INIS)

Pereira, Luísa; Soares, Pedro; Máximo, Valdemar; Samuels, David C

2012-01-01

The presence of somatic mitochondrial DNA (mtDNA) mutations in cancer cells has been interpreted in controversial ways, ranging from random neutral accumulation of mutations, to positive selection for high pathogenicity, or conversely to purifying selection against high pathogenicity variants as occurs at the population level. Here we evaluated the predicted pathogenicity of somatic mtDNA mutations described in cancer and compare these to the distribution of variations observed in the global human population and all possible protein variations that could occur in human mtDNA. We focus on oncocytic tumors, which are clearly associated with mitochondrial dysfunction. The protein variant pathogenicity was predicted using two computational methods, MutPred and SNPs&GO. The pathogenicity score of the somatic mtDNA variants were significantly higher in oncocytic tumors compared to non-oncocytic tumors. Variations in subunits of Complex I of the electron transfer chain were significantly more common in tumors with the oncocytic phenotype, while variations in Complex V subunits were significantly more common in non-oncocytic tumors. Our results show that the somatic mtDNA mutations reported over all tumors are indistinguishable from a random selection from the set of all possible amino acid variations, and have therefore escaped the effects of purifying selection that act strongly at the population level. We show that the pathogenicity of somatic mtDNA mutations is a determining factor for the oncocytic phenotype. The opposite associations of the Complex I and Complex V variants with the oncocytic and non-oncocytic tumors implies that low mitochondrial membrane potential may play an important role in determining the oncocytic phenotype

Review of Barrow Hill: Curse of the Ancient Circle PC Game

OpenAIRE

Michael Charno

2007-01-01

Archaeological video games are few and far between. Internet Archaeology has reviewed a number of archaeologically-based computer applications, but none that in my opinion would fall under the video game category. Barrow Hill: Curse of the ancient circle from Shadow Tor Studios, is a video game…with archaeology in it. It would be a stretch to claim that Barrow Hill is actually an archaeological video game, but it does have an occasionally solid archaeological foundation and back story.

Disabilities caused by unstable mutations in Costa Rica

OpenAIRE

Morales Montero, Fernando; Cuenca Berger, Patricia; Castro Volio, Isabel

2004-01-01

Myotonic dystrophy and fragile X syndrome are two genetically determined relatively common disabilities. Both are examples of a new type of mutation mechanism called unstable or dynamic mutations, triple repeats expansions or DNA amplification. Fragile X syndrome is recognized as the main cause of hereditary mental retardation and myotonic dystrophy is considered the most common muscular dystrophy of adults. This is a prospective non randomized study of clinically affected people,...

Mitochondrial DNA mutations in mutator mice confer respiration defects and B-cell lymphoma development.

Directory of Open Access Journals (Sweden)

Takayuki Mito

Full Text Available Mitochondrial DNA (mtDNA mutator mice are proposed to express premature aging phenotypes including kyphosis and hair loss (alopecia due to their carrying a nuclear-encoded mtDNA polymerase with a defective proofreading function, which causes accelerated accumulation of random mutations in mtDNA, resulting in expression of respiration defects. On the contrary, transmitochondrial mito-miceΔ carrying mtDNA with a large-scale deletion mutation (ΔmtDNA also express respiration defects, but not express premature aging phenotypes. Here, we resolved this discrepancy by generating mtDNA mutator mice sharing the same C57BL/6J (B6J nuclear background with that of mito-miceΔ. Expression patterns of premature aging phenotypes are very close, when we compared between homozygous mtDNA mutator mice carrying a B6J nuclear background and selected mito-miceΔ only carrying predominant amounts of ΔmtDNA, in their expression of significant respiration defects, kyphosis, and a short lifespan, but not the alopecia. Therefore, the apparent discrepancy in the presence and absence of premature aging phenotypes in mtDNA mutator mice and mito-miceΔ, respectively, is partly the result of differences in the nuclear background of mtDNA mutator mice and of the broad range of ΔmtDNA proportions of mito-miceΔ used in previous studies. We also provided direct evidence that mtDNA abnormalities in homozygous mtDNA mutator mice are responsible for respiration defects by demonstrating the co-transfer of mtDNA and respiration defects from mtDNA mutator mice into mtDNA-less (ρ(0 mouse cells. Moreover, heterozygous mtDNA mutator mice had a normal lifespan, but frequently developed B-cell lymphoma, suggesting that the mtDNA abnormalities in heterozygous mutator mice are not sufficient to induce a short lifespan and aging phenotypes, but are able to contribute to the B-cell lymphoma development during their prolonged lifespan.

Structure and evolution of the Horse Heaven Hills in South-Central Washington

International Nuclear Information System (INIS)

Hagood, M.C.

1986-03-01

The purpose of this study is to describe the structure and evolution of the Horse Heaven Hills uplift at its abrupt structural transition. This was achieved by: (1) delineating the structure within the two trends as they approach the intersection; (2) determining the timing and location of uplift within each trend; (3) comparing and contrasting Miocene vertical growth rates along folds within both trends; and (4) imposing constraints for tectonic models that pertain to the genesis of the Horse Heaven Hills uplift. These objectives can only be fulfilled if the stratigraphy of the area is first delineated. Data from this study suggest that tectonic models that directly or indirectly pertain to the origin of the Horse Heaven Hills uplift may be constrained by: (1) the predominance of monoclinal or near-monoclinal fold geometries and reverse faults along both the northwest and northeast trends; (2) preliminary data which suggest clockwise rotation has occurred along folds of both trends; (3) folds along both trends developing simultaneously and at similar rates (at least during Wanapum and Saddle Mountains time); (4) folds along the northwest trend of the Horse Heaven Hills uplift being genetically related to and forming simultaneously with at least certain folds along the Rattlesnake-Wallula structural alignment; (5) the uplift developing simultaneously with the north-northwest-trending Hog Ranch-Naneum Ridge anticline as well as other Yakima folds during at least Columbia River Basalt Group time. It is proposed that folds of both trends of the Horse Heaven Hills uplift were generated by the same tectonic processes

Public Computer Usage in Chapel Hill Public Library

Data.gov (United States)

Town of Chapel Hill, North Carolina — Data collected November 2014 - May 2016. As of June 2016, this data is no longer collected on a continual basis.This dataset includes frequency and length of use of...

Review of Barrow Hill: Curse of the Ancient Circle PC Game

Directory of Open Access Journals (Sweden)

Michael Charno

2007-01-01

Full Text Available Archaeological video games are few and far between. Internet Archaeology has reviewed a number of archaeologically-based computer applications, but none that in my opinion would fall under the video game category. Barrow Hill: Curse of the ancient circle from Shadow Tor Studios, is a video game…with archaeology in it. It would be a stretch to claim that Barrow Hill is actually an archaeological video game, but it does have an occasionally solid archaeological foundation and back story.

2013 strategic petroleum reserve big hill well integrity grading report.

Energy Technology Data Exchange (ETDEWEB)

Lord, David L.; Roberts, Barry L.; Lord, Anna C. Snider; Bettin, Giorgia; Sobolik, Steven Ronald; Park, Byoung Yoon; Rudeen, David Keith; Eldredge, Lisa; Wynn, Karen; Checkai, Dean; Perry, James Thomas

2014-02-01

This report summarizes the work performed in developing a framework for the prioritization of cavern access wells for remediation and monitoring at the Big Hill Strategic Petroleum Reserve site. This framework was then applied to all 28 wells at the Big Hill site with each well receiving a grade for remediation and monitoring. Numerous factors affecting well integrity were incorporated into the grading framework including casing survey results, cavern pressure history, results from geomechanical simulations, and site geologic factors. The framework was developed in a way as to be applicable to all four of the Strategic Petroleum Reserve sites.

Solar heating and hot water system installed at Cherry Hill, New Jersey

Science.gov (United States)

1979-01-01

The solar heating and hot water system installed in existing buildings at the Cherry Hill Inn in Cherry Hill, New Jersey is described in detail. The system is expected to furnish 31.5% of the overall heating load and 29.8% of the hot water load. The collectors are liquid evacuated tube type. The storage system is an above ground insulated steel water tank with a capacity of 7,500 gallons.

Long-term changes in explosive and effusive behaviour at andesitic arc volcanoes: Chronostratigraphy of the Centre Hills Volcano, Montserrat

Science.gov (United States)

Coussens, Maya; Cassidy, Michael; Watt, Sebastian F. L.; Jutzeler, Martin; Talling, Peter J.; Barfod, Dan; Gernon, Thomas M.; Taylor, Rex; Hatter, Stuart J.; Palmer, Martin R.; Montserrat Volcano Observatory

2017-03-01

Volcanism on Montserrat (Lesser Antilles arc) has migrated southwards since the formation of the Silver Hills 2.5 Ma, and has formed three successively active volcanic centres. The Centre Hills volcano was the focus of volcanism from 1-0.4 Ma, before activity commenced at the currently active Soufrière Hills volcano. The history of activity at these two volcanoes provides an opportunity to investigate the pattern of volcano behaviour on an andesitic arc island over the lifetime of individual volcanoes. Here, we describe the pyroclastic stratigraphy of subaerial exposures around central Montserrat; identifying 11 thick (> 1 m) pumiceous units derived from sustained explosive eruptions of Centre Hills from 0.8-0.4 Ma. Over 10 other, less well- exposed pumiceous units have also been identified. The pumice-rich units are interbedded with andesite lava breccias derived from effusive, dome-forming eruptions of Centre Hills. The stratigraphy indicates that large (up to magnitude 5) explosive eruptions occurred throughout the history of Centre Hills, alongside effusive activity. This behaviour at Centre Hills contrasts with Soufrière Hills, where deposits from sustained explosive eruptions are much less common and restricted to early stages of activity at the volcano, from 175-130 ka. Subsequent eruptions at Soufriere Hills have been dominated by andesitic effusive eruptions. The bulk composition, petrography and mineral chemistry of volcanic rocks from Centre Hills and Soufrière Hills are similar throughout the history of both volcanoes, except for occasional, transient departures to different magma compositions, which mark shifts in vent location or dominant eruption style. For example, the final recorded eruption of Centre Hills, before the initiation of activity at Soufrière Hills, was more silicic than any other identified eruption on Montserrat; and the basaltic South Soufrière Hills episode marked the transition to the current stage of predominantly effusive

Properties of a genetic algorithm extended by a random self-learning operator and asymmetric mutations: A convergence study for a task of powder-pattern indexing

International Nuclear Information System (INIS)

Paszkowicz, Wojciech

2006-01-01

Genetic algorithms represent a powerful global-optimisation tool applicable in solving tasks of high complexity in science, technology, medicine, communication, etc. The usual genetic-algorithm calculation scheme is extended here by introduction of a quadratic self-learning operator, which performs a partial local search for randomly selected representatives of the population. This operator is aimed as a minor deterministic contribution to the (stochastic) genetic search. The population representing the trial solutions is split into two equal subpopulations allowed to exhibit different mutation rates (so called asymmetric mutation). The convergence is studied in detail exploiting a crystallographic-test example of indexing of powder diffraction data of orthorhombic lithium copper oxide, varying such parameters as mutation rates and the learning rate. It is shown through the averaged (over the subpopulation) fitness behaviour, how the genetic diversity in the population depends on the mutation rate of the given subpopulation. Conditions and algorithm parameter values favourable for convergence in the framework of proposed approach are discussed using the results for the mentioned example. Further data are studied with a somewhat modified algorithm using periodically varying mutation rates and a problem-specific operator. The chance of finding the global optimum and the convergence speed are observed to be strongly influenced by the effective mutation level and on the self-learning level. The optimal values of these two parameters are about 6 and 5%, respectively. The periodic changes of mutation rate are found to improve the explorative abilities of the algorithm. The results of the study confirm that the applied methodology leads to improvement of the classical genetic algorithm and, therefore, it is expected to be helpful in constructing of algorithms permitting to solve similar tasks of higher complexity

Gender, professionalization, and the child in the Progressive Era: Patty Smith Hill, 1868-1946.

Science.gov (United States)

Allen, Ann Taylor

2011-01-01

This article discusses the career of Patty Smith Hill, a major figure in the American kindergarten movement, in the context of the Progressive Era in American history. Hill, an educator and child-welfare activist, became known both as a reformer of early-childhood education and as an advocate of the inclusion of the kindergarten, originally a private institution, in public-school systems. The article acknowledges this as one of the most significant achievements of the woman-led reform movements of the Progressive Era, but at the same time notes that it involved a substantial transfer of power from the women who had originally developed the kindergarten to the male principals and superintendants who now supervised kindergarten teachers, often without much understanding of their distinctive methods and aims. As a professor at Columbia Teachers College, Hill also exercised an international influence. Hill's career exemplifies broader patterns of women's professionalization during the late-nineteenth and early-twentieth centuries.

Outcomes of arthroscopic "Remplissage": capsulotenodesis of the engaging large Hill-Sachs lesion

Directory of Open Access Journals (Sweden)

Mayo Lee

2011-06-01

Full Text Available Abstract Background A Hill-Sachs lesion of the humeral head after a shoulder dislocation is clinically insignificant in most cases. However, a sizable defect will engage with the anterior rim of the glenoid and cause instability even after anterior glenoid reconstruction. The purpose of this study was to evaluate the outcome of arthroscopic capsulotenodesis of the posterior capsule and infraspinatus tendon ("remplissage" to seal a large engaging Hill-Sachs lesion in an unstable shoulder. Methods This was a prospective follow-up study of patients who underwent arthroscopic surgery for recurrent shoulder instability with a large engaging Hill-Sachs lesion from 2007 to 2009. The clinical results were measured preoperatively and postoperatively with the Simple Shoulder test (SST and the Rowe score for instability. Results Eleven patients met the inclusion criteria of this study. The mean follow-up time was 30 months (range 24 to 35 months. At the last follow-up, significant improvement was observed in both scores with no recurrent dislocations. The mean SST improved from 6.6 to 11 (p Conclusions Arthroscopic remplissage for shoulder instability is an effective soft tissue technique to seal a large engaging Hill-Sachs lesion with respect to recurrence rate, range of motion and shoulder function.

Topographical Hill Shading Map Production Based Tianditu (map World)

Science.gov (United States)

Wang, C.; Zha, Z.; Tang, D.; Yang, J.

2018-04-01

TIANDITU (Map World) is the public version of National Platform for Common Geospatial Information Service, and the terrain service is an important channel for users on the platform. With the development of TIANDITU, topographical hill shading map production for providing and updating global terrain map on line becomes necessary for the characters of strong intuition, three-dimensional sense and aesthetic effect. As such, the terrain service of TIANDITU focuses on displaying the different scales of topographical data globally. And this paper mainly aims to research the method of topographical hill shading map production globally using DEM (Digital Elevation Model) data between the displaying scales about 1 : 140,000,000 to 1 : 4,000,000, corresponded the display level from 2 to 7 on TIANDITU website.

Soils of wet valleys in the Larsemann Hills and Vestfold Hills oases (Princess Elizabeth Land, East Antarctica)

Science.gov (United States)

Mergelov, N. S.

2014-09-01

The properties and spatial distribution of soils and soil-like bodies in valleys of the coastal Larsemann Hills and Vestfold Hills oases—poorly investigated in terms of the soil areas of East Antarctica—are discussed. In contrast to Dry Valleys—large continental oases of Western Antarctica—the studied territory is characterized by the presence of temporarily waterlogged sites in the valleys. It is argued that the deficit of water rather than the low temperature is the major limiting factor for the development of living organisms and the pedogenesis on loose substrates. The moisture gradients in the surface soil horizons explain the spatial distribution of the different soils and biotic complexes within the studied valleys. Despite the permanent water-logging of the deep suprapermafrost horizons of most of the soils in the valleys, no gley features have been identified in them. The soils of the wet valleys in the Larsemann Hills oasis do not contain carbonates. They have a slightly acid or neutral reaction. The organic carbon and nitrogen contents are mainly controlled by the amount of living and dead biomass rather than by the humic substances proper. The larger part of the biomass is concentrated inside the mineral soil matrix rather than on the soil surface. The stresses caused by surface drying, strong winds, and ultraviolet radiation prevent the development of organisms on the surface of the soil and necessitate the search for shelter within the soil fine earth material (endoedaphic niche) or under the gravelly pavement (hypolithic niche). In the absence of higher plants, humified products of their decomposition, and rainwater that can wash the soil profile and upon the low content of silt and clay particles in the soil material, "classical" soil horizons are not developed. The most distinct (and, often, the only diagnosed) products of pedogenesis in these soils are represented by organomineral films on the surface of mineral particles.

Genetic Correlations Greatly Increase Mutational Robustness and Can Both Reduce and Enhance Evolvability.

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Sam F Greenbury

2016-03-01

Full Text Available Mutational neighbourhoods in genotype-phenotype (GP maps are widely believed to be more likely to share characteristics than expected from random chance. Such genetic correlations should strongly influence evolutionary dynamics. We explore and quantify these intuitions by comparing three GP maps-a model for RNA secondary structure, the HP model for protein tertiary structure, and the Polyomino model for protein quaternary structure-to a simple random null model that maintains the number of genotypes mapping to each phenotype, but assigns genotypes randomly. The mutational neighbourhood of a genotype in these GP maps is much more likely to contain genotypes mapping to the same phenotype than in the random null model. Such neutral correlations can be quantified by the robustness to mutations, which can be many orders of magnitude larger than that of the null model, and crucially, above the critical threshold for the formation of large neutral networks of mutationally connected genotypes which enhance the capacity for the exploration of phenotypic novelty. Thus neutral correlations increase evolvability. We also study non-neutral correlations: Compared to the null model, i If a particular (non-neutral phenotype is found once in the 1-mutation neighbourhood of a genotype, then the chance of finding that phenotype multiple times in this neighbourhood is larger than expected; ii If two genotypes are connected by a single neutral mutation, then their respective non-neutral 1-mutation neighbourhoods are more likely to be similar; iii If a genotype maps to a folding or self-assembling phenotype, then its non-neutral neighbours are less likely to be a potentially deleterious non-folding or non-assembling phenotype. Non-neutral correlations of type i and ii reduce the rate at which new phenotypes can be found by neutral exploration, and so may diminish evolvability, while non-neutral correlations of type iii may instead facilitate evolutionary exploration

Genetic Correlations Greatly Increase Mutational Robustness and Can Both Reduce and Enhance Evolvability

Science.gov (United States)

Greenbury, Sam F.; Schaper, Steffen; Ahnert, Sebastian E.; Louis, Ard A.

2016-01-01

Mutational neighbourhoods in genotype-phenotype (GP) maps are widely believed to be more likely to share characteristics than expected from random chance. Such genetic correlations should strongly influence evolutionary dynamics. We explore and quantify these intuitions by comparing three GP maps—a model for RNA secondary structure, the HP model for protein tertiary structure, and the Polyomino model for protein quaternary structure—to a simple random null model that maintains the number of genotypes mapping to each phenotype, but assigns genotypes randomly. The mutational neighbourhood of a genotype in these GP maps is much more likely to contain genotypes mapping to the same phenotype than in the random null model. Such neutral correlations can be quantified by the robustness to mutations, which can be many orders of magnitude larger than that of the null model, and crucially, above the critical threshold for the formation of large neutral networks of mutationally connected genotypes which enhance the capacity for the exploration of phenotypic novelty. Thus neutral correlations increase evolvability. We also study non-neutral correlations: Compared to the null model, i) If a particular (non-neutral) phenotype is found once in the 1-mutation neighbourhood of a genotype, then the chance of finding that phenotype multiple times in this neighbourhood is larger than expected; ii) If two genotypes are connected by a single neutral mutation, then their respective non-neutral 1-mutation neighbourhoods are more likely to be similar; iii) If a genotype maps to a folding or self-assembling phenotype, then its non-neutral neighbours are less likely to be a potentially deleterious non-folding or non-assembling phenotype. Non-neutral correlations of type i) and ii) reduce the rate at which new phenotypes can be found by neutral exploration, and so may diminish evolvability, while non-neutral correlations of type iii) may instead facilitate evolutionary exploration and so

Statistical theory of neutral protein evolution by random site mutations

Indian Academy of Sciences (India)

Administrator

Understanding the features of the protein conformational space represents a key component to characterize ... Neutral evolution; protein design; mutations; foldability criteria. 1. Introduction ... analysis of the vast evolutionary landscape is re- ... intra-molecular interactions in the protein which may not be ... This is the main in-.

Three-dimensional computed tomography measurement accuracy of varying Hill-Sachs lesion size.

Science.gov (United States)

Ho, Anthony; Kurdziel, Michael D; Koueiter, Denise M; Wiater, J Michael

2018-02-01

The glenoid track concept has been proposed to correlate shoulder stability with bone loss. Accurate assessment of Hill-Sachs lesion size preoperatively may affect surgical planning and postoperative outcomes; however, no measurement method has been universally accepted. This study aimed to assess the accuracy and reliability of measuring Hill-Sachs lesion sizes using 3-dimensional (3D) computed tomography (CT). Nine polyurethane humerus bone substitutes were used to create Hill-Sachs lesions of varying sizes with a combination of lesion depth (shallow, intermediate, and deep) and width (small, medium, and large). Specimens were scanned with a clinical CT scanner for size measurements and a micro-CT scanner for measurement of true lesion size. Six evaluators repeated measurements twice in a 2-week interval. Scans were measured by use of 3D CT reconstructions for length, width, and Hill-Sachs interval and with use of 2D CT for depth. The interclass correlation coefficient evaluated interobserver and intraobserver variability and percentage error, and Student t-tests assessed measurement accuracy. Interclass correlation coefficient reliability demonstrated strong agreement for all variables measured (0.856-0.975). Percentage error between measured length and measured depth and the true measurement significantly varied with respect to both lesion depth (P = .003 and P = .005, respectively) and lesion size (P = .049 and P = .004, respectively). The 3D CT imaging is effective and reproducible in determining lesion size. Determination of Hill-Sachs interval width is also reliable when it is applied to the glenoid track concept. Measured values on 3D and 2-dimensional imaging using a conventional CT scanner may slightly underestimate true measurements. Copyright © 2017 Journal of Shoulder and Elbow Surgery Board of Trustees. Published by Elsevier Inc. All rights reserved.

Assessment of Groundwater Resources in Kirana Hills Region, Rabwah, District Chiniot, Pakistan

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Mirza Naseer Ahmad

2016-12-01

Full Text Available This study was planned to assess the groundwater quality of the area adjacent to Precambrian Kirana Hills, Pakistan. The majority of the people in the area use groundwater from private wells for drinking and domestic use. Therefore, it is important to provide an overview of the groundwater quality. This information would be beneficial to local people and the administration for selecting suitable water treatment methods. Samples were collected from different wells of Rabwah town, close to the Kirana Hills. Parameters like EC, pH, alkalinity and total dissolved solids (TDS were determined for 142 samples. While 40 samples were analyzed for hardness, Ca, Mg, Cl, SO4, NO3, and F. standards set by the World Health Organization (WHO were considered to evaluate the quality of groundwater. Geographic Information System (GIS was used to interpolate analyzed physicochemical parameters. The results showed that EC, TDS, hardness, Cl, SO4, and Ca were very high in the water samples of the area. Fifty-two percent of samples had pH values lower than the permissible limits. Results suggest that the water quality is extremely adverse close to the hills. The poor water quality in the area near the hills may be due to the limited recharge of aquifers because of the hills and shallow basement, which may act as a barrier to subsurface water movement. Some physical and chemical parameters indicated that the quality of water at deeper levels (i.e. >150 ft is relatively better. This may be due to limited exploitation of water from deeper aquifers as compared to shallow aquifers. Hence, proper aquifer management is required to prevent water quality deterioration due to over exploiataion. NO3 was found within the acceptable limits and all water samples were found free of any significant contamination by human activities.

78 FR 21098 - Black Hills National Forest Advisory Board

Science.gov (United States)

2013-04-09

... Hills National Forest Advisory Board (Board) will meet in Rapid City South Dakota. The Board is... staff before the meeting. The agenda will include time for people to make oral statements of three...

Clonal mutations in primary human glial tumors: evidence in support of the mutator hypothesis

International Nuclear Information System (INIS)

Misra, Anjan; Chattopadhyay, Parthaprasad; Chosdol, Kunzang; Sarkar, Chitra; Mahapatra, Ashok K; Sinha, Subrata

2007-01-01

A verifiable consequence of the mutator hypothesis is that even low grade neoplasms would accumulate a large number of mutations that do not influence the tumor phenotype (clonal mutations). In this study, we have attempted to quantify the number of clonal mutations in primary human gliomas of astrocytic cell origin. These alterations were identified in tumor tissue, microscopically confirmed to have over 70% neoplastic cells. Random Amplified Polymorphic DNA (RAPD) analysis was performed using a set of fifteen 10-mer primers of arbitrary but definite sequences in 17 WHO grade II astrocytomas (low grade diffuse astrocytoma or DA) and 16 WHO grade IV astrocytomas (Glioblastoma Multiforme or GBM). The RAPD profile of the tumor tissue was compared with that of the leucocyte DNA of the same patient and alteration(s) scored. A quantitative estimate of the overall genomic changes in these tumors was obtained by 2 different modes of calculation. The overall change in the tumors was estimated to be 4.24% in DA and 2.29% in GBM by one method and 11.96% and 6.03% in DA and GBM respectively by the other. The difference between high and lower grade tumors was statistically significant by both methods. This study demonstrates the presence of extensive clonal mutations in gliomas, more in lower grade. This is consistent with our earlier work demonstrating that technique like RAPD analysis, unbiased for locus, is able to demonstrate more intra-tumor genetic heterogeneity in lower grade gliomas compared to higher grade. The results support the mutator hypothesis proposed by Loeb

Stormwater Management Plan for the Arden Hills Army Training Site, Arden Hills, Minnesota

Energy Technology Data Exchange (ETDEWEB)

Carr, Adrianne E. [Argonne National Lab. (ANL), Argonne, IL (United States); Wuthrich, Kelsey K. [Argonne National Lab. (ANL), Argonne, IL (United States); Ziech, Angela M. [Argonne National Lab. (ANL), Argonne, IL (United States); Bowen, Esther E. [Argonne National Lab. (ANL), Argonne, IL (United States); Quinn, John [Argonne National Lab. (ANL), Argonne, IL (United States)

2013-03-01

This stormwater management plan focuses on the cantonment and training areas of the Arden Hills Army Training Site (AHATS). The plan relates the site stormwater to the regulatory framework, and it summarizes best management practices to aide site managers in promoting clean site runoff. It includes documentation for a newly developed, detailed model of stormwater flow retention for the entire AHATS property and adjacent upgradient areas. The model relies on established modeling codes integrated in a U.S. Department of Defense-sponsored software tool, the Watershed Modeling System (WMS), and it can be updated with data on changes in land use or with monitoring data.

Mutation screening of the HGD gene identifies a novel alkaptonuria mutation with significant founder effect and high prevalence.

Science.gov (United States)

Sakthivel, Srinivasan; Zatkova, Andrea; Nemethova, Martina; Surovy, Milan; Kadasi, Ludevit; Saravanan, Madurai P

2014-05-01

Alkaptonuria (AKU) is an autosomal recessive disorder; caused by the mutations in the homogentisate 1, 2-dioxygenase (HGD) gene located on Chromosome 3q13.33. AKU is a rare disorder with an incidence of 1: 250,000 to 1: 1,000,000, but Slovakia and the Dominican Republic have a relatively higher incidence of 1: 19,000. Our study focused on studying the frequency of AKU and identification of HGD gene mutations in nomads. HGD gene sequencing was used to identify the mutations in alkaptonurics. For the past four years, from subjects suspected to be clinically affected, we found 16 positive cases among a randomly selected cohort of 41 Indian nomads (Narikuravar) settled in the specific area of Tamil Nadu, India. HGD gene mutation analysis showed that 11 of these patients carry the same homozygous splicing mutation c.87 + 1G > A; in five cases, this mutation was found to be heterozygous, while the second AKU-causing mutation was not identified in these patients. This result indicates that the founder effect and high degree of consanguineous marriages have contributed to AKU among nomads. Eleven positive samples were homozygous for a novel mutation c.87 + 1G > A, that abolishes an intron 2 donor splice site and most likely causes skipping of exon 2. The prevalence of AKU observed earlier seems to be highly increased in people of nomadic origin. © 2014 John Wiley & Sons Ltd/University College London.

New type of hill-top inflation

Energy Technology Data Exchange (ETDEWEB)

Barvinsky, A.O.; Nesterov, D.V. [Theory Department, Lebedev Physics Institute, Leninsky Prospect 53, Moscow 119991 (Russian Federation); Kamenshchik, A.Yu., E-mail: barvin@td.lpi.ru, E-mail: Alexander.Kamenshchik@bo.infn.it, E-mail: nesterov@td.lpi.ru [Dipartimento di Fisica and INFN, via Irnerio 46, 40126 Bologna (Italy)

2016-01-01

We suggest a new type of hill-top inflation originating from the initial conditions in the form of the microcanonical density matrix for the cosmological model with a large number of quantum fields conformally coupled to gravity. Initial conditions for inflation are set up by cosmological instantons describing underbarrier oscillations in the vicinity of the inflaton potential maximum. These periodic oscillations of the inflaton field and cosmological scale factor are obtained within the approximation of two coupled oscillators subject to the slow roll regime in the Euclidean time. This regime is characterized by rapid oscillations of the scale factor on the background of a slowly varying inflaton, which guarantees smallness of slow roll parameters ε and η of the following inflation stage. A hill-like shape of the inflaton potential is shown to be generated by logarithmic loop corrections to the tree-level asymptotically shift-invariant potential in the non-minimal Higgs inflation model and R{sup 2}-gravity. The solution to the problem of hierarchy between the Planckian scale and the inflation scale is discussed within the concept of conformal higher spin fields, which also suggests the mechanism bringing the model below the gravitational cutoff and, thus, protecting it from large graviton loop corrections.

New type of hill-top inflation

Energy Technology Data Exchange (ETDEWEB)

Barvinsky, A.O. [Theory Department, Lebedev Physics Institute,Leninsky Prospect 53, Moscow 119991 (Russian Federation); Department of Physics, Tomsk State University,Lenin Ave. 36, Tomsk 634050 (Russian Federation); Department of Physics and Astronomy, Pacific Institue for Theoretical Physics,University of British Columbia, 6224 Agricultural Road, Vancouver, BC V6T 1Z1 (Canada); Kamenshchik, A.Yu. [Dipartimento di Fisica and INFN,via Irnerio 46, 40126 Bologna (Italy); L.D. Landau Institute for Theoretical Physcis,Kosygin str. 2, 119334 Moscow (Russian Federation); Nesterov, D.V. [Theory Department, Lebedev Physics Institute,Leninsky Prospect 53, Moscow 119991 (Russian Federation)

2016-01-20

We suggest a new type of hill-top inflation originating from the initial conditions in the form of the microcanonical density matrix for the cosmological model with a large number of quantum fields conformally coupled to gravity. Initial conditions for inflation are set up by cosmological instantons describing underbarrier oscillations in the vicinity of the inflaton potential maximum. These periodic oscillations of the inflaton field and cosmological scale factor are obtained within the approximation of two coupled oscillators subject to the slow roll regime in the Euclidean time. This regime is characterized by rapid oscillations of the scale factor on the background of a slowly varying inflaton, which guarantees smallness of slow roll parameters ϵ and η of the following inflation stage. A hill-like shape of the inflaton potential is shown to be generated by logarithmic loop corrections to the tree-level asymptotically shift-invariant potential in the non-minimal Higgs inflation model and R{sup 2}-gravity. The solution to the problem of hierarchy between the Planckian scale and the inflation scale is discussed within the concept of conformal higher spin fields, which also suggests the mechanism bringing the model below the gravitational cutoff and, thus, protecting it from large graviton loop corrections.

The hill forts and castle mounds in Lithuania: interaction between geodiversity and human-shaped landscape

Science.gov (United States)

Skridlaite, Grazina; Guobyte, Rimante; Satkunas, Jonas

2015-04-01

Lithuania is famous for its abundant, picturesque hill forts and castle mounds of natural origin. In Lithuania as well as in whole Europe the fortified hills were used as the society dwelling place since the beginning of the Late Bronze Age. Their importance increased when Livonian and Teutonic Orders directed a series of military campaigns against Lithuania with the aim of expansion of Christianity in the region at the end of 1st millennium AD, and they were intensively used till the beginning of the 15th c. when most of them were burned down during fights with the Orders or just abandoned due to the changing political and economical situation. What types of the geodiversity were used for fortified dwellings? The choice in a particular area depended on a variety of geomorphology left behind the retreating ice sheets. High spots dominating their surroundings were of prime interest. In E and SE Lithuania, the Baltic Upland hills marking the eastern margin of the last Weichselian glacier hosted numerous fortified settlements from the end of 2nd millennium BC to the Medieval Ages (Narkunai, Velikuskes etc). In W Lithuania, plateau-like hills of the insular Samogitian Upland had been repeatedly fortified from the beginning of 1st millennium AD to the 14th century (Satrija, Medvegalis etc). Chains of hill forts and castle mounds feature the slopes of glaciofluvial valleys of Nemunas, Neris and other rivers where the slopes were dissected by affluent rivulets and ravines and transformed into isolated, well protected hills (Kernave, Punia, Veliuona etc). Peninsulas and headlands formed by the erosion of fluvial and lacustrine deposits were used in the lowlands, e.g. in central and N Lithuania (Paberze, Mezotne etc). How much the landscape was modified for defense purposes? Long-term erosion and overgrowing vegetation damaged the former fortified sites, however some remains and the archeological excavations allowed their reconstruction. The fortified Bronze Age settlements

A power function profile of a ski jumping in-run hill.

Science.gov (United States)

Zanevskyy, Ihor

2011-01-01

The aim of the research was to find a function of the curvilinear segment profile which could make possible to avoid an instantaneous increasing of a curvature and to replace a circle arc segment on the in-run of a ski jump without any correction of the angles of inclination and the length of the straight-line segments. The methods of analytical geometry and trigonometry were used to calculate an optimal in-run hill profile. There were two fundamental conditions of the model: smooth borders between a curvilinear segment and straight-line segments of an in-run hill and concave of the curvilinear segment. Within the framework of this model, the problem has been solved with a reasonable precision. Four functions of a curvilinear segment profile of the in-run hill were investigated: circle arc, inclined quadratic parabola, inclined cubic parabola, and power function. The application of a power function to the in-run profile satisfies equal conditions for replacing a circle arc segment. Geometrical parameters of 38 modern ski jumps were investigated using the methods proposed.

A Constant Rate of Spontaneous Mutation in DNA-Based Microbes

Science.gov (United States)

Drake, John W.

1991-08-01

In terms of evolution and fitness, the most significant spontaneous mutation rate is likely to be that for the entire genome (or its nonfrivolous fraction). Information is now available to calculate this rate for several DNA-based haploid microbes, including bacteriophages with single- or double-stranded DNA, a bacterium, a yeast, and a filamentous fungus. Their genome sizes vary by ≈6500-fold. Their average mutation rates per base pair vary by ≈16,000-fold, whereas their mutation rates per genome vary by only ≈2.5-fold, apparently randomly, around a mean value of 0.0033 per DNA replication. The average mutation rate per base pair is inversely proportional to genome size. Therefore, a nearly invariant microbial mutation rate appears to have evolved. Because this rate is uniform in such diverse organisms, it is likely to be determined by deep general forces, perhaps by a balance between the usually deleterious effects of mutation and the physiological costs of further reducing mutation rates.

Minimization over randomly selected lines

Directory of Open Access Journals (Sweden)

Ismet Sahin

2013-07-01

Full Text Available This paper presents a population-based evolutionary optimization method for minimizing a given cost function. The mutation operator of this method selects randomly oriented lines in the cost function domain, constructs quadratic functions interpolating the cost function at three different points over each line, and uses extrema of the quadratics as mutated points. The crossover operator modifies each mutated point based on components of two points in population, instead of one point as is usually performed in other evolutionary algorithms. The stopping criterion of this method depends on the number of almost degenerate quadratics. We demonstrate that the proposed method with these mutation and crossover operations achieves faster and more robust convergence than the well-known Differential Evolution and Particle Swarm algorithms.

Hill climbing algorithms and trivium

DEFF Research Database (Denmark)

Borghoff, Julia; Knudsen, Lars Ramkilde; Matusiewicz, Krystian

2011-01-01

This paper proposes a new method to solve certain classes of systems of multivariate equations over the binary field and its cryptanalytical applications. We show how heuristic optimization methods such as hill climbing algorithms can be relevant to solving systems of multivariate equations....... A characteristic of equation systems that may be efficiently solvable by the means of such algorithms is provided. As an example, we investigate equation systems induced by the problem of recovering the internal state of the stream cipher Trivium. We propose an improved variant of the simulated annealing method...

Fuel management optimization in pressure water reactors with hexagonal geometry using hill climbing method

International Nuclear Information System (INIS)

Andres Diaz, J.; Quintero, Ruben; Melian, Manuel; Rosete, Alejandro

2000-01-01

In this work the general-purpose optimization method, Hill Climbing, was applied to the Fuel Management Optimization problem in PWR reactors, WWER type. They were carried out a series of experiments in order to study the performance of Hill Climbing. It was proven two starting point for initialize the search: a reload configuration by project and a reload configuration generated with the application of a minimal knowledge of the problem. It was also studied the effect of imposing constraints based on the physics of the reactor in order to reduce the number of possible solutions to be generated. The operator used in Hill Climbing was defined as a binary exchange of fuel assemblies. For the simulation of each generated configuration, the tridimensional simulator program SPPS-1 was used. It was formulated an objective function with power peaking constraint to guide the search. As results, a methodology ws proposed for the In-core Fuel Management Optimization in hexagonal geometry, and the feasibility of the application of the Hill Climbing to this type of problem was demonstrated. (author)

Whole genome sequencing of mutation accumulation lines reveals a low mutation rate in the social amoeba Dictyostelium discoideum.

Directory of Open Access Journals (Sweden)

Gerda Saxer

Full Text Available Spontaneous mutations play a central role in evolution. Despite their importance, mutation rates are some of the most elusive parameters to measure in evolutionary biology. The combination of mutation accumulation (MA experiments and whole-genome sequencing now makes it possible to estimate mutation rates by directly observing new mutations at the molecular level across the whole genome. We performed an MA experiment with the social amoeba Dictyostelium discoideum and sequenced the genomes of three randomly chosen lines using high-throughput sequencing to estimate the spontaneous mutation rate in this model organism. The mitochondrial mutation rate of 6.76×10(-9, with a Poisson confidence interval of 4.1×10(-9 - 9.5×10(-9, per nucleotide per generation is slightly lower than estimates for other taxa. The mutation rate estimate for the nuclear DNA of 2.9×10(-11, with a Poisson confidence interval ranging from 7.4×10(-13 to 1.6×10(-10, is the lowest reported for any eukaryote. These results are consistent with low microsatellite mutation rates previously observed in D. discoideum and low levels of genetic variation observed in wild D. discoideum populations. In addition, D. discoideum has been shown to be quite resistant to DNA damage, which suggests an efficient DNA-repair mechanism that could be an adaptation to life in soil and frequent exposure to intracellular and extracellular mutagenic compounds. The social aspect of the life cycle of D. discoideum and a large portion of the genome under relaxed selection during vegetative growth could also select for a low mutation rate. This hypothesis is supported by a significantly lower mutation rate per cell division in multicellular eukaryotes compared with unicellular eukaryotes.

Dental disease control in Pine Hill, New Mexico.

Science.gov (United States)

Carberry, Frank J; Cloud, Bill; Finster, Carolyn

2004-02-01

One-year results of a community-operated dental disease control project in Pine Hill, New Mexico. The program uses fluoride, chiefly rinse, and has not only reduced the amount of decay in permanent teeth, but has markedly reduced the need for restorative care of primary teeth.

Environmental protection and regulatory compliance at the Elk Hills field

International Nuclear Information System (INIS)

Chappelle, H.H.; Donahoe, R.L.; Kato, T.T.; Ordway, H.E.

1991-01-01

Environmental protection has played an integral role in the development and operation of the Elk Hills field since production at the maximum efficient rate was authorized in 1976. The field is located in a non-attainment area for California and National Ambient Air Quality Standards for two criteria pollutants and their associated precursors, is home to four endangered species, and operates within the California regulatory framework. Environmental protection and regulatory compliance is a multi-faceted program carried out through a substantial commitment of resources and workforce involvement. This paper describes the actions taken and resources employed to protect the environment, specific technologies and projects implemented, and the ongoing nature of these efforts at Elk Hills

One-Way Nested Large-Eddy Simulation over the Askervein Hill

Directory of Open Access Journals (Sweden)

James D. Doyle

2009-07-01

Full Text Available Large-eddy simulation (LES models have been used extensively to study atmospheric boundary layer turbulence over flat surfaces; however, LES applications over topography are less common. We evaluate the ability of an existing model – COAMPS^®-LES – to simulate flow over terrain using data from the Askervein Hill Project. A new approach is suggested for the treatment of the lateral boundaries using one-way grid nesting. LES wind profile and speed-up are compared with observations at various locations around the hill. The COAMPS-LES model performs generally well. This case could serve as a useful benchmark for evaluating LES models for applications over topography.

Stochastic modeling and simulation of reaction-diffusion system with Hill function dynamics.

Science.gov (United States)

Chen, Minghan; Li, Fei; Wang, Shuo; Cao, Young

2017-03-14

Stochastic simulation of reaction-diffusion systems presents great challenges for spatiotemporal biological modeling and simulation. One widely used framework for stochastic simulation of reaction-diffusion systems is reaction diffusion master equation (RDME). Previous studies have discovered that for the RDME, when discretization size approaches zero, reaction time for bimolecular reactions in high dimensional domains tends to infinity. In this paper, we demonstrate that in the 1D domain, highly nonlinear reaction dynamics given by Hill function may also have dramatic change when discretization size is smaller than a critical value. Moreover, we discuss methods to avoid this problem: smoothing over space, fixed length smoothing over space and a hybrid method. Our analysis reveals that the switch-like Hill dynamics reduces to a linear function of discretization size when the discretization size is small enough. The three proposed methods could correctly (under certain precision) simulate Hill function dynamics in the microscopic RDME system.

Molecular analysis demonstrates high prevalence of chloroquine resistance but no evidence of artemisinin resistance in Plasmodium falciparum in the Chittagong Hill Tracts of Bangladesh.

Science.gov (United States)

Alam, Mohammad Shafiul; Ley, Benedikt; Nima, Maisha Khair; Johora, Fatema Tuj; Hossain, Mohammad Enayet; Thriemer, Kamala; Auburn, Sarah; Marfurt, Jutta; Price, Ric N; Khan, Wasif A

2017-08-15

Artemisinin resistance is present in the Greater Mekong region and poses a significant threat for current anti-malarial treatment guidelines in Bangladesh. The aim of this molecular study was to assess the current status of drug resistance in the Chittagong Hill Tracts of Bangladesh near the Myanmar border. Samples were obtained from patients enrolled into a Clinical Trial (NCT02389374) conducted in Alikadam, Bandarban between August 2014 and January 2015. Plasmodium falciparum infections were confirmed by PCR and all P. falciparum positive isolates genotyped for the pfcrt K76T and pfmdr1 N86Y markers. The propeller region of the kelch 13 (k13) gene was sequenced from isolates from patients with delayed parasite clearance. In total, 130 P. falciparum isolates were available for analysis. The pfcrt mutation K76T, associated with chloroquine resistance was found in 81.5% (106/130) of cases and the pfmdr1 mutation N86Y in 13.9% (18/130) cases. No single nucleotide polymorphisms were observed in the k13 propeller region. This study provides molecular evidence for the ongoing presence of chloroquine resistant P. falciparum in Bangladesh, but no evidence of mutations in the k13 propeller domain associated with artemisinin resistance. Monitoring for artemisinin susceptibility in Bangladesh is needed to ensure early detection and containment emerging anti-malarial resistance.

Radiometric evidence of Middle Devonian inversion of the Hill End Trough, northeast Lachlan Fold Belt

International Nuclear Information System (INIS)

Pakham, G.H.

1999-01-01

The publication of a new geological time-scale by the Australian Geological Survey Organisation and radiometric dates from the Hill End goldfield have prompted the re-examination of the timing of deformation of the Hill End Trough to determine whether it occurred in Middle Devonian or Early Carboniferous time. Palaeontological evidence from the western trough margin and the Capertee High dates the end of deposition in the trough as late Emsian or early Eifelian (385-382 Ma). After a mid-Devonian hiatus of at least 15 million years, paralic sedimentation commenced on the Molong and Capertee Highs in late Frasnian or early Famennian time (367-363 Ma). No Upper Devonian sedimentary formations occur in the Hill End Trough. Structural relationships indicate that the oldest mineral veins at Hill End preceded cleavage formation in the deformed trough sedimentary rocks. Early vein muscovites have Middle Devonian 40 Ar/ 39 Ar dates of 380-370 Ma. Regional metamorphic biotites from Hill End have well constrained 40 Ar/ 39 Ar closing ages of 360-358 Ma (mid-Famennian). The metamorphic (thermal) maximum which outlasted penetrative deformation. is estimated here by modelling to have been about 370 Ma (latest Givetian). This clearly places the earlier main deformation in the Middle Devonian. Deformation probably began by terminating trough deposition in latest Emsian to early Eifelian time and ended in early Givetian time at about 375 Ma ago. Published pressure and temperature data from the Hill End goldfield suggest that deformation thickened the 6 km sediment column to around 11 km. The thermal model suggests there was post-deformation erosion of about 4km and little if any further erosion occurred during Late Devonian to Early Carboniferous time. The shortening accompanying the inversion of the northern Hill End Trough may have been taken up in the region to the south, both east and west of the Copperhannia Thrust, and east of the southern termination of the Capertee High

Investigation of selection methods im mutation breeding of barley for protein quantity and quality

International Nuclear Information System (INIS)

Ulonska, E.; Gaul, H.; Baumer, M.; Gesellschaft fuer Strahlen- und Umweltforschung m.b.H., Gruenbach

1975-01-01

This mutation breeding programme is investigating the qualification of micro-mutations for the selection of improved protein quality and quantity. Normally, improvement of protein content in micro-mutations is rather small. Therefore, it is important to develop methods and conditions of selection being (a) capable of measuring these small deviations in protein content and quality, and (b) simple to use. In two experiments carried out in 1971 and 1972 nitrogen fertilization was found to be the most important factor in the improvement of selection conditions. There is a highly significant negative correlation between crude protein content and the standard deviation; i.e. the higher the content of crude protein, the lower the variation coefficient. This in turn leads to an increase of genetic variation necessary for better selection progress. Nitrogen fertilization, especially during ear emergence, covers environmental influences - e.g., planting space, sowing rate, growing in different plots (6, 3, 2, 1 rows or in half-ear hills) - to a great extent. Thus, by applying high doses of nitrogen dressings comparable results can be achieved. In an overall selection experiment (testing the entire crossing and mutation material available at Weihenstephan in a stepwise selection from 1971 to 1973) and two selection experiments conducted in 1971 to 1973 with micro-mutants - variety Nota, 4 times X-rayed and the naked barley strain 1606 treated once with EMS - significant selection results were found. (author)

Principal component analysis of biometric traits to reveal body confirmation in local hill cattle of Himalayan state of Himachal Pradesh, India.

Science.gov (United States)

Verma, Deepak; Sankhyan, Varun; Katoch, Sanjeet; Thakur, Yash Pal

2015-12-01

In the present study, biometric traits (body length [BL], heart girth [HG], paunch girth (PG), forelimb length (FLL), hind limb length (HLL), face length, forehead width, forehead length, height at hump, hump length (HL), hook to hook distance, pin to pin distance, tail length (TL), TL up to switch, horn length, horn circumference, and ear length were studied in 218 adult hill cattle of Himachal Pradesh for phenotypic characterization. Morphological and biometrical observations were recorded on 218 hill cattle randomly selected from different districts within the breeding tract. Multivariate statistics and principal component analysis are used to account for the maximum portion of variation present in the original set of variables with a minimum number of composite variables through Statistical software, SAS 9.2. Five components were extracted which accounted for 65.9% of variance. The first component explained general body confirmation and explained 34.7% variation. It was represented by significant loading for BL, HG, PG, FLL, and HLL. Communality estimate ranged from 0.41 (HL) to 0.88 (TL). Second, third, fourth, and fifth component had a high loading for tail characteristics, horn characteristics, facial biometrics, and rear body, respectively. The result of component analysis of biometric traits suggested that indigenous hill cattle of Himachal Pradesh are small and compact size cattle with a medium hump, horizontally placed short ears, and a long tail. The study also revealed that factors extracted from the present investigation could be used in breeding programs with sufficient reduction in the number of biometric traits to be recorded to explain the body confirmation.

HILL: The High-Intensity Laser Laboratory Core Team's Reply to Questions from the NNSA Experimental Facilities Panel

International Nuclear Information System (INIS)

Albright, B.J.

2012-01-01

Question 1 - The type of physics regimes that HILL can access for weapons studies is quite interesting. The question that arises for the proposal team is what priority does this type of experimental data have versus data that can be obtained with NIF, and Z. How does HILL rank in priority compared to MARIE 1.0 in terms of the experimental data it will provide? We reiterate that isochoric heating experiments to be conducted with HILL are complementary to the high energy density physics experiments at NIF and Z and uniquely access states of matter that neither other facility can access. It is our belief that HILL will enable several important questions, e.g., as related to mix morphology, radiation transfer from corrugated surfaces, and equations of state, to be run to ground through carefully diagnosed, 'unit-physics' experiments. Such experiments will substantially improve confidence in our computer models and provide a rigorous science basis for certification. Question 2 - A secondary question relates to the interests of LLNL and SNL in the physics that HILL can address. This should be spelled out clearly. I would like to see the other labs be part of the discussion regarding how important this capability would be if built. Both sister Labs have a keen interest in the physics enabled by high-intensity, high-energy lasers, as evinced by the Z Petawatt and NIF ARC upgrades to their signature facilities. LANL scientists have teamed with scientists from both Laboratories in high-intensity laser 'first experiments' envisioned for HILL and we fully intend to continue these profitable discussions going forward. In the preparation of the HILL proposal, feedback was solicited from the broader HEDP and weapons science communities. The consensus view was that HILL filled a critical gap and that there was a need for a facility like HILL to address outstanding questions in weapons science. It was recognized that co-location of HILL with a facility such as MaRIE 1.0, Z, NIF, or

Geologic map of the Bodie Hills, California and Nevada

Science.gov (United States)

John, David A.; du Bray, Edward A.; Box, Stephen E.; Vikre, Peter G.; Rytuba, James J.; Fleck, Robert J.; Moring, Barry C.

2015-01-01

The Bodie Hills covers about 1,200 km2 straddling the California-Nevada state boundary just north of Mono Lake in the western part of the Basin and Range Province, about 20 km east of the central Sierra Nevada. The area is mostly underlain by the partly overlapping, middle to late Miocene Bodie Hills volcanic field and Pliocene to late Pleistocene Aurora volcanic field (John and others, 2012). Upper Miocene to Pliocene sedimentary deposits, mostly basin-filling sediments, gravel deposits, and fanglomerates, lap onto the west, north, and east sides of the Bodie Hills, where they cover older Miocene volcanic rocks. Quaternary surficial deposits, including extensive colluvial, fluvial, glacial, and lacustrine deposits, locally cover all older rocks. Miocene and younger rocks are tilted ≤30° in variable directions. These rocks are cut by several sets of high-angle faults that exhibit a temporal change from conjugate northeast-striking left-lateral and north-striking right-lateral oblique-slip faults in rocks older than about 9 Ma to north- and northwest-striking dip-slip faults in late Miocene rocks. The youngest faults are north-striking normal and northeast-striking left-lateral oblique-slip faults that cut Pliocene-Pleistocene rocks. Numerous hydrothermal systems were active during Miocene magmatism and formed extensive zones of hydrothermally altered rocks and several large mineral deposits, including gold- and silver-rich veins in the Bodie and Aurora mining districts (Vikre and others, in press).

Radiation-induced mutations and plant breeding

International Nuclear Information System (INIS)

Naqvi, S.H.M.

1985-01-01

Ionizing radiation could cause genetic changes in an organism and could modify gene linkages. The induction of mutation through radiation is random and the probability of getting the desired genetic change is low but can be increased by manipulating different parameters such as dose rate, physical conditions under which the material has been irradiated, etc. Induced mutations have been used as a supplement to conventional plant breeding, particularly for creating genetic variability for specific characters such as improved plant structure, pest and disease resistance, and desired changes in maturity period; more than 200 varieties of crop plants have been developed by this technique. The Pakistan Atomic Energy Commission has used this technique fruitfully to evolve better germplasm in cotton, rice, chickpea, wheat and mungbean; some of the mutants have become popular commercial varieties. This paper describes some uses of radiation induced mutations and the results achieved in Pakistan so far

Clonal mutations in primary human glial tumors: evidence in support of the mutator hypothesis

Directory of Open Access Journals (Sweden)

Sarkar Chitra

2007-10-01

Full Text Available Abstract Background A verifiable consequence of the mutator hypothesis is that even low grade neoplasms would accumulate a large number of mutations that do not influence the tumor phenotype (clonal mutations. In this study, we have attempted to quantify the number of clonal mutations in primary human gliomas of astrocytic cell origin. These alterations were identified in tumor tissue, microscopically confirmed to have over 70% neoplastic cells. Methods Random Amplified Polymorphic DNA (RAPD analysis was performed using a set of fifteen 10-mer primers of arbitrary but definite sequences in 17 WHO grade II astrocytomas (low grade diffuse astrocytoma or DA and 16 WHO grade IV astrocytomas (Glioblastoma Multiforme or GBM. The RAPD profile of the tumor tissue was compared with that of the leucocyte DNA of the same patient and alteration(s scored. A quantitative estimate of the overall genomic changes in these tumors was obtained by 2 different modes of calculation. Results The overall change in the tumors was estimated to be 4.24% in DA and 2.29% in GBM by one method and 11.96% and 6.03% in DA and GBM respectively by the other. The difference between high and lower grade tumors was statistically significant by both methods. Conclusion This study demonstrates the presence of extensive clonal mutations in gliomas, more in lower grade. This is consistent with our earlier work demonstrating that technique like RAPD analysis, unbiased for locus, is able to demonstrate more intra-tumor genetic heterogeneity in lower grade gliomas compared to higher grade. The results support the mutator hypothesis proposed by Loeb.

