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Sample records for rage radiation-hydrodynamic code

  1. The RAGE radiation-hydrodynamic code

    International Nuclear Information System (INIS)

    Gittings, Michael; Clover, Michael; Betlach, Thomas; Byrne, Nelson; Ranta, Dale; Weaver, Robert; Coker, Robert; Dendy, Edward; Hueckstaedt, Robert; New, Kim; Oakes, W Rob; Stefan, Ryan

    2008-01-01

    We describe RAGE, the 'radiation adaptive grid Eulerian' radiation-hydrodynamics code, including its data structures, its parallelization strategy and performance, its hydrodynamic algorithm(s), its (gray) radiation diffusion algorithm, and some of the considerable amount of verification and validation efforts. The hydrodynamics is a basic Godunov solver, to which we have made significant improvements to increase the advection algorithm's robustness and to converge stiffnesses in the equation of state. Similarly, the radiation transport is a basic gray diffusion, but our treatment of the radiation-material coupling, wherein we converge nonlinearities in a novel manner to allow larger timesteps and more robust behavior, can be applied to any multi-group transport algorithm

  2. The RAGE radiation-hydrodynamic code

    Energy Technology Data Exchange (ETDEWEB)

    Gittings, Michael; Clover, Michael; Betlach, Thomas; Byrne, Nelson; Ranta, Dale [Science Applications International Corp. MS A-1, 10260 Campus Point Drive, San Diego, CA 92121 (United States); Weaver, Robert; Coker, Robert; Dendy, Edward; Hueckstaedt, Robert; New, Kim; Oakes, W Rob [Los Alamos National Laboratory, MS T087, PO Box 1663, Los Alamos, NM 87545 (United States); Stefan, Ryan [TaylorMade-adidas Golf, 5545 Fermi Court, Carlsbad, CA 92008-7324 (United States)], E-mail: michael.r.clover@saic.com

    2008-10-01

    We describe RAGE, the 'radiation adaptive grid Eulerian' radiation-hydrodynamics code, including its data structures, its parallelization strategy and performance, its hydrodynamic algorithm(s), its (gray) radiation diffusion algorithm, and some of the considerable amount of verification and validation efforts. The hydrodynamics is a basic Godunov solver, to which we have made significant improvements to increase the advection algorithm's robustness and to converge stiffnesses in the equation of state. Similarly, the radiation transport is a basic gray diffusion, but our treatment of the radiation-material coupling, wherein we converge nonlinearities in a novel manner to allow larger timesteps and more robust behavior, can be applied to any multi-group transport algorithm.

  3. The Monte Carlo photoionization and moving-mesh radiation hydrodynamics code CMACIONIZE

    Science.gov (United States)

    Vandenbroucke, B.; Wood, K.

    2018-04-01

    We present the public Monte Carlo photoionization and moving-mesh radiation hydrodynamics code CMACIONIZE, which can be used to simulate the self-consistent evolution of HII regions surrounding young O and B stars, or other sources of ionizing radiation. The code combines a Monte Carlo photoionization algorithm that uses a complex mix of hydrogen, helium and several coolants in order to self-consistently solve for the ionization and temperature balance at any given type, with a standard first order hydrodynamics scheme. The code can be run as a post-processing tool to get the line emission from an existing simulation snapshot, but can also be used to run full radiation hydrodynamical simulations. Both the radiation transfer and the hydrodynamics are implemented in a general way that is independent of the grid structure that is used to discretize the system, allowing it to be run both as a standard fixed grid code, but also as a moving-mesh code.

  4. xRage Equation of State

    Energy Technology Data Exchange (ETDEWEB)

    Grove, John W. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-08-16

    The xRage code supports a variety of hydrodynamic equation of state (EOS) models. In practice these are generally accessed in the executing code via a pressure-temperature based table look up. This document will describe the various models supported by these codes and provide details on the algorithms used to evaluate the equation of state.

  5. Experiments at Scale with In-Situ Visualization Using ParaView/Catalyst in RAGE

    Energy Technology Data Exchange (ETDEWEB)

    Kares, Robert John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2014-10-31

    In this paper I describe some numerical experiments performed using the ParaView/Catalyst in-situ visualization infrastructure deployed in the Los Alamos RAGE radiation-hydrodynamics code to produce images from a running large scale 3D ICF simulation on the Cielo supercomputer at Los Alamos. The detailed procedures for the creation of the visualizations using ParaView/Catalyst are discussed and several images sequences from the ICF simulation problem produced with the in-situ method are presented. My impressions and conclusions concerning the use of the in-situ visualization method in RAGE are discussed.

  6. Modeling of laser-driven hydrodynamics experiments

    Science.gov (United States)

    di Stefano, Carlos; Doss, Forrest; Rasmus, Alex; Flippo, Kirk; Desjardins, Tiffany; Merritt, Elizabeth; Kline, John; Hager, Jon; Bradley, Paul

    2017-10-01

    Correct interpretation of hydrodynamics experiments driven by a laser-produced shock depends strongly on an understanding of the time-dependent effect of the irradiation conditions on the flow. In this talk, we discuss the modeling of such experiments using the RAGE radiation-hydrodynamics code. The focus is an instability experiment consisting of a period of relatively-steady shock conditions in which the Richtmyer-Meshkov process dominates, followed by a period of decaying flow conditions, in which the dominant growth process changes to Rayleigh-Taylor instability. The use of a laser model is essential for capturing the transition. also University of Michigan.

  7. MULTI2D - a computer code for two-dimensional radiation hydrodynamics

    Science.gov (United States)

    Ramis, R.; Meyer-ter-Vehn, J.; Ramírez, J.

    2009-06-01

    Simulation of radiation hydrodynamics in two spatial dimensions is developed, having in mind, in particular, target design for indirectly driven inertial confinement energy (IFE) and the interpretation of related experiments. Intense radiation pulses by laser or particle beams heat high-Z target configurations of different geometries and lead to a regime which is optically thick in some regions and optically thin in others. A diffusion description is inadequate in this situation. A new numerical code has been developed which describes hydrodynamics in two spatial dimensions (cylindrical R-Z geometry) and radiation transport along rays in three dimensions with the 4 π solid angle discretized in direction. Matter moves on a non-structured mesh composed of trilateral and quadrilateral elements. Radiation flux of a given direction enters on two (one) sides of a triangle and leaves on the opposite side(s) in proportion to the viewing angles depending on the geometry. This scheme allows to propagate sharply edged beams without ray tracing, though at the price of some lateral diffusion. The algorithm treats correctly both the optically thin and optically thick regimes. A symmetric semi-implicit (SSI) method is used to guarantee numerical stability. Program summaryProgram title: MULTI2D Catalogue identifier: AECV_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AECV_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 151 098 No. of bytes in distributed program, including test data, etc.: 889 622 Distribution format: tar.gz Programming language: C Computer: PC (32 bits architecture) Operating system: Linux/Unix RAM: 2 Mbytes Word size: 32 bits Classification: 19.7 External routines: X-window standard library (libX11.so) and corresponding heading files (X11/*.h) are

  8. Improvements to SOIL: An Eulerian hydrodynamics code

    International Nuclear Information System (INIS)

    Davis, C.G.

    1988-04-01

    Possible improvements to SOIL, an Eulerian hydrodynamics code that can do coupled radiation diffusion and strength of materials, are presented in this report. Our research is based on the inspection of other Eulerian codes and theoretical reports on hydrodynamics. Several conclusions from the present study suggest that some improvements are in order, such as second-order advection, adaptive meshes, and speedup of the code by vectorization and/or multitasking. 29 refs., 2 figs

  9. Iterative linear solvers in a 2D radiation-hydrodynamics code: Methods and performance

    International Nuclear Information System (INIS)

    Baldwin, C.; Brown, P.N.; Falgout, R.; Graziani, F.; Jones, J.

    1999-01-01

    Computer codes containing both hydrodynamics and radiation play a central role in simulating both astrophysical and inertial confinement fusion (ICF) phenomena. A crucial aspect of these codes is that they require an implicit solution of the radiation diffusion equations. The authors present in this paper the results of a comparison of five different linear solvers on a range of complex radiation and radiation-hydrodynamics problems. The linear solvers used are diagonally scaled conjugate gradient, GMRES with incomplete LU preconditioning, conjugate gradient with incomplete Cholesky preconditioning, multigrid, and multigrid-preconditioned conjugate gradient. These problems involve shock propagation, opacities varying over 5--6 orders of magnitude, tabular equations of state, and dynamic ALE (Arbitrary Lagrangian Eulerian) meshes. They perform a problem size scalability study by comparing linear solver performance over a wide range of problem sizes from 1,000 to 100,000 zones. The fundamental question they address in this paper is: Is it more efficient to invert the matrix in many inexpensive steps (like diagonally scaled conjugate gradient) or in fewer expensive steps (like multigrid)? In addition, what is the answer to this question as a function of problem size and is the answer problem dependent? They find that the diagonally scaled conjugate gradient method performs poorly with the growth of problem size, increasing in both iteration count and overall CPU time with the size of the problem and also increasing for larger time steps. For all problems considered, the multigrid algorithms scale almost perfectly (i.e., the iteration count is approximately independent of problem size and problem time step). For pure radiation flow problems (i.e., no hydrodynamics), they see speedups in CPU time of factors of ∼15--30 for the largest problems, when comparing the multigrid solvers relative to diagonal scaled conjugate gradient

  10. Fully implicit 1D radiation hydrodynamics: Validation and verification

    International Nuclear Information System (INIS)

    Ghosh, Karabi; Menon, S.V.G.

    2010-01-01

    A fully implicit finite difference scheme has been developed to solve the hydrodynamic equations coupled with radiation transport. Solution of the time-dependent radiation transport equation is obtained using the discrete ordinates method and the energy flow into the Lagrangian meshes as a result of radiation interaction is fully accounted for. A tridiagonal matrix system is solved at each time step to determine the hydrodynamic variables implicitly. The results obtained from this fully implicit radiation hydrodynamics code in the planar geometry agrees well with the scaling law for radiation driven strong shock propagation in aluminium. For the point explosion problem the self similar solutions are compared with results for pure hydrodynamic case in spherical geometry. Results obtained when radiation interaction is also accounted agree with those of point explosion with heat conduction for lower input energies. Having, thus, benchmarked the code, self convergence of the method w.r.t. time step is studied in detail for both the planar and spherical problems. Spatial as well as temporal convergence rates are ≅1 as expected from the difference forms of mass, momentum and energy conservation equations. This shows that the asymptotic convergence rate of the code is realized properly.

  11. Fast algorithm for two-dimensional data table use in hydrodynamic and radiative-transfer codes

    International Nuclear Information System (INIS)

    Slattery, W.L.; Spangenberg, W.H.

    1982-01-01

    A fast algorithm for finding interpolated atomic data in irregular two-dimensional tables with differing materials is described. The algorithm is tested in a hydrodynamic/radiative transfer code and shown to be of comparable speed to interpolation in regularly spaced tables, which require no table search. The concepts presented are expected to have application in any situation with irregular vector lengths. Also, the procedures that were rejected either because they were too slow or because they involved too much assembly coding are described

  12. CMacIonize: Monte Carlo photoionisation and moving-mesh radiation hydrodynamics

    Science.gov (United States)

    Vandenbroucke, Bert; Wood, Kenneth

    2018-02-01

    CMacIonize simulates the self-consistent evolution of HII regions surrounding young O and B stars, or other sources of ionizing radiation. The code combines a Monte Carlo photoionization algorithm that uses a complex mix of hydrogen, helium and several coolants in order to self-consistently solve for the ionization and temperature balance at any given time, with a standard first order hydrodynamics scheme. The code can be run as a post-processing tool to get the line emission from an existing simulation snapshot, but can also be used to run full radiation hydrodynamical simulations. Both the radiation transfer and the hydrodynamics are implemented in a general way that is independent of the grid structure that is used to discretize the system, allowing it to be run both as a standard fixed grid code and also as a moving-mesh code.

  13. Smoothed Particle Hydrodynamics Coupled with Radiation Transfer

    Science.gov (United States)

    Susa, Hajime

    2006-04-01

    We have constructed a brand-new radiation hydrodynamics solver based upon Smoothed Particle Hydrodynamics, which works on a parallel computer system. The code is designed to investigate the formation and evolution of first-generation objects at z ≳ 10, where the radiative feedback from various sources plays important roles. The code can compute the fraction of chemical species e, H+, H, H-, H2, and H+2 by by fully implicit time integration. It also can deal with multiple sources of ionizing radiation, as well as radiation at Lyman-Werner band. We compare the results for a few test calculations with the results of one-dimensional simulations, in which we find good agreements with each other. We also evaluate the speedup by parallelization, which is found to be almost ideal, as long as the number of sources is comparable to the number of processors.

  14. Structure of the solar photosphere studied from the radiation hydrodynamics code ANTARES

    Science.gov (United States)

    Leitner, P.; Lemmerer, B.; Hanslmeier, A.; Zaqarashvili, T.; Veronig, A.; Grimm-Strele, H.; Muthsam, H. J.

    2017-09-01

    The ANTARES radiation hydrodynamics code is capable of simulating the solar granulation in detail unequaled by direct observation. We introduce a state-of-the-art numerical tool to the solar physics community and demonstrate its applicability to model the solar granulation. The code is based on the weighted essentially non-oscillatory finite volume method and by its implementation of local mesh refinement is also capable of simulating turbulent fluids. While the ANTARES code already provides promising insights into small-scale dynamical processes occurring in the quiet-Sun photosphere, it will soon be capable of modeling the latter in the scope of radiation magnetohydrodynamics. In this first preliminary study we focus on the vertical photospheric stratification by examining a 3-D model photosphere with an evolution time much larger than the dynamical timescales of the solar granulation and of particular large horizontal extent corresponding to 25''×25'' on the solar surface to smooth out horizontal spatial inhomogeneities separately for up- and downflows. The highly resolved Cartesian grid thereby covers ˜4 Mm of the upper convection zone and the adjacent photosphere. Correlation analysis, both local and two-point, provides a suitable means to probe the photospheric structure and thereby to identify several layers of characteristic dynamics: The thermal convection zone is found to reach some ten kilometers above the solar surface, while convectively overshooting gas penetrates even higher into the low photosphere. An ≈145 km wide transition layer separates the convective from the oscillatory layers in the higher photosphere.

  15. Improvements in the CHART D radiation-hydrodynamic code III: revised analytic equations of state

    International Nuclear Information System (INIS)

    Thompson, S.L.; Lauson, H.S.

    1974-03-01

    A revised set of in-line equation-of-state subroutines for the CHART D hydrodynamic code is described. The information generated is thermodynamically complete and self-consistent. The temperature and density range of validity is large. Solids, liquids, vapors, plasmas, and all types of phase mixtures are treated. Energy transport properties are calculated. The set of subroutines form a package which can easily be included in other hydrodynamic codes. (20 figures) (U.S.)

  16. In-Situ Visualization Experiments with ParaView Cinema in RAGE

    Energy Technology Data Exchange (ETDEWEB)

    Kares, Robert John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2015-10-15

    A previous paper described some numerical experiments performed using the ParaView/Catalyst in-situ visualization infrastructure deployed in the Los Alamos RAGE radiation-hydrodynamics code to produce images from a running large scale 3D ICF simulation. One challenge of the in-situ approach apparent in these experiments was the difficulty of choosing parameters likes isosurface values for the visualizations to be produced from the running simulation without the benefit of prior knowledge of the simulation results and the resultant cost of recomputing in-situ generated images when parameters are chosen suboptimally. A proposed method of addressing this difficulty is to simply render multiple images at runtime with a range of possible parameter values to produce a large database of images and to provide the user with a tool for managing the resulting database of imagery. Recently, ParaView/Catalyst has been extended to include such a capability via the so-called Cinema framework. Here I describe some initial experiments with the first delivery of Cinema and make some recommendations for future extensions of Cinema’s capabilities.

  17. Final Report. Hydrodynamics by high-energy-density plasma flow and hydrodynamics and radiative hydrodynamics with astrophysical application

    International Nuclear Information System (INIS)

    R Paul Drake

    2004-01-01

    OAK-B135 This is the final report from the project Hydrodynamics by High-Energy-Density Plasma Flow and Hydrodynamics and Radiation Hydrodynamics with Astrophysical Applications. This project supported a group at the University of Michigan in the invention, design, performance, and analysis of experiments using high-energy-density research facilities. The experiments explored compressible nonlinear hydrodynamics, in particular at decelerating interfaces, and the radiation hydrodynamics of strong shock waves. It has application to supernovae, astrophysical jets, shock-cloud interactions, and radiative shock waves

  18. Shadowfax: Moving mesh hydrodynamical integration code

    Science.gov (United States)

    Vandenbroucke, Bert

    2016-05-01

    Shadowfax simulates galaxy evolution. Written in object-oriented modular C++, it evolves a mixture of gas, subject to the laws of hydrodynamics and gravity, and any collisionless fluid only subject to gravity, such as cold dark matter or stars. For the hydrodynamical integration, it makes use of a (co-) moving Lagrangian mesh. The code has a 2D and 3D version, contains utility programs to generate initial conditions and visualize simulation snapshots, and its input/output is compatible with a number of other simulation codes, e.g. Gadget2 (ascl:0003.001) and GIZMO (ascl:1410.003).

  19. Final Report for 'Verification and Validation of Radiation Hydrodynamics for Astrophysical Applications'

    International Nuclear Information System (INIS)

    Zingale, M.; Howell, L.H.

    2010-01-01

    The motivation for this work is to gain experience in the methodology of verification and validation (V and V) of astrophysical radiation hydrodynamics codes. In the first period of this work, we focused on building the infrastructure to test a single astrophysical application code, Castro, developed in collaboration between Lawrence Livermore National Laboratory (LLNL) and Lawrence Berkeley Laboratory (LBL). We delivered several hydrodynamic test problems, in the form of coded initial conditions and documentation for verification, routines to perform data analysis, and a generalized regression test suite to allow for continued automated testing. Astrophysical simulation codes aim to model phenomena that elude direct experimentation. Our only direct information about these systems comes from what we observe, and may be transient. Simulation can help further our understanding by allowing virtual experimentation of these systems. However, to have confidence in our simulations requires us to have confidence in the tools we use. Verification and Validation is a process by which we work to build confidence that a simulation code is accurately representing reality. V and V is a multistep process, and is never really complete. Once a single test problem is working as desired (i.e. that problem is verified), one wants to ensure that subsequent code changes do not break that test. At the same time, one must also search for new verification problems that test the code in a new way. It can be rather tedious to manually retest each of the problems, so before going too far with V and V, it is desirable to have an automated test suite. Our project aims to provide these basic tools for astrophysical radiation hydrodynamics codes.

  20. Coupling hydrodynamics with comoving frame radiative transfer. I. A unified approach for OB and WR stars

    Science.gov (United States)

    Sander, A. A. C.; Hamann, W.-R.; Todt, H.; Hainich, R.; Shenar, T.

    2017-07-01

    Context. For more than two decades, stellar atmosphere codes have been used to derive the stellar and wind parameters of massive stars. Although they have become a powerful tool and sufficiently reproduce the observed spectral appearance, they can hardly be used for more than measuring parameters. One major obstacle is their inconsistency between the calculated radiation field and the wind stratification due to the usage of prescribed mass-loss rates and wind-velocity fields. Aims: We present the concepts for a new generation of hydrodynamically consistent non-local thermodynamical equilibrium (non-LTE) stellar atmosphere models that allow for detailed studies of radiation-driven stellar winds. As a first demonstration, this new kind of model is applied to a massive O star. Methods: Based on earlier works, the PoWR code has been extended with the option to consistently solve the hydrodynamic equation together with the statistical equations and the radiative transfer in order to obtain a hydrodynamically consistent atmosphere stratification. In these models, the whole velocity field is iteratively updated together with an adjustment of the mass-loss rate. Results: The concepts for obtaining hydrodynamically consistent models using a comoving-frame radiative transfer are outlined. To provide a useful benchmark, we present a demonstration model, which was motivated to describe the well-studied O4 supergiant ζPup. The obtained stellar and wind parameters are within the current range of literature values. Conclusions: For the first time, the PoWR code has been used to obtain a hydrodynamically consistent model for a massive O star. This has been achieved by a profound revision of earlier concepts used for Wolf-Rayet stars. The velocity field is shaped by various elements contributing to the radiative acceleration, especially in the outer wind. The results further indicate that for more dense winds deviations from a standard β-law occur.

  1. Non-standard model for electron heat transport for multidimensional hydrodynamic codes

    Energy Technology Data Exchange (ETDEWEB)

    Nicolai, Ph.; Busquet, M.; Schurtz, G. [CEA/DAM-Ile de France, 91 - Bruyeres Le Chatel (France)

    2000-07-01

    In simulations of laser-produced plasma, modeling of heat transport requires an artificial limitation of standard Spitzer-Haerm fluxes. To improve heat conduction processing, we have developed a multidimensional model which accounts for non-local features of heat transport and effects of self-generated magnetic fields. This consistent treatment of both mechanisms has been implemented in a two-dimensional radiation-hydrodynamic code. First results indicate good agreements between simulations and experimental data. (authors)

  2. Non-standard model for electron heat transport for multidimensional hydrodynamic codes

    International Nuclear Information System (INIS)

    Nicolai, Ph.; Busquet, M.; Schurtz, G.

    2000-01-01

    In simulations of laser-produced plasma, modeling of heat transport requires an artificial limitation of standard Spitzer-Haerm fluxes. To improve heat conduction processing, we have developed a multidimensional model which accounts for non-local features of heat transport and effects of self-generated magnetic fields. This consistent treatment of both mechanisms has been implemented in a two-dimensional radiation-hydrodynamic code. First results indicate good agreements between simulations and experimental data. (authors)

  3. RAGE Architecture for Reusable Serious Gaming Technology Components

    Directory of Open Access Journals (Sweden)

    Wim van der Vegt

    2016-01-01

    Full Text Available For seizing the potential of serious games, the RAGE project—funded by the Horizon-2020 Programme of the European Commission—will make available an interoperable set of advanced technology components (software assets that support game studios at serious game development. This paper describes the overall software architecture and design conditions that are needed for the easy integration and reuse of such software assets in existing game platforms. Based on the component-based software engineering paradigm the RAGE architecture takes into account the portability of assets to different operating systems, different programming languages, and different game engines. It avoids dependencies on external software frameworks and minimises code that may hinder integration with game engine code. Furthermore it relies on a limited set of standard software patterns and well-established coding practices. The RAGE architecture has been successfully validated by implementing and testing basic software assets in four major programming languages (C#, C++, Java, and TypeScript/JavaScript, resp.. Demonstrator implementation of asset integration with an existing game engine was created and validated. The presented RAGE architecture paves the way for large scale development and application of cross-engine reusable software assets for enhancing the quality and diversity of serious gaming.

  4. CASTRO: A NEW COMPRESSIBLE ASTROPHYSICAL SOLVER. II. GRAY RADIATION HYDRODYNAMICS

    International Nuclear Information System (INIS)

    Zhang, W.; Almgren, A.; Bell, J.; Howell, L.; Burrows, A.

    2011-01-01

    We describe the development of a flux-limited gray radiation solver for the compressible astrophysics code, CASTRO. CASTRO uses an Eulerian grid with block-structured adaptive mesh refinement based on a nested hierarchy of logically rectangular variable-sized grids with simultaneous refinement in both space and time. The gray radiation solver is based on a mixed-frame formulation of radiation hydrodynamics. In our approach, the system is split into two parts, one part that couples the radiation and fluid in a hyperbolic subsystem, and another parabolic part that evolves radiation diffusion and source-sink terms. The hyperbolic subsystem is solved explicitly with a high-order Godunov scheme, whereas the parabolic part is solved implicitly with a first-order backward Euler method.

  5. New self-similar radiation-hydrodynamics solutions in the high-energy density, equilibrium diffusion limit

    International Nuclear Information System (INIS)

    Lane, Taylor K; McClarren, Ryan G

    2013-01-01

    This work presents semi-analytic solutions to a radiation-hydrodynamics problem of a radiation source driving an initially cold medium. Our solutions are in the equilibrium diffusion limit, include material motion and allow for radiation-dominated situations where the radiation energy is comparable to (or greater than) the material internal energy density. As such, this work is a generalization of the classical Marshak wave problem that assumes no material motion and that the radiation energy is negligible. Including radiation energy density in the model serves to slow down the wave propagation. The solutions provide insight into the impact of radiation energy and material motion, as well as present a novel verification test for radiation transport packages. As a verification test, the solution exercises the radiation–matter coupling terms and their v/c treatment without needing a hydrodynamics solve. An example comparison between the self-similar solution and a numerical code is given. Tables of the self-similar solutions are also provided. (paper)

  6. The ''2T'' ion-electron semi-analytic shock solution for code-comparison with xRAGE: A report for FY16

    International Nuclear Information System (INIS)

    Ferguson, Jim Michael

    2016-01-01

    This report documents an effort to generate the semi-analytic '2T' ion-electron shock solution developed in the paper by Masser, Wohlbier, and Lowrie, and the initial attempts to understand how to use this solution as a code-verification tool for one of LANL's ASC codes, xRAGE. Most of the work so far has gone into generating the semi-analytic solution. Considerable effort will go into understanding how to write the xRAGE input deck that both matches the boundary conditions imposed by the solution, and also what physics models must be implemented within the semi-analytic solution itself to match the model assumptions inherit within xRAGE. Therefore, most of this report focuses on deriving the equations for the semi-analytic 1D-planar time-independent '2T' ion-electron shock solution, and is written in a style that is intended to provide clear guidance for anyone writing their own solver.

  7. Modeling and design of radiative hydrodynamic experiments with X-ray Thomson Scattering measurements on NIF

    Science.gov (United States)

    Ma, K. H.; Lefevre, H. J.; Belancourt, P. X.; MacDonald, M. J.; Doeppner, T.; Keiter, P. A.; Kuranz, C. C.; Johnsen, E.

    2017-10-01

    Recent experiments at the National Ignition Facility studied the effect of radiation on shock-driven hydrodynamic instability growth. X-ray radiography images from these experiments indicate that perturbation growth is lower in highly radiative shocks compared to shocks with negligible radiation flux. The reduction in instability growth is attributed to ablation from higher temperatures in the foam for highly radiative shocks. The proposed design implements the X-ray Thomson Scattering (XRTS) technique in the radiative shock tube platform to measure electron temperatures and densities in the shocked foam. We model these experiments with CRASH, an Eulerian radiation hydrodynamics code with block-adaptive mesh refinement, multi-group radiation transport and electron heat conduction. Simulations are presented with SiO2 and carbon foams for both the high temperature, radiative shock and the low-temperature, hydrodynamic shock cases. Calculations from CRASH give estimations for shock speed, electron temperature, effective ionization, and other quantities necessary for designing the XRTS diagnostic measurement. This work is funded by the LLNL under subcontract B614207, and was performed under the auspices of the U.S. DOE by LLNL under Contract No. DE-AC52-07NA27344.

  8. PHANTOM: Smoothed particle hydrodynamics and magnetohydrodynamics code

    Science.gov (United States)

    Price, Daniel J.; Wurster, James; Nixon, Chris; Tricco, Terrence S.; Toupin, Stéven; Pettitt, Alex; Chan, Conrad; Laibe, Guillaume; Glover, Simon; Dobbs, Clare; Nealon, Rebecca; Liptai, David; Worpel, Hauke; Bonnerot, Clément; Dipierro, Giovanni; Ragusa, Enrico; Federrath, Christoph; Iaconi, Roberto; Reichardt, Thomas; Forgan, Duncan; Hutchison, Mark; Constantino, Thomas; Ayliffe, Ben; Mentiplay, Daniel; Hirsh, Kieran; Lodato, Giuseppe

    2017-09-01

    Phantom is a smoothed particle hydrodynamics and magnetohydrodynamics code focused on stellar, galactic, planetary, and high energy astrophysics. It is modular, and handles sink particles, self-gravity, two fluid and one fluid dust, ISM chemistry and cooling, physical viscosity, non-ideal MHD, and more. Its modular structure makes it easy to add new physics to the code.

  9. Simulation and Analysis of Converging Shock Wave Test Problems

    Energy Technology Data Exchange (ETDEWEB)

    Ramsey, Scott D. [Los Alamos National Laboratory; Shashkov, Mikhail J. [Los Alamos National Laboratory

    2012-06-21

    Results and analysis pertaining to the simulation of the Guderley converging shock wave test problem (and associated code verification hydrodynamics test problems involving converging shock waves) in the LANL ASC radiation-hydrodynamics code xRAGE are presented. One-dimensional (1D) spherical and two-dimensional (2D) axi-symmetric geometric setups are utilized and evaluated in this study, as is an instantiation of the xRAGE adaptive mesh refinement capability. For the 2D simulations, a 'Surrogate Guderley' test problem is developed and used to obviate subtleties inherent to the true Guderley solution's initialization on a square grid, while still maintaining a high degree of fidelity to the original problem, and minimally straining the general credibility of associated analysis and conclusions.

  10. SPECT3D - A multi-dimensional collisional-radiative code for generating diagnostic signatures based on hydrodynamics and PIC simulation output

    Science.gov (United States)

    MacFarlane, J. J.; Golovkin, I. E.; Wang, P.; Woodruff, P. R.; Pereyra, N. A.

    2007-05-01

    SPECT3D is a multi-dimensional collisional-radiative code used to post-process the output from radiation-hydrodynamics (RH) and particle-in-cell (PIC) codes to generate diagnostic signatures (e.g. images, spectra) that can be compared directly with experimental measurements. This ability to post-process simulation code output plays a pivotal role in assessing the reliability of RH and PIC simulation codes and their physics models. SPECT3D has the capability to operate on plasmas in 1D, 2D, and 3D geometries. It computes a variety of diagnostic signatures that can be compared with experimental measurements, including: time-resolved and time-integrated spectra, space-resolved spectra and streaked spectra; filtered and monochromatic images; and X-ray diode signals. Simulated images and spectra can include the effects of backlighters, as well as the effects of instrumental broadening and time-gating. SPECT3D also includes a drilldown capability that shows where frequency-dependent radiation is emitted and absorbed as it propagates through the plasma towards the detector, thereby providing insights on where the radiation seen by a detector originates within the plasma. SPECT3D has the capability to model a variety of complex atomic and radiative processes that affect the radiation seen by imaging and spectral detectors in high energy density physics (HEDP) experiments. LTE (local thermodynamic equilibrium) or non-LTE atomic level populations can be computed for plasmas. Photoabsorption rates can be computed using either escape probability models or, for selected 1D and 2D geometries, multi-angle radiative transfer models. The effects of non-thermal (i.e. non-Maxwellian) electron distributions can also be included. To study the influence of energetic particles on spectra and images recorded in intense short-pulse laser experiments, the effects of both relativistic electrons and energetic proton beams can be simulated. SPECT3D is a user-friendly software package that runs

  11. CASTRO: A NEW COMPRESSIBLE ASTROPHYSICAL SOLVER. III. MULTIGROUP RADIATION HYDRODYNAMICS

    International Nuclear Information System (INIS)

    Zhang, W.; Almgren, A.; Bell, J.; Howell, L.; Burrows, A.; Dolence, J.

    2013-01-01

    We present a formulation for multigroup radiation hydrodynamics that is correct to order O(v/c) using the comoving-frame approach and the flux-limited diffusion approximation. We describe a numerical algorithm for solving the system, implemented in the compressible astrophysics code, CASTRO. CASTRO uses a Eulerian grid with block-structured adaptive mesh refinement based on a nested hierarchy of logically rectangular variable-sized grids with simultaneous refinement in both space and time. In our multigroup radiation solver, the system is split into three parts: one part that couples the radiation and fluid in a hyperbolic subsystem, another part that advects the radiation in frequency space, and a parabolic part that evolves radiation diffusion and source-sink terms. The hyperbolic subsystem and the frequency space advection are solved explicitly with high-order Godunov schemes, whereas the parabolic part is solved implicitly with a first-order backward Euler method. Our multigroup radiation solver works for both neutrino and photon radiation.

  12. Neptune: An astrophysical smooth particle hydrodynamics code for massively parallel computer architectures

    Science.gov (United States)

    Sandalski, Stou

    Smooth particle hydrodynamics is an efficient method for modeling the dynamics of fluids. It is commonly used to simulate astrophysical processes such as binary mergers. We present a newly developed GPU accelerated smooth particle hydrodynamics code for astrophysical simulations. The code is named neptune after the Roman god of water. It is written in OpenMP parallelized C++ and OpenCL and includes octree based hydrodynamic and gravitational acceleration. The design relies on object-oriented methodologies in order to provide a flexible and modular framework that can be easily extended and modified by the user. Several pre-built scenarios for simulating collisions of polytropes and black-hole accretion are provided. The code is released under the MIT Open Source license and publicly available at http://code.google.com/p/neptune-sph/.

  13. VizieR Online Data Catalog: FARGO_THORIN 1.0 hydrodynamic code (Chrenko+, 2017)

    Science.gov (United States)

    Chrenko, O.; Broz, M.; Lambrechts, M.

    2017-07-01

    This archive contains the source files, documentation and example simulation setups of the FARGO_THORIN 1.0 hydrodynamic code. The program was introduced, described and used for simulations in the paper. It is built on top of the FARGO code (Masset, 2000A&AS..141..165M, Baruteau & Masset, 2008ApJ...672.1054B) and it is also interfaced with the REBOUND integrator package (Rein & Liu, 2012A&A...537A.128R). THORIN stands for Two-fluid HydrOdynamics, the Rebound integrator Interface and Non-isothermal gas physics. The program is designed for self-consistent investigations of protoplanetary systems consisting of a gas disk, a disk of small solid particles (pebbles) and embedded protoplanets. Code features: I) Non-isothermal gas disk with implicit numerical solution of the energy equation. The implemented energy source terms are: Compressional heating, viscous heating, stellar irradiation, vertical escape of radiation, radiative diffusion in the midplane and radiative feedback to accretion heating of protoplanets. II) Planets evolved in 3D, with close encounters allowed. The orbits are integrated using the IAS15 integrator (Rein & Spiegel, 2015MNRAS.446.1424R). The code detects the collisions among planets and resolve them as mergers. III) Refined treatment of the planet-disk gravitational interaction. The code uses a vertical averaging of the gravitational potential, as outlined in Muller & Kley (2012A&A...539A..18M). IV) Pebble disk represented by an Eulerian, presureless and inviscid fluid. The pebble dynamics is affected by the Epstein gas drag and optionally by the diffusive effects. We also implemented the drag back-reaction term into the Navier-Stokes equation for the gas. Archive summary: ------------------------------------------------------------------------- directory/file Explanation ------------------------------------------------------------------------- /in_relax Contains setup of the first example simulation /in_wplanet Contains setup of the second

  14. Foundations of radiation hydrodynamics

    CERN Document Server

    Mihalas, Dimitri

    1999-01-01

    Radiation hydrodynamics is a broad subject that cuts across many disciplines in physics and astronomy: fluid dynamics, thermodynamics, statistical mechanics, kinetic theory, and radiative transfer, among others. The theory developed in this book by two specialists in the field can be applied to the study of such diverse astrophysical phenomena as stellar winds, supernova explosions, and the initial phases of cosmic expansion, as well as the physics of laser fusion and reentry vehicles. As such, it provides students with the basic tools for research on radiating flows.Largely self-contained,

  15. Problems in astrophysical radiation hydrodynamics

    International Nuclear Information System (INIS)

    Castor, J.I.

    1983-01-01

    The basic equations of radiation hydrodynamics are discussed in the regime that the radiation is dynamically as well as thermally important. Particular attention is paid to the question of what constitutes an acceptable approximate non-relativistic system of dynamical equations for matter and radiation in this regime. Further discussion is devoted to two classes of application of these ideas. The first class consists of problems dominated by line radiation, which is sensitive to the velocity field through the Doppler effect. The second class is of problems in which the advection of radiation by moving matter dominates radiation diffusion

  16. AGEs, RAGEs and s-RAGE; friend or foe for cancer.

    Science.gov (United States)

    Ahmad, Saheem; Khan, Hamda; Siddiqui, Zeba; Khan, Mohd Yasir; Rehman, Shahnawaz; Shahab, Uzma; Godovikova, Tatyana; Silnikov, Vladimir; Moinuddin

    2018-04-01

    Impaired awareness of glycation biology in cancer initiation and progression is one of the fundamental reasons for its meticulous investigation of the molecules involved in signalling pathway. Glycation of biological macromolecules results in the progression of advanced glycation end-products (AGEs) that proliferates the process of carcinogenesis by activation of transcription factors and release of cytokines. The receptor for advanced glycation end-products (RAGEs) with the binding of its different ligands like; AGEs, HMGB1 and S100 activate the signalling arrays. The activation of downstream signalling pathway ultimately leads to the pathophysiological conditions of diabetes, ageing, neurological disorders and cancers as well as a result of the activation of transcription factors which is discussed in the main body text of this review. However, there might be a likelihood of the positive effect of the HMGB1 and S100 proteins in cancer. Still, some untouched mechanisms might be responsible for the establishment of the function of AGE-RAGE or AGE-sRAGE axis activation that leads to the friend-foe association with the cancers. The levels of RAGE and s-RAGE may be a useful biomarker of ligand-RAGE pathway activation and cancer. Thus, the possibility of providing a potential complement to carcinogenesis is very high which might be an interesting target for therapeutic interventions. This article is an insightful assessment on AGE, RAGE and s-RAGE for its possible role in cancer onset and progression. The novel therapeutic targets for cancer prevention or inhibition are also explained in brief in relation to AGE and RAGE. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Annual Report: Hydrodynamics and Radiative Hydrodynamics with Astrophysical Applications

    Energy Technology Data Exchange (ETDEWEB)

    R. Paul Drake

    2005-12-01

    We report the ongoing work of our group in hydrodynamics and radiative hydrodynamics with astrophysical applications. During the period of the existing grant, we have carried out two types of experiments at the Omega laser. One set of experiments has studied radiatively collapsing shocks, obtaining high-quality scaling data using a backlit pinhole and obtaining the first (ever, anywhere) Thomson-scattering data from a radiative shock. Other experiments have studied the deeply nonlinear development of the Rayleigh-Taylor (RT) instability from complex initial conditions, obtaining the first (ever, anywhere) dual-axis radiographic data using backlit pinholes and ungated detectors. All these experiments have applications to astrophysics, discussed in the corresponding papers either in print or in preparation. We also have obtained preliminary radiographs of experimental targets using our x-ray source. The targets for the experiments have been assembled at Michigan, where we also prepare many of the simple components. The above activities, in addition to a variety of data analysis and design projects, provide good experience for graduate and undergraduates students. In the process of doing this research we have built a research group that uses such work to train junior scientists.