The mutual dependence of M1 fertility and M2 mutations in rice

International Nuclear Information System (INIS)

Gopinathan Nair, V.

1982-01-01

The mutual dependence of M 1 fertility and M 2 mutations in rice was studied after treatment with gamma rays and EMS. The frequency of chlorophyll mutations increased with decrease in seed fertility when M 1 ears were selected at random. However, at the lowest fertility class the mutation frequency was low. This reduction is attributed to the elimination of mutants in the high sterility class. The mutation yield can therefore be significantly enhanced by selecting M 1 ears of low fertility. The segregation ratio of mutants increased as fertility decreased. Mutation spectrum was however not influenced by M 1 fertility. This makes selection for fertility quite ineffective in altering the mutation spectrum. (author)

Inference of directional selection and mutation parameters assuming equilibrium.

Science.gov (United States)

Vogl, Claus; Bergman, Juraj

2015-12-01

In a classical study, Wright (1931) proposed a model for the evolution of a biallelic locus under the influence of mutation, directional selection and drift. He derived the equilibrium distribution of the allelic proportion conditional on the scaled mutation rate, the mutation bias and the scaled strength of directional selection. The equilibrium distribution can be used for inference of these parameters with genome-wide datasets of "site frequency spectra" (SFS). Assuming that the scaled mutation rate is low, Wright's model can be approximated by a boundary-mutation model, where mutations are introduced into the population exclusively from sites fixed for the preferred or unpreferred allelic states. With the boundary-mutation model, inference can be partitioned: (i) the shape of the SFS distribution within the polymorphic region is determined by random drift and directional selection, but not by the mutation parameters, such that inference of the selection parameter relies exclusively on the polymorphic sites in the SFS; (ii) the mutation parameters can be inferred from the amount of polymorphic and monomorphic preferred and unpreferred alleles, conditional on the selection parameter. Herein, we derive maximum likelihood estimators for the mutation and selection parameters in equilibrium and apply the method to simulated SFS data as well as empirical data from a Madagascar population of Drosophila simulans. Copyright © 2015 Elsevier Inc. All rights reserved.

Geology of the hills in the region of the City of Santiago de Chile: New isotopic constraints

International Nuclear Information System (INIS)

Vergara, M; Lopez-Escobar, I; Palma, J.L; Hickey-Vargas, R

2001-01-01

Geological, geochronological and geochemical data demonstrate that the area where the city of Santiago de Chile is established used to be a huge volcanic field. At present, it is possible to distinguish in the area at least three volcanic cycles, which are geographically superimposed and deeply eroded. The first is Oligocene in age, the second Lower to Middle Miocene and the third is Middle to Upper Miocene. The Oligocene cycle is represented by volcanic and volcanoclastic rocks of the Provincia-San Ramon-Abanico and Conchali belts, and welded tuffs of the San Cristobal and Renca hills. The Lower to Middle Miocene cycle consists of subvolcanic rocks, mostly of basaltic to basaltic-andesite composition, characterized by the presence of clino- and orthopyroxene. The Middle to Upper Miocene cycle is composed predominantly of amphibole-bearing subvolcanic rocks of dacitic composition. The latter are found at the Manquehue hill, which limits the northern part of the city, and the hills at the Rinconada de Conchali. In this communication, we present new Sr-, Nd- and Pb- isotope data obtained from two subvolcanic samples of basaltic composition collected from the San Cristobal hill and at the Santa Lucia hill (Lower to Middle Miocene) and one amphibole-bearing subvolcanic sample of dacitic composition from the Manquehue hill (Middle to Upper Miocene) (au)

Skin prick test reactivity to aeroallergens by filaggrin mutation status

DEFF Research Database (Denmark)

Hougaard, M G; Johansen, J D; Linneberg, A

2014-01-01

BACKGROUND: Studies have shown that filaggrin gene (FLG) mutations are positively associated with sensitization to aero allergens. We hypothesized that FLG mutations would also have an effect on the mean size of positive skin prick test (SPT) reactions as well as the number of positive reactions....... OBJECTIVE: To investigate the effect of FLG mutations on the mean size and the number of positive SPT reactions, as well as the association with positive specific IgE. METHODS: A random sample of 3335 adults from the general population in Denmark was genotyped for the R501X and 2282del4 mutations in the FLG...... mutations alone are insufficient to cause secondary sensitization to allergens. The positive association seen in patients must be explained by a combination of further barrier abnormality caused by dermatitis as well as increased allergen exposure....

Meteorological observations in support of a hill cap cloud experiment

Energy Technology Data Exchange (ETDEWEB)

Nielsen, Morten

1998-06-01

Humid air flows form a hill cap cloud over the Agana mountain ridge in the north-east of Tenerife. The HILLCLOUD project utilised this cloud formation to investigate the chemical and physical properties of cloud aerosols by land based observations. The project was part of the second Aerosol characterisation Experiment (ACE-2) of the International Global Atmospheric chemistry project (IGAC). The present report describes meteorological observations in support of the hill cap cloud experiment. Time-series of wind speed, wind direction, temperature and humidity were collected at ground-based meteorological stations during a period starting one year in advance of the main campaign. A series of radiosonde detecting the upstream stability and wind profile were launched during the main campaign. (au) 5 tabs., 32 ills., 6 refs.

Efficient fractal-based mutation in evolutionary algorithms from iterated function systems

Science.gov (United States)

Salcedo-Sanz, S.; Aybar-Ruíz, A.; Camacho-Gómez, C.; Pereira, E.

2018-03-01

In this paper we present a new mutation procedure for Evolutionary Programming (EP) approaches, based on Iterated Function Systems (IFSs). The new mutation procedure proposed consists of considering a set of IFS which are able to generate fractal structures in a two-dimensional phase space, and use them to modify a current individual of the EP algorithm, instead of using random numbers from different probability density functions. We test this new proposal in a set of benchmark functions for continuous optimization problems. In this case, we compare the proposed mutation against classical Evolutionary Programming approaches, with mutations based on Gaussian, Cauchy and chaotic maps. We also include a discussion on the IFS-based mutation in a real application of Tuned Mass Dumper (TMD) location and optimization for vibration cancellation in buildings. In both practical cases, the proposed EP with the IFS-based mutation obtained extremely competitive results compared to alternative classical mutation operators.

Intercellular distribution of mutations induced in oopcytes of Drosophila melanogaster by chemical and physical mutagens

International Nuclear Information System (INIS)

Traut, H.

1979-01-01

When females of Drosophila melanogaster are treated with chemical or physical mutagens, not only in one but also in both of the two homologous X chromosomes of a given oocyte, a recessive sex-linked lethal mutation may be induced. A method is described that discriminates between such single and double mutations. A theory is developed to show how a comparison betweeen the expected and the observer frequency of double mutations yields an indication of the intercellular distribution (random or nonrandom) of recessive lethal mutations induced by mutagenic agents in oocytes and, consequently, of the distribution (homogenous or nonhomogeneous) of those agents. Three agents were tested: FUdR (12.5, 50.0 and 81.0 μg/ml), mitomycin C (130.0 μg/ml) and x rays (2000 R, 150 kV). After FUdR feeding, no increase in the mutation frequency usually observed in D. melanogaster without mutagenic treatment was obtained (u = 0.13%, namely three single mutations among 2332 chromosomes tested). After mitomycin C feeding 104 single and three double mutations were obtained. All of the 50 mutations observed after x irradiation were single mutations. The results obtained in the mitomycin C and radiation experiments favor the assumption of a random intercellular distribution of recessive lethal mutations induced by these two agents in oocytes of D. melanogaster. Reasons are discussed why for other types of mutagenic agents nonrandom distributions may be observed with our technique

Stratigraphy and paleontology of fossil hill Peninsula Fildes, Rey Jorge island, Antarctica: a new approach

International Nuclear Information System (INIS)

Perea, D.; Masquelin, H.; Verde, M.; Guerequiz, R.

1998-01-01

Results of the first Uruguayan paleontologic and biostratigraphical investigations in Antarctica are presented.The field work was performed in Fildes Peninsula, King George Island, near the Uruguayan station Base Cientifica Antartida Artigas. Some fossiliferous outcrops were geologic and pale ontologically analyzed, among them the Fossil Hill, placed in the middle part of the peninsula, in front of Ardley Island between the Chinese and Chilean stations. This hill is composed of fossil bearing piroclastic and epiclastic rocks, assigned to the Fossil Hill Fm.Vegetal remains (petrified wood and leaf impronts)were observed and collected in this unit and it is remarkable the presence of Nothofagus sp. and invertebrate trace fossils Cochlichnus isp and Helminthopsis isp.

Lithium in Jack Hills zircons: Evidence for extensive weathering of Earth's earliest crust

Science.gov (United States)

Ushikubo, Takayuki; Kita, Noriko T.; Cavosie, Aaron J.; Wilde, Simon A.; Rudnick, Roberta L.; Valley, John W.

2008-08-01

In situ Li analyses of 4348 to 3362 Ma detrital zircons from the Jack Hills, Western Australia by SIMS reveal that the Li abundances (typically 10 to 60 ppm) are commonly over 10,000 times higher than in zircons crystallized from mantle-derived magmas and in mantle-derived zircon megacrysts (typically Jack Hills zircons also have fractionated lithium isotope ratios ( δ7Li = - 19 to + 13‰) about five times more variable than those recorded in primitive ocean floor basalts (2 to 8‰), but similar to continental crust and its weathering products. Values of δ7Li below - 10‰ are found in zircons that formed as early as 4300 Ma. The high Li compositions indicate that primitive magmas were not the source of Jack Hills zircons and the fractionated values of δ7Li suggest that highly weathered regolith was sampled by these early Archean magmas. These new Li data provide evidence that the parent magmas of ancient zircons from Jack Hills incorporated materials from the surface of the Earth that interacted at low temperature with liquid water. These data support the hypothesis that continental-type crust and oceans existed by 4300 Ma, within 250 million years of the formation of Earth and the low values of δ7Li suggest that weathering was extensive in the early Archean.

ACCOMMODATION INFRASTRUCTURE AND TOURISM FLOWS ON FELEACU HILL (CLUJ COUNTY

Directory of Open Access Journals (Sweden)

DANIELA-LIVIA GHEORGHIEȘ

2016-06-01

Full Text Available Accommodation Infrastructure and Tourism Flows on Feleacu Hill (Cluj County. Feleacu Hill experienced tourism development between 2001 and 2015. The INS data indicates that the number of accommodation units increased from one (2001 to four (2015 and there are a few more which are not registered in the INS database. The accommodation capacity increases, as many guesthouses are expanding their premises to receive more tourists and new accommodation units emerge, such as Hotel Premier in Vâlcele (Feleacu commune. Tourism flows also registered a highly positive trend. The number of arrivals increased from 95 tourists in 2002 to 7791 tourists in 2015. However, there was a downturn between 2009 and 2012, due to the economic crisis and the opening of the Turda – Gilău motorway (A3, which redirected transit routes outside the region and led to the closure of Paradis Hotel in 2012. Since 2012, the number of arrivals and overnight stays increased steadily due to the development of new forms of tourism – rural tourism, agrotourism, extreme tourism and complex tourism, materialized in growing numbers of tourists at the two guesthouses in Ciurila commune (“La Mesteceni” and “Domeniul Regilor”. Tourism brings obvious benefits to the rural communities on Feleacu Hill, even if the average duration of stay is still low.

The proterozoic Georgetown Province - a Broken Hill analogue

International Nuclear Information System (INIS)

Carr, G.R.

2000-01-01

Collaborative work between CSIRO and AGSO has resulted in the development of a Pb isotope model that attempts to place relatively precise (∼5 Ma) age constraints on Proterozoic mineralisation in the Mount Isa and McArthur River terrains (Sun et al., 1994). Although this model was developed for sediment hosted mineralisation in low grade metamorphic terrains, the CSIRO-AGSO model ages for other mineralisation in high-grade terrains such as Broken Hill appear to be consistent with the U-Pb zircon ages obtained for the high-grade host sequences. Without independent evidence that the model is applicable to such terrains, the observations cannot be used to indicate the age of the mineralisation. Lead isotope data obtained on potassium feldspar separates from five felsic intrusive samples in the Georgetown terrain show a wide range of Pb isotope ratios. The lowest 206 Pb/ 204 Pb analyses are considered to approximate to the Proterozoic initial ratio and indicate a model age of ∼1510 Ma based on the CSIRO-AGSO model. This age is 45 Ma younger than the crystallisation age of the granite, but must be considered a minimum as the initial 206 Pb/ 204 Pb ratio may well prove to be lower after more comprehensive analysis. Sulfide mineralisation within the Einasleigh Metamorphics has a wide range of 206 Pb/ 204 Pb ratios that lie between this granite value and the relatively homogeneous population from Railway Flat. The Railway Flat data are very similar to values for Broken Hill and also the Broken Hill-type Pegmont mineralisation in the Mount Isa Eastern Succession. These data all have significantly lower 207 Pb/ 204 Pb ratios than the CSIRO-AGSO model, suggesting a significantly different source rock environment for this style of mineralisation from that for the sediment hosted deposits

On the numerical treatment of the Griffin-Hill-Eheeler equation

International Nuclear Information System (INIS)

Galleti, D.; Toledo Piza, A.F.R.

The precision attainable in the numerical treatment of the Griffin-Hill-Wheeler equation is studied in a solvable model. Trucation errors related to the generator coordinate kinematics are exhibited and briefly discussed [pt

Aquatic assessment of the Pike Hill Copper Mine Superfund site, Corinth, Vermont

Science.gov (United States)

Piatak, Nadine M.; Argue, Denise M.; Seal, Robert R.; Kiah, Richard G.; Besser, John M.; Coles, James F.; Hammarstrom, Jane M.; Levitan, Denise M.; Deacon, Jeffrey R.; Ingersoll, Christopher G.

2013-01-01

The Pike Hill Copper Mine Superfund site in Corinth, Orange County, Vermont, includes the Eureka, Union, and Smith mines along with areas of downstream aquatic ecosystem impairment. The site was placed on the U.S. Environmental Protection Agency (USEPA) National Priorities List in 2004. The mines, which operated from about 1847 to 1919, contain underground workings, foundations from historical structures, several waste-rock piles, and some flotation tailings. The mine site is drained to the northeast by Pike Hill Brook, which includes several wetland areas, and to the southeast by an unnamed tributary that flows to the south and enters Cookville Brook. Both brooks eventually drain into the Waits River, which flows into the Connecticut River. The aquatic ecosystem at the site was assessed using a variety of approaches that investigated surface-water quality, sediment quality, and various ecological indicators of stream-ecosystem health. The degradation of surface-water quality is caused by elevated concentrations of copper, and to a lesser extent cadmium, with localized effects caused by aluminum, iron, and zinc. Copper concentrations in surface waters reached or exceeded the USEPA national recommended chronic water-quality criteria for the protection of aquatic life in all of the Pike Hill Brook sampling locations except for the location farthest downstream, in half of the locations sampled in the tributary to Cookville Brook, and in about half of the locations in one wetland area located in Pike Hill Brook. Most of these same locations also contained concentrations of cadmium that exceeded the chronic water-quality criteria. In contrast, surface waters at background sampling locations were below these criteria for copper and cadmium. Comparison of hardness-based and Biotic Ligand Model (BLM)-based criteria for copper yields similar results with respect to the extent or number of stations impaired for surface waters in the affected area. However, the BLM

Solar heating and hot water system installed at Cherry Hill, New Jersey. [Hotels

Energy Technology Data Exchange (ETDEWEB)

1979-05-16

The solar heating and hot water system installed in existing buildings at the Cherry Hill Inn in Cherry Hill, New Jersey is described in detail. The system went into operation November 8, 1978 and is expected to furnish 31.5% of the overall heating load and 29.8% of the hot water load. The collectors are General Electric Company liquid evacuated tube type. The storage system is an above ground insulated steel water tank with a capacity of 7,500 gallons.

The effects of the introduction of the no-smoking policy at HMYOI Warren Hill on bullying behaviour.

Science.gov (United States)

Lawrence, Sally; Welfare, Heather

2008-01-01

The current research explores the prevalence of bullying behaviour at HMYOI Warren Hill and the Carlford Unit. The introduction of the no-smoking policy at the establishment was also explored in relation to its effect on bullying behaviour given that tobacco has historically been the main item that young people have been bullied for. The Direct and Indirect Prisoner behaviour Checklist--Revised (DIPC-R) and a questionnaire designed to identify the effect of the introduction of the no-smoking policy on bullying behaviour were used within this study to answer the following questions: what is the prevalence of bullying behaviour at Warren Hill and the Carlford Unit, and do young people at Warren Hill and the Carlford Unit think that the rate and nature of bullying has been affected by the introduction of the no-smoking policy? One hundred and fifteen young people took part in the study. At Warren Hill, Bully/Victims were the most prevalent type identified and this was significantly greater than the number of young people identified as Pure Victims or Not Involved. On the Carlford Unit, Not Involved was the most prevalent type identified, and this finding provides limited support for the theories of bullying behaviour identified within the present study. The study found that the rate of bullying decreased following the introduction of the no-smoking policy at Warren Hill. The findings from this study are being used in the development of a new Violence Reduction Policy at HMYOI Warren Hill.

Lithostratigraphy of the Calico Hills Formation and Prow Pass Tuff (Crater Flat Group) at Yucca Mountain, Nevada

International Nuclear Information System (INIS)

Moyer, T.C.; Geslin, J.K.

1995-01-01

Lithostratigraphic relations within the Calico Hills Formation and Prow Pass Tuff (Crater Flat Group) were reconstructed from analysis of core samples and observation of outcrop exposures. The Calico Hills Formation is composed of five nonwelded pyroclastic units (each formed of one or more pyroclastic-flow deposits) that overlie an interval of bedded tuff and a basal volcaniclastic sandstone unit. The Prow Pass Tuff is divided into four pyroclastic units and an underlying interval of bedded tuff. The pyroclastic units of the Prow Pass Tuff are distinguished by the sizes and amounts of their pumice and lithic clasts and their degree of welding. Pyroclastic units of the Prow Pass Tuff are distinguished from those of the Calico Hills Formation by their phenocryst assemblage, chemical composition, and ubiquitous siltstone lithic clasts. Downhole resistivity tends to mirror the content of authigenic minerals, primarily zeolites, in both for-mations and may be useful for recognizing the vitric-zeolite boundary in the study area. Maps of zeolite distribution illustrate that the bedded tuff and basal sandstone units of the Calico Hills Formation are altered over a wider area than the pyroclastic units of both the Calico Hills Formation and the upper Prow Pass Tuff

Lithostratigraphy of the Calico Hills Formation and Prow Pass Tuff (Crater Flat Group) at Yucca Mountain, Nevada

Energy Technology Data Exchange (ETDEWEB)

Moyer, T.C.; Geslin, J.K. [Science Applications International Corp., Las Vegas, NV (United States)

1995-07-01

Lithostratigraphic relations within the Calico Hills Formation and Prow Pass Tuff (Crater Flat Group) were reconstructed from analysis of core samples and observation of outcrop exposures. The Calico Hills Formation is composed of five nonwelded pyroclastic units (each formed of one or more pyroclastic-flow deposits) that overlie an interval of bedded tuff and a basal volcaniclastic sandstone unit. The Prow Pass Tuff is divided into four pyroclastic units and an underlying interval of bedded tuff. The pyroclastic units of the Prow Pass Tuff are distinguished by the sizes and amounts of their pumice and lithic clasts and their degree of welding. Pyroclastic units of the Prow Pass Tuff are distinguished from those of the Calico Hills Formation by their phenocryst assemblage, chemical composition, and ubiquitous siltstone lithic clasts. Downhole resistivity tends to mirror the content of authigenic minerals, primarily zeolites, in both for-mations and may be useful for recognizing the vitric-zeolite boundary in the study area. Maps of zeolite distribution illustrate that the bedded tuff and basal sandstone units of the Calico Hills Formation are altered over a wider area than the pyroclastic units of both the Calico Hills Formation and the upper Prow Pass Tuff.

Susceptibility of Shallow Landslide in Fraser Hill Catchment, Pahang Malaysia

Directory of Open Access Journals (Sweden)

Wan Nor Azmin Sulaiman

2010-01-01

Full Text Available In tropical areas especially during monsoon seasons intense precipitation is the main caused that trigger the natural shallow landslide phenomena. This phenomenon can be disastrous and widespread in occurrence even in undisturbed forested catchment. In this paper, an attempt has been made to evaluate the susceptibility of natural hill slopes to failure for a popular hill resort area, the Fraser Hill Catchment under different rainfall regimes and soil thickness. A Digital Elevation Model (DEM was prepared for the 8.2 km2 catchment. A GIS based deterministic model was then applied to predict the spatial landslide occurrence within catchment. Model input parameters include bulk density, friction angle, cohesion and hydraulic conductivity were gathered through in situ and lab analysis as well as from previous soil analysis records. Landslides locations were recorded using GPS as well as previous air photos and satellite imagery to establish landslide source areas inventory. The landslide susceptibility map was produced under different precipitation event’s simulation to see the effects of precipitation to stability of the hill slopes of the catchment. The results were categorized into naturally unstable (Defended, Upper Threshold, Lower Threshold, marginal instability (Quasi Stable and stable area (Moderately Stable and Stable. Results of the simulation indicated notable change in precipitation effect on Defended area is between 10mm to 40mm range in a single storm event. However, when storm event is exceeded 120mm, the result on Defended area produced by the model tends to be constant further on. For area categorized as naturally unstable (Factor of Safety, SF<1, with 110 mm of precipitation in a single storm event and soil depth at 2 meters and 4 meters could affect 69.51% and 69.88% respectively of the catchment area fall under that class. In addition, the model was able to detect 4% more of the landslide inventory under shallower soil depth of

Evolutionary constraints and the neutral theory. [mutation-caused nucleotide substitutions in DNA

Science.gov (United States)

Jukes, T. H.; Kimura, M.

1984-01-01

The neutral theory of molecular evolution postulates that nucleotide substitutions inherently take place in DNA as a result of point mutations followed by random genetic drift. In the absence of selective constraints, the substitution rate reaches the maximum value set by the mutation rate. The rate in globin pseudogenes is about 5 x 10 to the -9th substitutions per site per year in mammals. Rates slower than this indicate the presence of constraints imposed by negative (natural) selection, which rejects and discards deleterious mutations.

Experimental Determination and Prediction of the Fitness Effects of Random Point Mutations in the Biosynthetic Enzyme HisA

Science.gov (United States)

Lundin, Erik; Tang, Po-Cheng; Guy, Lionel; Näsvall, Joakim; Andersson, Dan I

2018-01-01

Abstract The distribution of fitness effects of mutations is a factor of fundamental importance in evolutionary biology. We determined the distribution of fitness effects of 510 mutants that each carried between 1 and 10 mutations (synonymous and nonsynonymous) in the hisA gene, encoding an essential enzyme in the l-histidine biosynthesis pathway of Salmonella enterica. For the full set of mutants, the distribution was bimodal with many apparently neutral mutations and many lethal mutations. For a subset of 81 single, nonsynonymous mutants most mutations appeared neutral at high expression levels, whereas at low expression levels only a few mutations were neutral. Furthermore, we examined how the magnitude of the observed fitness effects was correlated to several measures of biophysical properties and phylogenetic conservation.We conclude that for HisA: (i) The effect of mutations can be masked by high expression levels, such that mutations that are deleterious to the function of the protein can still be neutral with regard to organism fitness if the protein is expressed at a sufficiently high level; (ii) the shape of the fitness distribution is dependent on the extent to which the protein is rate-limiting for growth; (iii) negative epistatic interactions, on an average, amplified the combined effect of nonsynonymous mutations; and (iv) no single sequence-based predictor could confidently predict the fitness effects of mutations in HisA, but a combination of multiple predictors could predict the effect with a SD of 0.04 resulting in 80% of the mutations predicted within 12% of their observed selection coefficients. PMID:29294020

Randomized Adjuvant Chemotherapy of EGFR-Mutated Non-Small Cell Lung Cancer Patients with or without Icotinib Consolidation Therapy.

Science.gov (United States)

Feng, Siyang; Wang, Yuanyuan; Cai, Kaican; Wu, Hua; Xiong, Gang; Wang, Haofei; Zhang, Ziliang

2015-01-01

Epidermal growth factor receptor (EGFR) mutations occur in up to 50% of Asian patients with non-small cell lung cancer (NSCLC). Treatment of advanced NSCLC patients with EGFR-tyrosine kinase inhibitor (EGFR-TKI) confers a significant survival benefit. This study assessed the efficacy and safety of chemotherapy with or without icotinib in patients undergoing resection of stage IB to ⅢA EGFR-mutated NSCLC. Patients with surgically resected stage IB (with high risk factors) to ⅢA EGFR-mutated NSCLC were randomly assigned (1:1) to one of two treatment plans. One group received four cycles of platinum-based doublet chemotherapy every three weeks, and the other group received platinum-based chemotherapy supplemented with consolidation therapy of orally administered icotinib (125 mg thrice daily) two weeks after chemotherapy. The icotinib treatment continued for four to eight months, or until the occurrence of disease relapse, metastasis or unacceptable icotinib or chemotherapy toxicity. The primary endpoint was disease-free survival (DFS). 41 patients were enrolled between Feb 9, 2011 and Dec 17, 2012. 21 patients were assigned to the combined chemotherapy plus icotinib treatment group, while 20 patients received chemotherapy only. DFS at 12 months was 100% for icotinib-treated patients and 88.9% for chemotherapy-only patients (p = 0. 122). At 18 months DFS for icotinib-treated vs. chemotherapy-only patients was 95.2% vs. 83.3% (p = 0. 225), respectively, and at 24 months DFS was 90.5% vs. 66.7% (p = 0. 066). The adverse chemotherapy effects predominantly presented as gastrointestinal reactions and marrow suppression, and there was no significant difference between the two treatment groups. Patients in the chemotherapy plus icotinib treatment group showed favorable tolerance to oral icotinib. The results suggest that chemotherapy plus orally icotinib displayed better DFS compared with chemotherapy only, yet the difference in DFS was not significant. We would think

Randomized Adjuvant Chemotherapy of EGFR-Mutated Non-Small Cell Lung Cancer Patients with or without Icotinib Consolidation Therapy.

Directory of Open Access Journals (Sweden)

Siyang Feng

Full Text Available Epidermal growth factor receptor (EGFR mutations occur in up to 50% of Asian patients with non-small cell lung cancer (NSCLC. Treatment of advanced NSCLC patients with EGFR-tyrosine kinase inhibitor (EGFR-TKI confers a significant survival benefit. This study assessed the efficacy and safety of chemotherapy with or without icotinib in patients undergoing resection of stage IB to ⅢA EGFR-mutated NSCLC.Patients with surgically resected stage IB (with high risk factors to ⅢA EGFR-mutated NSCLC were randomly assigned (1:1 to one of two treatment plans. One group received four cycles of platinum-based doublet chemotherapy every three weeks, and the other group received platinum-based chemotherapy supplemented with consolidation therapy of orally administered icotinib (125 mg thrice daily two weeks after chemotherapy. The icotinib treatment continued for four to eight months, or until the occurrence of disease relapse, metastasis or unacceptable icotinib or chemotherapy toxicity. The primary endpoint was disease-free survival (DFS.41 patients were enrolled between Feb 9, 2011 and Dec 17, 2012. 21 patients were assigned to the combined chemotherapy plus icotinib treatment group, while 20 patients received chemotherapy only. DFS at 12 months was 100% for icotinib-treated patients and 88.9% for chemotherapy-only patients (p = 0. 122. At 18 months DFS for icotinib-treated vs. chemotherapy-only patients was 95.2% vs. 83.3% (p = 0. 225, respectively, and at 24 months DFS was 90.5% vs. 66.7% (p = 0. 066. The adverse chemotherapy effects predominantly presented as gastrointestinal reactions and marrow suppression, and there was no significant difference between the two treatment groups. Patients in the chemotherapy plus icotinib treatment group showed favorable tolerance to oral icotinib.The results suggest that chemotherapy plus orally icotinib displayed better DFS compared with chemotherapy only, yet the difference in DFS was not significant. We would

Paul Hill d/b/a Alternative Energy Windows and Siding

Science.gov (United States)

Paul Hill d/b/a Alternative Energy Windows and Siding (the Company) is located in Concord, New Hampshire. The settlement involves renovation activities conducted at property constructed prior to 1978, located in Concord, New Hampshire.

Informal household water market and determinants of price: Evidence from an Indian hill city

Science.gov (United States)

Pal, Manoranjan; De, Utpal Kumar

2015-02-01

Pricing of water in the hill cities in India is different from that of plain lands, because water is a scarce resource in most of the hill cities. The supply of water by the municipalities is inadequate. The private vendors come into picture and they put the prices according to the difficulties faced in supplying to the specific locations. Thus prices become variables and are also based on the economic demand-supply mechanism in which the households try to maximise their satisfaction subject to budget and other constraints, while the vendors try to extract as much benefit as possible from the buyers. This paper tries to examine the pricing of household water use in Shillong urban area, India and the impact of various factors including income, house rent, seasonal scarcity of water, capacity of municipal supply, household size on the price-quantity determination. The analysis is made in terms of a simultaneous equation framework and the model is applied to a data collected by stratified random sampling technique across the municipal wards and non-municipal segments of greater Shillong urban Agglomeration. The result of three stage least squares reveals significant positive impacts of income, scarcity of water on the demand price while significantly negative impacts of quantity purchased, extent of municipal supply, house rent paid on the demand price. But the household size does not have any significant impact on the demand price though large household is expected to require more water. The supply of water on the other hand is not significantly affected by price, extent of municipal supply and deficiency though the coefficients are in the expected line.

Food security and ecological footprint of chittagong hill tracts in bangladesh

International Nuclear Information System (INIS)

Bala, B.K.; Hossain, M.A.

2014-01-01

This paper presents food security and ecological footprint of the Chittagong Hill Tracts (CHT) in Bangladesh. To estimate food security and ecological footprint, primary and secondary data were collected and a multistage sampling was designed for selecting the farm households from the three districts of the Hill Tracts of Chittagong. A quantitative method for computation of food security was used. To estimate the environmental sustainability sustainability as upazila (sub-district) levels, a method of computation of ecological footprint developed by Wackernagel was used. Multiple logistic regression models were fitted to data on food security of the farmers in CHT to identify the factors affecting food security at household levels in CHT. Overall status of food security at upazila levels was found to be good for all the upazilas except Rangamati sadar and the best was found Alikadam. Environmental status in the Hill Tracts of Chittagong was poor for all the upazilas. Household food security was found to be significantly (p<0.05) affected by farm size, education, professions, crops cultivated (jhum and tobacco), distance from market and transition from jhum to horticulture. This study supports transition from jhum to horticulture crops for increased food security and banning tobacco cultivation to avoid deforestation in CHT. (author)

USGS Hill Shade Base Map Service from The National Map

Data.gov (United States)

U.S. Geological Survey, Department of the Interior — USGS Hill Shade (or Shaded Relief) is a tile cache base map created from the National Elevation Dataset (NED), a seamless dataset of best available raster elevation...

NPP Grassland: Beacon Hill, U.K., 1972-1993, R1

Data.gov (United States)

National Aeronautics and Space Administration — This data set contains two ASCII text files, one providing productivity measurements for a chalk grassland on Beacon Hill, West Sussex, U.K. (50.92 N, -0.85 W) and...

Strong effects of ionizing radiation from Chernobyl on mutation rates

OpenAIRE

M?ller, Anders Pape; Mousseau, Timothy A.

2015-01-01

In this paper we use a meta-analysis to examine the relationship between radiation and mutation rates in Chernobyl across 45 published studies, covering 30 species. Overall effect size of radiation on mutation rates estimated as Pearson's product-moment correlation coefficient was very large (E = 0.67; 95% confidence intervals (CI) 0.59 to 0.73), accounting for 44.3% of the total variance in an unstructured random-effects model. Fail-safe calculations reflecting the number of unpublished null...

Analysis of alkaptonuria (AKU) mutations and polymorphisms reveals that the CCC sequence motif is a mutational hot spot in the homogentisate 1,2 dioxygenase gene (HGO).

Science.gov (United States)

Beltrán-Valero de Bernabé, D; Jimenez, F J; Aquaron, R; Rodríguez de Córdoba, S

1999-01-01

We recently showed that alkaptonuria (AKU) is caused by loss-of-function mutations in the homogentisate 1,2 dioxygenase gene (HGO). Herein we describe haplotype and mutational analyses of HGO in seven new AKU pedigrees. These analyses identified two novel single-nucleotide polymorphisms (INV4+31A-->G and INV11+18A-->G) and six novel AKU mutations (INV1-1G-->A, W60G, Y62C, A122D, P230T, and D291E), which further illustrates the remarkable allelic heterogeneity found in AKU. Reexamination of all 29 mutations and polymorphisms thus far described in HGO shows that these nucleotide changes are not randomly distributed; the CCC sequence motif and its inverted complement, GGG, are preferentially mutated. These analyses also demonstrated that the nucleotide substitutions in HGO do not involve CpG dinucleotides, which illustrates important differences between HGO and other genes for the occurrence of mutation at specific short-sequence motifs. Because the CCC sequence motifs comprise a significant proportion (34.5%) of all mutated bases that have been observed in HGO, we conclude that the CCC triplet is a mutational hot spot in HGO. PMID:10205262

Ethnoveterinary medicine of the Shervaroy Hills of Eastern Ghats, India as alternative medicine for animals.

Science.gov (United States)

Usha, Swaminathan; Rajasekaran, Chandrasekaran; Siva, Ramamoorthy

2016-01-01

The Eastern Ghats of India is well known for its wealth of natural vegetation and Shervaroy is a major hill range of the Eastern Ghats of Tamil Nadu. Ethnomedicinal studies in the Eastern Ghats of Tamil Nadu or the Shervaroy Hills have been carried out by various researchers. However, there is not much information available on ethnoveterinary medicine in the Eastern Ghats of India. The aim of this study was to examine the potential use of folk plants as alternative medicine for cattle to cure various diseases in the Shervaroy Hills of the Eastern Ghats. Based on interactions with traditional medicine practitioners, it has been observed that a total of 21 medicinal plants belonging to 16 families are used to cure various diseases such as mastitis, enteritis, arthritis, stomatitis, salivation from the mouth, wounding, and conjunctivitis in animals. It has been observed that the traditional knowledge of ethnoveterinary medicine is now confined only among the surviving older people and a few practitioners in the tribal communities of the Shervaroy Hills. Unfortunately, no serious attempts have been made to document and preserve this immense treasure of traditional knowledge.

Prevalence of anemia, iron deficiency, thalassemia and glucose-6-phosphate dehydrogenase deficiency among hill-tribe school children in Omkoi District, Chiang Mai Province, Thailand.

Science.gov (United States)

Yanola, Jintana; Kongpan, Chatpat; Pornprasert, Sakorn

2014-07-01

The prevalaence of anemia, iron deficiency, thalassemia and glucose-6-phosphate dehydrogenase (G-6-PD) deficiency were examined among 265 hill-tribe school children, 8-14 years of age, from Omkoi District, Chiang Mai Province, Thailand. Anemia was observed in 20 school children, of whom 3 had iron deficiency anemia. The prevalence of G-6-PD deficiency and β-thalassemia trait [codon 17 (A>T), IVSI-nt1 (G>T) and codons 71/72 (+A) mutations] was 4% and 8%, respectively. There was one Hb E trait, and no α-thalassemia-1 SEA or Thai type deletion. Furthermore, anemia was found to be associated with β-thalassemia trait in 11 children. These data can be useful for providing appropriate prevention and control of anemia in this region of Thailand.

Current prevalence of intestinal parasitic infections and their impact on hematological and nutritional status among Karen hill tribe children in Omkoi District, Chiang Mai Province, Thailand.

Science.gov (United States)

Yanola, Jintana; Nachaiwieng, Woottichai; Duangmano, Suwit; Prasannarong, Mujalin; Somboon, Pradya; Pornprasert, Sakorn

2018-04-01

Intestinal parasitic infection represents a substantial problem for children living in rural or limited resources areas and significantly relates to anemia and nutritional status. This study aimed to determine the current prevalence of intestinal parasitic infections among school-age children of Karen hill tribe population in Omkoi District, Chiang Mai Province, Thailand and assess the impact of intestinal parasitic infection on hematological and nutritional status in those children. A total of 375 Karen hill tribe children, 6-14 years of age, in Omkoi District were randomly selected to participate in this study. Stool samples were collected and examined for intestinal parasitic infection through formalin-ether concentration method. Blood samples were collected for hematological and iron analysis. The overall prevalence of intestinal parasitic infection was 47.7% (179/375), with single infections (29.3%) and polyparatism (18.4%). The most common pathogenic parasite was Trichuris trichiura (16.0%), followed by Ascaris lumbricoides (13%) and Giardia lamblia (3.5%). In addition, non-pathogenic amoeba, Entamoeba coli was observed with a high prevalence rate (31.2%). Anemia and eosinophilia prevalence were 6.40% (24/375) and 74.7% (280/375), respectively. Eosinophilia was significantly more prevalent in children with intestinal parasitic infection compared to uninfected children. Among 249 children, 13.7% were iron deficiency, 9.6% were thalassemia and hemoglobinophathy and 8% were G-6-PD deficiency. A high prevalence infection rate was significantly associated with eosinophilia, but independently related to anemia and iron deficiency. Intestinal parasitic infections are endemic in school-age children of Karen hill tribe population in Omkoi District. These data highlight the need for an integrated approach to control transmission of intestinal parasites and improve the health and sanitation status of Karen hill tribe children in Thailand. Copyright © 2018 Elsevier B

77 FR 47625 - Laurel Hill Wind Energy, LLC; Supplemental Notice That Initial Market-Based Rate Filing Includes...

Science.gov (United States)

2012-08-09

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Docket No. ER12-2313-000] Laurel Hill Wind Energy, LLC; Supplemental Notice That Initial Market-Based Rate Filing Includes Request For... Laurel Hill Wind Energy, LLC's application for market-based rate authority, with an accompanying rate...

Amphibian diversity in Shimba Hills National Reserve, Kenya: A ...

African Journals Online (AJOL)

We present the first annotated amphibian checklist of Shimba Hills National Reserve (SHNR). The list comprises of 30 currently known amphibians (28 anurans and two caecilians), which includes 11 families and 15 genera. In addition, individual records per species, distribution in the reserve and brief remarks about the ...

Impact of nutrition education on knowledge and haemoglobin status of hill women in Uttarakhand State of India.

Science.gov (United States)

Upadhyay, S; Kumar, A R; Raghuvanshi, R S; Singh, B B

2011-12-01

This study aimed to examine the impact of the use of single vs. combination of media on nutritional knowledge and haemoglobin status of women in a rural hill area in Uttarakhand State, India. Women from three villages were selected randomly and divided into three groups namely, print media group (n = 59), multimedia group (n = 53) and control group (n = 111). The print media group was exposed to nutrition education through the use of calendars on anaemia for 60 days; the multimedia group was given nutrition education through a combination of media including calendars, video films, and group discussions for 60 days. At pre-exposure stage, 62.7% of the women in the print media group, 67.9% of the multimedia group, and 66.7% of the control group had a low nutrition knowledge level. After exposure, the print media group and the multimedia group showed a significant rise in nutrition knowledge, with the multimedia group scoring significantly higher than the print media group. Overall, 69.1% of the women were anaemic with mean haemoglobin concentration of 10.74 +/- 0.86 g/dl. A non-significant rise in mean haemoglobin concentrations in the experimental groups was found at post-exposure stage. Calendars and video films are effective in increasing nutrition knowledge of illiterate hill women. Use of mass media programmes of longer duration should be encouraged to combat the nutritional problems of rural communities.

Interleukin-7 receptor-α gene mutations are not detected in adult T-cell acute lymphoblastic leukemia

International Nuclear Information System (INIS)

Rozovski, Uri; Li, Ping; Harris, David; Ohanian, Maro; Kantarjian, Hagop; Estrov, Zeev

2014-01-01

Somatic mutations in cancer cell genes are classified according to their functional significance. Those that provide the malignant cells with significant advantage are collectively referred to as driver mutations and those that do not, are the passenger mutations. Accordingly, analytical criteria to distinguish driver mutations from passenger mutations have been recently suggested. Recent studies revealed mutations in interleukin-7 receptor-α (IL7R) gene in 10% of pediatric T-cell acute lymphoblastic leukemia (T-ALL) patients and in only a few cases of pediatric B-ALL. IL7R mutations are also frequently found in patients with lung cancer, but whereas in pediatric T-ALL IL7R mutations are “drivers” (consisting of gain-of-function mutations within a narrow 50-base pair interval at exon 6 that confer cytokine-independent cell growth and promote tumor transformation), in lung cancer, mutations are substitution mutations randomly distributed across the gene and are probably only “passenger” events. Because the treatment response of adult T-ALL is significantly poorer than that of childhood T-ALL and because exon 6 IL7R mutations play a role in the pathogenesis of childhood T-ALL, we sought to determine how the pattern of IL7R mutations varies between adult and childhood T-ALL. To that end, we sequenced the 50-base pair interval in exon 6 of the IL7R of DNA obtained from bone marrow samples of 35 randomly selected adult patients with T-ALL. Our analysis revealed that none of these 35 samples carried an IL7R mutation in exon 6. Whether differences in the genetic makeup of adult and childhood T-ALL explain the differential response to therapy remains to be determined

Crystal chemistry of pyrochlore from the Mesozoic Panda Hill carbonatite deposit, western Tanzania

Science.gov (United States)

Boniface, Nelson

2017-02-01

The Mesozoic Panda Hill carbonatite deposit in western Tanzania hosts pyrochlore, an ore and source of niobium. This study was conducted to establish the contents of radioactive elements (uranium and thorium) in pyrochlore along with the concentration of niobium in the ore. The pyrochlore is mainly hosted in sövite and is structurally controlled by NW-SE (SW dipping) or NE-SW (NW dipping) magmatic flow bands with dip angles of between 60° and 90°. Higher concentrations of pyrochlore are associated with magnetite, apatite and/or phlogopite rich flow bands. Electron microprobe analyses on single crystals of pyrochlore yield very low UO2 concentrations that range between 0 and 0.09 wt% (equivalent to 0 atoms per formula unit: a.p.f.u.) and ThO2 between 0.55 and 1.05 wt% (equivalent to 0.1 a.p.f.u.). The analyses reveal high concentrations of Nb2O5 (ranging between 57.13 and 65.50 wt%, equivalent to a.p.f.u. ranging between 1.33 and 1.43) and therefore the Panda Hill Nb-oxide is classified as pyrochlore sensu stricto. These data point to a non radioactive pyrochlore and a deposit rich in Nb at Panda Hill. The Panda Hill pyrochlore has low concentrations of REEs as displayed by La2O3 that range between 0.10 and 0.49 wt% (equivalent to a.p.f.u. ranging between 0 and 0.01) and Ce2O3 ranging between 0.86 and 1.80 wt% (equivalent to a.p.f.u. ranging between 0.02 and 0.03), Pr2O3 concentrations range between 0 and 0.23 wt% (equivalent to 0 a.p.f.u.), and Y2O3 is 0 wt% (equivalent to 0 a.p.f.u.). The abundance of the REEs in pyroclore at the Panda Hill Carbonatite deposit is of no economic significance.

Petrographic and geochemical data for Cenozoic volcanic rocks of the Bodie Hills, California and Nevada

Science.gov (United States)

du Bray, Edward A.; John, David A.; Box, Stephen E.; Vikre, Peter G.; Fleck, Robert J.; Cousens, Brian L.

2013-04-23

Petrographic and geochemical data for Cenozoic volcanic rocks of the Bodie Hills, California and Nevada // // This report presents petrographic and geochemical data for samples collected during investigations of Tertiary volcanism in the Bodie Hills of California and Nevada. Igneous rocks in the area are principally 15–6 Ma subduction-related volcanic rocks of the Bodie Hills volcanic field but also include 3.9–0.1 Ma rocks of the bimodal, post-subduction Aurora volcanic field. Limited petrographic results for local basement rocks, including Mesozoic granitoid rocks and their metamorphic host rocks, are also included in the compilation. The petrographic data include visual estimates of phenocryst abundances as well as other diagnostic petrographic criteria. The geochemical data include whole-rock major oxide and trace element data, as well as limited whole-rock isotopic data.

Conservation assessment for the autumn willow in the Black Hills National Forest, South Dakota and Wyoming

Science.gov (United States)

J. Hope Hornbeck; Carolyn Hull Sieg; Deanna J. Reyher

2003-01-01

Autumn willow, Salix serissima (Bailey) Fern., is an obligate wetland shrub that occurs in fens and bogs in the northeastern United States and eastern Canada. Disjunct populations of autumn willow occur in the Black Hills of South Dakota. Only two populations occur on Black Hills National Forest lands: a large population at McIntosh Fen and a small...

78 FR 76100 - Black Hills National Forest Advisory Board

Science.gov (United States)

2013-12-16

...: The Black Hills National Forest Advisory Board (Board) will meet in Rapid City, South Dakota. The... Ranger District, 8221 South Highway 16, Rapid City, South Dakota. Written comments may be submitted as... the public. The agenda will include time for people to make oral statements of three minutes or less...

Multiple-scale roost habitat comparisons of female Merriam's wild turkeys in the southern Black Hills, South Dakota

Science.gov (United States)

Daniel J. Thompson; Mark A. Rumble; Lester D. Flake; Chad P. Lehman

2009-01-01

Because quantity and quality of roosting habitat can affect Merriam's Wild Turkey (Meleagris gallopavo merriami) distribution, we described habitat characteristics of Merriam's turkey roost sites in the southern Black Hills of South Dakota. Varying proportions of Merriam's turkeys in the southern Black Hills depended on supplemental feed from livestock...

Elevated mutation rate during meiosis in Saccharomyces cerevisiae.

Science.gov (United States)

Rattray, Alison; Santoyo, Gustavo; Shafer, Brenda; Strathern, Jeffrey N

2015-01-01

Mutations accumulate during all stages of growth, but only germ line mutations contribute to evolution. While meiosis contributes to evolution by reassortment of parental alleles, we show here that the process itself is inherently mutagenic. We have previously shown that the DNA synthesis associated with repair of a double-strand break is about 1000-fold less accurate than S-phase synthesis. Since the process of meiosis involves many programmed DSBs, we reasoned that this repair might also be mutagenic. Indeed, in the early 1960's Magni and Von Borstel observed elevated reversion of recessive alleles during meiosis, and found that the revertants were more likely to be associated with a crossover than non-revertants, a process that they called "the meiotic effect." Here we use a forward mutation reporter (CAN1 HIS3) placed at either a meiotic recombination coldspot or hotspot near the MAT locus on Chromosome III. We find that the increased mutation rate at CAN1 (6 to 21 -fold) correlates with the underlying recombination rate at the locus. Importantly, we show that the elevated mutation rate is fully dependent upon Spo11, the protein that introduces the meiosis specific DSBs. To examine associated recombination we selected for random spores with or without a mutation in CAN1. We find that the mutations isolated this way show an increased association with recombination (crossovers, loss of crossover interference and/or increased gene conversion tracts). Polζ appears to contribute about half of the mutations induced during meiosis, but is not the only source of mutations for the meiotic effect. We see no difference in either the spectrum or distribution of mutations between mitosis and meiosis. The correlation of hotspots with elevated mutagenesis provides a mechanism for organisms to control evolution rates in a gene specific manner.

Orno-Cotino-Quercetum Pubescentis Ass. nova prov. on the slopes of Titel hill (Serbia

Directory of Open Access Journals (Sweden)

Butorac Branislava

2008-01-01

Full Text Available Studied by many botanists from the floristic and vegetation-geographical aspects over the last hundred years, the herbaceous plant cover in dominant on Titel Hill. The first data on plant communities were registered in 1983, when a significant contribution to the study of vegetation of steppe character was made. At that time, presence of shrubby remnants of forest vegetation on Titel Hill was registered. Since 1983, fragments of typical xerothermic woods of pubescent oak have been registered.

Hill Cipher and Least Significant Bit for Image Messaging Security

Directory of Open Access Journals (Sweden)

Muhammad Husnul Arif

2016-02-01

Full Text Available Exchange of information through cyberspace has many benefits as an example fast estimated time, unlimited physical distance and space limits, etc. But in these activities can also pose a security risk for confidential information. It is necessary for the safety that can be used to protect data transmitted through the Internet. Encryption algorithm that used to encrypt message to be sent (plaintext into messages that have been randomized (ciphertext is cryptography and steganography algorithms. In application of cryptographic techniques that will be used is Hill Cipher. The technique is combined with steganography techniques Least Significant Bit. The result of merging techniques can maintain the confidentiality of messages because people who do not know the secret key used will be difficult to get the message contained in the stego-image and the image that has been inserted can not be used as a cover image. Message successfully inserted and extracted back on all samples with a good image formats * .bmp, * .png , * .jpg at a resolution of 512 x 512 pixels , 256 x 256 pixels. MSE and PSNR results are not influenced file format or file size, but influenced by dimensions of image. The larger dimensions of the image, then the smaller MSE that means error of image gets smaller.

Performance of Garden Pea Genotypes in Eastern Hills of Nepal

Directory of Open Access Journals (Sweden)

Krishna Poudel

2017-05-01

Full Text Available Garden pea (Pisum sativum L is an important winter legume used as fresh vegetables and other drier food products. Despite of its importance as cash crop in many parts of Nepal, much study on various aspects for enhancing production and productivity has yet to be done. Therefore, to evaluate the production performance different genotypes of garden pea in eastern hills agro-ecological conditions present experiments were carried out consecutively for two years (2015 and 2016 at Agricultural Research Station, Pakhribas. The experiment comprised of 11 different genotypes of garden pea including a check variety Arkel. The production performance was evaluated in a completely randomized block design with three replications. The seeds were sown at 50 × 10 cm spacing during first week of October for two years. The result showed that DGP-05 genotype had earliest 104 days after sowing. The DGP-08 genotype showed 13 which were the maximum numbers of pods per plant (13, while DGP-01 showed 8 numbers of seeds as the maximum per pod. The DGP-03 genotype had the longest pod of 9.78 cm among others. The highest fresh pod yield of 18.14 t/ha was achieved from genotype DGP-09 followed by Arkel with (16.32 t/ha.

The Generalized Hill Model: A Kinematic Approach Towards Active Muscle Contraction

Science.gov (United States)

Menzel, Andreas; Kuhl, Ellen

2014-01-01

Excitation-contraction coupling is the physiological process of converting an electrical stimulus into a mechanical response. In muscle, the electrical stimulus is an action potential and the mechanical response is active contraction. The classical Hill model characterizes muscle contraction though one contractile element, activated by electrical excitation, and two non-linear springs, one in series and one in parallel. This rheology translates into an additive decomposition of the total stress into a passive and an active part. Here we supplement this additive decomposition of the stress by a multiplicative decomposition of the deformation gradient into a passive and an active part. We generalize the one-dimensional Hill model to the three-dimensional setting and constitutively define the passive stress as a function of the total deformation gradient and the active stress as a function of both the total deformation gradient and its active part. We show that this novel approach combines the features of both the classical stress-based Hill model and the recent active-strain models. While the notion of active stress is rather phenomenological in nature, active strain is micro-structurally motivated, physically measurable, and straightforward to calibrate. We demonstrate that our model is capable of simulating excitation-contraction coupling in cardiac muscle with its characteristic features of wall thickening, apical lift, and ventricular torsion. PMID:25221354

Key tiger habitats in the Garo Hills of Meghalaya

Science.gov (United States)

Ashish Kumar; Bruce G. Marcot

2010-01-01

We describe assumed tiger habitat characteristics and attempt to identify potential tiger habitats in the Garo Hills region of Meghalaya, North East India. Conserving large forest tracts and protected wildlife habitats provides an opportunity for restoring populations of wide-ranging wildlife such as tigers and elephants. Based on limited field observations coupled...

Do Welsh hill farmers dream of radioactive sheep?

International Nuclear Information System (INIS)

Roberts, Gwyn; Williams, Aled; Last, D.

1993-01-01

A low-power portable device is being used successfully in North Wales to provide precise position-logging of sheep grazing on upland hill pastures following irradiation by fallout from the Chernobyl reactor. This follows the discovery that radiation levels appear to vary significantly among sheep from the same flock, suggesting hot-spots of radiation. The design and execution of the system is described. (UK)

Antimicrobial activity of Davilla elliptica St. Hill (Dilleniaceae

Directory of Open Access Journals (Sweden)

D.C. Michelin

Full Text Available Davilla elliptica St. Hill ("lixinha", family Dilleniaceae, is commonly used in the Brazilian folk medicine as purgative and stimulant. This work evaluated the antimicrobial activity of the methanol and chloroform extracts of the leaves and barks of D. elliptica using the disc-diffusion method. The results obtained showed that the methanolic extracts of the leaves and barks presented antimicrobial activity against the tested microorganisms.

Optimal resampling for the noisy OneMax problem

OpenAIRE

Liu, Jialin; Fairbank, Michael; Pérez-Liébana, Diego; Lucas, Simon M.

2016-01-01

The OneMax problem is a standard benchmark optimisation problem for a binary search space. Recent work on applying a Bandit-Based Random Mutation Hill-Climbing algorithm to the noisy OneMax Problem showed that it is important to choose a good value for the resampling number to make a careful trade off between taking more samples in order to reduce noise, and taking fewer samples to reduce the total computational cost. This paper extends that observation, by deriving an analytical expression f...

Habitat selection of a declining white-tailed deer herd in the central Black Hills, South Dakota and Wyoming

Science.gov (United States)

Deperno, Christopher Shannon

Habitat selection, survival rates, the Black Hills National Forest Habitat Capability Model (HABCAP), and the USDA Forest Service Geographic Information System (GIS) data base were evaluated for a declining white-tailed deer (Odocoileus virginianus dacotensis) herd in the central Black Hills of South Dakota and Wyoming. From July 1993 through July 1996, 73 adult and yearling female and 12 adult and yearling male white-tailed deer were radiocollared and visually monitored. Habitat information was collected at 4,662 white-tailed deer locations and 1,087 random locations. Natural mortality (71%) was the primary cause of female mortality, followed by harvest (22.5%) and accidental causes (6.5%). More females died in spring (53.2%) than in fall (22.6%), winter (14.5%), or summer (9.7%). Male mortality resulted from hunting in fall (66.7%) and natural causes in spring (33.3%). Survival rates for all deer by year were 62.1% in 1993, 51.1% in 1994, 56.4% in 1995, and 53.9% in 1996 and were similar (P = 0.691) across years. During winter, white-tailed deer selected ponderosa pine- (Pinus ponderosa ) deciduous and burned pine cover types. Overstory-understory habitats selected included pine/grass-forb, pine/bearberry (Arctostaphylos uva-ursi), pine/snowberry (Symphoricarpos albus), burned pine/grass-forb, and pine/shrub habitats. Structural stages selected included sapling-pole pine stands with >70% canopy cover, burned pine sapling-pole and saw-timber stands with 40% canopy cover and all sapling-pole pine structural stages; sapling-pole stands with >70% canopy cover received the greatest use. White-tailed deer primarily fed in pine saw-timber structural stage with less than 40% canopy cover. Overall, selected habitats contained lower amounts of grass/forb, shrubs, and litter than random locations. Male and female deer generally bedded in areas that were characterized by greater horizontal cover than feeding and random sites. When feeding and bedding sites were combined

Some noteworthy distributional records from the Gwassi Hills area ...

African Journals Online (AJOL)

A preliminary inventory of birds occurring in the Gwassi Hills area was compiled by Bradley et .... Woodpecker by some), on the basis of a paler grey head and underparts, and the absence of .... Bay, 50 km to the northeast (Lewis & Pomeroy 1989, D. Turner pers. ... These birds appeared slightly darker with more slaty tones.

Geoheritage and geotourism potential of the Strzelin Hills (Sudetic Foreland, SW Poland

Directory of Open Access Journals (Sweden)

Solarska Anna

2010-01-01

Full Text Available The aim of this paper is to present a state of knowledge about geotourism potential of the Strzelin Hills. Still there is no geotouristic infrastructure in the Strzelin Hills that could make available all their advantages for educational purposes. There are being carried out works on inventory and documentation to create a base for a development of geotourism. The geotouristic potential is described on the basis of previously studied and valorized objects of geological and geomorphological heritage. There were inventoried 38 objects of geoheritage. During valorization of 17 geosites and geomorphosites were selected 8 represented objects, which present 10 from the 15 thematic groups. There were briefly described 6 of them in this paper. .

78 FR 35951 - Proposed Low-Effect Habitat Conservation Plan for the City of Santa Cruz Graham Hill Water...

Science.gov (United States)

2013-06-14

...] Proposed Low-Effect Habitat Conservation Plan for the City of Santa Cruz Graham Hill Water Treatment Plant... grasshopper (Trimerotropis infantilis), and will address associated impacts and conservation measures for the... lawful activities associated with the operation and maintenance of the existing Graham Hill Water...

Rainwater harvesting potential sites at margalla hills national park

International Nuclear Information System (INIS)

Khalid, B.; Mushtaq, N.; Sial, M.

2013-01-01

Life without water is not possible. Adoption of modern lifestyle and increase in population is leading to a water scarce world. The demand of world population cannot be met , which is resulting in increased groundwater abstraction. The world is facing water crisis and Pakistan is no exception. Urban areas of Pakistan are affected badly where extraction is higher while the construction of pavements has disturbed groundwater infiltration. The Federal Capital of Pakistan, Islamabad, is located in Pothohar region of the country and faces severe water shortages, particularly during summers. Extensive drilling by public and private users lowers groundwater table. Satellite imagery of LANDSAT 7 ETM+ and ASTER DEM 30m resolution were used to construct the site suitability map for groundwater recharge of Margalla Hills National Park. Factors considered included land cover, drainage density, elevation and slope. Suitable weight ages were assigned to these factors according to their influence on infiltration in the study area. Groundwater recharge at Margalla Hills National Park will be effective in dealing with water crisis in Islamabad as it will raise groundwater table of the adjacent areas. (author)

New SHRIMP zircon results from Broken Hill: towards robust stratigraphic and event timing

International Nuclear Information System (INIS)

Page, R.W.; Stevens, B.P.J.

1999-01-01

Full text: Zircon U-Pb SHRIMP geochronology is a powerful means of elucidating geological ages, providing that it is integrated with unequivocal field constraints, and providing that the fundamental assumptions which are behind any isotopic dating methods are geologically validated. In an attempt to better quantify the timing of Broken Hill's complex history and to reduce some current uncertainties, we report initial results from a new U-Pb SHRIMP investigation. This program was planned within the background of our own disparate stratigraphic and structural approaches to Broken Hill geology, and with objectives to (a) benchmark our new age results with those of previous workers as well as our own previous work in the Broken Hill Group, (b) evaluate and test the evidence for reported Archaean basement terrain, (c) date stratigraphic units in the upper parts of the Willyama Supergroup, (d) better constrain the timing of deformational events. Our U-Pb SHRIMP work on zircons from layered paragneisses in the Redan Geophysical Zone near Farmcote was catalysed by Nutman and Ehlers' (1998a) preferred interpretation that these 'strondhjemitic' gneisses represent an original ∼2650 Ma protolith. Our work finds zircon provenance age signatures typical of almost all ca. 1700 Ma metasediments, whether in the Broken Hill Block or other Australian Palaeoproterozoic settings. This therefore suggests that the rocks are not Archaean basement, but are part of a Thackaringa Group package possibly deposited about 1705-1710 Ma ago. New SHRIMP work on the Alma Gneiss provides a magmatic age of 1704±3 Ma, and a minimum stratigraphic age for host Thackaringa Group. This result is within error of our ages for other granitoids (1703±3 Ma, 1704±3 Ma) in the same stratigraphic position near Farmcote. As the Thackaringa Group is no more than 1000-1500 metres thick and includes 1710-1700 Ma detrital zircons, pan of the Alma Gneiss intrusion may well have been shallowly intruded, and akin to

Domain-restricted mutation analysis to identify novel driver events in human cancer

Directory of Open Access Journals (Sweden)

Sanket Desai

2017-10-01

Full Text Available Analysis of mutational spectra across various cancer types has given valuable insights into tumorigenesis. Different approaches have been used to identify novel drivers from the set of somatic mutations, including the methods which use sequence conservation, geometric localization and pathway information. Recent computational methods suggest use of protein domain information for analysis and understanding of the functional consequence of non-synonymous mutations. Similarly, evidence suggests recurrence at specific position in proteins is robust indicators of its functional impact. Building on this, we performed a systematic analysis of TCGA exome derived somatic mutations across 6089 PFAM domains and significantly mutated domains were identified using randomization approach. Multiple alignment of individual domain allowed us to prioritize for conserved residues mutated at analogous positions across different proteins in a statistically disciplined manner. In addition to the known frequently mutated genes, this analysis independently identifies low frequency Meprin and TRAF-Homology (MATH domain in Speckle Type BTB/POZ (SPOP protein, in prostate adenocarcinoma. Results from this analysis will help generate hypotheses about the downstream molecular mechanism resulting in cancer phenotypes.

The somatic mutation landscape of premalignant colorectal adenoma.

Science.gov (United States)

Lin, Shu-Hong; Raju, Gottumukkala S; Huff, Chad; Ye, Yuanqing; Gu, Jian; Chen, Jiun-Sheng; Hildebrandt, Michelle A T; Liang, Han; Menter, David G; Morris, Jeffery; Hawk, Ernest; Stroehlein, John R; Futreal, Andrew; Kopetz, Scott; Mishra, Lopa; Wu, Xifeng

2017-06-12

There are few studies which characterised the molecular alterations in premalignant colorectal adenomas. Our major goal was to establish colorectal adenoma genome atlas and identify molecular markers of progression from colorectal adenoma to adenocarcinoma. Whole-exome sequencing and targeted sequencing were carried out in 149 adenoma samples and paired blood from patients with conventional adenoma or sessile serrated adenoma to characterise the somatic mutation landscape for premalignant colorectal lesions. The identified somatic mutations were compared with those in colorectal cancer (CRC) samples from The Cancer Genome Atlas. A supervised random forest model was employed to identify gene panels differentiating adenoma from CRC. Similar somatic mutation frequencies, but distinctive driver mutations, were observed in sessile serrated adenomas and conventional adenomas. The final model included 20 genes and was able to separate the somatic mutation profile of colorectal adenoma and adenocarcinoma with an area under the curve of 0.941. The findings of this project hold potential to better identify patients with adenoma who may be candidates for targeted surveillance programmes and preventive interventions to reduce the incidence of CRC. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

The Lister Hill National Center for Biomedical Communications.

Science.gov (United States)

Smith, K A

1994-09-01

On August 3, 1968, the Joint Resolution of the Congress established the program and construction of the Lister Hill National Center for Biomedical Communications. The facility dedicated in 1980 contains the latest in computer and communications technologies. The history, program requirements, construction management, and general planning are discussed including technical issues regarding cabling, systems functions, heating, ventilation, and air conditioning system (HVAC), fire suppression, research and development laboratories, among others.

Optimizing hill seeding density for high-yielding hybrid rice in a single rice cropping system in South China.

Directory of Open Access Journals (Sweden)

Danying Wang

Full Text Available Mechanical hill direct seeding of hybrid rice could be the way to solve the problems of high seeding rates and uneven plant establishment now faced in direct seeded rice; however, it is not clear what the optimum hill seeding density should be for high-yielding hybrid rice in the single-season rice production system. Experiments were conducted in 2010 and 2011 to determine the effects of hill seeding density (25 cm×15 cm, 25 cm×17 cm, 25 cm×19 cm, 25 cm×21 cm, and 25 cm×23 cm; three to five seeds per hill on plant growth and grain yield of a hybrid variety, Nei2you6, in two fields with different fertility (soil fertility 1 and 2. In addition, in 2012 and 2013, comparisons among mechanical hill seeding, broadcasting, and transplanting were conducted with three hybrid varieties to evaluate the optimum seeding density. With increases in seeding spacing from 25 cm×15 cm to 25 cm×23 cm, productive tillers per hill increased by 34.2% and 50.0% in soil fertility 1 and 2. Panicles per m2 declined with increases in seeding spacing in soil fertility 1. In soil fertility 2, no difference in panicles per m2 was found at spacing ranging from 25 cm×17 cm to 25 cm×23 cm, while decreases in the area of the top three leaves and aboveground dry weight per shoot at flowering were observed. Grain yield was the maximum at 25 cm×17 cm spacing in both soil fertility fields. Our results suggest that a seeding density of 25 cm×17 cm was suitable for high-yielding hybrid rice. These results were verified through on-farm demonstration experiments, in which mechanical hill-seeded rice at this density had equal or higher grain yield than transplanted rice.

Eocene age of the Baranowski Glacier Group at Red Hill, King George Island, West Antarctica

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Mozer Anna

2015-12-01

Full Text Available Radiometric and geochemical studies were carried out at Red Hill in the southern part of King George Island (South Shetland Islands, northern Antarctic Peninsula on the Bransfield Strait coast. The rock succession at Red Hill has been determined to represent the Baranowski Glacier Group that was previously assigned a Late Cretaceous age. Two formations were distinguished within this succession: the lower Llano Point Formation and the upper Zamek Formation. These formations have stratotypes defined further to the north on the western coast of Admiralty Bay. On Red Hill the Llano Point Formation consists of terrestrial lavas and pyroclastic breccia; the Zamek Formation consist predominantly of fine to coarse tuff, pyroclastic breccia, lavas, tuffaceous mud-, silt-, and sandstone, locally conglomeratic. The lower part of the Zamek Formation contains plant detritus (Nothofagus, dicotyledonous, thermophilous ferns and numerous coal seams (vitrinitic composition that confirm the abundance of vegetation on stratovolcanic slopes and surrounding lowlands at that time. Selected basic to intermediate igneous rocks from the succession have been analysed for the whole-rock K-Ar age determination. The obtained results indicate that the Red Hill succession was formed in two stages: (1 from about 51–50 Ma; and (2 46–42 Ma, i.e. during the Early to Middle Eocene. This, in combination with other data obtained from other Baranowski Glacier Group exposures on western coast of Admiralty Bay, confirms the recently defined position of the volcano-clastic succession in the stratigraphic scheme of King George Island. The new stratigraphic position and lithofacies development of the Red Hill succession strongly suggest its correlation with other Eocene formations containing fossil plants and coal seams that commonly occur on King George Island.

Generation of terrestrial radiation database in the Larsemann Hills, Antarctica

International Nuclear Information System (INIS)

Pal, Rupali; Dhabekar, Bhushan; Jose, Jis Romal; Chinnaesakki, S.; Bakshi, A.K.; Datta, D.; Pradeepkumar, K.S.

2018-01-01

Natural background radiation in the environment includes terrestrial radiation, cosmic radiation from space and air activity due to radon/thoron. It is known that cosmic contribution increases near the poles. The terrestrial component is largely due to 232 Th and 238 U series and 40 K. BARC under the cosmic ray dosimetry project with National Centre for Antarctic and Ocean Research (NCAOR) has taken up measurement of natural background radiation at Larsemann Hills, Antarctica. The project includes generation of baseline data on terrestrial radioactivity in water, soil and rock and estimation of cosmic ray doses. Extensive radiation surveys were carried out by the BARC team in the 35 th and 36 th expedition in and around Larsemann hills in East Antarctica where the third Indian station 'Bharati' is situated. This paper presents mapping of terrestrial radiation levels in Antarctica which will help in strengthening the background radiation database and develop a Radiation Informatics System (RIS)

Age and paragenesis of mineralisation at Coronation Hill uranium deposit, Northern Territory, Australia

Science.gov (United States)

Orth, Karin; Meffre, Sebastien; Davidson, Garry

2014-06-01

Coronation Hill is a U + Au + platinum group elements deposit in the South Alligator Valley (SAV) field in northern Australia, south of the better known unconformity-style U East Alligator Rivers (EAR) field. The SAV field differs from the EAR by having a more complex basin-basement architecture. A volcanically active fault trough (Jawoyn Sub-basin) developed on older basement and then was disrupted by renewed faulting, before being buried beneath regional McArthur Basin sandstones that are also the main hanging wall to the EAR deposits. Primary mineralisation at Coronation Hill formed at 1607 ± 26 Ma (rather than 600-900 Ma as previously thought), and so it is likely that the SAV was part of a single west McArthur Basin dilational event. Most ore is hosted in sub-vertical faults and breccias in the competent volcanic cover sequence. This favoured fluid mixing, acid buffering (forming illite) and oxidation of Fe2+ and reduced C-rich assemblages as important uranium depositional mechanisms. However, reduction of U in fractured older pyrite (Pb model age of 1833 ± 67 Ma) is an important trap in diorite. Some primary ore was remobilised at 675 ± 21 Ma to form coarse uraninite + Ni-Co pyrite networks containing radiogenic Pb. Coronation Hill is polymetallic, and in this respect resembles the `egress'-style U deposits in the Athabascan Basin (Canada). However, these are all cover-hosted. A hypothesis for further testing is that Coronation Hill is also egress-style, with ores formed by fluids rising through basement-hosted fault networks (U reduction by diorite pyrite and carbonaceous shale), and into veins and breccias in the overlying Jawoyn Sub-basin volcano-sedimentary succession.

Development and Validation of a Tool for Measurement of Patient Satisfaction with Nursing Care at Oak Hill Hospital.

Science.gov (United States)

Callow, Elizabeth K.

The Department of Nursing at Oak Hill Hospital, Spring Hill (Florida) did not have a measurement instrument for patient evaluation of hospital nursing services. An instrument to measure patient satisfaction with nursing was developed and validated. Criteria identified through a literature search were reviewed, modified, and validated by a…

Quasi-stationary distributions for structured birth and death processes with mutations

OpenAIRE

Collet , Pierre; Martinez , Servet; Méléard , Sylvie; San Martin , Jaime

2009-01-01

39 pages; We study the probabilistic evolution of a birth and death continuous time measure-valued process with mutations and ecological interactions. The individuals are characterized by (phenotypic) traits that take values in a compact metric space. Each individual can die or generate a new individual. The birth and death rates may depend on the environment through the action of the whole population. The offspring can have the same trait or can mutate to a randomly distributed trait. We ass...

Development of potent in vivo mutagenesis plasmids with broad mutational spectra.

Science.gov (United States)

Badran, Ahmed H; Liu, David R

2015-10-07

Methods to enhance random mutagenesis in cells offer advantages over in vitro mutagenesis, but current in vivo methods suffer from a lack of control, genomic instability, low efficiency and narrow mutational spectra. Using a mechanism-driven approach, we created a potent, inducible, broad-spectrum and vector-based mutagenesis system in E. coli that enhances mutation 322,000-fold over basal levels, surpassing the mutational efficiency and spectra of widely used in vivo and in vitro methods. We demonstrate that this system can be used to evolve antibiotic resistance in wild-type E. coli in mutagenesis of chromosomes, episomes and viruses in vivo, and are applicable to both bacterial and bacteriophage-mediated laboratory evolution platforms.

Galileo's 'Jumping-Hill' Experiment in the Classroom--A Constructivist's Analysis.

Science.gov (United States)

Kubli, Fritz

2001-01-01

Uses Galileo's 'jumping-hill' experiment as an historical element to improve science teaching in the classroom. Illustrates that the experiment can stimulate an animated discussion in the classroom, even if precise historic circumstances are not mentioned. The historical dimensions bring some color into the lesson, which increases attention. (SAH)

Evolution of complex dynamics

Science.gov (United States)

Wilds, Roy; Kauffman, Stuart A.; Glass, Leon

2008-09-01

We study the evolution of complex dynamics in a model of a genetic regulatory network. The fitness is associated with the topological entropy in a class of piecewise linear equations, and the mutations are associated with changes in the logical structure of the network. We compare hill climbing evolution, in which only mutations that increase the fitness are allowed, with neutral evolution, in which mutations that leave the fitness unchanged are allowed. The simple structure of the fitness landscape enables us to estimate analytically the rates of hill climbing and neutral evolution. In this model, allowing neutral mutations accelerates the rate of evolutionary advancement for low mutation frequencies. These results are applicable to evolution in natural and technological systems.

Around the Bend: The Curious Power of the Hills around Queenstown, Tasmania

Directory of Open Access Journals (Sweden)

Emily Bullock

2012-03-01

Full Text Available This article traces a concern with excess and waste, landscape and identity in a town on the western periphery of Tasmania.  Queenstown’s bald hills have been a popular tourist drawcard since the turn of the century, sold in travel guides and brochures as a spectacular ‘moonscape’. A combination of a severe bushfire in 1896 and the emission of sulphurous gases from the pyritic smelting process at the Mt Lyell Copper Mine have resulted in Queenstown’s weird denuded landscape. But the locals have grown attached to the hills and want to preserve their baldness.  Here, the impulse to preserve a grotesque landscape registers a culture surviving on desecration to stave off its own disappearance.

Prevalence of Dermatoses in Tribal Population of Kalrayan Hill (South Arcot District

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C Mahalingam

1986-01-01

Full Text Available A sample survey was conducted to find out the prevalence of dermatoses among the tribal population of Kalrayan hill in South Arcot district who were recently found out .from the hidden spots of the hill. The prevalence of dermatoses was 40% among the 242 screened. Scabies had a prevalence of 22.7% and was more among the tribal s chool children put in huts, emphasizing the need for adequate shelter and health education. The low frequency of nutritional dermatoses 3.7% is attributed to the implementation of the noon-meal scheme. Surprising low prevalence rate for leprosy (1.7% in this highly endemic district of South Arcot needs further probing to find out some clues for protection from leprosy.

Mosquito diversity in Keeriparai and Mundanthurai hill ranges of the Western Ghats, southern India

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A. Munirathinam

2015-07-01

Full Text Available After a gap of 25 years the Centre for Research in Medical Entomology (CRME surveyed the mosquito biodiversity in the tail-end hill ranges of the Western Ghats, viz., Kanyakumari (Keeriparai and Tirunelveli districts (Kalakkad-Mundanthurai Tiger Reserve (KMTR and Courtallam of Tamil Nadu between July 2010 and June 2013.  The altitude of the hills ranged from 100–950 m covered by evergreen forests.  A major emphasis was given to collect the immature stages of mosquitoes, from various breeding habitats, viz., slow flowing streams, spring pool, rocky pool, leaf axils, latex cup, tree hole, bamboo stumps, etc.  Altogether 4602 immature individuals were collected, reared individually to be identified at the adult stage.  A total of 3583 specimens belonging to 50 species classified under 21 genera and 18 subgenera were recorded.  The major vector species found in these hill ranges were Stegomyia aegypti, S. albopicta (Dengue and Chikungunya, Culex bitaeniorhynchus, C. tritaeniorhynchus (Japanese encephalitis, Downsiomyia nivea (diurnally subperiodic filariasis and Anopheles mirans (Simian malaria vectors were recorded. 

The Goodwin model: behind the Hill function.

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Didier Gonze

Full Text Available The Goodwin model is a 3-variable model demonstrating the emergence of oscillations in a delayed negative feedback-based system at the molecular level. This prototypical model and its variants have been commonly used to model circadian and other genetic oscillators in biology. The only source of non-linearity in this model is a Hill function, characterizing the repression process. It was mathematically shown that to obtain limit-cycle oscillations, the Hill coefficient must be larger than 8, a value often considered unrealistic. It is indeed difficult to explain such a high coefficient with simple cooperative dynamics. We present here molecular models of the standard Goodwin model, based on single or multisite phosphorylation/dephosphorylation processes of a transcription factor, which have been previously shown to generate switch-like responses. We show that when the phosphorylation/dephosphorylation processes are fast enough, the limit-cycle obtained with a multisite phosphorylation-based mechanism is in very good quantitative agreement with the oscillations observed in the Goodwin model. Conditions in which the detailed mechanism is well approximated by the Goodwin model are given. A variant of the Goodwin model which displays sharp thresholds and relaxation oscillations is also explained by a double phosphorylation/dephosphorylation-based mechanism through a bistable behavior. These results not only provide rational support for the Goodwin model but also highlight the crucial role of the speed of post-translational processes, whose response curve are usually established at a steady state, in biochemical oscillators.

Effects of forage types on digestibility, methane emissions, and nitrogen utilization efficiency in two genotypes of hill ewes.

Science.gov (United States)

Zhao, Y G; Annett, R; Yan, T

2017-08-01

Thirty-six nonpregnant hill ewes (18 pure Scottish Blackface and 18 Swaledale × Scottish Blackface) aged 18 mo and weighing 48 ± 4.8 kg were allocated to 3 forage treatments balanced for genotype and BW. Each genotype was offered 3 forages (pelleted ryegrass, fresh lowland grass, and fresh hill grass) ad libitum with 6 ewes for each of the 6 genotype × diet combination treatments. Pelleted ryegrass was sourced from a commercial supplier (Drygrass South Western Ltd, Burrington, UK). Fresh lowland grass was harvested daily in the morning from a third regrowth perennial ryegrass () sward. Fresh hill grass was harvested from a seminatural hill grassland every 2 d and stored in plastic bags at 4 to 5°C until offered. The animals were individually housed in pens and offered experimental diets for 14 d before being transferred to 6 individual respiration chambers for a further 4 d, during which feed intake, fecal and urine outputs, and CH emissions were measured. There was no interaction between genotype and forage types on any variable measured. In a comparison of effects of the 3 forages, pelleted ryegrass had the greatest ( reduce CH emissions per kilogram DMI. These equations add new information in predicting enteric CH emissions and N utilization efficiency and can be used to quantify the environmental footprint of hill sheep production systems.

Evolving Game Skill-Depth using General Video Game AI Agents

OpenAIRE

Liu, Jialin; Togelius, Julian; Perez-Liebana, Diego; Lucas, Simon M.

2017-01-01

Most games have, or can be generalised to have, a number of parameters that may be varied in order to provide instances of games that lead to very different player experiences. The space of possible parameter settings can be seen as a search space, and we can therefore use a Random Mutation Hill Climbing algorithm or other search methods to find the parameter settings that induce the best games. One of the hardest parts of this approach is defining a suitable fitness function. In this paper w...

Eagle Hill, Kenya: changes over 60 years | Thomsett | Scopus ...

African Journals Online (AJOL)

Eagle Hill, the study site of the late Leslie Brown, was first surveyed over 60 years ago in 1948. The demise of its eagle population was near-complete less than 50 years later, but significantly, the majority of these losses occurred in the space of a few years in the late 1970s. Unfortunately, human densities and land use ...

Systematic studies of Bornean Zingiberaceae V. Zingiberoideae of Lambir Hills, Sarawak

NARCIS (Netherlands)

Sakai, S.; Nagamasu, H.

2006-01-01

This paper reports the subfamily Zingiberoideae (Zingiberaceae) of Lambir Hills National Park, Sarawak, Malaysia. Twelve species representing Boesenbergia, Globba, and Zingiber are recorded. Systematic and ecological notes are provided, and the key to the Bornean species of Boesenbergia is updated.

Establishment of Eucalyptus grandis W. Hill ex Maiden in vitro using ...

African Journals Online (AJOL)

Establishment of Eucalyptus grandis W. Hill ex Maiden in vitro using commercial products for seed treatment. Moacir Ribeiro Neto, Cíntia de Oliveira Martendal, Flávia Dionísio Pereira, Edson Luiz Souchie, Fabiano Guimarães Silva ...

The Effect of the Cherry Hill Study Skills Program on Eighth Grade Students' Reading Comprehension and Study Skills.

Science.gov (United States)

La Marca, Marilyn Tierney

A study was conducted to determine the effects of the "Cherry Hill Study Skills Program" on eighth grade students' reading comprehension and study skills. The "Cherry Hill Study Skills Program" is a process oriented course dealing with the sequential development of nine specific skills deemed essential to the retrieval and retention of information…

Site-specific genomic (SSG and random domain-localized (RDL mutagenesis in yeast

Directory of Open Access Journals (Sweden)

Honigberg Saul M

2004-04-01

Full Text Available Abstract Background A valuable weapon in the arsenal available to yeast geneticists is the ability to introduce specific mutations into yeast genome. In particular, methods have been developed to introduce deletions into the yeast genome using PCR fragments. These methods are highly efficient because they do not require cloning in plasmids. Results We have modified the existing method for introducing deletions in the yeast (S. cerevisiae genome using PCR fragments in order to target point mutations to this genome. We describe two PCR-based methods for directing point mutations into the yeast genome such that the final product contains no other disruptions. In the first method, site-specific genomic (SSG mutagenesis, a specific point mutation is targeted into the genome. In the second method, random domain-localized (RDL mutagenesis, a mutation is introduced at random within a specific domain of a gene. Both methods require two sequential transformations, the first transformation integrates the URA3 marker into the targeted locus, and the second transformation replaces URA3 with a PCR fragment containing one or a few mutations. This PCR fragment is synthesized using a primer containing a mutation (SSG mutagenesis or is synthesized by error-prone PCR (RDL mutagenesis. In SSG mutagenesis, mutations that are proximal to the URA3 site are incorporated at higher frequencies than distal mutations, however mutations can be introduced efficiently at distances of at least 500 bp from the URA3 insertion. In RDL mutagenesis, to ensure that incorporation of mutations occurs at approximately equal frequencies throughout the targeted region, this region is deleted at the same time URA3 is integrated. Conclusion SSG and RDL mutagenesis allow point mutations to be easily and efficiently incorporated into the yeast genome without disrupting the native locus.

Volcano-tectonic interaction at Soufriere Hills volcano, Montserrat (W.I.), constrained by dynamic gravity data

International Nuclear Information System (INIS)

Hautmann, Stefanie; Gottsmann, Joachim; Sparks, R Stephen J; Camacho, Antonio; Fournier, Nicolas

2008-01-01

We report on a joint gravimetric and ground deformation study on Montserrat, with the aim of quantifying mass and/or density changes beneath the island related to the volcanic activity at Soufrire Hills Volcano (SHV). Our observations coupled with 3-D data inversion indicate the existence of a previously unrecognised NNW-SSE trending zone of structural weakness (i.e. fault) that is located at shallow depths beneath the Centre Hills of Montserrat, along which active fluid migration is coupled to magmatic stressing at SHV.

Volcano-tectonic interaction at Soufriere Hills volcano, Montserrat (W.I.), constrained by dynamic gravity data

Energy Technology Data Exchange (ETDEWEB)

Hautmann, Stefanie; Gottsmann, Joachim; Sparks, R Stephen J [Department of Earth Sciences, University of Bristol, Wills Memorial Building, Queens Road, Bristol BS8 1RJ (United Kingdom); Camacho, Antonio [Instituto de AstronomIa y Geodesia (CSIC-UCM), Facultad CC Matematicas, Universidad Complutense Madrid, 28040 Madrid (Spain); Fournier, Nicolas [Seismic Research Unit, University of the West Indies, St Augustine (Trinidad and Tobago)], E-mail: stefanie.hautmann@googlemail.com

2008-10-01

We report on a joint gravimetric and ground deformation study on Montserrat, with the aim of quantifying mass and/or density changes beneath the island related to the volcanic activity at Soufrire Hills Volcano (SHV). Our observations coupled with 3-D data inversion indicate the existence of a previously unrecognised NNW-SSE trending zone of structural weakness (i.e. fault) that is located at shallow depths beneath the Centre Hills of Montserrat, along which active fluid migration is coupled to magmatic stressing at SHV.

Turbulence Models: Data from Other Experiments: FAITH Hill 3-D Separated Flow

Data.gov (United States)

National Aeronautics and Space Administration — Exp: FAITH Hill 3-D Separated Flow. This web page provides data from experiments that may be useful for the validation of turbulence models. This resource is...

The Changing Colors of Maple Hills: Intersections of Culture, Race, Language, and Exceptionality in a Rural Farming Community

Science.gov (United States)

Scanlan, Martin

2016-01-01

This case describes Maple Hills Elementary, a K-8 school in a rural farming community of the Midwest. As a community, Maple Hills has historically experienced a narrow range of diversity across race, ethnicity, language, and religion. Residents have predominantly been White, with German and English heritage, speak English as a mother tongue, and…

Geochemistry of PGE in mafic rocks of east Khasi Hills, Shillong ...

Indian Academy of Sciences (India)

study area. The studied mafic rocks of east Khasi Hills cover an area of about 4 km2 and represent .... In contrast to the global scenario, attempts for ..... chemical. Sp. no. structural mo de. Mineral comp o sition classification. M g#*. (wt%). (wt%).

Geoffrey Hill as Lord of Limit: the Kenosis as a Theological Context of his Poetry and Thought Note sur la kénose dans la poésie et la pensée de Geoffrey Hill

Directory of Open Access Journals (Sweden)

Adrian Grafe

2009-05-01

Full Text Available L’hymne kénotique pré-paulinienne (cf l’épître aux Philippiens, 2: 5-11 est un contexte pertinent pour situer la poésie et la poétique de Hill. Et la poésie et la prose de Hill montrent qu’il réfléchit sur cette notion (la kénose depuis au moins les sonnets de « Lachrimae » (1978 ; en passant par le titre et certains aspects du contenu de l’ouvrage critique The Lords of Limit (1984, ainsi que par l’appendice rédigé pour Christ : The Self-Emptying of God (1997 de Lucien Richard, jusqu’à The Triumph of Love (1998 et au-delà. Dans l’appendice de l’ouvrage de Richard, Hill évoque la « poésie kénotique » de Herbert, qui marie la maîtrise (la dimension seigneuriale et l’humilité (l’aspect limité. Dans la mesure où le terme « kénotique » est théologique, cette remarque sous-tend la lecture poético-théologique de l’œuvre de Hill lui-même qui est ici proposée sous une forme brève comme son titre l’indique.

Diagenetic Features Analyzed by ChemCam/Curiosity at Pahrump Hills, Gale Crater, Mars

Science.gov (United States)

Nachon, M.; Mangold, N.; Cousin, A.; Forni, O.; Anderson, R. B.; Blank, J. G.; Calef, F.; Clegg, S.; Fabre, C.; Fisk, M.;

A novel mutation in CLCN1 associated with feline myotonia congenita.

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Barbara Gandolfi

Full Text Available Myotonia congenita (MC is a skeletal muscle channelopathy characterized by inability of the muscle to relax following voluntary contraction. Worldwide population prevalence in humans is 1:100,000. Studies in mice, dogs, humans and goats confirmed myotonia associated with functional defects in chloride channels and mutations in a skeletal muscle chloride channel (CLCN1. CLCN1 encodes for the most abundant chloride channel in the skeletal muscle cell membrane. Five random bred cats from Winnipeg, Canada with MC were examined. All cats had a protruding tongue, limited range of jaw motion and drooling with prominent neck and proximal limb musculature. All cats had blepharospasm upon palpebral reflex testing and a short-strided gait. Electromyograms demonstrated myotonic discharges at a mean frequency of 300 Hz resembling the sound of a 'swarm of bees'. Muscle histopathology showed hypertrophy of all fiber types. Direct sequencing of CLCN1 revealed a mutation disrupting a donor splice site downstream of exon 16 in only the affected cats. In vitro translation of the mutated protein predicted a premature truncation and partial lack of the highly conserved CBS1 (cystathionine β-synthase domain critical for ion transport activity and one dimerization domain pivotal in channel formation. Genetic screening of the Winnipeg random bred population of the cats' origin identified carriers of the mutation. A genetic test for population screening is now available and carrier cats from the feral population can be identified.

Magnetotelluric investigation of the Vestfold Hills and Rauer Group, East Antarctica

Science.gov (United States)

Peacock, Jared R.; Selway, Katherine

2016-01-01

The Vestfold Hills and Rauer Group in East Antarctica have contrasting Archean to Neoproterozoic geological histories and are believed to be juxtaposed along a suture zone that now lies beneath the Sørsdal Glacier. Exact location and age of this suture zone are unknown, as is its relationship to regional deformation associated with the amalgamation of East Gondwana. To image the suture zone, magnetotelluric (MT) data were collected in Prydz Bay, East Antarctica, mainly along a profile crossing the Sørsdal Glacier and regions inland of the Vestfold Hills and Rauer Group islands. Time-frequency analysis of the MT time series yielded three important observations: (1) Wind speeds in excess of ∼8 m/s reduce coherence between electric and magnetic fields due to charged wind-blown particles of ice and snow. (2) Estimation of the MT transfer function is best between 1000 and 1400 UT when ionospheric Hall currents enhance the magnetic source field. (3) Nonplanar source field effects were minimal but detectable and removed from estimation of the MT transfer function. Inversions of MT data in 2-D and 3-D produce similar resistivity models, where structures in the preferred 3-D resistivity model correlate strongly with regional magnetic data. The electrically conductive Rauer Group is separated from the less conductive Vestfold Hills by a resistive zone under the Sørsdal Glacier, which is interpreted to be caused by oxidation during suturing. Though a suture zone has been imaged, no time constrains on suturing can be made from the MT data.

Differential evolution enhanced with multiobjective sorting-based mutation operators.

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Wang, Jiahai; Liao, Jianjun; Zhou, Ying; Cai, Yiqiao

2014-12-01

Differential evolution (DE) is a simple and powerful population-based evolutionary algorithm. The salient feature of DE lies in its mutation mechanism. Generally, the parents in the mutation operator of DE are randomly selected from the population. Hence, all vectors are equally likely to be selected as parents without selective pressure at all. Additionally, the diversity information is always ignored. In order to fully exploit the fitness and diversity information of the population, this paper presents a DE framework with multiobjective sorting-based mutation operator. In the proposed mutation operator, individuals in the current population are firstly sorted according to their fitness and diversity contribution by nondominated sorting. Then parents in the mutation operators are proportionally selected according to their rankings based on fitness and diversity, thus, the promising individuals with better fitness and diversity have more opportunity to be selected as parents. Since fitness and diversity information is simultaneously considered for parent selection, a good balance between exploration and exploitation can be achieved. The proposed operator is applied to original DE algorithms, as well as several advanced DE variants. Experimental results on 48 benchmark functions and 12 real-world application problems show that the proposed operator is an effective approach to enhance the performance of most DE algorithms studied.

Neighborhood properties are important determinants of temperature sensitive mutations.

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Svetlana Lockwood

Full Text Available Temperature-sensitive (TS mutants are powerful tools to study gene function in vivo. These mutants exhibit wild-type activity at permissive temperatures and reduced activity at restrictive temperatures. Although random mutagenesis can be used to generate TS mutants, the procedure is laborious and unfeasible in multicellular organisms. Further, the underlying molecular mechanisms of the TS phenotype are poorly understood. To elucidate TS mechanisms, we used a machine learning method-logistic regression-to investigate a large number of sequence and structure features. We developed and tested 133 features, describing properties of either the mutation site or the mutation site neighborhood. We defined three types of neighborhood using sequence distance, Euclidean distance, and topological distance. We discovered that neighborhood features outperformed mutation site features in predicting TS mutations. The most predictive features suggest that TS mutations tend to occur at buried and rigid residues, and are located at conserved protein domains. The environment of a buried residue often determines the overall structural stability of a protein, thus may lead to reversible activity change upon temperature switch. We developed TS prediction models based on logistic regression and the Lasso regularized procedure. Through a ten-fold cross-validation, we obtained the area under the curve of 0.91 for the model using both sequence and structure features. Testing on independent datasets suggested that the model predicted TS mutations with a 50% precision. In summary, our study elucidated the molecular basis of TS mutants and suggested the importance of neighborhood properties in determining TS mutations. We further developed models to predict TS mutations derived from single amino acid substitutions. In this way, TS mutants can be efficiently obtained through experimentally introducing the predicted mutations.

First report of Eutropis innovate (Blanford, 1870 (Reptilia: Scincidae from Nallamalai Hills, Andhra Pradesh, India

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K.T. Rao

2010-01-01

Full Text Available We report the first record of Eutropis innotata (Blanford, 1870 based on a specimen collected in 2002 from Gundla Brahmeswaram Metta Wildlife Sanctuary, Andhra Pradesh, India. The habitat from where it was collected is relatively undisturbed patch of forest in the Nallamalai Hills of Eastern Ghats. This constitutes the range extension of this species from central India to Nallamalai Hills in Eastern Ghats in peninsular India. We provide details on its diagnosis, habits and habitat, and key to species belonging to the genus Eutropis Fitzinger, 1843.

Characteristics, causes and evolutionary consequences of male-biased mutation.

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Ellegren, Hans

2007-01-07

Mutation has traditionally been considered a random process, but this paradigm is challenged by recent evidence of divergence rate heterogeneity in different genomic regions. One facet of mutation rate variation is the propensity for genetic change to correlate with the number of germ cell divisions, reflecting the replication-dependent origin of many mutations. Haldane was the first to connect this association of replication and mutation to the difference in the number of cell divisions in oogenesis (low) and spermatogenesis (usually high), and the resulting sex difference in the rate of mutation. The concept of male-biased mutation has been thoroughly analysed in recent years using an evolutionary approach, in which sequence divergence of autosomes and/or sex chromosomes are compared to allow inference about the relative contribution of mothers and fathers in the accumulation of mutations. For instance, assuming that a neutral sequence is analysed, that rate heterogeneity owing to other factors is cancelled out by the investigation of many loci and that the effect of ancestral polymorphism is properly taken into account, the male-to-female mutation rate ratio, alpham, can be solved from the observed difference in rate of X and Y chromosome divergence. The male mutation bias is positively correlated with the relative excess of cell divisions in the male compared to the female germ line, as evidenced by a generation time effect: in mammals, alpham is estimated at approximately 4-6 in primates, approximately 3 in carnivores and approximately 2 in small rodents. Another life-history correlate is sexual selection: when there is intense sperm competition among males, increased sperm production will be associated with a larger number of mitotic cell divisions in spermatogenesis and hence an increase in alpham. Male-biased mutation has implications for important aspects of evolutionary biology such as mate choice in relation to mutation load, sexual selection and the

Woods and Russell, Hill, and the emergence of medical statistics.

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Farewell, Vern; Johnson, Tony

2010-06-30

In 1937, Austin Bradford Hill wrote Principles of Medical Statistics (Lancet: London, 1937) that became renowned throughout the world and is widely associated with the birth of modern medical statistics. Some 6 years earlier Hilda Mary Woods and William Thomas Russell, colleagues of Hill at the London School of Hygiene and Tropical Medicine, wrote a similar book An Introduction to Medical Statistics (PS King and Son: London, 1931) that is little known today. We trace the origins of these two books from the foundations of early demography and vital statistics, and make a detailed examination of some of their chapters. It is clear that these texts mark a watershed in the history of medical statistics that demarcates the vital statistics of the nineteenth and early twentieth centuries from the modern discipline. Moreover, we consider that the book by Woods and Russell is of some importance in the development of medical statistics and we describe and acknowledge their place in the history of this discipline. (c) 2010 John Wiley & Sons, Ltd.

Landscape changes and natural hazards affecting the Pincio hill (Rome, Italy) in historical times

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Guarino, Paolo Maria; Lucarini, Mauro; Spizzichino, Daniele

2016-04-01

This work focuses on preliminary results achieved by means of a research project carried out by ISPRA in collaboration with Soprintendenza Capitolina (the Cultural Heritage Capitoline Superintendence), aimed at defining an interpretative model of natural and anthropic evolution of the Pincio Hill (Rome, Italy) during the last 2,500 years. The study area is located in the NE sector of the city of Rome and includes the Pincio hill Cultural Heritage site and the surrounding area of the Tiber River flood plain. The Pincio Hill is a very interesting case of interplay among: i) natural landscape setting; ii) historical urban transformations; iii) human activity and recurrence of natural hazard events impacting heavily on the territory since ancient times. During the last decades, designs of new areas to be allocated for underground parking jointly with new archaeological excavations surveys have allowed the acquisition of a large amount of new data. The study has been carried out through a new reinterpretation of recently drilled boreholes stratigraphic logs and the conspicuous related archaeological literature. The main outcome of the research activities are summarized as below. Concerning the top of the hill, latest archaeological excavations brought to the light traces of ancient structures and settlements dating from the Archaic period until the fourth century AD, highlighting the facto the character of strong agricultural and landscape appeal that have involved the western sector of the Pincio hill since the ancient times, without evidence of relevant alterations of the original landscape. In the slope sector, the information coming from geotechnical survey allowed the reconstruction of isochronous surfaces inside of landfills, divided according to their age. The profile of the slope below the landfill from the Roman period seems very steep and irregular, in strong contrast to the medieval one and the current one, characterized by multiple succession of terraces. In

Ash and Steam, Soufriere Hills Volcano, Monserrat

Science.gov (United States)

2002-01-01

International Space Station crew members are regularly alerted to dynamic events on the Earth's surface. On request from scientists on the ground, the ISS crew observed and recorded activity from the summit of Soufriere Hills on March 20, 2002. These two images provide a context view of the island (bottom) and a detailed view of the summit plume (top). When the images were taken, the eastern side of the summit region experienced continued lava growth, and reports posted on the Smithsonian Institution's Weekly Volcanic Activity Report indicate that 'large (50-70 m high), fast-growing, spines developed on the dome's summit. These spines periodically collapsed, producing pyroclastic flows down the volcano's east flank that sometimes reached the Tar River fan. Small ash clouds produced from these events reached roughly 1 km above the volcano and drifted westward over Plymouth and Richmond Hill. Ash predominately fell into the sea. Sulfur dioxide emission rates remained high. Theodolite measurements of the dome taken on March 20 yielded a dome height of 1,039 m.' Other photographs by astronauts of Montserrat have been posted on the Earth Observatory: digital photograph number ISS002-E-9309, taken on July 9, 2001; and a recolored and reprojected version of the same image. Digital photograph numbers ISS004-E-8972 and 8973 were taken 20 March, 2002 from Space Station Alpha and were provided by the Earth Sciences and Image Analysis Laboratory at Johnson Space Center. Additional images taken by astronauts and cosmonauts can be viewed at the NASA-JSC Gateway to Astronaut Photography of Earth.

Direct Measurements of Human Colon Crypt Stem Cell Niche Genetic Fidelity: The Role of Chance in Non-Darwinian Mutation Selection

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Haeyoun eKang

2013-10-01

Full Text Available Perfect human stem cell genetic fidelity would prevent aging and cancer. However, perfection would be difficult to achieve, and aging is universal and cancers common. A hypothesis is that because mutations are inevitable over a human lifetime, downstream mechanisms have evolved to manage the deleterious effects of beneficial and lethal mutations. In the colon, a crypt stem cell architecture reduces the number of mitotic cells at risk for mutation accumulation, and multiple niche stem cells ensure that a lethal mutation within any single stem cell does not lead to crypt death. In addition, the architecture of the colon crypt stem cell niche may harness probability or chance to randomly discard many beneficial mutations that might lead to cancer. An analysis of somatic chromosome copy number alterations (CNAs reveals a lack of perfect fidelity in individual normal human crypts, with age-related increases and higher frequencies in ulcerative colitis, a proliferative, inflammatory disease. The age-related increase in somatic CNAs appears consistent with relatively normal replication error and cell division rates. Surprisingly, and similar to point mutations in cancer genomes, the types of crypt mutations were more consistent with random fixation rather than selection. In theory, a simple non-Darwinian way to nullify selection is to reduce the size of the reproducing population. Fates are more determined by chance rather than selection in very small populations, and therefore selection may be minimized within small crypt niches. The desired effect is that many beneficial mutations that might lead to cancer are randomly lost by drift rather than fixed by selection. The subdivision of the colon into multiple very small stem cell niches may trade Darwinian evolution for non-Darwinian somatic cell evolution, capitulating to aging but reducing cancer risks.

Preliminary report on diatoms from the deep lake terraces, Vestfold Hills, Antarctica

Digital Repository Service at National Institute of Oceanography (India)

Setty, M.G.A.P.; Kellogg, D.E.; Kellogg, T.B.

with fragments of pyroxenite, quartzite, permatite, gneiss, and glacial debris. Halite and mirabilite crystals are common. A general study of foraminifera of the lake sediments of the Vestfold Hills was made and the results are presented here...

Correct thermodynamic forces in Tsallis thermodynamics: connection with Hill nanothermodynamics

International Nuclear Information System (INIS)

Garcia-Morales, Vladimir; Cervera, Javier; Pellicer, Julio

2005-01-01

The equivalence between Tsallis thermodynamics and Hill's nanothermodynamics is established. The correct thermodynamic forces in Tsallis thermodynamics are pointed out. Through this connection we also find a general expression for the entropic index q which we illustrate with two physical examples, allowing in both cases to relate q to the underlying dynamics of the Hamiltonian systems

Spatial analysis of Northern Goshawk Territories in the Black Hills, South Dakota

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Klaver, Robert W.; Backlund, Douglas; Bartelt, Paul E.; Erickson, Michael G.; Knowles, Craig J.; Knowles, Pamela R.; Wimberly, Michael

2012-01-01

The Northern Goshawk (Accipiter gentilis) is the largest of the three North American species ofAccipiter and is more closely associated with older forests than are the other species. Its reliance on older forests has resulted in concerns about its status, extensive research into its habitat relationships, and litigation. Our objective was to model the spatial patterns of goshawk territories in the Black Hills, South Dakota, to make inferences about the underlying processes. We used a modification of Ripley's K function that accounts for inhomogeneous intensity to determine whether territoriality or habitat determined the spacing of goshawks in the Black Hills, finding that habitat conditions rather than territoriality were the determining factor. A spatial model incorporating basal area of trees in a stand of forest, canopy cover, age of trees >23 cm in diameter, number of trees per hectare, and geographic coordinates provided good fit to the spatial patterns of territories. There was no indication of repulsion at close distances that would imply spacing was determined by territoriality. These findings contrast with those for the Kaibab Plateau, Arizona, where territoriality is an important limiting factor. Forest stands where the goshawk nested historically are now younger and have trees of smaller diameter, probably having been modified by logging, fire, and insects. These results have important implications for the goshawk's ecology in the Black Hills with respect to mortality, competition, forest fragmentation, and nest-territory protection.

Spatial variations in the frequency-magnitude distribution of earthquakes at Soufriere Hills Volcano, Montserrat, West Indies

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Power, J.A.; Wyss, M.; Latchman, J.L.

1998-01-01

The frequency-magnitude distribution of earthquakes measured by the b-value is determined as a function of space beneath Soufriere Hills Volcano, Montserrat, from data recorded between August 1, 1995 and March 31, 1996. A volume of anomalously high b-values (b > 3.0) with a 1.5 km radius is imaged at depths of 0 and 1.5 km beneath English's Crater and Chance's Peak. This high b-value anomaly extends southwest to Gage's Soufriere. At depths greater than 2.5 km volumes of comparatively low b-values (b-1) are found beneath St. George's Hill, Windy Hill, and below 2.5 km depth and to the south of English's Crater. We speculate the depth of high b-value anomalies under volcanoes may be a function of silica content, modified by some additional factors, with the most siliceous having these volumes that are highly fractured or contain high pore pressure at the shallowest depths. Copyright 1998 by the American Geophysical Union.

Universal global imprints of genome growth and evolution--equivalent length and cumulative mutation density.

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Hong-Da Chen

Full Text Available BACKGROUND: Segmental duplication is widely held to be an important mode of genome growth and evolution. Yet how this would affect the global structure of genomes has been little discussed. METHODS/PRINCIPAL FINDINGS: Here, we show that equivalent length, or L(e, a quantity determined by the variance of fluctuating part of the distribution of the k-mer frequencies in a genome, characterizes the latter's global structure. We computed the L(es of 865 complete chromosomes and found that they have nearly universal but (k-dependent values. The differences among the L(e of a chromosome and those of its coding and non-coding parts were found to be slight. CONCLUSIONS: We verified that these non-trivial results are natural consequences of a genome growth model characterized by random segmental duplication and random point mutation, but not of any model whose dominant growth mechanism is not segmental duplication. Our study also indicates that genomes have a nearly universal cumulative "point" mutation density of about 0.73 mutations per site that is compatible with the relatively low mutation rates of (1-5 x 10(-3/site/Mya previously determined by sequence comparison for the human and E. coli genomes.

Ecological Study in Two Quarried Limestone Karst Hills in Bogor West Java: Vegetation Structure and Floristic Composition

OpenAIRE

SATYANTI, ANNISA; CANDRA KUSUMA, YAYAN WAHYU

2010-01-01

Many species extinctions have probably gone unnoticed on limestone that was destroyed before they could be sampled. Unless biodiversity surveys are intensified, the true magnitude of extinctions will never be ascertained. The objectives of this study were to determine tree species composition of limestone hills in Nyungcung and Ciampea; to determine quantitatively the dominant and less dominant species and to quantify floristic structure of the two limestone hills. Value of richness (Menhinic...

A report of the threatened plant Decalepis hamiltonii Wight & Arn. (Asclepiadaceae from the mid elevation forests of Pachamalai Hills of the Eastern Ghats, Tamil Nadu, India

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V. Anburaja

2012-12-01

Full Text Available The Pachamalai Hills are a part of the Eastern Ghats and are situated in the central region of Tamil Nadu. The vegetated area is distributed into 35 reserved forests of Pachamalai Hills. The plant Decalepis hamiltonii Wight & Arn. is one of the threatened plant found in the study area. This indicates that the Pachamalai Hills can harbour good vegetation which are the vestiges of a luxuriant vegetation cover of the past era, hence, need to be protected. The hills are most significant socio-culturally because of the diversified forest patches found there. These hills have been studied earlier mainly for floristic analysis. Before this, D. hamiltonii has not been collected from Pachamalai.

Two additions to the flora of the Palni Hills, southern India

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S. Soosairaj

2016-08-01

Full Text Available Hiptage parvifolia Wight & Arn. (Malpighiaceae and Kalanchoe olivacea Dalz. & Gibs. (Crassulaceae are collected and reported for the first time from the Palni hills of Western Ghats from Tamil Nadu, India. This paper provided a detailed taxonomic description, distribution, illustrations and photographs for their easy identification.