  18. A combined N-body and hydrodynamic code for modeling disk galaxies

    International Nuclear Information System (INIS)

    Schroeder, M.C.

    1989-01-01

    A combined N-body and hydrodynamic computer code for the modeling of two dimensional galaxies is described. The N-body portion of the code is used to calculate the motion of the particle component of a galaxy, while the hydrodynamics portion of the code is used to follow the motion and evolution of the fluid component. A complete description of the numerical methods used for each portion of the code is given. Additionally, the proof tests of the separate and combined portions of the code are presented and discussed. Finally, a discussion of the topics researched with the code and results obtained is presented. These include: the measurement of stellar relaxation times in disk galaxy simulations; the effects of two-armed spiral perturbations on stable axisymmetric disks; the effects of the inclusion of an instellar medium (ISM) on the stability of disk galaxies; and the effect of the inclusion of stellar evolution on disk galaxy simulations

  19. RAGE splicing variants in mammals.

    Science.gov (United States)

    Sterenczak, Katharina Anna; Nolte, Ingo; Murua Escobar, Hugo

    2013-01-01

    The receptor for advanced glycation end products (RAGE) is a multiligand receptor of environmental stressors which plays key roles in pathophysiological processes, including immune/inflammatory disorders, Alzheimer's disease, diabetic arteriosclerosis, tumorigenesis, and metastasis. Besides the full-length RAGE protein in humans nearly 20 natural occurring RAGE splicing variants were described on mRNA and protein level. These naturally occurring isoforms are characterized by either N-terminally or C-terminally truncations and are discussed as possible regulators of the full-length RAGE receptor either by competitive ligand binding or by displacing the full-length protein in the membrane. Accordingly, expression deregulations of the naturally occurring isoforms were supposed to have significant effect on RAGE-mediated disorders. Thereby the soluble C-truncated RAGE isoforms present in plasma and tissues are the mostly focused isoforms in research and clinics. Deregulations of the circulating levels of soluble RAGE forms were reported in several RAGE-associated pathological disorders including for example atherosclerosis, diabetes, renal failure, Alzheimer's disease, and several cancer types. Regarding other mammalian species, the canine RAGE gene showed high similarities to the corresponding human structures indicating RAGE to be evolutionary highly conserved between both species. Similar to humans the canine RAGE showed a complex and extensive splicing activity leading to a manifold pattern of RAGE isoforms. Due to the similarities seen in several canine and human diseases-including cancer-comparative structural and functional analyses allow the development of RAGE and ligand-specific therapeutic approaches beneficial for human and veterinary medicine.

  20. An implicit Smooth Particle Hydrodynamic code

    Energy Technology Data Exchange (ETDEWEB)

    Knapp, Charles E. [Univ. of New Mexico, Albuquerque, NM (United States)

    2000-05-01

    An implicit version of the Smooth Particle Hydrodynamic (SPH) code SPHINX has been written and is working. In conjunction with the SPHINX code the new implicit code models fluids and solids under a wide range of conditions. SPH codes are Lagrangian, meshless and use particles to model the fluids and solids. The implicit code makes use of the Krylov iterative techniques for solving large linear-systems and a Newton-Raphson method for non-linear corrections. It uses numerical derivatives to construct the Jacobian matrix. It uses sparse techniques to save on memory storage and to reduce the amount of computation. It is believed that this is the first implicit SPH code to use Newton-Krylov techniques, and is also the first implicit SPH code to model solids. A description of SPH and the techniques used in the implicit code are presented. Then, the results of a number of tests cases are discussed, which include a shock tube problem, a Rayleigh-Taylor problem, a breaking dam problem, and a single jet of gas problem. The results are shown to be in very good agreement with analytic solutions, experimental results, and the explicit SPHINX code. In the case of the single jet of gas case it has been demonstrated that the implicit code can do a problem in much shorter time than the explicit code. The problem was, however, very unphysical, but it does demonstrate the potential of the implicit code. It is a first step toward a useful implicit SPH code.

  1. Foundations of radiation hydrodynamics

    Science.gov (United States)

    Mihalas, D.; Mihalas, B. W.

    This book is the result of an attempt, over the past few years, to gather the basic tools required to do research on radiating flows in astrophysics. The microphysics of gases is discussed, taking into account the equation of state of a perfect gas, the first and second law of thermodynamics, the thermal properties of a perfect gas, the distribution function and Boltzmann's equation, the collision integral, the Maxwellian velocity distribution, Boltzmann's H-theorem, the time of relaxation, and aspects of classical statistical mechanics. Other subjects explored are related to the dynamics of ideal fluids, the dynamics of viscous and heat-conducting fluids, relativistic fluid flow, waves, shocks, winds, radiation and radiative transfer, the equations of radiation hydrodynamics, and radiating flows. Attention is given to small-amplitude disturbances, nonlinear flows, the interaction of radiation and matter, the solution of the transfer equation, acoustic waves, acoustic-gravity waves, basic concepts of special relativity, and equations of motion and energy.

  2. Detonation of high explosives in Lagrangian hydrodynamic codes using the programmed burn technique

    International Nuclear Information System (INIS)

    Berger, M.E.

    1975-09-01

    Two initiation methods were developed for improving the programmed burn technique for detonation of high explosives in smeared-shock Lagrangian hydrodynamic codes. The methods are verified by comparing the improved programmed burn with existing solutions in one-dimensional plane, converging, and diverging geometries. Deficiencies in the standard programmed burn are described. One of the initiation methods has been determined to be better for inclusion in production hydrodynamic codes

  3. A Global Three-Dimensional Radiation Hydrodynamic Simulation of a Self-Gravitating Accretion Disk

    Science.gov (United States)

    Phillipson, Rebecca; Vogeley, Michael S.; McMillan, Stephen; Boyd, Patricia

    2018-01-01

    We present three-dimensional, radiation hydrodynamic simulations of initially thin accretion disks with self-gravity using the grid-based code PLUTO. We produce simulated light curves and spectral energy distributions and compare to observational data of X-ray binary (XRB) and active galactic nuclei (AGN) variability. These simulations are of interest for modeling the role of radiation in accretion physics across decades of mass and frequency. In particular, the characteristics of the time variability in various bandwidths can probe the timescales over which different physical processes dominate the accretion flow. For example, in the case of some XRBs, superorbital periods much longer than the companion orbital period have been observed. Smoothed particle hydrodynamics (SPH) calculations have shown that irradiation-driven warping could be the mechanism underlying these long periods. In the case of AGN, irradiation-driven warping is also predicted to occur in addition to strong outflows originating from thermal and radiation pressure driving forces, which are important processes in understanding feedback and star formation in active galaxies. We compare our simulations to various toy models via traditional time series analysis of our synthetic and observed light curves.

  4. PAD: a one-dimensional, coupled neutronic-thermodynamic-hydrodynamic computer code

    International Nuclear Information System (INIS)

    Peterson, D.M.; Stratton, W.R.; McLaughlin, T.P.

    1976-12-01

    Theoretical and numerical foundations, utilization guide, sample problems, and program listing and glossary are given for the PAD computer code which describes dynamic systems with interactive neutronics, thermodynamics, and hydrodynamics in one-dimensional spherical, cylindrical, and planar geometries. The code has been applied to prompt critical excursions in various fissioning systems (solution, metal, LMFBR, etc.) as well as to nonfissioning systems

  5. Radiation hydrodynamics in the laboratory

    International Nuclear Information System (INIS)

    1985-12-01

    This report contains a collection of five preprints devoted to the subject of laser induced phenomena of radiation hydrodynamics. These preprints cover approximately the contents of the presentations made by the MPQ experimental laser-plasma group at the 17th European Conference on Laser Interaction with Matter (ECLIM), Rome, November 18-22, 1985. (orig.)

  6. Use of implicit Monte Carlo radiation transport with hydrodynamics and compton scattering

    International Nuclear Information System (INIS)

    Fleck, J.A. Jr.

    1971-03-01

    It is shown that the combination of implicit radiation transport and hydrodynamics, Compton scattering, and any other energy transport can be simply carried out by a ''splitting'' procedure. Contributions to material energy exchange can be reckoned separately for hydrodynamics, radiation transport without scattering, Compton scattering, plus any other possible energy exchange mechanism. The radiation transport phase of the calculation would be implicit, but the hydrodynamics and Compton portions would not, leading to possible time step controls. The time step restrictions which occur on radiation transfer due to large Planck mean absorption cross-sections would not occur

  7. 2D RADIATION-HYDRODYNAMIC SIMULATIONS OF SUPERNOVA SHOCK BREAKOUT IN BIPOLAR EXPLOSIONS OF A BLUE SUPERGIANT PROGENITOR

    Energy Technology Data Exchange (ETDEWEB)

    Suzuki, Akihiro; Maeda, Keiichi [Department of Astronomy, Kyoto University, Kitashirakawa-Oiwake-cho, Sakyo-ku, Kyoto, 606-8502 (Japan); Shigeyama, Toshikazu [Research Center for the Early Universe, School of Science, University of Tokyo, Bunkyo-ku, Tokyo, 113-0033 (Japan)

    2016-07-10

    A two-dimensional special relativistic radiation-hydrodynamics code is developed and applied to numerical simulations of supernova shock breakout in bipolar explosions of a blue supergiant. Our calculations successfully simulate the dynamical evolution of a blast wave in the star and its emergence from the surface. Results of the model with spherical energy deposition show a good agreement with previous simulations. Furthermore, we calculate several models with bipolar energy deposition and compare their results with the spherically symmetric model. The bolometric light curves of the shock breakout emission are calculated by a ray-tracing method. Our radiation-hydrodynamic models indicate that the early part of the shock breakout emission can be used to probe the geometry of the blast wave produced as a result of the gravitational collapse of the iron core.

  8. "Uproar, bulk, rage, suffocation, effort unceasing, frenzied and vain": Beckett's Transports of Rage.

    Science.gov (United States)

    Smith, Russell

    2016-06-01

    In a 1961 interview, Beckett warded off philosophical interpretations of his work: 'I'm no intellectual. All I am is feeling'. Despite the emotional intensity of Beckett's post-war writing, Beckett criticism has tended to ignore this claim, preferring the kinds of philosophical readings that Beckett here rejects. In particular, Beckett criticism underestimates the element of rage in his work. This paper argues that Beckett's post-war breakthrough is enabled by a radical reconsideration of the nature of feeling and of rage in particular. It involves the rejection of the idea of rage as pathological and the embrace of a positive conception of rage as drive or compulsion, a locus of energy and even pleasure.This paper reads the 'Moran' section of Molloy as a kind of 'rage fable', drawing on the ancient Greek concept of thymos, of anger as a virtue. It draws on Alfred Adler's theory of the 'masculine protest', with which Beckett was familiar from his extensive note-taking on Adler in 1934-5, and Sianne Ngai's discussion of the distinction between irritation and rage. According to this reading, Moran's report charts a narrative of thymotic liberation from the irritations of servitude, prefiguring the Unnamable's abandonment to impersonal affective intensities. It ends by suggesting that the prose of the Trilogy might be better understood, not as a 'syntax of weakness' but as a 'syntax of rage', a stylistic correlative of the imperious drive of thymos. We might then begin to understand the Trilogy as the epic of a heroic, impersonal, implacable and liberated rage.

  9. Monte Carlo closure for moment-based transport schemes in general relativistic radiation hydrodynamic simulations

    Science.gov (United States)

    Foucart, Francois

    2018-04-01

    General relativistic radiation hydrodynamic simulations are necessary to accurately model a number of astrophysical systems involving black holes and neutron stars. Photon transport plays a crucial role in radiatively dominated accretion discs, while neutrino transport is critical to core-collapse supernovae and to the modelling of electromagnetic transients and nucleosynthesis in neutron star mergers. However, evolving the full Boltzmann equations of radiative transport is extremely expensive. Here, we describe the implementation in the general relativistic SPEC code of a cheaper radiation hydrodynamic method that theoretically converges to a solution of Boltzmann's equation in the limit of infinite numerical resources. The algorithm is based on a grey two-moment scheme, in which we evolve the energy density and momentum density of the radiation. Two-moment schemes require a closure that fills in missing information about the energy spectrum and higher order moments of the radiation. Instead of the approximate analytical closure currently used in core-collapse and merger simulations, we complement the two-moment scheme with a low-accuracy Monte Carlo evolution. The Monte Carlo results can provide any or all of the missing information in the evolution of the moments, as desired by the user. As a first test of our methods, we study a set of idealized problems demonstrating that our algorithm performs significantly better than existing analytical closures. We also discuss the current limitations of our method, in particular open questions regarding the stability of the fully coupled scheme.

  10. Code Differentiation for Hydrodynamic Model Optimization

    Energy Technology Data Exchange (ETDEWEB)

    Henninger, R.J.; Maudlin, P.J.

    1999-06-27

    Use of a hydrodynamics code for experimental data fitting purposes (an optimization problem) requires information about how a computed result changes when the model parameters change. These so-called sensitivities provide the gradient that determines the search direction for modifying the parameters to find an optimal result. Here, the authors apply code-based automatic differentiation (AD) techniques applied in the forward and adjoint modes to two problems with 12 parameters to obtain these gradients and compare the computational efficiency and accuracy of the various methods. They fit the pressure trace from a one-dimensional flyer-plate experiment and examine the accuracy for a two-dimensional jet-formation problem. For the flyer-plate experiment, the adjoint mode requires similar or less computer time than the forward methods. Additional parameters will not change the adjoint mode run time appreciably, which is a distinct advantage for this method. Obtaining ''accurate'' sensitivities for the j et problem parameters remains problematic.

  11. The Coupling of Radiation and Hydrodynamics

    International Nuclear Information System (INIS)

    Lowrie, R.B.; Morel, J.E.; Hittinger, J.A.

    1999-01-01

    The coupling of radiation transport and hydrodynamics is discussed for the Eulerian frame. The discussion is aimed at developing a suitable set of equations for nonrelativistic radiation hydrodynamics (RHD) that can be numerically integrated using high-resolution methods for conservation laws. We outline how numerical methods based on a wave decomposition may be developed, along with the importance of conservation, particularly in the equilibrium regime. The properties of the RHD equations are examined through asymptotic and dispersion analyses. The conditions required to obtain the classical equilibrium limit are rigorously studied. The results show that a simple coupling term developed recently by Morel, which retains a minimum of relativistic corrections, may be sufficient for nonrelativistic flows. We also give two constraints on the relativistic corrections that result in retaining terms on the order of the truncation. In addition, the dispersion results for the P 1 approximation are studied in detail and are compared with both the exact-transport results and a full relativistic treatment. We also examine some nonintuitive behavior in the dispersion results. copyright copyright 1999. The American Astronomical Society

  12. A Multigroup diffusion solver using pseudo transient continuation for a radiation-hydrodynamic code with patch-based AMR

    Energy Technology Data Exchange (ETDEWEB)

    Shestakov, A I; Offner, S R

    2006-09-21

    We present a scheme to solve the nonlinear multigroup radiation diffusion (MGD) equations. The method is incorporated into a massively parallel, multidimensional, Eulerian radiation-hydrodynamic code with adaptive mesh refinement (AMR). The patch-based AMR algorithm refines in both space and time creating a hierarchy of levels, coarsest to finest. The physics modules are time-advanced using operator splitting. On each level, separate 'level-solve' packages advance the modules. Our multigroup level-solve adapts an implicit procedure which leads to a two-step iterative scheme that alternates between elliptic solves for each group with intra-cell group coupling. For robustness, we introduce pseudo transient continuation ({Psi}tc). We analyze the magnitude of the {Psi}tc parameter to ensure positivity of the resulting linear system, diagonal dominance and convergence of the two-step scheme. For AMR, a level defines a subdomain for refinement. For diffusive processes such as MGD, the refined level uses Dirichet boundary data at the coarse-fine interface and the data is derived from the coarse level solution. After advancing on the fine level, an additional procedure, the sync-solve (SS), is required in order to enforce conservation. The MGD SS reduces to an elliptic solve on a combined grid for a system of G equations, where G is the number of groups. We adapt the 'partial temperature' scheme for the SS; hence, we reuse the infrastructure developed for scalar equations. Results are presented. We consider a multigroup test problem with a known analytic solution. We demonstrate utility of {Psi}tc by running with increasingly larger timesteps. Lastly, we simulate the sudden release of energy Y inside an Al sphere (r = 15 cm) suspended in air at STP. For Y = 11 kT, we find that gray radiation diffusion and MGD produce similar results. However, if Y = 1 MT, the two packages yield different results. Our large Y simulation contradicts a long-standing theory

  13. Flux-limited diffusion models in radiation hydrodynamics

    International Nuclear Information System (INIS)

    Pomraning, G.C.; Szilard, R.H.

    1993-01-01

    The authors discuss certain flux-limited diffusion theories which approximately describe radiative transfer in the presence of steep spatial gradients. A new formulation is presented which generalizes a flux-limited description currently in widespread use for large radiation hydrodynamic calculations. This new formation allows more than one Case discrete mode to be described by a flux-limited diffusion equation. Such behavior is not extant in existing formulations. Numerical results predicted by these flux-limited diffusion models are presented for radiation penetration into an initially cold halfspace. 37 refs., 5 figs

  14. General relativistic radiative transfer code in rotating black hole space-time: ARTIST

    Science.gov (United States)

    Takahashi, Rohta; Umemura, Masayuki

    2017-02-01

    We present a general relativistic radiative transfer code, ARTIST (Authentic Radiative Transfer In Space-Time), that is a perfectly causal scheme to pursue the propagation of radiation with absorption and scattering around a Kerr black hole. The code explicitly solves the invariant radiation intensity along null geodesics in the Kerr-Schild coordinates, and therefore properly includes light bending, Doppler boosting, frame dragging, and gravitational redshifts. The notable aspect of ARTIST is that it conserves the radiative energy with high accuracy, and is not subject to the numerical diffusion, since the transfer is solved on long characteristics along null geodesics. We first solve the wavefront propagation around a Kerr black hole that was originally explored by Hanni. This demonstrates repeated wavefront collisions, light bending, and causal propagation of radiation with the speed of light. We show that the decay rate of the total energy of wavefronts near a black hole is determined solely by the black hole spin in late phases, in agreement with analytic expectations. As a result, the ARTIST turns out to correctly solve the general relativistic radiation fields until late phases as t ˜ 90 M. We also explore the effects of absorption and scattering, and apply this code for a photon wall problem and an orbiting hotspot problem. All the simulations in this study are performed in the equatorial plane around a Kerr black hole. The ARTIST is the first step to realize the general relativistic radiation hydrodynamics.

  15. A TWO-MOMENT RADIATION HYDRODYNAMICS MODULE IN ATHENA USING A TIME-EXPLICIT GODUNOV METHOD

    Energy Technology Data Exchange (ETDEWEB)

    Skinner, M. Aaron; Ostriker, Eve C., E-mail: askinner@astro.umd.edu, E-mail: eco@astro.princeton.edu [Department of Astronomy, University of Maryland, College Park, MD 20742-2421 (United States)

    2013-06-01

    We describe a module for the Athena code that solves the gray equations of radiation hydrodynamics (RHD), based on the first two moments of the radiative transfer equation. We use a combination of explicit Godunov methods to advance the gas and radiation variables including the non-stiff source terms, and a local implicit method to integrate the stiff source terms. We adopt the M{sub 1} closure relation and include all leading source terms to O({beta}{tau}). We employ the reduced speed of light approximation (RSLA) with subcycling of the radiation variables in order to reduce computational costs. Our code is dimensionally unsplit in one, two, and three space dimensions and is parallelized using MPI. The streaming and diffusion limits are well described by the M{sub 1} closure model, and our implementation shows excellent behavior for a problem with a concentrated radiation source containing both regimes simultaneously. Our operator-split method is ideally suited for problems with a slowly varying radiation field and dynamical gas flows, in which the effect of the RSLA is minimal. We present an analysis of the dispersion relation of RHD linear waves highlighting the conditions of applicability for the RSLA. To demonstrate the accuracy of our method, we utilize a suite of radiation and RHD tests covering a broad range of regimes, including RHD waves, shocks, and equilibria, which show second-order convergence in most cases. As an application, we investigate radiation-driven ejection of a dusty, optically thick shell in the ISM. Finally, we compare the timing of our method with other well-known iterative schemes for the RHD equations. Our code implementation, Hyperion, is suitable for a wide variety of astrophysical applications and will be made freely available on the Web.

  16. Cloning, characterisation, and comparative quantitative expression analyses of receptor for advanced glycation end products (RAGE) transcript forms.

    Science.gov (United States)

    Sterenczak, Katharina A; Willenbrock, Saskia; Barann, Matthias; Klemke, Markus; Soller, Jan T; Eberle, Nina; Nolte, Ingo; Bullerdiek, Jörn; Murua Escobar, Hugo

    2009-04-01

    RAGE is a member of the immunoglobulin superfamily of cell surface molecules playing key roles in pathophysiological processes, e.g. immune/inflammatory disorders, Alzheimer's disease, diabetic arteriosclerosis and tumourigenesis. In humans 19 naturally occurring RAGE splicing variants resulting in either N-terminally or C-terminally truncated proteins were identified and are lately discussed as mechanisms for receptor regulation. Accordingly, deregulation of sRAGE levels has been associated with several diseases e.g. Alzheimer's disease, Type 1 diabetes, and rheumatoid arthritis. Administration of recombinant sRAGE to animal models of cancer blocked tumour growth successfully. In spite of its obvious relationship to cancer and metastasis data focusing sRAGE deregulation and tumours is rare. In this study we screened a set of tumours, healthy tissues and various cancer cell lines for RAGE splicing variants and analysed their structure. Additionally, we analysed the ratio of the mainly found transcript variants using quantitative Real-Time PCR. In total we characterised 24 previously not described canine and 4 human RAGE splicing variants, analysed their structure, classified their characteristics, and derived their respective protein forms. Interestingly, the healthy and the neoplastic tissue samples showed in majority RAGE transcripts coding for the complete receptor and transcripts showing insertions of intron 1.

  17. Protection against RAGE-mediated neuronal cell death by sRAGE-secreting human mesenchymal stem cells in 5xFAD transgenic mouse model.

    Science.gov (United States)

    Son, Myeongjoo; Oh, Seyeon; Park, Hyunjin; Ahn, Hyosang; Choi, Junwon; Kim, Hyungho; Lee, Hye Sun; Lee, Sojung; Park, Hye-Jeong; Kim, Seung U; Lee, Bonghee; Byun, Kyunghee

    2017-11-01

    Alzheimer's disease (AD), which is the most commonly encountered neurodegenerative disease, causes synaptic dysfunction and neuronal loss due to various pathological processes that include tau abnormality and amyloid beta (Aβ) accumulation. Aβ stimulates the secretion and the synthesis of Receptor for Advanced Glycation End products (RAGE) ligand by activating microglial cells, and has been reported to cause neuronal cell death in Aβ 1-42 treated rats and in mice with neurotoxin-induced Parkinson's disease. The soluble form of RAGE (sRAGE) is known to reduce inflammation, and to decrease microglial cell activation and Aβ deposition, and thus, it protects from neuronal cell death in AD. However, sRAGE protein has too a short half-life for therapeutic purposes. We developed sRAGE-secreting umbilical cord derived mesenchymal stem cells (sRAGE-MSCs) to enhance the inhibitory effects of sRAGE on Aβ deposition and to reduce the secretion and synthesis of RAGE ligands in 5xFAD mice. In addition, these cells improved the viability of injected MSCs, and enhanced the protective effects of sRAGE by inhibiting the binding of RAGE and RAGE ligands in 5xFAD mice. These findings suggest sRAGE protein from sRAGE-MSCs has better protection against neuronal cell death than sRAGE protein or single MSC treatment by inhibiting the RAGE cell death cascade and RAGE-induce inflammation. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. Concatenating algorithms for parallel numerical simulations coupling radiation hydrodynamics with neutron transport

    International Nuclear Information System (INIS)

    Mo Zeyao

    2004-11-01

    Multiphysics parallel numerical simulations are usually essential to simplify researches on complex physical phenomena in which several physics are tightly coupled. It is very important on how to concatenate those coupled physics for fully scalable parallel simulation. Meanwhile, three objectives should be balanced, the first is efficient data transfer among simulations, the second and the third are efficient parallel executions and simultaneously developments of those simulation codes. Two concatenating algorithms for multiphysics parallel numerical simulations coupling radiation hydrodynamics with neutron transport on unstructured grid are presented. The first algorithm, Fully Loosely Concatenation (FLC), focuses on the independence of code development and the independence running with optimal performance of code. The second algorithm. Two Level Tightly Concatenation (TLTC), focuses on the optimal tradeoffs among above three objectives. Theoretical analyses for communicational complexity and parallel numerical experiments on hundreds of processors on two parallel machines have showed that these two algorithms are efficient and can be generalized to other multiphysics parallel numerical simulations. In especial, algorithm TLTC is linearly scalable and has achieved the optimal parallel performance. (authors)

  19. Advances in radiation-hydrodynamics and atomic physics simulation for current and new neutron-less targets

    International Nuclear Information System (INIS)

    Velarde, G.; Minguez, E.; Bravo, E.

    2003-01-01

    We present advances in advanced fusion cycles, atomic physics and radiation hydrodynamics. With ARWEN code we analyze a target design for ICF based on jet production. ARWEN is 2D Adaptive Mesh Refinement fluid dynamic and multigroup radiation transport. We are designing, by using also ARWEN, a target for laboratory simulation of astrophysical phenomena. We feature an experimental device to reproduce collisions of two shock waves, scaled to roughly represent cosmic supernova remnants. Opacity calculations are obtained with ANALOP code, which uses parametric potentials fitting to self-consistent potentials. It includes temperature and density effects by linearized Debye-Hueckel and it treats excited configurations and H+He-like lines. Advanced fusion cycles, as the a neutronic proton-boron 11 reaction, require very high ignition temperatures. Plasma conditions for a fusion-burning wave to propagate at such temperatures are rather extreme and complex, because of the overlapping effects of the main energy transport mechanisms. Calculations on the most appropriate ICF regimes for this purpose are presented. (author)

  20. A two-dimensional hydrodynamic code for the interaction of intense heavy ion beams with matter based on the code CONCHAS SPRAY

    International Nuclear Information System (INIS)

    Schneider, V.; Rentzsch, T.; Maruhn, J.

    1988-04-01

    In this report we describe a two-dimensional hydrodynamic code applicable to the problems stated. In section II we describe the algorithm solving the hydrodynamic equations. In section III we present test calculations involving the propagation of shocks and contact discontinuities as well as the growth of a Rayleigh-Taylor Instability (RTI). Section IV includes all the modifications and supplements required to use the code to investigate the interaction of intense HI beams with matter. Numcerical simulations of experiments using the RFQ facility and the planned SIS-ESR at GSI are finally discussed in section V. (orig./HSI)

  1. THEHYCO-3DT: Thermal hydrodynamic code for the 3 dimensional transient calculation of advanced LMFBR core

    Energy Technology Data Exchange (ETDEWEB)

    Vitruk, S.G.; Korsun, A.S. [Moscow Engineering Physics Institute (Russian Federation); Ushakov, P.A. [Institute of Physics and Power Engineering, Obninsk (R)] [and others

    1995-09-01

    The multilevel mathematical model of neutron thermal hydrodynamic processes in a passive safety core without assemblies duct walls and appropriate computer code SKETCH, consisted of thermal hydrodynamic module THEHYCO-3DT and neutron one, are described. A new effective discretization technique for energy, momentum and mass conservation equations is applied in hexagonal - z geometry. The model adequacy and applicability are presented. The results of the calculations show that the model and the computer code could be used in conceptual design of advanced reactors.

  2. THEHYCO-3DT: Thermal hydrodynamic code for the 3 dimensional transient calculation of advanced LMFBR core

    International Nuclear Information System (INIS)

    Vitruk, S.G.; Korsun, A.S.; Ushakov, P.A.

    1995-01-01

    The multilevel mathematical model of neutron thermal hydrodynamic processes in a passive safety core without assemblies duct walls and appropriate computer code SKETCH, consisted of thermal hydrodynamic module THEHYCO-3DT and neutron one, are described. A new effective discretization technique for energy, momentum and mass conservation equations is applied in hexagonal - z geometry. The model adequacy and applicability are presented. The results of the calculations show that the model and the computer code could be used in conceptual design of advanced reactors

  3. CoCoNuT: General relativistic hydrodynamics code with dynamical space-time evolution

    Science.gov (United States)

    Dimmelmeier, Harald; Novak, Jérôme; Cerdá-Durán, Pablo

    2012-02-01

    CoCoNuT is a general relativistic hydrodynamics code with dynamical space-time evolution. The main aim of this numerical code is the study of several astrophysical scenarios in which general relativity can play an important role, namely the collapse of rapidly rotating stellar cores and the evolution of isolated neutron stars. The code has two flavors: CoCoA, the axisymmetric (2D) magnetized version, and CoCoNuT, the 3D non-magnetized version.

  4. Numerical simulations of radiation hydrodynamics and modeling of high temperature hohlraum cavities

    International Nuclear Information System (INIS)

    Gupta, N.K.; Godwal, B.K.

    2003-10-01

    A summary of our efforts towards the validation of radiation hydrodynamics and opacity models are presented. Effects of various parameters on the radiation temperature inside an inertial confinement fusion (ICF) hohlraum, the effects of non-local thermodynamic equilibrium conditions on emission and absorption, and the hydrodynamics of aluminium and gold foils driven by radiation are studied. LTE and non-LTE predictions for emitted radiation are compared with the experimental results and it is seen that non-LTE simulations show a marked improvement over LTE results. It is shown that the mixing of two high Z materials can lead to an enhancement in the Rosseland mean. An experimental study of soft x-ray emission from laser-irradiated Au-Cu mix-Z targets confirmed these predictions. It is seen that only multi group non-LTE radiation transport is able to explain experimentally observed features in the conversion efficiency of laser light to x-rays. One group radiation transport under predicts the radiation temperature. It is shown that erroneous results can be obtained if the space mesh in the hohlraum wall is not fine enough. Hydrodynamics of a wedge shaped aluminium foil driven by the hohlraum radiation is also presented and results are compared with NOVA laser experiments. Laser driven shock wave EOS and gold hohlraum experiments carried out at CAT are analyzed and they confirmed our theoretical estimates. (author)

  5. On an incompressible model in radiation hydrodynamics

    Czech Academy of Sciences Publication Activity Database

    Ducomet, B.; Nečasová, Šárka

    2015-01-01

    Roč. 38, č. 4 (2015), s. 765-774 ISSN 0170-4214 R&D Projects: GA ČR GA13-00522S Institutional support: RVO:67985840 Keywords : radiation hydrodynamics * incompressible Navier-Stokes-Fourier system * weak solution Subject RIV: BA - General Mathematics Impact factor: 1.002, year: 2015 http://onlinelibrary.wiley.com/doi/10.1002/mma.3107/abstract

  6. Annual Report 2006 for Hydrodynamics and Radiation Hydrodynamics with Astrophysical Applications

    Energy Technology Data Exchange (ETDEWEB)

    R. Paul Drake

    2007-04-05

    We report the ongoing work of our group in hydrodynamics and radiation hydrodynamics with astrophysical applications. During the period of the existing grant, we have carried out two types of experiments at the Omega laser. One set of experiments has studied radiatively collapsing shocks, obtaining data using a backlit pinhole with a 100 ps backlighter and beginning to develop the ability to look into the shock tube with optical or x-ray diagnostics. Other experiments have studied the deeply nonlinear development of the Rayleigh-Taylor (RT) instability from complex initial conditions, using dual-axis radiographic data with backlit pinholes and ungated detectors to complete the data set for a Ph.D. student. We lead a team that is developing a proposal for experiments at the National Ignition Facility and are involved in experiments at NIKE and LIL. All these experiments have applications to astrophysics, discussed in the corresponding papers. We assemble the targets for the experiments at Michigan, where we also prepare many of the simple components. We also have several projects underway in our laboratory involving our x-ray source. The above activities, in addition to a variety of data analysis and design projects, provide good experience for graduate and undergraduates students. In the process of doing this research we have built a research group that uses such work to train junior scientists.

  7. RAGE, receptor of advanced glycation endoproducts, negatively regulates chondrocytes differentiation.

    Directory of Open Access Journals (Sweden)

    Tatsuya Kosaka

    Full Text Available RAGE, receptor for advanced glycation endoproducts (AGE, has been characterized as an activator of osteoclastgenesis. However, whether RAGE directly regulates chondrocyte proliferation and differentiation is unclear. Here, we show that RAGE has an inhibitory role in chondrocyte differentiation. RAGE expression was observed in chondrocytes from the prehypertrophic to hypertrophic regions. In cultured cells, overexpression of RAGE or dominant-negative-RAGE (DN-RAGE demonstrated that RAGE inhibited cartilaginous matrix production, while DN-RAGE promoted production. Additionally, RAGE regulated Ihh and Col10a1 negatively but upregulated PTHrP receptor. Ihh promoter analysis and real-time PCR analysis suggested that downregulation of Cdxs was the key for RAGE-induced inhibition of chondrocyte differentiation. Overexpression of the NF-κB inhibitor I-κB-SR inhibited RAGE-induced NF-κB activation, but did not influence inhibition of cartilaginous matrix production by RAGE. The inhibitory action of RAGE was restored by the Rho family GTPases inhibitor Toxin B. Furthermore, inhibitory action on Ihh, Col10a1 and Cdxs was reproduced by constitutively active forms, L63RhoA, L61Rac, and L61Cdc42, but not by I-κB-SR. Cdx1 induced Ihh and Col10a1 expressions and directly interacted with Ihh promoter. Retinoic acid (RA partially rescued the inhibitory action of RAGE. These data combined suggests that RAGE negatively regulates chondrocyte differentiation at the prehypertrophic stage by modulating NF-κB-independent and Rho family GTPases-dependent mechanisms.

  8. Women's experience of rage: a critical feminist analysis.

    Science.gov (United States)

    Flemke, Kimberly; Allen, Katherine R

    2008-01-01

    We conducted in-depth interviews with 37 incarcerated women on their experience of rage towards their intimate partner. Participants used specific criteria to distinguish their experience of rage from anger. Rage is described as an overwhelming experience with particular physiological and cognitive changes that takes control of a woman's emotions and actions. In contrast, anger is described as a controllable emotion with a specific termination point. Motivations for acting violently in rage with an intimate partner are described and discussed. Findings suggest a primary trigger for experiencing rage is feeling threatened and feeling emotionally overwhelmed.

  9. A HYDROCHEMICAL HYBRID CODE FOR ASTROPHYSICAL PROBLEMS. I. CODE VERIFICATION AND BENCHMARKS FOR A PHOTON-DOMINATED REGION (PDR)

    International Nuclear Information System (INIS)

    Motoyama, Kazutaka; Morata, Oscar; Hasegawa, Tatsuhiko; Shang, Hsien; Krasnopolsky, Ruben

    2015-01-01

    A two-dimensional hydrochemical hybrid code, KM2, is constructed to deal with astrophysical problems that would require coupled hydrodynamical and chemical evolution. The code assumes axisymmetry in a cylindrical coordinate system and consists of two modules: a hydrodynamics module and a chemistry module. The hydrodynamics module solves hydrodynamics using a Godunov-type finite volume scheme and treats included chemical species as passively advected scalars. The chemistry module implicitly solves nonequilibrium chemistry and change of energy due to thermal processes with transfer of external ultraviolet radiation. Self-shielding effects on photodissociation of CO and H 2 are included. In this introductory paper, the adopted numerical method is presented, along with code verifications using the hydrodynamics module and a benchmark on the chemistry module with reactions specific to a photon-dominated region (PDR). Finally, as an example of the expected capability, the hydrochemical evolution of a PDR is presented based on the PDR benchmark

  10. Pentamidine blocks the interaction between mutant S100A5 and RAGE V domain and inhibits the RAGE signaling pathway

    Energy Technology Data Exchange (ETDEWEB)

    Cho, Ching Chang, E-mail: ccjwo@yahoo.com.tw [Department of Chemistry, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu 30013, Taiwan (China); Chou, Ruey Hwang, E-mail: rhchou@mail.cmu.edu.tw [Graduate Institute of Cancer Biology and Center for Molecular Medicine, China Medical University, No.91, Hsueh-Shih Road, Taichung 40402, Taiwan (China); Yu, Chin, E-mail: cyu.nthu@gmail.com [Department of Chemistry, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu 30013, Taiwan (China)

    2016-08-19

    The human S100 protein family contains small, dimeric and acidic proteins that contain two EF-hand motifs and bind calcium. When S100A5 binds calcium, its conformation changes and promotes interaction with the target protein. The extracellular domain of RAGE (Receptor of Advanced Glycation End products) contain three domains: C1, C2 and V. The RAGE V domain is the target protein of S100A5 that promotes cell survival, growth and differentiation by activating several signaling pathways. Pentamidine is an apoptotic and antiparasitic drug that is used to treat or prevent pneumonia. Here, we found that pentamidine interacts with S100A5 using HSQC titration. We elucidated the interactions of S100A5 with RAGE V domain and pentamidine using fluorescence and NMR spectroscopy. We generated two binary models—the S100A5-RAGE V domain and S100A5-Pentamidine complex—and then observed that the pentamidine and RAGE V domain share a similar binding region in mS100A5. We also used the WST-1 assay to investigate the bioactivity of S100A5, RAGE V domain and pentamidine. These results indicated that pentamidine blocks the binding between S100A5 and RAGE V domain. This finding is useful for the development of new anti-proliferation drugs. - Highlights: • The interaction between mS100A5–RAGE V was investigated by fluorescence spectroscopy. • The interfacial residues on mS100A5–RAGE V and mS100A5–pentamidine contact surface were mapped by {sup 1}H-{sup 15}N HSQC experiments. • mS100A5–RAGE V and mS100A5–pentamidine complex models were generated from NMR restraints using HADDOCK program. • The bioactivity of the mS100A5–RAGE V and mS100A5–pentamidine complex was studied using WST-1 assay.