Effect of BRCA germline mutations on breast cancer prognosis

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Baretta, Zora; Mocellin, Simone; Goldin, Elena; Olopade, Olufunmilayo I.; Huo, Dezheng

2016-01-01

Abstract Background: The contribution of BRCA germline mutational status to breast cancer patients’ prognosis is unclear. We aimed to systematically review and perform meta-analysis of the available evidence of effects of BRCA germline mutations on multiple survival outcomes of breast cancer patients as a whole and in specific subgroups of interest, including those with triple negative breast cancer, those with Ashkenazi Jewish ancestry, and patients with stage I–III disease. Methods: Sixty studies met all inclusion criteria and were considered for this meta-analysis. These studies involved 105,220 breast cancer patients, whose 3588 (3.4%) were BRCA mutations carriers. The associations between BRCA genes mutational status and overall survival (OS), breast cancer-specific survival (BCSS), recurrence-free survival (RFS), and distant metastasis-free survival (DMFS) were evaluated using random-effect models. Results: BRCA1 mutation carriers have worse OS than BRCA-negative/sporadic cases (hazard ratio, HR 1.30, 95% CI: 1.11–1.52) and worse BCSS than sporadic/BRCA-negative cases among patients with stage I–III breast cancer (HR 1.45, 95% CI: 1.01–2.07). BRCA2 mutation carriers have worse BCSS than sporadic/BRCA-negative cases (HR 1.29, 95% CI: 1.03–1.62), although they have similar OS. Among triple negative breast cancer, BRCA1/2 mutations carriers had better OS than BRCA-negative counterpart (HR 0.49, 95% CI: 0.26–0.92). Among Ashkenazi Jewish women, BRCA1/2 mutations carriers presented higher risk of death from breast cancer (HR 1.44, 95% CI: 1.05–1.97) and of distant metastases (HR 1.82, 95% CI: 1.05–3.16) than sporadic/BRCA-negative patients. Conclusion: Our results support the evaluation of BRCA mutational status in patients with high risk of harboring BRCA germline mutations to better define the prognosis of breast cancer in these patients. PMID:27749552

The spatial variance of hill slope erosion in Loess Hilly Area by 137Cs tracing method

International Nuclear Information System (INIS)

Li Mian; Yang Jianfeng; Shen Zhenzhou; Hou Jiancai

2009-01-01

Based on analysis of 137 Cs activities in soil profiles on hill slope of different slope lengths in the Loess Hilly Area in China, the spatial variance of erosion was studied. The results show that the slope length has great impact on the spatial distribution of the soil erosion intensity, and the soil erosion intensity on loess hill slope was in a fluctuating tendency. In the influx process of runoff in a small watershed, net soil loss intensity increased first and then decreased with flow distance. (authors)

Stratigraphy, age, and depositional setting of the Miocene Barstow Formation at Harvard Hill, central Mojave Desert, California

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Leslie, Shannon R.; Miller, David M.; Wooden, Joseph L.; Vazquez, Jorge A.

2010-01-01

New detailed geologic mapping and geochronology of the Barstow Formation at Harvard Hill, 30 km east of Barstow, CA, help to constrain Miocene paleogeography and tectonics of the central Mojave Desert. A northern strand of the Quaternary ENE-striking, sinistral Manix fault divides the Barstow Formation at Harvard Hill into two distinct lithologic assemblages. Strata north of the fault consist of: a green rhyolitic tuff, informally named the Shamrock tuff; lacustrine sandstone; partially silicified thin-bedded to massive limestone; and alluvial sandstone to pebble conglomerate. Strata south of the fault consist of: lacustrine siltstone and sandstone; a rhyolitic tuff dated at 19.1 Ma (U-Pb); rock-avalanche breccia deposits; partially silicified well-bedded to massive limestone; and alluvial sandstone and conglomerate. Our U-Pb zircon dating of the Shamrock tuff by SHRIMP-RG yields a peak probability age of 18.7 ± 0.1 Ma. Distinctive outcrop characteristics, mineralogy, remanent magnetization, and zircon geochemistry (Th/U) suggest that the Shamrock tuff represents a lacustrine facies of the regionally extensive Peach Spring Tuff (PST). Here we compare zircon age and geochemical analyses from the Shamrock tuff with those of the PST at Stoddard Wash and provide new insight into the age of zircon crystallization in the PST rhyolite. Results of our field studies show that Miocene strata at Harvard Hill mostly accumulated in a lacustrine environment, although depositional environments varied from a relatively deep lake to a very shallow lake or even onshore setting. Rock-avalanche breccias and alluvial deposits near the base of the exposed section indicate proximity to a steep basin margin and detrital studies suggest a southern source for coarse-grained deposits; therefore, we may infer a southern basin-margin setting at Harvard Hill during the early Miocene. Our geochronology demonstrates that deposition of the Barstow Formation at Harvard Hill extended from before

Interfacial liquid water on Mars and its potential role in formation of hill and dune gullies

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Kossacki, Konrad J.; Markiewicz, Wojciech J.

2010-11-01

Gullies are among the most intriguing structures identified on the surface of Mars. Most common are gullies located on the slopes of craters which are probably formed by liquid water transported by shallow aquifers (Heldmann, J.L., Carlsson, E., Johansson, H., Mellon, M.T., Toon, O.B. [2007]. Icarus 188, 324-344). Two particular types of gullies are found on slopes of isolated hills and dunes. The hill-slope gullies are located mostly at 50°S, which is at the high end of latitudes of bulk of the gullies found so far. The dune gullies are found in several locations up to 65°S (Reiss, D., Jaumann, R., Kereszturi, A., Sik, A., Neukum, G. [2007]. Lunar Planet. Sci. XXXVIII. Abstract 1993), but the best known are those in Russel crater at 54°S. The hill and dune gullies are longer than others making the aquifers explanation for their formation unlikely (Balme, M., Mangold, N., Baratoux, D., Costard, F., Gosselin, M., Masson, P., Pnet, P., Neukum, G. [2006]. J. Geophys. Res. 111. doi:10.1029/2005JE002607). Recently it has been noted that thin liquid films of interfacial water can play a role in rheological processes on the surface of Mars (Moehlmann, D. [2008]. Icarus 195, 131-139. Kereszturi, A., Moehlmann, D., Berczi, Sz., Ganti, T., Kuti, A., Sik, A., Horvath, A. [2009]. Icarus 201, 492-503.). Here we try to answer the question whether interfacial liquid water may occur on Mars in quantities large enough to play a role in formation of gullies. To verify this hypothesis we have calculated thermal models for hills and dunes of various steepness, orientation and physical properties. We find that within a range of average expected values of parameters it is not possible to have more than a few monolayers of liquid water at depths greater than a centimeter. To create subsurface interfacial water film significantly thicker and hence to produce conditions for the slope instability, parameters have to be chosen to have their extreme realistic values or an additional source

Geochemistry and petrography of the MacAlpine Hills lunar meteorites

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Lindstrom, Marilyn M.; Mckay, David S.; Wentworth, Susan J.; Martinez, Rene R.; Mittlefehldt, David W.; Wang, Ming-Sheng; Lipschutz, Michael E.

1991-01-01

MacAlpine Hills 88104 and 88105, anorthositic lunar meteorites recovered form the same area in Antartica, are characterized. Petrographic studies show that MAC88104/5 is a polymict breccia dominated by impact melt clasts. It is better classified as a fragmental breccia than a regolith breccia. The bulk composition is ferroan and highly aluminous (Al2O3-28 percent).

What's inside the black box: a case study of allocative politics in the Hill-Burton program.

Science.gov (United States)

Feshbach, D

1979-01-01

This paper explores the political and bureaucratic determinants of grant allocations within the Hospital Survey and Construction Act of 1946 (the Hill-Burton Act), which established the major hospital construction subsidy program in the United States. Resource allocation within the Hill-Burton Program was neither purely a function of external political forces impinging on the state nor purely a result of internal organizational factors. Instead, as shown in the analysis which follows, external political forces shaped program structure, operating routines, and rules and regulations at the time of the Program's formation. Rules and regulations depoliticized the grant allocation process while institutionalizing the interests of hospitals and other producers into the program structure. Consumer interests and influence are excluded from program decision making. Once established, the rules and regulations and a set of bureaucratic behaviors play a critical role in determining resource allocation. Rules and regulations facilitate distributing divisible benefits to producer interests in a politically predi-table way. Yet rules and regulations must also regulate the supply of hospital beds in accordance with local and national market conditions. The mode of operations required for distributing benefits in a politically predictable way limited the Program's ability to regulate hospital bed supply. This was a critical factor which led the Hill-Burton Program to subsidize excess capacity in the U.S. hospital system and is a useful way of explaning many similar dysfunctions within allocative programs such as Hill-Burton.

Reactions to Hill End Adolescent Unit: Interviews with 20 Ex-Patients.

Science.gov (United States)

Stuart-Smith, Sue

1994-01-01

Interviewed 20 adolescents recently discharged from Hill End Adolescent Unit. Over one-half of sample described some benefit, most notably from drama therapy, family therapy, and peer group support. Areas of difficulty included objections to video recording and one-way mirrors; dislike of being on grounds of psychiatric hospital; inadequate…

Macrohabitat associations of Merriam's turkeys in the Black Hills, South Dakota

Science.gov (United States)

Mark A. Rumble; Stanley H. Anderson

1993-01-01

Merriam's turkeys (Meleagris gallopavo merriami) were introduced into South Dakota in the late 1940's and have since expanded to occupy the entire Black Hills. Because little is known of their habitat requirements and the effects of forest management practices on this important game species, macrohabitat selections patterns of Merriam'...

Notes on the “Lima orchid” Chloraea undulata and its record in the hills of Asia, Cañete, Peru

Directory of Open Access Journals (Sweden)

Miguel Lleellish Juscamayta

2015-12-01

Full Text Available Chloraea undulata is an orchid endemic to Peru. Originally collected by Antonio Raimondi in XIX century, until first half of the last century it has been regarded as a species characteristic of the hills around Lima. The “Lima orchid” Chloraea undulata is considered to be in decline in the hills of Lima province, especially in the type localities of Cerro Amancaes and Cerro El Agustino where urban growth and expansion has been significant. In this paper its presence in the hills of Asia District, 100 km south of Lima, is documented, and we also analyzed the implications of this finding for the species conservation and their habitat.

THE MEANING OF RELATIONSHIP IN HEMINGWAY’S “HILLS LIKE WHITE ELEPHANT”

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Susanty Susanty

2015-12-01

Full Text Available This article is intended to postulate the position of women described well by Hemingway as a girl called Jig in “Hills like White Elephants” as a marginal part of a patriarchal society. Difficulty is found in describing the exact nature of a man-woman relationship in Hemingway as the woman characters are so thinly portrayed. “Hills like White Elephants” suggests a relationship between the meaning of white elephants and the man’s attitude toward the unborn child. The relationship presents the representation of boredom, desperateness of life, the sense of lost happiness, and the awareness of the failure of love. The story also can be defined into a two-part theme. The first is a commentary about the way selfishness can corrupt a relationship. The second comments on life and what it means to bear life. Keywords: attitude, character, Hemingway, relationship, women

Energy parasites trigger oncogene mutation.

Science.gov (United States)

Pokorný, Jiří; Pokorný, Jan; Jandová, Anna; Kobilková, Jitka; Vrba, Jan; Vrba, Jan

2016-10-01

Cancer initialization can be explained as a result of parasitic virus energy consumption leading to randomized genome chemical bonding. Analysis of experimental data on cell-mediated immunity (CMI) containing about 12,000 cases of healthy humans, cancer patients and patients with precancerous cervical lesions disclosed that the specific cancer and the non-specific lactate dehydrogenase-elevating (LDH) virus antigen elicit similar responses. The specific antigen is effective only in cancer type of its origin but the non-specific antigen in all examined cancers. CMI results of CIN patients display both healthy and cancer state. The ribonucleic acid (RNA) of the LDH virus parasitizing on energy reduces the ratio of coherent/random oscillations. Decreased effect of coherent cellular electromagnetic field on bonding electrons in biological macromolecules leads to elevating probability of random genome reactions. Overlapping of wave functions in biological macromolecules depends on energy of the cellular electromagnetic field which supplies energy to bonding electrons for selective chemical bonds. CMI responses of cancer and LDH virus antigens in all examined healthy, precancerous and cancer cases point to energy mechanism in cancer initiation. Dependence of the rate of biochemical reactions on biological electromagnetic field explains yet unknown mechanism of genome mutation.

The Hill-determinant perturbation theory with triangular propagators

International Nuclear Information System (INIS)

Znojil, M.

1996-01-01

A new version of the Rayleigh-Schroedinger perturbation prescription is proposed. Its main formal feature lies in an unusual choice of the model space and unperturbed H 0 and in a resulting lower-triangular matrix structure of its propagators. Within the framework of the so-called Hill-determinant method, an admissibility of any incompletely solvable zero-order Hamiltonian is achieved in this way. As a consequence, the range of practical applicability of our new perturbative formalism may be expected to incorporate many new phenomenological interactions with a strongly anharmonic character. 18 refs

A Comparison of Evolutionary Algorithms for Tracking Time-Varying Recursive Systems

Directory of Open Access Journals (Sweden)

White Michael S

2003-01-01

Full Text Available A comparison is made of the behaviour of some evolutionary algorithms in time-varying adaptive recursive filter systems. Simulations show that an algorithm including random immigrants outperforms a more conventional algorithm using the breeder genetic algorithm as the mutation operator when the time variation is discontinuous, but neither algorithm performs well when the time variation is rapid but smooth. To meet this deficit, a new hybrid algorithm which uses a hill climber as an additional genetic operator, applied for several steps at each generation, is introduced. A comparison is made of the effect of applying the hill climbing operator a few times to all members of the population or a larger number of times solely to the best individual; it is found that applying to the whole population yields the better results, substantially improved compared with those obtained using earlier methods.

IMPLEMENTASI ALGORITMA HILL CLIMBING DAN ALGORITMA A* DALAM PENYELESAIAN PENYUSUNAN SUKU KATA DASAR DENGAN POLA PERMAINAN BINTANG KEJORA

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Nurdin Nurdin

2016-07-01

Full Text Available Permainan Bintang Kejora merupakan permainan yang sama seperti permainan pergeseran angka dalam kotak berbentuk persegi (Puzzle. Jenis permainan seperti ini cenderung mudah untuk diselesaikan. Bentuk wadah bintang menyebabkan arah pergeseran akan menjadi terbatas. Permainan bintang kejora ini cukup rumit dan sukar untuk diselesaikan secara manual. Permainan ini dapat diselesaikan dengan metode heuristik, yaitu dengan menggunakan algoritma hill climbing dan algoritma A*. Sifat algoritma hill climbing adalah mencari kemungkinan-kemungkinan dari calon solusi untuk mendapatkan yang optimal bagi penyelesaian masalah dengan mencari nilai heuristik yang terkecil. Sedangkan algoritma A* membantu menemukan solusi pencarian dalam ruang keadaan dengan mempertimbangkan nilai heuristik terbesar yang dilacak sesuai node yang akan dilewati. Pembuatan perangkat lunak ini dirancang terlebih dahulu dengan menggunakan diagram State Transition Diagram, Use Case Diagram, Activity Diagram, dan Class Diagram. Perangkat lunak ini dapat memberikan penyelesaian yang optimum atas permainan bintang kejora yang nantinya menghasilkan huruf yang sebelumnya diacak menjadi tersusun membentuk sebuah kata dasar. Hasil yang didapatkan berupa langkah-langkah ditemukan solusi serta ditampilkan waktu pencarian yang dibutuhkan dalam menemukan solusi. Pencarian A* lebih cepat menemukan solusi dibandingkan Hill Climbing, karena A* mencari nilai heuristik pada jarak yang terjauh sehingga langsung tepat menuju sasaran. Kata kunci: Hill Climbing, Algoritma A*, Bintang Kejora

Land use in, and water quality of, the Pea Hill Arm of Lake Gaston, Virginia and North Carolina, 1988-90

Science.gov (United States)

Woodside, Michael D.

1994-01-01

The City of Virginia Beach currently (1994) supplies water to about 400,000 people in southeastern Virginia. The city plans to withdraw water from the Pea Hill Arm of Lake Gaston to meet projected water needs of the population to the year 2030. The purpose of this report is to (1) describe the temporal and spatial distribution of selected water-quality constituents, (2) document current (1989) land use and land cover in the Pea Hill Arm drainage basin, and (3) discuss relations, if any, between the quality of water in the inlets within the Pea Hill Arm and land uses. The report focuses on water-quality problems in the basin, including changes in concentrations of major ions, nutrients, and algae associated with urban development adjacent to water bodies.The Pea Hill Arm was classified as mesotrophic on the basis of the range of concentrations of total phosphorus (0.001 to 0.61 milligrams per liter); the range of concentrations of total organic-plus-ammonia nitrogen (0.2 to 1.4 milligrams per liter); and the range of concentrations of chlorophyll a (1.4 to 56 micrograms per liter). These water-quality data were collected at 3 feet below the water surface during water years 1989-90.Thermal stratification in Pea Hill Arm generally began in April and ended in September. Water below a depth of about 25 feet generally became anoxic by June. Destratification generally began in late September and was completed by November. Lake Gaston followed the same general stratification and destratification pattern as Pea Hill Arm, except Lake Gaston was partially destratified during the summer when large amounts of water were released from John H. Kerr Reservoir and Lake Gaston Dams. During water year 1988, streamflows were 33 percent below the long-term mean-annual streamflows at one of the major streams to Lake Gaston. Low streamflows contributed to elevated specific conductances and concentrations of sodium, calcium, magnesium, and alkalinity from October 1988 to February 1989 at

The Bolund Experiment, Part I: Flow Over a Steep, Three-Dimensional Hill

DEFF Research Database (Denmark)

Berg, Jacob; Mann, Jakob; Bechmann, Andreas

2011-01-01

for erecting a turbine based on resource constraints unfortunately also imposes a penalty of high dynamic loads. On the lee side of Bolund, recirculation occurs with the turbulence intensity remaining significantly enhanced even at one hill length downstream. Its transient behaviour and many recirculation...

mtDNA mutation C1494T, haplogroup A, and hearing loss in Chinese

International Nuclear Information System (INIS)

Wang Chengye; Kong Qingpeng; Yao Yonggang; Zhang Yaping

2006-01-01

Mutation C1494T in mitochondrial 12S rRNA gene was recently reported in two large Chinese families with aminoglycoside-induced and nonsyndromic hearing loss (AINHL) and was claimed to be pathogenic. This mutation, however, was first reported in a sample from central China in our previous study that was aimed to reconstruct East Asian mtDNA phylogeny. All these three mtDNAs formed a subclade defined by mutation C1494T in mtDNA haplogroup A. It thus seems that mutation C1494T is a haplogroup A-associated mutation and this matrilineal background may contribute a high risk for the penetrance of mutation C1494T in Chinese with AINHL. To test this hypothesis, we first genotyped mutation C1494T in 553 unrelated individuals from three regional Chinese populations and performed an extensive search for published complete or near-complete mtDNA data sets (>3000 mtDNAs), we then screened the C1494T mutation in 111 mtDNAs with haplogroup A status that were identified from 1823 subjects across China. The search for published mtDNA data sets revealed no other mtDNA besides the above-mentioned three carrying mutation C1494T. None of the 553 randomly selected individuals and the 111 haplogroup A mtDNAs was found to bear this mutation. Therefore, our results suggest that C1494T is a very rare event. The mtDNA haplogroup A background in general is unlikely to play an active role in the penetrance of mutation C1494T in AINHL

Lithological mapping of Kanjamalai hill using hyperspectral remote sensing tools in Salem district, Tamil Nadu, India

Science.gov (United States)

Arulbalaji, Palanisamy; Balasubramanian, Gurugnanam

2017-07-01

This study uses advanced spaceborne thermal emission and reflection radiometer (ASTER) hyperspectral remote sensing techniques to discriminate rock types composing Kanjamalai hill located in the Salem district of Tamil Nadu, India. Kanjamalai hill is of particular interest because it contains economically viable iron ore deposits. ASTER hyperspectral data were subjected to principal component analysis (PCA), independent component analysis (ICA), and minimum noise fraction (MNF) to improve identification of lithologies remotely and to compare these digital data results with published geologic maps. Hyperspectral remote sensing analysis indicates that PCA (R∶G∶B=2∶1∶3), MNF (R∶G∶B=3∶2∶1), and ICA (R∶G∶B=1∶3∶2) provide the best band combination for effective discrimination of lithological rock types composing Kanjamalai hill. The remote sensing-derived lithological map compares favorably with a published geological map from Geological Survey of India and has been verified with ground truth field investigations. Therefore, ASTER data-based lithological mapping provides fast, cost-effective, and accurate geologic data useful for lithological discrimination and identification of ore deposits.

ON THE VALIDITY OF THE 'HILL RADIUS CRITERION' FOR THE EJECTION OF PLANETS FROM STELLAR HABITABLE ZONES

International Nuclear Information System (INIS)

Cuntz, M.; Yeager, K. E.

2009-01-01

We challenge the customary assumption that the entering of an Earth-mass planet into the Hill radius (or multiples of the Hill radius) of a giant planet is a valid criterion for its ejection from the star-planet system. This assumption has widely been used in previous studies, especially those with an astrobiological focus. As intriguing examples, we explore the dynamics of the systems HD 20782 and HD 188015. Each system possesses a giant planet that remains in or crosses into the stellar habitable zone, thus effectively thwarting the possibility of habitable terrestrial planets. In the case of HD 188015, the orbit of the giant planet is almost circular, whereas in the case of HD 20782, it is extremely elliptical. Although it is found that Earth-mass planets are eventually ejected from the habitable zones of these systems, the 'Hill Radius Criterion' is identified as invalid for the prediction of when the ejection is actually occurring.

VarWalker: personalized mutation network analysis of putative cancer genes from next-generation sequencing data.

Science.gov (United States)

Jia, Peilin; Zhao, Zhongming

2014-02-01

A major challenge in interpreting the large volume of mutation data identified by next-generation sequencing (NGS) is to distinguish driver mutations from neutral passenger mutations to facilitate the identification of targetable genes and new drugs. Current approaches are primarily based on mutation frequencies of single-genes, which lack the power to detect infrequently mutated driver genes and ignore functional interconnection and regulation among cancer genes. We propose a novel mutation network method, VarWalker, to prioritize driver genes in large scale cancer mutation data. VarWalker fits generalized additive models for each sample based on sample-specific mutation profiles and builds on the joint frequency of both mutation genes and their close interactors. These interactors are selected and optimized using the Random Walk with Restart algorithm in a protein-protein interaction network. We applied the method in >300 tumor genomes in two large-scale NGS benchmark datasets: 183 lung adenocarcinoma samples and 121 melanoma samples. In each cancer, we derived a consensus mutation subnetwork containing significantly enriched consensus cancer genes and cancer-related functional pathways. These cancer-specific mutation networks were then validated using independent datasets for each cancer. Importantly, VarWalker prioritizes well-known, infrequently mutated genes, which are shown to interact with highly recurrently mutated genes yet have been ignored by conventional single-gene-based approaches. Utilizing VarWalker, we demonstrated that network-assisted approaches can be effectively adapted to facilitate the detection of cancer driver genes in NGS data.

Guanine holes are prominent targets for mutation in cancer and inherited disease.

Directory of Open Access Journals (Sweden)

Albino Bacolla

Full Text Available Single base substitutions constitute the most frequent type of human gene mutation and are a leading cause of cancer and inherited disease. These alterations occur non-randomly in DNA, being strongly influenced by the local nucleotide sequence context. However, the molecular mechanisms underlying such sequence context-dependent mutagenesis are not fully understood. Using bioinformatics, computational and molecular modeling analyses, we have determined the frequencies of mutation at G • C bp in the context of all 64 5'-NGNN-3' motifs that contain the mutation at the second position. Twenty-four datasets were employed, comprising >530,000 somatic single base substitutions from 21 cancer genomes, >77,000 germline single-base substitutions causing or associated with human inherited disease and 16.7 million benign germline single-nucleotide variants. In several cancer types, the number of mutated motifs correlated both with the free energies of base stacking and the energies required for abstracting an electron from the target guanines (ionization potentials. Similar correlations were also evident for the pathological missense and nonsense germline mutations, but only when the target guanines were located on the non-transcribed DNA strand. Likewise, pathogenic splicing mutations predominantly affected positions in which a purine was located on the non-transcribed DNA strand. Novel candidate driver mutations and tissue-specific mutational patterns were also identified in the cancer datasets. We conclude that electron transfer reactions within the DNA molecule contribute to sequence context-dependent mutagenesis, involving both somatic driver and passenger mutations in cancer, as well as germline alterations causing or associated with inherited disease.

RDEL: Restart Differential Evolution algorithm with Local Search Mutation for global numerical optimization

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Ali Wagdy Mohamed

2014-11-01

Full Text Available In this paper, a novel version of Differential Evolution (DE algorithm based on a couple of local search mutation and a restart mechanism for solving global numerical optimization problems over continuous space is presented. The proposed algorithm is named as Restart Differential Evolution algorithm with Local Search Mutation (RDEL. In RDEL, inspired by Particle Swarm Optimization (PSO, a novel local mutation rule based on the position of the best and the worst individuals among the entire population of a particular generation is introduced. The novel local mutation scheme is joined with the basic mutation rule through a linear decreasing function. The proposed local mutation scheme is proven to enhance local search tendency of the basic DE and speed up the convergence. Furthermore, a restart mechanism based on random mutation scheme and a modified Breeder Genetic Algorithm (BGA mutation scheme is combined to avoid stagnation and/or premature convergence. Additionally, an exponent increased crossover probability rule and a uniform scaling factors of DE are introduced to promote the diversity of the population and to improve the search process, respectively. The performance of RDEL is investigated and compared with basic differential evolution, and state-of-the-art parameter adaptive differential evolution variants. It is discovered that the proposed modifications significantly improve the performance of DE in terms of quality of solution, efficiency and robustness.

Identifying uniformly mutated segments within repeats.

Science.gov (United States)

Sahinalp, S Cenk; Eichler, Evan; Goldberg, Paul; Berenbrink, Petra; Friedetzky, Tom; Ergun, Funda

2004-12-01

Given a long string of characters from a constant size alphabet we present an algorithm to determine whether its characters have been generated by a single i.i.d. random source. More specifically, consider all possible n-coin models for generating a binary string S, where each bit of S is generated via an independent toss of one of the n coins in the model. The choice of which coin to toss is decided by a random walk on the set of coins where the probability of a coin change is much lower than the probability of using the same coin repeatedly. We present a procedure to evaluate the likelihood of a n-coin model for given S, subject a uniform prior distribution over the parameters of the model (that represent mutation rates and probabilities of copying events). In the absence of detailed prior knowledge of these parameters, the algorithm can be used to determine whether the a posteriori probability for n=1 is higher than for any other n>1. Our algorithm runs in time O(l4logl), where l is the length of S, through a dynamic programming approach which exploits the assumed convexity of the a posteriori probability for n. Our test can be used in the analysis of long alignments between pairs of genomic sequences in a number of ways. For example, functional regions in genome sequences exhibit much lower mutation rates than non-functional regions. Because our test provides means for determining variations in the mutation rate, it may be used to distinguish functional regions from non-functional ones. Another application is in determining whether two highly similar, thus evolutionarily related, genome segments are the result of a single copy event or of a complex series of copy events. This is particularly an issue in evolutionary studies of genome regions rich with repeat segments (especially tandemly repeated segments).

Tree species diversity and distribution patterns in tropical forests of Garo Hills.

Science.gov (United States)

A. Kumar; B.G. Marcot; A. Saxena

2006-01-01

We analyzed phytosociological characteristics and diversity patterns of tree species of tropical forests of Garo Hills, western Meghalaya, northeast India. The main vegetation of the region included primary forests, secondary forests, and sal (Shorea robusta) plantations, with 162, 132, and 87 tree species, respectively. The Shannon-Wiener...

Hill-Climbing search and diversification within an evolutionary approach to protein structure prediction.

Science.gov (United States)

Chira, Camelia; Horvath, Dragos; Dumitrescu, D

2011-07-30

Proteins are complex structures made of amino acids having a fundamental role in the correct functioning of living cells. The structure of a protein is the result of the protein folding process. However, the general principles that govern the folding of natural proteins into a native structure are unknown. The problem of predicting a protein structure with minimum-energy starting from the unfolded amino acid sequence is a highly complex and important task in molecular and computational biology. Protein structure prediction has important applications in fields such as drug design and disease prediction. The protein structure prediction problem is NP-hard even in simplified lattice protein models. An evolutionary model based on hill-climbing genetic operators is proposed for protein structure prediction in the hydrophobic - polar (HP) model. Problem-specific search operators are implemented and applied using a steepest-ascent hill-climbing approach. Furthermore, the proposed model enforces an explicit diversification stage during the evolution in order to avoid local optimum. The main features of the resulting evolutionary algorithm - hill-climbing mechanism and diversification strategy - are evaluated in a set of numerical experiments for the protein structure prediction problem to assess their impact to the efficiency of the search process. Furthermore, the emerging consolidated model is compared to relevant algorithms from the literature for a set of difficult bidimensional instances from lattice protein models. The results obtained by the proposed algorithm are promising and competitive with those of related methods.

Georadar studies on St. Benedict's Church on Lasota Hill, Kraków, Poland

Science.gov (United States)

Tomecka-Suchoń, Sylwia

2012-04-01

Georadar methodology has a considerable potential as a tool for verification of archeological hypotheses. I applied it in the present study to resolve a discussion on the importance of a Proto-Romanesque structure located on Lasota Hill. It is one of the oldest structures on the right bank of Vistula River in Kraków in Poland and some archeologists believe that it was the first seat of the rulers of Lesser Poland in the 9th century. After few decades, the prince's castle was built on Wawel Hill, where subsequently the royal castle was constructed. On the place of the abandoned Proto-Romanesque edifice, a small St. Benedict's Church was raised, but the importance of its predecessor was discussed. Archeological excavations suggested that it served as the prince's residence, but this view would be much strengthened if traces of a prince's building — palatium — could be found. With this in mind, I undertook a search for traces of palatium, employing georadar methodology. I carried out the measurements using Georadar PROEX produced by MALA Geoscience with a set of shielded antennas of frequencies 500 and 800 MHz. They permitted to construct echogram profiles, whose interpretation suggested the existence of palatium. Thus, the georadar data supported the archeological hypothesis about the important role of the Proto-Romanesque structures on Lasota Hill in the early medieval era in Poland, and at the same time demonstrated the usefulness of introducing geophysical methods to archaeology.

Hill-Climbing search and diversification within an evolutionary approach to protein structure prediction

Directory of Open Access Journals (Sweden)

Chira Camelia

2011-07-01

Full Text Available Abstract Proteins are complex structures made of amino acids having a fundamental role in the correct functioning of living cells. The structure of a protein is the result of the protein folding process. However, the general principles that govern the folding of natural proteins into a native structure are unknown. The problem of predicting a protein structure with minimum-energy starting from the unfolded amino acid sequence is a highly complex and important task in molecular and computational biology. Protein structure prediction has important applications in fields such as drug design and disease prediction. The protein structure prediction problem is NP-hard even in simplified lattice protein models. An evolutionary model based on hill-climbing genetic operators is proposed for protein structure prediction in the hydrophobic - polar (HP model. Problem-specific search operators are implemented and applied using a steepest-ascent hill-climbing approach. Furthermore, the proposed model enforces an explicit diversification stage during the evolution in order to avoid local optimum. The main features of the resulting evolutionary algorithm - hill-climbing mechanism and diversification strategy - are evaluated in a set of numerical experiments for the protein structure prediction problem to assess their impact to the efficiency of the search process. Furthermore, the emerging consolidated model is compared to relevant algorithms from the literature for a set of difficult bidimensional instances from lattice protein models. The results obtained by the proposed algorithm are promising and competitive with those of related methods.

Wind farm layout optimization in complex terrain: A preliminary study on a Gaussian hill

International Nuclear Information System (INIS)

Feng, J; Shen, W Z

2014-01-01

One of the crucial problems for wind farm (WF) development is wind farm layout optimization. It seeks to find the optimal positions of wind turbines (WTs) inside a WF, so as to maximize and/or minimize a single objective or multiple objectives, while satisfying certain constraints. Although this problem for WFs in flat terrain or offshore has been investigated in many studies, it is still a challenging problem for WFs in complex terrain. In this preliminary study, the wind flow conditions of complex terrain without WTs are first obtained from computational fluid dynamics (CFD) simulation, then an adapted Jensen wake model is developed by considering the terrain features and taking the inflow conditions as input. Using this combined method, the wake effects of WF in complex terrain are properly modelled. Besides, a random search (RS) algorithm proposed in previous study is improved by adding some adaptive mechanisms and applied to solve the layout optimization problem of a WF on a Gaussian shape hill. The layout of the WF with a certain number of WTs is optimized to maximize the total power output, which obtained steady improvements over expert guess layouts

phosphorus forms in soils of oban hills, akamkpa, cross river state ...

African Journals Online (AJOL)

PROF EKWUEME

The P fractionation method used in this study enabled us to identify variations in predominant inorganic P pools including soluble surface-adsorbed, as well as P bound to Ca and Fe/Al in Oban Hills derived and resulting soils, which allowed us to determine P availability to the vegetation. The objectives of this study were: (i).

Roosting habitat of Merriam's turkeys in the Black Hills, South Dakota

Science.gov (United States)

Mark A. Rumble

1992-01-01

Lack of roost habitat (trees >40 cm diameter breast height [dbh] and >18 m2/ha basal area) can limit populations of Merriam’s turkeys (Meleagris gallopavo merriami). The Black Hills region has relatively large populations of Merriam’s turkeys, yet trees >40 cm dbh are uncommon. Consequently, I studied...

Neutral evolution of proteins: The superfunnel in sequence space and its relation to mutational robustness

Science.gov (United States)

Noirel, Josselin; Simonson, Thomas

2008-11-01

Following Kimura's neutral theory of molecular evolution [M. Kimura, The Neutral Theory of Molecular Evolution (Cambridge University Press, Cambridge, 1983) (reprinted in 1986)], it has become common to assume that the vast majority of viable mutations of a gene confer little or no functional advantage. Yet, in silico models of protein evolution have shown that mutational robustness of sequences could be selected for, even in the context of neutral evolution. The evolution of a biological population can be seen as a diffusion on the network of viable sequences. This network is called a "neutral network." Depending on the mutation rate μ and the population size N, the biological population can evolve purely randomly (μN ≪1) or it can evolve in such a way as to select for sequences of higher mutational robustness (μN ≫1). The stringency of the selection depends not only on the product μN but also on the exact topology of the neutral network, the special arrangement of which was named "superfunnel." Even though the relation between mutation rate, population size, and selection was thoroughly investigated, a study of the salient topological features of the superfunnel that could affect the strength of the selection was wanting. This question is addressed in this study. We use two different models of proteins: on lattice and off lattice. We compare neutral networks computed using these models to random networks. From this, we identify two important factors of the topology that determine the stringency of the selection for mutationally robust sequences. First, the presence of highly connected nodes ("hubs") in the network increases the selection for mutationally robust sequences. Second, the stringency of the selection increases when the correlation between a sequence's mutational robustness and its neighbors' increases. The latter finding relates a global characteristic of the neutral network to a local one, which is attainable through experiments or molecular

Strong effects of ionizing radiation from Chernobyl on mutation rates.

Science.gov (United States)

Møller, Anders Pape; Mousseau, Timothy A

2015-02-10

In this paper we use a meta-analysis to examine the relationship between radiation and mutation rates in Chernobyl across 45 published studies, covering 30 species. Overall effect size of radiation on mutation rates estimated as Pearson's product-moment correlation coefficient was very large (E = 0.67; 95% confidence intervals (CI) 0.59 to 0.73), accounting for 44.3% of the total variance in an unstructured random-effects model. Fail-safe calculations reflecting the number of unpublished null results needed to eliminate this average effect size showed the extreme robustness of this finding (Rosenberg's method: 4135 at p = 0.05). Indirect tests did not provide any evidence of publication bias. The effect of radiation on mutations varied among taxa, with plants showing a larger effect than animals. Humans were shown to have intermediate sensitivity of mutations to radiation compared to other species. Effect size did not decrease over time, providing no evidence for an improvement in environmental conditions. The surprisingly high mean effect size suggests a strong impact of radioactive contamination on individual fitness in current and future generations, with potentially significant population-level consequences, even beyond the area contaminated with radioactive material.

Mutation Spectrum and Phenotypic Features in Noonan Syndrome with PTPN11 Mutations: Definition of Two Novel Mutations.

Science.gov (United States)

Atik, Tahir; Aykut, Ayca; Hazan, Filiz; Onay, Huseyin; Goksen, Damla; Darcan, Sukran; Tukun, Ajlan; Ozkinay, Ferda

2016-06-01

To evaluate the spectrum of PTPN11 gene mutations in Noonan syndrome patients and to study the genotype-phenotype associations. In this study, twenty Noonan syndrome patients with PTPN11 mutations were included. The patients underwent a detailed clinical and physical evaluation. To identify inherited cases, parents of all mutation positive patients were analyzed. Thirteen different PTPN11 mutations, two of them being novel, were detected in the study group. These mutations included eleven missense mutations: p.G60A, p.D61N, p.Y62D, p.Y63C, p.E69Q, p.Q79R, p.Y279C,p.N308D, p.N308S, p.M504V, p.Q510R and two novel missense mutations: p.I56V and p.I282M. The frequency of cardiac abnormalities and short stature were found to be 80 % and 80 %, respectively. Mental retardation was not observed in patients having exon 8 mutations. No significant correlations were detected between other phenotypic features and genotypes. By identifying genotype-phenotype correlations, this study provides information on phenotypes observed in NS patients with different PTPN11 mutations.

Flotation process control optimisation at Prominent Hill

International Nuclear Information System (INIS)

Lombardi, Josephine; Muhamad, Nur; Weidenbach, M.

2012-01-01

OZ Minerals' Prominent Hill copper- gold concentrator is located 130 km south east of the town of Coober Pedy in the Gawler Craton of South Australia. The concentrator was built in 2008 and commenced commercial production in early 2009. The Prominent Hill concentrator is comprised of a conventional grinding and flotation processing plant with a 9.6 Mtpa ore throughput capacity. The flotation circuit includes six rougher cells, an IseMill for regrinding the rougher concentrate and a Jameson cell heading up the three stage conventional cell cleaner circuit. In total there are four level controllers in the rougher train and ten level controllers in the cleaning circuit for 18 cells. Generic proportional — integral and derivative (PID) control used on the level controllers alone propagated any disturbances downstream in the circuit that were generated from the grinding circuit, hoppers, between cells and interconnected banks of cells, having a negative impact on plant performance. To better control such disturbances, FloatStar level stabiliser was selected for installation on the flotation circuit to account for the interaction between the cells. Multivariable control was also installed on the five concentrate hoppers to maintain consistent feed to the cells and to the IsaMill. An additional area identified for optimisation in the flotation circuit was the mass pull rate from the rougher cells. FloatStar flow optimiser was selected to be installed subsequent to the FloatStar level stabiliser. This allowed for a unified, consistent and optimal approach to running the rougher circuit. This paper describes the improvement in the stabilisation of the circuit achieved by the FloatStar level stabiliser by using the interaction matrix between cell level controllers and the results and benefits of implementing the FloatStar flow optimiser on the rougher train.

Iowa Hill Pumped Storage Project Investigations - Final Technical Report

Energy Technology Data Exchange (ETDEWEB)

Hanson, David [Sacramento Municipal Unitlity District, Sacramento, CA (United States)

2016-07-01

This Final Technical Report is a summary of the activities and outcome of the Department of Energy (DOE) Assistance Agreement DE-EE0005414 with the Sacramento Municipal Utility District (SMUD). The Assistance Agreement was created in 2012 to support investigations into the Iowa Hill Pumped-storage Project (Project), a new development that would add an additional 400 MW of capacity to SMUD’s existing 688MW Upper American River Hydroelectric Project (UARP) in the Sierra Nevada mountains east of Sacramento, California.

Urban research in a hostile setting: Godfrey Wilson in Broken Hill, Northern Rhodesia, 1938-1940

Directory of Open Access Journals (Sweden)

Karen Tranberg Hansen

Full Text Available Acknowledged for his pioneering urban anthropological research in Broken Hill through the publication of An Essay on the Economics of Detribalization in Northern Rhodesia (Parts I and II, 1940 and 1941, Godfrey Wilson's professional career was cut short by his death during World War II. The late 1990s transfer and cataloguing at the University of Cape Town of the Monica and Godfrey Wilson papers has made an enormously rich research archive accessible to the public. For the first time, Godfrey Wilson's notes from his fieldwork in Broken Hill enable us to examine his research project through his own observations. Based on a preliminary overview of these records and a tentative analysis of some of their contents, this article revisits the Broken Hill research project against the background of the published essay on the economics of detribalisation. Wilson's argument about temporary urbanisation is demonstrated through migration histories, information about length of stay in towns, and an analysis of the economics of urban livelihoods that focuses on wages including rations, household expenditures, and urban-rural transfers. But the published essay barely explains how in fact he conducted his field research. Although there are very few direct indications, we can infer some of his fieldwork practices and field methodology from notes that occasionally evoke an immediate sense of the trials and tribulations of everyday African life in Broken Hill in the early World War II years. How might experiences in the field have influenced Wilson's analysis? Overall, I discuss his work from two angles, first in the context of a time and place characterised by conflicting agendas, and secondly, in retrospect as the conceptual space and time of early World War II colonial Northern Rhodesia have yielded to different explanatory perspectives.

Something All His Own: The NBA's Grant Hill Hopes His Collection of African American Art Will Inspire, Excite a Younger Generation

Science.gov (United States)

Keels, Crystal L.

2004-01-01

NBA star Grant Hill is known for his skills on the basketball court, his marriage to Grammy award-winning singer, Tamia, and, most recently, for his courageous comeback after several surgeries that jeopardized his professional basketball career. Yet, Hill's off-the-court activities currently are being considered as exemplary as his athletic…

MPL mutation profile in JAK2 mutation-negative patients with myeloproliferative disorders.

Science.gov (United States)

Ma, Wanlong; Zhang, Xi; Wang, Xiuqiang; Zhang, Zhong; Yeh, Chen-Hsiung; Uyeji, Jennifer; Albitar, Maher

2011-03-01

Mutations in the thrombopoietin receptor gene (myeloproliferative leukemia, MPL) have been reported in patients with JAK2 V617F-negative chronic myeloproliferative disorders (MPDs). We evaluated the prevalence of MPL mutations relative to JAK2 mutations in patients with suspected MPDs. A total of 2790 patient samples submitted for JAK2 mutation analysis were tested using real-time polymerase chain reaction and bidirectional sequencing of plasma RNA. JAK2 V617F-negative samples were tested for JAK2 exons 12 to 14 mutations, and those with negative results were then tested for mutations in MPL exons 10 and 11. Of the 2790 patients, 529 (18.96%) had V617F, 12 (0.43%) had small insertions or deletions in exon 12, and 7 (0.25%) had other JAK2 mutations in exons 12 to 14. Of the 2242 JAK2 mutation-negative patients, 68 (3.03%) had MPL mutations. W515L was the predominant MPL mutation (n=46; 68%), and 10 (15%) patients had other W515 variants. The remaining MPL mutations (n=12, 17%) were detected at other locations in exons 10 and 11 and included 3 insertion/deletion mutations. The S505N mutation, associated with familial MPD, was detected in 3 patients. Overall, for every 100 V617F mutations in patients with suspected MPDs, there were 12.9 MPL mutations, 2.3 JAK2 exon 12 mutations, and 1.3 JAK2 exons 13 to 14 mutations. These findings suggest that MPL mutation screening should be performed before JAK2 exons 12 to 14 testing in JAK2 V617F-negative patients with suspected MPDs.

Cobertura do solo com cama-de-frango, com e sem amontoa, na produção de beterraba Soil covering with chicken manure, with and without hilling, on beetroot yield

Directory of Open Access Journals (Sweden)

Néstor Antonio Heredia Zárate

2010-12-01

manure (dose of 10 t ha-1 and without covering with chicken manure and with and without hilling, on one (21 days after transplant and two dates (21 and 42 days after transplant. The six treatments were arranged in a 2 x 3 factorial scheme, in randomized block experimental design, with six replications. Plants cultivated using manure covering with two hillings showed greater height (25.22 cm and were superior in 3.45 cm than those plants not using covering and without hilling, those of which showed lesser height. The highest production of fresh leaf mass (11.41 t ha-1 and of roots (19.61 t ha-1 were from plants using manure covering and one and two hillings, respectively, being superior in 5.21 t ha-1 and 9.12 t ha-1, respectively, than those without covering and with one hilling, that showed the smallest yield. The highest percentages of dried leaf mass (14.36 % and of roots (17.64 % were from plants without covering and with one hilling, which were superior in 1.86 % and 2.08 %, respectively, than those plants without covering and with two hillings, those of which showed the smallest percentages. The highest yield of fresh mass of commercial roots (15.98 t ha-1, average per root (129.30 g and average diameter per root (68.93 mm were from plants using manure covering with two hillings. The greatest average length of commercial roots (64.48 mm was from plants without manure covering and with one hilling. The greatest gross (R$ 11,186.00 and net (R$ 9,746.00 incomes were from plants that received manure covering treatment with two hillings, which were superior in 124.12 % and 108.65 %, respectively, than those without manure covering and with one hilling treatment.

Selection of examples in case-based computer-aided decision systems

International Nuclear Information System (INIS)

Mazurowski, Maciej A; Zurada, Jacek M; Tourassi, Georgia D

2008-01-01

Case-based computer-aided decision (CB-CAD) systems rely on a database of previously stored, known examples when classifying new, incoming queries. Such systems can be particularly useful since they do not need retraining every time a new example is deposited in the case base. The adaptive nature of case-based systems is well suited to the current trend of continuously expanding digital databases in the medical domain. To maintain efficiency, however, such systems need sophisticated strategies to effectively manage the available evidence database. In this paper, we discuss the general problem of building an evidence database by selecting the most useful examples to store while satisfying existing storage requirements. We evaluate three intelligent techniques for this purpose: genetic algorithm-based selection, greedy selection and random mutation hill climbing. These techniques are compared to a random selection strategy used as the baseline. The study is performed with a previously presented CB-CAD system applied for false positive reduction in screening mammograms. The experimental evaluation shows that when the development goal is to maximize the system's diagnostic performance, the intelligent techniques are able to reduce the size of the evidence database to 37% of the original database by eliminating superfluous and/or detrimental examples while at the same time significantly improving the CAD system's performance. Furthermore, if the case-base size is a main concern, the total number of examples stored in the system can be reduced to only 2-4% of the original database without a decrease in the diagnostic performance. Comparison of the techniques shows that random mutation hill climbing provides the best balance between the diagnostic performance and computational efficiency when building the evidence database of the CB-CAD system.

Dot Hill's SANnet storage solutions excel at CERN's High Performance Networking Forum

CERN Multimedia

2001-01-01

Dot Hill Systems Corp. demonstrated its latest storage technolgies at the 4th HPN Forum hosted by CERN. These will be used to support CERN's ongoing high-end computing and storage requirements and to provide a gateway that will enable the next-generation DataGRID project to get off the ground.

76 FR 48120 - Black Hills National Forest, Custer, SD-Mountain Pine Beetle Response Project

Science.gov (United States)

2011-08-08

... species on lands of all ownerships in the Black Hills is ponderosa pine (Pinus ponderosae). Since 1997 the... rated as having high wildfire hazard. Since 1980, due to several factors including drought the Forest...

Mida teha, et lapsed koolist ei puuduks? / Triin Tomingas, Hille Hinsberg, Sirje Ess...[jt

Index Scriptorium Estoniae

2011-01-01

Küsimusele vastavad lapsevanemad Triin Tomingas ja Hille Hinsberg, Saaremaa ühisgümnaasiumi algklasside õppealajuhataja Sirje Ess, Tallinna Pelgulinna gümnaasiumi direktor Tõnu Piibur, MTÜ Ellu psühholoog-koolitaja Tiia Lister

Gold and radioactive elements in the bauxite deposits of Shevaroy hills, Tamil Nadu

Energy Technology Data Exchange (ETDEWEB)

Mukherjee, B K; Sengupta, D K

1982-11-01

The presence of gold and radioactive elements in the bauxite deposits of Shevaroy Hills has been determined by neutron activation technique. The behaviour of uranium supports the theoretical findings. The higher concentration of gold (<10/sup 3/%) indicates that the deposits are auriferous.

Gold and radioactive elements in the bauxite deposits of Shevaroy hills, Tamil Nadu

International Nuclear Information System (INIS)

Mukherjee, B.K.; Sengupta, D.K.

1982-01-01

The presence of gold and radioactive elements in the bauxite deposits of Shevaroy Hills has been determined by neutron activation technique. The behaviour of uranium supports the theoretical findings. The higher concentration of gold ( -3 %) indicates that the deposits are auriferous. (author)

Up-hill difuze intersticiálních prvků

Czech Academy of Sciences Publication Activity Database

Million, Bořivoj

2001-01-01

Roč. 279, č. 72 (2001), s. 149-154 ISSN 1429-6055. [mezinárodní sympozium Struktura a vlastnosti konstrukčních materiálů /16./. Komorní Lhotka, 11.12.2001-13.12.2001] R&D Projects: GA ČR GA106/01/0382; GA AV ČR IBS2041105 Institutional research plan: CEZ:AV0Z2041904 Keywords : interstitial elements * diffusion * up-hill Subject RIV: JG - Metallurgy

Technology adoption analysis of improved maize technology in western hills of Nepal

Directory of Open Access Journals (Sweden)

Jeevan Lamichhane

2015-12-01

Full Text Available The survey was carried out in two districts namely Palpa and Baglung to determine the current level of adoption of improved maize production practices. This study identifies the technology adoption extent and pattern of improved maize technologies in Western Hills of Nepal. In each of these districts, two village development committees (V.D.Cs were surveyed. Deurali and Khasyouli V.D.C from Palpa and Kudule and Malika V.D.C from Baglung Districts were selected. Structured Questionnaire were administered to 30 randomly selected households in each VDC. Altogether 120 Households were surveyed. The degree of adoption was measured on the seed rate, adoption of improved varieties, application of Nitrogenous, Phosphatic and Potassium fertilizer, Weeding and method of planting. The adoption index was used to determine the adoption level of the respondents. There seems to be a gap between the recommended practice and current level of practice at the farmers level in some of the factors like Nitrogenous, Phosphorus and Potassium fertilizers, method of planting .The study revealed that majority farmers belonged to high adoption category (57% followed by medium adoption category (54% and low adoption category (9%. The Technology Adoption Index (TAI was found 63%. In nutshell there is still large scope for yield improvement of the maize in the study area by adopting improved maize varieties.

Heaths and forests of the western hills of Chia, Bogota savanna, Colombia

International Nuclear Information System (INIS)

Cortes S, Sandra P.; Van der Hammen, Thomas; Rangel Ch, J Orlando

2000-01-01

The authors make a study of the heaths and forests of the western hills of the population of Chia, located in the savanna of Bogota and the presence or absences of these in the same Bogota savanna; the authors treat topics like their physiognomy and composition, distribution and ecology among other topics

The burden of secrecy? No effect on hill slant estimation and beanbag throwing

NARCIS (Netherlands)

Pecher, D.; Van Mierlo, H.; Canal Bruland, R.; Zeelenberg, R.

2015-01-01

Slepian, Masicampo, Toosi, and Ambady (2012, Experiment 1) reported that participants who recalled a big secret estimated a hill as steeper than participants who recalled a small secret. This finding was interpreted as evidence that secrets are experienced as physical burdens. In 2 experiments, we

The CDC Hemophilia B mutation project mutation list: a new online resource.

Science.gov (United States)

Li, Tengguo; Miller, Connie H; Payne, Amanda B; Craig Hooper, W

2013-11-01

Hemophilia B (HB) is caused by mutations in the human gene F9. The mutation type plays a pivotal role in genetic counseling and prediction of inhibitor development. To help the HB community understand the molecular etiology of HB, we have developed a listing of all F9 mutations that are reported to cause HB based on the literature and existing databases. The Centers for Disease Control and Prevention (CDC) Hemophilia B Mutation Project (CHBMP) mutation list is compiled in an easily accessible format of Microsoft Excel and contains 1083 unique mutations that are reported to cause HB. Each mutation is identified using Human Genome Variation Society (HGVS) nomenclature standards. The mutation types and the predicted changes in amino acids, if applicable, are also provided. Related information including the location of mutation, severity of HB, the presence of inhibitor, and original publication reference are listed as well. Therefore, our mutation list provides an easily accessible resource for genetic counselors and HB researchers to predict inhibitors. The CHBMP mutation list is freely accessible at http://www.cdc.gov/hemophiliamutations.

Lead dust in broken hill homes--a potential hazard for young children?

Science.gov (United States)

Boreland, F; Lyle, D M; Wlodarczyk, J; Balding, W A; Reddan, S

2002-01-01

To determine the potential hazard posed by indoor lead dust to young children in Broken Hill, a silver-lead-zinc mining town in outback Australia, and the degree to which lead flux is influenced by factors such as geographical location, house construction type and condition. 116 homes were selected and 93 (80%) studied from 10 localities in Broken Hill during the spring of 1995. Lead flux was measured using 85 mm diameter polystyrene petri dishes. Dishes were placed in four rooms of each house to collect dust over a six-to-eight-week period. Data on the location, condition and construction type of each house were recorded. Multiple linear regression was used to determine predictors of lead flux. Flux data were log transformed for the analysis. Average household lead flux varied nearly seven-fold across districts from a low of 166 (distant from the mines), to a high of 1,104 microg/m2/30-day period (adjacent to the mines). Houses that were 'adequately sealed' had 2.9 times the lead flux, and 'poorly sealed' houses 4.3 times the flux, of 'very well sealed' houses. Construction material did not significantly affect these flux levels, and no statistically significant interactions were found between house condition and location or house type. Many Broken Hill homes have high levels of lead flux that pose a potential risk to young children. Quantification of this hazard provides useful information for the community that can help focus efforts on actions required to minimise lead dust in the home. Household dust is a potential source of lead for young children in at-risk communities. Information on lead flux in homes can assist these communities and public health agencies to better understand and deal more effectively with the problem.

Ethnomedicinal survey of various communities residing in Garo Hills of Durgapur, Bangladesh.