  11. CHOLLA: A NEW MASSIVELY PARALLEL HYDRODYNAMICS CODE FOR ASTROPHYSICAL SIMULATION

    International Nuclear Information System (INIS)

    Schneider, Evan E.; Robertson, Brant E.

    2015-01-01

    We present Computational Hydrodynamics On ParaLLel Architectures (Cholla ), a new three-dimensional hydrodynamics code that harnesses the power of graphics processing units (GPUs) to accelerate astrophysical simulations. Cholla models the Euler equations on a static mesh using state-of-the-art techniques, including the unsplit Corner Transport Upwind algorithm, a variety of exact and approximate Riemann solvers, and multiple spatial reconstruction techniques including the piecewise parabolic method (PPM). Using GPUs, Cholla evolves the fluid properties of thousands of cells simultaneously and can update over 10 million cells per GPU-second while using an exact Riemann solver and PPM reconstruction. Owing to the massively parallel architecture of GPUs and the design of the Cholla code, astrophysical simulations with physically interesting grid resolutions (≳256 3 ) can easily be computed on a single device. We use the Message Passing Interface library to extend calculations onto multiple devices and demonstrate nearly ideal scaling beyond 64 GPUs. A suite of test problems highlights the physical accuracy of our modeling and provides a useful comparison to other codes. We then use Cholla to simulate the interaction of a shock wave with a gas cloud in the interstellar medium, showing that the evolution of the cloud is highly dependent on its density structure. We reconcile the computed mixing time of a turbulent cloud with a realistic density distribution destroyed by a strong shock with the existing analytic theory for spherical cloud destruction by describing the system in terms of its median gas density

  12. CHOLLA: A NEW MASSIVELY PARALLEL HYDRODYNAMICS CODE FOR ASTROPHYSICAL SIMULATION

    Energy Technology Data Exchange (ETDEWEB)

    Schneider, Evan E.; Robertson, Brant E. [Steward Observatory, University of Arizona, 933 North Cherry Avenue, Tucson, AZ 85721 (United States)

    2015-04-15

    We present Computational Hydrodynamics On ParaLLel Architectures (Cholla ), a new three-dimensional hydrodynamics code that harnesses the power of graphics processing units (GPUs) to accelerate astrophysical simulations. Cholla models the Euler equations on a static mesh using state-of-the-art techniques, including the unsplit Corner Transport Upwind algorithm, a variety of exact and approximate Riemann solvers, and multiple spatial reconstruction techniques including the piecewise parabolic method (PPM). Using GPUs, Cholla evolves the fluid properties of thousands of cells simultaneously and can update over 10 million cells per GPU-second while using an exact Riemann solver and PPM reconstruction. Owing to the massively parallel architecture of GPUs and the design of the Cholla code, astrophysical simulations with physically interesting grid resolutions (≳256{sup 3}) can easily be computed on a single device. We use the Message Passing Interface library to extend calculations onto multiple devices and demonstrate nearly ideal scaling beyond 64 GPUs. A suite of test problems highlights the physical accuracy of our modeling and provides a useful comparison to other codes. We then use Cholla to simulate the interaction of a shock wave with a gas cloud in the interstellar medium, showing that the evolution of the cloud is highly dependent on its density structure. We reconcile the computed mixing time of a turbulent cloud with a realistic density distribution destroyed by a strong shock with the existing analytic theory for spherical cloud destruction by describing the system in terms of its median gas density.

  13. AGE-RAGE Stress, Stressors, and Antistressors in Health and Disease.

    Science.gov (United States)

    Prasad, Kailash; Mishra, Manish

    2018-03-01

    Adverse effects of advanced glycation end-products (AGEs) on the tissues are through nonreceptor- and receptor-mediated mechanisms. In the receptor-mediated mechanism, interaction of AGEs with its cell-bound receptor of AGE (RAGE) increases generation of oxygen radicals, activates nuclear factor-kappa B, and increases expression and release of pro-inflammatory cytokines resulting in the cellular damage. The deleterious effects of AGE and AGE-RAGE interaction are coined as "AGE-RAGE stress." The body is equipped with defense mechanisms to counteract the adverse effects of AGE and RAGE through endogenous enzymatic (glyoxalase 1, glyoxalase 2) and AGE receptor-mediated (AGER1, AGER2) degradation of AGE, and through elevation of soluble receptor of AGE (sRAGE). Exogenous defense mechanisms include reduction in consumption of AGE, prevention of AGE formation, and downregulation of RAGE expression. We have coined AGE and RAGE as "stressors" and the defense mechanisms as "anti-stressors." AGE-RAGE stress is defined as a shift in the balance between stressors and antistressors in the favor of stressors. Measurements of stressors or antistressors alone would not assess AGE-RAGE stress. For true assessment of AGE-RAGE stress, the equation should include all the stressors and antistressors. The equation for AGE-RAGE stress, therefore, would be the ratio of AGE + RAGE/sRAGE + glyoxalase1 + glyoxalase 2 + AGER1 +AGER2. This is, however, not practical in patients. AGE-RAGE stress may be assessed simply by the ratio of AGE/sRAGE. A high ratio of AGE/sRAGE indicates a relative shift in stressors from antistressors, suggesting the presence of AGE-RAGE stress, resulting in tissue damage, initiation, and progression of the diseases and their complications.

  14. GRADSPH: A parallel smoothed particle hydrodynamics code for self-gravitating astrophysical fluid dynamics

    NARCIS (Netherlands)

    Vanaverbeke, S.; Keppens, R.; Poedts, S.; Boffin, H.

    2009-01-01

    We describe the algorithms implemented in the first version of GRADSPH, a parallel, tree-based, smoothed particle hydrodynamics code for simulating self-gravitating astrophysical systems written in FORTRAN 90. The paper presents details on the implementation of the Smoothed Particle Hydro (SPH)

  15. REFLA-1D/MODE3: a computer code for reflood thermo-hydrodynamic analysis during PWR-LOCA

    International Nuclear Information System (INIS)

    Murao, Yoshio; Okubo, Tsutomu; Sugimoto, Jun; Iguchi, Tadashi; Sudoh, Takashi.

    1985-02-01

    This manual describes the REFLA-1D/MODE3 reflood system analysis code. This code can solve the core thermo-hydrodynamics under forced flooding conditions and gravity feed conditions in a system similar to FLECHT-SET Phase A. This manual describes the REFLA-1D/MODE3 models and provides application information required to utilize the code. (author)

  16. Annual Scientific Report 2006 for Hydrodynamics and Radiation Hydrodynamics with Astrophysical Applications

    International Nuclear Information System (INIS)

    R. Paul Drake

    2007-01-01

    We report the ongoing work of our group in hydrodynamics and radiation hydrodynamics with astrophysical applications. During the period of the existing grant, we have carried out two types of experiments at the Omega laser. One set of experiments has studied radiatively collapsing shocks, obtaining data using a backlit pinhole with a 100 ps backlighter and beginning to develop the ability to look into the shock tube with optical or x-ray diagnostics. Other experiments have studied the deeply nonlinear development of the Rayleigh-Taylor (RT) instability from complex initial conditions, using dual-axis radiographic data with backlit pinholes and ungated detectors to complete the data set for a Ph.D. student. We lead a team that is developing a proposal for experiments at the National Ignition Facility and are involved in experiments at NIKE and LIL. All these experiments have applications to astrophysics, discussed in the corresponding papers. We assemble the targets for the experiments at Michigan, where we also prepare many of the simple components. We also have several projects underway in our laboratory involving our x-ray source. The above activities, in addition to a variety of data analysis and design projects, provide good experience for graduate and undergraduates students. In the process of doing this research we have built a research group that uses such work to train junior scientists

  17. Low-molecular weight fractions of Japanese soy sauce act as a RAGE antagonist via inhibition of RAGE trafficking to lipid rafts.

    Science.gov (United States)

    Munesue, Seiichi; Yamamoto, Yasuhiko; Urushihara, Ryouta; Inomata, Kouhei; Saito, Hidehito; Motoyoshi, So; Watanabe, Takuo; Yonekura, Hideto; Yamamoto, Hiroshi

    2013-12-01

    Advanced glycation end-products (AGE) have been implicated in aging and the pathogenesis of diabetic complications, inflammation, Alzheimer's disease, and cancer. AGE engage the cell surface receptor for AGE (RAGE), which in turn elicits intracellular signaling, leading to activation of NF-κB to cause deterioration of tissue homeostasis. AGE are not only formed within our bodies but are also derived from foods, endowing them with flavor. In the present study, we assessed the agonistic/antagonistic effects of food-derived AGE on RAGE signaling in a reporter assay system and found that low-molecular weight AGE can antagonize the action of AGE-BSA. Foods tested were Japanese soy sauce, coffee, cola, and red wine, all of which showed fluorescence characteristics of AGE. Soy sauce and coffee contained N(ε)-carboxymethyl-lysine (CML). Soy sauce, coffee, and red wine inhibited the RAGE ligand-induced activation of NF-κB, whereas cola had no effect on the ligand induction of NF-κB. The liquids were then fractionated into high-molecular weight (HMW) fractions and low-molecular weight (LMW) fractions. Soy sauce-, coffee-, and red wine-derived LMW fractions consistently inhibited the RAGE ligand induction of NF-κB, whereas the HMW fractions of these foods activated RAGE signaling. Using the LMW fraction of soy sauce as a model food-derived RAGE antagonist, we performed a plate-binding assay and found that the soy sauce LMW fractions competitively inhibited AGE-RAGE association. Further, this fraction significantly reduced AGE-dependent monocyte chemoattractant protein-1 (MCP-1) secretion from murine peritoneal macrophages. The LMF from soy sauce suppressed the AGE-induced RAGE trafficking to lipid rafts. These results indicate that small components in some, if not all, foods antagonize RAGE signaling and could exhibit beneficial effects on RAGE-related diseases.

  18. Recent progress of an integrated implosion code and modeling of element physics

    International Nuclear Information System (INIS)

    Nagatomo, H.; Takabe, H.; Mima, K.; Ohnishi, N.; Sunahara, A.; Takeda, T.; Nishihara, K.; Nishiguchu, A.; Sawada, K.

    2001-01-01

    Physics of the inertial fusion is based on a variety of elements such as compressible hydrodynamics, radiation transport, non-ideal equation of state, non-LTE atomic process, and relativistic laser plasma interaction. In addition, implosion process is not in stationary state and fluid dynamics, energy transport and instabilities should be solved simultaneously. In order to study such complex physics, an integrated implosion code including all physics important in the implosion process should be developed. The details of physics elements should be studied and the resultant numerical modeling should be installed in the integrated code so that the implosion can be simulated with available computer within realistic CPU time. Therefore, this task can be basically separated into two parts. One is to integrate all physics elements into a code, which is strongly related to the development of hydrodynamic equation solver. We have developed 2-D integrated implosion code which solves mass, momentum, electron energy, ion energy, equation of states, laser ray-trace, laser absorption radiation, surface tracing and so on. The reasonable results in simulating Rayleigh-Taylor instability and cylindrical implosion are obtained using this code. The other is code development on each element physics and verification of these codes. We had progress in developing a nonlocal electron transport code and 2 and 3 dimension radiation hydrodynamic code. (author)

  19. The receptor RAGE: Bridging inflammation and cancer

    Directory of Open Access Journals (Sweden)

    Hess Jochen

    2009-05-01

    Full Text Available Abstract The receptor for advanced glycation end products (RAGE is a single transmembrane receptor of the immunoglobulin superfamily that is mainly expressed on immune cells, neurons, activated endothelial and vascular smooth muscle cells, bone forming cells, and a variety of cancer cells. RAGE is a multifunctional receptor that binds a broad repertoire of ligands and mediates responses to cell damage and stress conditions. It activates programs responsible for acute and chronic inflammation, and is implicated in a number of pathological diseases, including diabetic complications, stroke, atheriosclerosis, arthritis, and neurodegenerative disorders. The availability of Rage knockout mice has not only advanced our knowledge on signalling pathways within these pathophysiological conditions, but also on the functional importance of the receptor in processes of cancer. Here, we will summarize molecular mechanisms through which RAGE signalling contributes to the establishment of a pro-tumourigenic microenvironment. Moreover, we will review recent findings that provide genetic evidence for an important role of RAGE in bridging inflammation and cancer.

  20. RAGE: a new frontier in chronic airways disease

    Science.gov (United States)

    Sukkar, Maria B; Ullah, Md Ashik; Gan, Wan Jun; Wark, Peter AB; Chung, Kian Fan; Hughes, J Margaret; Armour, Carol L; Phipps, Simon

    2012-01-01

    Asthma and chronic obstructive pulmonary disease (COPD) are heterogeneous inflammatory disorders of the respiratory tract characterized by airflow obstruction. It is now clear that the environmental factors that drive airway pathology in asthma and COPD, including allergens, viruses, ozone and cigarette smoke, activate innate immune receptors known as pattern-recognition receptors, either directly or indirectly by causing the release of endogenous ligands. Thus, there is now intense research activity focused around understanding the mechanisms by which pattern-recognition receptors sustain the airway inflammatory response, and how these mechanisms might be targeted therapeutically. One pattern-recognition receptor that has recently come to attention in chronic airways disease is the receptor for advanced glycation end products (RAGE). RAGE is a member of the immunoglobulin superfamily of cell surface receptors that recognizes pathogen- and host-derived endogenous ligands to initiate the immune response to tissue injury, infection and inflammation. Although the role of RAGE in lung physiology and pathophysiology is not well understood, recent genome-wide association studies have linked RAGE gene polymorphisms with airflow obstruction. In addition, accumulating data from animal and clinical investigations reveal increased expression of RAGE and its ligands, together with reduced expression of soluble RAGE, an endogenous inhibitor of RAGE signalling, in chronic airways disease. In this review, we discuss recent studies of the ligand–RAGE axis in asthma and COPD, highlight important areas for future research and discuss how this axis might potentially be harnessed for therapeutic benefit in these conditions. PMID:22506507

  1. RAGE: a new frontier in chronic airways disease.

    Science.gov (United States)

    Sukkar, Maria B; Ullah, Md Ashik; Gan, Wan Jun; Wark, Peter A B; Chung, Kian Fan; Hughes, J Margaret; Armour, Carol L; Phipps, Simon

    2012-11-01

    Asthma and chronic obstructive pulmonary disease (COPD) are heterogeneous inflammatory disorders of the respiratory tract characterized by airflow obstruction. It is now clear that the environmental factors that drive airway pathology in asthma and COPD, including allergens, viruses, ozone and cigarette smoke, activate innate immune receptors known as pattern-recognition receptors, either directly or indirectly by causing the release of endogenous ligands. Thus, there is now intense research activity focused around understanding the mechanisms by which pattern-recognition receptors sustain the airway inflammatory response, and how these mechanisms might be targeted therapeutically. One pattern-recognition receptor that has recently come to attention in chronic airways disease is the receptor for advanced glycation end products (RAGE). RAGE is a member of the immunoglobulin superfamily of cell surface receptors that recognizes pathogen- and host-derived endogenous ligands to initiate the immune response to tissue injury, infection and inflammation. Although the role of RAGE in lung physiology and pathophysiology is not well understood, recent genome-wide association studies have linked RAGE gene polymorphisms with airflow obstruction. In addition, accumulating data from animal and clinical investigations reveal increased expression of RAGE and its ligands, together with reduced expression of soluble RAGE, an endogenous inhibitor of RAGE signalling, in chronic airways disease. In this review, we discuss recent studies of the ligand-RAGE axis in asthma and COPD, highlight important areas for future research and discuss how this axis might potentially be harnessed for therapeutic benefit in these conditions. © 2012 The Authors. British Journal of Pharmacology © 2012 The British Pharmacological Society.

  2. Radiation-driven hydrodynamics of long pulse hohlraums on the National Ignition Facility

    International Nuclear Information System (INIS)

    Dewald, D L; Landen, O L; Suter, L J; Schein, J; Holder, J.; Campbell, K.; Glenzer, S H.; McDonald, J W.; Niemann, C.; Mackinnon, A J.; Schneider, M S.; Haynam, C.; Hinkel, D.; Hammel, B.A.

    2005-01-01

    The first hohlraum experiments on the National Ignition Facility (NIF) using the first four laser beams have activated the indirect drive experimental capabilities and tested radiation temperature limits imposed by hohlraum plasma filling. Vacuum hohlraums have been irradiated with laser powers up to 6 TW, 1 ns to 9 ns long square pulses and energies of up to 17 kJ to activate several diagnostics, to study the hohlraum radiation temperature scaling with the laser power and hohlraum size, and to make contact with hohlraum experiments performed at the NOVA and Omega laser facilities. Furthermore, for a variety of hohlraum sizes and pulse lengths, the measured x-ray flux shows signatures of plasma filling that coincide with hard x-ray emission from plasma streaming out of the hohlraum. These observations agree with hydrodynamic simulations and with analytical modeling that includes hydrodynamic and coronal radiative losses. The modeling predicts radiation temperature limits on full NIF (1.8 MJ) that are significantly greater than required for ignition hohlraums

  3. Incidence, clinical correlates and treatment effect of rage in anxious children.

    Science.gov (United States)

    Johnco, Carly; Salloum, Alison; De Nadai, Alessandro S; McBride, Nicole; Crawford, Erika A; Lewin, Adam B; Storch, Eric A

    2015-09-30

    Episodic rage represents an important and underappreciated clinical feature in pediatric anxiety. This study examined the incidence and clinical correlates of rage in children with anxiety disorders. Change in rage during treatment for anxiety was also examined. Participants consisted of 107 children diagnosed with an anxiety disorder and their parents. Participants completed structured clinical interviews and questionnaire measures to assess rage, anxiety, functional impairment, family accommodation and caregiver strain, as well as the quality of the child's relationship with family and peers. Rage was a common feature amongst children with anxiety disorders. Rage was associated with a more severe clinical profile, including increased anxiety severity, functional impairment, family accommodation and caregiver strain, as well as poorer relationships with parents, siblings, extended family and peers. Rage was more common in children with separation anxiety, comorbid anxiety, attention deficit/hyperactivity disorder and behavioral disorders, but not depressive symptoms. Rage predicted higher levels of functional impairment, beyond the effect of anxiety severity. Rage severity reduced over treatment in line with changes in anxiety symptoms. Findings suggest that rage is a marker of greater psychopathology in anxious youth. Standard cognitive behavioral treatment for anxiety appears to reduce rage without adjunctive treatment. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  4. Dissipation terms in one-dimensional hydrodynamic code for ICF target

    International Nuclear Information System (INIS)

    Tamba, Moritake; Niu, Keishiro.

    1985-01-01

    The one-dimensional hydrodynamic code so far used for the simulation of the target improsion in ICF, the artificial viscosity has been employed as the dissipation terms. This artificial viscosity depends on the mesh width of the space using in the simulation and is much large in comparison with the real viscosity. In this paper, it is shown that this artificial viscosity leads to the unreasonable fusion parameters depending on the used mesh width of the space. Several methods to modify the dissipation term are given in this paper. (author)

  5. RAGE and TLRs: relatives, friends or neighbours?

    Science.gov (United States)

    Ibrahim, Zaridatul Aini; Armour, Carol L; Phipps, Simon; Sukkar, Maria B

    2013-12-01

    The innate immune system forms the first line of protection against infectious and non-infectious tissue injury. Cells of the innate immune system detect pathogen-associated molecular patterns or endogenous molecules released as a result of tissue injury or inflammation through various innate immune receptors, collectively termed pattern-recognition receptors. Members of the Toll-like receptor (TLR) family of pattern-recognition receptors have well established roles in the host immune response to infection, while the receptor for advanced glycation end products (RAGE) is a pattern-recognition receptor predominantly involved in the recognition of endogenous molecules released in the context of infection, physiological stress or chronic inflammation. RAGE and TLRs share common ligands and signaling pathways, and accumulating evidence points towards their co-operative interaction in the host immune response. At present however, little is known about the mechanisms that result in TLR versus RAGE signalling or RAGE-TLR cross-talk in response to their shared ligands. Here we review what is known in relation to the physicochemical basis of ligand interactions between TLRs and RAGE, focusing on three shared ligands of these receptors: HMGB1, S100A8/A9 and LPS. Our aim is to discuss what is known about differential ligand interactions with RAGE and TLRs and to highlight important areas for further investigation so that we may better understand the role of these receptors and their relationship in host defense. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Code of practice for ionizing radiation

    International Nuclear Information System (INIS)

    Khoo Boo Huat

    1995-01-01

    Prior to 1984, the use of ionizing radiation in Malaysia was governed by the Radioactive Substances Act of 1968. After 1984, its use came under the control of Act 304, called the Atomic Energy Licensing Act 1984. Under powers vested by the Act, the Radiation Protection (Basic Safety Standards) Regulations 1988 were formulated to regulate its use. These Acts do not provide information on proper working procedures. With the publication of the codes of Practice by The Standards and Industrial Research Institute of Malaysia (SIRIM), the users are now able to follow proper guidelines and use ionizing radiation safely and beneficially. This paper discusses the relevant sections in the following codes: 1. Code of Practice for Radiation Protection (Medical X-ray Diagnosis) MS 838:1983. 2. Code of Practice for Safety in Laboratories Part 4: Ionizing radiation MS 1042: Part 4: 1992. (author)

  7. A Molecular Dynamics Study on RAGE-Aβ42 Interaction and the Influence of G82S RAGE Polymorphism on Aβ Interaction

    Directory of Open Access Journals (Sweden)

    Sreeram Krishnan

    2015-12-01

    Full Text Available Interaction of amyloid peptides (Aβ with receptor for advanced glycation end products (RAGE elicits an inflammatory response and augments Alzheimer's disease (AD pathology. The present study was aimed to analyse the interactions of different forms of Aβ42 peptide with ligand binding domain of normal and G82S RAGE and their possible consequences in AD pathology. The structures of RAGE ectodomain (3CJJ, monomeric forms of Aβ42 - 1IYT (apolar and 1Z0Q (polar and fibrillar (2BEG were obtained from PDB. The structure of G82 and S82 RAGE was generated using SWISS MODEL. SIFT and PolyPhen analysis was performed to predict the phenotypic and functional effect of the amino acid substitution. The G82 and S82 variant structures were simulated in GROMACS and the 10 lowest energy structures were docked with different forms of Aβ42 using CLUSPRO in antibody mode. The lowest energy docked structure was further simulated for 5 ns. The structures corresponding to 0-5 ns were taken and the amino acid interactions were generated using PDBSUM. SIFT analysis indicated that G82S SNP had a tolerating effect on the structure of protein but polyphen predicted a probable damaging effect. Highest binding score was obtained with 2BEG docked with both G82 RAGE (-375.84 ± 7.425 Kcal/mol and G82S variant (-391.09 ± 13.391 Kcal/mol indicating that the fibrillar form showed better interaction. Compared to G82 RAGE, the S82 variant showed better interaction to all three forms of Aβ42. The results of study indicate that RAGE interacted better with fibrillar form of Aβ42 peptide and G82S mutation enhanced the binding affinity of RAGE towards amyloid peptides leading to enhanced inflammatory response.

  8. Similarity solutions of time-dependent relativistic radiation-hydrodynamical plane-parallel flows

    Science.gov (United States)

    Fukue, Jun

    2018-04-01

    Similarity solutions are examined for the frequency-integrated relativistic radiation-hydrodynamical flows, which are described by the comoving quantities. The flows are vertical plane-parallel time-dependent ones with a gray opacity coefficient. For adequate boundary conditions, the flows are accelerated in a somewhat homologous manner, but terminate at some singular locus, which originates from the pathological behavior in relativistic radiation moment equations truncated in finite orders.

  9. Radiation hydrodynamical instabilities in cosmological and galactic ionization fronts

    Science.gov (United States)

    Whalen, Daniel J.; Norman, Michael L.

    2011-11-01

    Ionization fronts, the sharp radiation fronts behind which H/He ionizing photons from massive stars and galaxies propagate through space, were ubiquitous in the universe from its earliest times. The cosmic dark ages ended with the formation of the first primeval stars and galaxies a few hundred Myr after the Big Bang. Numerical simulations suggest that stars in this era were very massive, 25-500 solar masses, with H(II) regions of up to 30,000 light-years in diameter. We present three-dimensional radiation hydrodynamical calculations that reveal that the I-fronts of the first stars and galaxies were prone to violent instabilities, enhancing the escape of UV photons into the early intergalactic medium (IGM) and forming clumpy media in which supernovae later exploded. The enrichment of such clumps with metals by the first supernovae may have led to the prompt formation of a second generation of low-mass stars, profoundly transforming the nature of the first protogalaxies. Cosmological radiation hydrodynamics is unique because ionizing photons coupled strongly to both gas flows and primordial chemistry at early epochs, introducing a hierarchy of disparate characteristic timescales whose relative magnitudes can vary greatly throughout a given calculation. We describe the adaptive multistep integration scheme we have developed for the self-consistent transport of both cosmological and galactic ionization fronts.

  10. Observation of hydrodynamic processes of radiation-ablated plasma in a small hole

    Energy Technology Data Exchange (ETDEWEB)

    Li, Hang; Kuang, Longyu; Jiang, Shaoen, E-mail: jiangshn@vip.sina.com; Ding, Yongkun, E-mail: ding-yk@vip.sina.com [CAS Key Laboratory of Basic Plasma Physics and Department of Modern Physics, University of Science and Technology of China, Hefei 230026 (China); Research Center of Laser Fusion, China Academy of Engineering Physics, P.O. Box 919-986, Mianyang 621900 (China); Song, Tianming; Yang, Jiamin, E-mail: yjm70018@sina.cn; Zhu, Tuo; Lin, Zhiwei; Zheng, Jianhua; Zhang, Haiying; Yu, Ruizhen; Liu, Shenye [Research Center of Laser Fusion, China Academy of Engineering Physics, P.O. Box 919-986, Mianyang 621900 (China); Hu, Guangyue; Zhao, Bin; Zheng, Jian [CAS Key Laboratory of Basic Plasma Physics and Department of Modern Physics, University of Science and Technology of China, Hefei 230026 (China)

    2015-07-15

    In the hohlraum used in laser indirect-drive inertial confinement fusion experiments, hydrodynamic processes of radiation-ablated high-Z plasma have a great effect on laser injection efficiency, radiation uniformity, and diagnosis of hohlraum radiation field from diagnostic windows (DW). To study plasma filling in the DWs, a laser-irradiated Ti disk was used to generate 2–5 keV narrow energy band X-ray as the intense backlighter source, and laser-produced X-ray in a hohlraum with low-Z foam tamper was used to heat a small hole surrounded by gold wall with 150 μm in diameter and 100 μm deep. The hydrodynamic movement of the gold plasma in the small hole was measured by an X-ray framing camera and the results are analyzed. Quantitative measurement of the plasma areal density distribution and evolution in the small hole can be used to assess the effect of plasma filling on the diagnosis from the DWs.

  11. The flying radiation case

    International Nuclear Information System (INIS)

    Brownell, J.H.; Bowers, R.L.

    1997-01-01

    The Los Alamos foil implosion program has the goal of producing an intense, high-energy density x-ray source by converting the energy of a magnetically imploded plasma into radiation and material energy. One of the methods for converting the plasma energy into thermal energy and radiation and utilizing it for experiments is called the flying radiation case (FRC). In this paper the authors shall model the FRC and provide a physical description of the processes involved. An analytic model of a planar FRC in the hydrodynamic approximation is used to describe the assembly and shock heating of a central cushion by a conducting liner driver. The results are also used to benchmark a hydrodynamics code for modeling an FRC. They then use a radiation-hydrodynamics computational model to explore the effects of radiation production and transport when a gold plasma assembles on a CH cushion. Results are presented for the structure and evolution of the radiation hohlraum

  12. Discovering Small Molecule Inhibitors Targeted to Ligand-Stimulated RAGE-DIAPH1 Signaling Transduction

    Science.gov (United States)

    Pan, Jinhong

    The receptor of advanced glycation end product (RAGE) is a multiligand receptor of the immunoglobulin superfamily of cell surface molecules, which plays an important role in immune responses. Full-length RAGE includes three extracellular immunoglobulin domains, a transmembrane domain and an intracellular domain. It is a pattern recognition receptor that can bind diverse ligands. NMR spectroscopy and x-ray crystallization studies of the extracellular domains of RAGE indicate that RAGE ligands bind by distinct charge- and hydrophobicity-dependent mechanisms. It is found that calgranulin binding to the C1C2 domain or AGEs binding to the V domain activates extracellular signaling, which triggers interactions of the RAGE cytoplasmic tail (ctRAGE) with intracellular effector, such as diaphanous 1 (DIAPH1), to initiate signal transduction cascades. ctRAGE is essential for RAGE-ligand-mediated signal transduction and consequent modulation of gene expression and cellular properties. RAGE is over-expressed in diseased tissues of most RAGE-associated pathogenic conditions, such as complications of Alzheimer's diseases, diabetes, vascular diseases, inflammation, cancers and neurodegeneration. They are the major diseases affecting a large population worldwide. RAGE can function as a biomarker or drug target for these diseases. The cytoplasmic tail of RAGE can be used as a drug target to inhibit RAGE-induced intracellular signaling by small molecule inhibitors to treat RAGE-associated diseases. We developed a high throughput screening assay with which we probed a small molecule library of 58,000 compounds to find that 777 small molecules displayed 50% inhibition and 97 compounds demonstrated dose-dependent inhibition of the binding of ctRAGE-DIAPH1. Eventually, there were 13 compounds which displayed dose-dependent inhibition of ctRAGE binding to DIAPH1 and direct binding to ctRAGE analyzed by 15N HSQC-NMR and native tryptophan fluorescence titration experiments; thus, they were

  13. Adaptation of radiation shielding code to space environment

    International Nuclear Information System (INIS)

    Okuno, Koichi; Hara, Akihisa

    1992-01-01

    Recently, the trend to the development of space has heightened. To the development of space, many problems are related, and as one of them, there is the protection from cosmic ray. The cosmic ray is the radiation having ultrahigh energy, and there was not the radiation shielding design code that copes with cosmic ray so far. Therefore, the high energy radiation shielding design code for accelerators was improved so as to cope with the peculiarity that cosmic ray possesses. Moreover, the calculation of the radiation dose equivalent rate in the moon base to which the countermeasures against cosmic ray were taken was simulated by using the improved code. As the important countermeasures for the safety protection from radiation, the covering with regolith is carried out, and the effect of regolith was confirmed by using the improved code. Galactic cosmic ray, solar flare particles, radiation belt, the adaptation of the radiation shielding code HERMES to space environment, the improvement of the three-dimensional hadron cascade code HETCKFA-2 and the electromagnetic cascade code EGS 4-KFA, and the cosmic ray simulation are reported. (K.I.)

  14. High-fidelity plasma codes for burn physics

    Energy Technology Data Exchange (ETDEWEB)

    Cooley, James [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Graziani, Frank [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Marinak, Marty [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Murillo, Michael [Michigan State Univ., East Lansing, MI (United States)

    2016-10-19

    Accurate predictions of equation of state (EOS), ionic and electronic transport properties are of critical importance for high-energy-density plasma science. Transport coefficients inform radiation-hydrodynamic codes and impact diagnostic interpretation, which in turn impacts our understanding of the development of instabilities, the overall energy balance of burning plasmas, and the efficacy of self-heating from charged-particle stopping. Important processes include thermal and electrical conduction, electron-ion coupling, inter-diffusion, ion viscosity, and charged particle stopping. However, uncertainties in these coefficients are not well established. Fundamental plasma science codes, also called high-fidelity plasma codes, are a relatively recent computational tool that augments both experimental data and theoretical foundations of transport coefficients. This paper addresses the current status of HFPC codes and their future development, and the potential impact they play in improving the predictive capability of the multi-physics hydrodynamic codes used in HED design.

  15. Acute secondhand smoke-induced pulmonary inflammation is diminished in RAGE knockout mice.

    Science.gov (United States)

    Wood, Tyler T; Winden, Duane R; Marlor, Derek R; Wright, Alex J; Jones, Cameron M; Chavarria, Michael; Rogers, Geraldine D; Reynolds, Paul R

    2014-11-15

    The receptor for advanced glycation end-products (RAGE) has increasingly been demonstrated to be an important modulator of inflammation in cases of pulmonary disease. Published reports involving tobacco smoke exposure have demonstrated increased expression of RAGE, its participation in proinflammatory signaling, and its role in irreversible pulmonary remodeling. The current research evaluated the in vivo effects of short-term secondhand smoke (SHS) exposure in RAGE knockout and control mice compared with identical animals exposed to room air only. Quantitative PCR, immunoblotting, and immunohistochemistry revealed elevated RAGE expression in controls after 4 wk of SHS exposure and an anticipated absence of RAGE expression in RAGE knockout mice regardless of smoke exposure. Ras activation, NF-κB activity, and cytokine elaboration were assessed to characterize the molecular basis of SHS-induced inflammation in the mouse lung. Furthermore, bronchoalveolar lavage fluid was procured from RAGE knockout and control animals for the assessment of inflammatory cells and molecules. As a general theme, inflammation coincident with leukocyte recruitment was induced by SHS exposure and significantly influenced by the availability of RAGE. These data reveal captivating information suggesting a role for RAGE signaling in lungs exposed to SHS. However, ongoing research is still warranted to fully explain roles for RAGE and other receptors in cells coping with involuntary smoke exposure for prolonged periods of time. Copyright © 2014 the American Physiological Society.

  16. Local and systemic RAGE axis changes in pulmonary hypertension: CTEPH and iPAH.

    Directory of Open Access Journals (Sweden)

    Bernhard Moser

    Full Text Available OBJECTIVE: The molecular determinants of chronic thromboembolic pulmonary hypertension (CTEPH and idiopathic pulmonary arterial hypertension (iPAH remain poorly understood. The receptor for advanced glycation endproducts (RAGE and its ligands: HMGB1 and S100A9 are involved in inflammatory disorders. We sought to investigate the role of the RAGE axis in patients with CTEPH undergoing pulmonary endarterectomy (PEA, iPAH undergoing lung transplantation (LuTX. The high pulmonary vascular resistance in CTEPH/iPAH results in pressure overload of the right ventricle. We compared sRAGE measurements to that of patients with aortic valve stenosis (AVS - pressure overload of the left ventricle. METHODS: We enrolled patients with CTEPH(26, iPAH(15, AVS(15 and volunteers(33. Immunohistochemistry with antibodies to RAGE and HMGB1 was performed on PEA specimens and lung tissues. We employed enzyme-linked immunosorbent assays to determine the concentrations of sRAGE, esRAGE, HMGB1 and S100A9 in serum of volunteers and patients with CTEPH, iPAH, AVS before and after PEA, LuTX and aortic valve replacement (AVR. RESULTS: In endarterectomised tissues from patients with CTEPH RAGE and HMGB1 were identified in myofibroblasts (α-SMA+vimentin+CD34-, recanalizing vessel-like structures of distal myofibrotic tissues and endothelium of neointima. RAGE was differentially expressed in prototypical Heath Edwards lesions in iPAH. We found significantly increased serum concentrations of sRAGE, esRAGE and HMGB1 in CTEPH. In iPAH, sRAGE and esRAGE were significantly higher than in controls. Serum concentrations of sRAGE were significantly elevated in iPAH(p<0.001 and CTEPH(p = 0.001 compared to AVS. Serum sRAGE was significantly higher in iPAH compared to CTEPH(p = 0.042 and significantly reduced in AVS compared to controls(p = 0.001. There were no significant differences in sRAGE serum concentrations before and after surgical therapy for CTEPH, iPAH or AVS. CONCLUSIONS: Our

  17. Radiation transport phenomena and modeling - part A: Codes

    International Nuclear Information System (INIS)

    Lorence, L.J.

    1997-01-01

    The need to understand how particle radiation (high-energy photons and electrons) from a variety of sources affects materials and electronics has motivated the development of sophisticated computer codes that describe how radiation with energies from 1.0 keV to 100.0 GeV propagates through matter. Predicting radiation transport is the necessary first step in predicting radiation effects. The radiation transport codes that are described here are general-purpose codes capable of analyzing a variety of radiation environments including those produced by nuclear weapons (x-rays, gamma rays, and neutrons), by sources in space (electrons and ions) and by accelerators (x-rays, gamma rays, and electrons). Applications of these codes include the study of radiation effects on electronics, nuclear medicine (imaging and cancer treatment), and industrial processes (food disinfestation, waste sterilization, manufacturing.) The primary focus will be on coupled electron-photon transport codes, with some brief discussion of proton transport. These codes model a radiation cascade in which electrons produce photons and vice versa. This coupling between particles of different types is important for radiation effects. For instance, in an x-ray environment, electrons are produced that drive the response in electronics. In an electron environment, dose due to bremsstrahlung photons can be significant once the source electrons have been stopped

  18. DIAPHANE: A portable radiation transport library for astrophysical applications

    Science.gov (United States)

    Reed, Darren S.; Dykes, Tim; Cabezón, Rubén; Gheller, Claudio; Mayer, Lucio

    2018-05-01

    One of the most computationally demanding aspects of the hydrodynamical modelingof Astrophysical phenomena is the transport of energy by radiation or relativistic particles. Physical processes involving energy transport are ubiquitous and of capital importance in many scenarios ranging from planet formation to cosmic structure evolution, including explosive events like core collapse supernova or gamma-ray bursts. Moreover, the ability to model and hence understand these processes has often been limited by the approximations and incompleteness in the treatment of radiation and relativistic particles. The DIAPHANE project has focused on developing a portable and scalable library that handles the transport of radiation and particles (in particular neutrinos) independently of the underlying hydrodynamic code. In this work, we present the computational framework and the functionalities of the first version of the DIAPHANE library, which has been successfully ported to three different smoothed-particle hydrodynamic codes, GADGET2, GASOLINE and SPHYNX. We also present validation of different modules solving the equations of radiation and neutrino transport using different numerical schemes.

  19. Code of practice against radiation hazards at PINSTECH

    International Nuclear Information System (INIS)

    Mubarak, M.A.; Javed, M.; Ahmad, S.

    1982-10-01

    It is the radiation safety policy of PAEC/PINSTECH that all radiation exposure should be kept as low as reasonably achievable (ALARA). A code of practice against radiation hazards at PINSTECH was written in 1972 which regulated the conduct of radiation work at PINSTECH. Since the radiation work at PINSTECH has greatly increased, it was considered necessary to revise the code so as to incorporate the new concepts in this field as well as to help meet the present requirements of radiation protection. The procedures set forth in this code are mandatory and in no case should any of them be deviated except under an emergency situation which may be handled according to procedures laid down in a separate manual ''Emergency Procedures at PARR-PINSTECH'' (PINSTECH/HP--19). All those supervising or performing any kind of radiation work are required to study and adhere to these procedures. Copy of this code should be kept in every radiation laboratory for ready reference. (author)

  20. Hydrodynamic Expansion of Pellicles Caused by e-Beam Heating

    CERN Document Server

    Ho, D

    2000-01-01

    Placing a pellicle in front of a x-ray converter target for radiographic applications can confine the backstreaming ions and target plasma to a shorter channel so that the cumulative effect on e-beam focusing is reduced. The pellicle is subject to heating by e-beam since the pellicle is placed upstream of the target. The calculation of the hydrodynamic expansion, caused by the heating, using the radiation hydrodynamics code LASNEX is presented in this report. Calculations show that mylar pellicles disintegrate at the end of a multi-pulse intense e-beam while beryllium and carbon pellicles remain intact. The expansions for the kapton-carbon multi-layered targets are also examined. Hydrodynamic expansions for pellicles with various e-beam spot radii are calculated for DARHT-II beam parameters. All the simulation results indicate that the backstreaming ions can be stopped.

  1. Radiation dependent ionization model

    International Nuclear Information System (INIS)

    Busquet, M.

    1991-01-01

    For laser created plasma simulation, hydrodynamics codes need a non-LTE atomic physics package for both EOS and optical properties (emissivity and opacity). However in XRL targets as in some ICF targets, high Z material can be found. In these cases radiation trapping can induce a significant departure from the optically thin ionization description. The authors present a method to change an existing LTE code into a non-LTE code with coupling of ionization to radiation. This method has very low CPU cost and can be used in 2D simulations

  2. Total soluble and endogenous secretory receptor for advanced glycation endproducts (RAGE) in IBD.

    Science.gov (United States)

    Meijer, Berrie; Hoskin, Teagan; Ashcroft, Anna; Burgess, Laura; Keenan, Jacqueline I; Falvey, James; Gearry, Richard B; Day, Andrew S

    2014-06-01

    Recruitment and activation of neutrophils, with release of specific proteins such as S100 proteins, is a feature of inflammatory bowel disease (IBD). Soluble forms of the receptor for advanced glycation endproducts (sRAGE), and variants such as endogenous secretory (esRAGE), can act as decoy receptors by binding ligands, including S100A12. The aims of this study were to determine total sRAGE and esRAGE concentrations in patients with IBD and correlate these with C-reactive protein (CRP), endoscopic scores and clinical disease activity scores. EDTA-plasma was collected from patients undergoing colonoscopy including those with Crohn's disease (CD: n=125), ulcerative colitis (UC: n=79) and control patients without endoscopic signs of inflammation (non-IBD: n=156). Concentrations of sRAGE and esRAGE were determined by enzyme-linked immunosorbent assay and plasma CRP concentrations measured. Standard clinical disease activity and endoscopic severity scores were defined for all subjects. Plasma sRAGE concentrations were lower in UC (but not CD) than non-IBD subjects (pdefine the significance of sRAGE and esRAGE in IBD. Copyright © 2013 European Crohn's and Colitis Organisation. Published by Elsevier B.V. All rights reserved.

  3. The association between the RAGE G82S polymorphism, sRAGE and chronic periodontitis in Taiwanese individuals with and without diabetes.

    Science.gov (United States)

    Wu, T-L; Tsai, C-C; Wang, Y-Y; Ho, K-Y; Wu, Y-M; Hung, H-C; Lin, Y-C

    2015-12-01

    The present study investigated the association between the RAGE G82S polymorphism, the plasma levels of sRAGE and chronic periodontitis in subjects with and without diabetes mellitus (DM). A total of 230 patients with DM and 264 non-DM participants were recruited for this study. Genotyping of the RAGE G82S polymorphism was accomplished using polymerase chain reaction-restriction fragment length polymorphism, and associations were analyzed with the chi-squared test and logistic regression analysis. In the non-DM group, the chi-squared test showed that the frequency distributions of the G82S polymorphism were significantly different between chronic periodontitis and non-chronic periodontitis subjects (χ(2) = 8.39, p = 0.02). A multivariate logistic regression model showed that the (G82S + S82S) genotypes were associated with a significantly increased risk of chronic periodontitis development compared to the G82G genotype (adjusted odds ratio = 2.06, 95% confidence interval: 1.08-4.07). In the DM group, there was no association between the G82S polymorphism and chronic periodontitis development when a multivariate logistic regression was performed. Plasma levels of sRAGE were significantly higher in subjects with the G82G genotype compared to those with the (G82S + S82S) genotypes in both the non-DM (856.6 ± 332.0 vs. 720.4 ± 311.4 pg/mL, p = 0.003) and DM groups (915.3 ± 497.1 vs. 603.5 ± 298.3 pg/mL, p chronic periodontitis and non-chronic periodontitis subjects in both the DM and non-DM groups. Moreover, when the subjects were further sub-divided by the G82S polymorphism, the difference in plasma levels of sRAGE between chronic periodontitis and non-chronic periodontitis subjects in the DM and non-DM groups remained statistically insignificant. The present study revealed that the RAGE G82S polymorphism was associated with chronic periodontitis in the non-DM group but not in the DM group. Our results also showed that the plasma levels of sRAGE were

  4. Development of fast ignition integrated interconnecting code (FI3) for fast ignition scheme

    International Nuclear Information System (INIS)

    Nagatomo, H.; Johzaki, T.; Mima, K.; Sunahara, A.; Nishihara, K.; Izawa, Y.; Sakagami, H.; Nakao, Y.; Yokota, T.; Taguchi, T.

    2005-01-01

    The numerical simulation plays an important role in estimating the feasibility and performance of the fast ignition. There are two key issues in numerical analysis for the fast ignition. One is the controlling the implosion dynamics to form a high density core plasma in non-spherical implosion, and the other is heating core plasma efficiency by the short pulse high intense laser. From initial laser irradiation to final fusion burning, all the physics are coupling strongly in any phase, and they must be solved consistently in computational simulation. However, in general, it is impossible to simulate laser plasma interaction and radiation hydrodynamics in a single computational code, without any numerical dissipation, special assumption or conditional treatment. Recently, we have developed 'Fast Ignition Integrated Interconnecting code' (FI 3 ) which consists of collective Particle-in-Cell code, Relativistic Fokker-Planck hydro code, and 2-dimensional radiation hydrodynamics code. And those codes are connecting with each other in data-flow bases. In this paper, we will present detail feature of the FI 3 code, and numerical results of whole process of fast ignition. (author)

  5. Structure function relationship of recombinant sRAGE

    OpenAIRE

    Premaratne, Dinamithra Gedara Sujeewani Rasika

    2017-01-01

    The receptor for advanced glycation end-products (RAGE) is a member of the immunoglobulin super family of cell surface receptors. It acts as the direct mediator of physiological and pathological responses such as inflammation, chemotaxis, neurite outgrowth, angiogenesis, apoptosis and proliferation. RAGE is known to bind with structurally and functionally diverse ligands, such as advanced glycation end-products (AGEs), high mobility group family proteins including HMGB-1/amphoterin, matrix pr...

  6. StarSmasher: Smoothed Particle Hydrodynamics code for smashing stars and planets

    Science.gov (United States)

    Gaburov, Evghenii; Lombardi, James C., Jr.; Portegies Zwart, Simon; Rasio, F. A.

    2018-05-01

    Smoothed Particle Hydrodynamics (SPH) is a Lagrangian particle method that approximates a continuous fluid as discrete nodes, each carrying various parameters such as mass, position, velocity, pressure, and temperature. In an SPH simulation the resolution scales with the particle density; StarSmasher is able to handle both equal-mass and equal number-density particle models. StarSmasher solves for hydro forces by calculating the pressure for each particle as a function of the particle's properties - density, internal energy, and internal properties (e.g. temperature and mean molecular weight). The code implements variational equations of motion and libraries to calculate the gravitational forces between particles using direct summation on NVIDIA graphics cards. Using a direct summation instead of a tree-based algorithm for gravity increases the accuracy of the gravity calculations at the cost of speed. The code uses a cubic spline for the smoothing kernel and an artificial viscosity prescription coupled with a Balsara Switch to prevent unphysical interparticle penetration. The code also implements an artificial relaxation force to the equations of motion to add a drag term to the calculated accelerations during relaxation integrations. Initially called StarCrash, StarSmasher was developed originally by Rasio.

  7. MR imaging in epilepsy with use of 3D MP-RAGE

    International Nuclear Information System (INIS)

    Tanaka, Akio; Ohno, Sigeru; Sei, Tetsuro; Kanazawa, Susumu; Yasui, Koutaro; Kuroda, Masahiro; Hiraki, Yoshio; Oka, Eiji

    1996-01-01

    The patients were 40 males and 33 females; their ages ranged from 1 month to 39 years (mean: 15.7 years). The patients underwent MR imaging, including spin-echo T 1 -weighted, turbo spin-echo proton density/T 2 -weighted, and 3D magnetization-prepared rapid gradient-echo (3D MP-RAGE) images. These examinations disclosed 39 focal abnormalities. On visual evaluation, the boundary of abnormal gray matter in the neuronal migration disorder (NMD) cases was most clealy shown on 3D MP-RAGE images as compared to the other images. This is considered to be due to the higher spatial resolution and the better contrast of the 3D MP-RAGE images than those of the other techniques. The relative contrast difference between abnormal gray matter and the adjacent white matter was also assessed. The results revealed that the contrast differences on the 3D MP-RAGE images were larger than those on the other images; this was statistically significant. Although the sensitivity of 3D MP-RAGE for NMD was not specifically evaluated in this study, the possibility of this disorder, in cases suspected on other images, could be ruled out. Thus, it appears that the specificity with respect to NMD was at least increased with us of 3D MP-RAGE. 3D MP-RAGE also enabled us to build three-dimensional surface models that were helpful in understanding the three-dimensional anatomy. Furthermore. 3D MP-RAGE was considered to be the best technique for evaluating hippocampus atrophy in patients with MTS. On the other hand, the sensitivity in the signal change of the hippocampus was higher on T 2 -weighted images. In addition, demonstration of cortical tubers of tuberous sclerosis in neurocutaneous syndrome was superior on T 2 -weighted images than on 3D MP-RAGE images. (K.H.)

  8. Calculation codes in radiation protection, radiation physics and dosimetry

    International Nuclear Information System (INIS)

    2003-01-01

    These scientific days had for objective to draw up the situation of calculation codes of radiation transport, of sources estimation, of radiation doses managements and to draw the future perspectives. (N.C.)

  9. Revealing the Physics of Galactic Winds Through Massively-Parallel Hydrodynamics Simulations

    Science.gov (United States)

    Schneider, Evan Elizabeth

    This thesis documents the hydrodynamics code Cholla and a numerical study of multiphase galactic winds. Cholla is a massively-parallel, GPU-based code designed for astrophysical simulations that is freely available to the astrophysics community. A static-mesh Eulerian code, Cholla is ideally suited to carrying out massive simulations (> 20483 cells) that require very high resolution. The code incorporates state-of-the-art hydrodynamics algorithms including third-order spatial reconstruction, exact and linearized Riemann solvers, and unsplit integration algorithms that account for transverse fluxes on multidimensional grids. Operator-split radiative cooling and a dual-energy formalism for high mach number flows are also included. An extensive test suite demonstrates Cholla's superior ability to model shocks and discontinuities, while the GPU-native design makes the code extremely computationally efficient - speeds of 5-10 million cell updates per GPU-second are typical on current hardware for 3D simulations with all of the aforementioned physics. The latter half of this work comprises a comprehensive study of the mixing between a hot, supernova-driven wind and cooler clouds representative of those observed in multiphase galactic winds. Both adiabatic and radiatively-cooling clouds are investigated. The analytic theory of cloud-crushing is applied to the problem, and adiabatic turbulent clouds are found to be mixed with the hot wind on similar timescales as the classic spherical case (4-5 t cc) with an appropriate rescaling of the cloud-crushing time. Radiatively cooling clouds survive considerably longer, and the differences in evolution between turbulent and spherical clouds cannot be reconciled with a simple rescaling. The rapid incorporation of low-density material into the hot wind implies efficient mass-loading of hot phases of galactic winds. At the same time, the extreme compression of high-density cloud material leads to long-lived but slow-moving clumps

  10. PLASMOR: A laser-plasma simulation code. Pt. 2

    International Nuclear Information System (INIS)

    Salzman, D.; Krumbein, A.D.; Szichman, H.

    1987-06-01

    This report supplements a previous one which describes the PLASMOR hydrodynamics code. The present report documents the recent changes and additions made in the code. In particular described are two new subroutines for radiative preheat, a system of preprocessors which prepare the code before run, a list of postprocessors which simulate experimental setups, and the basic data sets required to run PLASMOR. In the Appendix a new computer-based manual which lists the main features of PLASMOR is reproduced

  11. RAGE receptor and its soluble isoforms in diabetes mellitus complications

    Directory of Open Access Journals (Sweden)

    Mauren Isfer Anghebem Oliveira

    2013-04-01

    Full Text Available Chronic hyperglycemia, which is present in all types of diabetes, increases the formation of advanced glycation end-products (AGEs. The interaction of AGEs with receptor of advanced glycation end-products (RAGE initiates a cascade of pro-inflammatory and pro-coagulant processes that result in oxidative stress, stimulating the formation and accumulation of more AGE molecules. This cyclic process, denominated metabolic memory, may explain the persistency of diabetic vascular complications in patients with satisfactory glycemic control. The RAGE found in several cell membranes is also present in soluble isoforms (esRAGE and cRAGE, which are generated by alternative deoxyribonucleic acid splicing or by proteolytic cleavage. This review focuses on new research into these mediators as potential biomarkers for vascular complications in diabetes.

  12. Simulations of radiative shocks and jet formation in laboratory plasmas

    Energy Technology Data Exchange (ETDEWEB)

    Velarde, P; Gonzalez, M; GarcIa-Fernandez, C; Oliva, E [Instituto de Fusion Nuclear, Universidad Politcnica de Madrid, Madrid (Spain) (Spain); Kasperczuk, A; Pisarczyk, T [Institute of Plasma Physics and Laser Microfusion, Warsaw (Poland) (Poland); Ullschmied, J [Institute of Plasma Physics AS CR, Prague (Czech Republic) (Czech Republic); Stehle, C [LERMA, Observatoire de Paris, Meudon (France) (France); Rus, B [Institute of Physics, PALS Center, Prague (Czech Republic) (Czech Republic); GarcIa-Senz, D; Bravo, E; Relano, A [Departament de Fisica i Enginyeria Nuclear. Universitat Politecnica de Catalunya. Barcelona (Spain) (Spain)], E-mail: velarde@din.upm.es

    2008-05-01

    We present the simulations of two relevant hydrodynamical problems related to astrophysical phenomena performed by three different codes. The numerical results from these codes will be compared in order to test both the numerical method implemented inside them and the influence of the physical phenomena simulated by the codes. Under some conditions laser produced plasmas could be scaled to the typical conditions prevailing in astrophysical plasmas. Therefore, such similarity allows to use existing laser facilities and numerical codes suitable to a laser plasma regime, for studying astrophysical proccesses. The codes are the radiation fluid dynamic 2D ARWEN code and the 3D HERACLES, and, without radiation energy transport, a Smoothed-Particle Hydrodynamics (SPH) code. These codes use different numerical techniques and have overlapping range of application, from laser produced plasmas to astrophysical plasmas. We also present the first laser experiments obtaining cumulative jets with a velocity higher than 100 km/s.

  13. Code of practice for safety in laboratory - non ionising radiation

    International Nuclear Information System (INIS)

    Ramli Jaya; Mohd Yusof Mohd Ali; Khoo Boo Huat; Khatijah Hashim

    1995-01-01

    The code identifies the non-ionizing radiation encountered in laboratories and the associated hazards. The code is intended as a laboratory standard reference document for general information on safety requirements relating to the usage of non-ionizing radiations in laboratories. The nonionizing radiations cover in this code, namely, are ultraviolet radiation, visible light, radio-frequency radiation, lasers, sound waves and ultrasonic radiation. (author)

  14. AGN Obscuration Through Dusty Infrared Dominated Flows. II. Multidimensional, Radiation-Hydrodynamics Modeling

    Science.gov (United States)

    Dorodnitsyn, Anton; Kallman, Tim; Bisno\\vatyiI-Kogan, Gennadyi

    2011-01-01

    We explore a detailed model in which the active galactic nucleus (AGN) obscuration results from the extinction of AGN radiation in a global ow driven by the pressure of infrared radiation on dust grains. We assume that external illumination by UV and soft X-rays of the dusty gas located at approximately 1pc away from the supermassive black hole is followed by a conversion of such radiation into IR. Using 2.5D, time-dependent radiation hydrodynamics simulations in a ux-limited di usion approximation we nd that the external illumination can support a geometrically thick obscuration via out ows driven by infrared radiation pressure in AGN with luminosities greater than 0:05 L(sub edd) and Compton optical depth, Tau(sub T) approx > & 1.

  15. Decreased Neointimal Extracellular Matrix Formation in RAGE-Knockout Mice After Microvascular Denudation

    Energy Technology Data Exchange (ETDEWEB)

    Groezinger, Gerd, E-mail: gerd.groezinger@med.uni-tuebingen.de; Schmehl, Joerg, E-mail: joerg.schmehl@med.uni-tuebingen.de; Bantleon, Ruediger, E-mail: ruediger.bantleon@med.uni-tuebingen.de; Kehlbach, Rainer, E-mail: rainer.kehlbach@uni-tuebingen.de [University of Tuebingen, Department of Diagnostic and Interventional Radiology (Germany); Mehra, Tarun, E-mail: tarun.mehra@med.uni-tuebingen.de [University of Tuebingen, Department of Dermatology (Germany); Claussen, Claus, E-mail: gerd.groezinger@med.uni-tuebingen.de; Wiesinger, Benjamin, E-mail: benjamin.wiesinger@med.uni-tuebingen.de [University of Tuebingen, Department of Diagnostic and Interventional Radiology (Germany)

    2012-12-15

    Purpose: To evaluate in vivo the role of RAGE (receptor for advanced glycated end products) in the development of restenosis and neointimal proliferation in RAGE-deficient knockout (KO) mice compared with wild-type (WT) mice in an animal model. Materials and Methods: Sixteen WT and 15 RAGE-deficient mice underwent microvascular denudation of the common femoral artery under general anaesthesia. Contralateral arteries underwent a sham operation and served as controls. Four weeks after the intervention, all animals were killed, and paraformaldehyde-fixed specimens of the femoral artery were analysed with different stains (hematoxylin and eosin and Elastica van Gieson) and several different types of immunostaining (proliferating cell nuclear antigen, {alpha}-actin, collagen, von Willebrand factor, RAGE). Luminal area, area of the neointima, and area of the media were measured in all specimens. In addition, colony-formation assays were performed, and collagen production by WT smooth muscle cells (SMCs) and RAGE-KO SMCs was determined. For statistical analysis, P < 0.05 was considered statistically significant. Results: Four weeks after denudation, WT mice showed a 49.6% loss of luminal area compared with 14.9% loss of luminal area in RAGE-deficient mice (sham = 0% loss) (P < 0.001). The neointima was 18.2 (*1000 {mu}m{sup 2} [n = 15) in the WT group compared with only 8.4 (*1000 {mu}m{sup 2} [n = 16]) in the RAGE-KO group. RAGE-KO SMCs showed significantly decreased proliferation activity and production of extracellular matrix protein. Conclusion: RAGE may be shown to play a considerable role in the formation of neointima leading to restenosis after vascular injury.

  16. Decreased levels of sRAGE in follicular fluid from patients with PCOS.

    Science.gov (United States)

    Wang, BiJun; Li, Jing; Yang, QingLing; Zhang, FuLi; Hao, MengMeng; Guo, YiHong

    2017-03-01

    This study aimed to explore the association between soluble receptor for advanced glycation end products (sRAGE) levels in follicular fluid and the number of oocytes retrieved and to evaluate the effect of sRAGE on vascular endothelial growth factor (VEGF) in granulosa cells in patients with polycystic ovarian syndrome (PCOS). Two sets of experiments were performed in this study. In part one, sRAGE and VEGF protein levels in follicular fluid samples from 39 patients with PCOS and 35 non-PCOS patients were measured by ELISA. In part two, ovarian granulosa cells were isolated from an additional 10 patients with PCOS and cultured. VEGF and SP1 mRNA and protein levels, as well as pAKT levels, were detected by real-time PCR and Western blotting after cultured cells were treated with different concentrations of sRAGE. Compared with the non-PCOS patients, patients with PCOS had lower sRAGE levels in follicular fluid. Multi-adjusted regression analysis showed that high sRAGE levels in follicular fluid predicted a lower Gn dose, more oocytes retrieved, and a better IVF outcome in the non-PCOS group. Logistic regression analysis showed that higher sRAGE levels predicted favorably IVF outcomes in the non-PCOS group. Multi-adjusted regression analysis also showed that high sRAGE levels in follicular fluid predicted a lower Gn dose in the PCOS group. Treating granulosa cells isolated from patients with PCOS with recombinant sRAGE decreased VEGF and SP1 mRNA and protein expression and pAKT levels in a dose-dependent manner. © 2017 Society for Reproduction and Fertility.

  17. In vitro anticancer effects of a RAGE inhibitor discovered using a structure-based drug design system

    Science.gov (United States)

    El-Far, Ali Hafez Ali Mohammed; Munesue, Seiichi; Harashima, Ai; Sato, Akira; Shindo, Mika; Nakajima, Shingo; Inada, Mana; Tanaka, Mariko; Takeuchi, Akihiko; Tsuchiya, Hiroyuki; Yamamoto, Hiroshi; Shaheen, Hazem M.E.; El-Sayed, Yasser S.; Kawano, Shuhei; Tanuma, Sei-Ichi; Yamamoto, Yasuhiko

    2018-01-01

    Receptor for advanced glycation end-products (RAGE) is a pattern recognition receptor implicated in the pathogenesis of certain types of cancer. In the present study, papaverine was identified as a RAGE inhibitor using the conversion to small molecules through optimized-peptide strategy drug design system. Papaverine significantly inhibited RAGE-dependent nuclear factor κ-B activation driven by high mobility group box-1, a RAGE ligand. Using RAGE- or dominant-negative RAGE-expressing HT1080 human fibrosarcoma cells, the present study revealed that papaverine suppressed RAGE-dependent cell proliferation and migration dose-dependently. Furthermore, papaverine significantly inhibited cell invasion. The results of the present study suggested that papaverine could inhibit RAGE, and provided novel insights into the field of RAGE biology, particularly anticancer therapies. PMID:29541234

  18. The COBAIN (COntact Binary Atmospheres with INterpolation) Code for Radiative Transfer

    Science.gov (United States)

    Kochoska, Angela; Prša, Andrej; Horvat, Martin

    2018-01-01

    Standard binary star modeling codes make use of pre-existing solutions of the radiative transfer equation in stellar atmospheres. The various model atmospheres available today are consistently computed for single stars, under different assumptions - plane-parallel or spherical atmosphere approximation, local thermodynamical equilibrium (LTE) or non-LTE (NLTE), etc. However, they are nonetheless being applied to contact binary atmospheres by populating the surface corresponding to each component separately and neglecting any mixing that would typically occur at the contact boundary. In addition, single stellar atmosphere models do not take into account irradiance from a companion star, which can pose a serious problem when modeling close binaries. 1D atmosphere models are also solved under the assumption of an atmosphere in hydrodynamical equilibrium, which is not necessarily the case for contact atmospheres, as the potentially different densities and temperatures can give rise to flows that play a key role in the heat and radiation transfer.To resolve the issue of erroneous modeling of contact binary atmospheres using single star atmosphere tables, we have developed a generalized radiative transfer code for computation of the normal emergent intensity of a stellar surface, given its geometry and internal structure. The code uses a regular mesh of equipotential surfaces in a discrete set of spherical coordinates, which are then used to interpolate the values of the structural quantites (density, temperature, opacity) in any given point inside the mesh. The radiaitive transfer equation is numerically integrated in a set of directions spanning the unit sphere around each point and iterated until the intensity values for all directions and all mesh points converge within a given tolerance. We have found that this approach, albeit computationally expensive, is the only one that can reproduce the intensity distribution of the non-symmetric contact binary atmosphere and

  19. Dispersive effects in radiation transport and radiation hydrodynamics in matter at high density

    International Nuclear Information System (INIS)

    Crowley, B.J.B.

    1983-01-01

    In a recent research program (reported in AWRE 0 20/82) I have investigated the generalisation of the equations of radiation hydrodynamics when electromagnetic radiation is assumed to obey a linear-response dispersion relation of the form nω=kc where the refractive index n depends on the frequency ω and/or wave number k. From the application of the Boltzmann-Liouville transport theory to photons in the short-wavelength (geometrical optics) limit, I derive the energy and momentum equations which, when combined with a classical (Euler-Lagrange-Navier-Stokes) treatment of a fluid material medium in LTE, yield a complete dynamical theory of linear interactions (+ stimulated processes) between incoherent (thermal) radiation and dense, locally isotropic matter. The theory includes an account of pondero-motive forces and electro (magneto) striction. Moreover, it is apparently capable of being generalised to non-linear interactions in which the refractive index depends on the local specific intensity of the radiation field, and, to some extent, to the treatment of high-frequency coherent radiation. The generalisation of various approximated forms of radiation-transport theory (esp. diffusion) has been considered in detail. Some problems remain however. One such is the treatment of anomalous dispersion. Current research work is concentrating on the interesting atomic physics aspects of electromagnetic (esp. radiative) properties of a dispersive material medium

  20. The receptor for advanced glycation end products (RAGE) and the lung.

    LENUS (Irish Health Repository)

    Buckley, Stephen T

    2010-01-01

    The receptor for advanced glycation end products (RAGE) is a member of the immunoglobulin superfamily of cell surface molecules. As a pattern-recognition receptor capable of binding a diverse range of ligands, it is typically expressed at low levels under normal physiological conditions in the majority of tissues. In contrast, the lung exhibits high basal level expression of RAGE localised primarily in alveolar type I (ATI) cells, suggesting a potentially important role for the receptor in maintaining lung homeostasis. Indeed, disruption of RAGE levels has been implicated in the pathogenesis of a variety of pulmonary disorders including cancer and fibrosis. Furthermore, its soluble isoforms, sRAGE, which act as decoy receptors, have been shown to be a useful marker of ATI cell injury. Whilst RAGE undoubtedly plays an important role in the biology of the lung, it remains unclear as to the exact nature of this contribution under both physiological and pathological conditions.

  1. Improved non-local electron thermal transport model for two-dimensional radiation hydrodynamics simulations

    Science.gov (United States)

    Cao, Duc; Moses, Gregory; Delettrez, Jacques

    2015-08-01

    An implicit, non-local thermal conduction algorithm based on the algorithm developed by Schurtz, Nicolai, and Busquet (SNB) [Schurtz et al., Phys. Plasmas 7, 4238 (2000)] for non-local electron transport is presented and has been implemented in the radiation-hydrodynamics code DRACO. To study the model's effect on DRACO's predictive capability, simulations of shot 60 303 from OMEGA are completed using the iSNB model, and the computed shock speed vs. time is compared to experiment. Temperature outputs from the iSNB model are compared with the non-local transport model of Goncharov et al. [Phys. Plasmas 13, 012702 (2006)]. Effects on adiabat are also examined in a polar drive surrogate simulation. Results show that the iSNB model is not only capable of flux-limitation but also preheat prediction while remaining numerically robust and sacrificing little computational speed. Additionally, the results provide strong incentive to further modify key parameters within the SNB theory, namely, the newly introduced non-local mean free path. This research was supported by the Laboratory for Laser Energetics of the University of Rochester.

  2. The AGE-RAGE Axis: Implications for Age-Associated Arterial Diseases

    Directory of Open Access Journals (Sweden)

    Laura M. Senatus

    2017-12-01

    Full Text Available The process of advanced glycation leads to the generation and accumulation of an heterogeneous class of molecules called advanced glycation endproducts, or AGEs. AGEs are produced to accelerated degrees in disorders such as diabetes, renal failure, inflammation, neurodegeneration, and in aging. Further, AGEs are present in foods and in tobacco products. Hence, through both endogenous production and exogenous consumption, AGEs perturb vascular homeostasis by a number of means; in the first case, AGEs can cause cross-linking of long-lived molecules in the basement membranes such as collagens, thereby leading to “vascular stiffening” and processes that lead to hyperpermeability and loss of structural integrity. Second, AGEs interaction with their major cell surface signal transduction receptor for AGE or RAGE sets off a cascade of events leading to modulation of gene expression and loss of vascular and tissue homeostasis, processes that contribute to cardiovascular disease. In addition, it has been shown that an enzyme, which plays key roles in the detoxification of pre-AGE species, glyoxalase 1 (GLO1, is reduced in aged and diabetic tissues. In the diabetic kidney devoid of Ager (gene encoding RAGE, higher levels of Glo1 mRNA and GLO1 protein and activity were observed, suggesting that in conditions of high AGE accumulation, natural defenses may be mitigated, at least in part through RAGE. AGEs are a marker of arterial aging and may be detected by both biochemical means, as well as measurement of “skin autofluorescence.” In this review, we will detail the pathobiology of the AGE-RAGE axis and the consequences of its activation in the vasculature and conclude with potential avenues for therapeutic interruption of the AGE-RAGE ligand-RAGE pathways as means to forestall the deleterious consequences of AGE accumulation and signaling via RAGE.

  3. The RAGE Game Software Components Repository for Supporting Applied Game Development

    Directory of Open Access Journals (Sweden)

    Krassen Stefanov

    2017-09-01

    Full Text Available This paper presents the architecture of the RAGE repository, which is a unique and dedicated infrastructure that provides access to a wide variety of advanced technology components for applied game development. The RAGE project, which is the principal Horizon2020 research and innovation project on applied gaming, develops up to three dozens of software components (RAGE software assets that are reusable across a wide diversity of game engines, game platforms and programming languages. The RAGE repository provides storage space for assets and their artefacts and is designed as an asset life-cycle management system for defining, publishing, updating, searching and packaging for distribution of these assets. It will be embedded in a social platform for asset developers and other users. A dedicated Asset Repository Manager provides the main functionality of the repository and its integration with other systems. Tools supporting the Asset Manager are presented and discussed. When the RAGE repository is in full operation, applied game developers will be able to easily enhance the quality of their games by including selected advanced game software assets. Making available the RAGE repository system and its variety of software assets aims to enhance the coherence and decisiveness of the applied game industry.

  4. Interplay of Laser-Plasma Interactions and Inertial Fusion Hydrodynamics

    International Nuclear Information System (INIS)

    Strozzi, D. J.; Bailey, D. S.; Michel, P.; Divol, L.; Sepke, S. M.

    2017-01-01

    The effects of laser-plasma interactions (LPI) on the dynamics of inertial confinement fusion hohlraums are investigated in this work via a new approach that self-consistently couples reduced LPI models into radiation-hydrodynamics numerical codes. The interplay between hydrodynamics and LPI—specifically stimulated Raman scatter and crossed-beam energy transfer (CBET)—mostly occurs via momentum and energy deposition into Langmuir and ion acoustic waves. This spatially redistributes energy coupling to the target, which affects the background plasma conditions and thus, modifies laser propagation. In conclusion, this model shows reduced CBET and significant laser energy depletion by Langmuir waves, which reduce the discrepancy between modeling and data from hohlraum experiments on wall x-ray emission and capsule implosion shape.

  5. Calculation codes in radiation protection, radiation physics and dosimetry; Codes de calcul en radioprotection, radiophysique et dosimetrie

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2003-07-01

    These scientific days had for objective to draw up the situation of calculation codes of radiation transport, of sources estimation, of radiation doses managements and to draw the future perspectives. (N.C.)

  6. Oligomerization interface of RAGE receptor revealed by MS-monitored hydrogen deuterium exchange.

    Directory of Open Access Journals (Sweden)

    Ewa Sitkiewicz

    Full Text Available Activation of the receptor for advanced glycation end products (RAGE leads to a chronic proinflammatory signal, affecting patients with a variety of diseases. Potentially beneficial modification of RAGE activity requires understanding the signal transduction mechanism at the molecular level. The ligand binding domain is structurally uncoupled from the cytoplasmic domain, suggesting receptor oligomerization is a requirement for receptor activation. In this study, we used hydrogen-deuterium exchange and mass spectrometry to map structural differences between the monomeric and oligomeric forms of RAGE. Our results indicated the presence of a region shielded from exchange in the oligomeric form of RAGE and led to the identification of a new oligomerization interface localized at the linker region between domains C1 and C2. Based on this finding, a model of a RAGE dimer and higher oligomeric state was constructed.

  7. Radical Roles for RAGE in the Pathogenesis of Oxidative Stress in Cardiovascular Diseases and Beyond

    Directory of Open Access Journals (Sweden)

    Radha Ananthakrishnan

    2013-10-01

    Full Text Available Oxidative stress is a central mechanism by which the receptor for advanced glycation endproducts (RAGE mediates its pathological effects. Multiple experimental inquiries in RAGE-expressing cultured cells have demonstrated that ligand-RAGE interaction mediates generation of reactive oxygen species (ROS and consequent downstream signal transduction and regulation of gene expression. The primary mechanism by which RAGE generates oxidative stress is via activation of NADPH oxidase; amplification mechanisms in the mitochondria may further drive ROS production. Recent studies indicating that the cytoplasmic domain of RAGE binds to the formin mDia1 provide further support for the critical roles of this pathway in oxidative stress; mDia1 was required for activation of rac1 and NADPH oxidase in primary murine aortic smooth muscle cells treated with RAGE ligand S100B. In vivo, in multiple distinct disease models in animals, RAGE action generates oxidative stress and modulates cellular/tissue fate in range of disorders, such as in myocardial ischemia, atherosclerosis, and aneurysm formation. Blockade or genetic deletion of RAGE was shown to be protective in these settings. Indeed, beyond cardiovascular disease, evidence is accruing in human subjects linking levels of RAGE ligands and soluble RAGE to oxidative stress in disorders such as doxorubicin toxicity, acetaminophen toxicity, neurodegeneration, hyperlipidemia, diabetes, preeclampsia, rheumatoid arthritis and pulmonary fibrosis. Blockade of RAGE signal transduction may be a key strategy for the prevention of the deleterious consequences of oxidative stress, particularly in chronic disease.

  8. High-order discontinuous Galerkin nonlocal transport and energy equations scheme for radiation hydrodynamics

    Czech Academy of Sciences Publication Activity Database

    Holec, M.; Limpouch, J.; Liska, R.; Weber, Stefan A.

    2017-01-01

    Roč. 83, č. 10 (2017), s. 779-797 ISSN 0271-2091 R&D Projects: GA MŠk EF15_008/0000162; GA MŠk LQ1606 Grant - others:ELI Beamlines(XE) CZ.02.1.01/0.0/0.0/15_008/0000162 Institutional support: RVO:68378271 Keywords : radiation hydrodynamics * nonlocal transport * Knudsen number * multigroup diffusion * radiation coupling Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders OBOR OECD: Nuclear physics Impact factor: 1.652, year: 2016

  9. Targeting receptor for advanced glycation end products (RAGE) expression induces apoptosis and inhibits prostate tumor growth

    International Nuclear Information System (INIS)

    Elangovan, Indira; Thirugnanam, Sivasakthivel; Chen, Aoshuang; Zheng, Guoxing; Bosland, Maarten C.; Kajdacsy-Balla, André; Gnanasekar, Munirathinam

    2012-01-01

    Highlights: ► Targeting RAGE by RNAi induces apoptosis in prostate cancer cells. ► Silencing RAGE expression abrogates rHMGB1 mediated cell proliferation. ► Down regulation of RAGE by RNAi inhibits PSA secretion of prostate cancer cells. ► Knock down of RAGE abrogates prostate tumor growth in vivo. ► Disruption of RAGE expression in prostate tumor activates death receptors. -- Abstract: Expression of receptor for advanced glycation end products (RAGE) plays a key role in the progression of prostate cancer. However, the therapeutic potential of targeting RAGE expression in prostate cancer is not yet evaluated. Therefore in this study, we have investigated the effects of silencing the expression of RAGE by RNAi approach both in vitro and in vivo. The results of this study showed that down regulation of RAGE expression by RNAi inhibited the cell proliferation of androgen-dependent (LNCaP) and androgen-independent (DU-145) prostate cancer cells. Furthermore, targeting RAGE expression resulted in apoptotic elimination of these prostate cancer cells by activation of caspase-8 and caspase-3 death signaling. Of note, the levels of prostate specific antigen (PSA) were also reduced in LNCaP cells transfected with RAGE RNAi constructs. Importantly, the RAGE RNAi constructs when administered in nude mice bearing prostate tumors, inhibited the tumor growth by targeting the expression of RAGE, and its physiological ligand, HMGB1 and by up regulating death receptors DR4 and DR5 expression. Collectively, the results of this study for the first time show that targeting RAGE by RNAi may be a promising alternative therapeutic strategy for treating prostate cancer.