Science.gov (United States)

Khan, Md Arif; Islam, Md Khirul; Siraj, Md Afjalus; Saha, Sanjib; Barman, Apurba Kumar; Awang, Khalijah; Rahman, Md Mustafizur; Shilpi, Jamil A; Jahan, Rownak; Islam, Erena; Rahmatullah, Mohammed

2015-05-30

Garo Hills represents one of earliest human habitation in Bangladesh preserving its ancient cultures due to the geographic location. It is situated in the most northern part of Durgapur sub-district having border with Meghalaya of India. Durgapur is rich in ethnic diversity with Garo and Hajong as the major ethnic groups along with Bangalee settlers from the mainstream population. Thus the ethnomedicinal practice in Garo Hills is considered rich as it encompasses three different groups. Present survey was undertaken to compile the medicinal plant usage among the various communities of the Garo Hills. The ethnomedicinal data was collected through open and focussed group discussions, and personal interviews using semi-structured questionnaire. A total of 185 people were interviewed, including the three community people and their traditional health practitioners (THPs). The usage of the plants were further analysed and are presented as use value (UV), informant consensus factor (ICF) and fidelity level (FL). A total of 71 plants from 46 families and 64 genera were documented during our survey. Gastrointestinal disorders represented the major ailment category with the use of 36 plant species followed by dermatological problems (25 species). The ICF ranged from 0.90 to 0.99, with an average value of 0.96. Leaves (41) were the principle source of medication followed by fruits (27). Trees (33) were the major plant type used in the ethnobotanical practice. A total of 25 plants showed high FL (70.91 to 100 %) with 12 plants showing maximum FL (100 %). A number of the plants appear to have unique ethnomedicinal uses. Present investigation revealed a rich traditional practice in the studied region, which provides primary health care to the local community. This compilation of the ethnobotanical knowledge can help researchers to identify the uses of various medicinal plants that have a long history of use.

Malaria hotspots drive hypoendemic transmission in the Chittagong Hill Districts of Bangladesh.

Directory of Open Access Journals (Sweden)

Sabeena Ahmed

Full Text Available Malaria is endemic in 13 of 64 districts of Bangladesh, representing a population at risk of about 27 million people. The highest rates of malaria in Bangladesh occur in the Chittagong Hill Districts, and Plasmodium falciparum (predominately chloroquine resistant is the most prevalent species.The objective of this research was to describe the epidemiology of symptomatic P. falciparum malaria in an area of Bangladesh following the introduction of a national malaria control program. We carried out surveillance for symptomatic malaria due to P. falciparum in two demographically defined unions of the Chittagong Hill Districts in Bangladesh, bordering western Myanmar, between October 2009 and May 2012. The association between sociodemographics and temporal and climate factors with symptomatic P. falciparum infection over two years of surveillance data was assessed. Risk factors for infection were determined using a multivariate regression model.472 cases of symptomatic P. falciparum malaria cases were identified among 23,372 residents during the study period. Greater than 85% of cases occurred during the rainy season from May to October, and cases were highly clustered geographically within these two unions with more than 80% of infections occurring in areas that contain approximately one-third of the total population. Risk factors statistically associated with infection in a multivariate logistic regression model were living in the areas of high incidence, young age, and having an occupation including jhum cultivation and/or daily labor. Use of long lasting insecticide-treated bed nets was high (89.3%, but its use was not associated with decreased incidence of infection.Here we show that P. falciparum malaria continues to be hypoendemic in the Chittagong Hill Districts of Bangladesh, is highly seasonal, and is much more common in certain geographically limited hot spots and among certain occupations.

Hills and valleys: Understanding the under-eye

Directory of Open Access Journals (Sweden)

Milind N Naik

2016-01-01

Full Text Available Soft tissue deflation and descent have long been implicated in the pathogenesis of facial aging. In the periorbital area, the upper orbital region is thought to change by descent of the eyebrow, as well as deflation of brow fat. While the understanding of the aging changes in the upper eyelid region are relatively simple, the lower eyelid poses a myriad of aging changes, each demanding a specific management plan. These can be best described in terms of elevations, or 'Hills' and hollows, or 'Valleys'. This article simplifies the understanding of the lower eyelid in the light of anatomical knowledge, and available literature. It forms a basis of easy diagnosis and treatment of the soft tissue changes in the lower eyelid and malar region.

Numerical prediction of a bulb turbine performance hill chart through RANS simulations

International Nuclear Information System (INIS)

Guénette, V; Houde, S; Ciocan, G D; Deschênes, C; Dumas, G; Huang, J

2012-01-01

Within the framework of an international research consortium on low-head hydraulic turbine flow dynamics, the predictive behavior of Reynolds Averaged Navier-Stokes (RANS) simulations of the efficiency (η) hill chart of a bulb turbine is investigated. The paper presents the impacts of the blade tip gap and the hub gaps on performance predictions.

Sighting of Branded Yeoman Algia fasciata fasciata (Felder & Felder, 1860 (Lepidoptera: Nymphalidae: Heliconiinae in Jaintia and Cachar Hills, northeastern India

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Rajkamal Goswami

2015-09-01

Full Text Available We report Branded Yeoman (Algia fasciata fasciata from the Jaintia Hills of Meghalaya and Barail Hills of Assam in India which represents a significant range extension from its known distribution across South and South East Asia including Andaman Islands. We consolidate other record of the species posted on social media website and personal communications to update the current extent and status of the species in India. 

La Ecuación de Hill con Potencial Irregular

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Santiago Cambronero

2012-03-01

Full Text Available Se considera la ecuación de Hill cuyo potencial es la derivada formal de una función Hölder - continua de parámetro \\theta \\in (0,1 y se muestra que las soluciones de la versión discreta correspondiente convergen adecuadamente a las soluciones de la ecuación original. Este hecho se usa para establecer teoremas de existencia de soluciones para este caso singular y para deducir algunas propiedades de las soluciones y el discriminante de la ecuación estudiada.

Heterogeneous Ice Nucleation by Soufriere Hills Volcanic Ash Immersed in Water Droplets.

Directory of Open Access Journals (Sweden)

T P Mangan

Full Text Available Fine particles of ash emitted during volcanic eruptions may sporadically influence cloud properties on a regional or global scale as well as influencing the dynamics of volcanic clouds and the subsequent dispersion of volcanic aerosol and gases. It has been shown that volcanic ash can trigger ice nucleation, but ash from relatively few volcanoes has been studied for its ice nucleating ability. In this study we quantify the efficiency with which ash from the Soufriere Hills volcano on Montserrat nucleates ice when immersed in supercooled water droplets. Using an ash sample from the 11th February 2010 eruption, we report ice nucleating efficiencies from 246 to 265 K. This wide range of temperatures was achieved using two separate droplet freezing instruments, one employing nanolitre droplets, the other using microlitre droplets. Soufriere Hills volcanic ash was significantly more efficient than all other ash samples that have been previously examined. At present the reasons for these differences are not understood, but may be related to mineralogy, amorphous content and surface chemistry.

Heterogeneous Ice Nucleation by Soufriere Hills Volcanic Ash Immersed in Water Droplets.

Science.gov (United States)

Mangan, T P; Atkinson, J D; Neuberg, J W; O'Sullivan, D; Wilson, T W; Whale, T F; Neve, L; Umo, N S; Malkin, T L; Murray, B J

2017-01-01

Fine particles of ash emitted during volcanic eruptions may sporadically influence cloud properties on a regional or global scale as well as influencing the dynamics of volcanic clouds and the subsequent dispersion of volcanic aerosol and gases. It has been shown that volcanic ash can trigger ice nucleation, but ash from relatively few volcanoes has been studied for its ice nucleating ability. In this study we quantify the efficiency with which ash from the Soufriere Hills volcano on Montserrat nucleates ice when immersed in supercooled water droplets. Using an ash sample from the 11th February 2010 eruption, we report ice nucleating efficiencies from 246 to 265 K. This wide range of temperatures was achieved using two separate droplet freezing instruments, one employing nanolitre droplets, the other using microlitre droplets. Soufriere Hills volcanic ash was significantly more efficient than all other ash samples that have been previously examined. At present the reasons for these differences are not understood, but may be related to mineralogy, amorphous content and surface chemistry.

The Impact of Source Distribution on Scalar Transport over Forested Hills

Science.gov (United States)

Ross, Andrew N.; Harman, Ian N.

2015-08-01

Numerical simulations of neutral flow over a two-dimensional, isolated, forested ridge are conducted to study the effects of scalar source distribution on scalar concentrations and fluxes over forested hills. Three different constant-flux sources are considered that span a range of idealized but ecologically important source distributions: a source at the ground, one uniformly distributed through the canopy, and one decaying with depth in the canopy. A fourth source type, where the in-canopy source depends on both the wind speed and the difference in concentration between the canopy and a reference concentration on the leaf, designed to mimic deposition, is also considered. The simulations show that the topographically-induced perturbations to the scalar concentration and fluxes are quantitatively dependent on the source distribution. The net impact is a balance of different processes affecting both advection and turbulent mixing, and can be significant even for moderate topography. Sources that have significant input in the deep canopy or at the ground exhibit a larger magnitude advection and turbulent flux-divergence terms in the canopy. The flows have identical velocity fields and so the differences are entirely due to the different tracer concentration fields resulting from the different source distributions. These in-canopy differences lead to larger spatial variations in above-canopy scalar fluxes for sources near the ground compared to cases where the source is predominantly located near the canopy top. Sensitivity tests show that the most significant impacts are often seen near to or slightly downstream of the flow separation or reattachment points within the canopy flow. The qualitative similarities to previous studies using periodic hills suggest that important processes occurring over isolated and periodic hills are not fundamentally different. The work has important implications for the interpretation of flux measurements over forests, even in

A novel CDKL5 mutation in a Japanese patient with atypical Rett syndrome.

Science.gov (United States)

Christianto, Antonius; Katayama, Syouichi; Kameshita, Isamu; Inazu, Tetsuya

2016-08-01

Rett syndrome (RTT) is a severe X-linked dominant inheritance disorder with a wide spectrum of clinical manifestations. Mutations in Methyl CpG binding protein 2 (MECP2), Cyclin dependent kinase-like 5 (CDKL5) and Forkhead box G1 (FOXG1) have been associated with classic and/or variant RTT. This study was conducted to identify the responsible gene(s) in atypical RTT patient, and to examine the effect of the mutation on protein function. DNA sequence analysis showed a novel heterozygous mutation in CDKL5 identified as c.530A>G which resulted in an amino acid substitution at position 177, from tyrosine to cysteine. Genotyping analysis indicated that the mutation was not merely a single nucleotide polymorphism (SNP). We also revealed that patient's blood lymphocytes had random X-chromosome inactivation (XCI) pattern. Further examination by bioinformatics analysis demonstrated the mutation caused damage or deleterious in its protein. In addition, we demonstrated in vitro kinase assay of mutant protein showed impairment of its activity. Taken together, the results suggested the mutant CDKL5 was responsible for the disease. Copyright © 2016 Elsevier B.V. All rights reserved.

Identification of mutated driver pathways in cancer using a multi-objective optimization model.

Science.gov (United States)

Zheng, Chun-Hou; Yang, Wu; Chong, Yan-Wen; Xia, Jun-Feng

2016-05-01

New-generation high-throughput technologies, including next-generation sequencing technology, have been extensively applied to solve biological problems. As a result, large cancer genomics projects such as the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium are producing large amount of rich and diverse data in multiple cancer types. The identification of mutated driver genes and driver pathways from these data is a significant challenge. Genome aberrations in cancer cells can be divided into two types: random 'passenger mutation' and functional 'driver mutation'. In this paper, we introduced a Multi-objective Optimization model based on a Genetic Algorithm (MOGA) to solve the maximum weight submatrix problem, which can be employed to identify driver genes and driver pathways promoting cancer proliferation. The maximum weight submatrix problem defined to find mutated driver pathways is based on two specific properties, i.e., high coverage and high exclusivity. The multi-objective optimization model can adjust the trade-off between high coverage and high exclusivity. We proposed an integrative model by combining gene expression data and mutation data to improve the performance of the MOGA algorithm in a biological context. Copyright © 2016 Elsevier Ltd. All rights reserved.

Choosing the Gorkha- at the crossroads of class and ethnicity in the Darjeeling hills

DEFF Research Database (Denmark)

Chettri, Mona

2013-01-01

The Darjeeling hills in northern West Bengal, India are being demanded as a homeland for the Gorkha community living in India. While the origin of Darjeeling is steeped in the imperial legacy of the British Raj, the Gorkha, a colonial construct is ironically used as a means to challenge...... the contemporary political regression and neo-colonisation of Darjeeling. Although the Gorkha identity is deemed as representative of the Nepali community residing in India, it acquires special meaning and importance in the Darjeeling hills, where majority of the people suffer low wages, unemployment......, underdevelopment and poverty. In spite of a large working force in the tea estates, economic underdevelopment and political disempowerment is voiced through the assertion of ethnic rather than a class-based identity. Through an examination of the interaction between class and ethnicity, the Gorkha identity...

The burden of secrecy? No effect on hill slant estimation and beanbag throwing.

Science.gov (United States)

Pecher, Diane; van Mierlo, Heleen; Cañal-Bruland, Rouwen; Zeelenberg, René

2015-08-01

Slepian, Masicampo, Toosi, and Ambady (2012, Experiment 1) reported that participants who recalled a big secret estimated a hill as steeper than participants who recalled a small secret. This finding was interpreted as evidence that secrets are experienced as physical burdens. In 2 experiments, we tried to replicate this finding, but, despite larger power, did not find a difference in slant estimates between participants who recalled a big secret and those who recalled a small secret. This finding was further corroborated by a meta-analysis that included 8 published data sets of exact replications, which indicates that thinking of a big secret does not affect hill slant estimation. In a third experiment, we also failed to replicate the effect of recalling a secret on throwing a beanbag at a target (Slepian et al., 2012, Experiment 2). Together, our findings question the robustness of the original empirical findings. (c) 2015 APA, all rights reserved).

Au-Pt-Pd-U mineralization in the Coronation Hill-El Sherana region, NT

International Nuclear Information System (INIS)

Wyborn, L.

1992-01-01

In 1990 BMR's Minerals and Land Use program conducted an geochemical and geophysical survey to provide the best possible basis for estimating the resource potential of the Kakadu Conservation Zone. Combining the old and new data, an integrated model for the deposit types has been developed. Although differing in metal content, all mines and prospects of the Coronation Hill region share similar timing and structural controls, suggesting that they are related to one geochemical system. The presence or absence of U in the Au-Pt-Pd mineralisation appears related to geological differences, primarily in host-rock composition. U-bearing deposits are hosted mainly in carbonaceous shales, although some U is associated with chloritic zones. Deposits lacking U, best developed at Coronation Hill, occur in a broad range of host rocks, including quartz-feldspar porphyry, green tuffaceous shale, diorite, dolomite, and sedimentary breccias. Although seemingly diverse rock types, the common components of these U-poor host units are feldspar and/or carbonate. 1 tab., 3 figs

Soufriere Hills, Montserrat, West Indies

Science.gov (United States)

2002-01-01

Volcanic activity on the West Indian island of Montserrat has remained high for several years-the current activity started in 1995. However, remote sensing of the island has been difficult because of frequent cloud cover. The International Space Station crew flew north of the island on a clear day in early July (July 9, 2001) and recorded a vigorous steam plume emanating from the summit of Soufriere Hills. The image also reveals the extensive volcanic mud flows (lahars) and new deltas built out from the coast from the large amounts of volcanic debris delivered downstream by the rivers draining the mountain. As a small island (only 13 x 8 km), all of Montserrat has been impacted by the eruptions. Sources of Information: Smithsonian Global Volcanism Program Italy's Volcanoes Montserrat Volcano Observatory Digital photograph number ISS002-E-9309 was taken on 9 July 2001 from Space Station Alpha and was provided by the Earth Sciences and Image Analysis Laboratory at Johnson Space Center. Additional images taken by astronauts and cosmonauts can be viewed at the NASA-JSC Gateway to Astronaut Photography of Earth.

CH2M Hill Hanford Group Inc (CHG) Information Resource Management (IRM) Strategic Plan

Energy Technology Data Exchange (ETDEWEB)

NELSON, R.L.

2000-05-08

The CH2M Hill Hanford Group, Inc., Information Resource Management Strategic Plan is the top-level planning document for applying information and information resource management to achieve the CHG mission for the management of the River Protection Project

CH2M Hill Hanford Group Inc (CHG) Information Resource Management (IRM) Strategic Plan

International Nuclear Information System (INIS)

NELSON, R.L.

2000-01-01

The CH2M Hill Hanford Group, Inc., Information Resource Management Strategic Plan is the top-level planning document for applying information and information resource management to achieve the CHG mission for the management of the River Protection Project

High mutation detection rate in the COL4A5 collagen gene in suspected Alport syndrome using PCR and direct DNA sequencing

DEFF Research Database (Denmark)

Martin, P; Heiskari, N; Zhou, J

1998-01-01

-amplified and sequenced from DNA of 50 randomly chosen patients with suspected Alport syndrome. Mutations were found in 41 patients, giving a mutation detection rate of 82%. Retrospective analysis of clinical data revealed that two of the cases might be autosomal. Although it could not be determined whether the remaining...

Environmental evolution and builders of small hills - India Muerta zone. A restatement

International Nuclear Information System (INIS)

Bracco, R.; Del Puerto, L.; Inda, H.; Capdepont, I.; Panario, D.; Garcia Rodriguez, F.

2012-01-01

This work is about the study carried out in India Muerta zone - Rocha town. The Paleoclimatology, the Geoarchaeology and Carbon14 dating information enable to conclude that the first inhabitants of the region has constructed the small hills for a transitional climatic period. This period belongs to the Holocene and is characterized by a humidity contraction process

Spatial patterns and processes for shifting cultivation landscape in Garo Hills, India.

Science.gov (United States)

Ashish Kumar; Bruce G. Marcot; P.S. Roy

2006-01-01

We analyzed a few spatial patterns and processes of a shifting cultivation landscape in the Garo Hills of Meghalaya state in North East India, where about 85% of land belongs to native community. The landscape comprised 2459 km2 of land with forest cover and shifting cultivation patches over 69% and 7% area of landscape, respectively. The mean...

The influence of administrative leadership: an interview with Dr Karen S. Hill.

Science.gov (United States)

Hill, Karen S; Adams, Jeffrey M

2015-01-01

This department highlights nursing leaders who have demonstrated a commitment to patient care leadership and innovation in practice, policy, research, education, and theory. This interview profiles Karen Hill, DNP, RN, NEA-BC, FACHE, FAAN, chief operating officer and chief nursing officer of Baptist Health in Lexington, Kentucky, and editor-in-chief of the Journal of Nursing Administration.

Water Quality of Hills Water, Supply Water and RO Water Machine at Ulu Yam Selangor

Science.gov (United States)

Ngadiman, N.; ‘I Bahari, N.; Kaamin, M.; Hamid, N. B.; Mokhtar, M.; Sahat, S.

2016-07-01

The rapid development resulted in the deterioration of the quality of drinking water in Malaysia. Recognizing the importance of water quality, new alternatives for drinking water such as mineral water processing from reverse osmosis (RO) machine become more popular. Hence, the demand for mineral water, natural spring water or water from the hills or mountains rose lately. More consumers believed the quality of these spring water better than other source of drinking water. However, the quality of all the drinking water sources is to meet the required quality standard. Therefore, this paper aims to measure the quality of the waters from hills, from RO machine and the water supply in Ulu Yam, Selangor Batang Kali, Malaysia. The water quality was determined based on following parameters: ammoniacal nitrogen (NH3), iron (Fe), turbidity (NTU) and pH. The results show that the water from hills has better quality compared to water supply and water from RO machine. The value of NH3 ranged from 0.03 mg/L- 0.67 mg/L; Fe was from 0.03mg/L - 0.12 mg/L, turbidity at 0.42 NTU - 0.88 NTU and pH is at 6.60 - 0.71. Based on the studied parameters, all three types of water are fit for drinking and have met the required national drinking water quality standard.

Preimplantation genetic diagnosis for mitochondrial DNA mutations: analysis of one blastomere suffices.

Science.gov (United States)

Sallevelt, Suzanne C E H; Dreesen, Joseph C F M; Coonen, Edith; Paulussen, Aimee D C; Hellebrekers, Debby M E I; de Die-Smulders, Christine E M; Smeets, Hubert J M; Lindsey, Patrick

2017-10-01

Preimplantation genetic diagnosis (PGD) is a reproductive strategy for mitochondrial DNA (mtDNA) mutation carriers, strongly reducing their risk of affected offspring. Embryos either without the mutation or with mutation load below the phenotypic threshold are transferred to the uterus. Because of incidental heteroplasmy deviations in single blastomere and the relatively limited data available, we so far preferred relying on two blastomeres rather than one. Considering the negative effect of a two-blastomere biopsy protocol compared with a single-blastomere biopsy protocol on live birth delivery rate, we re-evaluated the error rate in our current dataset. For the m.3243A>G mutation, sufficient embryos/blastomeres were available for a powerful analysis. The diagnostic error rate, defined as a potential false-negative result, based on a threshold of 15%, was determined in 294 single blastomeres analysed in 73 embryos of 9 female m.3243A>G mutation carriers. Only one out of 294 single blastomeres (0.34%) would have resulted in a false-negative diagnosis. False-positive diagnoses were not detected. Our findings support a single-blastomere biopsy PGD protocol for the m.3243A>G mutation as the diagnostic error rate is very low. As in the early preimplantation embryo no mtDNA replication seems to occur and the mtDNA is divided randomly among the daughter cells, we conclude this result to be independent of the specific mutation and therefore applicable to all mtDNA mutations. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

Environmental assessment for the Strategic Petroleum Reserve Big Hill facility storage of commercial crude oil project, Jefferson County, Texas

International Nuclear Information System (INIS)

1999-03-01

The Big Hill SPR facility located in Jefferson County, Texas has been a permitted operating crude oil storage site since 1986 with benign environmental impacts. However, Congress has not authorized crude oil purchases for the SPR since 1990, and six storage caverns at Big Hill are underutilized with 70 million barrels of available storage capacity. On February 17, 1999, the Secretary of Energy offered the 70 million barrels of available storage at Big Hill for commercial use. Interested commercial users would enter into storage contracts with DOE, and DOE would receive crude oil in lieu of dollars as rental fees. The site could potentially began to receive commercial oil in May 1999. This Environmental Assessment identified environmental changes that potentially would affect water usage, power usage, and air emissions. However, as the assessment indicates, changes would not occur to a major degree affecting the environment and no long-term short-term, cumulative or irreversible impacts have been identified

Extremely organic-rich coma of comet C/2010 G2 (Hill) during its outburst in 2012

International Nuclear Information System (INIS)

Kawakita, Hideyo; Kobayashi, Hitomi; Russo, Neil Dello; Vervack, Ron Jr.; Weaver, Harold A.; DiSanti, Mike A.; Opitom, Cyrielle; Jehin, Emmanuel; Manfroid, Jean; Gillon, Michael; Cochran, Anita L.; Harris, Walter M.; Bockelée-Morvan, Dominique; Biver, Nicolas; Crovisier, Jacques; McKay, Adam J.

2014-01-01

We performed high-dispersion near-infrared spectroscopic observations of comet C/2010 G2 (Hill) at 2.5 AU from the Sun using NIRSPEC (R ≈ 25,000) at the Keck II Telescope on UT 2012 January 9 and 10, about a week after an outburst had occurred. Over the two nights of our observations, prominent emission lines of CH 4 and C 2 H 6 , along with weaker emission lines of H 2 O, HCN, CH 3 OH, and CO were detected. The gas production rate of CO was comparable to that of H 2 O during the outburst. The mixing ratios of CO, HCN, CH 4 , C 2 H 6 , and CH 3 OH with respect to H 2 O were higher than those for normal comets by a factor of five or more. The enrichment of CO and CH 4 in comet Hill suggests that the sublimation of these hypervolatiles sustained the outburst of the comet. Some fraction of water in the inner coma might exist as icy grains that were likely ejected from nucleus by the sublimation of hypervolatiles. Mixing ratios of volatiles in comet Hill are indicative of the interstellar heritage without significant alteration in the solar nebula.

Natural radioactivity in soil samples of Yelagiri Hills, Tamil Nadu, India and the associated radiation hazards

International Nuclear Information System (INIS)

Ravisankar, R.; Chandrasekaran, A.; Vijayagopal, P.; Venkatraman, B.; Senthilkumar, G.; Eswaran, P.; Rajalakshmi, A.

2012-01-01

The natural radioactivity of soils at Yelagiri hills has been studied in this paper. The radioactivities of 25 samples have been measured with a NaI(Tl) detector. The radioactivity concentrations of 238 U, 232 Th and 40 K ranged from ≤2.17 to 53.23, 13.54 to 89.89 and from 625.09 to 2207.3 Bq kg −1 , respectively. The measured activity concentrations for these radionuclides were compared with world average activity of soil. The average activity concentration of 232 Th in the present study is 1.19 times higher than world median value while the activity of 238 U and 40 K is found to be lower. In order to evaluate the radiological hazard of the natural radioactivity, the radium equivalent activity Ra eq , the absorbed dose rate D R , the annual effective dose rate and the external hazard index (H ex ) have been calculated and compared with the internationally approved values. The study provides background radioactivity concentrations in Yelagiri hills. - Highlights: ► Soil radioactivity is used for base line data in future impact assessment. ► We report the results of radiation hazard parameters in soils of Yelagiri hills. ► The level of the natural radiation in the studied area does not exceed the norm.

Extremely organic-rich coma of comet C/2010 G2 (Hill) during its outburst in 2012

Energy Technology Data Exchange (ETDEWEB)

Kawakita, Hideyo; Kobayashi, Hitomi [Koyama Astronomical Observatory, Kyoto Sangyo University, Motoyama, Kamitamo, Kita, Kyoto 603-8555 (Japan); Russo, Neil Dello; Vervack, Ron Jr.; Weaver, Harold A. [The Johns Hopkins University Applied Physics Laboratory, Laurel, MD 20723-6099 (United States); DiSanti, Mike A. [Goddard Center for Astrobiology, NASA Goddard Space Flight Center, Greenbelt, MD 20771 (United States); Opitom, Cyrielle; Jehin, Emmanuel; Manfroid, Jean; Gillon, Michael [F. R. S.-FNRS, Institut d' Astrophysique et de Géophysique, Université de Liège, Allée du 6 août 17, B-4000 Liège (Belgium); Cochran, Anita L. [McDonald Observatory, 1 University Station C1402, Austin, TX 78712-0259 (United States); Harris, Walter M. [Department of Applied Sciences, University of California, One Shields Avenue, Davis, CA 95616 (United States); Bockelée-Morvan, Dominique; Biver, Nicolas; Crovisier, Jacques [LESIA, Observatoire de Paris, CNRS, UPMC, Université Paris-Diderot, 5 Place Jules Janssen, F-92195 Meudon (France); McKay, Adam J., E-mail: kawakthd@cc.kyoto-su.ac.jp [New Mexico State University, Las Cruces, NM 88001 (United States)

2014-06-20

We performed high-dispersion near-infrared spectroscopic observations of comet C/2010 G2 (Hill) at 2.5 AU from the Sun using NIRSPEC (R ≈ 25,000) at the Keck II Telescope on UT 2012 January 9 and 10, about a week after an outburst had occurred. Over the two nights of our observations, prominent emission lines of CH{sub 4} and C{sub 2}H{sub 6}, along with weaker emission lines of H{sub 2}O, HCN, CH{sub 3}OH, and CO were detected. The gas production rate of CO was comparable to that of H{sub 2}O during the outburst. The mixing ratios of CO, HCN, CH{sub 4}, C{sub 2}H{sub 6}, and CH{sub 3}OH with respect to H{sub 2}O were higher than those for normal comets by a factor of five or more. The enrichment of CO and CH{sub 4} in comet Hill suggests that the sublimation of these hypervolatiles sustained the outburst of the comet. Some fraction of water in the inner coma might exist as icy grains that were likely ejected from nucleus by the sublimation of hypervolatiles. Mixing ratios of volatiles in comet Hill are indicative of the interstellar heritage without significant alteration in the solar nebula.

Ancient genes establish stress-induced mutation as a hallmark of cancer.

Science.gov (United States)

Cisneros, Luis; Bussey, Kimberly J; Orr, Adam J; Miočević, Milica; Lineweaver, Charles H; Davies, Paul

2017-01-01

Cancer is sometimes depicted as a reversion to single cell behavior in cells adapted to live in a multicellular assembly. If this is the case, one would expect that mutation in cancer disrupts functional mechanisms that suppress cell-level traits detrimental to multicellularity. Such mechanisms should have evolved with or after the emergence of multicellularity. This leads to two related, but distinct hypotheses: 1) Somatic mutations in cancer will occur in genes that are younger than the emergence of multicellularity (1000 million years [MY]); and 2) genes that are frequently mutated in cancer and whose mutations are functionally important for the emergence of the cancer phenotype evolved within the past 1000 million years, and thus would exhibit an age distribution that is skewed to younger genes. In order to investigate these hypotheses we estimated the evolutionary ages of all human genes and then studied the probability of mutation and their biological function in relation to their age and genomic location for both normal germline and cancer contexts. We observed that under a model of uniform random mutation across the genome, controlled for gene size, genes less than 500 MY were more frequently mutated in both cases. Paradoxically, causal genes, defined in the COSMIC Cancer Gene Census, were depleted in this age group. When we used functional enrichment analysis to explain this unexpected result we discovered that COSMIC genes with recessive disease phenotypes were enriched for DNA repair and cell cycle control. The non-mutated genes in these pathways are orthologous to those underlying stress-induced mutation in bacteria, which results in the clustering of single nucleotide variations. COSMIC genes were less common in regions where the probability of observing mutational clusters is high, although they are approximately 2-fold more likely to harbor mutational clusters compared to other human genes. Our results suggest this ancient mutational response to

Evolutionary pattern of mutation in the factor IX genes of great apes: How does it compare to the pattern of recent germline mutation in patients with hemophilia B?

Energy Technology Data Exchange (ETDEWEB)

Grouse, L.H.; Ketterling, R.P.; Sommer, S.S. [Mayo Clinic/Foundation, Rochester, MN (United States)

1994-09-01

Most mutations causing hemophilia B have arisen within the past 150 years. By correcting for multiple biases, the underlying rates of spontaneous germline mutation have been estimated in the factor IX gene. From these rates, an underlying pattern of mutation has emerged. To determine if this pattern compares to a underlying pattern found in the great apes, sequence changes were determined in intronic regions of the factor IX gene. The following species were studied: Gorilla gorilla, Pan troglodytes (chimpanzee), Pongo pygmacus (orangutan) and Homo sapiens. Intronic sequences at least 200 bp from a splice junction were randomly chosen, amplified by cross-species PCR, and sequenced. These regions are expected to be subject to little if any selective pressure. Early diverged species of Old World monkeys were also studied to help determine the direction of mutational changes. A total of 62 sequence changes were observed. Initial data suggest that the average pattern since evolution of the great apes has a paucity of transitions at CpG dinucleotides and an excess of microinsertions to microdeletions when compared to the pattern observed in humans during the past 150 years (p<.05). A larger study is in progress to confirm these results.

Study of Four Common Mutations of Familial Mediterranean Fever in North-West of Iran

Directory of Open Access Journals (Sweden)

Abbas Karimi

2012-09-01

Full Text Available Background and Objectives : Familial Mediterranean Fever, an autosomal recessive disorder, is the most common and well known periodical fevers syndrome. Disease is mainly prevalent among non-Ashkenazi Jews, Arabs, Turks and Armenia. According to the geographical location of North-West of Iran, neighboring with two high risk FMF population (Turkey and Armenia, the prevalence of FMF in this region of Iran is not unlikely. The aim of this study was to estimate the carriers rate of FMF common mutations in healthy control people. Results can be potentially useful to estimate prevalence of disease.   Methods : Randomly 200 samples from healthy people [non-FMF] from North-West of Iran selected. After taking consent, DNA was extracted from blood samples of these groups. Then mutations were evaluated using ARMS-PCR and RFLP-PCR techniques.   Results : from 400 studied alleles, 44 and 7 mutant alleles were found for E148Q and V726A respectively. For 2 other mutations, no mutant alleles were found. The total allelic frequency for these four common mutations was 0.132. The carriers rate was 23.4%.   Conclusion : This study showed that E148Q has high mutation frequency relative to other mutations in North-West of Iran.

Period Determination of Binary Asteroid Targets Observed at Hunters Hill Observatory: May-September 2009

Science.gov (United States)

Higgins, David; Oey, Julian; Pravec, Petr

2011-01-01

Lightcurves for seven confirmed or possible binary asteroids were obtained at the Hunters Hill Observatory (HHO) and Leura Observatory from 2009 May through 2010 September: 1453 Fennia, 2501 Lohja, 3076 Garbor, 4029 Bridges, 5325 Silver, 6244 Okamoto, and (6265) 1985 TW3.

CH2M Hill Hanford Group Inc (CHG) Information Resource Management (IRM) Strategic Plan

Energy Technology Data Exchange (ETDEWEB)

NELSON, R.L.

2000-06-06

The CH2M HILL Hanford Group, Inc. (CHG), Information Resource Management Strategic Plan is the top-level planning document for applying information and information resource management to achieve the CHG mission for the management of the River Protection Project waste tank farm.

CH2M Hill Hanford Group Inc (CHG) Information Resource Management (IRM) Strategic Plan

International Nuclear Information System (INIS)

NELSON, R.L.

2000-01-01

The CH2M HILL Hanford Group, Inc. (CHG), Information Resource Management Strategic Plan is the top-level planning document for applying information and information resource management to achieve the CHG mission for the management of the River Protection Project waste tank farm

77 FR 10717 - Black Hills National Forest, Custer, South Dakota-Mountain Pine Beetle Response Project

Science.gov (United States)

2012-02-23

.... The predominant tree species on lands of all ownerships in the Black Hills is ponderosa pine (Pinus... drought the Forest has seen a dramatic increase in acreage burned by wildfires. In that period over 250...

The West Beverly Hills Lineament and Beverly Hills High School: Ethical Issues in Geo-Hazard Communication

Science.gov (United States)

Gath, Eldon; Gonzalez, Tania; Roe, Joe; Buchiarelli, Philip; Kenny, Miles

2014-05-01

Results of geotechnical studies for the Westside Subway were disclosed in a public hearing on Oct. 19, 2011, showing new "active faults" of the Santa Monica fault and the West Beverly Hills Lineament (WBHL), identified as a northern extension of the Newport-Inglewood fault. Presentations made spoke of the danger posed by these faults, the possibility of killing people, and how it was good news that these faults had been discovered now instead of later. The presentations were live and are now memorialized as YouTube videos, (http://www.youtube.com/watch?v=Omx2BTIpzAk and others). No faults had been physically exposed or observed by the study; the faults were all interpreted from cone penetrometer probes, supplemented by core borings and geophysical transects. Several of the WBHL faults traversed buildings of the Beverly Hills High School (BHHS), triggering the school district to geologically map and characterize these faults for future planning efforts, and to quantify risk to the students in the 1920's high school building. 5 exploratory trenches were excavated within the high school property, 12 cone penetrometers were pushed, and 26-cored borings were drilled. Geologic logging of the trenches and borings and interpretation of the CPT data failed to confirm the presence of the mapped WBHL faults, instead showing an unfaulted, 3° NE dipping sequence of mid-Pleistocene alluvial fan deposits conformably overlying an ~1 Ma marine sand. Using 14C, OSL, and soil pedology for stratigraphic dating, the BHHS site was cleared from fault rupture hazards and the WBHL was shown to be an erosional margin of Benedict Canyon, partially buttressed by 40-200 ka alluvial deposits from Benedict Wash. The consequence of the Westside Subway's active fault maps has been the unexpected expenditure of millions of dollars for emergency fault investigations at BHHS and several other private properties within a densely developed urban highrise environment. None of these studies have found

Deep learning of mutation-gene-drug relations from the literature.

Science.gov (United States)

Lee, Kyubum; Kim, Byounggun; Choi, Yonghwa; Kim, Sunkyu; Shin, Wonho; Lee, Sunwon; Park, Sungjoon; Kim, Seongsoon; Tan, Aik Choon; Kang, Jaewoo

2018-01-25

Molecular biomarkers that can predict drug efficacy in cancer patients are crucial components for the advancement of precision medicine. However, identifying these molecular biomarkers remains a laborious and challenging task. Next-generation sequencing of patients and preclinical models have increasingly led to the identification of novel gene-mutation-drug relations, and these results have been reported and published in the scientific literature. Here, we present two new computational methods that utilize all the PubMed articles as domain specific background knowledge to assist in the extraction and curation of gene-mutation-drug relations from the literature. The first method uses the Biomedical Entity Search Tool (BEST) scoring results as some of the features to train the machine learning classifiers. The second method uses not only the BEST scoring results, but also word vectors in a deep convolutional neural network model that are constructed from and trained on numerous documents such as PubMed abstracts and Google News articles. Using the features obtained from both the BEST search engine scores and word vectors, we extract mutation-gene and mutation-drug relations from the literature using machine learning classifiers such as random forest and deep convolutional neural networks. Our methods achieved better results compared with the state-of-the-art methods. We used our proposed features in a simple machine learning model, and obtained F1-scores of 0.96 and 0.82 for mutation-gene and mutation-drug relation classification, respectively. We also developed a deep learning classification model using convolutional neural networks, BEST scores, and the word embeddings that are pre-trained on PubMed or Google News data. Using deep learning, the classification accuracy improved, and F1-scores of 0.96 and 0.86 were obtained for the mutation-gene and mutation-drug relations, respectively. We believe that our computational methods described in this research could be

Report of Nagarjunasagar Racer Coluber bholanathi Sharma, 1976 (Squamata: Serpentes: Colubridae from the Gingee Hills, Tamil Nadu, India

Directory of Open Access Journals (Sweden)

U. Smart

2014-04-01

Full Text Available Since its initial description in 1976 from Nagarjuna Hills, Andhra Pradesh, the endemic Nagarjaunasagar Racer Coluber bholanathi has remained elusive for over 30 years, only to be re-discovered in 2012. Here, we report this rare snake from the Gingee Hills, Tamil Nadu, extending the known geographic range by 495km south of the type locality and 194km south-east of Thally, Tamil Nadu, its previously southernmost locality. We also provide comparative information consisting of locality data, morphology and color pattern for both the Nagarjunasagar Racer and a similar-looking species The Slender Racer.

Spectrum of mutations in homozygous familial hypercholesterolemia in India, with four novel mutations.

Science.gov (United States)

Setia, Nitika; Saxena, Renu; Arora, Anjali; Verma, Ishwar C

2016-12-01

Homozygous familial hypercholesterolemia (FH) is a rare but serious, inherited disorder of lipid metabolism characterized by very high total and LDL cholesterol levels from birth. It presents as cutaneous and tendon xanthomas since childhood, with or without cardiac involvement. FH is commonly caused by mutations in three genes, i.e. LDL receptor (LDLR), apolipoprotein B (ApoB) and PCSK9. We aimed to determine the spectrum of mutations in cases of homozygous FH in Asian Indians and evaluate if there was any similarity to the mutations observed in Caucasians. Sixteen homozygous FH subjects from eleven families were analyzed for mutations by Sanger sequencing. Large rearrangements in LDLR gene were evaluated by multiplex ligation probe dependent amplification (MLPA) technique. Ten mutations were observed in LDLR gene, of which four mutations were novel. No mutation was detected in ApoB gene and common PCSK9 mutation (p.D374Y). Fourteen cases had homozygous mutations; one had compound heterozygous mutation, while no mutation was detected in one clinically homozygous case. We report an interesting "Triple hit" case with features of homozygous FH. The spectrum of mutations in the Asian Indian population is quite heterogeneous. Of the mutations identified, 40% were novel. No mutation was observed in exons 3, 9 and 14 of LDLR gene, which are considered to be hot spots in studies done on Asian Indians in South Africa. Early detection followed by aggressive therapy, and cascade screening of extended families has been initiated to reduce the morbidity and mortality in these patients. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Comparative study of the inhibition produced by CMU (3-p-chlorophenyl-1. 1-dimethyl-urea) in barley leaves, on the photophosphorilation, photocarboxilation and hill reaction; Estudio comparativo de la inhibicion que produce el CMU sobre la fotogosforilacion, totocarboxilacion y reaccion de hill en cebada. (Hordeum vulgare L.)

Energy Technology Data Exchange (ETDEWEB)

Fernandez, J; Sancho, C

1977-07-01

The effect of different concentrations of CMU (from 10 {sup -}8 M to 10{sup -}3 H) on the photophosphorilation, photocarboxilation and Hill reaction was studied. CMU (Carbon-H labelled) was utilized to determine the concentration of CMU in leaf parenchyma. Photocarboxilation and photophosphorolation was sensible to concentrations less than 10{sup -}7 M. Hill reaction in isolated chloroplasts was sensible from concentrations of the order of 10{sup -}8 M. (Author) 50 refs.

Timing of the uv mutagenesis in yeast: a pedigree analysis of induced recessive mutation

International Nuclear Information System (INIS)

James, A.P.; Kilbey, B.J.

1977-01-01

The mechanism of uv-induced mutation in eukaryotes was studied in individual yeast cells by a procedure that combined pedigree analysis and tetrad analysis. The technique involved the induction of recessive lethals and semilethals in G1 diploid cells. Induced frequencies were 25 and 61% at survival levels of 90 and 77%, respectively. No evidence of gross chromosome aberrations was detected. Recessive mutations that affect only one strand or that affect both strands of the DNA molecule are induced much at random among a population of cells, and both types can occur within the same cell. However, the data confirm that two-strand mutations are in the majority after a low level of irradiation. The simplest explanation involves a mechanism whereby most mutations are fixed in both strands prior to the first round of post-irradiation DNA replication. The recessive mutational consequences of irradiation are exhausted at the conclusion of the first post-irradiation cell division, although dominant-lethal sectoring continues at a high level through the second post-irradiation division. It is concluded that pyrimidine dimers that persist to the second round of DNA replication are rare or ineffective

The timing of UV mutagenesis in yeast: a pedigree analysis of induced recessive mutation.

Science.gov (United States)

James, A P; Kilbey, B J

1977-10-01

The mechanism of UV-induced mutation in eukaryotes was studied in individual yeast cells by a procedure that combined pedigree analysis and tetrad analysis. The technique involved the induction of recessive lethals and semilethals in G1 diploid cells. Induced frequencies were 25 and 61 percent at survival levels of 90 and 77 percent, respectively. No evidence of gross chromosome aberrations was detected. Recessive mutations that affect only one strand or that affect both strands of the DNA molecule are induced much at random among a population of cells, and both types can occur within the same cell. However, the data confirm that two-strand mutations are in the majority after a low level of irradiation. The simplest explanation involves a mechanism whereby most mutations are fixed in both strands prior to the first round of post-irradiation DNA replication. The recessive mutational consequences of irradiation are exhausted at the conclusion of the first post-irradiation cell division, although dominant-lethal sectoring continues at a high level through the second post-irradiation division. It is concluded that pyrimidine dimers that persist to the second round of DNA replication are rare or ineffective.

Pervasive remagnetization of detrital zircon host rocks in the Jack Hills, Western Australia and implications for records of the early geodynamo

Science.gov (United States)

Weiss, Benjamin P.; Maloof, Adam C.; Tailby, Nicholas; Ramezani, Jahandar; Fu, Roger R.; Hanus, Veronica; Trail, Dustin; Bruce Watson, E.; Harrison, T. Mark; Bowring, Samuel A.; Kirschvink, Joseph L.; Swanson-Hysell, Nicholas L.; Coe, Robert S.

2015-11-01

It currently is unknown when Earth's dynamo magnetic field originated. Paleomagnetic studies indicate that a field with an intensity similar to that of the present day existed 3.5 billion years ago (Ga). Detrital zircon crystals found in the Jack Hills of Western Australia are some of the very few samples known to substantially predate this time. With crystallization ages ranging from 3.0-4.38 Ga, these zircons might preserve a record of the missing first billion years of Earth's magnetic field history. However, a key unknown is the age and origin of magnetization in the Jack Hills zircons. The identification of >3.9 Ga (i.e., Hadean) field records requires first establishing that the zircons have avoided remagnetization since being deposited in quartz-rich conglomerates at 2.65-3.05 Ga. To address this issue, we have conducted paleomagnetic conglomerate, baked contact, and fold tests in combination with U-Pb geochronology to establish the timing of the metamorphic and alteration events and the peak temperatures experienced by the zircon host rocks. These tests include the first conglomerate test directly on the Hadean-zircon bearing conglomerate at Erawandoo Hill. Although we observed little evidence for remagnetization by recent lightning strikes, we found that the Hadean zircon-bearing rocks and surrounding region have been pervasively remagnetized, with the final major overprinting likely due to thermal and/or aqueous effects from the emplacement of the Warakurna large igneous province at ∼1070 million years ago (Ma). Although localized regions of the Jack Hills might have escaped complete remagnetization, there currently is no robust evidence for pre-depositional (>3.0 Ga) magnetization in the Jack Hills detrital zircons.

Effect of Repeated Reading and Self-Directed Behavior on Reading Skills and Generalization of the Reading Skills of Third-Grade Hill Tribe Students.

Science.gov (United States)

Compan, Boonlert; Iamsupasit, Sompoch; Samuels, Jay

A study tested a method for developing reading fluency with third-grade Hill Tribe children in a welfare school in Chiang Mai, a city located in northern Thailand. Most of the students were bilingual, speaking their native tongues and Thai, their second language. Only 18.7% of the Hill Tribe population can read Thai, and many students fail to…

Characteristics of a Low-Sulfidation Epithermal Deposit in the River Reef Zone and the Watuputih Hill, the Poboya Gold Prospect, Central Sulawesi, Indonesia: Host Rocks and Hydrothermal Alteration

Directory of Open Access Journals (Sweden)

Syafrizal

2017-07-01

Full Text Available Systematic exploration has delineated significant gold mineralization in the River Reef Zone and the presence of a siliceous body at Watuputih Hill, which is a Poboya gold prospect in Central Sulawesi, Indonesia. The mineralization is hosted within the Palu Metamorphic Complex. The host rocks consist of granite, biotite gneiss, and biotite schist, which is intercalated by feldspar porphyroblastic biotite schist and amphibolitic schist. The X-ray fluorescence (XRF analysis of the granite and biotite gneiss suggests that the granitic rocks can be characterized as magnesian arc calc-alkaline rocks, with a weakly peraluminous composition. Alteration minerals were analyzed by a combination of petrographic and X-ray diffraction (XRD. In the River Reef Zone, the hydrothermal alteration zones can be sorted by their proximity to the primary fluid conduit and divided into inner, high-T, and low-T propylitic zones. In Watuputih Hill, the hydrothermal alteration can be divided into advanced argillic and argillic zones. The hydrothermal alteration assemblages indicated that the fluid was at a near-neutral pH in the River Reef Zone, whereas the fluid was acidic within Watuputih Hill. Because the hill is relatively distant from the River Reef Zone, the presence of these zones at Watuputih Hill may be indicative of another mineralization system beneath the hill.

A case study of butterfly road kills from Anaikatty Hills, Western Ghats, Tamil Nadu, India

Directory of Open Access Journals (Sweden)

R. K. Sony

2015-11-01

Full Text Available  Anaikatty Hills of the Western Ghats in Tamil Nadu witness the annual spectacle of mass movement of lakhs of butterflies.  The present paper examines the impact of vehicular traffic on this ‘butterfly migration’ through a survey of butterfly mortality along a road stretch in Anaikatty Hills.  A high rate of mortality due to road traffic was observed during the mass movement of butterflies.  One-hundred-and-thirty-five butterfly road kills belonging to three families, nine genera and 12 species were recorded during the study.  The proportion of nymphalid butterflies among the road kills (70% was very high compared to their respective share in the background population (39%, indicating a higher road mortality risk for nymphalids.  The conservation significance of the road traffic impact on butterfly assemblage and management options are discussed. 

Ten-year results of a ponderosa pine progeny test in the Black Hills

Science.gov (United States)

Wayne D. Shepperd; Sue E. McElderry

1986-01-01

Ten-year survival and growth of seedlings from 77 parent trees from throughout the Black Hills were compared, using a cluster-analysis technique. Five clusters were identified that account for most of the variability in survival and growth of the open-pollinated families. One cluster, containing 6 families, exhibited exceptional survival and growth. Another, containing...

The effect of a combined glenoid and Hill-Sachs defect on glenohumeral stability: a biomechanical cadaveric study using 3-dimensional modeling of 142 patients.

Science.gov (United States)

Arciero, Robert A; Parrino, Anthony; Bernhardson, Andrew S; Diaz-Doran, Vilmaris; Obopilwe, Elifho; Cote, Mark P; Golijanin, Petr; Mazzocca, Augustus D; Provencher, Matthew T

2015-06-01

Bone loss in anterior glenohumeral instability occurs on both the glenoid and the humerus; however, existing biomechanical studies have evaluated glenoid and humeral head defects in isolation. Thus, little is known about the combined effect of these bony lesions in a clinically relevant model on glenohumeral stability. The purpose of this study was to determine the biomechanical efficacy of a Bankart repair in the setting of bipolar (glenoid and humeral head) bone defects determined via computer-generated 3-dimensional (3D) modeling of 142 patients with recurrent anterior shoulder instability. The null hypothesis was that adding a bipolar bone defect will have no effect on glenohumeral stability after soft tissue Bankart repair. Controlled laboratory study. A total of 142 consecutive patients with recurrent anterior instability were analyzed with 3D computed tomography scans. Two Hill-Sachs lesions were selected on the basis of volumetric size representing the 25th percentile (0.87 cm(3); small) and 50th percentile (1.47 cm(3); medium) and printed in plastic resin with a 3D printer. A total of 21 cadaveric shoulders were evaluated on a custom shoulder-testing device permitting 6 degrees of freedom, and the force required to translate the humeral head anteriorly 10 mm at a rate of 2.0 mm/s with a compressive load of 50 N was determined at 60° of glenohumeral abduction and 60° of external rotation. All Bankart lesions were made sharply from the 2- to 6-o'clock positions for a right shoulder. Subsequent Bankart repair with transosseous tunnels using high-strength suture was performed. Hill-Sachs lesions were made in the cadaver utilizing a plastic mold from the exact replica off the 3D printer. Testing was conducted in the following sequence for each specimen: (1) intact, (2) posterior capsulotomy, (3) Bankart lesion, (4) Bankart repair, (5) Bankart lesion with 2-mm glenoid defect, (6) Bankart repair, (7) Bankart lesion with 2-mm glenoid defect and Hill-Sachs lesion

Feasibility, safety, and short-term efficacy of the laparoscopic Nissen-Hill hybrid repair.

Science.gov (United States)

Aye, Ralph W; Qureshi, Alia P; Wilshire, Candice L; Farivar, Alexander S; Vallières, Eric; Louie, Brian E

2016-02-01

A novel antireflux procedure combining laparoscopic Nissen fundoplication and Hill repair components was tested in 50 patients with paraesophageal hernia (PEH) and/or Barrett's esophagus (BE) because these two groups have been found to have a high rate of recurrence with conventional repairs. Patients with symptomatic PEH and/or non-dysplastic BE underwent repair. Quality of life (QOL) metrics, manometry, EGD, and pH testing were administered pre- and postoperatively. Fifty patients underwent repair. There was no mortality and four major complications. At 13-month follow-up, there was one (2%) clinical recurrence, and two (4%) asymptomatic fundus herniations. Mean DeMeester scores improved from 57.2 to 7.7 (p < 0.0001). Control of preoperative symptoms was achieved in 90% with 6% resumption of antisecretory medication. All QOL metrics improved significantly. The hybrid Nissen-Hill repair for patients with PEH and BE appears safe and clinically effective at short-term follow-up. It is hoped that the combined structural components may reduce the rate of recurrence compared to existing repairs.

Analogy in causal inference: rethinking Austin Bradford Hill's neglected consideration.

Science.gov (United States)

Weed, Douglas L

2018-05-01

The purpose of this article was to rethink and resurrect Austin Bradford Hill's "criterion" of analogy as an important consideration in causal inference. In epidemiology today, analogy is either completely ignored (e.g., in many textbooks), or equated with biologic plausibility or coherence, or aligned with the scientist's imagination. None of these examples, however, captures Hill's description of analogy. His words suggest that there may be something gained by contrasting two bodies of evidence, one from an established causal relationship, the other not. Coupled with developments in the methods of systematic assessments of evidence-including but not limited to meta-analysis-analogy can be restructured as a key component in causal inference. This new approach will require that a collection-a library-of known cases of causal inference (i.e., bodies of evidence involving established causal relationships) be developed. This library would likely include causal assessments by organizations such as the International Agency for Research on Cancer, the National Toxicology Program, and the United States Environmental Protection Agency. In addition, a process for describing key features of a causal relationship would need to be developed along with what will be considered paradigm cases of causation. Finally, it will be important to develop ways to objectively compare a "new" body of evidence with the relevant paradigm case of causation. Analogy, along with all other existing methods and causal considerations, may improve our ability to identify causal relationships. Copyright © 2018 Elsevier Inc. All rights reserved.

Habitat preferences of ground beetle (Coleoptera: Carabidae) species in the northern Black Hills of South Dakota.

Science.gov (United States)

Bergmann, David J; Brandenburg, Dylan; Petit, Samantha; Gabel, Mark

2012-10-01

Ground beetles (Coleoptera: Carabidae) are a major component of terrestrial invertebrate communities and have been used as bioindicators of habitat change and disturbance. The Black Hills of South Dakota is a small area with a high biodiversity, but the ground beetles of this region are little studied. The habitat preferences of ground beetles in the Black Hills are unknown, and baseline data must be collected if these beetles are to be used in the future as bioindicators. Ground beetles (Coleoptera: Carabidae) were collected from pitfall traps at two sites in each of five kinds of habitats (grassland, bur oak-ironwood forests, ponderosa pine-common juniper forests, aspen-pine forests, and a spruce forest) from which habitat structure characteristics and plant abundance data also were collected. In total, 27 species of ground beetles were identified. Although some species, such as Dicaelus sculptilis Say were found in most habitats, other species showed distinct habitat preferences: Poecilus lucublandus (Say) preferred oak forests, Pasimachus elongatus LeConte preferred grasslands, and Calathus ingratus Dejean preferred high-elevation aspen-pine forests. Pterostichus adstrictus Escholtz was found only in woodlands, and Carabus taedatus Say strictly in higher elevation (over 1,500 m) aspen or coniferous woods, and may represent relict populations of boreal species. Elevation, exposure to sunlight, and cover of woody plants strongly influence the structure of carabid communities in the Black Hills.

Characterization of a mutation commonly associated with persistent stuttering: evidence for a founder mutation

Science.gov (United States)

Fedyna, Alison; Drayna, Dennis; Kang, Changsoo

2010-01-01

Stuttering is a disorder which affects the fluency of speech. It has been shown to have high heritability, and has recently been linked to mutations in the GNPTAB gene. One such mutation, Glu1200Lys, has been repeatedly observed in unrelated families and individual cases. Eight unrelated individuals carrying this mutation were analyzed in an effort to distinguish whether these arise from repeated mutation at the same site, or whether they represent a founder mutation with a single origin. Results show that all 12 chromosomes carrying this mutation share a common haplotype in this region, indicating it is a founder mutation. Further analysis estimated the age of this allele to be ~572 generations. Construction of a cladogram tracing the mutation through our study sample also supports the founder mutation hypothesis. PMID:20944643

Farmers' laws and irrigation : water rights and dispute management in the hills of Nepal

NARCIS (Netherlands)

Poudel, R.

2000-01-01

The title of my Thesis is "Farmers' Laws and Irrigation: Water Rights and Dispute Management in the Hills of Nepal". This is based on a research I conducted in the Thulotar Kulo irrigation system in Nepal, during 1997 and 1998. Thulotar Kulo is a farmer-managed irrigation

Attacking Urban Poverty: The Role of the SNDT Women's University, Mumbai, India--The "Gilbert Hill Programme". Strategies of Education and Training for Disadvantaged Groups.

Science.gov (United States)

Kamath, M.; Udipi, S. A.; Varghese, M. A.

This study examined the role of the SNDT (formerly Shreemati Nathibai Damodar Thackersey) University in reducing poverty in the Gilbert Hill-Gamdevi Dongri area of Mumbai, India. The Gilbert Hill area accommodates around 1 million people, most of whom are migrants form other parts of India. The Department of Post-Graduate Studies and Research in…

The use of LANDSAT-1 imagery in mapping and managing soil and range resources in the Sand Hills region of Nebraska

Science.gov (United States)

Seevers, P. M. (Principal Investigator); Drew, J. V.

1976-01-01

The author has identified the following significant results. Evaluation of ERTS-1 imagery for the Sand Hills region of Nebraska has shown that the data can be used to effectively measure several parameters of inventory needs. (1) Vegetative biomass can be estimated with a high degree of confidence using computer compatable tape data. (2) Soils can be mapped to the subgroup level with high altitude aircraft color infrared photography and to the association level with multitemporal ERTS-1 imagery. (3) Water quality in Sand Hills lakes can be estimated utilizing computer compatable tape data. (4) Center pivot irrigation can be inventoried from satellite data and can be monitored regarding site selection and relative success of establishment from high altitude aircraft color infrared photography. (5) ERTS-1 data is of exceptional value in wide-area inventory of natural resource data in the Sand Hills region of Nebraska.

Chemistry of diagenetic features analyzed by ChemCam at Pahrump Hills, Gale crater, Mars

Science.gov (United States)

Nachon, Marion; Mangold, Nicolas; Forni, Olivier; Kah, Linda C.; Cousin, Agnes; Wiens, Roger C.; Anderson, Ryan; Blaney, Diana L.; Blank, Jen G.; Calef, Fred J.; Clegg, Samuel M.; Fabre, Cecile; Fisk, Martin R.; Gasnault, Olivier; Grotzinger, John P.; Kronyak, Rachel; Lanza, Nina L.; Lasue, Jeremie; Le Deit, Laetitia; Le Mouelic, Stephane; Maurice, Sylvestre; Meslin, Pierre-Yves; Oehler, D. Z.; Payre, Valerie; Rapin, William; Schroder, Susanne; Stack, Katherine M.; Sumner, Dawn

2017-01-01

The Curiosity rover's campaign at Pahrump Hills provides the first analyses of lower Mount Sharp strata. Here we report ChemCam elemental composition of a diverse assemblage of post-depositional features embedded in, or cross-cutting, the host rock. ChemCam results demonstrate their compositional diversity, especially compared to the surrounding host rock: (i) Dendritic aggregates and relief enhanced features, characterized by a magnesium enhancement and sulfur detection, and interpreted as Mg-sulfates; (ii) A localized observation that displays iron enrichment associated with sulfur, interpreted as Fe-sulfate; (iii) Dark raised ridges with varying Mg- and Ca-enriched compositions compared to host rock; (iv) Several dark-toned veins with calcium enhancement associated with fluorine detection, interpreted as fluorite veins. (v) Light-toned veins with enhanced calcium associated with sulfur detection, and interpreted as Ca-sulfates. The diversity of the Pahrump Hills diagenetic assemblage suggests a complex post-depositional history for fine-grained sediments for which the origin has been interpreted as fluvial and lacustrine. Assessment of the spatial and relative temporal distribution of these features shows that the Mg-sulfate features are predominant in the lower part of the section, suggesting local modification of the sediments by early diagenetic fluids. In contrast, light-toned Ca-sulfate veins occur in the whole section and cross-cut all other features. A relatively late stage shift in geochemical conditions could explain this observation. The Pahrump Hills diagenetic features have no equivalent compared to targets analyzed in other locations at Gale crater. Only the light-toned Ca-sulfate veins are present elsewhere, along Curiosity's path, suggesting they formed through a common late-stage process that occurred at over a broad area.

Spatial Distribution of Bactrocera dorsalis and Thaumatotibia leucotreta in Smallholder Avocado Orchards along Altitudinal Gradient of Taita Hills and Mount Kilimanjaro

Directory of Open Access Journals (Sweden)

James J. Odanga

2018-06-01

Full Text Available Avocado (Persea americana fruits are an important source of income and a nutritious food for small-scale growers and other stakeholders involved in farming along the Afrotropical highlands of Taita Hills and Mount Kilimanjaro in Kenya and Tanzania, respectively. Avocado fruits are infested by several insect pests, namely the Asian invasive fruit fly, Bactrocera dorsalis (Hendel (Diptera: Tephritidae, and the false codling moth, Thaumatotibia leucotreta Meyrick (Lepidoptera: Tortricidae. However, there is inadequate information on the distribution patterns of these pests in small-scale avocado cropping systems in the East African highlands. This study was initiated to generate a spatial distribution map of B. dorsalis and T. leucotreta in avocado orchards at Taita Hills and Mount Kilimanjaro in Kenya and Tanzania, respectively. The two pests were monitored by using their respective parapheromone lures for two years between August 2012 and July 2014. Fruit damage was assessed by computing the proportion of infested fruits for B. dorsalis, whereas the damage score was used for T. leucotreta. Our results indicated that the mean number of B. dorsalis per trap per day differed significantly across elevation, being highest in lowland zone for both Taita Hills (15.90 and Mount Kilimanjaro (24.45. Similarly, the percentage infestation of ground collected fruits by B. dorsalis varied with altitude, being lowest at highlands above 1500 m.a.s.l. (0.66% and 0.83% for Taita Hills and Mount Kilimanjaro, respectively. Conversely, the mean number of T. leucotreta did not vary with altitude in either study area. However, the damage score for T. leucotreta infestation was significantly lower in the highlands of both transects (7.0% and11.1% for Taita Hills and Mount Kilimanjaro, respectively. These findings describe spatial trends that are important in formulating strategies aimed at suppressing the populations of B. dorsalis and T. leucotreta in East African

High rate of mutation K103N causing resistance to nevirapine in Indian children with acquired immunodeficiency syndrome

Directory of Open Access Journals (Sweden)

Sehgal S

2008-01-01

Full Text Available In north India the number of paediatric cases with acquired immunodeficiency syndrome (AIDS is on the rise. Most drug combinations used for treatment of AIDS incorporate nevirapine, resistance to which develops very fast if given singly or because of unplanned interruptions. This paper investigates presence of mutations at codon 103 and codon 215 of the HIV pol gene causing resistance to nevirapine and zidovudine (AZT respectively in 25 children with AIDS. Mutations T215Y and K103N were detected by a nested cum amplification refractory mutation system polymerase chain reaction (ARMS PCR and the results were confirmed by direct sequencing in five randomly selected cases. Nineteen patients had received nevirapine containing regimen and six were drug naive. Mutation K103N was observed in 56% (14/25 of the children while mutation T215Y was found in none. Two of the six drug naοve children also showed K103N mutation. Thus, Indian children drug naοve or treated with nevirapine containing regimens show a high rate of mutation conferring resistance to nevirapine which calls for a judicious use of nevirapine both in antenatal and postnatal setting.

Miocene magmatism in the Bodie Hills volcanic field, California and Nevada: A long-lived eruptive center in the southern segment of the ancestral Cascades arc

Science.gov (United States)

John, David A.; du Bray, Edward A.; Blakely, Richard J.; Fleck, Robert J.; Vikre, Peter; Box, Stephen E.; Moring, Barry C.

2012-01-01

The Middle to Late Miocene Bodie Hills volcanic field is a >700 km2, long-lived (∼9 Ma) but episodic eruptive center in the southern segment of the ancestral Cascades arc north of Mono Lake (California, U.S.). It consists of ∼20 major eruptive units, including 4 trachyandesite stratovolcanoes emplaced along the margins of the field, and numerous, more centrally located silicic trachyandesite to rhyolite flow dome complexes. Bodie Hills volcanism was episodic with two peak periods of eruptive activity: an early period ca. 14.7–12.9 Ma that mostly formed trachyandesite stratovolcanoes and a later period between ca. 9.2 and 8.0 Ma dominated by large trachyandesite-dacite dome fields. A final period of small silicic dome emplacement occurred ca. 6 Ma. Aeromagnetic and gravity data suggest that many of the Miocene volcanoes have shallow plutonic roots that extend to depths ≥1–2 km below the surface, and much of the Bodie Hills may be underlain by low-density plutons presumably related to Miocene volcanism.Compositions of Bodie Hills volcanic rocks vary from ∼50 to 78 wt% SiO2, although rocks with Bodie Hills rocks are porphyritic, commonly containing 15–35 vol% phenocrysts of plagioclase, pyroxene, and hornblende ± biotite. The oldest eruptive units have the most mafic compositions, but volcanic rocks oscillated between mafic and intermediate to felsic compositions through time. Following a 2 Ma hiatus in volcanism, postsubduction rocks of the ca. 3.6–0.1 Ma, bimodal, high-K Aurora volcanic field erupted unconformably onto rocks of the Miocene Bodie Hills volcanic field.At the latitude of the Bodie Hills, subduction of the Farallon plate is inferred to have ended ca. 10 Ma, evolving to a transform plate margin. However, volcanism in the region continued until 8 Ma without an apparent change in rock composition or style of eruption. Equidimensional, polygenetic volcanoes and the absence of dike swarms suggest a low differential horizontal stress regime

Presence of a consensus DNA motif at nearby DNA sequence of the mutation susceptible CG nucleotides.

Science.gov (United States)

Chowdhury, Kaushik; Kumar, Suresh; Sharma, Tanu; Sharma, Ankit; Bhagat, Meenakshi; Kamai, Asangla; Ford, Bridget M; Asthana, Shailendra; Mandal, Chandi C

2018-01-10

Complexity in tissues affected by cancer arises from somatic mutations and epigenetic modifications in the genome. The mutation susceptible hotspots present within the genome indicate a non-random nature and/or a position specific selection of mutation. An association exists between the occurrence of mutations and epigenetic DNA methylation. This study is primarily aimed at determining mutation status, and identifying a signature for predicting mutation prone zones of tumor suppressor (TS) genes. Nearby sequences from the top five positions having a higher mutation frequency in each gene of 42 TS genes were selected from a cosmic database and were considered as mutation prone zones. The conserved motifs present in the mutation prone DNA fragments were identified. Molecular docking studies were done to determine putative interactions between the identified conserved motifs and enzyme methyltransferase DNMT1. Collective analysis of 42 TS genes found GC as the most commonly replaced and AT as the most commonly formed residues after mutation. Analysis of the top 5 mutated positions of each gene (210 DNA segments for 42 TS genes) identified that CG nucleotides of the amino acid codons (e.g., Arginine) are most susceptible to mutation, and found a consensus DNA "T/AGC/GAGGA/TG" sequence present in these mutation prone DNA segments. Similar to TS genes, analysis of 54 oncogenes not only found CG nucleotides of the amino acid Arg as the most susceptible to mutation, but also identified the presence of similar consensus DNA motifs in the mutation prone DNA fragments (270 DNA segments for 54 oncogenes) of oncogenes. Docking studies depicted that, upon binding of DNMT1 methylates to this consensus DNA motif (C residues of CpG islands), mutation was likely to occur. Thus, this study proposes that DNMT1 mediated methylation in chromosomal DNA may decrease if a foreign DNA segment containing this consensus sequence along with CG nucleotides is exogenously introduced to dividing

76 FR 3655 - Bunker Hill Groundwater Basin, Riverside-Corona Feeder Project, San Bernardino and Riverside...

Science.gov (United States)

2011-01-20

... proposed aquifer storage and recovery project, including new groundwater wells and a 28- mile water... reliability of Western's water supply through managed storage, extraction and distribution of local and... groundwater wells in the Bunker Hill Groundwater Basin, San Bernardino County, California. Existing recharge...

Cosmogenic evidence for limited local LGM glacial expansion, Denton Hills, Antarctica

Science.gov (United States)

Joy, Kurt; Fink, David; Storey, Bryan; De Pascale, Gregory P.; Quigley, Mark; Fujioka, Toshiyuki

2017-12-01

The geomorphology of the Denton Hills provides insight into the timing and magnitude of glacial retreats in a region of Antarctica isolated from the influence of the East Antarctic ice sheet. We present 26 Beryllium-10 surface exposure ages from a variety of glacial and lacustrine features in the Garwood and Miers valleys to document the glacial history of the area from 10 to 286 ka. Our data show that the cold-based Miers, Joyce and Garwood glaciers retreated little since their maximum positions at 37.2 ± 6.9 (1σ n = 4), 35.1 ± 1.5 (1σ, n = 3) and 35.6 ± 10.1 (1σ, n = 6) ka respectively. The similar timing of advance of all three glaciers and the lack of a significant glacial expansion during the global LGM suggests a local LGM for the Denton Hills between ca. 26 and 51 ka, with a mean age of 36.0 ± 7.5 (1σ, n = 13) ka. A second cohort of exposure ages provides constraints to the behaviour of Glacial Lake Trowbridge that formerly occupied Miers Valley in the late Pleistocene. These data show active modification of the landscape from ∼20 ka until the withdrawal of ice from the valley mouths, and deposition of Ross Sea Drift, at 10-14 ka.

Optimizing Linear Functions with Randomized Search Heuristics - The Robustness of Mutation

DEFF Research Database (Denmark)

Witt, Carsten

2012-01-01

The analysis of randomized search heuristics on classes of functions is fundamental for the understanding of the underlying stochastic process and the development of suitable proof techniques. Recently, remarkable progress has been made in bounding the expected optimization time of the simple (1...

Asylum nursing in the UK at the end of the Victorian era: Hill End Asylum.

Science.gov (United States)

Brimblecombe, N

2005-02-01

This paper explores aspects of asylum care at the beginning of the 20th century. Archival materials from Hill End, the Hertford County Asylum, provide a single historical case study. The study focuses on the methods and standards by which asylum nursing was monitored and also examines aspects of the origins and work life of the nursing staff. Standards of care were monitored by a number of official bodies visiting the asylum, whilst the medical superintendent's role focused on the supervision and disciplinary control of nursing staff. Evaluation reports at the time were largely favourable in relation to the care given in Hill End Asylum. However, the reports were based on the relatively limited expectations of the time: primarily relating to the cleanliness, quietness and lack of overt complaints regarding care from patients. Further measures reported related to: death rates, wet beds, numbers of staff dismissed, together with the use of mechanical restraints and seclusion. Nursing staff in the asylum were not normally recruited locally and frequently stayed for only short periods of time. Training provided was very limited at Hill End although a national nurse training scheme was well established by this time. The nursing issues important within the asylum were common to all asylums at the time, and some are still significant today. This paper provides an insight into the historical development of the mental health nursing profession in the UK and its relationship with the medical profession. It also provides evidence that current attempts to monitor the quality of care through clinical governance processes are far from new.

Karst and Caves of the Black Hills, South Dakota, USA; Karst y cuevas de las Black Hills, Dakota del Sur, EE.UU

Energy Technology Data Exchange (ETDEWEB)

Palmer, A. N.

2016-07-01

The caves of the Black Hills are located in Carboniferous limestone and dolomite of the Madison Formation in western South Dakota. The climate is semi-arid, and surface karst features are few. Entrances to known caves are rather small, and the two largest caves, Wind Cave and Jewel Cave, were discovered only in the late 1880s and in 1900, respectively. Intermittent exploration and mapping have been conducted by local volunteers, National Park Service staff, and the National Speleological Society. Jewel Cave, in Jewel Cave National Monument, contains 290 km of mapped passages; and Wind Cave, in Wind Cave National Park, contains 230 km. They are the third and sixth longest known caves in the world. (Author)

“A Threatened S anctuary”: Pachjiri Hill (Bolivia and its Preservation as Intangible Cultural Heritage by UNESCO

Directory of Open Access Journals (Sweden)

Gerardo Fernández Juárez

2014-11-01

Full Text Available This article analyzes the unwanted consequences of the potential ‘revalorization’ and touristic exploitation of a hill in the Bolivian Titicaca highlands which is endowed with sacred significance. For local Aymara communities, Pachjiri hill is a full-scale sanctuary whose ceremonial altars have a role not only in the formation of yatiris (ritual specialists, but also in healing, plant growing, and cattle breeding. As argued in the article, proposals to implement uncontrolled tourist access will bring destruction to this intangible cultural heritage, which has so much relevance and prestige for neighbouring Aymara communities. The question that the article tries to answer is: till what extent should the commercial promotion of intangible cultural heritage (advocated by unesco be put before this heritage’s preservation?

Relating past land-use, topography, and forest dynamics in the Illinois Ozark hills

Science.gov (United States)

Saskia van de Gevel; Trevor B. Ozier; Charles M. Ruffner; John W. Groninger

2003-01-01

Trail of Tears State Forest is a 5,200 acre tract in the Illinois Ozark Hills and represents one of the largest blocks of contiguous forest in the lower Midwest. A highly dissected terrain with long, narrow ridges that fall away sharply on either side characterizes the area. The forest cover is a mosaic of oak-hickory approaching "old growth" condition...

Vinařická hora Hill Cenozoic Composite Volcano, Central Bohemia: Geochemical Contraints

Czech Academy of Sciences Publication Activity Database

Řanda, Zdeněk; Novák, Jiří Karel; Balogh, K.; Frána, Jaroslav; Kučera, Jan; Ulrych, Jaromír

2003-01-01

Roč. 15, - (2003), s. 126 ISSN 1210-9606. [International Conference HIBSCH 2002 Symposium. Teplá near Třebenice, 03.06.2002-08.06.2002] R&D Projects: GA AV ČR IAA3048201 Institutional research plan: CEZ:AV0Z3013912; CEZ:AV0Z1048901 Keywords : Bohemian massif * Vinařická hora Hill * geochemistry Subject RIV: DD - Geochemistry

Mountain pine beetle-killed trees as snags in Black Hills ponderosa pine stands

Science.gov (United States)

J. M. Schmid; S. A. Mata; W. C. Schaupp

2009-01-01

Mountain pine beetle-killed ponderosa pine trees in three stands of different stocking levels near Bear Mountain in the Black Hills National Forest were surveyed over a 5-year period to determine how long they persisted as unbroken snags. Rate of breakage varied during the first 5 years after MPB infestation: only one tree broke during the first 2 years in the three...

Sensitivity of subject-specific models to Hill muscle-tendon model parameters in simulations of gait

NARCIS (Netherlands)

Carbone, V.; Krogt, M.M. van der; Koopman, H.F.J.M.; Verdonschot, N.J.

2016-01-01

Subject-specific musculoskeletal (MS) models of the lower extremity are essential for applications such as predicting the effects of orthopedic surgery. We performed an extensive sensitivity analysis to assess the effects of potential errors in Hill muscle-tendon (MT) model parameters for each of

Sensitivity of subject-specific models to Hill muscle-tendon model parameters in simulations of gait

NARCIS (Netherlands)

Carbone, Vincenzo; van der Krogt, Marjolein; Koopman, Hubertus F.J.M.; Verdonschot, Nicolaas Jacobus Joseph

2016-01-01

Subject-specific musculoskeletal (MS) models of the lower extremity are essential for applications such as predicting the effects of orthopedic surgery. We performed an extensive sensitivity analysis to assess the effects of potential errors in Hill muscle–tendon (MT) model parameters for each of

Motivations of female Black Hills deer hunters

Science.gov (United States)

Gigliotti, Larry M.; Covelli Metcalf, Elizabeth

2016-01-01

State fish and wildlife agencies are particularly interested in attracting female participation because of the potential to offset declining participation in hunting. Understanding female hunters’ motivations will be critical for designing effective recruitment and retention programs for women hunters. Although female participation in hunting is increasing, males still outnumber females by about tenfold. Gender differences in deer hunters were explored by comparing ratings of eight motivations (social, nature, excitement, meat, challenge, trophy, extra hunting opportunity, and solitude). Hunter types were defined by hunters’ selection of the most important motivation for why they like Black Hills deer hunting. Overall, females and males were relatively similar in their ratings of the eight motivations, and we found 85% gender similarity in the selection of the most important motivation. Women were slightly more motivated by the food aspect of the hunt while men placed slightly more value on the hunt as a sporting activity.

Development of the Coles Hill Uranium Deposit with Sustainability as a Cornerstone

International Nuclear Information System (INIS)

Wales, P.; Rood, C.C.

2009-01-01

Uranium mining has not been very active in much of the world for the past 30 years. With the nuclear renaissance, the uranium mining industry has undergone a renaissance as well. There are a handful of uranium mining companies that have been operating since the last uranium boom that are taking forward thinking approaches and retrofitting their businesses to approach mining in a more sustainable manner. However, with the nuclear renaissance, there are hundreds of juniors in the mix that are ripe for implementing sustainable practices in their operations from the beginning. The Coles Hill uranium deposit site in Pittsylvania County is on land that has been owned by the families living there for generations (some as far back as the 1780's). Virginia Uranium Inc. (VUI) owns the Coles Hill uranium deposit. Concern for the community's progress and respect for the environment are deeply ingrained in VUI values. VUI's business decisions are guided by their core values which are expressed in seven guiding principles. This paper will present an initial approach to sustainability that is incorporated into a company's operations from its inception, an approach that is the only option from the perspective of the owners of VUI. (authors)

Yield Evaluation of Nutrient-rich Potato Clones in High Hill of Nepal

Directory of Open Access Journals (Sweden)

Binod Prasad Luitel

2017-05-01

Full Text Available A study was conducted to evaluate the yield of nutrient-rich potato clones in high-hill districts: Dolakha and Jumla of Nepal during the years 2013 and 2014, respectively. Fourteen potato clones were tested as on-station and on-farm experiments at both districts, and those fourteen clones were compared to ‘Lady Rosita’ and ‘Jumli Local’ respectively as the check varieties in the first year experiment, 2013. Eight promising clones were selected from the first year experiment, and were evaluated and compared with same local varieties in the consecutive year, 2014. Two clones namely; CIP 395112.32 (19.3 tha-1 and CIP 393073.179 (17.8 tha-1 exhibited superior marketable tuber yield than that of ‘Lady Rosita’(14.2 tha-1 in Dolakha and five CIP clones namely; 395112.32 (25.5 tha-1, 393073.179 (22.5 tha-1, 394611.112 (20.9 tha-1, 390478.9 (19.9 tha-1 and 395017.229 (17.0 tha-1 showed higher marketable tuber yield than ‘Jumli Local’(14.5 tha-1. Based on two years’ phenotypic and tuber yield result, clones CIP 395112.32 and CIP 393073.179 are recommended to potato growers at high hills of Nepal for commercial cultivation.

Surface and Flow Field Measurements on the FAITH Hill Model

Science.gov (United States)

Bell, James H.; Heineck, James T.; Zilliac, Gregory; Mehta, Rabindra D.; Long, Kurtis R.

2012-01-01

A series of experimental tests, using both qualitative and quantitative techniques, were conducted to characterize both surface and off-surface flow characteristics of an axisymmetric, modified-cosine-shaped, wall-mounted hill named "FAITH" (Fundamental Aero Investigates The Hill). Two separate models were employed: a 6" high, 18" base diameter machined aluminum model that was used for wind tunnel tests and a smaller scale (2" high, 6" base diameter) sintered nylon version that was used in the water channel facility. Wind tunnel and water channel tests were conducted at mean test section speeds of 165 fps (Reynolds Number based on height = 500,000) and 0.1 fps (Reynolds Number of 1000), respectively. The ratio of model height to boundary later height was approximately 3 for both tests. Qualitative techniques that were employed to characterize the complex flow included surface oil flow visualization for the wind tunnel tests, and dye injection for the water channel tests. Quantitative techniques that were employed to characterize the flow included Cobra Probe to determine point-wise steady and unsteady 3D velocities, Particle Image Velocimetry (PIV) to determine 3D velocities and turbulence statistics along specified planes, Pressure Sensitive Paint (PSP) to determine mean surface pressures, and Fringe Imaging Skin Friction (FISF) to determine surface skin friction (magnitude and direction). This initial report summarizes the experimental set-up, techniques used, data acquired and describes some details of the dataset that is being constructed for use by other researchers, especially the CFD community. Subsequent reports will discuss the data and their interpretation in more detail

Deletion mutations of bacteriophage

International Nuclear Information System (INIS)

Ryo, Yeikou

1975-01-01

Resolution of mutation mechanism with structural changes of DNA was discussed through the studies using bacteriophage lambda. One of deletion mutations inductions of phage lambda is the irradiation of ultraviolet ray. It is not clear if the inductions are caused by errors in reparation of ultraviolet-induced damage or by the activation of int gene. Because the effective site of int gene lies within the regions unnecessary for existing, it is considered that int gene is connected to deletion mutations induction. A certain system using prophage complementarity enables to detect deletion mutations at essential hereditary sites and to solve the relations of deletion mutations with other recombination system, DNA reproduction and repairment system. Duplication and multiplication of hereditary elements were discussed. If lambda deletion mutations of the system, which can control recombination, reproduction and repairment of added DNA, are constructed, mutations mechanism with great changes of DNA structure can be solved by phage lambda. (Ichikawa, K.)

A site specific model and analysis of the neutral somatic mutation rate in whole-genome cancer data.

Science.gov (United States)

Bertl, Johanna; Guo, Qianyun; Juul, Malene; Besenbacher, Søren; Nielsen, Morten Muhlig; Hornshøj, Henrik; Pedersen, Jakob Skou; Hobolth, Asger

2018-04-19

Detailed modelling of the neutral mutational process in cancer cells is crucial for identifying driver mutations and understanding the mutational mechanisms that act during cancer development. The neutral mutational process is very complex: whole-genome analyses have revealed that the mutation rate differs between cancer types, between patients and along the genome depending on the genetic and epigenetic context. Therefore, methods that predict the number of different types of mutations in regions or specific genomic elements must consider local genomic explanatory variables. A major drawback of most methods is the need to average the explanatory variables across the entire region or genomic element. This procedure is particularly problematic if the explanatory variable varies dramatically in the element under consideration. To take into account the fine scale of the explanatory variables, we model the probabilities of different types of mutations for each position in the genome by multinomial logistic regression. We analyse 505 cancer genomes from 14 different cancer types and compare the performance in predicting mutation rate for both regional based models and site-specific models. We show that for 1000 randomly selected genomic positions, the site-specific model predicts the mutation rate much better than regional based models. We use a forward selection procedure to identify the most important explanatory variables. The procedure identifies site-specific conservation (phyloP), replication timing, and expression level as the best predictors for the mutation rate. Finally, our model confirms and quantifies certain well-known mutational signatures. We find that our site-specific multinomial regression model outperforms the regional based models. The possibility of including genomic variables on different scales and patient specific variables makes it a versatile framework for studying different mutational mechanisms. Our model can serve as the neutral null model

Calreticulin Mutations in Myeloproliferative Neoplasms

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Noa Lavi

2014-10-01

Full Text Available With the discovery of the JAK2V617F mutation in patients with Philadelphia chromosome-negative (Ph− myeloproliferative neoplasms (MPNs in 2005, major advances have been made in the diagnosis of MPNs, in understanding of their pathogenesis involving the JAK/STAT pathway, and finally in the development of novel therapies targeting this pathway. Nevertheless, it remains unknown which mutations exist in approximately one-third of patients with non-mutated JAK2 or MPL essential thrombocythemia (ET and primary myelofibrosis (PMF. At the end of 2013, two studies identified recurrent mutations in the gene encoding calreticulin (CALR using whole-exome sequencing. These mutations were revealed in the majority of ET and PMF patients with non-mutated JAK2 or MPL but not in polycythemia vera patients. Somatic 52-bp deletions (type 1 mutations and recurrent 5-bp insertions (type 2 mutations in exon 9 of the CALR gene (the last exon encoding the C-terminal amino acids of the protein calreticulin were detected and found always to generate frameshift mutations. All detected mutant calreticulin proteins shared a novel amino acid sequence at the C-terminal. Mutations in CALR are acquired early in the clonal history of the disease, and they cause activation of JAK/STAT signaling. The CALR mutations are the second most frequent mutations in Ph− MPN patients after the JAK2V617F mutation, and their detection has significantly improved the diagnostic approach for ET and PMF. The characteristics of the CALR mutations as well as their diagnostic, clinical, and pathogenesis implications are discussed in this review.

Quantifying rockfall risk on roads in the Port Hills, Christchurch, New Zealand

Science.gov (United States)

Unterrader, Stefan; Fuchs, Sven

2016-04-01

The Canterbury earthquake sequence starting on 22 September 2010 triggered widespread mass movements in the Port Hills area of Christchurch, the largest agglomeration of New Zealand's South Island. The MW 6.2 Christchurch earthquake of 22 February 2011 in particular generated the largest ground motions ever recorded in New Zealand and as a result initiated several thousands of rockfalls. Over 6,000 boulders were released and mapped shortly after the event. The risk from rockfall to residents in the Port Hills was quantitatively assessed by the regulatory authorities in order to develop an adjusted land zoning policy. Apart from damaging residential buildings many of these boulders also hit several road sections across the Port Hills. Due to the inherent differences between identifying hazard and risk to people in static structures and in moving objects, a recently carried out risk assessment of rockfall was limited to exposed properties. However, given the importance of local road infrastructure for commuter traffic, local risk management strategies would clearly benefit from quantifying the threat of boulders endangering traffic lines. For this study, existing datasets describing the hazard including recently estimated frequency-magnitude bands for earthquakes and non-seismic triggering events, boulder production rates, boulder size distribution and associated run-out distances, were used. These data were provided by the Christchurch City Council's (CCC) GIS web service. A digital layer of the local road network as well as a detailed dataset of traffic counts was used for GIS analysis, and the probability of individuals being hit by boulders was calculated for each road segment that intersects one or more rockfall hazard zones. Finally, risk was computed. The method applied follows a state-of-the-art approach in risk assessment which is generally based on the risk equation defining risk as the probability of occurrence of an event times the expected loss. More

Lead dust in Broken Hill homes: effect of remediation on indoor lead levels.

Science.gov (United States)

Boreland, F; Lyle, D M

2006-02-01

This study was undertaken to determine whether home remediation effectively reduced indoor lead levels in Broken Hill, a long-established silver-lead-zinc mining town in outback Australia. A before-after study of the effect of home remediation on indoor lead levels was embedded into a randomized controlled trial of the effectiveness of remediation for reducing elevated blood lead levels in young children. Moist towelettes were used to measure lead loading (microg/m2) on internal windowsills and internal and entry floors of 98 homes; samples were collected before, immediately after, and 2, 4, 6, 8, and 10 months after remediation. Data were log(10) transformed for the analysis. Remediation reduced average indoor lead levels by approximately 50%, and lead levels remained low for the duration of the follow-up period (10 months). The greatest gains were made in homes with the highest initial lead levels; homes with low preremediation lead levels showed little or no benefit. Before remediation, homes located in areas with high soil lead levels or with "poor" dust proofing had higher lead levels than those in areas with lower soil lead levels or with "medium" or "good" dust proofing; these relative differences remained after remediation. There was no evidence that lead loading was reduced by an increased opportunity to become aware of lead issues. We conclude that remediation is an effective strategy for reducing the lead exposure of children living in homes with high indoor lead levels.

A Preliminary Study on the Measurement of Sediment Concentration in Hill-Slope Runoff with an Electrolyte Tracer

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Xiaonan Shi Fan Zhang

2012-01-01

Full Text Available Sediment concentration in hill-slope runoff is an important index for soil erosion. Developing a reliable and portable measuring system of sediment concentration is a core issue for soil and water conservation study, especially for the Tibetan Plateau under unfavorable climate and terrain conditions for field investigation. Challenges include uneven distribution of sediment across a runoff section as well as difficulty in detecting a wide range of particle sizes. An electrolyte tracer, with the advantage of uniform distribution and its widely used electric-conductivity sensor, can avoid the problems of direct measurement of sediment. A new measurement method of sediment concentration in runoff with an electrolyte tracer is proposed based on a premise that sediment concentration is closely correlated with hydrodynamic dispersion coefficient of solute in runoff. In this study, an experiment system of hill-slope runoff with an electrolyte tracer and sediments is first designed. Second, two model parameters in the advective-dispersive equation of solute transport, flow velocity and diffusion coefficient, are inversely estimated by calibrating the observed concentrations of an electrolyte tracer. And third, the relationship between sediment concentrations and hydrodynamic dispersion coefficients are defined through specified regression. As a result, a measurement system of sediment concentration in hill-slope runoff with an electrolyte tracer is primarily established by integrating the relationship of variables, experiment system, and model theory.

Assessing Interval Estimation Methods for Hill Model Parameters in a High-Throughput Screening Context (IVIVE meeting)

Science.gov (United States)

The Hill model of concentration-response is ubiquitous in toxicology, perhaps because its parameters directly relate to biologically significant metrics of toxicity such as efficacy and potency. Point estimates of these parameters obtained through least squares regression or maxi...

A note on the Mandible of Aceratherium Acutirostratum (Deraniyagala) from Moruaret hill, Turkana district, Kenya

NARCIS (Netherlands)

Hooijer, D.A.

1968-01-01

The genus and species Turkanatherium acutirostratus was proposed by Deraniyagala (1951) for a skull, without the mandible, collected by Dr. H. B. S. Cooke, a member of the Wendell-Phillips Expedition to Africa in 1948, at Moruaret Hill (or Moruorot) near Losodok (or Lothidok) in the Turkana

Geology of the Fox Hills Formation (late Cretaceous) in the Williston Basin of North Dakota, with reference to uranium potential. Report of investigation No. 55

International Nuclear Information System (INIS)

Cvancara, A.M.

1976-01-01

The Fox Hills Formation is a marine and brackish sequence of primarily medium and fine clastics within the Late Cretaceous Montana Group. In the Williston basin of North Dakota, four members (in ascending order) are recognized: Trail City, Timber Lake, Iron Lightning (with Bullhead and Colgate lithofacies), and Linton. The Fox Hills conformably overlies the Pierre Shale and conformably and disconformably underlies and interfingers with the Hell Creek Formation; it occurs in about the western two-thirds of the state. The geology of the Fox Hills Formation in North Dakota, and the stratigraphy of which is based on previous surface information and recent subsurface data, are summarized, and its potential for uranium is evaluated

Guidelines for Equal Treatment of the Sexes in McGraw-Hill Book Company Publications.

Science.gov (United States)

McGraw-Hill Book Co., New York, NY.

Intended primarily for use in writing and editing teaching materials, reference works, and nonfiction works in general, these guidelines have been compiled to alert authors and McGraw-Hill Book Company staff members both to the problems of sex discrimination and to various solutions. In addition, the guidelines reveal ways in which males and…

Exact Markov chain and approximate diffusion solution for haploid genetic drift with one-way mutation.

Science.gov (United States)

Hössjer, Ola; Tyvand, Peder A; Miloh, Touvia

2016-02-01

The classical Kimura solution of the diffusion equation is investigated for a haploid random mating (Wright-Fisher) model, with one-way mutations and initial-value specified by the founder population. The validity of the transient diffusion solution is checked by exact Markov chain computations, using a Jordan decomposition of the transition matrix. The conclusion is that the one-way diffusion model mostly works well, although the rate of convergence depends on the initial allele frequency and the mutation rate. The diffusion approximation is poor for mutation rates so low that the non-fixation boundary is regular. When this happens we perturb the diffusion solution around the non-fixation boundary and obtain a more accurate approximation that takes quasi-fixation of the mutant allele into account. The main application is to quantify how fast a specific genetic variant of the infinite alleles model is lost. We also discuss extensions of the quasi-fixation approach to other models with small mutation rates. Copyright © 2015 Elsevier Inc. All rights reserved.

Molecular nature of X-ray-induced mutations compared with that of spontaneous ones in human c-hprt gene integrated into mammalian chromosomal DNA

International Nuclear Information System (INIS)

Kimura, Hiroshi; Kato, Takesi.

1992-01-01

X-ray-induced mutations were analysed at molecular levels in comparison with spontaneous mutations. Altered sequences were determined tentatively of 30 independent X-ray-induced mutations in a cDNA of the human hprt gene which was integrated into mammalian chromosome as a part of a shuttle vector. Mutations consisted of base substitutions (37 %), frameshifts (27 %), deletions (27 %) and others (10 %). All these mutational events were distributed randomly over the gene without there being hot spots. The spectrum and distribution of X-ray-induced mutations resembled those of spontaneous mutations. Among base substitutions, transversions were predominant and base substitution mutations occurred more at A:T sites than at G:C sites, which is also the case in spontaneous mutations. Most of the frameshift and deletion mutations induced by X-rays, as well as those spontaneously arising, were characterized by the existence of short direct repeats of several identical bases in a row at the sites of the mutations. A slippage misalignment mechanism in replication well accounts for the generation of these classes of mutations. Judging from the data accumulated so far, it can be concluded that X-ray-induced mutations at molecular levels are similar to those spontaneously occurring. (author)

Column Experiments to Interpret Weathering in Columbia Hills

Science.gov (United States)

Hausrath, E. M.; Morris, R.V.; Ming, D.W.; Golden, D.C.; Galindo, C.; Sutter, B.

2009-01-01

Phosphate mobility has been postulated as an indicator of early aqueous activity on Mars. In addition, rock surfaces analyzed by the Mars Exploration Rover Spirit are consistent with the loss of a phosphate- containing mineral To interpret phosphate alteration behavior on Mars, we performed column dissolution experiments leaching the primary phases Durango fluorapatite, San Carlos olivine, and basalt glass (Stapafjell Volcano, courtesy of S. Gislason, University of Iceland) [3,4]) with acidic solutions. These phases were chosen to represent quickly dissolving phases likely present in Columbia Hills. Column dissolution experiments are closer to natural dissolution conditions than batch experiments, although they can be difficult to interpret. Acidic solutions were used because the leached layers on the surfaces of these rocks have been interpreted as resulting from acid solutions [5].

Water quality in vicinity of Fenton Hill Site, 1974

International Nuclear Information System (INIS)

Purtymun, W.D.; Adams, W.H.; Owens, J.W.

1975-09-01

The water quality at nine surface water stations, eight ground water stations, and the drilling operations at the Fenton Hill Site have been studied as a measure of the environmental impact of the Los Alamos Scientific Laboratory geothermal experimental studies in the Jemez Mountains. Surface water quality in the Jemez River drainage area is affected by the quality of the inflow from thermal and mineral springs. Ground water discharges from the Cenozoic Volcanics are similar in chemical quality. Water in the main zone of saturation penetrated by test hole GT-2 is highly mineralized, whereas water in the lower section of the hole, which is in granite, contains a higher concentration of uranium

Taurus Hill Observatory Scientific Observations for Pulkova Observatory during the 2016-2017 Season

Science.gov (United States)

Hentunen, V.-P.; Haukka, H.; Heikkinen, E.; Salmi, T.; Juutilainen, J.

2017-09-01

Taurus Hill Observatory (THO), observatory code A95, is an amateur observatory located in Varkaus, Finland. The observatory is maintained by the local astronomical association Warkauden Kassiopeia. THO research team has observed and measured various stellar objects and phenomena. Observatory has mainly focused on exoplanet light curve measurements, observing the gamma rays burst, supernova discoveries and monitoring. We also do long term monitoring projects.

Large-scale thinning, ponderosa pine, and mountain pine beetle in the Black Hills, USA

Science.gov (United States)

Jose F. Negron; Kurt K. Allen; Angie Ambourn; Blaine Cook; Kenneth Marchand

2017-01-01

Mountain pine beetle (Dendroctonus ponderosae Hopkins) (MPB), can cause extensive ponderosa pine (Pinus ponderosa Dougl. ex Laws.) mortality in the Black Hills of South Dakota and Wyoming, USA. Lower tree densities have been associated with reduced MPB-caused tree mortality, but few studies have reported on large-scale thinning and most data come from small plots that...

Feeding ecology of Merriam's turkeys (Meleagris gallopavo merriami) in the Black Hills, South Dakota

Science.gov (United States)

Mark A. Rumble; Stanley H. Anderson

1996-01-01

W e studied the feeding ecology of Merriam’s turkey (Meleagris gallopavo merriami) in the Black Hills, South Dakota, between 1986 and 1989. Adult birds consumed 78 kinds of food, of which four food categories constituted >79% of winter diets and six food categories constituted >75% of summer diets. Ponderosa pine (Pinus ponderosa) seeds were...

St. John's Harbour's South Side Hills internal development concept: going underground for multi-use space

Energy Technology Data Exchange (ETDEWEB)

Kierans, T W

1979-03-01

The advantages of underground locations for space saving, security, stability, environmental, aesthetic, and weather protection reasons with regard to power plants, municipal transport facilities, liquid fuel storage, national defence structures, public utilities and parking garages have been recognized for many years. The municipal, provincial, and federal authorities responsible for the city and seaport of St. John's, Newfoundland should consider the short-, medium-, and long-term benefits of the comprehensive concept proposed in this paper for the internal development of the South Side Hills - the rocky, sandstone hills that rise steeply to over 220 m between the crowded St. John's Harbour and Freshwater Bay. This proposal outlines a plan of excavation, space utilization, organization, financing, rock support, ventilation, water and energy supply, transportation arrangements and, not of least of all, the important use of the excavated rock to create a system of bottom-founded and floating concrete breakwaters at the entrance to Freshwater Bay. The proposed breakwaters would make it possible for St. John's to claim one of the finest deep-water harbors on the eastern seaboard of North America. Its location close to the North Atlantic main shipping lanes and on the threshold of the potential energy corridor to the Easten Arctic makes it an outstanding and natural location for such a facility. Other benefits include environmental protection and conservation of the natural beauty of the Hills and much improved utilization of the existing harbor. The employment opportunities and the potential for substantial city growth using existing untapped natural resources appear fully to merit the detailed economic cost studies that the concept now requires.

Compositional variation through time and space in Quaternary magmas of the Chyulu Hills Volcanic Province, Kenya

Science.gov (United States)

Widom, E.; Kuentz, D. C.

2017-12-01

The Chyulu Hills Volcanic Province, located in southern Kenya >100 km east of the Kenya Rift Valley, has produced mafic, monogenetic eruptions throughout the Quaternary. The volcanic field is considered to be an off-rift manifestation of the East African Rift System, and is known for the significant compositional variability of its eruptive products, which range from nephelinites to basanites, alkali basalts, hawaiites, and orthopyroxene-normative subalkaline basalts [1]. Notably, erupted compositions vary systematically in time and space: Pleistocene volcanism, occurring in the northern Chyulu Hills, was characterized by highly silica-undersaturated magmas, whereas Holocene volcanism, restricted to the southern Chyulu Hills, is less silica-understaturated, consistent with a progressive decrease in depth and increase in degree of melting with time, from north to south [1]. Pronounced negative K anomalies, and enriched trace element and Sr-Nd-Pb isotope signatures have been attributed to a metasomatized, amphibole-bearing, sub-continental lithospheric mantle (SCLM) source [2]. Seismic evidence for a partially molten zone in the SCLM beneath this region [3] may be consistent with such an interpretation. We have analyzed Chyulu Hills samples for Os, Hf and high precision Pb isotopes to further evaluate the magma sources and petrogenetic processes leading to systematic compositional variation in time and space. Sr-Nd-Pb-Hf isotope systematics and strong negative correlations of 206Pb/204Pb and highly incompatible trace element ratios with SiO2 are consistent with the progression from a deeper, HIMU-type source to a shallower, EM-type source. Os isotope systematics, however, suggest a more complex relationship; although all samples are more radiogenic than primitive mantle, the least radiogenic values (similar to primitive OIB) are found in magmas with intermediate SiO2, and those with lower or higher SiO2 are more radiogenic. This may be explained by interaction

Detection of resistance mutations and CD4 slopes in individuals experiencing sustained virological failure

DEFF Research Database (Denmark)

Schultze, Anna; Paredes, Roger; Sabin, Caroline

2014-01-01

during the episode were included. Mutations were identified using the IAS-US (2013) list, and were presumed to be present from detection until the end of an episode. Multivariable linear mixed models with a random intercept and slope adjusted for age, baseline CD4 count, hepatitis C, drug type, RNA (log...... mutations on CD4 slopes in patients undergoing episodes of viral failure. MATERIALS AND METHODS: Patients from the EuroSIDA and UK CHIC cohorts undergoing at least one episode of virological failure (>3 consecutive RNA measurements >500 on ART) with at least three CD4 measurements and a resistance test......-scale), risk group and subtype were used to estimate CD4 slopes. Individual mutations with a population prevalence of >10% were tested for their effect on the CD4 slope. RESULTS: A total of 2731 patients experiencing a median of 1 (range 1-4) episodes were included in this analysis. The prevalence of any...

Systematic reconstruction of autism biology from massive genetic mutation profiles.

Science.gov (United States)

Luo, Weijun; Zhang, Chaolin; Jiang, Yong-Hui; Brouwer, Cory R

2018-04-01

Autism spectrum disorder (ASD) affects 1% of world population and has become a pressing medical and social problem worldwide. As a paradigmatic complex genetic disease, ASD has been intensively studied and thousands of gene mutations have been reported. Because these mutations rarely recur, it is difficult to (i) pinpoint the fewer disease-causing versus majority random events and (ii) replicate or verify independent studies. A coherent and systematic understanding of autism biology has not been achieved. We analyzed 3392 and 4792 autism-related mutations from two large-scale whole-exome studies across multiple resolution levels, that is, variants (single-nucleotide), genes (protein-coding unit), and pathways (molecular module). These mutations do not recur or replicate at the variant level, but significantly and increasingly do so at gene and pathway levels. Genetic association reveals a novel gene + pathway dual-hit model, where the mutation burden becomes less relevant. In multiple independent analyses, hundreds of variants or genes repeatedly converge to several canonical pathways, either novel or literature-supported. These pathways define recurrent and systematic ASD biology, distinct from previously reported gene groups or networks. They also present a catalog of novel ASD risk factors including 118 variants and 72 genes. At a subpathway level, most variants disrupt the pathway-related gene functions, and in the same gene, they tend to hit residues extremely close to each other and in the same domain. Multiple interacting variants spotlight key modules, including the cAMP (adenosine 3',5'-monophosphate) second-messenger system and mGluR (metabotropic glutamate receptor) signaling regulation by GRKs (G protein-coupled receptor kinases). At a superpathway level, distinct pathways further interconnect and converge to three biology themes: synaptic function, morphology, and plasticity.

High-resolution melting curve analysis for rapid detection of mutations in a Medaka TILLING library

Directory of Open Access Journals (Sweden)

Deguchi Tomonori

2010-09-01

Full Text Available Abstract Background During the last two decades, DNA sequencing has led to the identification of numerous genes in key species; however, in most cases, their functions are still unknown. In this situation, reverse genetics is the most suitable method to assign function to a gene. TILLING (Targeting Induced Local Lesions IN Genomes is a reverse-genetic strategy that combines random chemical mutagenesis with high-throughput discovery of the induced mutations in target genes. The method has been applied to a variety of plant and animal species. Screening of the induced mutations is the most important step in TILLING. Currently, direct sequencing or nuclease-mediated screening of heteroduplexes is widely used for detection of mutations in TILLING. Both methods are useful, but the costs are substantial and turnaround times are relatively long. Thus, there is a need for an alternative method that is of higher throughput and more cost effective. Results In this study, we developed a high resolution melting (HRM assay and evaluated its effectiveness for screening ENU-induced mutations in a medaka TILLING library. We had previously screened mutations in the p53 gene by direct sequencing. Therefore, we first tested the efficiency of the HRM assay by screening mutations in p53, which indicated that the HRM assay is as useful as direct sequencing. Next, we screened mutations in the atr and atm genes with the HRM assay. Nonsense mutations were identified in each gene, and the phenotypes of these nonsense mutants confirmed their loss-of-function nature. Conclusions These results demonstrate that the HRM assay is useful for screening mutations in TILLING. Furthermore, the phenotype of the obtained mutants indicates that medaka is an excellent animal model for investigating genome stability and gene function, especially when combined with TILLING.

Lichens of the Holy Hill orthodox sanctuary in Grabarka (NE Poland

Directory of Open Access Journals (Sweden)

Anna Matwiejuk

2013-12-01

Full Text Available The Holy Hill Grabarka is one of the most important orthodox sanctuaries in Poland. The sanctuary is situated in Podlasie region between Bug and Narew rivers. It grew in the shade of well developing (in the first centuries of the second millennium towns Mielnik and Drohiczyn. The most striking thing is that the church is surrounded by a forest of thousands of crosses brought by pilgrims. The study present 64 species of epiphytic, epixylic, epilythic and epigeic lichens. Among 64 lichen species 11 are considered to be threatened in Poland.

Kitybė Susan Hill novelėje ,,The Woman in Black“

OpenAIRE

Kučinskaitė, Martyna

2016-01-01

Otherness in the Novella by Susan Hill “The Woman in Black” The present BA paper considers the representation of otherness in Susan Hill’s horror novella The Woman in Black (1983). The novella’s story is set in the Victorian England where the main concerns are the ghost of Jennet Humfrye who haunts the village, Crythin Gifford, and the haunted Eel Marsh House. Whenever she is seen by someone in the village, or in the house she haunts, a child dies under mysterious circumstances. The present p...

Repair-resistant mutation in Neurospora

International Nuclear Information System (INIS)

Stadler, D.; Macleod, H.; Loo, M.

1987-01-01

Chronic UV treatment produces severalfold fewer mutations in Neurospora conidia than does the same total dose of acute UV. Experiments were designed to determine the conditions required for chronic UV mutagenesis. Measurement of the coincidence frequency for two independent mutations revealed the existence of a subset of cells which are mutable by chronic UV. Analysis of forward mutation at the mtr locus showed that the genetic alterations produced by chronic UV were virtually all point mutants, even though the assay system could detect alterations or deletions extending into neighboring genes. A significant fraction of the mutants produced by acute UV were multigenic deletions. The size of the dose-rate effect (acute UV mutation frequency divided by chronic UV mutation frequency) was compared for several different mutation assay systems. Forward mutations (recessive lethals and mtr) gave values ranging from four to nine. For events which were restricted to specific molecular sites (specific reversions and nonsense suppressor mutations), there was a wider range of dose-rate ratios. This suggests that chronic UV mutation may be restricted to certain molecular sequences or configurations

Mutation Analysis in Classical Phenylketonuria Patients Followed by Detecting Haplotypes Linked to Some PAH Mutations.

Science.gov (United States)

Dehghanian, Fatemeh; Silawi, Mohammad; Tabei, Seyed M B

2017-02-01

Deficiency of phenylalanine hydroxylase (PAH) enzyme and elevation of phenylalanine in body fluids cause phenylketonuria (PKU). The gold standard for confirming PKU and PAH deficiency is detecting causal mutations by direct sequencing of the coding exons and splicing involved sequences of the PAH gene. Furthermore, haplotype analysis could be considered as an auxiliary approach for detecting PKU causative mutations before direct sequencing of the PAH gene by making comparisons between prior detected mutation linked-haplotypes and new PKU case haplotypes with undetermined mutations. In this study, 13 unrelated classical PKU patients took part in the study detecting causative mutations. Mutations were identified by polymerase chain reaction (PCR) and direct sequencing in all patients. After that, haplotype analysis was performed by studying VNTR and PAHSTR markers (linked genetic markers of the PAH gene) through application of PCR and capillary electrophoresis (CE). Mutation analysis was performed successfully and the detected mutations were as follows: c.782G>A, c.754C>T, c.842C>G, c.113-115delTCT, c.688G>A, and c.696A>G. Additionally, PAHSTR/VNTR haplotypes were detected to discover haplotypes linked to each mutation. Mutation detection is the best approach for confirming PAH enzyme deficiency in PKU patients. Due to the relatively large size of the PAH gene and high cost of the direct sequencing in developing countries, haplotype analysis could be used before DNA sequencing and mutation detection for a faster and cheaper way via identifying probable mutated exons.