  10. Receptor for advanced glycation endproducts (RAGE maintains pulmonary structure and regulates the response to cigarette smoke.

    Directory of Open Access Journals (Sweden)

    Lisa Wolf

    Full Text Available The receptor for advanced glycation endproducts (RAGE is highly expressed in the lung but its physiological functions in this organ is still not completely understood. To determine the contribution of RAGE to physiological functions of the lung, we analyzed pulmonary mechanics and structure of wildtype and RAGE deficient (RAGE-/- mice. RAGE deficiency spontaneously resulted in a loss of lung structure shown by an increased mean chord length, increased respiratory system compliance, decreased respiratory system elastance and increased concentrations of serum protein albumin in bronchoalveolar lavage fluids. Pulmonary expression of RAGE was mainly localized on alveolar epithelial cells and alveolar macrophages. Primary murine alveolar epithelial cells isolated from RAGE-/- mice revealed an altered differentiation and defective barrier formation under in vitro conditions. Stimulation of interferone-y (IFNy-activated alveolar macrophages deficient for RAGE with Toll-like receptor (TLR ligands resulted in significantly decreased release of proinflammatory cytokines and chemokines. Exposure to chronic cigarette smoke did not affect emphysema-like changes in lung parenchyma in RAGE-/- mice. Acute cigarette smoke exposure revealed a modified inflammatory response in RAGE-/- mice that was characterized by an influx of macrophages and a decreased keratinocyte-derived chemokine (KC release. Our data suggest that RAGE regulates the differentiation of alveolar epithelial cells and impacts on the development and maintenance of pulmonary structure. In cigarette smoke-induced lung pathology, RAGE mediates inflammation that contributes to lung damage.

  11. TESS: A RELATIVISTIC HYDRODYNAMICS CODE ON A MOVING VORONOI MESH

    International Nuclear Information System (INIS)

    Duffell, Paul C.; MacFadyen, Andrew I.

    2011-01-01

    We have generalized a method for the numerical solution of hyperbolic systems of equations using a dynamic Voronoi tessellation of the computational domain. The Voronoi tessellation is used to generate moving computational meshes for the solution of multidimensional systems of conservation laws in finite-volume form. The mesh-generating points are free to move with arbitrary velocity, with the choice of zero velocity resulting in an Eulerian formulation. Moving the points at the local fluid velocity makes the formulation effectively Lagrangian. We have written the TESS code to solve the equations of compressible hydrodynamics and magnetohydrodynamics for both relativistic and non-relativistic fluids on a dynamic Voronoi mesh. When run in Lagrangian mode, TESS is significantly less diffusive than fixed mesh codes and thus preserves contact discontinuities to high precision while also accurately capturing strong shock waves. TESS is written for Cartesian, spherical, and cylindrical coordinates and is modular so that auxiliary physics solvers are readily integrated into the TESS framework and so that this can be readily adapted to solve general systems of equations. We present results from a series of test problems to demonstrate the performance of TESS and to highlight some of the advantages of the dynamic tessellation method for solving challenging problems in astrophysical fluid dynamics.

  12. Investigation of thermal and hydrodynamic processes in the oil transformer radiator cooling system

    OpenAIRE

    Ільїн, Сергій Віталійович

    2013-01-01

    Despite the large number of publications in the field of transformer, heat transfer and hydrodynamic processes that take place in the radiator cooling systems, lack of attention. However, for a comprehensive analysis of the entire oil circuit in the transformer, it is necessary to take into account the work of the radiator, as it was on the efficiency of removal of heat in it will depend on the oil temperature at the inlet of the transformer. To achieve these objectives, this paper describes ...

  13. Simulations of Laboratory Astrophysics Experiments using the CRASH code

    Science.gov (United States)

    Trantham, Matthew; Kuranz, Carolyn; Fein, Jeff; Wan, Willow; Young, Rachel; Keiter, Paul; Drake, R. Paul

    2015-11-01

    Computer simulations can assist in the design and analysis of laboratory astrophysics experiments. The Center for Radiative Shock Hydrodynamics (CRASH) at the University of Michigan developed a code that has been used to design and analyze high-energy-density experiments on OMEGA, NIF, and other large laser facilities. This Eulerian code uses block-adaptive mesh refinement (AMR) with implicit multigroup radiation transport, electron heat conduction and laser ray tracing. This poster will demonstrate some of the experiments the CRASH code has helped design or analyze including: Kelvin-Helmholtz, Rayleigh-Taylor, magnetized flows, jets, and laser-produced plasmas. This work is funded by the following grants: DEFC52-08NA28616, DE-NA0001840, and DE-NA0002032.

  14. Correlation between follicular fluid levels of sRAGE and vitamin D in women with PCOS.

    Science.gov (United States)

    Garg, Deepika; Grazi, Richard; Lambert-Messerlian, Geralyn M; Merhi, Zaher

    2017-11-01

    The pro-inflammatory advanced glycation end products (AGEs) and their anti-inflammatory soluble receptors, sRAGE, play a role in the pathogenesis of PCOS. There is a correlation between vitamin D (vit D) and sRAGE in the serum, whereby vit D replacement increases serum sRAGE levels in women with PCOS, thus incurring a protective anti-inflammatory role. This study aims to compare levels of sRAGE, N-carboxymethyl-lysine (CML; one of the AGEs), and 25-hydroxy-vit D in the follicular fluid (FF) of women with or without PCOS, and to evaluate the correlation between sRAGE and 25-hydroxy-vit D in the FF. Women with (n = 12) or without (n = 13) PCOS who underwent IVF were prospectively enrolled. Women with PCOS had significantly higher anti-Mullerian hormone levels, higher number of total retrieved and mature oocytes, and higher number of day 3 and day 5 embryos formed. Compared to women without PCOS, women with PCOS had significantly lower FF sRAGE levels. In women with PCOS, in women without PCOS, and in all participants together, there was a significant positive correlation between sRAGE and 25-hydroxy-vit D. sRAGE positively correlated with CML in women without PCOS but not in women with PCOS. In women with PCOS, the low ovarian levels of the anti-inflammatory sRAGE suggest that sRAGE could represent a biomarker and a potential therapeutic target for ovarian dysfunction in PCOS. Whether there is a direct causal relationship between sRAGE and vit D in the ovaries remains to be determined.

  15. RAGE polymorphisms and oxidative stress levels in Hashimoto's thyroiditis.

    Science.gov (United States)

    Giannakou, Maria; Saltiki, Katerina; Mantzou, Emily; Loukari, Eleni; Philippou, Georgios; Terzidis, Konstantinos; Lili, Kiriaki; Stavrianos, Charalampos; Kyprianou, Miltiades; Alevizaki, Maria

    2017-05-01

    Polymorphisms of the receptor for advanced glycation end products (RAGE) gene have been studied in various autoimmune disorders, but not in Hashimoto's thyroiditis. Also, increased oxidative stress has been described in patients with Hashimoto's thyroiditis. The aim of this study was to investigate the possible role of two common RAGE polymorphisms (-429T>C, -374T>A) in Hashimoto's thyroiditis; in parallel, we studied oxidative stress levels. A total of 300 consecutive euthyroid women were examined and classified into three groups: Hashimoto's thyroiditis with treatment (n = 96), Hashimoto's thyroiditis without treatment (n = 109) and controls (n = 95). For a rough evaluation of oxidative stress, total lipid peroxide levels in serum were measured. The -429T>C AluI and -374T>A MfeI polymorphisms of RAGE were studied in genomic DNA. Significant association of the RAGE system with Hashimoto's thyroiditis was found only with regard to the prevalence of the -429T>C, but not with -374T>A polymorphism. The levels of oxidative stress were significantly elevated in Hashimoto's thyroiditis patients under treatment. Further analysis demonstrated that an oxidative stress cut-off value of 590 μmol/L is associated with an increased risk of progression of Hashimoto's thyroiditis from euthyroidism to hypothyroidism; this risk is further increased in carriers of the RAGE -429T>C polymorphism. Our findings indicate that both examined risk factors may be implicated in the occurrence of Hashimoto's thyroiditis, but this covers only a fraction of the pathophysiology of the disease. © 2017 Stichting European Society for Clinical Investigation Journal Foundation.

  16. Los Alamos radiation transport code system on desktop computing platforms

    International Nuclear Information System (INIS)

    Briesmeister, J.F.; Brinkley, F.W.; Clark, B.A.; West, J.T.

    1990-01-01

    The Los Alamos Radiation Transport Code System (LARTCS) consists of state-of-the-art Monte Carlo and discrete ordinates transport codes and data libraries. These codes were originally developed many years ago and have undergone continual improvement. With a large initial effort and continued vigilance, the codes are easily portable from one type of hardware to another. The performance of scientific work-stations (SWS) has evolved to the point that such platforms can be used routinely to perform sophisticated radiation transport calculations. As the personal computer (PC) performance approaches that of the SWS, the hardware options for desk-top radiation transport calculations expands considerably. The current status of the radiation transport codes within the LARTCS is described: MCNP, SABRINA, LAHET, ONEDANT, TWODANT, TWOHEX, and ONELD. Specifically, the authors discuss hardware systems on which the codes run and present code performance comparisons for various machines

  17. Receptor for Advanced Glycation End Products (RAGE and Its Ligands: Focus on Spinal Cord Injury

    Directory of Open Access Journals (Sweden)

    Juhyun Song

    2014-07-01

    Full Text Available Spinal cord injury (SCI results in neuronal and glial death and the loss of axons at the injury site. Inflammation after SCI leads to the inhibition of tissue regeneration and reduced neuronal survival. In addition, the loss of axons after SCI results in functional loss below the site of injury accompanied by neuronal cell body’s damage. Consequently, reducing inflammation and promoting axonal regeneration after SCI is a worthy therapeutic goal. The receptor for advanced glycation end products (RAGE is a transmembrane protein and receptor of the immunoglobulin superfamily. RAGE is implicated in inflammation and neurodegeneration. Several recent studies demonstrated an association between RAGE and central nervous system disorders through various mechanisms. However, the relationship between RAGE and SCI has not been shown. It is imperative to elucidate the association between RAGE and SCI, considering that RAGE relates to inflammation and axonal degeneration following SCI. Hence, the present review highlights recent research regarding RAGE as a compelling target for the treatment of SCI.

  18. Development and Verification of Smoothed Particle Hydrodynamics Code for Analysis of Tsunami near NPP

    Energy Technology Data Exchange (ETDEWEB)

    Jo, Young Beom; Kim, Eung Soo [Seoul National Univ., Seoul (Korea, Republic of)

    2014-10-15

    It becomes more complicated when considering the shape and phase of the ground below the seawater. Therefore, some different attempts are required to precisely analyze the behavior of tsunami. This paper introduces an on-going activities on code development in SNU based on an unconventional mesh-free fluid analysis method called Smoothed Particle Hydrodynamics (SPH) and its verification work with some practice simulations. This paper summarizes the on-going development and verification activities on Lagrangian mesh-free SPH code in SNU. The newly developed code can cover equation of motions and heat conduction equation so far, and verification of each models is completed. In addition, parallel computation using GPU is now possible, and GUI is also prepared. If users change input geometry or input values, they can simulate for various conditions geometries. A SPH method has large advantages and potential in modeling of free surface, highly deformable geometry and multi-phase problems that traditional grid-based code has difficulties in analysis. Therefore, by incorporating more complex physical models such as turbulent flow, phase change, two-phase flow, and even solid mechanics, application of the current SPH code is expected to be much more extended including molten fuel behaviors in the sever accident.

  19. An overview of the Los Alamos Crestone Project : uses for astrophysical problems

    Energy Technology Data Exchange (ETDEWEB)

    Weaver, R. P. (Robert P.); Gittings, M. L. (Michael L.); Gisler, Galen R.; Coker, R. F. (Robert F.); New, K. C. (Kimberly C.); Hueckstaedt, R. M. (Robert M.)

    2004-01-01

    The Los Alamos Crestone Project is part of the Department of Energy's (DoE) Advanced Simulation and Computing (ASC) program. The main goal of this project is to investigate the use of continuous adaptive mesh refinement (CAMR) techniques for application to problems of interest to the Laboratory. An overview of the astrophysical simulations performed with the SAGE/RAGE codes will be shown here, including asteroid impacts in the deep-ocean, asteroid impacts on the continental shelf (e.g. - Chicxulub - the dinosaur killer), calculations of massive black holes at the galactic center, and calculations of supernova explosions. Examples of these simulations will be shown. We have shown that the SAGE and RAGE codes of the Crestone Project have been very successful products of the DoE's Advanced Simulation and Computing program. It is clear to those performing massively-parallel computations, that the use of thousands of processors in parallel is fundamentally changing the way we think about computer simulations. The Crestone Project codes are fully utilizing each new ASC supercomputer as they become available. The SAGE and RAGE codes are sophisticated Continuous Adaptive Mesh Refinement hydrodynamics codes for large parallel simulations. SAGE and RAGE are becoming useful tools for astrophysical applications. Further research is starting in a wider variety of areas, including cosmological studies with Mike Norman's group at UCSD.

  20. HELIOS-CR - A 1-D radiation-magnetohydrodynamics code with inline atomic kinetics modeling

    International Nuclear Information System (INIS)

    MacFarlane, J.J.; Golovkin, I.E.; Woodruff, P.R.

    2006-01-01

    HELIOS-CR is a user-oriented 1D radiation-magnetohydrodynamics code to simulate the dynamic evolution of laser-produced plasmas and z-pinch plasmas. It includes an in-line collisional-radiative (CR) model for computing non-LTE atomic level populations at each time step of the hydrodynamics simulation. HELIOS-CR has been designed for ease of use, and is well-suited for experimentalists, as well as graduate and undergraduate student researchers. The energy equations employed include models for laser energy deposition, radiation from external sources, and high-current discharges. Radiative transport can be calculated using either a multi-frequency flux-limited diffusion model, or a multi-frequency, multi-angle short characteristics model. HELIOS-CR supports the use of SESAME equation of state (EOS) tables, PROPACEOS EOS/multi-group opacity data tables, and non-LTE plasma properties computed using the inline CR modeling. Time-, space-, and frequency-dependent results from HELIOS-CR calculations are readily displayed with the HydroPLOT graphics tool. In addition, the results of HELIOS simulations can be post-processed using the SPECT3D Imaging and Spectral Analysis Suite to generate images and spectra that can be directly compared with experimental measurements. The HELIOS-CR package runs on Windows, Linux, and Mac OSX platforms, and includes online documentation. We will discuss the major features of HELIOS-CR, and present example results from simulations

  1. Improved non-local electron thermal transport model for two-dimensional radiation hydrodynamics simulations

    International Nuclear Information System (INIS)

    Cao, Duc; Moses, Gregory; Delettrez, Jacques

    2015-01-01

    An implicit, non-local thermal conduction algorithm based on the algorithm developed by Schurtz, Nicolai, and Busquet (SNB) [Schurtz et al., Phys. Plasmas 7, 4238 (2000)] for non-local electron transport is presented and has been implemented in the radiation-hydrodynamics code DRACO. To study the model's effect on DRACO's predictive capability, simulations of shot 60 303 from OMEGA are completed using the iSNB model, and the computed shock speed vs. time is compared to experiment. Temperature outputs from the iSNB model are compared with the non-local transport model of Goncharov et al. [Phys. Plasmas 13, 012702 (2006)]. Effects on adiabat are also examined in a polar drive surrogate simulation. Results show that the iSNB model is not only capable of flux-limitation but also preheat prediction while remaining numerically robust and sacrificing little computational speed. Additionally, the results provide strong incentive to further modify key parameters within the SNB theory, namely, the newly introduced non-local mean free path. This research was supported by the Laboratory for Laser Energetics of the University of Rochester

  2. Improved non-local electron thermal transport model for two-dimensional radiation hydrodynamics simulations

    Energy Technology Data Exchange (ETDEWEB)

    Cao, Duc; Moses, Gregory [University of Wisconsin—Madison, 1500 Engineering Drive, Madison, Wisconsin 53706 (United States); Delettrez, Jacques [Laboratory for Laser Energetics of the University of Rochester, 250 East River Road, Rochester, New York 14623 (United States)

    2015-08-15

    An implicit, non-local thermal conduction algorithm based on the algorithm developed by Schurtz, Nicolai, and Busquet (SNB) [Schurtz et al., Phys. Plasmas 7, 4238 (2000)] for non-local electron transport is presented and has been implemented in the radiation-hydrodynamics code DRACO. To study the model's effect on DRACO's predictive capability, simulations of shot 60 303 from OMEGA are completed using the iSNB model, and the computed shock speed vs. time is compared to experiment. Temperature outputs from the iSNB model are compared with the non-local transport model of Goncharov et al. [Phys. Plasmas 13, 012702 (2006)]. Effects on adiabat are also examined in a polar drive surrogate simulation. Results show that the iSNB model is not only capable of flux-limitation but also preheat prediction while remaining numerically robust and sacrificing little computational speed. Additionally, the results provide strong incentive to further modify key parameters within the SNB theory, namely, the newly introduced non-local mean free path. This research was supported by the Laboratory for Laser Energetics of the University of Rochester.

  3. A Platform for X-Ray Thomson Scattering Measurements of Radiation Hydrodynamics Experiments on the NIF

    Science.gov (United States)

    Lefevre, Heath; Ma, Kevin; Belancourt, Patrick; MacDonald, Michael; Doeppner, Tilo; Keiter, Paul; Kuranz, Carolyn

    2017-10-01

    A recent experiment on the National Ignition Facility (NIF) radiographed the evolution of the Rayleigh-Taylor (RT) instability under high and low drive cases. This experiment showed that under a high drive the growth rate of the RT instability is reduced relative to the low drive case. The high drive launches a radiative shock, increases the temperature of the post-shock region, and ablates the spikes, which reduces the RT growth rate. The plasma parameters must be measured to validate this claim. We present a target design for making X-Ray Thomson Scattering (XRTS) measurements on radiation hydrodynamics experiments on NIF to measure the electron temperature of the shocked region in the above cases. Specifically, we show that a previously fielded NIF radiation hydrodynamics platform can be modified to allow sufficient signal and temperature resolution for XRTS measurements. This work is funded by the NNSA-DS and SC-OFES Joint Program in High-Energy-Density Laboratory Plasmas, Grant Number DE-NA0002956 and the National Science Foundation through the Basic Plasma Science and Engineering program.

  4. Code of practice for radiation protection in veterinary medicine

    International Nuclear Information System (INIS)

    Duffy, J.; Fenton, D.; McGarry, A.; McAllister, H.; Skelly, C

    2002-11-01

    This Code of Practice updates the Code of Practice on Radiation Protection in Veterinary Radiology prepared by the Nuclear Energy Board in June 1989. The Code is designed to give guidance to veterinary surgeons to ensure that they, their employees and members of the public are adequately protected from the hazards of ionising radiation arising from the use of X-ray equipment and radioactive substances in the practice of veterinary medicine. It reflects the regulations as specified in the Radiological Protection Act, 1991, (Ionising Radiation) Order, 2000 (S.I. No. 125 of 2000)

  5. Narcissistic rage: The Achilles’ heel of the patient with chronic physical illness

    Science.gov (United States)

    Hyphantis, Thomas; Almyroudi, Augustina; Paika, Vassiliki; Goulia, Panagiota; Arvanitakis, Konstantinos

    2009-01-01

    Based on the psychoanalytic reading of Homer’s Iliad whose principal theme is “Achilles’ rage” (the semi-mortal hero invulnerable in all of his body except for his heel, hence “Achilles’ heel” has come to mean a person’s principal weakness), we aimed to assess whether “narcissistic rage” has an impact on several psychosocial variables in patients with severe physical illness across time. In 878 patients with cancer, rheumatological diseases, multiple sclerosis, inflammatory bowel disease, and glaucoma, we assessed psychological distress (SCL-90 and GHQ-28), quality of life (WHOQOL-BREF), interpersonal difficulties (IIP-40), hostility (HDHQ), and defense styles (DSQ). Narcissistic rage comprised DSQ “omnipotence” and HDHQ “extraverted hostility”. Hierarchical multiple regressions analyses were performed. We showed that, in patients with disease duration less than one year, narcissistic rage had a minor impact on psychosocial variables studied, indicating that the rage was rather part of a “normal” mourning process. On the contrary, in patients with longer disease duration, increased rates of narcissistic rage had a great impact on all outcome variables, and the opposite was true for patients with low rates of narcissistic rage, indicating that narcissistic rage constitutes actually an “Achilles’ Heel” for patients with long-term physical illness. These findings may have important clinical implications. PMID:19936167

  6. Numerical simulations of inertial confinement fusion hohlraum with LARED-integration code

    International Nuclear Information System (INIS)

    Li Jinghong; Li Shuanggui; Zhai Chuanlei

    2011-01-01

    In the target design of the Inertial Confinement Fusion (ICF) program, it is common practice to apply radiation hydrodynamics code to study the key physical processes happened in ICF process, such as hohlraum physics, radiation drive symmetry, capsule implosion physics in the radiation-drive approach of ICF. Recently, many efforts have been done to develop our 2D integrated simulation capability of laser fusion with a variety of optional physical models and numerical methods. In order to effectively integrate the existing codes and to facilitate the development of new codes, we are developing an object-oriented structured-mesh parallel code-supporting infrastructure, called JASMIN. Based on two-dimensional three-temperature hohlraum physics code LARED-H and two-dimensional multi-group radiative transfer code LARED-R, we develop a new generation two-dimensional laser fusion code under the JASMIN infrastructure, which enable us to simulate the whole process of laser fusion from the laser beams' entrance into the hohlraum to the end of implosion. In this paper, we will give a brief description of our new-generation two-dimensional laser fusion code, named LARED-Integration, especially in its physical models, and present some simulation results of holhraum. (author)

  7. The RAGE Advanced Game Technologies Repository for Supporting Applied Game Development

    NARCIS (Netherlands)

    Georgiev, Atanas; Grigorov, Alexander; Bontchev, Boyan; Boytchev, Pavel; Stefanov, Krassen; Westera, Wim; Prada, Rui; Hollins, Paul; Moreno Ger, Pablo

    2016-01-01

    This paper describes the structural architecture of the RAGE repository, which is a unique and dedicated infrastructure that provides access to a wide variety of advanced technologies (RAGE software assets) for applied game development. These software assets are reusable across a wide diversity of

  8. Expression of receptor for advanced glycation end-products (RAGE) in thymus from myasthenia patients.

    Science.gov (United States)

    Bouchikh, M; Zouaidia, F; Benhaddou, E H A; Mahassini, N; Achir, A; El Malki, H O

    2017-06-01

    The receptor for advanced glycation end-products (RAGE) is a membranous immunoglobulin involved in the pathogenesis of numerous autoimmune diseases and tumors. The aim of this study was to investigate the possible involvement of RAGE in the pathogenesis of myasthenia gravis. This prospective study included 41 cases of myasthenia gravis treated at our institution between 2010 and 2015. There were 18 men and 23 women, with an average age of 36.44±14.47 years. The majority of patients (24.4%) were classified as IIb, according to MGFA scoring, and 21 of them required corticosteroid and/or immunosuppressive treatment. Assessment of RAGE in thymus specimens was done by immunohistochemistry using RAGE antibody (C-term). RAGE expression was assessed according to various clinical, paraclinical and pathological parameters. Histopathological studies found 18 thymomas, 17 hyperplasias and six other types of pathology. Expression of RAGE was negative/weak in 19 cases and moderate/strong in 22 cases. It was more important in thymoma type B2 (Pmyasthenia was short (P=0.04), and was not significantly related to either myasthenia clinical severity or preoperative treatment. Our results suggest that the RAGE pathway is involved in myasthenia gravis pathophysiology, especially at disease onset, and in forms with thymomas. Further studies would be indispensable to explore other aspects of this signaling pathway, especially the potential role of different ligands and soluble forms of RAGE. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  9. Spectroscopic analysis of Cepheid variables with 2D radiation-hydrodynamic simulations

    Science.gov (United States)

    Vasilyev, Valeriy

    2018-06-01

    The analysis of chemical enrichment history of dwarf galaxies allows to derive constraints on their formation and evolution. In this context, Cepheids play a very important role, as these periodically variable stars provide a means to obtain accurate distances. Besides, chemical composition of Cepheids can provide a strong constraint on the chemical evolution of the system. Standard spectroscopic analysis of Cepheids is based on using one-dimensional (1D) hydrostatic model atmospheres, with convection parametrised using the mixing-length theory. However, this quasi-static approach has theoretically not been validated. In my talk, I will discuss the validity of the quasi-static approximation in spectroscopy of short-periodic Cepheids. I will show the results obtained using a 2D time-dependent envelope model of a pulsating star computed with the radiation-hydrodynamics code CO5BOLD. I will then describe the impact of new models on the spectroscopic diagnostic of the effective temperature, surface gravity, microturbulent velocity, and metallicity. One of the interesting findings of my work is that 1D model atmospheres provide unbiased estimates of stellar parameters and abundances of Cepheid variables for certain phases of their pulsations. Convective inhomogeneities, however, also introduce biases. I will then discuss how these results can be used in a wider parameter space of pulsating stars and present an outlook for the future studies.

  10. Dynamic changes in sRAGE levels and relationship with cardiac function in STEMI patients

    DEFF Research Database (Denmark)

    Jensen, Louise J N; Lindberg, Søren; Hoffmann, Søren

    2015-01-01

    the dynamic changes in sRAGE levels during AMI and relationship with cardiac dysfunction. DESIGN AND METHODS: We prospectively included 80 patients with ST-elevation myocardial infarction (STEMI) treated with primary percutaneous coronary intervention (pPCI). sRAGE concentrations were measured before p...... in the early phase of AMI; sRAGE levels significantly increased after pPCI compared with sRAGE before pPCI (median ratio: 1.25, 95% CI: 1.15-1.35, P...phase rather than in the days after AMI and pPCI. The increase...

  11. Circulating soluble RAGE isoforms are attenuated in obese, impaired-glucose-tolerant individuals and are associated with the development of type 2 diabetes

    DEFF Research Database (Denmark)

    Miranda, Edwin R; Somal, Vikram S; Mey, Jacob T

    2017-01-01

    The soluble receptor for advanced glycation end products (sRAGE) may be protective against inflammation associated with obesity and type 2 diabetes (T2DM). The aim of this study was to determine the distribution of sRAGE isoforms and whether sRAGE isoforms are associated with risk of T2DM...... development in subjects spanning the glucose tolerance continuum. In this retrospective analysis, circulating total sRAGE and endogenous secretory RAGE (esRAGE) were quantified via ELISA, and cleaved RAGE (cRAGE) was calculated in 274 individuals stratified by glucose tolerance status (GTS) and obesity. Group......RAGE, and esRAGE were all lower with IGT and T2DM, while the ratio of cRAGE to esRAGE (cRAGE:esRAGE) was only lower (P obesity, cRAGE:esRAGE was higher with obesity and lower with IGT (P

  12. The inertial properties of pulsing interflow area of counterflow hydrodynamic radiator

    Directory of Open Access Journals (Sweden)

    Тetyana V. Makarova

    2015-12-01

    Full Text Available The jet hydrodynamic radiators (HDR are the devices where part of kinetic energy of flooded jet is transformed to pulsations of internal interflow area and flow shell fluctuations. The sound generation process in HDR is involved with its constructional features. Aim: The aim of this work is to study the inertial properties of the HDR pulsating interflow area taking into account its geometric singularities. Materials and Methods: It was proposed to study the pulsating area using the simplified sphere model of pulsating cavitating area of the counterflow type jet hydrodynamic radiator. This radiator can be implemented in two modifications: taking into account the volume that occupies by jet from the nozzle with and without accounting of it. Results: The characteristic dimensions and spatial restrictions are determined for the mentioned modifications based on the research results. The own mass, apparent mass and total mass of pulsating area (pulsator were determined. The dependencies of the corresponding mass relations versus pulsator radius were obtained. Conclusions: It was shown that specifically apparent mass has dominance in total one and it is almost 6 times greater than pulsator own mass. The consideration of the central axial passage occupied by jet out of muzzle increases the contribution of apparent mass to total mass. The influence of apparent mass intensifies under increase of the gas content of dual-phase environment, i.e. under cavitation propagation. The total masses of pulsating area are nearest one to another in various models modifications due to cancellation effect of two factors - increase of pulsator apparent mass and decrease of its own mass under comparatively low sphere volume.

  13. N(epsilon)-carboxymethyllysine-modified proteins are unable to bind to RAGE and activate an inflammatory response.

    Science.gov (United States)

    Buetler, Timo M; Leclerc, Estelle; Baumeyer, Alexandra; Latado, Helia; Newell, John; Adolfsson, Oskar; Parisod, Véronique; Richoz, Janique; Maurer, Sarah; Foata, Francis; Piguet, Dominique; Junod, Sylviane; Heizmann, Claus W; Delatour, Thierry

    2008-03-01

    Advanced glycation endproducts (AGEs) containing carboxymethyllysine (CML) modifications are generally thought to be ligands of the receptor for AGEs, RAGEs. It has been argued that this results in the activation of pro-inflammatory pathways and diseases. However, it has not been shown conclusively that a CML-modified protein can interact directly with RAGE. Here, we have analyzed whether beta-lactoglobulin (bLG) or human serum albumin (HSA) modified chemically to contain only CML (10-40% lysine modification) can (i) interact with RAGE in vitro and (ii) interact with and activate RAGE in lung epithelial cells. Our results show that CML-modified bLG or HSA are unable to bind to RAGE in a cell-free assay system (Biacore). Furthermore, they are unable to activate pro-inflammatory signaling in the cellular system. Thus, CML probably does not form the necessary structure(s) to interact with RAGE and activate an inflammatory signaling cascade in RAGE-expressing cells.

  14. RAGE mediates the inactivation of nAChRs in sympathetic neurons under high glucose conditions.

    Science.gov (United States)

    Chandna, Andrew R; Nair, Manoj; Chang, Christine; Pennington, Paul R; Yamamoto, Yasuhiko; Mousseau, Darrell D; Campanucci, Verónica A

    2015-02-01

    Autonomic dysfunction is a serious complication of diabetes and can lead to cardiovascular abnormalities and premature death. It was recently proposed that autonomic dysfunction is triggered by oxidation-mediated inactivation of neuronal nicotinic acetylcholine receptors (nAChRs), impairing synaptic transmission in sympathetic ganglia and resulting in autonomic failure. We investigated whether the receptor for advanced glycation end products (RAGE) and its role in the generation of reactive oxygen species (ROS) could be contributing to the events that initiate sympathetic malfunction under high glucose conditions. Using biochemical, live imaging and electrophysiological tools we demonstrated that exposure of sympathetic neurons to high glucose increases RAGE expression and oxidative markers, and that incubation with RAGE ligands (e.g. AGEs, S100 and HMGB1) mimics both ROS elevation and nAChR inactivation. In contrast, co-treatment with either antioxidants or an anti-RAGE IgG prevented the inactivation of nAChRs. Lastly, a role for RAGE in this context was corroborated by the lack of sensitivity of sympathetic neurons from RAGE knock-out mice to high glucose. These data define a pivotal role for RAGE in initiating the events associated with exposure of sympathetic neurons to high glucose, and strongly support RAGE signaling as a potential therapeutic target in the autonomic complications associated with diabetes. © 2014 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

  15. Protocatechuic aldehyde ameliorates experimental pulmonary fibrosis by modulating HMGB1/RAGE pathway

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Liang, E-mail: countryspring@sina.com; Ji, Yunxia, E-mail: 413499057@qq.com; Kang, Zechun, E-mail: davidjiangwl@163.com; Lv, Changjun, E-mail: Lucky_lcj@sina.com; Jiang, Wanglin, E-mail: jwl518@163.com

    2015-02-15

    An abnormal high mobility group box 1 (HMGB1) activation and a decrease in receptor for advanced glycation end-product (RAGE) play a key role in the pathogenesis of pulmonary fibrosis. Protocatechuic aldehyde (PA) is a naturally occurring compound, which is extracted from the degradation of phenolic acids. However, whether PA has anti-fibrotic functions is unknown. In this study, the effects of PA on the transforming growth factor-β1 (TGF-β1)-mediated epithelial–mesenchymal transition (EMT) in A549 cells, on the apoptosis of human type I alveolar epithelial cells (AT I), on the proliferation of human lung fibroblasts (HLF-1) in vitro, and on bleomycin (BLM)-induced pulmonary fibrosis in vivo were investigated. PA treatment resulted in a reduction of EMT in A549 cells with a decrease in vimentin and HMGB, an increase of E-cadherin and RAGE, a reduction of HLF-1 proliferation with a decrease of fibroblast growth factor 2 (FGF-2) and platelet-derived growth factor (PDGF). Apoptosis of AT I was attenuated with an increase of RAGE. PA ameliorated BLM-induced pulmonary fibrosis in rats with a reduction of histopathological scores and collagen deposition, and a lower FGF-2, PDGF, α-smooth muscle actin (α-SMA) and HMGB1 expression, whereas higher RAGE was found in BLM-instilled lungs. Through the decrease of HGMB1 and the regulation of RAGE, PA reversed the EMT, inhibited HLF-1 proliferation as well as reduced apoptosis in AT I, and prevented pulmonary fibrosis in vivo. Collectively, our results demonstrate that PA prevents experimental pulmonary fibrosis by modulating HMGB1/RAGE pathway. - Highlights: • PA prevents EMT, reduces the apoptosis of AT1 in vitro. • PA decreases proliferation of HLF-1, reduces PDGF and FGF expression in vitro. • PA prevents experimental pulmonary fibrosis by modulating the HMGB1/RAGE pathway.

  16. Protocatechuic aldehyde ameliorates experimental pulmonary fibrosis by modulating HMGB1/RAGE pathway

    International Nuclear Information System (INIS)

    Zhang, Liang; Ji, Yunxia; Kang, Zechun; Lv, Changjun; Jiang, Wanglin

    2015-01-01

    An abnormal high mobility group box 1 (HMGB1) activation and a decrease in receptor for advanced glycation end-product (RAGE) play a key role in the pathogenesis of pulmonary fibrosis. Protocatechuic aldehyde (PA) is a naturally occurring compound, which is extracted from the degradation of phenolic acids. However, whether PA has anti-fibrotic functions is unknown. In this study, the effects of PA on the transforming growth factor-β1 (TGF-β1)-mediated epithelial–mesenchymal transition (EMT) in A549 cells, on the apoptosis of human type I alveolar epithelial cells (AT I), on the proliferation of human lung fibroblasts (HLF-1) in vitro, and on bleomycin (BLM)-induced pulmonary fibrosis in vivo were investigated. PA treatment resulted in a reduction of EMT in A549 cells with a decrease in vimentin and HMGB, an increase of E-cadherin and RAGE, a reduction of HLF-1 proliferation with a decrease of fibroblast growth factor 2 (FGF-2) and platelet-derived growth factor (PDGF). Apoptosis of AT I was attenuated with an increase of RAGE. PA ameliorated BLM-induced pulmonary fibrosis in rats with a reduction of histopathological scores and collagen deposition, and a lower FGF-2, PDGF, α-smooth muscle actin (α-SMA) and HMGB1 expression, whereas higher RAGE was found in BLM-instilled lungs. Through the decrease of HGMB1 and the regulation of RAGE, PA reversed the EMT, inhibited HLF-1 proliferation as well as reduced apoptosis in AT I, and prevented pulmonary fibrosis in vivo. Collectively, our results demonstrate that PA prevents experimental pulmonary fibrosis by modulating HMGB1/RAGE pathway. - Highlights: • PA prevents EMT, reduces the apoptosis of AT1 in vitro. • PA decreases proliferation of HLF-1, reduces PDGF and FGF expression in vitro. • PA prevents experimental pulmonary fibrosis by modulating the HMGB1/RAGE pathway

  17. Coupled Hydrodynamic Instability Growth on Oblique Interfaces with a Reflected Rarefaction

    Science.gov (United States)

    Rasmus, A. M.; Flippo, K. A.; di Stefano, C. A.; Doss, F. W.; Hager, J. D.; Merritt, E. C.; Cardenas, T.; Schmidt, D. W.; Kline, J. L.; Kuranz, C. C.

    2017-10-01

    Hydrodynamic instabilities play an important role in the evolution of inertial confinement fusion and astrophysical phenomena. Three of the Omega-EP long pulse beams (10 ns square pulse, 14 kJ total energy, 1.1 mm spot size) drive a supported shock across a heavy-to-light, oblique, interface. Single- and double-mode initial conditions seed coupled Richtmyer-Meshkov (RM), Rayleigh-Taylor (RT), and Kelvin-Helmholtz (KH) growth. At early times, growth is dominated by RM and KH, whereas at late times a rarefaction from laser turn-off reaches the interface, leading to decompression and RT growth. The addition of a thirty degree tilt does not alter mix width to within experimental error bars, even while significantly altering spike and bubble morphology. The results of single and double-mode experiments along with simulations using the multi-physics hydro-code RAGE will be presented. This work performed under the auspices of the U.S. Department of Energy by LANL under contract DE-AC52-06NA25396. This work is funded by the NNSA-DS and SC-OFES Joint Program in High-Energy-Density Laboratory Plasmas, Grant Number DE-NA0002956. This material is partially supported by DOE Office of Science Graduate Student Research (SCGSR) program.

  18. A 3D spectral anelastic hydrodynamic code for shearing, stratified flows

    Science.gov (United States)

    Barranco, Joseph A.; Marcus, Philip S.