Trembling aspen response to a mixed-severity wildfire in the Black Hills, South Dakota, USA

Science.gov (United States)

Tara L. Keyser; Frederick W. Smith; Wayne D. Shepperd

2005-01-01

Trembling aspen (Populus tremuloides Michx.) regeneration dynamics including sprout production, growth, and clone size were measured to determine the effects of fire on small aspen clone persistence following a mixedseverity wildfire in the Black Hills, South Dakota. Four years postfire, 10 small, isolated aspen clones per low and high fire severity...

Mutation breeding in chickpea

International Nuclear Information System (INIS)

2009-01-01

Chickpea is an important food legume in Turkey. Turkey is one of the most important gene centers in the world for legumes. The most widely known characteristic of chickpea is that it is an important vegetable protein source used in human and animal nutrition. However, the dry grains of chickpea, has 2-3 times more protein than our traditional food of wheat. In addition, cheakpea is also energy source because of its high carbohydrate content. It is very rich in some vitamin and mineral basis. In the plant breeding, mutation induction has become an effective way of supplementing existing germplasm and improving cultivars. Many successful examples of mutation induction have proved that mutation breeding is an effective and important approach to food legume improvement. The induced mutation technique in chickpea has proved successful and good results have been attained. Realizing the potential of induced mutations, a mutation breeding programme was initiated at the Nuclear Agriculture Section of the Saraykoey Nuclear Research and Training Center in 1994. The purpose of the study was to obtain high yielding chickpea mutants with large seeds, good cooking quality and high protein content. Beside this some characters such as higher adaptation ability, tolerant to cold and drought, increased machinery harvest type, higher yield, resistant to diseases especially to antracnose and pest were investigated too. Parents varieties were ILC-482, AK-7114 and AKCIN-91 (9 % seed moisture content and germination percentage 98 %) in these experiments. The irradiation doses were 0 (control), 50, 100, 150, 200, 250, 300, 350, 400, 500 ve 600 Gy for greenhouse experiments and 0 (control), 50, 100, 150, 200, 250, 300, 350 ve 400 Gy for field experiments, respectively. One thousand seeds for per treatment were sown in the field for the M 1 . At maturity, 3500 single plants were harvested and 20 seeds were taken from each M 1 plant and planted in the following season. During plant growth

The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals

Directory of Open Access Journals (Sweden)

Galtier Nicolas

2009-03-01

Full Text Available Abstract Background During the last ten years, major advances have been made in characterizing and understanding the evolution of mitochondrial DNA, the most popular marker of molecular biodiversity. Several important results were recently reported using mammals as model organisms, including (i the absence of relationship between mitochondrial DNA diversity and life-history or ecological variables, (ii the absence of prominent adaptive selection, contrary to what was found in invertebrates, and (iii the unexpectedly large variation in neutral substitution rate among lineages, revealing a possible link with species maximal longevity. We propose to challenge these results thanks to the bird/mammal comparison. Direct estimates of population size are available in birds, and this group presents striking life-history trait differences with mammals (higher mass-specific metabolic rate and longevity. These properties make birds the ideal model to directly test for population size effects, and to discriminate between competing hypotheses about the causes of substitution rate variation. Results A phylogenetic analysis of cytochrome b third-codon position confirms that the mitochondrial DNA mutation rate is quite variable in birds, passerines being the fastest evolving order. On average, mitochondrial DNA evolves slower in birds than in mammals of similar body size. This result is in agreement with the longevity hypothesis, and contradicts the hypothesis of a metabolic rate-dependent mutation rate. Birds show no footprint of adaptive selection on cytochrome b evolutionary patterns, but no link between direct estimates of population size and cytochrome b diversity. The mutation rate is the best predictor we have of within-species mitochondrial diversity in birds. It partly explains the differences in mitochondrial DNA diversity patterns observed between mammals and birds, previously interpreted as reflecting Hill-Robertson interferences with the W

Hydrogeology of Two Areas of the Tug Hill Glacial-Drift Aquifer, Oswego County, New York

Science.gov (United States)

Miller, Todd S.; Bugliosi, Edward F.; Hetcher-Aguila, Kari K.; Eckhardt, David A.

2007-01-01

Two water-production systems, one for the Village of Pulaski and the other for the Villages of Sandy Creek and Lacona in Oswego County, New York, withdraw water from the Tug Hill glacial-drift aquifer, a regional sand and gravel aquifer along the western flank of the Tug Hill Plateau, and provide the sole source of water for these villages. As a result of concerns about contamination of the aquifer, two studies were conducted during 2001 to 2004, one for each water-production system, to refine the understanding of ground-water flow surrounding these water-production systems. Also, these studies were conducted to determine the cause of the discrepancy between ground-water ages estimated from previously constructed numerical ground-water-flow models for the Pulaski and Sandy Creek/Lacona well fields and the apparent ground-water ages determined using concentrations of tritium and chlorofluorocarbons. The Village of Pulaski withdrew 650,000 gallons per day in 2000 from four shallow, large-diameter, dug wells finished in glaciolacustrine deposits consisting of sand with some gravelly lenses 3 miles east of the village. Four 2-inch diameter test wells were installed upgradient from each production well, hydraulic heads were measured, and water samples collected and analyzed for physical properties, inorganic constituents, nutrients, bacteria, tritium, dissolved gases, and chlorofluorocarbons. Recharge to the Tug Hill glacial-drift aquifer is from precipitation directly over the aquifer and from upland sources in the eastern part of the recharge area, including (1) unchannelized runoff from till and bedrock hills east of the aquifer, (2) seepage to the aquifer from streams that drain the Tug Hill Plateau, (3) ground-water inflow from the till and bedrock on the adjoining Tug Hill Plateau. Water-quality data collected from four piezometers near the production wells in November 2003 indicated that the water is a calcium-bicarbonate type with iron concentrations that

Draft tube flow phenomena across the bulb turbine hill chart

International Nuclear Information System (INIS)

Duquesne, P; Fraser, R; Maciel, Y; Aeschlimann, V; Deschênes, C

2014-01-01

In the framework of the BulbT project launched by the Consortium on Hydraulic Machines and the LAMH (Hydraulic Machine Laboratory of Laval University) in 2011, an intensive campaign to identify flow phenomena in the draft tube of a model bulb turbine has been done. A special focus was put on the draft tube component since it has a particular importance for recuperation in low head turbines. Particular operating points were chosen to analyse flow phenomena in this component. For each of these operating points, power, efficiency and pressure were measured following the IEC 60193 standard. Visualizations, unsteady wall pressure and efficiency measurements were performed in this component. The unsteady wall pressure was monitored at seven locations in the draft tube. The frequency content of each pressure signal was analyzed in order to characterize the flow phenomena across the efficiency hill chart. Visualizations were recorded with a high speed camera using tufts and cavitation bubbles as markers. The predominant detected phenomena were mapped and categorized in relation to the efficiency hill charts obtained for three runner blade openings. At partial load, the vortex rope was detected and characterized. An inflection in the partial load efficiency curves was found to be related to complex vortex rope instabilities. For overload conditions, the efficiency curves present a sharp drop after the best efficiency point, corresponding to an inflection on the power curves. This break off is more severe towards the highest blade openings. It is correlated to a flow separation at the wall of the draft tube. Also, due to the separation occurring in these conditions, a hysteresis effect was observed on the efficiency curves

A new subspecies of Celastrus (Celastraceae from the Palni hills of South India

Directory of Open Access Journals (Sweden)

S. John Britto

2017-08-01

Full Text Available Celastrus paniculatus Willd. ssp. angladeanus S.J. Britto, B. Mani and S. Thomas new subspecies from the Palni hills, Western Ghats of Tamilnadu, South India is described and illustrated. The new ssp. is similar to Celastrus paniculatus ssp. aggregatus but differs in flame-coloured branchlets, terminal, erect and stiff panicles exceeding leaves, prominent gibbous and oblique capsules, flowers polygamous but predominantly pistillate and 3-seeded capsules.

A comparative study on the forming limit diagram prediction between Marciniak-Kuczynski model and modified maximum force criterion by using the evolving non-associated Hill48 plasticity model

Science.gov (United States)

Shen, Fuhui; Lian, Junhe; Münstermann, Sebastian

2018-05-01

Experimental and numerical investigations on the forming limit diagram (FLD) of a ferritic stainless steel were performed in this study. The FLD of this material was obtained by Nakajima tests. Both the Marciniak-Kuczynski (MK) model and the modified maximum force criterion (MMFC) were used for the theoretical prediction of the FLD. From the results of uniaxial tensile tests along different loading directions with respect to the rolling direction, strong anisotropic plastic behaviour was observed in the investigated steel. A recently proposed anisotropic evolving non-associated Hill48 (enHill48) plasticity model, which was developed from the conventional Hill48 model based on the non-associated flow rule with evolving anisotropic parameters, was adopted to describe the anisotropic hardening behaviour of the investigated material. In the previous study, the model was coupled with the MMFC for FLD prediction. In the current study, the enHill48 was further coupled with the MK model. By comparing the predicted forming limit curves with the experimental results, the influences of anisotropy in terms of flow rule and evolving features on the forming limit prediction were revealed and analysed. In addition, the forming limit predictive performances of the MK and the MMFC models in conjunction with the enHill48 plasticity model were compared and evaluated.

Measured resolved shear stresses and Bishop-Hill stress states in individual grains of austenitic stainless steel

DEFF Research Database (Denmark)

Juul, Nicolai Ytterdal; Oddershede, Jette; Beaudoin, Armand

2017-01-01

somewhat from the theoretical expectation. These deviations are found to originate from a larger tensile stress component than in the theoretical Bishop-Hill stress states and to be associated also with deviations from axisymmetric plastic strain. This conclusion was supported by finite-element crystal...

The Oenothera plastome mutator: effect of UV irradiation and nitroso-methyl urea on mutation frequencies

International Nuclear Information System (INIS)

Sears, B.B.; Sokalski, M.B.

1991-01-01

Oenothera plants homozygous for a recessive plastome mutator allele (pm) showed spontaneous mutation frequencies for plastome genes that are 200-fold higher than spontaneous levels. Mutations occurred at high frequencies in plants grown in the field, in a glasshouse, or as leaf tip cultures under fluorescent light, indicating that the plastome mutator activity is UV-independent. However, the chlorotic sectors became visible at an earlier stage of development when seedlings were irradiated, compared to seedlings that were not exposed to UV. These results imply that the rate of sorting-out was increased by the irradiation treatment, possibly due to a decrease in the effective number of multiplication-competent plastids, or a reduction in the extent of cytoplasmic mixing. Nitroso-methyl urea treatment of seeds had a dramatic effect on mutation frequency in both wild-type and plastome mutator samples. When the background mutation rates were low, the combination of the plastome mutator nucleus and the chemical mutagenesis treatment resulted in a synergistic effect, suggesting that the plastome mutator may involve a cpDNA repair pathway. (author)

Malnutrition Status Among Under-5 Children in a Hill Community of Nepal.

Science.gov (United States)

Gaurav, K; Poudel, I S; Bhattarai, S; Pradhan, P M S; Pokharel, P K

2014-01-01

Malnutrition, especially under nutrition puts children at increased risk of morbidity and mortality and remains a serious barrier in child growth, development and survival. This is a major public health problem among under- 5 children in Nepal particularly in rural areas. To assess the burden and contributing factors for malnutrition in hill community of Ilam district in eastern Nepal. A cross sectional study was conducted in rural hill communities of Ilam district, Nepal with a sample of 240 under- 5 children. Anthropometric measurements were used as per WHO guidelines to asses three nutritional status: Underweight, Stunting, and Wasting using descriptive statistics and chi square test was applied using SPSS 12.0 to assess social and predisposing factors. Seventeen percent of under- 5 children were moderately and 10.4 % were severely underweight. Similarly, 22.9%, and 17.5% were found to be moderately and severely stunted respectively. Less than 10% were found to be moderately and severely wasted. Older age group of children, education level of mother, not exclusive breast feeding practice had significant (p children were affected with stunting, underweight and wasting at the same time. Significant proportion of under - 5 children were malnourished in the communities of the hilly areas. The study unveiled the importance of literacy and exclusive breast feeding for the prevention of malnutrition in under- 5 children.

Mutations causative of familial hypercholesterolaemia

DEFF Research Database (Denmark)

Benn, Marianne; Watts, Gerald F; Tybjærg-Hansen, Anne

2016-01-01

causing mutations in 98 098 participants from the general population, the Copenhagen General Population Study. METHODS AND RESULTS: We genotyped for LDLR[W23X;W66G;W556S] and APOB[R3500Q] accounting for 38.7% of pathogenic FH mutations in Copenhagen. Clinical FH assessment excluded mutation information......-cholesterol concentration to discriminate between mutation carriers and non-carriers was 4.4 mmol/L. CONCLUSION: Familial hypercholesterolaemia-causing mutations are estimated to occur in 1:217 in the general population and are best identified by a definite or probable phenotypic diagnosis of FH based on the DLCN criteria....... The prevalence of the four FH mutations was 0.18% (1:565), suggesting a total prevalence of FH mutations of 0.46% (1:217). Using the Dutch Lipid Clinic Network (DLCN) criteria, odds ratios for an FH mutation were 439 (95% CI: 170-1 138) for definite FH, 90 (53-152) for probable FH, and 18 (13-25) for possible FH...

Accuracy of gastrocnemius muscles forces in walking and running goats predicted by one-element and two-element Hill-type models.

Science.gov (United States)

Lee, Sabrina S M; Arnold, Allison S; Miara, Maria de Boef; Biewener, Andrew A; Wakeling, James M

2013-09-03

Hill-type models are commonly used to estimate muscle forces during human and animal movement-yet the accuracy of the forces estimated during walking, running, and other tasks remains largely unknown. Further, most Hill-type models assume a single contractile element, despite evidence that faster and slower motor units, which have different activation-deactivation dynamics, may be independently or collectively excited. This study evaluated a novel, two-element Hill-type model with "differential" activation of fast and slow contractile elements. Model performance was assessed using a comprehensive data set (including measures of EMG intensity, fascicle length, and tendon force) collected from the gastrocnemius muscles of goats during locomotor experiments. Muscle forces predicted by the new two-element model were compared to the forces estimated using traditional one-element models and to the forces measured in vivo using tendon buckle transducers. Overall, the two-element model resulted in the best predictions of in vivo gastrocnemius force. The coefficient of determination, r(2), was up to 26.9% higher and the root mean square error, RMSE, was up to 37.4% lower for the two-element model than for the one-element models tested. All models captured salient features of the measured muscle force during walking, trotting, and galloping (r(2)=0.26-0.51), and all exhibited some errors (RMSE=9.63-32.2% of the maximum in vivo force). These comparisons provide important insight into the accuracy of Hill-type models. The results also show that incorporation of fast and slow contractile elements within muscle models can improve estimates of time-varying, whole muscle force during locomotor tasks. Copyright © 2013 Elsevier Ltd. All rights reserved.

Archaeological Sites Inventory in the Black Hills of the Pinon Canyon Maneuver Site, Las Animas County, Colorado

National Research Council Canada - National Science Library

Owens, Mark

2000-01-01

.... These tree-covered areas located adjacent to open plains, appear black on the horizon. This setting of open steppes and juxtaposed hills is found along the eastern portion of the Pinon Canyon Maneuver Site (PCMS), a U.S...

Combination of traditional mutation and metabolic engineering to enhance ansamitocin P-3 production in Actinosynnema pretiosum.

Science.gov (United States)

Du, Zhi-Qiang; Zhang, Yuan; Qian, Zhi-Gang; Xiao, Han; Zhong, Jian-Jiang

2017-12-01

Ansamitocin P-3 (AP-3) is a maytansinoid with its most compelling antitumor activity, however, the low production titer of AP-3 greatly restricts its wide commercial application. In this work, a combinatorial approach including random mutation and metabolic engineering was conducted to enhance AP-3 biosynthesis in Actinosynnema pretiosum. First, a mutant strain M was isolated by N-methyl-N'-nitro-N-nitrosoguanidine mutation, which could produce AP-3 almost threefold that of wild type (WT) in 48 deep-well plates. Then, by overexpressing key biosynthetic genes asmUdpg and asm13-17 in the M strain, a further 60% increase of AP-3 production in 250-ml shake flasks was achieved in the engineered strain M-asmUdpg:asm13-17 compared to the M strain, and its maximum AP-3 production reached 582.7 mg/L, which is the highest as ever reported. Both the gene transcription levels and intracellular intermediate concentrations in AP-3 biosynthesis pathway were significantly increased in the M and M-asmUdpg:asm13-17 during fermentation compared to the WT. The good fermentation performance of the engineered strain was also confirmed in a lab-scale bioreactor. This work demonstrated that combination of random mutation and metabolic engineering could promote AP-3 biosynthesis and might be helpful for increasing the production of other industrially important secondary metabolites. © 2017 Wiley Periodicals, Inc.

A novel mutation in CRYAB associated with autosomal dominant congenital nuclear cataract in a Chinese family.

Science.gov (United States)

Chen, Qiang; Ma, Junjie; Yan, Ming; Mothobi, Maneo Emily; Liu, Yuanyuan; Zheng, Fang

2009-07-10

To identify the genetic defects associated with autosomal dominant congenital nuclear cataract in a Chinese family. Clinical data were collected, and the phenotypes of the affected members in this family were recorded by slit-lamp photography. Genomic DNA was isolated from peripheral blood. Mutations were screened in cataract-associated candidate genes through polymerase chain reaction (PCR) analyses and sequencing. Structural models of the wild-type and mutant alphaB-crystallin were generated and analyzed by SWISS-MODEL. Mutation screening identified only one heterozygous G-->A transition at nucleotide 32 in the first exon of alphaB-crystallin (CRYAB), resulting in an amino acid change from arginine to histidine at codon 11 (R11H). This mutation segregated in all available affected family members but was not observed in any of the unaffected persons of the family. The putative mutation disrupted a restriction site for the enzyme, Fnu4HI, in the affected family members. The disruption, however, was not found in any of the randomly selected ophthalmologically normal individuals or in 40 unrelated senile cataract patients. Computer-assisted prediction suggested that this mutation affected the biochemical properties as well as the structure of alphaB-crystallin. These results supported the idea that the novel R11H mutation was responsible for the autosomal dominant nuclear congenital cataract in this pedigree.

Evaluating Bounds and Estimators for Constants of Random Polycrystals Composed of Orthotropic Elastic Materials

Energy Technology Data Exchange (ETDEWEB)

Berryman, J. G.

2012-03-01

While the well-known Voigt and Reuss (VR) bounds, and the Voigt-Reuss-Hill (VRH) elastic constant estimators for random polycrystals are all straightforwardly calculated once the elastic constants of anisotropic crystals are known, the Hashin-Shtrikman (HS) bounds and related self-consistent (SC) estimators for the same constants are, by comparison, more difficult to compute. Recent work has shown how to simplify (to some extent) these harder to compute HS bounds and SC estimators. An overview and analysis of a subsampling of these results is presented here with the main point being to show whether or not this extra work (i.e., in calculating both the HS bounds and the SC estimates) does provide added value since, in particular, the VRH estimators often do not fall within the HS bounds, while the SC estimators (for good reasons) have always been found to do so. The quantitative differences between the SC and the VRH estimators in the eight cases considered are often quite small however, being on the order of ±1%. These quantitative results hold true even though these polycrystal Voigt-Reuss-Hill estimators more typically (but not always) fall outside the Hashin-Shtrikman bounds, while the self-consistent estimators always fall inside (or on the boundaries of) these same bounds.

Studies on mutation breeding in sweet potato (Ipomoea batatas (L.) Lam.)

International Nuclear Information System (INIS)

Kukimura, H.; Kouyama, Y.

1982-01-01

Different genotypes were subjected to gamma rays and EMS to examine the effects on tuber skin colour mutation. Different mutation rates were obtained according to the genotypes. The gamma irradiation induced larger sector size of skin colour mutation than EMS. Gamma rays had an effect on inducing flowering in MV 1 which is utilized in cross breeding. Mutagenic treatment by gamma rays and EMS on the hybrid true seed which segregates in a Mendelian ratio for pigmentation in leaf, stem and tuber and for shape of leaf gave some bias to their segregation ratios. Effects of gamma-ray irradiation on quantitative characters, such as dry matter content and total sugar content in tubers, were also investigated in hybrid populations. The treatments enlarged genetic variations on both the characters, being more effective on total sugar content. Clonal progenies derived from mutagenic treatment by gamma rays and EI were investigated for their quantitative MV 4 -MV 6 characters (tuber yield, dry matter content and total sugar content) in MV 4 -MV 6 . Heritabilities in a broad sense and phenotypic variances were estimated from the measurements on derivative strains obtained by random selection from mutagenic treatment plots. Artificial selection was effective only for tuber yield. Mutant clones with short stem length decreased their tuber yield and vice versa. A few mutant clones were found to excel the originals in dry matter content and total sugar content. Some aspects of mutation breeding in sweet potato are also discussed

Mutator activity in Schizophyllum commune

Energy Technology Data Exchange (ETDEWEB)

Shneyour, Y.; Koltin, Y. (Tel Aviv Univ. (Israel). Dept. of Microbiology)

1983-01-01

A strain with an elevated level of spontaneous mutations and an especially high rate of reversion at a specific locus (pab/sup -/) was identified. The mutator trait is recessive. UV sensitivity and the absence of a UV-specific endonucleolytic activity were associated with the enhancement of the mutation rate in mutator strains. The endonuclease associated with the regulation of the mutation rate also acted on single-stranded DNA. The molecular weight of this enzyme is about 38,000 daltons.

Geospatial Modeling To Assess Geomorphological Risk For Relentless Shifting Cultivation In Garo Hills Of Meghalaya, North East India

Directory of Open Access Journals (Sweden)

Pramod Kumar Yadav

2013-12-01

Full Text Available Due to shifting cultivation, the overall structure and composition of ecological condition is affected, hence landscape study becomes important for maintaining ecological diversity and appropriate scientific planning of any area. Garo hills region of northeast India is suffering from Geomorphological risk like sheet erosion, landslide etc. due to the age old tradition of shifting cultivation in the fragile hill slopes aided by other anthropogenic activities. The present study was conducted to examine the role of shifting cultivation for deforestation and degradation with variant of slope and elevation to relate vegetation cover with slope and elevation in the Garo Hills landscape of Meghalaya using temporal remote sensing data of 1991, 2001 and 2010. It revealed that there is decrease in dense forest and open forest during the 1st decade while areas under dense forest and non-forest increased in 2nd decade. This increased forest area is confined in the high slopes, which are inaccessible. The study shows increase in shifting cultivation near-about double fold in high slope and more than a double fold in the high altitudinal area in last decade, which is negative sign in terms of Geomorphological protection. International Journal of Environment, Volume-2, Issue-1, Sep-Nov 2013, Pages 91-104 DOI: http://dx.doi.org/10.3126/ije.v2i1.9212

Mutation and premating isolation

Science.gov (United States)

Woodruff, R. C.; Thompson, J. N. Jr

2002-01-01

While premating isolation might be traceable to different genetic mechanisms in different species, evidence supports the idea that as few as one or two genes may often be sufficient to initiate isolation. Thus, new mutation can theoretically play a key role in the process. But it has long been thought that a new isolation mutation would fail, because there would be no other individuals for the isolation-mutation-carrier to mate with. We now realize that premeiotic mutations are very common and will yield a cluster of progeny carrying the same new mutant allele. In this paper, we discuss the evidence for genetically simple premating isolation barriers and the role that clusters of an isolation mutation may play in initiating allopatric, and even sympatric, species divisions.

Datasets on abundance of common blossom thrips and weather variables in small-scale avocado orchards at Taita Hills and Mount Kilimanjaro

Directory of Open Access Journals (Sweden)

James J. Odanga

2017-12-01

Full Text Available Avocado, Persea americana Miller (Lauraceae, is an important fruit crop cultivated by small-holder farmers along Afrotropical highlands of Taita Hills in South-eastern Kenya and Mount Kilimanjaro in Northern Tanzania. The small-holder farmers in these East African regions generate substantial food and cash from avocado fruits. However, the avocado crop is faced with challenges of infestation by insect pests such as the common blossom thrips (Frankliniella schultzei Trybom which feeds on pollen and floral tissue thereby reducing productivity of the trees. Moreover, there is no information describing distribution patterns of Frankliniella schultzei and associated weather in East African avocado orchards despite the fact that small-scale farming is dependent on rainfall. This article was, therefore, initiated to provide dataset on abundance of Frankliniella schultzei from the avocado plants that relates with monthly rainfall and air temperatures at Taita Hills and Mount Kilimanjaro. Frankliniella schultzei was collected using white coloured beating tray and camel brush whereas air temperatures (°C and rainfall (mm was recorded daily using automatic data loggers and rain gauge, respectively. The survey at the two transects commenced during peak flowering season of avocado crop in August up to end of harvesting period in July of the following year. Temporal datasets were generated by Kruskal-Wallis Chi-square test. Current temporal datasets presents strong baseline information specifically for Kenya and Tanzania government agencies to develop further agricultural strategies aimed at improving avocado farming within Taita Hills and Mount Kilimanjaro agro-ecosystems. Keywords: Frankliniella schultzei, Avocado, Weather variables, Taita Hills, Mount Kilimanjaro

The influence of light, stream gradient, and iron on Didymosphenia geminata bloom development in the Black Hills, South Dakota

Science.gov (United States)

James, Daniel A.; Mosel, Kyle; Chipps, Steven R.

2014-01-01

The aquatic nuisance species Didymosphenia geminata was first documented in Rapid Creek of South Dakota’s Black Hills during 2002. Since then, blooms have occurred primarily in a 39-km section of Rapid Creek while blooms were rarely observed in other Black Hills streams. In this study, we evaluated factors related to the presence and development of visible colonies of D. geminata in four streams of the Black Hills. At the watershed scale, stream gradient was negatively associated with the occurrence of D. geminata whereas stream width was positively related to D. geminata presence. At the stream scale, D. geminata coverage was inversely related to canopy coverage and iron concentration. At the local scale, shading by bridges virtually eliminated growth of D. geminata colonies under bridges. At all three scales, proxy measures of light such as stream width, canopy coverage, and bridge shading revealed that light availability was an important factor influencing the presence and coverage of D. geminata colonies. In general, streams that had relatively wide stream reaches (mean = 9.9 m), shallow gradients (mean = 0.22%), and little canopy cover (mean = 13%) were associated with D. geminata blooms. In addition, iron concentrations in streams with D. geminata colonies were lower than in streams without blooms.

Formulation of anisotropic Hill criteria for the description of an aluminium alloy behaviour during the channel die compression test

International Nuclear Information System (INIS)

Gavrus, A.; Francillette, H.

2007-01-01

During the last years the study of the plastic deformation modes and the anisotropic mechanical behaviour of aluminium alloys have been the subject of many investigations. This paper deals with a phenomenological identification of an anisotropic Hill constitutive equation of aluminium AU4G samples using a channel die compression device at room temperature. By considering the different possible orientations of the samples in the channel die device, three initial textures, named ND (normal direction Z), LD (longitudinal direction X) and TD (transverse direction Y), were defined with the corresponding stresses σND, σLD and σTD. To describe the anisotropy of the material, a quadratic Hill criteria is used. An Avrami type equation based on the mixture of the hardening and softening phenomena is used to describe variation of each stress component with the equivalent plastic strain. The identification of the parameters of the law is made using an identification software (OPTPAR) and a good correlation between the experimental stresses and computed ones is obtained. The variation of the Hill parameters with a proposed equivalent strain, describing the deformation history of the material, is analysed. Finally, using the expressions of F, G, H and N, the constitutive equation of the normal anisotropy in the plane XY is obtained

Mutation profiles of phenylketonuria in Quebec populations: Evidence of stratification and novel mutations

Energy Technology Data Exchange (ETDEWEB)

Rozen, R.; Mascisch, A.; Scriver, C.R. (McGill Univ., Montreal (Canada)); Lambert, M. (Hopital Ste-Justine, Montreal (Canada)); Laframboise, R. (Centre Hospitalier Universite Laval, Quebec (Canada))

1994-08-01

Independent phenylketonuria (PKU) chromosomes (n=109) representing 80% of a proband cohort in Quebec province carry 18 different identified mutations in 20 different mutation/haplotype combinations. The study reported here, the third in a series on Quebec populations, was done in the Montreal region and predominantly on French Canadians. It has identified three novel mutations (A309D, D338Y, and 1054/1055delG [352fs]) and one unusual mutation/RFLP haplotype combination (E280K on Hp 2). The relative frequencies and distribution of PKU mutations were then compared in three regions and population subsets (eastern Quebec, French Canadian; western Quebec, French Canadian; and Montreal, non-French Canadian). The distributions of the prevalent and rare mutations are nonrandom and provide evidence for genetic stratification. The latter and the presence of eight unusual mutation/haplotype combinations in Quebec families with European ancestries (the aforementioned four and M1V, 165T, S349P, and R408W on Hp 1) corroborate demographic and anthropologic evidence, from elsewhere, for different origins of French Canadians in eastern and western Quebec. 29 refs., 1 fig., 1 tab.

Effect of fire on the herpetofauna of the Koanaka Hills, Ngamiland, Botswana

OpenAIRE

Kennedy, Alicia; Marais, Johan; Bauer, Aaron; Lewis, Patrick; Thies, Monte

2012-01-01

Ngamiland is one of the most remote regions in Botswana, and its herpetofauna is largely under-surveyed. This study documents the herpetofauna of the Koanaka Hills (KH) in Ngamiland in 2009 following extensive fire destruction and compares it to the pre-fire herpetofauna collected in 2008. We also provide new records for the region for three amphibian and six reptile species, and document vouchers for two taxa that were sighted but not collected in 2008. During 2009, 14 reptile and three amph...

A Summary of the 1999-2002 Seasons of Archaeological Investigations at Pook's Hill, Cayo District, Belize

DEFF Research Database (Denmark)

Helmke, Christophe G.B.

2006-01-01

The following is a synopsis of the 1999 through 2002 seasons of archaeological investigations conducted at the site of Pook's Hill. The site's location and description precede an outline of the research objectives that have guided the investigations. Results of the first four seasons of investiga...

Efficient Detection of Copy Number Mutations in PMS2 Exons with a Close Homolog.

Science.gov (United States)

Herman, Daniel S; Smith, Christina; Liu, Chang; Vaughn, Cecily P; Palaniappan, Selvi; Pritchard, Colin C; Shirts, Brian H

2018-07-01

Detection of 3' PMS2 copy-number mutations that cause Lynch syndrome is difficult because of highly homologous pseudogenes. To improve the accuracy and efficiency of clinical screening for these mutations, we developed a new method to analyze standard capture-based, next-generation sequencing data to identify deletions and duplications in PMS2 exons 9 to 15. The approach captures sequences using PMS2 targets, maps sequences randomly among regions with equal mapping quality, counts reads aligned to homologous exons and introns, and flags read count ratios outside of empirically derived reference ranges. The method was trained on 1352 samples, including 8 known positives, and tested on 719 samples, including 17 known positives. Clinical implementation of the first version of this method detected new mutations in the training (N = 7) and test (N = 2) sets that had not been identified by our initial clinical testing pipeline. The described final method showed complete sensitivity in both sample sets and false-positive rates of 5% (training) and 7% (test), dramatically decreasing the number of cases needing additional mutation evaluation. This approach leveraged the differences between gene and pseudogene to distinguish between PMS2 and PMS2CL copy-number mutations. These methods enable efficient and sensitive Lynch syndrome screening for 3' PMS2 copy-number mutations and may be applied similarly to other genomic regions with highly homologous pseudogenes. Copyright © 2018 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

Geodynamic modelling of the Broken Hill mineralising system

International Nuclear Information System (INIS)

Hobbs, B.; Walshe, J.; Ord, A.; Zhang, Y.; Zhao, C.

1999-01-01

Full text: The origin of the Broken Hill ore body is the topic of considerable controversy and there are at least seven ore genesis models in vogue (Parr and Plimer, 1993). Unfortunately none of the data are definitive with respect to one model or another and progress in the area is hindered by protagonists adhering to their pet model by inventing processes that enable a problematic data set to fit their particular model. We attempt here to overcome some of these difficulties by adopting a very simplistic approach and assume that each data set is to be interpreted at face value with no attempt to distort the data so that it fits some predetermined philosophy. The data sets to be taken at face value are: (i) The carbon isotopic data which are ambiguous and can be taken to indicate either a source of carbon from organic sources and/or from deep crustal/mantle sources. (ii) The sulphur isotopic data which indicate a plutonic/hydrothermal source for the sulphur. (iii) The lead isotopic data which indicate a crustal source for the lead but perhaps with some mixing with a mantle source. (iv) The lead model age which indicates an age for the mineralisation ( 1675 Ma), 15 million years younger than the SHRIMP U-Pb ages for the host sediments (1690 Ma). However the errors are such that an origin synchronous with sedimentation is still possible. In the form of model constraints, we also assume that Broken Hill Type mineralisation is a true type, namely, Pb/Zn mineralisation that occurs in what are now amphibolite to granulite grades of metamorphism. This observation implies that the mineralisation is spatially and temporally associated with high grade metamorphism or that the site of mineralisation is associated with diagenesis or low grade metamorphism but is such that late in the geotectonic history that site is predestined to undergo high grade metamorphism. Since the only experimental data available on Pb/Zn solubilities involves oxidised fluids we are forced to develop

Better plants through mutations

International Nuclear Information System (INIS)

1988-01-01

This is a public relations film describing problems associated with the genetic improvement of crop plants through induced mutations. Mutations are the ultimate source of genetic variation in plants. Mutation induction is now established as a practical tool in plant breeding. The Joint FAO/IAEA Division and the IAEA's laboratory at Seibersdorf have supported research and practical implementation of mutation breeding of both seed propagated and vegetatively propagated plants. Plant biotechnology based on in vitro culture and recombinant DNA technology will make a further significant contribution to plant breeding

Petrology, composition, and age of intrusive rocks associated with the Quartz Hill molybdenite deposit, southeastern Alaska.

Science.gov (United States)

Hudson, T.; Smith, James G.; Elliott, R.L.

1979-01-01

A large porphyry molybdenum deposit (Quartz Hill deposit) was recently discovered in the heart of the Coast Range batholithic complex about 70 km E of Ketchikan, SE Alaska. Intrusive rocks associated with the mineral deposit form two composite epizonal to hypabyssal stocks and many dikes in country rocks. All observed metallization and alteration is within the Quartz Hill stock. Molybdenite forms fracture coatings and occurs in veins with quartz. Alteration is widespread and includes development of secondary quartz, pyrite, K-feldspar, biotite, white mica, chlorite, and zeolite. Field relations indicate that the stocks were emplaced after regional uplift and erosion of the Coast Range batholithic complex, and K-Ar data show that intrusion and alteration took place in late Oligocene time, about 27 to 30 Ma ago. Data from the Ketchikan quadrangle indicate that porphyry molybdenum metallization in the Coast Range batholithic complex is associated with regionally extensive but spotty, middle Tertiary or younger, felsic magmatism. -from Authors

Predictable Phenotypes of Antibiotic Resistance Mutations.

Science.gov (United States)

Knopp, M; Andersson, D I

2018-05-15

Antibiotic-resistant bacteria represent a major threat to our ability to treat bacterial infections. Two factors that determine the evolutionary success of antibiotic resistance mutations are their impact on resistance level and the fitness cost. Recent studies suggest that resistance mutations commonly show epistatic interactions, which would complicate predictions of their stability in bacterial populations. We analyzed 13 different chromosomal resistance mutations and 10 host strains of Salmonella enterica and Escherichia coli to address two main questions. (i) Are there epistatic interactions between different chromosomal resistance mutations? (ii) How does the strain background and genetic distance influence the effect of chromosomal resistance mutations on resistance and fitness? Our results show that the effects of combined resistance mutations on resistance and fitness are largely predictable and that epistasis remains rare even when up to four mutations were combined. Furthermore, a majority of the mutations, especially target alteration mutations, demonstrate strain-independent phenotypes across different species. This study extends our understanding of epistasis among resistance mutations and shows that interactions between different resistance mutations are often predictable from the characteristics of the individual mutations. IMPORTANCE The spread of antibiotic-resistant bacteria imposes an urgent threat to public health. The ability to forecast the evolutionary success of resistant mutants would help to combat dissemination of antibiotic resistance. Previous studies have shown that the phenotypic effects (fitness and resistance level) of resistance mutations can vary substantially depending on the genetic context in which they occur. We conducted a broad screen using many different resistance mutations and host strains to identify potential epistatic interactions between various types of resistance mutations and to determine the effect of strain

Revertant mutation releases confined lethal mutation, opening Pandora's box: a novel genetic pathogenesis.

Directory of Open Access Journals (Sweden)

Yasushi Ogawa

2014-05-01

Full Text Available When two mutations, one dominant pathogenic and the other "confining" nonsense, coexist in the same allele, theoretically, reversion of the latter may elicit a disease, like the opening of Pandora's box. However, cases of this hypothetical pathogenic mechanism have never been reported. We describe a lethal form of keratitis-ichthyosis-deafness (KID syndrome caused by the reversion of the GJB2 nonsense mutation p.Tyr136X that would otherwise have confined the effect of another dominant lethal mutation, p.Gly45Glu, in the same allele. The patient's mother had the identical misssense mutation which was confined by the nonsense mutation. The biological relationship between the parents and the child was confirmed by genotyping of 15 short tandem repeat loci. Haplotype analysis using 40 SNPs spanning the >39 kbp region surrounding the GJB2 gene and an extended SNP microarray analysis spanning 83,483 SNPs throughout chromosome 13 in the family showed that an allelic recombination event involving the maternal allele carrying the mutations generated the pathogenic allele unique to the patient, although the possibility of coincidental accumulation of spontaneous point mutations cannot be completely excluded. Previous reports and our mutation screening support that p.Gly45Glu is in complete linkage disequilibrium with p.Tyr136X in the Japanese population. Estimated from statisitics in the literature, there may be approximately 11,000 p.Gly45Glu carriers in the Japanese population who have this second-site confining mutation, which acts as natural genetic protection from the lethal disease. The reversion-triggered onset of the disesase shown in this study is a previously unreported genetic pathogenesis based on Mendelian inheritance.

Designing a protected area network for conservation planning in Jhum landscapes of Garo Hills, Meghalaya

Science.gov (United States)

A. Kumar; Bruce Marcot; G. Talukdar

2010-01-01

We studied vegetation and land cover characteristics within the existing array of protected areas (PAs) in South Garo Hills of Meghalaya, northeast India and introduce the concept of protected area network (PAN) and methods to determine linkages of forests among existing PAs. We describe and analyze potential elements of a PAN, including PAs, reserved forests,...

Neoarchean metamorphism recorded in high-precision Sm-Nd isotope systematics of garnets from the Jack Hills (Western Australia)

Science.gov (United States)

Eccles, K. A.; Baxter, E. F.; Mojzsis, S. J.; Marschall, H.; Williams, M. L.; Jercinovic, M. J.

2013-12-01

Studies of metasedimentary rocks from the Jack Hills, which host Earth's oldest known detrital minerals, have focused on zircon and occasionally monazite or xenotime, but no attention has been directed toward one of the most common mineral markers of metamorphism: garnet. Garnet can provide a record of the post-depositional, prograde metamorphic history of Archean metasedimentary rocks. Additionally, the use of a newly developed detrital garnet dating technique [1,2] may reveal information about pre-depositional metamorphism that could address lingering questions about the nature and timing of Earth's earliest tectonometamorphic events. Here we investigate garnet from the Jack Hills metasedimentary rocks to test whether they record in situ metamorphism or are a detrital relict of even older metamorphic events. We identified garnet in two bulk quartz-pebble conglomerate samples collected from the 'discovery' outcrop at Eranondoo Hill in the Jack Hills of Western Australia. Electron microprobe analyses of polished grains and SEM measurements of unpolished grain surfaces are consistent, revealing garnet composition indicative of a single generation/population of predominantly almandine-spessartine solid solution (~10-35% mole fraction spessartine). Compositional maps of garnet grains reveal little zoning and no discontinuities, most consistent with a single growth event. Dating Jack Hills' garnet via the Sm-Nd system is possible due to continued development of small sample analysis techniques, including running NdO+ TIMS analyses with Ta2O5 activator [3] permitting Ma for two point isochrons between clean garnet (Sm/Nd ≥ 1.0) and their leached inclusion populations [2]. Four grouped garnet grain separates from one sample yield preliminary dates of 2703.6×6.0Ma, 2612.4×6.0Ma, 2605.0×5.5Ma, and 2567.3×8.3Ma, while the second sample yielded a date of 2579.6×4.6 Ma (2σ). Compositional and geochronologic data indicate likely in situ garnet growth during a late

Observations of hybrid seismic events at Soufriere Hills Volcano, Montserrat: July 1995 to September 1996

Science.gov (United States)

White, R.A.; Miller, A.D.; Lynch, L.; Power, J.

1998-01-01

Swarms of small repetitive events with similar waveforms and magnitudes are often observed during the emplacement of lava domes. Over 300 000 such events were recorded in association with the emplacement of the lava dome at Soufriere Hills Volcano, Montserrat, from August 1995 through August 1996. These events originated Soufriere Hills Volcano, Montserrat, from August 1995 through August 1996. These events originated <2-3 km deep. They exhibited energy ranging over approximately 1.5-4.5 Hz and were broader band than typical long-period events. We term the events `hybrid' between long-period and volcano-tectonic. The events were more impulsive and broader band prior to, compared with during and after, periods of inferred increased magma flux rate. Individual swarms contained up to 10,000 events often exhibiting very similar magnitudes and waveforms throughout the swarm. Swarms lasted hours to weeks, during which inter-event intervals generally increased, then decreased, often several times. Long-duration swarms began about every two months starting in late September 1995. We speculate that the events were produced as the magma column degassed into adjacent cracks.

Sustainable Agriculture Evaluation for Red Soil Hill Region of Southeast China

Institute of Scientific and Technical Information of China (English)

ZHAO Qi-Guo; XU Meng-Jie

2004-01-01

Agricultural sustainability for economic development is important and a complex issue throughout the world; however,it is difficult to synthetically evaluate its use in the policy making process. The objective of this study was to evaluate sustainable agriculture in the red soil hill region of Southeast China through a newly proposed method combining four separate sub-systems: regional population (P), resource (R), environmental (E), and socio-economic (S). This new index system was proposed to appraise synthetically the agricultural sustainability of the red soil hill region from 1988 to 1996 with a two-step method assessing: a) the agricultural sustainability in each province independently and b) the relative sustainability of each province to the whole region. The first step only provided a development trend for each province based on its original situation, while the second step provided additional information on the comparative status of each province in agricultural development to the region as a whole. Higher index scores were found for the economy and resource categories denoting improvement. However, lower scores in the environment category indicated the improvement was achieved at the cost of deteriorating ecological surroundings due to an increasing population that demanded more from the agro-ecosystem and put heavier pressures on it. Results also showed that water and soil losses in this region were the major obstacles encountered in sustainable agriculture development. The assessment results were verified when compared with results from another method. This suggested that the new assessment system was reliable and credible in evaluating agricultural sustainability on a regional scale.

Hill-Sachs lesion location: does it play a role in engagement?

Energy Technology Data Exchange (ETDEWEB)

Gyftopoulos, Soterios; Wang, Annie; Babb, James [NYU Langone Medical Center, Department of Radiology, New York, NY (United States)

2015-08-15

To see if there is an association between engagement on physical examination (PE) and the location of the Hill-Sachs lesion (HSL) as assessed by the modified biceps angle. Sixty-two patients with a history of anterior shoulder dislocation, who underwent preoperative MRI and arthroscopy at our institution and were tested for engagement on PE, were collected. Two musculoskeletal radiologists reviewed the MR studies, noting the presence of an HSL and documenting the location of the HSL with the modified biceps angle. Statistical analysis included the Mann-Whitney (MW) test and ROC (receiver-operating characteristic) curve. Of 62 patients, there were 58 males and 4 females with a mean age of 30 (range 18-59 years). Twenty patients demonstrated engagement on PE, while 42 did not. All patients had evidence of an HSL on MRI and arthroscopy. The mean biceps angle for the engaging group was 151.5 ± 13.9 , and 142.4 ± 17.3 for the non-engaging group. The biceps angle was statistically significantly higher among patients who had engagement compared to those who did not (p = 0.027). Overall, diagnostic accuracy was highest for a biceps angle >149 , which resulted in a sensitivity of 70 % and specificity of 67 %. The modified biceps angle, as measured on MRI, was significantly higher in patients who demonstrated engagement on physical examination than in those who did not. This supports the theory that the location of the Hill-Sachs lesion may play a role in engagement and may be its most important characteristic when determining its significance. (orig.)

Comparative study of the inhibition produced by CMU (3-p-chlorophenyl-1. 1-dimethyl-urea) in barley leaves, on the photophosphorilation, photocarboxilation and hill reaction

International Nuclear Information System (INIS)

Fernandez, J.; Sancho, C.

1977-01-01

The effect of different concentrations of CMU (from 10 - 8 M to 10 - 3 H) on the photophosphorilation, photocarboxilation and Hill reaction was studied. CMU (Carbon-H labelled) was utilized to determine the concentration of CMU in leaf parenchyma. Photocarboxilation and photophosphorolation was sensible to concentrations less than 10 - 7 M. Hill reaction in isolated chloroplasts was sensible from concentrations of the order of 10 - 8 M. (Author) 50 refs

Targeted next-generation sequencing extends the phenotypic and mutational spectrums for EYS mutations.

Science.gov (United States)

Gu, Shun; Tian, Yuanyuan; Chen, Xue; Zhao, Chen

2016-01-01

We aim to determine genetic lesions with a phenotypic correlation in four Chinese families with autosomal recessive retinitis pigmentosa (RP). Medical histories were carefully reviewed. All patients received comprehensive ophthalmic evaluations. The next-generation sequencing (NGS) approach targeting a panel of 205 retinal disease-relevant genes and 15 candidate genes was selectively performed on probands from the four recruited families for mutation detection. Online predictive software and crystal structure modeling were also applied to test the potential pathogenic effects of identified mutations. Of the four families, two were diagnosed with RP sino pigmento (RPSP). Patients with RPSP claimed to have earlier RP age of onset but slower disease progression. Five mutations in the eyes shut homolog (EYS) gene, involving two novel (c.7228+1G>A and c.9248G>A) and three recurrent mutations (c.4957dupA, c.6416G>A and c.6557G>A), were found as RP causative in the four families. The missense variant c.5093T>C was determined to be a variant of unknown significance (VUS) due to the variant's colocalization in the same allele with the reported pathogenic mutation c.6416G>A. The two novel variants were further confirmed absent in 100 unrelated healthy controls. Online predictive software indicated potential pathogenicity of the three missense mutations. Further, crystal structural modeling suggested generation of two abnormal hydrogen bonds by the missense mutation p.G2186E (c.6557G>A) and elongation of its neighboring β-sheet induced by p.G3083D (c.9248G>A), which could alter the tertiary structure of the eys protein and thus interrupt its physicochemical properties. Taken together, with the targeted NGS approach, we reveal novel EYS mutations and prove the efficiency of targeted NGS in the genetic diagnoses of RP. We also first report the correlation between EYS mutations and RPSP. The genotypic-phenotypic relationship in all Chinese patients carrying mutations in the EYS

Evolving artificial metalloenzymes via random mutagenesis

Science.gov (United States)

Yang, Hao; Swartz, Alan M.; Park, Hyun June; Srivastava, Poonam; Ellis-Guardiola, Ken; Upp, David M.; Lee, Gihoon; Belsare, Ketaki; Gu, Yifan; Zhang, Chen; Moellering, Raymond E.; Lewis, Jared C.

2018-03-01

Random mutagenesis has the potential to optimize the efficiency and selectivity of protein catalysts without requiring detailed knowledge of protein structure; however, introducing synthetic metal cofactors complicates the expression and screening of enzyme libraries, and activity arising from free cofactor must be eliminated. Here we report an efficient platform to create and screen libraries of artificial metalloenzymes (ArMs) via random mutagenesis, which we use to evolve highly selective dirhodium cyclopropanases. Error-prone PCR and combinatorial codon mutagenesis enabled multiplexed analysis of random mutations, including at sites distal to the putative ArM active site that are difficult to identify using targeted mutagenesis approaches. Variants that exhibited significantly improved selectivity for each of the cyclopropane product enantiomers were identified, and higher activity than previously reported ArM cyclopropanases obtained via targeted mutagenesis was also observed. This improved selectivity carried over to other dirhodium-catalysed transformations, including N-H, S-H and Si-H insertion, demonstrating that ArMs evolved for one reaction can serve as starting points to evolve catalysts for others.

Petrographic and Geochemical Analyses of Kirana Hills Shield Rocks around Sargodha and Economic Potential

Directory of Open Access Journals (Sweden)

Muhammad Waseem Khan

2017-04-01

Full Text Available The present study deals with geochemical and petrographic analysis of the Kirana Hill shield rocks of Punjab plains from Buland, Hachi, Shaheen Abad, Shaikh and Machh hills. On basis of the current studies certain modifications have been made in the classification and nomenclature of rocks exposed in the study areas. Chemical analyses have also been carried out in order to calculate Cross Iddings, Pirsson, and Washington (CIPW norms”, to strengthen nomenclature scheme and finally rocks are classified by using “MAGMA SOFTWARE”. Rhyolites predominate over the basalts/dolerites, andesites, and phyllite/ slate. Rhyolitic rocks are light grey, greenish grey and light brown in color, aphanitic in nature. The observed microscopic textures are aphyric, phyric or porphyritic and micropoikilitc. Moreover, some rhyolitic rocks also show flow texture. They are either cryptocrystalline to microcrystalline or microcrystalline to cryptocrystalline. No glassy material has been observed in any thin section. Mafic rocks are characterized by the presence of ferromagnesian minerals with plagioclase. Andesites exhibit mainly porphyritic texture, but aphyric texture has also been observed in few samples. Hydrothermal alterations are also very common in these rocks. Other rock assemblages identified during laboratory studies from Kirana area include: tuffs i.e. (Lithic Crystal Tuff and Lithic Tuff, basaltic andesite, rhyodacite/ dacite, slate/ phyllite, ankeritic rocks/ veins and quartzofeldspathic veins. Our studies also reveal that no evidence of quartzite has been found in the samples collected from above mentioned areas of Kirana, although it has been reported in previous literature. Iron (Fe has been observed in rhyolite as well as other volcanic rocks of Kirana hills, its presence suggests magma from deep mantle instead of crustal melting / anatexis. In the present analysis some primary and secondary copper minerals including chalcopyrite, atacamite and

Stratigraphy and structure of the northern and western flanks of the Black Hills Uplift, Wyoming, Montana, and South Dakota

International Nuclear Information System (INIS)

Robinson, C.S.; Mapel, W.J.; Bergendahl, M.H.

1981-01-01

This report describes the stratigraphy and structure of an area of about 5000 square miles in northeastern Wyoming and adjacent parts of Montana and South Dakota. The area includes the northern end and part of the western side of the Black Hills Uplift and the adjoining part of the Powder River Basin. About 11,000 ft of sedimentary rocks ranging in age from Mississippian to Early Tertiary are exposed in the area, not including surficial deposits of Tertiary (.) and Quaternary age. Oil is produced from several fields on the wet side of the Black Hills Uplift in Wyoming. Bentonite is mined at many places. The Fort Union and Wasatch Formations contain large reserves of sub-bituminous coal, and Lakota Formation contains some bituminous coal

Highly preferential association of NonF508del CF mutations with the M470 allele.

Science.gov (United States)

Ciminelli, B M; Bonizzato, A; Bombieri, C; Pompei, F; Gabaldo, M; Ciccacci, C; Begnini, A; Holubova, A; Zorzi, P; Piskackova, T; Macek, M; Castellani, C; Modiano, G; Pignatti, P F

2007-01-01

On the basis of previous findings on random individuals, we hypothesized a preferential association of CF causing mutations with the M allele of the M470V polymorphic site of the CFTR gene. We have determined the M/V-CF mutation haplotype in a series of 201 North East Italian and 73 Czech CF patients who were not F508del homozygotes, as F508del was already known to be fully associated with the M allele. Out of 358 not F508del CF genes, 84 carried the V allele and 274 the less common M allele. In the N-E Italian population, MM subjects have a risk of carrying a CF causing mutation 6.9x greater than VV subjects when F508del is excluded and 15.4x when F508del is included. In the Czech population a similar, although less pronounced, association is observed. Besides the possible biological significance of this association, the possibility of exploiting it for a pilot screening program has been explored in a local North East Italian population for which CF patients were characterized for their CF mutation. General M470V genotyping followed by common CF mutation screening limited to couples in which each partner carries at least one M allele would need testing only 39% of the couples, which contribute 89% of the total risk, with a cost benefit.

Water Content in the SW USA Mantle Lithosphere: FTIR Analysis of Dish Hill and Kilbourne Hole Pyroxenites

Science.gov (United States)

Gibler, Robert; Peslier, Anne H.; Schaffer, Lillian Aurora; Brandon, Alan D.