    2006-11-01

    We have developed a three-dimensional (3D) spectral hydrodynamic code to study vortex dynamics in rotating, shearing, stratified systems (e.g., the atmosphere of gas giant planets, protoplanetary disks around newly forming protostars). The time-independent background state is stably stratified in the vertical direction and has a unidirectional linear shear flow aligned with one horizontal axis. Superposed on this background state is an unsteady, subsonic flow that is evolved with the Euler equations subject to the anelastic approximation to filter acoustic phenomena. A Fourier Fourier basis in a set of quasi-Lagrangian coordinates that advect with the background shear is used for spectral expansions in the two horizontal directions. For the vertical direction, two different sets of basis functions have been implemented: (1) Chebyshev polynomials on a truncated, finite domain, and (2) rational Chebyshev functions on an infinite domain. Use of this latter set is equivalent to transforming the infinite domain to a finite one with a cotangent mapping, and using cosine and sine expansions in the mapped coordinate. The nonlinear advection terms are time-integrated explicitly, the pressure/enthalpy terms are integrated semi-implicitly, and the Coriolis force and buoyancy terms are treated semi-analytically. We show that internal gravity waves can be damped by adding new terms to the Euler equations. The code exhibits excellent parallel performance with the message passing interface (MPI). As a demonstration of the code, we simulate the merger of two 3D vortices in the midplane of a protoplanetary disk.

  19. The AGE-RAGE axis in an Arab population: The United Arab Emirates Healthy Futures (UAEHFS pilot study

    Directory of Open Access Journals (Sweden)

    Claire K. Inman

    2017-12-01

    Full Text Available Aims: The transformation of the United Arab Emirates (UAE from a semi-nomadic to a high income society has been accompanied by increasing rates of obesity and Type 2 diabetes mellitus. We examined if the AGE-RAGE (receptor for advanced glycation endproducts axis is associated with obesity and diabetes mellitus in the pilot phase of the UAE Healthy Futures Study (UAEHFS. Methods: 517 Emirati subjects were enrolled and plasma/serum levels of AGE, carboxy methyl lysine (CML-AGE, soluble (sRAGE and endogenous secretory (esRAGE were measured along with weight, height, waist and hip circumference (WC/HC, blood pressure, HbA1c, Vitamin D levels and routine chemistries. The relationship between the AGE-RAGE axis and obesity and diabetes mellitus was tested using proportional odds models and linear regression. Results: After covariate adjustment, AGE levels were significantly associated with diabetes status. Levels of sRAGE and esRAGE were associated with BMI and levels of sRAGE were associated with WC/HC. Conclusions: The AGE-RAGE axis is associated with diabetes status and obesity in this Arab population. Prospective serial analysis of this axis may identify predictive biomarkers of obesity and cardiometabolic dysfunction in the UAEHFS. Keywords: Advanced glycation endproducts (AGEs, Receptor for AGE (RAGE, Cohort study, Diabetes mellitus, Obesity

  20. Experiences and results multitasking a hydrodynamics code on global and local memory machines

    International Nuclear Information System (INIS)

    Mandell, D.

    1987-01-01

    A one-dimensional, time-dependent Lagrangian hydrodynamics code using a Godunov solution method has been multimasked for the Cray X-MP/48, the Intel iPSC hypercube, the Alliant FX series and the IBM RP3 computers. Actual multitasking results have been obtained for the Cray, Intel and Alliant computers and simulated results were obtained for the Cray and RP3 machines. The differences in the methods required to multitask on each of the machines is discussed. Results are presented for a sample problem involving a shock wave moving down a channel. Comparisons are made between theoretical speedups, predicted by Amdahl's law, and the actual speedups obtained. The problems of debugging on the different machines are also described

  1. Parallel processing Monte Carlo radiation transport codes

    International Nuclear Information System (INIS)

    McKinney, G.W.

    1994-01-01

    Issues related to distributed-memory multiprocessing as applied to Monte Carlo radiation transport are discussed. Measurements of communication overhead are presented for the radiation transport code MCNP which employs the communication software package PVM, and average efficiency curves are provided for a homogeneous virtual machine

  2. Advanced glycation endproduct (AGE) accumulation and AGE receptor (RAGE) up‐regulation contribute to the onset of diabetic cardiomyopathy

    Science.gov (United States)

    Ma, Heng; Li, Shi‐Yan; Xu, Peisheng; Babcock, Sara A.; Dolence, E. Kurt; Brownlee, Michael; Li, Ji

    2008-01-01

    Abstract Diabetic cardiomyopathy is manifested by compromised systolic and diastolic function. This study was designed to examine the role of advanced glycation endproduct (AGE) and AGE receptor (RAGE) in diabetic cardiomyopathy. Heart function was assessed in isolated control and streptozotocin‐induced diabetic hearts following in vivo RAGE gene knockdown using RNA interference. Cardiomyocyte mechanical properties were evaluated including peak shortening (PS), time‐to‐PS (TPS) and time‐to‐90% relengthening (TR90). RAGE was assayed by RT‐PCR and immunoblot. Diabetes significantly enhanced cardiac MG, AGE and RAGE levels accompanied with colocalization of AGE and RAGE in cardiomyocytes. Diabetes‐elicited increase in RAGE was inhibited by in vivo siRNA interference. The AGE formation inhibitor benfotiamine significantly attenuated diabetes‐induced elevation in MG, AGE, RAGE and collagen cross‐linking without affecting hypertriglyceridaemia and hypercholesterolaemia in diabetes. Diabetes markedly decreased LV contractility, as evidenced by reduced ±dP/dt and LV developed pressure (LVDP), which were protected by RAGE gene knockdown. In addition, MG‐derived AGE (MG‐AGE) up‐regulated cardiac RAGE mRNA and triggered cardiomyocyte contractile dysfunction reminiscent of diabetic cardiomyopathy. The MG‐AGE‐elicited prolongation of TPS and TR90 was ablated by an anti‐RAGE antibody in cardiomyocytes. Interestingly, MG‐AGE‐induced cardiomyocyte dysfunction was associated with mitochondrial membrane potential (MMP) depolarization and reduced GSK‐3β inactivation in control cardiomyocytes, similar to those from in vivo diabetes. Treatment with siRNA‐RAGE ablated diabetes‐induced MMP depolarization and GSK‐3β inactivation. Collectively, our result implicated a role of AGE‐RAGE in the pathogenesis of diabetic cardiomyopathy. PMID:19602045

  3. The AGE-RAGE axis in an Arab population: The United Arab Emirates Healthy Futures (UAEHFS) pilot study.

    Science.gov (United States)

    Inman, Claire K; Aljunaibi, Abdullah; Koh, Hyunwook; Abdulle, Abdishakur; Ali, Raghib; Alnaeemi, Abdullah; Al Zaabi, Eiman; Oumeziane, Naima; Al Bastaki, Marina; Al-Houqani, Mohammed; Al-Maskari, Fatma; Al Dhaheri, Ayesha; Shah, Syed M; Abdel Wareth, Laila; Al Mahmeed, Wael; Alsafar, Habiba; Al Anouti, Fatme; Al Hosani, Ayesha; Haji, Muna; Galani, Divya; O'Connor, Matthew J; Ahn, Jiyoung; Kirchhoff, Tomas; Sherman, Scott; Hayes, Richard B; Li, Huilin; Ramasamy, Ravichandran; Schmidt, Ann Marie

    2017-12-01

    The transformation of the United Arab Emirates (UAE) from a semi-nomadic to a high income society has been accompanied by increasing rates of obesity and Type 2 diabetes mellitus. We examined if the AGE-RAGE (receptor for advanced glycation endproducts) axis is associated with obesity and diabetes mellitus in the pilot phase of the UAE Healthy Futures Study (UAEHFS). 517 Emirati subjects were enrolled and plasma/serum levels of AGE, carboxy methyl lysine (CML)-AGE, soluble (s)RAGE and endogenous secretory (es)RAGE were measured along with weight, height, waist and hip circumference (WC/HC), blood pressure, HbA1c, Vitamin D levels and routine chemistries. The relationship between the AGE-RAGE axis and obesity and diabetes mellitus was tested using proportional odds models and linear regression. After covariate adjustment, AGE levels were significantly associated with diabetes status. Levels of sRAGE and esRAGE were associated with BMI and levels of sRAGE were associated with WC/HC. The AGE-RAGE axis is associated with diabetes status and obesity in this Arab population. Prospective serial analysis of this axis may identify predictive biomarkers of obesity and cardiometabolic dysfunction in the UAEHFS.

  4. Numerical simulations for radiation hydrodynamics. 2: Transport limit

    International Nuclear Information System (INIS)

    Dai, W.W.; Woodward, P.R.

    2000-01-01

    A finite difference scheme is proposed for two-dimensional radiation hydrodynamical equations in the transport limit. The scheme is of Godunov-type, in which the set of time-averaged flux needed in the scheme is calculated through Riemann problems solved. In the scheme, flow signals are explicitly treated, while radiation signals are implicitly treated. Flow fields and radiation fields are updated simultaneously. An iterative approach is proposed to solve the set of nonlinear algebraic equations arising from the implicitness of the scheme. The sweeping method used in the scheme significantly reduces the number of iterations or computer CPU time needed. A new approach to further accelerate the convergence is proposed, which further reduces the number of iterations needed by more than one order. No matter how many cells radiation signals propagate in one time step, only an extremely small number of iterations are needed in the scheme, and each iteration costs only about 0.8% of computer CPU time which is needed for one time step of a second order accurate and fully explicit scheme. Two-dimensional problems are treated through a dimensionally split technique. Therefore, iterations for solving the set of algebraic equations are carried out only in each one-dimensional sweep. Through numerical examples it is shown that the scheme keeps the principle advantages of Godunov schemes for flow motion. In the time scale of flow motion numerical results are the same as those obtained from a second order accurate and fully explicit scheme. The acceleration of the convergence proposed in this paper may be directly applied to other hyperbolic systems. This study is important for laser fusion and astrophysics

  5. A new relativistic viscous hydrodynamics code and its application to the Kelvin-Helmholtz instability in high-energy heavy-ion collisions

    Energy Technology Data Exchange (ETDEWEB)

    Okamoto, Kazuhisa [Nagoya University, Department of Physics, Nagoya (Japan); Nonaka, Chiho [Nagoya University, Department of Physics, Nagoya (Japan); Nagoya University, Kobayashi-Maskawa Institute for the Origin of Particles and the Universe (KMI), Nagoya (Japan); Duke University, Department of Physics, Durham, NC (United States)

    2017-06-15

    We construct a new relativistic viscous hydrodynamics code optimized in the Milne coordinates. We split the conservation equations into an ideal part and a viscous part, using the Strang spitting method. In the code a Riemann solver based on the two-shock approximation is utilized for the ideal part and the Piecewise Exact Solution (PES) method is applied for the viscous part. We check the validity of our numerical calculations by comparing analytical solutions, the viscous Bjorken's flow and the Israel-Stewart theory in Gubser flow regime. Using the code, we discuss possible development of the Kelvin-Helmholtz instability in high-energy heavy-ion collisions. (orig.)

  6. A new relativistic viscous hydrodynamics code and its application to the Kelvin-Helmholtz instability in high-energy heavy-ion collisions

    Science.gov (United States)

    Okamoto, Kazuhisa; Nonaka, Chiho

    2017-06-01

    We construct a new relativistic viscous hydrodynamics code optimized in the Milne coordinates. We split the conservation equations into an ideal part and a viscous part, using the Strang spitting method. In the code a Riemann solver based on the two-shock approximation is utilized for the ideal part and the Piecewise Exact Solution (PES) method is applied for the viscous part. We check the validity of our numerical calculations by comparing analytical solutions, the viscous Bjorken's flow and the Israel-Stewart theory in Gubser flow regime. Using the code, we discuss possible development of the Kelvin-Helmholtz instability in high-energy heavy-ion collisions.

  7. Treatment of compounds and alloys in radiation hydrodynamics simulations of ablative laser loading

    International Nuclear Information System (INIS)

    Swift, Damian C.; Gammel, J. Tinka; Clegg, Samuel M.

    2004-01-01

    Different methods were compared for constructing models of the behavior of a prototype intermetallic compound, nickel aluminide, for use in radiation hydrodynamics simulations of shock wave generation by ablation induced by laser energy. The models included the equation of state, ionization, and radiation opacity. The methods of construction were evaluated by comparing the results of simulations of an ablatively generated shock wave in a sample of the alloy. The most accurate simulations were obtained using the 'constant number density' mixture model to calculate the equation of state and opacity, and Thomas-Fermi ionization. This model is consistent with that found to be most accurate for simulations of ablatively shocked elements

  8. Initial conditions of radiative shock experiments

    International Nuclear Information System (INIS)

    Kuranz, C. C.; Drake, R. P.; Krauland, C. M.; Marion, D. C.; Grosskopf, M. J.; Rutter, E.; Torralva, B.; Holloway, J. P.; Bingham, D.; Goh, J.; Boehly, T. R.; Sorce, A. T.

    2013-01-01

    We performed experiments at the Omega Laser Facility to characterize the initial, laser-driven state of a radiative shock experiment. These experiments aimed to measure the shock breakout time from a thin, laser-irradiated Be disk. The data are then used to inform a range of valid model parameters, such as electron flux limiter and polytropic γ, used when simulating radiative shock experiments using radiation hydrodynamics codes. The characterization experiment and the radiative shock experiment use a laser irradiance of ∼7 × 10 14 W cm −2 to launch a shock in the Be disk. A velocity interferometer and a streaked optical pyrometer were used to infer the amount of time for the shock to move through the Be disk. The experimental results were compared with simulation results from the Hyades code, which can be used to model the initial conditions of a radiative shock system using the CRASH code

  9. Structural insights into calcium-bound S100P and the V domain of the RAGE complex.

    Directory of Open Access Journals (Sweden)

    Srinivasa R Penumutchu

    Full Text Available The S100P protein is a member of the S100 family of calcium-binding proteins and possesses both intracellular and extracellular functions. Extracellular S100P binds to the cell surface receptor for advanced glycation end products (RAGE and activates its downstream signaling cascade to meditate tumor growth, drug resistance and metastasis. Preventing the formation of this S100P-RAGE complex is an effective strategy to treat various disease conditions. Despite its importance, the detailed structural characterization of the S100P-RAGE complex has not yet been reported. In this study, we report that S100P preferentially binds to the V domain of RAGE. Furthermore, we characterized the interactions between the RAGE V domain and Ca(2+-bound S100P using various biophysical techniques, including isothermal titration calorimetry (ITC, fluorescence spectroscopy, multidimensional NMR spectroscopy, functional assays and site-directed mutagenesis. The entropy-driven binding between the V domain of RAGE and Ca(+2-bound S100P was found to lie in the micromolar range (Kd of ∼ 6 µM. NMR data-driven HADDOCK modeling revealed the putative sites that interact to yield a proposed heterotetrameric model of the S100P-RAGE V domain complex. Our study on the spatial structural information of the proposed protein-protein complex has pharmaceutical relevance and will significantly contribute toward drug development for the prevention of RAGE-related multifarious diseases.

  10. Differential effects of ethanol on feline rage and predatory attack behavior: an underlying neural mechanism.

    Science.gov (United States)

    Schubert, K; Shaikh, M B; Han, Y; Poherecky, L; Siegel, A

    1996-08-01

    Previous studies have shown that, at certain dose levels, ethanol can exert a powerful, facilitatory effect on aggressive behavior in both animals and humans. In the cat, however, it was discovered that ethanol differentially alters two forms of aggression that are common to this species. Defensive rage behavior is significantly enhanced, whereas predatory attack behavior is suppressed by ethanol administration. One possible mechanism governing alcohol's potentiation of defensive rage behavior is that it acts on the descending pathway from the medial hypothalamus to the midbrain periaqueductal gray (PAG)-an essential pathway for the expression of defensive rage behavior that uses excitatory amino acids as a neurotransmitter. This hypothesis is supported by the finding that the excitatory effects of alcohol on defensive rage behavior are blocked by administration of the N-methyl-D-aspartate antagonist alpha-2-amino-7-phosphoheptanoic acid (AP-7) when microinjected into the periaqueductal gray, a primary neuronal target of descending fibers from the medial hypothalamus that mediate the expression of defensive rage behavior. Thus, the present study establishes for the first time a specific component of the neural circuit for defensive rage behavior over which the potentiating effects of ethanol are mediated.

  11. REIONIZATION ON LARGE SCALES. I. A PARAMETRIC MODEL CONSTRUCTED FROM RADIATION-HYDRODYNAMIC SIMULATIONS

    International Nuclear Information System (INIS)

    Battaglia, N.; Trac, H.; Cen, R.; Loeb, A.

    2013-01-01

    We present a new method for modeling inhomogeneous cosmic reionization on large scales. Utilizing high-resolution radiation-hydrodynamic simulations with 2048 3 dark matter particles, 2048 3 gas cells, and 17 billion adaptive rays in a L = 100 Mpc h –1 box, we show that the density and reionization redshift fields are highly correlated on large scales (∼> 1 Mpc h –1 ). This correlation can be statistically represented by a scale-dependent linear bias. We construct a parametric function for the bias, which is then used to filter any large-scale density field to derive the corresponding spatially varying reionization redshift field. The parametric model has three free parameters that can be reduced to one free parameter when we fit the two bias parameters to simulation results. We can differentiate degenerate combinations of the bias parameters by combining results for the global ionization histories and correlation length between ionized regions. Unlike previous semi-analytic models, the evolution of the reionization redshift field in our model is directly compared cell by cell against simulations and performs well in all tests. Our model maps the high-resolution, intermediate-volume radiation-hydrodynamic simulations onto lower-resolution, larger-volume N-body simulations (∼> 2 Gpc h –1 ) in order to make mock observations and theoretical predictions

  12. Benchmarking the Multidimensional Stellar Implicit Code MUSIC

    Science.gov (United States)

    Goffrey, T.; Pratt, J.; Viallet, M.; Baraffe, I.; Popov, M. V.; Walder, R.; Folini, D.; Geroux, C.; Constantino, T.

    2017-04-01

    We present the results of a numerical benchmark study for the MUltidimensional Stellar Implicit Code (MUSIC) based on widely applicable two- and three-dimensional compressible hydrodynamics problems relevant to stellar interiors. MUSIC is an implicit large eddy simulation code that uses implicit time integration, implemented as a Jacobian-free Newton Krylov method. A physics based preconditioning technique which can be adjusted to target varying physics is used to improve the performance of the solver. The problems used for this benchmark study include the Rayleigh-Taylor and Kelvin-Helmholtz instabilities, and the decay of the Taylor-Green vortex. Additionally we show a test of hydrostatic equilibrium, in a stellar environment which is dominated by radiative effects. In this setting the flexibility of the preconditioning technique is demonstrated. This work aims to bridge the gap between the hydrodynamic test problems typically used during development of numerical methods and the complex flows of stellar interiors. A series of multidimensional tests were performed and analysed. Each of these test cases was analysed with a simple, scalar diagnostic, with the aim of enabling direct code comparisons. As the tests performed do not have analytic solutions, we verify MUSIC by comparing it to established codes including ATHENA and the PENCIL code. MUSIC is able to both reproduce behaviour from established and widely-used codes as well as results expected from theoretical predictions. This benchmarking study concludes a series of papers describing the development of the MUSIC code and provides confidence in future applications.

  13. Numerical Methods for Radiation Magnetohydrodynamics in Astrophysics

    Energy Technology Data Exchange (ETDEWEB)

    Klein, R I; Stone, J M

    2007-11-20

    We describe numerical methods for solving the equations of radiation magnetohydrodynamics (MHD) for astrophysical fluid flow. Such methods are essential for the investigation of the time-dependent and multidimensional dynamics of a variety of astrophysical systems, although our particular interest is motivated by problems in star formation. Over the past few years, the authors have been members of two parallel code development efforts, and this review reflects that organization. In particular, we discuss numerical methods for MHD as implemented in the Athena code, and numerical methods for radiation hydrodynamics as implemented in the Orion code. We discuss the challenges introduced by the use of adaptive mesh refinement in both codes, as well as the most promising directions for future developments.

  14. Numerical Methods for Radiation Magnetohydrodynamics in Astrophysics

    International Nuclear Information System (INIS)

    Klein, R I; Stone, J M

    2007-01-01

    We describe numerical methods for solving the equations of radiation magnetohydrodynamics (MHD) for astrophysical fluid flow. Such methods are essential for the investigation of the time-dependent and multidimensional dynamics of a variety of astrophysical systems, although our particular interest is motivated by problems in star formation. Over the past few years, the authors have been members of two parallel code development efforts, and this review reflects that organization. In particular, we discuss numerical methods for MHD as implemented in the Athena code, and numerical methods for radiation hydrodynamics as implemented in the Orion code. We discuss the challenges introduced by the use of adaptive mesh refinement in both codes, as well as the most promising directions for future developments

  15. AGN Obscuration Through Dusty Infrared Dominated Flows. 1; Radiation-Hydrodynamics Solution for the Wind

    Science.gov (United States)

    Dorodnitsyn, A.; Bisnovatyi-Kogan. G. S.; Kallman, T.

    2011-01-01

    We construct a radiation-hydrodynamics model for the obscuring toroidal structure in active galactic nuclei. In this model the obscuration is produced at parsec scale by a dense, dusty wind which is supported by infrared radiation pressure on dust grains. To find the distribution of radiation pressure, we numerically solve the 2D radiation transfer problem in a flux limited diffusion approximation. We iteratively couple the solution with calculations of stationary 1D models for the wind, and obtain the z-component of the velocity. Our results demonstrate that for AGN luminosities greater than 0.1 L(sub edd) external illumination can support a geometrically thick obscuration via outflows driven by infrared radiation pressure. The terminal velocity of marginally Compton-thin models (0.2 infrared-driven winds is a viable option for the AGN torus problem and AGN unification models. Such winds can also provide an important channel for AGN feedback.

  16. Peripheral and central mediators of lipopolysaccharide induced suppression of defensive rage behavior in the cat.

    Science.gov (United States)

    Bhatt, S; Bhatt, R S; Zalcman, S S; Siegel, A

    2009-11-10

    Based upon recent findings in our laboratory that cytokines microinjected into the medial hypothalamus or periaqueductal gray (PAG) powerfully modulate defensive rage behavior in cat, the present study determined the effects of peripherally released cytokines following lipopolysaccharide (LPS) challenge upon defensive rage. The study involved initial identification of the effects of peripheral administration of LPS upon defensive rage by electrical stimulation from PAG and subsequent determination of the peripheral and central mechanisms governing this process. The results revealed significant elevation in response latencies for defensive rage from 60 to 300 min, post LPS injection, with no detectable signs of sickness behavior present at 60 min. In contrast, head turning behavior elicited by stimulation of adjoining midbrain sites was not affected by LPS administration, suggesting a specificity of the effects of LPS upon defensive rage. Direct administration of LPS into the medial hypothalamus had no effect on defensive rage, suggesting that the effects of LPS were mediated by peripheral cytokines rather than by any direct actions upon hypothalamic neurons. Complete blockade of the suppressive effects of LPS by peripheral pretreatment with an Anti-tumor necrosis factor-alpha (TNFalpha) antibody but not with an anti- interleukin-1 (IL-1) antibody demonstrated that the effects of LPS were mediated through TNF-alpha rather than through an IL-1 mechanism. A determination of the central mechanisms governing LPS suppression revealed that pretreatment of the medial hypothalamus with PGE(2) or 5-HT(1A) receptor antagonists each completely blocked the suppressive effects of LPS, while microinjections of a TNF-alpha antibody into the medial hypothalamus were ineffective. Microinjections of -Iodo-N-[2-[4-(methoxyphenyl)-1-piperazinyl]ethyl]-N-(2-pyridinyl) benzamide monohydrochloride (p-MPPI) into lateral hypothalamus (to test for anatomical specificity) had no effect upon

  17. Radiation Hydrodynamical Turbulence in Protoplanetary Disks: Numerical Models and Observational Constraints

    Science.gov (United States)

    Flock, Mario; Nelson, Richard P.; Turner, Neal J.; Bertrang, Gesa H.-M.; Carrasco-González, Carlos; Henning, Thomas; Lyra, Wladimir; Teague, Richard

    2017-12-01

    Planets are born in protostellar disks, which are now observed with enough resolution to address questions about internal gas flows. Magnetic forces are possibly drivers of the flows, but ionization state estimates suggest that much of the gas mass decouples from magnetic fields. Thus, hydrodynamical instabilities could play a major role. We investigate disk dynamics under conditions typical for a T Tauri system, using global 3D radiation-hydrodynamics simulations with embedded particles and a resolution of 70 cells per scale height. Stellar irradiation heating is included with realistic dust opacities. The disk starts in joint radiative balance and hydrostatic equilibrium. The vertical shear instability (VSI) develops into turbulence that persists up to at least 1600 inner orbits (143 outer orbits). Turbulent speeds are a few percent of the local sound speed at the midplane, increasing to 20%, or 100 m s-1, in the corona. These are consistent with recent upper limits on turbulent speeds from optically thin and thick molecular line observations of TW Hya and HD 163296. The predominantly vertical motions induced by the VSI efficiently lift particles upward. Grains 0.1 and 1 mm in size achieve scale heights greater than expected in isotropic turbulence. We conclude that while kinematic constraints from molecular line emission do not directly discriminate between magnetic and nonmagnetic disk models, the small dust scale heights measured in HL Tau and HD 163296 favor turbulent magnetic models, which reach lower ratios of the vertical kinetic energy density to the accretion stress.

  18. A Radiation Solver for the National Combustion Code

    Science.gov (United States)

    Sockol, Peter M.

    2015-01-01

    A methodology is given that converts an existing finite volume radiative transfer method that requires input of local absorption coefficients to one that can treat a mixture of combustion gases and compute the coefficients on the fly from the local mixture properties. The Full-spectrum k-distribution method is used to transform the radiative transfer equation (RTE) to an alternate wave number variable, g . The coefficients in the transformed equation are calculated at discrete temperatures and participating species mole fractions that span the values of the problem for each value of g. These results are stored in a table and interpolation is used to find the coefficients at every cell in the field. Finally, the transformed RTE is solved for each g and Gaussian quadrature is used to find the radiant heat flux throughout the field. The present implementation is in an existing cartesian/cylindrical grid radiative transfer code and the local mixture properties are given by a solution of the National Combustion Code (NCC) on the same grid. Based on this work the intention is to apply this method to an existing unstructured grid radiation code which can then be coupled directly to NCC.

  19. Narcissistic rage: The Achilles’ heel of the patient with chronic physical illness

    Directory of Open Access Journals (Sweden)

    Thomas Hyphantis

    2009-08-01

    Full Text Available Thomas Hyphantis1, Augustina Almyroudi1, Vassiliki Paika1, Panagiota Goulia1, Konstantinos Arvanitakis2,31Department of Psychiatry, Medical School, University of Ioannina, Ioannina, Greece; 2Canadian Institute of Psychoanalysis, Mcgill University, Montreal, Canada; 3Departments of Philosophy and Psychiatry, Mcgill University Health Centre, Montreal, CanadaAbstract: Based on the psychoanalytic reading of Homer’s Iliad whose principal theme is “Achilles’ rage” (the semi-mortal hero invulnerable in all of his body except for his heel, hence “Achilles’ heel” has come to mean a person’s principal weakness, we aimed to assess whether “narcissistic rage” has an impact on several psychosocial variables in patients with severe physical illness across time. In 878 patients with cancer, rheumatological diseases, multiple sclerosis, inflammatory bowel disease, and glaucoma, we assessed psychological distress (SCL-90 and GHQ-28, quality of life (WHOQOL-BREF, interpersonal difficulties (IIP-40, hostility (HDHQ, and defense styles (DSQ. Narcissistic rage comprised DSQ “omnipotence” and HDHQ “extraverted hostility”. Hierarchical multiple regressions analyses were performed. We showed that, in patients with disease duration less than one year, narcissistic rage had a minor impact on psychosocial variables studied, indicating that the rage was rather part of a “normal” mourning process. On the contrary, in patients with longer disease duration, increased rates of narcissistic rage had a great impact on all outcome variables, and the opposite was true for patients with low rates of narcissistic rage, indicating that narcissistic rage constitutes actually an “Achilles’ Heel” for patients with long-term physical illness. These findings may have important clinical implications.Keywords: consultation-liaison psychiatry, psychosomatics, narcissism, physical illness, quality of life, psychological distress, personality

  20. Code of practice : safe use of ionizing radiation

    International Nuclear Information System (INIS)

    1988-07-01

    Ionizing radiation is used extensively in the field of scientific research. The risk of uncontrolled exposure to both the worker and the environment is ever present. The purpose of this Code is to set out practices considered by the CSIRO Health and Safety Committee to be appropriate for CSIRO staff and, if followed, they will result in appropriate protection for research staff and the environment. The Code does not cover sources of non-ionizing radiation such as microwave ovens, RF generators and laser sources

  1. SPRAI: coupling of radiative feedback and primordial chemistry in moving mesh hydrodynamics

    Science.gov (United States)

    Jaura, O.; Glover, S. C. O.; Klessen, R. S.; Paardekooper, J.-P.

    2018-04-01

    In this paper, we introduce a new radiative transfer code SPRAI (Simplex Photon Radiation in the Arepo Implementation) based on the SIMPLEX radiation transfer method. This method, originally used only for post-processing, is now directly integrated into the AREPO code and takes advantage of its adaptive unstructured mesh. Radiated photons are transferred from the sources through the series of Voronoi gas cells within a specific solid angle. From the photon attenuation, we derive corresponding photon fluxes and ionization rates and feed them to a primordial chemistry module. This gives us a self-consistent method for studying dynamical and chemical processes caused by ionizing sources in primordial gas. Since the computational cost of the SIMPLEX method does not scale directly with the number of sources, it is convenient for studying systems such as primordial star-forming haloes that may form multiple ionizing sources.

  2. Jet-torus connection in radio galaxies. Relativistic hydrodynamics and synthetic emission

    Science.gov (United States)

    Fromm, C. M.; Perucho, M.; Porth, O.; Younsi, Z.; Ros, E.; Mizuno, Y.; Zensus, J. A.; Rezzolla, L.

    2018-01-01

    Context. High resolution very long baseline interferometry observations of active galactic nuclei have revealed asymmetric structures in the jets of radio galaxies. These asymmetric structures may be due to internal asymmetries in the jets or they may be induced by the different conditions in the surrounding ambient medium, including the obscuring torus, or a combination of the two. Aims: In this paper we investigate the influence of the ambient medium, including the obscuring torus, on the observed properties of jets from radio galaxies. Methods: We performed special-relativistic hydrodynamic (SRHD) simulations of over-pressured and pressure-matched jets using the special-relativistic hydrodynamics code Ratpenat, which is based on a second-order accurate finite-volume method and an approximate Riemann solver. Using a newly developed radiative transfer code to compute the electromagnetic radiation, we modelled several jets embedded in various ambient medium and torus configurations and subsequently computed the non-thermal emission produced by the jet and thermal absorption from the torus. To better compare the emission simulations with observations we produced synthetic radio maps, taking into account the properties of the observatory. Results: The detailed analysis of our simulations shows that the observed properties such as core shift could be used to distinguish between over-pressured and pressure matched jets. In addition to the properties of the jets, insights into the extent and density of the obscuring torus can be obtained from analyses of the single-dish spectrum and spectral index maps.

  3. A NUMERICAL SCHEME FOR SPECIAL RELATIVISTIC RADIATION MAGNETOHYDRODYNAMICS BASED ON SOLVING THE TIME-DEPENDENT RADIATIVE TRANSFER EQUATION

    Energy Technology Data Exchange (ETDEWEB)

    Ohsuga, Ken; Takahashi, Hiroyuki R. [National Astronomical Observatory of Japan, Osawa, Mitaka, Tokyo 181-8588 (Japan)

    2016-02-20

    We develop a numerical scheme for solving the equations of fully special relativistic, radiation magnetohydrodynamics (MHDs), in which the frequency-integrated, time-dependent radiation transfer equation is solved to calculate the specific intensity. The radiation energy density, the radiation flux, and the radiation stress tensor are obtained by the angular quadrature of the intensity. In the present method, conservation of total mass, momentum, and energy of the radiation magnetofluids is guaranteed. We treat not only the isotropic scattering but also the Thomson scattering. The numerical method of MHDs is the same as that of our previous work. The advection terms are explicitly solved, and the source terms, which describe the gas–radiation interaction, are implicitly integrated. Our code is suitable for massive parallel computing. We present that our code shows reasonable results in some numerical tests for propagating radiation and radiation hydrodynamics. Particularly, the correct solution is given even in the optically very thin or moderately thin regimes, and the special relativistic effects are nicely reproduced.

  4. Exact Jacobians of Roe-type flux difference splitting of the equations of radiation hydrodynamics (and Euler equations) for use in time-implicit higher-order Godunov schemes

    International Nuclear Information System (INIS)

    Balsara, D.S.

    1999-01-01

    In this paper we analyze some of the numerical issues that are involved in making time-implicit higher-order Godunov schemes for the equations of radiation hydrodynamics (and the Euler or Navier-Stokes equations). This is done primarily with the intent of incorporating such methods in the author's RIEMANN code. After examining the issues it is shown that the construction of a time-implicit higher-order Godunov scheme for radiation hydrodynamics would be benefited by our ability to evaluate exact Jacobians of the numerical flux that is based on Roe-type flux difference splitting. In this paper we show that this can be done analytically in a form that is suitable for efficient computational implementation. It is also shown that when multiple fluid species are used or when multiple radiation frequencies are used the computational cost in the evaluation of the exact Jacobians scales linearly with the number of fluid species or the number of radiation frequencies. Connections are made to other types of numerical fluxes, especially those based on flux difference splittings. It is shown that the evaluation of the exact Jacobian for such numerical fluxes is also benefited by the present strategy and the results given here. It is, however, pointed out that time-implicit schemes that are based on the evaluation of the exact Jacobians for flux difference splittings using the methods developed here are both computationally more efficient and numerically more stable than corresponding time-implicit schemes that are based on the evaluation of the exact or approximate Jacobians for flux vector splittings. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

  5. Action of an ionizing radiation and hydrodynamic effect on matrix properties of DNA during extracellular synthesis of RNA, and thiophosphate protection of matrix properties of T2-DNA against. gamma. -radiation. [gamma radiation

    Energy Technology Data Exchange (ETDEWEB)

    Shekhtman, Ya L; Domashenko, A D; Kamzolova, S G; Medvedkov, A A [AN SSSR, Pushchino-na-Oke. Inst. Biologicheskoj Fiziki

    1976-05-01

    Action of an ionizing radiation and the hydrodynamic effect of the matrix activity of thymus DNA and T2 phase DNA have been studied in vitro in the RNA: polymerase system of E.coli B. Also studied have been the thiophosphate protection of matrix properties of T2-DNA against ..gamma..-radiation.

  6. Total soluble and endogenous secretory receptor for advanced glycation endproducts (RAGE) in IBD

    NARCIS (Netherlands)

    Meijer, Berrie; Hoskin, Teagan; Ashcroft, Anna; Burgess, Laura; Keenan, Jacqueline I.; Falvey, James; Gearry, Richard B.; Day, Andrew S.

    2014-01-01

    Recruitment and activation of neutrophils, with release of specific proteins such as S100 proteins, is a feature of inflammatory bowel disease (IBD). Soluble forms of the receptor for advanced glycation endproducts (sRAGE), and variants such as endogenous secretory (esRAGE), can act as decoy

  7. The receptor for advanced glycation end products (RAGE contributes to the progression of emphysema in mice.

    Directory of Open Access Journals (Sweden)

    Nisha Sambamurthy

    Full Text Available Several recent clinical studies have implied a role for the receptor for advanced glycation end products (RAGE and its variants in chronic obstructive pulmonary disease (COPD. In this study we have defined a role for RAGE in the pathogenesis of emphysema in mice. RAGE deficient mice (RAGE-/- exposed to chronic cigarette smoke were significantly protected from smoke induced emphysema as determined by airspace enlargement and had no significant reduction in lung tissue elastance when compared to their air exposed controls contrary to their wild type littermates. The progression of emphysema has been largely attributed to an increased inflammatory cell-mediated elastolysis. Acute cigarette smoke exposure in RAGE-/- mice revealed an impaired early recruitment of neutrophils, approximately a 6-fold decrease compared to wild type mice. Hence, impaired neutrophil recruitment with continued cigarette smoke exposure reduces elastolysis and consequent emphysema.

  8. Expression of RAGE and HMGB1 in thymic epithelial tumors, thymic hyperplasia and regular thymic morphology.

    Science.gov (United States)

    Moser, Bernhard; Janik, Stefan; Schiefer, Ana-Iris; Müllauer, Leonhard; Bekos, Christine; Scharrer, Anke; Mildner, Michael; Rényi-Vámos, Ferenc; Klepetko, Walter; Ankersmit, Hendrik Jan

    2014-01-01

    Recently, a role of the receptor for advanced glycation endproducts (RAGE) in myasthenia gravis was described. RAGE and its ligand high mobility group box 1 (HMGB1) play key roles in autoimmunity and cancer. To test whether these molecules are involved in patients with thymic abnormalities we applied immunohistochemical analysis in 33 cases of thymic epithelial tumors, comprising 27 thymomas and 6 thymic carcinomas, and 21 nonneoplastic thymuses. Both molecules were detected in neoplastic epithelial cells: RAGE staining was most intense in WHO type B2 thymomas and thymic carcinomas (pB3>thymic carcinoma (pepithelial cells which was found in 50% of myasthenic patients. Furthermore RAGE and HMGB1 were expressed in thymocytes, macrophages, Hassall's corpuscles, thymic medulla, and germinal center cells in myasthenic patients. Immunohistochemistry results were complemented by systemic measurements (immunosorbent assay): serum levels of soluble RAGE were significantly reduced in patients with epithelial tumors (p = 0.008); and in invasive tumors (p = 0.008). Whereas RAGE was equally reduced in thymic hyperplasia and epithelial tumors (p = 0.003), HMGB1 was only elevated in malignancies (p = 0.036). Results were most pronounced in thymic carcinomas. Thus, RAGE and HMGB1 are involved in the (patho-)physiology of thymus, as evidenced by differentiated thymic and systemic expression patterns that may act as diagnostic or therapeutic targets in autoimmune disease and cancer.

  9. Nuclear DAMP complex-mediated RAGE-dependent macrophage cell death

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Ruochan [Department of Surgery, University of Pittsburgh, Pittsburgh, PA 15213 (United States); Department of Infectious Diseases and State Key Lab of Viral Hepatitis, Xiangya Hospital, Central South University, Changsha, Hunan 410008 (China); Fu, Sha; Fan, Xue-Gong [Department of Infectious Diseases and State Key Lab of Viral Hepatitis, Xiangya Hospital, Central South University, Changsha, Hunan 410008 (China); Lotze, Michael T.; Zeh, Herbert J. [Department of Surgery, University of Pittsburgh, Pittsburgh, PA 15213 (United States); Tang, Daolin, E-mail: tangd2@upmc.edu [Department of Surgery, University of Pittsburgh, Pittsburgh, PA 15213 (United States); Kang, Rui, E-mail: kangr@upmc.edu [Department of Surgery, University of Pittsburgh, Pittsburgh, PA 15213 (United States)

    2015-03-13

    High mobility group box 1 (HMGB1), histone, and DNA are essential nuclear components involved in the regulation of chromosome structure and function. In addition to their nuclear function, these molecules act as damage-associated molecular patterns (DAMPs) alone or together when released extracellularly. The synergistic effect of these nuclear DNA-HMGB1-histone complexes as DAMP complexes (nDCs) on immune cells remains largely unexplored. Here, we demonstrate that nDCs limit survival of macrophages (e.g., RAW264.7 and peritoneal macrophages) but not cancer cells (e.g., HCT116, HepG2 and Hepa1-6). nDCs promote production of inflammatory tumor necrosis factor α (TNFα) release, triggering reactive oxygen species-dependent apoptosis and necrosis. Moreover, the receptor for advanced glycation end products (RAGE), but not toll-like receptor (TLR)-4 and TLR-2, was required for Akt-dependent TNFα release and subsequent cell death following treatment with nDCs. Genetic depletion of RAGE by RNAi, antioxidant N-Acetyl-L-cysteine, and TNFα neutralizing antibody significantly attenuated nDC-induced cell death. These findings provide evidence supporting novel signaling mechanisms linking nDCs and inflammation in macrophage cell death. - Highlights: • Nuclear DAMP complexes (nDCs) selectively induce cell death in macrophages, but not cancer cells. • TNFα-mediated oxidative stress is required for nDC-induced death. • RAGE-mediated Akt activation is required for nDC-induced TNFα release. • Blocking RAGE and TNFα inhibits nDC-induced macrophage cell death.

  10. Expression of RAGE and HMGB1 in thymic epithelial tumors, thymic hyperplasia and regular thymic morphology.

    Directory of Open Access Journals (Sweden)

    Bernhard Moser

    Full Text Available Recently, a role of the receptor for advanced glycation endproducts (RAGE in myasthenia gravis was described. RAGE and its ligand high mobility group box 1 (HMGB1 play key roles in autoimmunity and cancer. To test whether these molecules are involved in patients with thymic abnormalities we applied immunohistochemical analysis in 33 cases of thymic epithelial tumors, comprising 27 thymomas and 6 thymic carcinomas, and 21 nonneoplastic thymuses. Both molecules were detected in neoplastic epithelial cells: RAGE staining was most intense in WHO type B2 thymomas and thymic carcinomas (pB3>thymic carcinoma (p<0.001. Conversely, HMGB1 cytoplasmic staining intensities were as follows: A and AB (none, B1 (strong, B2 (moderate, B3 and thymic carcinoma (weak; (p<0.001. Fetal thymic tissue showed a distinct expression of RAGE and HMGB1 in subcapsular cortical epithelial cells which was found in 50% of myasthenic patients. Furthermore RAGE and HMGB1 were expressed in thymocytes, macrophages, Hassall's corpuscles, thymic medulla, and germinal center cells in myasthenic patients. Immunohistochemistry results were complemented by systemic measurements (immunosorbent assay: serum levels of soluble RAGE were significantly reduced in patients with epithelial tumors (p = 0.008; and in invasive tumors (p = 0.008. Whereas RAGE was equally reduced in thymic hyperplasia and epithelial tumors (p = 0.003, HMGB1 was only elevated in malignancies (p = 0.036. Results were most pronounced in thymic carcinomas. Thus, RAGE and HMGB1 are involved in the (patho-physiology of thymus, as evidenced by differentiated thymic and systemic expression patterns that may act as diagnostic or therapeutic targets in autoimmune disease and cancer.

  11. Code of Nursing Practice for Staff Exposed to Ionizing Radiation (1984)

    International Nuclear Information System (INIS)

    1984-01-01

    This Code, published by the National Health and Medical Research Council and intended for nurses and auxiliary staff provides general guidance on radiation protection. The Code is supplementary to radiation control legislation relating to the use of ionizing radiation in medical practice. The principles established by the recommendations of the International Commission on Radiological Protection (ICRP) have been taken into account. (NEA) [fr

  12. Modeling NIF experimental designs with adaptive mesh refinement and Lagrangian hydrodynamics

    Science.gov (United States)

    Koniges, A. E.; Anderson, R. W.; Wang, P.; Gunney, B. T. N.; Becker, R.; Eder, D. C.; MacGowan, B. J.; Schneider, M. B.

    2006-06-01

    Incorporation of adaptive mesh refinement (AMR) into Lagrangian hydrodynamics algorithms allows for the creation of a highly powerful simulation tool effective for complex target designs with three-dimensional structure. We are developing an advanced modeling tool that includes AMR and traditional arbitrary Lagrangian-Eulerian (ALE) techniques. Our goal is the accurate prediction of vaporization, disintegration and fragmentation in National Ignition Facility (NIF) experimental target elements. Although our focus is on minimizing the generation of shrapnel in target designs and protecting the optics, the general techniques are applicable to modern advanced targets that include three-dimensional effects such as those associated with capsule fill tubes. Several essential computations in ordinary radiation hydrodynamics need to be redesigned in order to allow for AMR to work well with ALE, including algorithms associated with radiation transport. Additionally, for our goal of predicting fragmentation, we include elastic/plastic flow into our computations. We discuss the integration of these effects into a new ALE-AMR simulation code. Applications of this newly developed modeling tool as well as traditional ALE simulations in two and three dimensions are applied to NIF early-light target designs.

  13. Modeling NIF Experimental Designs with Adaptive Mesh Refinement and Lagrangian Hydrodynamics

    International Nuclear Information System (INIS)

    Koniges, A E; Anderson, R W; Wang, P; Gunney, B N; Becker, R; Eder, D C; MacGowan, B J

    2005-01-01

    Incorporation of adaptive mesh refinement (AMR) into Lagrangian hydrodynamics algorithms allows for the creation of a highly powerful simulation tool effective for complex target designs with three-dimensional structure. We are developing an advanced modeling tool that includes AMR and traditional arbitrary Lagrangian-Eulerian (ALE) techniques. Our goal is the accurate prediction of vaporization, disintegration and fragmentation in National Ignition Facility (NIF) experimental target elements. Although our focus is on minimizing the generation of shrapnel in target designs and protecting the optics, the general techniques are applicable to modern advanced targets that include three-dimensional effects such as those associated with capsule fill tubes. Several essential computations in ordinary radiation hydrodynamics need to be redesigned in order to allow for AMR to work well with ALE, including algorithms associated with radiation transport. Additionally, for our goal of predicting fragmentation, we include elastic/plastic flow into our computations. We discuss the integration of these effects into a new ALE-AMR simulation code. Applications of this newly developed modeling tool as well as traditional ALE simulations in two and three dimensions are applied to NIF early-light target designs

  14. Modeling Nif experimental designs with adaptive mesh refinement and Lagrangian hydrodynamics

    International Nuclear Information System (INIS)

    Koniges, A.E.; Anderson, R.W.; Wang, P.; Gunney, B.T.N.; Becker, R.; Eder, D.C.; MacGowan, B.J.; Schneider, M.B.

    2006-01-01

    Incorporation of adaptive mesh refinement (AMR) into Lagrangian hydrodynamics algorithms allows for the creation of a highly powerful simulation tool effective for complex target designs with three-dimensional structure. We are developing an advanced modeling tool that includes AMR and traditional arbitrary Lagrangian-Eulerian (ALE) techniques. Our goal is the accurate prediction of vaporization, disintegration and fragmentation in National Ignition Facility (NIF) experimental target elements. Although our focus is on minimizing the generation of shrapnel in target designs and protecting the optics, the general techniques are applicable to modern advanced targets that include three-dimensional effects such as those associated with capsule fill tubes. Several essential computations in ordinary radiation hydrodynamics need to be redesigned in order to allow for AMR to work well with ALE, including algorithms associated with radiation transport. Additionally, for our goal of predicting fragmentation, we include elastic/plastic flow into our computations. We discuss the integration of these effects into a new ALE-AMR simulation code. Applications of this newly developed modeling tool as well as traditional ALE simulations in two and three dimensions are applied to NIF early-light target designs. (authors)

  15. A NEW MULTI-DIMENSIONAL GENERAL RELATIVISTIC NEUTRINO HYDRODYNAMICS CODE FOR CORE-COLLAPSE SUPERNOVAE. II. RELATIVISTIC EXPLOSION MODELS OF CORE-COLLAPSE SUPERNOVAE

    Energy Technology Data Exchange (ETDEWEB)

    Mueller, Bernhard; Janka, Hans-Thomas; Marek, Andreas, E-mail: bjmuellr@mpa-garching.mpg.de, E-mail: thj@mpa-garching.mpg.de [Max-Planck-Institut fuer Astrophysik, Karl-Schwarzschild-Str. 1, D-85748 Garching (Germany)

    2012-09-01

    We present the first two-dimensional general relativistic (GR) simulations of stellar core collapse and explosion with the COCONUT hydrodynamics code in combination with the VERTEX solver for energy-dependent, three-flavor neutrino transport, using the extended conformal flatness condition for approximating the space-time metric and a ray-by-ray-plus ansatz to tackle the multi-dimensionality of the transport. For both of the investigated 11.2 and 15 M{sub Sun} progenitors we obtain successful, though seemingly marginal, neutrino-driven supernova explosions. This outcome and the time evolution of the models basically agree with results previously obtained with the PROMETHEUS hydro solver including an approximative treatment of relativistic effects by a modified Newtonian potential. However, GR models exhibit subtle differences in the neutrinospheric conditions compared with Newtonian and pseudo-Newtonian simulations. These differences lead to significantly higher luminosities and mean energies of the radiated electron neutrinos and antineutrinos and therefore to larger energy-deposition rates and heating efficiencies in the gain layer with favorable consequences for strong nonradial mass motions and ultimately for an explosion. Moreover, energy transfer to the stellar medium around the neutrinospheres through nucleon recoil in scattering reactions of heavy-lepton neutrinos also enhances the mentioned effects. Together with previous pseudo-Newtonian models, the presented relativistic calculations suggest that the treatment of gravity and energy-exchanging neutrino interactions can make differences of even 50%-100% in some quantities and is likely to contribute to a finally successful explosion mechanism on no minor level than hydrodynamical differences between different dimensions.

  16. Radiative transfer with scattering for domain-decomposed 3D MHD simulations of cool stellar atmospheres : numerical methods and application to the quiet, non-magnetic, surface of a solar-type star

    NARCIS (Netherlands)

    Hayek, W.; Asplund, M.; Carlsson, M.; Trampedach, R.; Collet, R.; Gudiksen, B.V.; Hansteen, V.H.; Leenaarts, J.|info:eu-repo/dai/nl/304837946

    2010-01-01

    Aims. We present the implementation of a radiative transfer solver with coherent scattering in the new BIFROST code for radiative magneto-hydrodynamical (MHD) simulations of stellar surface convection. The code is fully parallelized using MPI domain decomposition, which allows for large grid sizes

  17. Counterpropagating Radiative Shock Experiments on the Orion Laser.

    Science.gov (United States)

    Suzuki-Vidal, F; Clayson, T; Stehlé, C; Swadling, G F; Foster, J M; Skidmore, J; Graham, P; Burdiak, G C; Lebedev, S V; Chaulagain, U; Singh, R L; Gumbrell, E T; Patankar, S; Spindloe, C; Larour, J; Kozlova, M; Rodriguez, R; Gil, J M; Espinosa, G; Velarde, P; Danson, C

    2017-08-04

    We present new experiments to study the formation of radiative shocks and the interaction between two counterpropagating radiative shocks. The experiments are performed at the Orion laser facility, which is used to drive shocks in xenon inside large aspect ratio gas cells. The collision between the two shocks and their respective radiative precursors, combined with the formation of inherently three-dimensional shocks, provides a novel platform particularly suited for the benchmarking of numerical codes. The dynamics of the shocks before and after the collision are investigated using point-projection x-ray backlighting while, simultaneously, the electron density in the radiative precursor was measured via optical laser interferometry. Modeling of the experiments using the 2D radiation hydrodynamic codes nym and petra shows very good agreement with the experimental results.

  18. Hydrodynamics of embedded planets' first atmospheres - III. The role of radiation transport for super-Earth planets

    Science.gov (United States)

    Cimerman, Nicolas P.; Kuiper, Rolf; Ormel, Chris W.

    2017-11-01

    The population of close-in super-Earths, with gas mass fractions of up to 10 per cent represents a challenge for planet formation theory: how did they avoid runaway gas accretion and collapsing to hot Jupiters despite their core masses being in the critical range of Mc ≃ 10 M⊕? Previous three-dimensional (3D) hydrodynamical simulations indicate that atmospheres of low-mass planets cannot be considered isolated from the protoplanetary disc, contrary to what is assumed in 1D-evolutionary calculations. This finding is referred to as the recycling hypothesis. In this paper, we investigate the recycling hypothesis for super-Earth planets, accounting for realistic 3D radiation hydrodynamics. Also, we conduct a direct comparison in terms of the evolution of the entropy between 1D and 3D geometries. We clearly see that 3D atmospheres maintain higher entropy: although gas in the atmosphere loses entropy through radiative cooling, the advection of high-entropy gas from the disc into the Bondi/Hill sphere slows down Kelvin-Helmholtz contraction, potentially arresting envelope growth at a sub-critical gas mass fraction. Recycling, therefore, operates vigorously, in line with results by previous studies. However, we also identify an `inner core' - in size ≈25 per cent of the Bondi radius - where streamlines are more circular and entropies are much lower than in the outer atmosphere. Future studies at higher resolutions are needed to assess whether this region can become hydrodynamically isolated on long time-scales.

  19. Code of practice for conducting radiation work at PINSTECH (revised 1992)

    International Nuclear Information System (INIS)

    Aslam, M.; Atta, M.A.; Orfi, S.D.

    1992-02-01

    The primary objective of this code is to achieve standard of radiation protection and safety set by Pakistan Nuclear Safety and Radiation Protection (PNSRP) ordinance 1984 and PNSRP regulations 1990. Secondary objective remains to make all best efforts to implement latest ICRP recommendations. The revised code of practice sets forth the objective of adequate system radiological safety of radiation workers, environment and general public. The code provides the guidance to persons and authorities who are responsible for the protection of workers and those who are concerned with the planning and management of personnel monitoring services. The procedures set forth in the code are mandatory and in no case should any of them be deviated under normal conditions. All those supervising and performing any kind of radiation work are required to study and adhere to those procedures and shell make all possible efforts to keep the exposure as low as reasonably achievable (ALARA), social and economic factor being taken into account. (author)

  20. Permanent phonetic identification code for radiation workers

    International Nuclear Information System (INIS)

    Khatua, R.; Somasundaram, S.; Srivastava, D.N.

    1987-01-01

    This report describes a system of self-checking short and easily memorisable 4-digit 'Permanent Phonetic Radiation Code' (PPRC) using radix 128 for Indians occupationally exposed to radiation, to facilitate entry of all radiation dose data pertaining to an individual in a single record of a file. The logic of PPRC is computer compatible. The necessary computer program has been developed in Health Physics Division for printing the PPRCs in Devanagari script through dot-matrix printers for making it understandable to the majority of the persons concerned. (author)

  1. Ethical codes. Fig leaf argument, ballast or cultural element for radiation protection?

    International Nuclear Information System (INIS)

    Gellermann, Rainer

    2014-01-01

    The international association for radiation protection (IRPA) adopted in May 2004 a Code of Ethics in order to allow their members to hold an adequate professional level of ethical line of action. Based on this code of ethics the professional body of radiation protection (Fachverband fuer Strahlenschutz) has developed its own ethical code and adopted in 2005.

  2. Coupling Hydrodynamic and Wave Propagation Codes for Modeling of Seismic Waves recorded at the SPE Test.

    Science.gov (United States)

    Larmat, C. S.; Rougier, E.; Delorey, A.; Steedman, D. W.; Bradley, C. R.

    2016-12-01

    The goal of the Source Physics Experiment (SPE) is to bring empirical and theoretical advances to the problem of detection and identification of underground nuclear explosions. For this, the SPE program includes a strong modeling effort based on first principles calculations with the challenge to capture both the source and near-source processes and those taking place later in time as seismic waves propagate within complex 3D geologic environments. In this paper, we report on results of modeling that uses hydrodynamic simulation codes (Abaqus and CASH) coupled with a 3D full waveform propagation code, SPECFEM3D. For modeling the near source region, we employ a fully-coupled Euler-Lagrange (CEL) modeling capability with a new continuum-based visco-plastic fracture model for simulation of damage processes, called AZ_Frac. These capabilities produce high-fidelity models of various factors believed to be key in the generation of seismic waves: the explosion dynamics, a weak grout-filled borehole, the surrounding jointed rock, and damage creation and deformations happening around the source and the free surface. SPECFEM3D, based on the Spectral Element Method (SEM) is a direct numerical method for full wave modeling with mathematical accuracy. The coupling interface consists of a series of grid points of the SEM mesh situated inside of the hydrodynamic code's domain. Displacement time series at these points are computed using output data from CASH or Abaqus (by interpolation if needed) and fed into the time marching scheme of SPECFEM3D. We will present validation tests with the Sharpe's model and comparisons of waveforms modeled with Rg waves (2-8Hz) that were recorded up to 2 km for SPE. We especially show effects of the local topography, velocity structure and spallation. Our models predict smaller amplitudes of Rg waves for the first five SPE shots compared to pure elastic models such as Denny &Johnson (1991).

  3. An Ultra-High Field Study of Cerebellar Pathology in Early Relapsing-Remitting Multiple Sclerosis Using MP2RAGE.

    Science.gov (United States)

    Fartaria, Mário João; OʼBrien, Kieran; Şorega, Alexandra; Bonnier, Guillaume; Roche, Alexis; Falkovskiy, Pavel; Krueger, Gunnar; Kober, Tobias; Bach Cuadra, Meritxell; Granziera, Cristina

    2017-05-01

    The aim of this study was to study focal cerebellar pathology in early stages of multiple sclerosis (MS) using ultra-high-field magnetization-prepared 2 inversion-contrast rapid gradient-echo (7T MP2RAGE). Twenty early-stage relapsing-remitting MS patients underwent an MP2RAGE acquisition at 7 T magnetic resonance imaging (MRI) (images acquired at 2 different resolutions: 0.58 × 0.58 × 0.58 mm, 7T_0.58, and 0.75 × 0.75 × 0.90 mm, 7T_0.75) and 3 T MRI (1.0 × 1.0 × 1.2 mm, 3T_1.0). Total cerebellar lesion load and volume and mean cerebellar lesion volume were compared across images using a Wilcoxon signed-rank test. Mean T1 relaxation times in lesions and normal-appearing tissue as well as contrast-to-noise ratio (CNR) measurements were also compared using a Wilcoxon signed-rank test. A multivariate analysis was applied to assess the contribution of MRI metrics to clinical performance in MS patients. Both 7T_0.58 and 7T_0.75 MP2RAGE showed significantly higher lesion load compared with 3T_1.0 MP2RAGE (P < 0.001). Plaques that were judged as leukocortical in 7T_0.75 and 3T_1.0 MP2RAGEs were instead identified as WM lesions in 7T_0.58 MP2RAGE. Cortical lesion CNR was significantly higher in MP2RAGEs at 7 T than at 3 T. Total lesion load as well as total and mean lesion volume obtained at both 7 T and 3 T MP2RAGE significantly predicted attention (P < 0.05, adjusted R = 0.5), verbal fluency (P < 0.01, adjusted R = 0.6), and motor performance (P = 0.01, adjusted R = 0.7). This study demonstrates the value of 7 T MP2RAGE to study the cerebellum in early MS patients. 7T_0.58 MP2RAGE provides a more accurate anatomical description of white and gray matter pathology compared with 7T_0.75 and 3T_1.0 MP2RAGE, likely due to the improved spatial resolution, lower partial volume effects, and higher CNR.

  4. A Multigroup diffusion Solver Using Pseudo Transient Continuation for a Radiaiton-Hydrodynamic Code with Patch-Based AMR

    Energy Technology Data Exchange (ETDEWEB)

    Shestakov, A I; Offner, S R

    2007-03-02

    We present a scheme to solve the nonlinear multigroup radiation diffusion (MGD) equations. The method is incorporated into a massively parallel, multidimensional, Eulerian radiation-hydrodynamic code with adaptive mesh refinement (AMR). The patch-based AMR algorithm refines in both space and time creating a hierarchy of levels, coarsest to finest. The physics modules are time-advanced using operator splitting. On each level, separate 'level-solve' packages advance the modules. Our multigroup level-solve adapts an implicit procedure which leads to a two-step iterative scheme that alternates between elliptic solves for each group with intra-cell group coupling. For robustness, we introduce pseudo transient continuation ({Psi}tc). We analyze the magnitude of the {Psi}tc parameter to ensure positivity of the resulting linear system, diagonal dominance and convergence of the two-step scheme. For AMR, a level defines a subdomain for refinement. For diffusive processes such as MGD, the refined level uses Dirichet boundary data at the coarse-fine interface and the data is derived from the coarse level solution. After advancing on the fine level, an additional procedure, the sync-solve (SS), is required in order to enforce conservation. The MGD SS reduces to an elliptic solve on a combined grid for a system of G equations, where G is the number of groups. We adapt the 'partial temperature' scheme for the SS; hence, we reuse the infrastructure developed for scalar equations. Results are presented. We consider a multigroup test problem with a known analytic solution. We demonstrate utility of {Psi}tc by running with increasingly larger timesteps. Lastly, we simulate the sudden release of energy Y inside an Al sphere (r = 15 cm) suspended in air at STP. For Y = 11 kT, we find that gray radiation diffusion and MGD produce similar results. However, if Y = 1 MT, the two packages yield different results. Our large Y simulation contradicts a long-standing theory

  5. Receptor for advanced glycation end products (RAGE) functions as receptor for specific sulfated glycosaminoglycans, and anti-RAGE antibody or sulfated glycosaminoglycans delivered in vivo inhibit pulmonary metastasis of tumor cells.

    Science.gov (United States)

    Mizumoto, Shuji; Takahashi, Jun; Sugahara, Kazuyuki

    2012-06-01

    Altered expression of chondroitin sulfate (CS) and heparan sulfate (HS) at the surfaces of tumor cells plays a key role in malignant transformation and tumor metastasis. Previously we demonstrated that a Lewis lung carcinoma (LLC)-derived tumor cell line with high metastatic potential had a higher proportion of E-disaccharide units, GlcUA-GalNAc(4,6-O-disulfate), in CS chains than low metastatic LLC cells and that such CS chains are involved in the metastatic process. The metastasis was markedly inhibited by the pre-administration of CS-E from squid cartilage rich in E units or by preincubation with a phage display antibody specific for CS-E. However, the molecular mechanism of the inhibition remains to be investigated. In this study the receptor molecule for CS chains containing E-disaccharides expressed on LLC cells was revealed to be receptor for advanced glycation end products (RAGE), which is a member of the immunoglobulin superfamily predominantly expressed in the lung. Interestingly, RAGE bound strongly to not only E-disaccharide, but also HS-expressing LLC cells. Furthermore, the colonization of the lungs by LLC cells was effectively inhibited by the blocking of CS or HS chains at the tumor cell surface with an anti-RAGE antibody through intravenous injections in a dose-dependent manner. These results provide the clear evidence that RAGE is at least one of the critical receptors for CS and HS chains expressed at the tumor cell surface and involved in experimental lung metastasis and that CS/HS and RAGE are potential molecular targets in the treatment of pulmonary metastasis.

  6. RAGE and TGF-β1 Cross-Talk Regulate Extracellular Matrix Turnover and Cytokine Synthesis in AGEs Exposed Fibroblast Cells.

    Directory of Open Access Journals (Sweden)

    Andreea Iren Serban

    Full Text Available AGEs accumulation in the skin affects extracellular matrix (ECM turnover and triggers diabetes associated skin conditions and accelerated skin aging. The receptor of AGEs (RAGE has an essential contribution to cellular dysfunction driven by chronic inflammatory responses while TGF-β1 is critical in both dermal homeostasis and inflammation. We investigated the contribution of RAGE and TGF-β1 to the modulation of inflammatory response and ECM turnover in AGEs milieu, using a normal fibroblast cell line. RAGE, TGF-β1, collagen I and III gene and protein expression were upregulated after exposure to AGEs-BSA, and MMP-2 was activated. AGEs-RAGE was pivotal in NF-κB dependent collagen I expression and joined with TGF-β1 to stimulate collagen III expression, probably via ERK1/2 signaling. AGEs-RAGE axis induced upregulation of TGF-β1, TNF-α and IL-8 cytokines. TNF-α and IL-8 were subjected to TGF-β1 negative regulation. RAGE's proinflammatory signaling also antagonized AGEs-TGF-β1 induced fibroblast contraction, suggesting the existence of an inhibitory cross-talk mechanism between TGF-β1 and RAGE signaling. RAGE and TGF-β1 stimulated anti-inflammatory cytokines IL-2 and IL-4 expression. GM-CSF and IL-6 expression appeared to be dependent only on TGF-β1 signaling. Our data also indicated that IFN-γ upregulated in AGEs-BSA milieu in a RAGE and TGF-β1 independent mechanism. Our findings raise the possibility that RAGE and TGF-β1 are both involved in fibrosis development in a complex cross-talk mechanism, while also acting on their own individual targets. This study contributes to the understanding of impaired wound healing associated with diabetes complications.

  7. The computer code system for reactor radiation shielding in design of nuclear power plant

    International Nuclear Information System (INIS)

    Li Chunhuai; Fu Shouxin; Liu Guilian

    1995-01-01

    The computer code system used in reactor radiation shielding design of nuclear power plant includes the source term codes, discrete ordinate transport codes, Monte Carlo and Albedo Monte Carlo codes, kernel integration codes, optimization code, temperature field code, skyshine code, coupling calculation codes and some processing codes for data libraries. This computer code system has more satisfactory variety of codes and complete sets of data library. It is widely used in reactor radiation shielding design and safety analysis of nuclear power plant and other nuclear facilities

  8. Acceleration of a Monte Carlo radiation transport code

    International Nuclear Information System (INIS)

    Hochstedler, R.D.; Smith, L.M.

    1996-01-01

    Execution time for the Integrated TIGER Series (ITS) Monte Carlo radiation transport code has been reduced by careful re-coding of computationally intensive subroutines. Three test cases for the TIGER (1-D slab geometry), CYLTRAN (2-D cylindrical geometry), and ACCEPT (3-D arbitrary geometry) codes were identified and used to benchmark and profile program execution. Based upon these results, sixteen top time-consuming subroutines were examined and nine of them modified to accelerate computations with equivalent numerical output to the original. The results obtained via this study indicate that speedup factors of 1.90 for the TIGER code, 1.67 for the CYLTRAN code, and 1.11 for the ACCEPT code are achievable. copyright 1996 American Institute of Physics

  9. Effect of Second-Order Hydrodynamics on a Floating Offshore Wind Turbine

    Energy Technology Data Exchange (ETDEWEB)

    Roald, L.; Jonkman, J.; Robertson, A.

    2014-05-01

    The design of offshore floating wind turbines uses design codes that can simulate the entire coupled system behavior. At the present, most codes include only first-order hydrodynamics, which induce forces and motions varying with the same frequency as the incident waves. Effects due to second- and higher-order hydrodynamics are often ignored in the offshore industry, because the forces induced typically are smaller than the first-order forces. In this report, first- and second-order hydrodynamic analysis used in the offshore oil and gas industry is applied to two different wind turbine concepts--a spar and a tension leg platform.

  10. A multimodal RAGE-specific inhibitor reduces amyloid β–mediated brain disorder in a mouse model of Alzheimer disease

    Science.gov (United States)

    Deane, Rashid; Singh, Itender; Sagare, Abhay P.; Bell, Robert D.; Ross, Nathan T.; LaRue, Barbra; Love, Rachal; Perry, Sheldon; Paquette, Nicole; Deane, Richard J.; Thiyagarajan, Meenakshisundaram; Zarcone, Troy; Fritz, Gunter; Friedman, Alan E.; Miller, Benjamin L.; Zlokovic, Berislav V.

    2012-01-01

    In Alzheimer disease (AD), amyloid β peptide (Aβ) accumulates in plaques in the brain. Receptor for advanced glycation end products (RAGE) mediates Aβ-induced perturbations in cerebral vessels, neurons, and microglia in AD. Here, we identified a high-affinity RAGE-specific inhibitor (FPS-ZM1) that blocked Aβ binding to the V domain of RAGE and inhibited Aβ40- and Aβ42-induced cellular stress in RAGE-expressing cells in vitro and in the mouse brain in vivo. FPS-ZM1 was nontoxic to mice and readily crossed the blood-brain barrier (BBB). In aged APPsw/0 mice overexpressing human Aβ-precursor protein, a transgenic mouse model of AD with established Aβ pathology, FPS-ZM1 inhibited RAGE-mediated influx of circulating Aβ40 and Aβ42 into the brain. In brain, FPS-ZM1 bound exclusively to RAGE, which inhibited β-secretase activity and Aβ production and suppressed microglia activation and the neuroinflammatory response. Blockade of RAGE actions at the BBB and in the brain reduced Aβ40 and Aβ42 levels in brain markedly and normalized cognitive performance and cerebral blood flow responses in aged APPsw/0 mice. Our data suggest that FPS-ZM1 is a potent multimodal RAGE blocker that effectively controls progression of Aβ-mediated brain disorder and that it may have the potential to be a disease-modifying agent for AD. PMID:22406537

  11. grmonty: A MONTE CARLO CODE FOR RELATIVISTIC RADIATIVE TRANSPORT

    International Nuclear Information System (INIS)

    Dolence, Joshua C.; Gammie, Charles F.; Leung, Po Kin; Moscibrodzka, Monika

    2009-01-01

    We describe a Monte Carlo radiative transport code intended for calculating spectra of hot, optically thin plasmas in full general relativity. The version we describe here is designed to model hot accretion flows in the Kerr metric and therefore incorporates synchrotron emission and absorption, and Compton scattering. The code can be readily generalized, however, to account for other radiative processes and an arbitrary spacetime. We describe a suite of test problems, and demonstrate the expected N -1/2 convergence rate, where N is the number of Monte Carlo samples. Finally, we illustrate the capabilities of the code with a model calculation, a spectrum of the slowly accreting black hole Sgr A* based on data provided by a numerical general relativistic MHD model of the accreting plasma.

  12. Code of practice of radiation protection in fixed nuclear gauges

    International Nuclear Information System (INIS)

    Eltayeb, M. A. M.

    2012-09-01

    The present work aims at developing and updating a code of practice of radiation protection in fixed nuclear gauges that comply with current international recommendations. The work also intended to evaluate the current radiation protection situation in two selected companies using nuclear gauges in Sudan. A draft of the code is proposed which includes the basic principle of protection such as source construction and gauges radiation monitoring, storage maintenance and leak testing as well as specific issues related to nuclear gauges. The practical part of this study included investigation of radiation protection in the comparisons using nuclear gauges for level detection, to evaluate the level of radiation protection and the compliance to the regulatory authority regulations. The result revealed that the two companies do not have an effective radiation protection program and that can lead to exposure of workers to unnecessary doses. Some recommendations were stated, if implemented they could improve the status of radiation protection in those companies. (Author)

  13. Code of practice for radiation protection in nuclear medicine

    International Nuclear Information System (INIS)

    Hamed, M. I.

    2010-05-01

    In aim of this study was to develop a draft for a new code practice for radiation protection in nuclear medicine that meets the current relevant international recommendation. The draft includes the following main fields: methods of radiation protection for workers, patients and public. Also, the principles of safe design of nuclear medicine departments, quality assurance program, proper manipulation of radiation sources including radioactive waste and emergency preparedness and response. The practical part of this study includes inspections of three nuclear medicine departments available in Sudan so as to assess the degree of compliance of those departments with what is stated in this code. The inspection missions have been conducted using a checklist that addresses all items that may affect radiation raincoat issues in addition to per formin area radiation monitoring around the installation of the radioactive sources. The results of this revealed that most of the departments do not have effective radiation protection program which in turn could lead to unnecessary exposure to patients, public and workers. Finally, some recommendations are given that - if implemented - could improve the status of radiation protection in nuclear medicine department. (Author)

  14. CRKSPH: A new meshfree hydrodynamics method with applications to astrophysics

    Science.gov (United States)

    Owen, John Michael; Raskin, Cody; Frontiere, Nicholas

    2018-01-01

    The study of astrophysical phenomena such as supernovae, accretion disks, galaxy formation, and large-scale structure formation requires computational modeling of, at a minimum, hydrodynamics and gravity. Developing numerical methods appropriate for these kinds of problems requires a number of properties: shock-capturing hydrodynamics benefits from rigorous conservation of invariants such as total energy, linear momentum, and mass; lack of obvious symmetries or a simplified spatial geometry to exploit necessitate 3D methods that ideally are Galilean invariant; the dynamic range of mass and spatial scales that need to be resolved can span many orders of magnitude, requiring methods that are highly adaptable in their space and time resolution. We have developed a new Lagrangian meshfree hydrodynamics method called Conservative Reproducing Kernel Smoothed Particle Hydrodynamics, or CRKSPH, in order to meet these goals. CRKSPH is a conservative generalization of the meshfree reproducing kernel method, combining the high-order accuracy of reproducing kernels with the explicit conservation of mass, linear momentum, and energy necessary to study shock-driven hydrodynamics in compressible fluids. CRKSPH's Lagrangian, particle-like nature makes it simple to combine with well-known N-body methods for modeling gravitation, similar to the older Smoothed Particle Hydrodynamics (SPH) method. Indeed, CRKSPH can be substituted for SPH in existing SPH codes due to these similarities. In comparison to SPH, CRKSPH is able to achieve substantially higher accuracy for a given number of points due to the explicitly consistent (and higher-order) interpolation theory of reproducing kernels, while maintaining the same conservation principles (and therefore applicability) as SPH. There are currently two coded implementations of CRKSPH available: one in the open-source research code Spheral, and the other in the high-performance cosmological code HACC. Using these codes we have applied

  15. Persistent Increase in Microglial RAGE Contributes to Chronic Stress-Induced Priming of Depressive-like Behavior.

    Science.gov (United States)

    Franklin, Tina C; Wohleb, Eric S; Zhang, Yi; Fogaça, Manoela; Hare, Brendan; Duman, Ronald S

    2018-01-01

    Chronic stress-induced inflammatory responses occur in part via danger-associated molecular pattern (DAMP) molecules, such as high mobility group box 1 protein (HMGB1), but the receptor(s) underlying DAMP signaling have not been identified. Microglia morphology and DAMP signaling in enriched rat hippocampal microglia were examined during the development and expression of chronic unpredictable stress (CUS)-induced behavioral deficits, including long-term, persistent changes after CUS. The results show that CUS promotes significant morphological changes and causes robust upregulation of HMGB1 messenger RNA in enriched hippocampal microglia, an effect that persists for up to 6 weeks after CUS exposure. This coincides with robust and persistent upregulation of receptor for advanced glycation end products (RAGE) messenger RNA, but not toll-like receptor 4 in hippocampal microglia. CUS also increased surface expression of RAGE protein on hippocampal microglia as determined by flow cytometry and returned to basal levels 5 weeks after CUS. Importantly, exposure to short-term stress was sufficient to increase RAGE surface expression as well as anhedonic behavior, reflecting a primed state that results from a persistent increase in RAGE messenger RNA expression. Further evidence for DAMP signaling in behavioral responses is provided by evidence that HMGB1 infusion into the hippocampus was sufficient to cause anhedonic behavior and by evidence that RAGE knockout mice were resilient to stress-induced anhedonia. Together, the results provide evidence of persistent microglial HMGB1-RAGE expression that increases vulnerability to depressive-like behaviors long after chronic stress exposure. Copyright © 2017 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.

  16. Explaining seemingly paradoxical consumer experiences: conjoining weekly road rage and church attendance.

    Science.gov (United States)

    Gau, Li-Shiue; Woodside, Arch G; Martin, Drew

    2015-02-01

    The purposes of the current study are threefold: Provide evidence that an extreme paradoxical group exists-people frequently attending church and exhibiting road rage, profile this group, and frame possible explanations for the seemingly paradoxical behaviors. This study employs data from a national (USA) lifestyle survey conducted by Market Facts with 3,350 American respondents. The major questions asked about church participation and road-rage behavior ("giving a finger" and "flashing headlights"). Nomologically, relevant activities include 3 items for church goers and 3 items for road-rage givers. Additionally, 14 items profiled the lifestyles of the unique paradoxical behavior segment. Utilizing cross-tabulation tables, property space analyses identify the double extreme (XX) group (18 people) and other 6 groups with a significant chi-square test, confirming the extreme group exists. Analyses of variance test results show that comparing nomologically relevant activities among the seven groups is all statistically significant, indicating the nomological validity is met. Overall, the XX group tends to have more males, be younger, and have a higher proportion of people working in sales. The profile of lifestyle analyses shows the XX group members have both high ambitions and expectations, might be very frustrated individuals, and equip with the adventurous and masculine traits related to aggression. The XX behavior group's demographic and psychographic characteristics portray similar lifestyles that differ from other groups. Case-based analyses provide further contextual information of nuances to XX segment individuals. The limited energy theory, the Eagleman's theory of unconscious mind, and justification theory help to explain why people conjointly go to church and commit road rage. Addressing chronic paradoxical behaviors provides implications for social de-marketing to reduce aggressive anti-social behavior such as road rage. Frequent church attendance may

  17. Review: Joschka Philipps, Ambivalent Rage: Youth Gangs and Urban Protest in Conakry, Guinea (2013)

    OpenAIRE

    Ineke van Kessel; Afrika-Studiecentrum Leiden

    2014-01-01

    Review of the Monograph:Joschka Philipps, Ambivalent Rage: Youth Gangs and Urban Protest in Conakry, Guinea, Paris: L’Harmattan, 2013, ISBN 978-2-343-01577-4, 238 pp. Besprechung der Monographie:Joschka Philipps, Ambivalent Rage: Youth Gangs and Urban Protest in Conakry, Guinea, Paris: L’Harmattan, 2013, ISBN 978-2-343-01577-4, 238 Seiten

  18. Parallel Implementation of the Multi-Dimensional Spectral Code SPECT3D on large 3D grids.

    Science.gov (United States)

    Golovkin, Igor E.; Macfarlane, Joseph J.; Woodruff, Pamela R.; Pereyra, Nicolas A.