2014-01-01

Kilbourne Hole (NM, USA) and Dish Hill (CA, USA) mantle xenoliths sample continental mantle in two different tectonic settings. Kilbourne Hole (KH) is located in the Rio Grande rift. Dish Hill (DH) is located in the southern Mojave province, an area potentially affected by subduction of the Farallon plate beneath North America. FTIR analyses were obtained on well characterized pyroxenite, dunite and wehrlite xenoliths, thought to represent crystallized melts at mantle depths. PUM normalized REE patterns of the KH bulk-rocks are slightly LREE enriched and consistent with those of liquids generated by 6% melting of a spinel peridotite source. Pyroxenite pyroxenes have no detectable water but one DH wehrlite, which bulk-rock is LREE enriched, has 4 ppm H2O in orthopyroxene and 2 Ga. The Farallon subduction appears to have enriched in water the southwestern United States lithospheric mantle further east than DH, beneath the Colorado plateau.

Influence of a roughness length error on vertical wind speed extrapolation for 2D ideal hills using an OpenFOAM® RANS simulation

Directory of Open Access Journals (Sweden)

Einav-Levy Hanan

2014-01-01

Full Text Available In modelling wind flow over a flat and complex terrain, the choice of roughness-length-distribution is critical for accurate wind speed predications. This choice is often made based on the Davenport scale [1]. A satellite or aerial image of the location is used [2–4] and subjective or objective measures are used for translating the image into roughness length - z0 - based on the Davenport scale. The choice of a Davenport table value is generally regarded as within an error of plus or minus one table value, leading to a ±6% error in wind speed predictions for a flat terrain in neutral conditions [5]. In the paper this error is studied for a non-flat terrain, using a series of CFD simulations for 2D hills of various combinations of aspect ratio and steepness. Results show that the wind speed prediction error as a result of a “wrong” parameterization decreases with hill steepness until separation occurs. As a result of separation the error increases slightly, and then decreases again with a further increase in hill steepness.

Multivariate analysis of subsurface radiometric data in Rongsohkham area, East Khasi Hills district, Meghalaya (India): implication on uranium exploration.

Science.gov (United States)

Kukreti, B M; Pandey, Pradeep; Singh, R V

2012-08-01

Non-coring based exploratory drilling was under taken in the sedimentary environment of Rangsohkham block, East Khasi Hills district to examine the eastern extension of existing uranium resources located at Domiasiat and Wakhyn in the Mahadek basin of Meghalaya (India). Although radiometric survey and radiometric analysis of surface grab/channel samples in the block indicate high uranium content but the gamma ray logging results of exploratory boreholes in the block, did not obtain the expected results. To understand this abrupt discontinuity between the two sets of data (surface and subsurface) multivariate statistical analysis of primordial radioactive elements (K(40), U(238) and Th(232)) was performed using the concept of representative subsurface samples, drawn from the randomly selected 11 boreholes of this block. The study was performed to a high confidence level (99%), and results are discussed for assessing the U and Th behavior in the block. Results not only confirm the continuation of three distinct geological formations in the area but also the uranium bearing potential in the Mahadek sandstone of the eastern part of Mahadek Basin. Copyright © 2012 Elsevier Ltd. All rights reserved.

Exploring the common molecular basis for the universal DNA mutation bias: Revival of Loewdin mutation model

International Nuclear Information System (INIS)

Fu, Liang-Yu; Wang, Guang-Zhong; Ma, Bin-Guang; Zhang, Hong-Yu

2011-01-01

Highlights: → There exists a universal G:C → A:T mutation bias in three domains of life. → This universal mutation bias has not been sufficiently explained. → A DNA mutation model proposed by Loewdin 40 years ago offers a common explanation. -- Abstract: Recently, numerous genome analyses revealed the existence of a universal G:C → A:T mutation bias in bacteria, fungi, plants and animals. To explore the molecular basis for this mutation bias, we examined the three well-known DNA mutation models, i.e., oxidative damage model, UV-radiation damage model and CpG hypermutation model. It was revealed that these models cannot provide a sufficient explanation to the universal mutation bias. Therefore, we resorted to a DNA mutation model proposed by Loewdin 40 years ago, which was based on inter-base double proton transfers (DPT). Since DPT is a fundamental and spontaneous chemical process and occurs much more frequently within GC pairs than AT pairs, Loewdin model offers a common explanation for the observed universal mutation bias and thus has broad biological implications.

Hornborg, A. & Hill, J. D. (eds. 2011. Ethnicity in Ancient Amazonia: Reconstructing Past Identities from Archaeology, Linguistics and Ethnohistory

Directory of Open Access Journals (Sweden)

Phil Riris

2013-02-01

Full Text Available Book review: Hornborg, A. & Hill, J. D. (eds. 2011. 'Ethnicity in Ancient Amazonia:' 'Reconstructing Past Identities from Archaeology, Linguistics and Ethnohistory.' Boulder: University Press of Colorado, £60

Yield and net income of unripe corn in function of the hilling dates / Produção e renda líquida de milho verde em função da época de amontoa

Directory of Open Access Journals (Sweden)

Diovany Doffinger Ramos

2009-07-01

Full Text Available The Agromen 2029 unripe corn was studied without and with hilling on 14; 28; 42; 14-28; 14-42; 28-42 and 14-28-42 days after sowing (DAS. Those eight treatments were arranged in a randomized experimental block design, with four replications. The highest heights of plant (176.9 cm and of first ear (83.9 cm were from those with no hilling (SA and the smallest ones (162.4 and 72.9 cm, respectively were from those with hilling on 28 DAS. The greatest yield of ears (56,000 ears ha-1 was obtained from 14-28-42 DAS treatments and the smallest one was from SA (47,000 ears ha-1. The greatest yield of non commercial ears (15,000 ears ha-1 was obtained from 14-42 and 14-28-42 DAS treatments and the smallest one was from SA (7,000 ears ha-1. Yield of commercial ears varied from 38,000 ears ha-1, on 28 DAS treatment to 41,000 ears ha-1, on 14, 42, 28-42 and 14-28-42 DAS treatments. Costs of yield varied from R$ 1,315.90 ha-1, in SA treatment, to R$ 1,774.17 ha-1, with hilling on 14-28-42 DAS. The greatest net income was R$ 2,684.10 ha-1 with no hilling and the smallest was R$ 2,166.81 ha-1 with hilling on 14-42 DAS. In the conditions that the experiment was carried out it was concluded that the cultivation with no hilling is recommended because it showed the smallest yield cost and the greatest net income.Foi estudado o milho-verde Agromen 2029, sem amontoa e com amontoa aos 14; 28; 42; 14-28; 14-42; 28-42 e 14-28-42 dias após a semeadura-DAS. Os oito tratamentos foram arranjados no delineamento experimental blocos casualizados, com quatro repetições. As maiores alturas da planta (176,9 cm e da primeira espiga (83,9 cm foram encontradas no tratamento sem amontoa e as menores (162,4 e 72,9 cm, respectivamente no tratamento com amontoa aos 28 DAS. A maior produção total de espigas (56.000 espigas ha-1 foi obtida no tratamento 14-28-42 DAS e a menor foi no sem amontoa (47.000 espigas ha-1. A maior produção de espigas não comerciais (15.000 espigas ha-1

Evaluating the Impacts of Grassland Conversions to Experimental Forest on Groundwater Recharge in the Nebraska Sand Hills

Science.gov (United States)

Adane, Zablon A.

The Nebraska Sand Hills grasslands provide the greatest groundwater recharge rates in the High Plains Aquifer. However, the grasslands and their ecological services have become vulnerable to land use change and degradation. This study used a series of field data to investigate the effects of grassland conversions to forest on recharge rates in a century-old experimental forest in the Sand Hills. The results show that the impact of grassland conversion on recharge was dependent on the species and plantation density. Estimated recharge rates beneath the dense plantations represent reductions of 86-94% relative to the native grassland. Results of 1H Nuclear Magnetic Resonance spectral analysis suggested that the surface soil organic carbon beneath pine plantations also contain up to 3 times the ratio of hydrophobic components than the native grasslands and may alter the soil hydraulic properties. This investigation further uncovered a previously overlooked feedback between the effect of soil organic carbon chemical shift generated by the ponderosa pine needle litter decomposition; namely that the alteration may have a link to reduced groundwater recharge rates. Thus, a global optimizer algorithm was used to estimate the effective soil hydraulic parameters from monthly soil moisture contents and recharge rates were then estimated through HYDRUS 1-D numerical modeling for grassland and pine forest soils. The impact of grassland conversion to pine was an overall reduction of groundwater recharge by nearly 100%. These outcomes highlight the significance of the grasslands for recharge, in the Sand Hills and the sustainability of the High Plains Aquifer.

Mutations induced by ultraviolet light

International Nuclear Information System (INIS)

Pfeifer, Gerd P.; You, Young-Hyun; Besaratinia, Ahmad

2005-01-01

The different ultraviolet (UV) wavelength components, UVA (320-400 nm), UVB (280-320 nm), and UVC (200-280 nm), have distinct mutagenic properties. A hallmark of UVC and UVB mutagenesis is the high frequency of transition mutations at dipyrimidine sequences containing cytosine. In human skin cancers, about 35% of all mutations in the p53 gene are transitions at dipyrimidines within the sequence 5'-TCG and 5'-CCG, and these are localized at several mutational hotspots. Since 5'-CG sequences are methylated along the p53 coding sequence in human cells, these mutations may be derived from sunlight-induced pyrimidine dimers forming at sequences that contain 5-methylcytosine. Cyclobutane pyrimidine dimers (CPDs) form preferentially at dipyrimidines containing 5-methylcytosine when cells are irradiated with UVB or sunlight. In order to define the contribution of 5-methylcytosine to sunlight-induced mutations, the lacI and cII transgenes in mouse fibroblasts were used as mutational targets. After 254 nm UVC irradiation, only 6-9% of the base substitutions were at dipyrimidines containing 5-methylcytosine. However, 24-32% of the solar light-induced mutations were at dipyrimidines that contain 5-methylcytosine and most of these mutations were transitions. Thus, CPDs forming preferentially at dipyrimidines with 5-methylcytosine are responsible for a considerable fraction of the mutations induced by sunlight in mammalian cells. Using mouse cell lines harboring photoproduct-specific photolyases and mutational reporter genes, we showed that CPDs (rather than 6-4 photoproducts or other lesions) are responsible for the great majority of UVB-induced mutations. An important component of UVB mutagenesis is the deamination of cytosine and 5-methylcytosine within CPDs. The mutational specificity of long-wave UVA (340-400 nm) is distinct from that of the shorter wavelength UV and is characterized mainly by G to T transversions presumably arising through mechanisms involving oxidized DNA

Structure Based Thermostability Prediction Models for Protein Single Point Mutations with Machine Learning Tools.

Directory of Open Access Journals (Sweden)

Lei Jia

Full Text Available Thermostability issue of protein point mutations is a common occurrence in protein engineering. An application which predicts the thermostability of mutants can be helpful for guiding decision making process in protein design via mutagenesis. An in silico point mutation scanning method is frequently used to find "hot spots" in proteins for focused mutagenesis. ProTherm (http://gibk26.bio.kyutech.ac.jp/jouhou/Protherm/protherm.html is a public database that consists of thousands of protein mutants' experimentally measured thermostability. Two data sets based on two differently measured thermostability properties of protein single point mutations, namely the unfolding free energy change (ddG and melting temperature change (dTm were obtained from this database. Folding free energy change calculation from Rosetta, structural information of the point mutations as well as amino acid physical properties were obtained for building thermostability prediction models with informatics modeling tools. Five supervised machine learning methods (support vector machine, random forests, artificial neural network, naïve Bayes classifier, K nearest neighbor and partial least squares regression are used for building the prediction models. Binary and ternary classifications as well as regression models were built and evaluated. Data set redundancy and balancing, the reverse mutations technique, feature selection, and comparison to other published methods were discussed. Rosetta calculated folding free energy change ranked as the most influential features in all prediction models. Other descriptors also made significant contributions to increasing the accuracy of the prediction models.

Integration of Ground-based Magnetics and Vertical Deformation Measurements for the Characterization of the San Andreas Fault at the Durmid Hill Region, California

Science.gov (United States)

Alvarez, K.; Polet, J.

2017-12-01

The Durmid Hill region is located near the termination of the San Andreas Fault (SAF) at Bombay Beach. This section of the fault has not experienced any major earthquakes for at least the last three centuries. During a 6 year study, Sylvester et al. (1993) collected vertical deformation measurements at Durmid Hill from monuments they installed along a 2.37 km leveling line normal to the SAF. They concluded that interseismic processes account for most of the growth at Durmid Hill and estimated more than 9 mm of uplift within the leveling line, with uniform tilt at distances greater than 500 m from the fault. Langenheim et al. (2014) created a model based on ground-based magnetic data that they collected in the same area and found a complex magnetic structure with a broad band magnetic anomaly present on the northeast side of SAF and a prominent magnetic high along the main mapped trace of the SAF. A primary objective of our study is to reoccupy the leveling line from Sylvester et al. (1993), across the SAF at Durmid Hill. Additionally, we will utilize subsurface geophysical techniques to enhance our understanding of the fault geometry along the southernmost end of the SAF and its relationship to the aseismic deformation at Durmid Hill. Elevation profiles are measured using Nikon Nivo 5C total stations and magnetic field intensity measurements are made by a GSM-19TGW v7.0 walking magnetometer, with a VLF (Very Low requency) attachment. We will present preliminary results from data sets gathered in March and May of 2017, as well as additional surveys that will be carried out in October and November. The preliminary maps produced from the results of the first magnetic surveys show two significant and distinct magnetic anomalies consistent with earlier studies. Initial monument elevation comparisons could only be made for monuments located at the north-eastern end of the leveling line, at a distance of about 1.5 km behind Bat Cave Buttes. There appear to be sections of

Automation of diagnostic genetic testing: mutation detection by cyclic minisequencing.

Science.gov (United States)

Alagrund, Katariina; Orpana, Arto K

2014-01-01

The rising role of nucleic acid testing in clinical decision making is creating a need for efficient and automated diagnostic nucleic acid test platforms. Clinical use of nucleic acid testing sets demands for shorter turnaround times (TATs), lower production costs and robust, reliable methods that can easily adopt new test panels and is able to run rare tests in random access principle. Here we present a novel home-brew laboratory automation platform for diagnostic mutation testing. This platform is based on the cyclic minisequecing (cMS) and two color near-infrared (NIR) detection. Pipetting is automated using Tecan Freedom EVO pipetting robots and all assays are performed in 384-well micro plate format. The automation platform includes a data processing system, controlling all procedures, and automated patient result reporting to the hospital information system. We have found automated cMS a reliable, inexpensive and robust method for nucleic acid testing for a wide variety of diagnostic tests. The platform is currently in clinical use for over 80 mutations or polymorphisms. Additionally to tests performed from blood samples, the system performs also epigenetic test for the methylation of the MGMT gene promoter, and companion diagnostic tests for analysis of KRAS and BRAF gene mutations from formalin fixed and paraffin embedded tumor samples. Automation of genetic test reporting is found reliable and efficient decreasing the work load of academic personnel.

A new Lower Triassic ichthyopterygian assemblage from Fossil Hill, Nevada

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Neil P. Kelley

2016-01-01

Full Text Available We report a new ichthyopterygian assemblage from Lower Triassic horizons of the Prida Formation at Fossil Hill in central Nevada. Although fragmentary, the specimens collected so far document a diverse fauna. One partial jaw exhibits isodont dentition with blunt tipped, mesiodistally compressed crowns and striated enamel. These features are shared with the Early Triassic genus Utatsusaurus known from coeval deposits in Japan and British Columbia. An additional specimen exhibits a different dentition characterized by relatively small, rounded posterior teeth resembling other Early Triassic ichthyopterygians, particularly Grippia. This Nevada assemblage marks a southward latitudinal extension for Early Triassic ichthyopterygians along the eastern margin of Panthalassa and indicates repeated trans-hemispheric dispersal events in Early Triassic ichthyopterygians.

Mutation direction by irradiation in rice

International Nuclear Information System (INIS)

Wang Cailian; Chen Qiufang; Jin Wei; Lu Yimei

2001-01-01

The mutation directions of rice were studied. The results indicated that the mutation directions of rice induced by 14 C were invert correlation to their genetic backgrounds of tested rice varieties, i.e. early mature and short stem varieties produced later mature and higher stem mutation; late mature and high stem varieties produced earlier mature and shorter stem mutation; the varieties of middle maturity and height produced both direction mutations of earlier and later maturity or shorter and higher stem. The mutation directions induced by 14 C were also related to treated doses and stages. Frequency of earlier maturity mutation by protons treatment were higher than those induced by other mutagens. Frequency of later maturity by γ-rays were higher than those induced by other mutagens. Frequency of short stem mutation by synchronous irradiation (soft X-rays) were higher than those induced by other mutagens. Frequency of beneficial mutation induced by proton treatment were higher than those induced by γ-rays

Stability of orbits around a spinning body in a pseudo-Newtonian Hill problem

International Nuclear Information System (INIS)

Steklain, A.F.; Letelier, P.S.

2009-01-01

A pseudo-Newtonian Hill problem based on a potential proposed by Artemova et al. [I.A. Artemova, G. Bjoernsson, I.D. Novikov, Astrophys. J. 461 (1996) 565] is presented. This potential reproduces some of the general relativistic effects due to the spin angular momentum of the bodies, like the dragging of inertial frames. Poincare maps, Lyapunov exponents and fractal escape techniques are employed to study the stability of bounded and unbounded orbits for different spins of the central body

ENVIRONMENTAL TECHNOLOGY VERIFICATION REPORT. STORMWATER SOURCE AREA TREATMENT DEVICE. THE TERRE HILL CONCRETE PRODUCTS TERRE KLEEN™ 09

Science.gov (United States)

Verification testing of the Terre Hill Concrete Products Terre Kleen™ 09 was conducted on a 1.27 acre portion of the City of Harrisburg, Pennsylvania Department of Public Works facility. The Terre Kleen™ devices combines primary and secondary chambers, baffles, a screen, and incl...

Exploring farmer perceptions of agricultural innovations for maize-legume intensification in the mid-hills region of Nepal

NARCIS (Netherlands)

Alomía Hinojosa, M.V.; Speelman, Erika N.; Thapa, Arun; Wei, Hisiang-En; Mcdonald, Andrew J.; Tittonell, Pablo; Groot, Jeroen C.J.

2018-01-01

Maize-legume intercropping is a fundamental component of mixed farming systems in the mid-hills of Nepal. However, its productivity is constrained by several biophysical and social factors, and limited adoption of proven agricultural innovations. In this study, we assessed the productivity impact of

Abundance of Black-backed woodpeckers and other birds in relation to disturbance and forest structure in the Black Hills and Bear Lodge Mountains of South Dakota and Wyoming

Science.gov (United States)

Elizabeth A. Matseur

2017-01-01

Natural disturbances, such as wildfire and mountain pine beetle (Dentroctonus ponderosae, hereafter MPB) infestations, are two sources of large-scale disturbance that can significantly alter forest structure in the Black Hills. The Black Hills has recently experienced one of the largest MPB outbreaks in the last 100 years, along with varying levels of wildfires...

PIK3CA mutations frequently coexist with RAS and BRAF mutations in patients with advanced cancers.

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Filip Janku

Full Text Available Oncogenic mutations of PIK3CA, RAS (KRAS, NRAS, and BRAF have been identified in various malignancies, and activate the PI3K/AKT/mTOR and RAS/RAF/MEK pathways, respectively. Both pathways are critical drivers of tumorigenesis.Tumor tissues from 504 patients with diverse cancers referred to the Clinical Center for Targeted Therapy at MD Anderson Cancer Center starting in October 2008 were analyzed for PIK3CA, RAS (KRAS, NRAS, and BRAF mutations using polymerase chain reaction-based DNA sequencing.PIK3CA mutations were found in 54 (11% of 504 patients tested; KRAS in 69 (19% of 367; NRAS in 19 (8% of 225; and BRAF in 31 (9% of 361 patients. PIK3CA mutations were most frequent in squamous cervical (5/14, 36%, uterine (7/28, 25%, breast (6/29, 21%, and colorectal cancers (18/105, 17%; KRAS in pancreatic (5/9, 56%, colorectal (49/97, 51%, and uterine cancers (3/20, 15%; NRAS in melanoma (12/40, 30%, and uterine cancer (2/11, 18%; BRAF in melanoma (23/52, 44%, and colorectal cancer (5/88, 6%. Regardless of histology, KRAS mutations were found in 38% of patients with PIK3CA mutations compared to 16% of patients with wild-type (wtPIK3CA (p = 0.001. In total, RAS (KRAS, NRAS or BRAF mutations were found in 47% of patients with PIK3CA mutations vs. 24% of patients wtPIK3CA (p = 0.001. PIK3CA mutations were found in 28% of patients with KRAS mutations compared to 10% with wtKRAS (p = 0.001 and in 20% of patients with RAS (KRAS, NRAS or BRAF mutations compared to 8% with wtRAS (KRAS, NRAS or wtBRAF (p = 0.001.PIK3CA, RAS (KRAS, NRAS, and BRAF mutations are frequent in diverse tumors. In a wide variety of tumors, PIK3CA mutations coexist with RAS (KRAS, NRAS and BRAF mutations.

Impact of Fluoroquinolone Resistance Mutations on Gonococcal Fitness and In Vivo Selection for Compensatory Mutations

Science.gov (United States)

Kunz, Anjali N.; Begum, Afrin A.; Wu, Hong; D'Ambrozio, Jonathan A.; Robinson, James M.; Shafer, William M.; Bash, Margaret C.; Jerse, Ann E.

2012-01-01

Background. Quinolone-resistant Neisseria gonorrhoeae (QRNG) arise from mutations in gyrA (intermediate resistance) or gyrA and parC (resistance). Here we tested the consequence of commonly isolated gyrA91/95 and parC86 mutations on gonococcal fitness. Methods. Mutant gyrA91/95 and parC86 alleles were introduced into wild-type gonococci or an isogenic mutant that is resistant to macrolides due to an mtrR−79 mutation. Wild-type and mutant bacteria were compared for growth in vitro and in competitive murine infection. Results. In vitro growth was reduced with increasing numbers of mutations. Interestingly, the gyrA91/95 mutation conferred an in vivo fitness benefit to wild-type and mtrR−79 mutant gonococci. The gyrA91/95, parC86 mutant, in contrast, showed a slight fitness defect in vivo, and the gyrA91/95, parC86, mtrR−79 mutant was markedly less fit relative to the parent strains. A ciprofloxacin-resistant (CipR) mutant was selected during infection with the gyrA91/95, parC86, mtrR−79 mutant in which the mtrR−79 mutation was repaired and the gyrA91 mutation was altered. This in vivo–selected mutant grew as well as the wild-type strain in vitro. Conclusions. gyrA91/95 mutations may contribute to the spread of QRNG. Further acquisition of a parC86 mutation abrogates this fitness advantage; however, compensatory mutations can occur that restore in vivo fitness and maintain CipR. PMID:22492860

A Hill Gastropexy Combined with Nissen Fundoplication Appears Equivalent to a Collis-Nissen in the Management of Short Esophagus.

Science.gov (United States)

Bellevue, Oliver C; Louie, Brian E; Jutric, Zeljka; Farivar, Alexander S; Aye, Ralph W

2018-03-01

A Collis gastroplasty combined with a Nissen fundoplication is commonly used when a shortened esophagus is encountered. An alternative combines intra-abdominal fixation of the gastroesophageal junction via a Hill gastropexy with a Nissen fundoplication to maintain length and avoid juxtaposing acid-secreting tissue against the diseased esophagus. A retrospective case-controlled analysis of 106 consecutive patients with short esophagus undergoing Hill-Nissen (HN) or Collis-Nissen (CN) was compared to a cohort of 105 matched patients without short esophagus undergoing primary Nissen fundoplication (NF). At a median follow-up of 27 months, all groups (HN:CN:NF) improved significantly over preoperative baseline with no differences in overall complications (18 vs 16 vs 19%, p = 0.78), DeMeester score (11.1 vs 19.1 vs 14.2, p = 0.49), postoperative PPI use (16 vs 22 vs 15%, p = 0.24), anatomic recurrences (11.7 vs 5.5 vs 7%, p = 0.43), or quality of life (6.8 vs 6.7 vs 6.4, p = 0.3). The management of shortened esophagus with Hill-Nissen is safe and as effective as Collis gastroplasty with Nissen fundoplication. Both options appear to produce similar outcomes to patients requiring only a Nissen fundoplication suggesting a shortened esophagus does not beget an inferior outcome.

Oncogene mutational profile in nasopharyngeal carcinoma

Directory of Open Access Journals (Sweden)

Zhang ZC

2014-03-01

Full Text Available Zi-Chen Zhang,1,* Sha Fu,1,* Fang Wang,1 Hai-Yun Wang,1 Yi-Xin Zeng,2 Jian-Yong Shao11Department of Molecular Diagnostics, 2Department of Experimental Research, Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Guangzhou, People's Republic of China *These authors contributed equally to this work Abstract: Nasopharyngeal carcinoma (NPC is a common tumor in Southern China, but the oncogene mutational status of NPC patients has not been clarified. Using time-of-flight mass spectrometry, 238 mutation hotspots in 19 oncogenes were examined in 123 NPC patients. The relationships between mutational status and clinical data were assessed with a χ2 or Fisher's exact test. Survival analysis was performed using the Kaplan–Meier method with the log-rank test. In 123 patients, 21 (17.1% NPC tumors were positive for mutations in eight oncogenes: six patients had PIK3CA mutations (4.9%, five NRAS mutations (4.1%, four KIT mutations (3.3%, two PDGFRA mutations (1.6%, two ABL mutations (1.6%, and one with simultaneous mutations in HRAS, EGFR, and BRAF (1%. Patients with mutations were more likely to relapse or develop metastasis than those with wild-type alleles (P=0.019. No differences or correlations were found in other clinical characteristics or in patient survival. No mutations were detected in oncogenes AKT1, AKT2, CDK, ERBB2, FGFR1, FGFR3, FLT3, JAK2, KRAS, MET, and RET. These results demonstrate an association between NPC and mutations in NRAS, KIT, PIK3CA, PDGFRA, and ABL, which are associated with patient relapse and metastasis. Keywords: NPC, oncogene, mutation

Primeiro registro de Oligonychus yothersi (McGregor (Acari: Tetranychidae em Eucalyptus grandis Hill ex Maiden no Brasil First record of Oligonychus yothersi (McGregor (Acari: Tetranychidae on Eucalyptus grandis Hill ex Maiden in Brazil

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Fabrício Fagundes Pereira

2005-08-01

Full Text Available Relata-se a infestação de um ácaro-vermelho em mudas clonais de Eucalyptus grandis Hill ex Maiden, mantidas em casa de vegetação no município de Martinho Campos, Minas Gerais. O ácaro foi observado na parte superior das folhas que exibiam sinais de sucção de seiva e bronzeamento. Essas injúrias causaram desenvolvimento anormal e morte de plantas. O ácaro foi identificado como Oligonychus yothersi (McGregor (Acari: Tetranychidae, e isso representa o primeiro registro dessa espécie em mudas clonais de E. grandis no Brasil.An infestation of the red spider mite was reported in clone seedlings of Eucalyptus grandis Hill ex Maiden under greenhouse conditions, in the municipality of Martinho Campos, Minas Gerais State. The spider mite was found on the leaf upper faces with signs of sap suction and bronzing. Such injuries caused abnormal development and plant death. The spider mite was identified as Oligonychus yothersi (McGregor (Acari: Tetranychidae. This is the first record of O. yothersi on E. grandis seedlings in Brazil.

Geologic Map of the Bodie Hills Volcanic Field, California and Nevada: Anatomy of Miocene Cascade Arc Magmatism in the Western Great Basin

Science.gov (United States)

John, D. A.; du Bray, E. A.; Blakely, R. J.; Box, S.; Fleck, R. J.; Vikre, P. G.; Rytuba, J. J.; Moring, B. C.

2011-12-01

The Bodie Hills Volcanic Field (BHVF) is a >700 km2, long-lived (~9 Ma) but episodic, Miocene eruptive center in the southern part of the ancestral Cascade magmatic arc. A 1:50,000-scale geologic map based on extensive new mapping, combined with 40Ar/39Ar dates, geochemical data, and detailed gravity and aeromagnetic surveys, defines late Miocene magmatic and hydrothermal evolution of the BHVF and contrasts the subduction-related BHVF with the overlying, post-subduction, bimodal Plio-Pleistocene Aurora Volcanic Field (AVF). Important features of the BHVF include: Eruptions occurred during 3 major eruptive stages: dominantly trachyandesite stratovolcanoes (~14.7 to 12.9 Ma), mixed silicic trachyandesite, dacite, and rhyolite (~11.3 to 9.6 Ma), and dominantly silicic trachyandesite to dacite domes (~9.2 to 8.0 Ma). Small rhyolite domes were emplaced at ~6 Ma. Trachyandesitic stratovolcanoes with extensive debris flow aprons form the outer part of BHVF, whereas silicic trachyandesite to rhyolite domes are more centrally located. Geophysical data suggest that many BHVF volcanoes have shallow plutonic roots that extend to depths ≥1-2 km below the surface, and much of the Bodie Hills may be underlain by low density plutons presumably related to BHVF volcanism. BHVF rocks contain ~50 to 78% SiO2 (though few rocks have Bodie Hills at ~10 Ma, but the composition and eruptive style of volcanism continued unchanged for 2 Ma. However, kinematic data for veins and faults in mining districts suggest a change in the stress field from transtensional to extensional approximately coincident with cessation of subduction. The Bodie Hills are flanked to the east, north, and west by sedimentary basins that began to form in the late Miocene (locally >11 Ma). Fine to coarse sedimentary deposits within the BHVF include stream deposits in channels that cut across the hills and were partly filled by ~9.4 Ma Eureka Valley Tuff erupted 20 km to the northwest. Shallow dips and preservation of

Environmental Assessment (EA): Proposed Construction of a Munitions Flight Maintenance Facility, Hill Air Force Base, Utah

Science.gov (United States)

2008-07-01

031 /·-c.,.. ?i Ogden C.ty Ma1 tenance Area (Redes~gnated 2001) er ~~.., Sa Laice Oty Ma1 enance Alea (RedeSIQreled 1999) Pr<MYOrem...Vegetation Hill AFB is located in a geographic region that would typically support a mountain -brush type native plant community. Dominant vegetation

Evolutionary dynamics of adult stem cells: Comparison of random and immortal strand segregation mechanisms

OpenAIRE

Tannenbaum, Emmanuel; Sherley, James L.; Shakhnovich, Eugene I.

2004-01-01

This paper develops a point-mutation model describing the evolutionary dynamics of a population of adult stem cells. Such a model may prove useful for quantitative studies of tissue aging and the emergence of cancer. We consider two modes of chromosome segregation: (1) Random segregation, where the daughter chromosomes of a given parent chromosome segregate randomly into the stem cell and its differentiating sister cell. (2) ``Immortal DNA strand'' co-segregation, for which the stem cell reta...

Mutation Breeding Newsletter. No. 39

International Nuclear Information System (INIS)

1992-01-01

This newsletter contains brief articles on the use of radiation to induce mutations in plants; radiation-induced mutants in Chrysanthemum; disrupting the association between oil and protein content in soybean seeds; mutation studies on bougainvillea; a new pepper cultivar; and the use of mutation induction to improve the quality of yam beans. A short review of the seminar on the use of mutation and related biotechnology for crop improvement in the Middle East and Mediterranean regions, and a description of a Co-ordinated Research Programme on the application of DNA-based marker mutations for the improvement of cereals and other sexually reproduced crop species are also included. Two tables are given: these are based on the ''FAO/IAEA Mutant Varieties Database'' and show the number of mutated varieties and the number of officially released mutant varieties in particular crops/species. Refs and tabs

Screening for duplications, deletions and a common intronic mutation detects 35% of second mutations in patients with USH2A monoallelic mutations on Sanger sequencing.

Science.gov (United States)

Steele-Stallard, Heather B; Le Quesne Stabej, Polona; Lenassi, Eva; Luxon, Linda M; Claustres, Mireille; Roux, Anne-Francoise; Webster, Andrew R; Bitner-Glindzicz, Maria

2013-08-08

Usher Syndrome is the leading cause of inherited deaf-blindness. It is divided into three subtypes, of which the most common is Usher type 2, and the USH2A gene accounts for 75-80% of cases. Despite recent sequencing strategies, in our cohort a significant proportion of individuals with Usher type 2 have just one heterozygous disease-causing mutation in USH2A, or no convincing disease-causing mutations across nine Usher genes. The purpose of this study was to improve the molecular diagnosis in these families by screening USH2A for duplications, heterozygous deletions and a common pathogenic deep intronic variant USH2A: c.7595-2144A>G. Forty-nine Usher type 2 or atypical Usher families who had missing mutations (mono-allelic USH2A or no mutations following Sanger sequencing of nine Usher genes) were screened for duplications/deletions using the USH2A SALSA MLPA reagent kit (MRC-Holland). Identification of USH2A: c.7595-2144A>G was achieved by Sanger sequencing. Mutations were confirmed by a combination of reverse transcription PCR using RNA extracted from nasal epithelial cells or fibroblasts, and by array comparative genomic hybridisation with sequencing across the genomic breakpoints. Eight mutations were identified in 23 Usher type 2 families (35%) with one previously identified heterozygous disease-causing mutation in USH2A. These consisted of five heterozygous deletions, one duplication, and two heterozygous instances of the pathogenic variant USH2A: c.7595-2144A>G. No variants were found in the 15 Usher type 2 families with no previously identified disease-causing mutations. In 11 atypical families, none of whom had any previously identified convincing disease-causing mutations, the mutation USH2A: c.7595-2144A>G was identified in a heterozygous state in one family. All five deletions and the heterozygous duplication we report here are novel. This is the first time that a duplication in USH2A has been reported as a cause of Usher syndrome. We found that 8 of

Optimization Review: Bunker Hill Mining and Metallurgical Complex Superfund Site, Central Treatment Plant (CTP), Kellogg, Shoshone County, Idaho

Science.gov (United States)

The Bunker Hill Mining and Metallurgical Complex Superfund Site includes all areas of the Coeur d’Alene Basin where mining-related contamination occurred and encompasses a 21-square mile “Box” along Interstate 90 surrounding the former smelter complex.

Practical lesson of Photosynthesis: A demonstration of Hill reaction in chloroplasts with energy dissipation by fluorescence upon photosystems uncoupling or inhibition by Diuron herbicide

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Vadim Ravara Viviani

2016-05-01

Full Text Available During photosynthesis, the photochemical electron transfer process is easily demonstrated by the Hill reaction, where artificial electron acceptors are reduced by active chloroplasts suspensions in the presence of light.  However, the destiny of luminous energy absorbed by chlorophyll molecules in uncoupled or damaged photosystems is not usually demonstrated. Here we provide an adaptation of the classical Hill reaction using intact spinach chloroplasts, which includes the visualization of energy dissipation by fluorescence in lysed chloroplasts, and a dose/effect response in photosystems inhibited by the herbicide DCMU. This laboratory lesson, which is aimed to biochemistry and biophysics for undergraduate courses of Chemistry, Biological, Environmental and Agricultural Sciences, provides the basic photochemical principles using the classical Hill reaction, and photophysical principles through the visualization of energy dissipation by chlorophyll fluorescence,  improving the understanding of the photosynthetic process, and introducing the concept of fluorescence and its applications as bioanalytical tool to monitor photosynthesis in plants and vegetal ecosystems.

Radiation in relation to mutation rate, mutational damage and human ill-health

International Nuclear Information System (INIS)

Roberts, P.B.

1976-09-01

The effect of radiation in increasing the frequency of gene mutations is now reasonably understood. We discuss first how an increase in the mutation rate is reflected in the mutational damage expressed in populations. It is shown that the mutational damage, assessed by the loss of fitness in a population or the number of eventual gene extinctions, is equal to the number of new mutations arising per generation or the mutation rate. In a population of stable size, a dose of 1 rem given to 10 6 people leads to roughly 600 gene extinctions when summed over all ensuing generations if the dose is applied to only one generation; this number of extinctions will occur in each succeeding generation if the dose is given to every generation. However, the concept of genetic extinction, although quantifiable, is of limited value in assessing radiation risks since its impact on human ill-health is very speculative. In particular, no estimate can be made of the total cost of effects which are minor in each individual in which they arise, but which, because they are so minor, persist in the population for many generations. The best current estimate is for 14-140 obvious defects in the first few generations following exposure of 10 6 people to a dose of 1 rem. (auth.)

77 FR 36394 - Safety Zone for Fireworks Display, Potomac River, National Harbor Access Channel; Oxon Hill, MD

Science.gov (United States)

2012-06-19

... to coordinate protest activities so that your message can be received without jeopardizing the safety or security of people, places or vessels. 7. Unfunded Mandates Reform Act The Unfunded Mandates..., adjacent to the Gaylord National Resort Hotel, at Oxon Hill in Prince Georges County, Maryland scheduled on...

Radiation-induced mutation at minisatellite loci

International Nuclear Information System (INIS)

Dubrova, Y.E.; Nesterov, V.N.; Krouchinsky, N.G.

1997-01-01

We are studying the radiation-induced increase of mutation rate in minisatellite loci in mice and humans. Minisatellite mutations were scored by multilocus DNA fingerprint analysis in the progeny of γ-irradiated and non-irradiated mice. The frequency of mutation in offspring of irradiated males was 1.7 higher that in the control group. Germline mutation at human minisatellite loci was studied among children born in heavily polluted areas of the Mogilev district of Belarus after the Chernobyl accident and in a control population. The frequency of mutation assayed both by DNA fingerprinting and by eight single locus probes was found to be two times higher in the exposed families than in the control group. Furthermore, mutation rate was correlated with the parental radiation dose for chronic exposure 137 Cs, consistent with radiation-induction of germline mutation. The potential use of minisatellites in monitoring germline mutation in humans will be discussed

AIP mutations and gigantism.

Science.gov (United States)

Rostomyan, Liliya; Potorac, Iulia; Beckers, Pablo; Daly, Adrian F; Beckers, Albert

2017-06-01

AIP mutations are rare in sporadic acromegaly but they are seen at a higher frequency among certain specific populations of pituitary adenoma patients (pituitary gigantism cases, familial isolated pituitary adenoma (FIPA) kindreds, and patients with macroadenomas who are diagnosed ≤30 years). AIP mutations are most prevalent in patients with pituitary gigantism (29% of this group were found to have mutations in AIP gene). These data support targeted genetic screening for AIP mutations/deletions in these groups of pituitary adenoma patients. Earlier diagnosis of AIP-related acromegaly-gigantism cases enables timely clinical evaluation and treatment, thereby improving outcomes in terms of excessive linear growth and acromegaly comorbidities. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Evolution of the Puente Hills Thrust Fault

Science.gov (United States)

Bergen, K. J.; Shaw, J. H.; Dolan, J. F.

2013-12-01

This study aims to assess the evolution of the blind Puente Hills thrust fault system (PHT) by determining its age of initiation, lateral propagation history, and changes in slip rate over time. The PHT presents one of the largest seismic hazards in the United States, given its location beneath downtown Los Angeles. The PHT is comprised of three fault segments: the Los Angeles (LA), Santa Fe Springs (SFS), and Coyote Hills (CH). The LA and SFS segments are characterized by growth stratigraphy where folds formed by uplift on the fault segments have been continually buried by sediment from the Los Angeles and San Gabriel rivers. The CH segment has developed topography and is characterized by onlapping growth stratigraphy. This depositional setting gives us the unique opportunity to measure uplift on the LA and SFS fault segments, and minimum uplift on the CH fault segment, as the difference in sediment thicknesses across the buried folds. We utilize depth converted oil industry seismic reflection data to image the fold geometries. Identifying time-correlative stratigraphic markers for slip rate determination in the basin has been a problem for researchers in the past, however, as the faunal assemblages observed in wells are time-transgressive by nature. To overcome this, we utilize the sequence stratigraphic model and well picks of Ponti et al. (2007) as a basis for mapping time-correlative sequence boundaries throughout our industry seismic reflection data from the present to the Pleistocene. From the Pleistocene to Miocene we identify additional sequence boundaries in our seismic reflection data from imaged sequence geometries and by correlating industry well formation tops. The sequence and formation top picks are then used to build 3-dimensional surfaces in the modeling program Gocad. From these surfaces we measure the change in thicknesses across the folds to obtain uplift rates between each sequence boundary. Our results show three distinct phases of

Fort Hills Oil Sands Project No Net Loss Lake earthfill structure

Energy Technology Data Exchange (ETDEWEB)

Blakely, D.; Sawatsky, L. [Golder Associates Ltd., Calgary, AB (Canada); Wog, K.; Paz, S. [Alberta Environment, Edmonton, AB (Canada). Water Management Operations; Chernys, S. [Petro-Canada, Calgary, AB (Canada)

2007-07-01

The Fort Hills Oil Sands Project (FHOSP) is located north of Fort McMurray, Alberta. The Fort Hills Energy Corporation (FHEC) must compensate for fish habitat lost as a result of mine development that would disturb natural streams and lakes. FHEC planned to construct a fisheries compensation lake on the north end of its leased property, contained in part by an earthfill structure. Unlike most dam structures, the FHOSP No Net Loss Lake (NNLL) earthfill structure was planned solely for the creation of fisheries compensation habitat. Therefore, the NNLL earthfill structure must be designed with robust features that can handle any foreseeable environmental condition without failure, so that it may be accepted as a sustainable feature of the mine closure landscape. This paper discussed the design features of the NNLL earthfill structure. The paper presented information on the background of the project including regulatory criteria for the fisheries compensation habitat; fisheries compensation habitat location; and design criteria for the NNLL. The features of the NNLL earthfill structure were also discussed. In addition, the paper outlined the dam safety classification for earthfill structure and anticipated system performance. The proposed monitoring program and permanent closure plans were also discussed. It was concluded that the earthfill structure was designed with several features that would allow it to become a part of the closure landscape. These included a high width to height ratio, significant erosion protection, and an aggressive reclamation plan. These features will provide a sound basis for FHEC to apply for a reclamation certificate at the end of mine life. 3 refs., 3 tabs., 8 figs.

Efficient utilization of rain water in hill agriculture

International Nuclear Information System (INIS)

Singh, S.R.; Singh, S.S.; Khan, A.R.

2002-05-01

Hill areas generally receive rainfall of around or more than 1150 mm. More than 2500 mm rainfall is received in about 30.2 million ha hilly area of the country. Besides many other factors high rainfall and heavy runoff are mainly responsible for low productivity. Because of sloppy characters and shallow soil depth, major fraction of rainwater is lost as runoff. Invariably evaporation exceeds the moisture stored and thereby depletes soils of their moisture reserve when crops are to be sown. Too much water at one time and too little in another during the same year causes wide instability in the production and productivity (Gupta et al., 2000). In high rainfall/hilly areas small and scattered land holdings exclusively rain dependent subsistence type of agriculture, low irrigated area of eastern Himalaya (northeastern region of India) further aggravate the problem. Harvesting of runoff at micro level for storage and recycling, control of erosion and moisture conservation are necessary and possible measures for better crop production. (author)

Mutational specificity of γ-rays

International Nuclear Information System (INIS)

Hoebee, Barbara.

1990-01-01

The aim of the study described in this thesis was to get more information on the mutagenic properties of radiation-induced DNA modifications and the possible mechanisms involved in radiation-induced mutagenesis, principally by investigating the kinds of mutations by DNA sequence analysis. The mutations were analyzed after γ-irradiation of recombinant bacteriophage M13 and plasmide pUC DNA in diluted aqueous solutions, followed by transfection or transformation to E. coli cells, in which the damaged DNA molecules are repaired and replicated. Error-prone repair, misrepair or bypass of lesions during replication may lead to the introduction of mutations. Both the M13 and the plasmid DNA used in our mutation studies contain a mutation target sequence, which makes an easy selection and sequence analysis of mutant DNA molecules possible. Under the radiation conditions used, e.g. irradiation of diluted aqueous DNA solutions, only DNA damage occurs introduced by the water derived OH* and H* radicals and the hydrated electrons. By using different gas conditions during irradiation the relative yields of these reaction species can be manipulated, which opens up the opportunity to determine their effects separately. The mutation spectrum obtained in double-stranded (ds) M13DNA after irradiation under oxic conditions and the mutation spectrum obtained under the same conditions and in the same mutation target but cloned in plasmid DNA, are described. The mutation specificity under anoxic conditions in ds M13DNA is given. Results obtained after irradiation of ds M13DNA under N 2 conditions are discussed together with experiments with single-stranded DNA. Similarities and differences between radiation-induced mutation spectra obtained by other groups and those presented in this thesis are discussed. (author). 155 refs.; 134 figs.; 16 tabs

Calreticulin Mutations in Bulgarian MPN Patients.

Science.gov (United States)

Pavlov, Ivan; Hadjiev, Evgueniy; Alaikov, Tzvetan; Spassova, Sylva; Stoimenov, Angel; Naumova, Elissaveta; Shivarov, Velizar; Ivanova, Milena

2018-01-01

Somatic mutations in JAK2, MPL and CALR are recurrently identified in most of the cases with Philadelphia chromosome negative myeloproliferative neoplasms (MPNs). We applied four molecular genetic methods for identification of CALR exon 9 mutations, including high resolution melt (HRM) analysis, Sanger sequencing, semiconductor target genes sequencing and whole exome sequencing. A total of 78 patients with myeloid malignancies were included in the study. We identified 14 CALR exon 9 mutated cases out of 78 studied patients with myeloid malignancies. All mutated patients were diagnosed with MPN being either PMF (n = 7) or ET (n = 7). Nine cases had type 1 mutations and 5 cases had type 2 mutations. CALR exon 9, MPL exon 10 and JAK2 p. V617F were mutually exclusive. There were no statistically significant differences in the hematological parameters between the cases with CALR and JAK2 or MPL mutations. Notably, all four techniques were fully concordant in the detection of CALR mutations. This is one of the few reports on the CALR mutations frequency in South-eastern populations. Our study shows that the frequency and patterns of these mutations is identical to those in the patients' cohorts from Western countries. Besides we demonstrated the utility of four different methods for their detection.

Re-Os isotope systematics of the Radio Hill Ni-Cu-PGE complex, West Pilbara Craton, Western Australia

International Nuclear Information System (INIS)

Frick, L.R.; McBride, J.S.

1999-01-01

Full text: The Radio Hill Complex is one of several layered mafic-ultramafic intrusions that were emplaced into the west Pilbara Craton at ca. 2.9 Ga. It is believed to be genetically related to other similar intrusions in the area which include the Munni Munni, Andover, Dingo and Maitland Complexes (Hoatson et al. 1999). The Radio Hill Complex is the only one of these intrusions to contain economic quantities of Ni and Cu at the present time. This relatively small intrusion (∼1200 m stratigraphic thickness) is divided into two zones, an upper gabbroic zone and a lower ultramafic zone, the base of which possesses massive magmatic sulfide mineralisation (pyrrhotite, pentlandite, chalcopyrite, magnetite). Re-Os isotopic data have been obtained for a suite of samples from underground, outcrop (gabbroic zone samples) and drill core. Os concentrations in the mineralised zone are very high, ranging from 19 to 191 ppb Os, with low Re/Os ratios ( 10,000), where R-factor is defined as the mass ratio of silicate magma to sulfide magma that it has equilibrated with. However, modelling of the Radio Hill ore system using Re, Os and PGE (Hoatson et al. 1992) concentrations suggest that the R-factor in the Radio Hill ore was low (100-900). Therefore, the initial Os isotopic composition of the ore should be radiogenic (high gOs >+500) if local crustal contamination triggered sulfide saturation. The slightly radiogenic initial Os isotopic composition suggests that the bulk parental magma was a crustally-contaminated magma. R-factor modelling further suggests that the parental magma to this intrusion was neither a basalt nor a pure komatiite, but more likely a contaminated komatiite (with a relatively high Os concentration). This agrees with the previous findings of Hoatson et al. (1992) who proposed a parental magma of siliceous high-magnesium basalt (SHMB) composition. Our Re-Os isotope modelling agrees with the trace elements, Nd and Sr isotope modelling of Hoatson et al. (1992

Predicting mortality of ponderosa pine regeneration after prescribed fire in the Black Hills, South Dakota, USA

Science.gov (United States)

Mike Battaglia; Frederick W. Smith; Wayne D. Shepperd

2009-01-01

Reduction of crown fire hazard in Pinus ponderosa forests in the Black Hills, SD, often focuses on the removal of overstorey trees to reduce crown bulk density. Dense ponderosa pine regeneration establishes several years after treatment and eventually increases crown fire risk if allowed to grow. Using prescribed fire to control this regeneration is...

The late Middle Devonian fauna of Red Hill I, Nevada, and its paleobiogeographic implications

Directory of Open Access Journals (Sweden)

H.-P. Schultze

2010-08-01

Full Text Available The fauna of the Middle Devonian Red Hill I locality, Nevada, is unusual in the co-occurrence of a rich fish assemblage with a rich invertebrate one. Sponges are second in abundance of specimens and number of species only to the fishes and occur together with other invertebrates (conodonts, conulariids, dacryoconarid tentaculites, gastropods, bivalves, brachiopods, arthropods, and unidentifiable ammonoids and echinoderms. The invertebrates indicate a marine depositional paleoenvironment. The conodonts indicate a placement within the lower disparalis Zone, late Givetian. The fish assemblage is dominated by the antiarch Asterolepis. All the other fishes, acanthodians, actinopterygians and sarcopterygians, are less common. The closest biogeographic relationship of the fish fauna is with the Middle/Late Devonian fish fauna of the Baltic Region, followed by that of eastern Canada (Miguasha, Scotland and Iran. This distribution corresponds to the Devonian Euramerica faunal province with connection to eastern Gondwana (Iran and Australia. Localities with the same genera as Red Hill I are interpreted as marine with the exception of the Scottish localities. Asterolepis is the most widely distributed vertebrate genus, mostly marine, but it may be able to enter freshwater like Eusthenopteron if one accepts a freshwater depositional paleoenvironment for the Scottish localities. doi:10.1002/mmng.201000001

Development of mapped stress-field boundary conditions based on a Hill-type muscle model.

Science.gov (United States)

Cardiff, P; Karač, A; FitzPatrick, D; Flavin, R; Ivanković, A

2014-09-01

Forces generated in the muscles and tendons actuate the movement of the skeleton. Accurate estimation and application of these musculotendon forces in a continuum model is not a trivial matter. Frequently, musculotendon attachments are approximated as point forces; however, accurate estimation of local mechanics requires a more realistic application of musculotendon forces. This paper describes the development of mapped Hill-type muscle models as boundary conditions for a finite volume model of the hip joint, where the calculated muscle fibres map continuously between attachment sites. The applied muscle forces are calculated using active Hill-type models, where input electromyography signals are determined from gait analysis. Realistic muscle attachment sites are determined directly from tomography images. The mapped muscle boundary conditions, implemented in a finite volume structural OpenFOAM (ESI-OpenCFD, Bracknell, UK) solver, are employed to simulate the mid-stance phase of gait using a patient-specific natural hip joint, and a comparison is performed with the standard point load muscle approach. It is concluded that physiological joint loading is not accurately represented by simplistic muscle point loading conditions; however, when contact pressures are of sole interest, simplifying assumptions with regard to muscular forces may be valid. Copyright © 2014 John Wiley & Sons, Ltd.

Orchid: a novel management, annotation and machine learning framework for analyzing cancer mutations.

Science.gov (United States)

Cario, Clinton L; Witte, John S

2018-03-15

As whole-genome tumor sequence and biological annotation datasets grow in size, number and content, there is an increasing basic science and clinical need for efficient and accurate data management and analysis software. With the emergence of increasingly sophisticated data stores, execution environments and machine learning algorithms, there is also a need for the integration of functionality across frameworks. We present orchid, a python based software package for the management, annotation and machine learning of cancer mutations. Building on technologies of parallel workflow execution, in-memory database storage and machine learning analytics, orchid efficiently handles millions of mutations and hundreds of features in an easy-to-use manner. We describe the implementation of orchid and demonstrate its ability to distinguish tissue of origin in 12 tumor types based on 339 features using a random forest classifier. Orchid and our annotated tumor mutation database are freely available at https://github.com/wittelab/orchid. Software is implemented in python 2.7, and makes use of MySQL or MemSQL databases. Groovy 2.4.5 is optionally required for parallel workflow execution. JWitte@ucsf.edu. Supplementary data are available at Bioinformatics online.

Crossing fitness canyons by a finite population

Science.gov (United States)

Saakian, David B.; Bratus, Alexander S.; Hu, Chin-Kun

2017-06-01

We consider the Wright-Fisher model of the finite population evolution on a fitness landscape defined in the sequence space by a path of nearly neutral mutations. We study a specific structure of the fitness landscape: One of the intermediate mutations on the mutation path results in either a large fitness value (climbing up a fitness hill) or a low fitness value (crossing a fitness canyon), the rest of the mutations besides the last one are neutral, and the last sequence has much higher fitness than any intermediate sequence. We derive analytical formulas for the first arrival time of the mutant with two point mutations. For the first arrival problem for the further mutants in the case of canyon crossing, we analytically deduce how the mean first arrival time scales with the population size and fitness difference. The location of the canyon on the path of sequences has a crucial role. If the canyon is at the beginning of the path, then it significantly prolongs the first arrival time; otherwise it just slightly changes it. Furthermore, the fitness hill at the beginning of the path strongly prolongs the arrival time period; however, the hill located near the end of the path shortens it. We optimize the first arrival time by applying a nonzero selection to the intermediate sequences. We extend our results and provide a scaling for the valley crossing time via the depth of the canyon and population size in the case of a fitness canyon at the first position. Our approach is useful for understanding some complex evolution systems, e.g., the evolution of cancer.

Manual on mutation breeding. 2. ed.