    2006-10-01

    The multi-dimensional collisional-radiative, spectral analysis code SPECT3D can be used to study radiation from complex plasmas. SPECT3D can generate instantaneous and time-gated images and spectra, space-resolved and streaked spectra, which makes it a valuable tool for post-processing hydrodynamics calculations and direct comparison between simulations and experimental data. On large three dimensional grids, transporting radiation along lines of sight (LOS) requires substantial memory and CPU resources. Currently, the parallel option in SPECT3D is based on parallelization over photon frequencies and allows for a nearly linear speed-up for a variety of problems. In addition, we are introducing a new parallel mechanism that will greatly reduce memory requirements. In the new implementation, spatial domain decomposition will be utilized allowing transport along a LOS to be performed only on the mesh cells the LOS crosses. The ability to operate on a fraction of the grid is crucial for post-processing the results of large-scale three-dimensional hydrodynamics simulations. We will present a parallel implementation of the code and provide a scalability study performed on a Linux cluster.

  19. Assessment on the characteristics of the analysis code for KALIMER PSDRS

    Energy Technology Data Exchange (ETDEWEB)

    Eoh, Jae Hyuk; Sim, Yoon Sub; Kim, Seong O.; Kim, Yeon Sik; Kim, Eui Kwang; Wi, Myung Hwan [Korea Atomic Energy Research Institute, Taejeon (Korea)

    2002-04-01

    The PARS2 code was developed to analyze the RHR(Residual Heat Removal) system, especially PSDRS(Passive Safety Decay Heat Removal System), of KALIMER. In this report, preliminary verification and sensitivity analyses for PARS2 code were performed. From the results of the analyses, the PARS2 code has a good agreement with the experimental data of CRIEPI in the range of turbulent airside flow, and also the radiation heat transfer mode was well predicted. In this verification work, it was founded that the code calculation stopped in a very low air flowrate, and the numerical scheme related to the convergence of PARS2 code was adjusted to solve this problem. Through the sensitivity analysis on the PARS2 calculation results from the change of the input parameters, the pool-mixing coefficient related to the heat capacity of the structure in the system was improved such that the physical phenomenon can be well predicted. Also the initial conditions for the code calculation such as the hot and cold pool temperatures at the PSDRS commencing time were set up by using the transient analysis of the COMMIX code, and the surface emissivity of PSDRS was investigated and its permitted variation rage was set up. From this study, overall sensitivity characteristics of the PARS2 code were investigated and the results of the sensitivity analyses can be used in the design of the RHR system of KALIMER. 14 refs., 28 figs., 2 tabs. (Author)

  20. RAGE Architecture for Reusable Serious Gaming Technology Components

    NARCIS (Netherlands)

    Van der Vegt, Wim; Westera, Wim; Nyamsuren, Enkhbold; Georgiev, Atanas; Martinez Ortiz, Ivan

    2016-01-01

    For seizing the potential of serious games, the RAGE project - funded by the Horizon-2020 Programme of the European Commission - will make available an interoperable set of advanced technology components (software assets) that support game studios at serious game development. This paper describes

  1. RAGE-Specific Inhibitor FPS-ZM1 Attenuates AGEs-Induced Neuroinflammation and Oxidative Stress in Rat Primary Microglia.

    Science.gov (United States)

    Shen, Chao; Ma, Yingjuan; Zeng, Ziling; Yin, Qingqing; Hong, Yan; Hou, Xunyao; Liu, Xueping

    2017-10-01

    Advanced glycation end products (AGEs) enhance microglial activation and intensify the inflammatory response and oxidative stress in the brain. This process may occur due to direct cytotoxicity or interacting with AGEs receptors (RAGE), which are expressed on the surface of microglia. FPS-ZM1 is a high-affinity but nontoxic RAGE-specific inhibitor that has been recently shown to attenuate the Aβ-induced inflammatory response by blocking the ligation of Aβ to RAGE. In this study, we further investigated the effect of FPS-ZM1 on the AGEs/RAGE interaction and downstream elevation of neuroinflammation and oxidative stress in primary microglia cells. The results suggested that FPS-ZM1 significantly suppressed AGEs-induced RAGE overexpression, RAGE-dependent microglial activation, nuclear translocation of nuclear factor kappaB p65 (NF-κB p65), and the expression of downstream inflammatory mediators such as tumor necrosis factor-alpha (TNF-α), interleukin-1 beta (IL-1β), cyclooxygenase 2 (COX-2)/prostaglandin E2 (PGE2) and inducible nitric oxide synthase (iNOS)/nitric oxide (NO). Furthermore, FPS-ZM1 attenuated AGEs-stimulated NADPH oxidase (NOX) activation and reactive oxygen species (ROS) expression. Finally, FPS-ZM1 elevated the levels of transcription factors nuclear-factor (erythroid-derived 2)-like 2 (Nrf2) and heme oxygenase-1 (HO-1), as well as decreased antioxidant capacity and increased production of oxidative species. Our results suggest that FPS-ZM1 may be neuroprotective through attenuating microglial activation, oxidative stress and inflammation by blocking RAGE.

  2. Ethical codes. Fig leaf argument, ballast or cultural element for radiation protection?; Ethik-Codes. Feigenblatt, Ballast oder Kulturelement fuer den Strahlenschutz?

    Energy Technology Data Exchange (ETDEWEB)

    Gellermann, Rainer [Nuclear Control and Consulting GmbH, Braunschweig (Germany)

    2014-07-01

    The international association for radiation protection (IRPA) adopted in May 2004 a Code of Ethics in order to allow their members to hold an adequate professional level of ethical line of action. Based on this code of ethics the professional body of radiation protection (Fachverband fuer Strahlenschutz) has developed its own ethical code and adopted in 2005.

  3. T1 mapping of the mouse brain following fractionated manganese administration using MP2RAGE.

    Science.gov (United States)

    Driencourt, Luc; Romero, Carola Jacqueline; Lepore, Mario; Eggenschwiler, Florent; Reynaud, Olivier; Just, Nathalie

    2017-01-01

    With the increasing development of transgenic mouse models of neurodegenerative diseases allowing improved understanding of the underlying mechanisms of these disorders, robust quantitative mapping techniques are also needed in rodents. MP2RAGE has shown great potential for structural imaging in humans at high fields. In the present work, MP2RAGE was successfully implemented at 9.4T and 14.1T. Following fractionated injections of MnCl 2 , MP2RAGE images were acquired allowing simultaneous depiction and T 1 mapping of structures in the mouse brain at both fields. In addition, T 1 maps demonstrated significant T 1 shortenings in different structures of the mouse brain (p < 0.0008 at 9.4T, p < 0.000001 at 14.1T). T 1 values recovered to the levels of saline-injected animals 1 month after the last injection except in the pituitary gland. We believe that MP2RAGE represents an important prospective translational tool for further structural MRI.

  4. Minimum entropy production closure of the photo-hydrodynamic equations for radiative heat transfer

    International Nuclear Information System (INIS)

    Christen, Thomas; Kassubek, Frank

    2009-01-01

    In the framework of a two-moment photo-hydrodynamic modelling of radiation transport, we introduce a concept for the determination of effective radiation transport coefficients based on the minimization of the local entropy production rate of radiation and (generally nongrey) matter. The method provides the nonequilibrium photon distribution from which the effective (variable) absorption coefficients and the variable Eddington factor (VEF) can be calculated. For a single band model, the photon distribution depends explicitly on the frequency dependence of the absorption coefficient. Without introducing artificial fit parameters, multi-group or multi-band concepts, our approach reproduces the exact results in both limits of optically thick (Rosseland mean) and optically thin (Planck mean) media, in contrast to the maximum entropy method. Also the results for general nonequilibrium radiation between the limits of diffusive and ballistic photons are reasonable. We conjecture that the reason for the success of our approach lies in the linearity of the underlying Boltzmann equation of the photon gas. The method is illustrated and discussed for grey matter and for a simple example of nongrey matter with a two-band absorption spectrum. The method is also briefly compared with the maximum entropy concept.

  5. Interaction between tumor cell surface receptor RAGE and proteinase 3 mediates prostate cancer metastasis to bone

    Science.gov (United States)

    Kolonin, Mikhail G.; Sergeeva, Anna; Staquicini, Daniela I.; Smith, Tracey L.; Tarleton, Christy A.; Molldrem, Jeffrey J.; Sidman, Richard L.; Marchiò, Serena; Pasqualini, Renata; Arap, Wadih

    2017-01-01

    Human prostate cancer often metastasizes to bone, but the biological basis for such site-specific tropism remains largely unresolved. Recent work led us to hypothesize that this tropism may reflect pathogenic interactions between RAGE, a cell surface receptor expressed on malignant cells in advanced prostate cancer, and proteinase 3 (PR3), a serine protease present in inflammatory neutrophils and hematopoietic cells within the bone marrow microenvironment. In this study, we establish that RAGE-PR3 interaction mediates homing of prostate cancer cells to the bone marrow. PR3 bound to RAGE on the surface of prostate cancer cells in vitro, inducing tumor cell motility through a non-proteolytic signal transduction cascade involving activation and phosphorylation of ERK1/2 and JNK1. In preclinical models of experimental metastasis, ectopic expression of RAGE on human prostate cancer cells was sufficient to promote bone marrow homing within a short time frame. Our findings demonstrate how RAGE-PR3 interactions between human prostate cancer cells and the bone marrow microenvironment mediate bone metastasis during prostate cancer progression, with potential implications for prognosis and therapeutic intervention. PMID:28428279

  6. [The Habit of Rage in a United States Ghetto.

    Science.gov (United States)

    Bourgois, Philippe; Castrillo, Fernando Montero; Hart, Laurie; Karandinos, George

    2013-04-01

    For five years, the open air drug sales block where the authors resided and conducted participant-observation fieldwork in the Puerto Rican corner of inner-city Philadelphia was subject to a routinized whirlwind of shootings, stabbings and assaults. The narcotics industry filled the void left by deindustrialization, turning the city's former factory district into an open-air narcotics supermarket staffed at the entry level by young Puerto Ricans serving primarily poor white injectors. A capacity to mobilize rage ensures success in the drug economy, protection in prison, and minimal income for the no-longer-worthy poor who are diagnosed as cognitively disabled. Many residents seek alliances in social networks that oblige them to participate in solidary exchanges of assistive violence. A dynamic of embodied, primitive accumulation kills, maims, disables or incarcerates most of this industry's entry-level employees and customers. Artificially high profit margins depend on violence and coercion. A rage-filled habitus propels street-level sellers into violently defending the micro-monopoly power of their bosses in the underground economy as if it were fun. They rush to enforce commercial transactions in the absence of protective legal sanctions in an environment of scarcity that is flooded by streams of cash, addictive drugs and automatic weapons. With the end of welfare entitlements, the left hand of the state, in the form of social services, attempts to continue subsidies for vulnerable individuals by diagnosing scarred bodies and brains as proof of permanent cognitive disability in need of heavy pharmaceutical medication. Periodic outbursts of interpersonal or of self-inflicted rage-filled violence emerge as the best way to ensure the continuity of that fragile public subsidy. Simultaneously, within the bowels of the right hand of the state, in overcrowded, hostilely-supervised violent prisons, rage becomes a valuable physical self-protection strategy for inmates. In

  7. NASA space radiation transport code development consortium

    International Nuclear Information System (INIS)

    Townsend, L. W.

    2005-01-01

    Recently, NASA established a consortium involving the Univ. of Tennessee (lead institution), the Univ. of Houston, Roanoke College and various government and national laboratories, to accelerate the development of a standard set of radiation transport computer codes for NASA human exploration applications. This effort involves further improvements of the Monte Carlo codes HETC and FLUKA and the deterministic code HZETRN, including developing nuclear reaction databases necessary to extend the Monte Carlo codes to carry out heavy ion transport, and extending HZETRN to three dimensions. The improved codes will be validated by comparing predictions with measured laboratory transport data, provided by an experimental measurements consortium, and measurements in the upper atmosphere on the balloon-borne Deep Space Test Bed (DSTB). In this paper, we present an overview of the consortium members and the current status and future plans of consortium efforts to meet the research goals and objectives of this extensive undertaking. (authors)

  8. RAGE-dependent activation of gene expression of superoxide dismutase and vanins by AGE-rich extracts in mice cardiac tissue and murine cardiac fibroblasts.

    Science.gov (United States)

    Leuner, Beatrice; Ruhs, Stefanie; Brömme, Hans-Jürgen; Bierhaus, Angelika; Sel, Saadettin; Silber, Rolf-Edgar; Somoza, Veronika; Simm, Andreas; Nass, Norbert

    2012-10-01

    Advanced glycation end products (AGEs) are stable compounds formed from initial Maillard reaction products. They are considered as markers for ageing and often associated with age-related, degenerative diseases. Bread crust represents an established model for nutritional compounds rich in AGEs and is able to induce antioxidative defense genes such as superoxide dismutases and vanins in cardiac cells. The aim of this study was to investigate to what extend the receptor for AGEs (RAGE) contributes to this response. Signal transduction in response to bread crust extract was analysed in cardiac fibroblasts derived from C57/B6-NCrl (RAGE +/+) and the corresponding RAGE-knock out C57/B6-NCrl mouse strain (RAGE -/-). Activation of superoxide dismutases in animals was then analysed upon bread crust feeding in these two mice strains. Cardiac fibroblasts from RAGE -/- mice did not express RAGE, but the expression of AGER-1 and AGER-3 was up-regulated, whereas the expression of SR-B1 was down-regulated. RAGE -/- cells were less sensitive to BCE in terms of MAP-kinase phosphorylation and NF-κB reporter gene activation. Bread crust extract induced mRNA levels of MnSOD and Vnn-1 were also reduced in RAGE -/- cells, whereas Vnn-3 mRNA accumulation seemed to be RAGE receptor independent. In bread crust feeding experiments, RAGE -/- mice did not exhibit an activation of MnSOD-mRNA and -protein accumulation as observed for the RAGE +/+ animals. In conclusion, RAGE was clearly a major factor for the induction of antioxidant defense signals derived from bread crust in cardiac fibroblast and mice. Nevertheless higher doses of bread crust extract could overcome the RAGE dependency in cell cultures, indicating that additional mechanisms are involved in BCE-mediated activation of SOD and vanin expression.

  9. Three-dimensional hydrodynamical simulations of stellar collisions. II. White dwarfs

    International Nuclear Information System (INIS)

    Benz, W.; Thielemann, F.K.; Hills, J.G.

    1989-01-01

    Three-dimensional numerical simulations are presented for collisions between white dwarfs, using a smooth-particle hydrodynamics code with 5000 particles. The code allows for radiation and degenerate pressure and uses a reduced nuclear network which models the large release of nuclear energy. Two different collision models are considered over a range of impact parameters: between two 0.06 solar-mass C-O white dwarfs and between 0.9 solar-mass and 0.7 solar-mass C-O white dwarfs. In nearly head-on collisions, a very substantial fraction of the mass is lost as a result of a large release of nuclear energy. In grazing collisions, the fraction of mass lost is close to that produced in collisions between main-sequence stars. The quantity of processed elements ejected into the ISM by these collisions does not significantly affect the chemical evolution of the Galaxy. 24 refs

  10. Simulation of Hamming Coding and Decoding for Microcontroller Radiation Hardening

    OpenAIRE

    Rehab I. Abdul Rahman; Mazhar B. Tayel

    2015-01-01

    This paper presents a method of hardening the 8051 micro-controller, able to assure reliable operation in the presence of bit flips caused by radiation. Aiming at avoiding such faults in the 8051 micro-controller, Hamming code protection was used in its SRAM memory and registers. A VHDL code has been used for this hamming code protection.

  11. Nyx: Adaptive mesh, massively-parallel, cosmological simulation code

    Science.gov (United States)

    Almgren, Ann; Beckner, Vince; Friesen, Brian; Lukic, Zarija; Zhang, Weiqun

    2017-12-01

    Nyx code solves equations of compressible hydrodynamics on an adaptive grid hierarchy coupled with an N-body treatment of dark matter. The gas dynamics in Nyx use a finite volume methodology on an adaptive set of 3-D Eulerian grids; dark matter is represented as discrete particles moving under the influence of gravity. Particles are evolved via a particle-mesh method, using Cloud-in-Cell deposition/interpolation scheme. Both baryonic and dark matter contribute to the gravitational field. In addition, Nyx includes physics for accurately modeling the intergalactic medium; in optically thin limits and assuming ionization equilibrium, the code calculates heating and cooling processes of the primordial-composition gas in an ionizing ultraviolet background radiation field.

  12. Controlling Energy Radiations of Electromagnetic Waves via Frequency Coding Metamaterials.

    Science.gov (United States)

    Wu, Haotian; Liu, Shuo; Wan, Xiang; Zhang, Lei; Wang, Dan; Li, Lianlin; Cui, Tie Jun

    2017-09-01

    Metamaterials are artificial structures composed of subwavelength unit cells to control electromagnetic (EM) waves. The spatial coding representation of metamaterial has the ability to describe the material in a digital way. The spatial coding metamaterials are typically constructed by unit cells that have similar shapes with fixed functionality. Here, the concept of frequency coding metamaterial is proposed, which achieves different controls of EM energy radiations with a fixed spatial coding pattern when the frequency changes. In this case, not only different phase responses of the unit cells are considered, but also different phase sensitivities are also required. Due to different frequency sensitivities of unit cells, two units with the same phase response at the initial frequency may have different phase responses at higher frequency. To describe the frequency coding property of unit cell, digitalized frequency sensitivity is proposed, in which the units are encoded with digits "0" and "1" to represent the low and high phase sensitivities, respectively. By this merit, two degrees of freedom, spatial coding and frequency coding, are obtained to control the EM energy radiations by a new class of frequency-spatial coding metamaterials. The above concepts and physical phenomena are confirmed by numerical simulations and experiments.

  13. Optimizing the magnetization-prepared rapid gradient-echo (MP-RAGE sequence.

    Directory of Open Access Journals (Sweden)

    Jinghua Wang

    Full Text Available The three-dimension (3D magnetization-prepared rapid gradient-echo (MP-RAGE sequence is one of the most popular sequences for structural brain imaging in clinical and research settings. The sequence captures high tissue contrast and provides high spatial resolution with whole brain coverage in a short scan time. In this paper, we first computed the optimal k-space sampling by optimizing the contrast of simulated images acquired with the MP-RAGE sequence at 3.0 Tesla using computer simulations. Because the software of our scanner has only limited settings for k-space sampling, we then determined the optimal k-space sampling for settings that can be realized on our scanner. Subsequently we optimized several major imaging parameters to maximize normal brain tissue contrasts under the optimal k-space sampling. The optimal parameters are flip angle of 12°, effective inversion time within 900 to 1100 ms, and delay time of 0 ms. In vivo experiments showed that the quality of images acquired with our optimal protocol was significantly higher than that of images obtained using recommended protocols in prior publications. The optimization of k-spacing sampling and imaging parameters significantly improved the quality and detection sensitivity of brain images acquired with MP-RAGE.

  14. The RAGE Software Asset Model and Metadata Model

    NARCIS (Netherlands)

    Georgiev, Atanas; Grigorov, Alexander; Bontchev, Boyan; Boytchev, Pavel; Stefanov, Krassen; Bahreini, Kiavash; Nyamsuren, Enkhbold; Van der Vegt, Wim; Westera, Wim; Prada, Rui; Hollins, Paul; Moreno, Pablo

    2016-01-01

    Software assets are key output of the RAGE project and they can be used by applied game developers to enhance the pedagogical and educational value of their games. These software assets cover a broad spectrum of functionalities – from player analytics including emotion detection to intelligent

  15. MQRAD, a computer code for synchrotron radiation from quadrupole magnets

    International Nuclear Information System (INIS)

    Morimoto, Teruhisa.

    1984-01-01

    The computer code, MQRAD, is developed for the calculation of the synchrotron radiation from the particles passing through quadrupole magnets at the straight section of the electron-positron colliding machine. This code computes the distributions of photon numbers and photon energies at any given points on the beam orbit. In this code, elements such as the quadrupole magnets and the drift spaces can be divided into many sub-elements in order to obtain the results with good accuracy. The synchrotron radiation produced by inserted quadrupole magnets at the interaction region of the electron-positron collider is one of the main background sources to the detector. The masking system against the synchrotron radiation at TRISTAN is very important because of the relatively high beam energy and the long straight section, which are 30 GeV and 100 meters, respectively. MQRAD has been used to design the masking system of the TOPAZ detector and the result is presented here as an example. (author)

  16. Solar Ellerman Bombs in 1D Radiative Hydrodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Reid, A.; Mathioudakis, M. [Astrophysics Research Centre, School of Mathematics and Physics, Queen’s University Belfast, Belfast BT7 1NN (United Kingdom); Kowalski, A. [Department of Astrophysical and Planetary Sciences, University of Colorado Boulder, 2000 Colorado Avenue, Boulder, CO 80305 (United States); Doyle, J. G. [Armagh Observatory and Planetarium, College Hill, Armagh BT61 9DG (United Kingdom); Allred, J. C., E-mail: aaron.reid@qub.ac.uk [NASA/Goddard Space Flight Center, Code 671, Greenbelt, MD 20771 (United States)

    2017-02-01

    Recent observations from the Interface Region Imaging Spectrograph appear to show impulsive brightenings in high temperature lines, which when combined with simultaneous ground-based observations in H α , appear co-spatial to Ellerman Bombs (EBs). We use the RADYN one-dimensional radiative transfer code in an attempt to try and reproduce the observed line profiles and simulate the atmospheric conditions of these events. Combined with the MULTI/RH line synthesis codes, we compute the H α , Ca ii 8542 Å, and Mg ii h and k lines for these simulated events and compare them to previous observations. Our findings hint that the presence of superheated regions in the photosphere (>10,000 K) is not a plausible explanation for the production of EB signatures. While we are able to recreate EB-like line profiles in H α , Ca ii 8542 Å, and Mg ii h and k, we cannot achieve agreement with all of these simultaneously.

  17. French version of the Rating Scale for Aggressive Behaviour in the Elderly (F-RAGE: Psychometric properties and diagnostic accuracy

    Directory of Open Access Journals (Sweden)

    Barry Adama

    Full Text Available ABSTRACT Aggressive behaviour is the most disturbing and distressing behaviour displayed by elderly people. The prevalence of aggressive behaviour is around 50% among psychogeriatric patients. Objective: This study sought to analyze the psychometric properties and diagnostic accuracy of the French version of the Rating Scale for Aggressive Behaviour in the Elderly (F-RAGE. Methods: The F-RAGE was administered to 79 patients hospitalized in a geriatric psychiatry department. A psychiatrist, who was blind to the subjects' RAGE scores, performed the diagnosis for aggressivity based on global clinical impression. The F-RAGE and MMSE were applied by a trained researcher blind to subjects' clinical diagnoses while the Cohen-Mansfield Agitation Inventory and Neuropsychiatric Inventory were administered by medical and nursing staff. Internal consistency, reliability, cut-off points, sensitivity and specificity for F-RAGE were estimated. Results: F-RAGE showed satisfactory validity and reliability measurements. Regarding reliability, Cronbach's a coefficient was satisfactory with a value of 0.758. For diagnostic accuracy, a cut-off point of 8 points (sensitivity=74.19%; specificity=97.98% and area under curve of 0.960 were estimated to distinguish between aggressive patients and control subjects. Discussion: F-RAGE showed acceptable psychometric properties, supported by evidence of validity and reliability for its use in the diagnosis of aggressive behaviour in elderly.

  18. Plausible Roles for RAGE in Conditions Exacerbated by Direct and Indirect (Secondhand) Smoke Exposure.

    Science.gov (United States)

    Lewis, Joshua B; Hirschi, Kelsey M; Arroyo, Juan A; Bikman, Benjamin T; Kooyman, David L; Reynolds, Paul R

    2017-03-17

    Approximately 1 billion people smoke worldwide, and the burden placed on society by primary and secondhand smokers is expected to increase. Smoking is the leading risk factor for myriad health complications stemming from diverse pathogenic programs. First- and second-hand cigarette smoke contains thousands of constituents, including several carcinogens and cytotoxic chemicals that orchestrate chronic inflammatory responses and destructive remodeling events. In the current review, we outline details related to compromised pulmonary and systemic conditions related to smoke exposure. Specifically, data are discussed relative to impaired lung physiology, cancer mechanisms, maternal-fetal complications, cardiometabolic, and joint disorders in the context of smoke exposure exacerbations. As a general unifying mechanism, the receptor for advanced glycation end-products (RAGE) and its signaling axis is increasingly considered central to smoke-related pathogenesis. RAGE is a multi-ligand cell surface receptor whose expression increases following cigarette smoke exposure. RAGE signaling participates in the underpinning of inflammatory mechanisms mediated by requisite cytokines, chemokines, and remodeling enzymes. Understanding the biological contributions of RAGE during cigarette smoke-induced inflammation may provide critically important insight into the pathology of lung disease and systemic complications that combine during the demise of those exposed.

  19. PEREGRINE: An all-particle Monte Carlo code for radiation therapy

    International Nuclear Information System (INIS)

    Hartmann Siantar, C.L.; Chandler, W.P.; Rathkopf, J.A.; Svatos, M.M.; White, R.M.

    1994-09-01

    The goal of radiation therapy is to deliver a lethal dose to the tumor while minimizing the dose to normal tissues. To carry out this task, it is critical to calculate correctly the distribution of dose delivered. Monte Carlo transport methods have the potential to provide more accurate prediction of dose distributions than currently-used methods. PEREGRINE is a new Monte Carlo transport code developed at Lawrence Livermore National Laboratory for the specific purpose of modeling the effects of radiation therapy. PEREGRINE transports neutrons, photons, electrons, positrons, and heavy charged-particles, including protons, deuterons, tritons, helium-3, and alpha particles. This paper describes the PEREGRINE transport code and some preliminary results for clinically relevant materials and radiation sources

  20. Soluble Receptor for Advanced Glycation End Products (sRAGE is Up-Regulated in Multiple Sclerosis Patients Treated with Interferon β-1a

    Directory of Open Access Journals (Sweden)

    Mahnoosh Rahimi

    2018-03-01

    Full Text Available Background/Aims: Multiple sclerosis (MS is a chronic inflammatory disorder of the central nervous system. Considering the role of immune system in its pathogenesis, researchers have focused on evaluation of the expression of immune-related genes or proteins in MS patients. Among proteins whose participation in inflammatory process has been documented is the receptor for advanced glycation end products (RAGE. Methods: In the present study, we compared RAGE transcript levels by means of quantitative real-time PCR as well as the serum level of soluble RAGE (sRAGE by means of enzyme- linked immunosorbent assay (ELISA in 50 IFNβ-1a responsive relapsing-remitting MS patients when compared with age and sex-matched healthy subjects. Results: Elevated expression of RAGE as well as higher levels of sRAGE were detected in IFN-β responsive MS patients compared with the controls. A significant inverse correlation between sRAGE plasma concentrations and the expanded disability status scale (EDSS was also detected in which each unit of increase in sRAGE level resulted in a 0.308 unit decrease in EDSS. Conclusion: Considering the stable clinical state of the MS patients in this study and their response to IFNβ-1a, the elevated levels of sRAGE in patients compared with healthy subjects could be related to the effects of this kind of treatment.

  1. 3D radiative transfer in stellar atmospheres

    International Nuclear Information System (INIS)

    Carlsson, M

    2008-01-01

    Three-dimensional (3D) radiative transfer in stellar atmospheres is reviewed with special emphasis on the atmospheres of cool stars and applications. A short review of methods in 3D radiative transfer shows that mature methods exist, both for taking into account radiation as an energy transport mechanism in 3D (magneto-) hydrodynamical simulations of stellar atmospheres and for the diagnostic problem of calculating the emergent spectrum in more detail from such models, both assuming local thermodynamic equilibrium (LTE) and in non-LTE. Such methods have been implemented in several codes, and examples of applications are given.

  2. Clinical and Biological Predictors of Plasma Levels of Soluble RAGE in Critically Ill Patients: Secondary Analysis of a Prospective Multicenter Observational Study

    Directory of Open Access Journals (Sweden)

    Thibaut Pranal

    2018-01-01

    Full Text Available Rationale. Although soluble forms of the receptor for advanced glycation end products (RAGE have been recently proposed as biomarkers in multiple acute or chronic diseases, few studies evaluated the influence of usual clinical and biological parameters, or of patient characteristics and comorbidities, on circulating levels of soluble RAGE in the intensive care unit (ICU setting. Objectives. To determine, among clinical and biological parameters that are usually recorded upon ICU admission, which variables, if any, could be associated with plasma levels of soluble RAGE. Methods. Data for this ancillary study were prospectively obtained from adult patients with at least one ARDS risk factor upon ICU admission enrolled in a large multicenter observational study. At ICU admission, plasma levels of total soluble RAGE (sRAGE and endogenous secretory (esRAGE were measured by duplicate ELISA and baseline patient characteristics, comorbidities, and usual clinical and biological indices were recorded. After univariate analyses, significant variables were used in multivariate, multidimensional analyses. Measurements and Main Results. 294 patients were included in this ancillary study, among whom 62% were admitted for medical reasons, including septic shock (11%, coma (11%, and pneumonia (6%. Although some variables were associated with plasma levels of RAGE soluble forms in univariate analysis, multidimensional analyses showed no significant association between admission parameters and baseline plasma sRAGE or esRAGE. Conclusions. We found no obvious association between circulating levels of soluble RAGE and clinical and biological indices that are usually recorded upon ICU admission. This trial is registered with NCT02070536.

  3. The Spectacle of Redemption: Guilt and Violence in Martin Scorsese’s Raging Bull

    Directory of Open Access Journals (Sweden)

    Arturo Serrano

    2015-06-01

    Full Text Available Of all the characters that undertake a search for redemption in Martin Scorsese’s films, perhaps it is the story of Jake La Motta in Raging Bull that for many reasons presents the greatest challenge to understanding redemption’s role in the narratives of his films. Is Jake La Motta a redeemed character at the end of Raging Bull? I argue that Scorsese uses Raging Bull to criticize a ritualistic view of redemption by portraying the beginning of Jake’s search as a futile attempt to submit himself to a public spectacle of ritual violence in the boxing ring while visually relating this to the Catholic sacraments and the crucifixion. It will only be later—in the loneliness of a jail cell, estranged from his family and without having to have had gone through a rite—that Jake achieves the self-awareness redemption requires.

  4. High-mobility group B1 (HMGB1) and receptor for advanced glycation end-products (RAGE) expression in canine lymphoma.

    Science.gov (United States)

    Sterenczak, Katharina A; Joetzke, Alexa E; Willenbrock, Saskia; Eberle, Nina; Lange, Sandra; Junghanss, Christian; Nolte, Ingo; Bullerdiek, Jörn; Simon, Daniela; Murua Escobar, Hugo

    2010-12-01

    Canine lymphoma is a commonly occurring, spontaneously developing neoplasia similar to human non-Hodgkin's lymphoma and, thus, is used as a valuable model for human malignancy. HMGB1 and RAGE are strongly associated with tumour progression and vascularisation. Consequently, deregulated RAGE and HMGB1 may play an important role in the mechanisms involved in lymphoma progression. Expression patterns of HMGB1 and RAGE were analysed in 22 canine lymphoma and three canine non-neoplastic control samples via real time PCR and canine beta-glucuronidase gene (GUSB) as endogenous control. HMGB1 was up-regulated in the neoplastic samples, while RAGE expression remained inconspicuous. This study demonstrated similar mechanisms in lymphoma progression in humans and dogs due to overexpression of HMGB1, which was described in human lymphomas. RAGE remained stable in terms of expression indicating that the extracellular HMGB1-induced effects are regulated by HMGB1 itself.

  5. HMGB1/RAGE Signaling and Pro-Inflammatory Cytokine Responses in Non-HIV Adults with Active Pulmonary Tuberculosis.

    Directory of Open Access Journals (Sweden)

    Grace Lui

    Full Text Available We aimed to study the pathogenic roles of High-Mobility Group Box 1 (HMGB1 / Receptor-for-Advanced-Glycation-End-products (RAGE signaling and pro-inflammatory cytokines in patients with active pulmonary tuberculosis (PTB.A prospective study was conducted among non-HIV adults newly-diagnosed with active PTB at two acute-care hospitals (n = 80; age-and-sex matched asymptomatic individuals (tested for latent TB were used for comparison (n = 45. Plasma concentrations of 8 cytokines/chemokines, HMGB1, soluble-RAGE, and transmembrane-RAGE expressed on monocytes/dendritic cells, were measured. Gene expression (mRNA of HMGB1, RAGE, and inflammasome-NALP3 was quantified. Patients' PBMCs were stimulated with recombinant-HMGB1 and MTB-antigen (lipoarabinomannan for cytokine induction ex vivo.In active PTB, plasma IL-8/CXCL8 [median(IQR, 6.0(3.6-15.1 vs 3.6(3.6-3.6 pg/ml, P<0.001] and IL-6 were elevated, which significantly correlated with mycobacterial load, extent of lung consolidation (rs +0.509, P<0.001, severity-score (rs +0.317, P = 0.004, and fever and hospitalization durations (rs +0.407, P<0.001. IL-18 and sTNFR1 also increased. Plasma IL-8/CXCL8 (adjusted OR 1.12, 95%CI 1.02-1.23 per unit increase, P = 0.021 and HMGB1 (adjusted OR 1.42 per unit increase, 95%CI 1.08-1.87, P = 0.012 concentrations were independent predictors for respiratory failure, as well as for ICU admission/death. Gene expression of HMGB1, RAGE, and inflammasome-NALP3 were upregulated (1.2-2.8 fold. Transmembrane-RAGE was increased, whereas the decoy soluble-RAGE was significantly depleted. RAGE and HMGB1 gene expressions positively correlated with cytokine levels (IL-8/CXCL8, IL-6, sTNFR1 and clinico-/radiographical severity (e.g. extent of consolidation rs +0.240, P = 0.034. Ex vivo, recombinant-HMGB1 potentiated cytokine release (e.g. TNF-α when combined with lipoarabinomannan.In patients with active PTB, HMGB1/RAGE signaling and pro-inflammatory cytokines may play important

  6. Effects of ponderomotive forces and space-charge field on laser plasma hydrodynamics

    International Nuclear Information System (INIS)

    Cang Yu; Lu Xin; Wu Huichun; Zhang Jie

    2005-01-01

    Using a two-fluid two-temperature hydrodynamic code, authors studied the hydrodynamics in the interaction of intense (10 15 W/cm 2 ) ultrashort (150 fs) laser pulses and linear density plasmas. The simulation results show the ponderomotive force effect on the formation of the electron density ripples in under-dense region, such ripples increase the reflection of the laser pulse, and on the separation of the plasma in critical surface. Quasi-electroneutrality is not suitable in this case because of the different ponderomotive force and the gradient of thermal-pressure for ions and electrons. Ions are moved by the electrostatic force. Comparing with the simulation results from one-fluid two-temperature code, authors find that under strong ponderomotive force and gradient of thermo-pressure, two-fluid code is more suitable to simulate the hydrodynamics of plasmas. (authors)

  7. AGE and their receptor RAGE in systemic autoimmune diseases : An inflammation propagating factor contributing to accelerated atherosclerosis

    NARCIS (Netherlands)

    Nienhuis, Hans L. A.; Westra, Johanna; Smit, Andries J.; Limburg, Pieter C.; Kallenberg, Cees G. M.; Bijl, Marc

    2009-01-01

    Systemic autoimmune diseases are associated with inflammation, and oxidative stress favouring the formation of advanced glycation endproducts (AGE), able to modulate cellular functions by activation of receptor for advanced glycation endproducts (RAGE). As RAGE expression is increased in an

  8. Non-LTE radiation in laser-disk target couply

    International Nuclear Information System (INIS)

    Gu Peijun; Fei Weibing; Feng Tinggui; Wu Changshu

    2004-11-01

    The coupling of laser-disk target has been studied by Multi-group radiation transfer code RDMGL. The results show that the X-ray spectra are strongly non-LTE and dependent on the atomic model. The plasma states, laser energy absorption and X-ray conversion rates are almost the same as those simulated by three-temperature model code, which fact shows that the three-temperature model is reasonable to describe the exchange of different kinds of energy and the hydrodynamic phenomena of plasmas in laser-target coupling. (authors)

  9. RADIATION HYDRODYNAMICS MODELS OF THE INNER RIM IN PROTOPLANETARY DISKS

    Energy Technology Data Exchange (ETDEWEB)

    Flock, M.; Turner, N. J. [Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109 (United States); Fromang, S. [Laboratoire AIM, CEA/DSM-CNRS-Université Paris 7, Irfu/Service d’Astrophysique, CEA-Saclay, F-91191 Gif-sur-Yvette (France); Benisty, M., E-mail: mflock@caltech.edu [Université Grenoble Alpes, CNRS, IPAG, F-38000 Grenoble (France)

    2016-08-20

    Many stars host planets orbiting within a few astronomical units (AU). The occurrence rate and distributions of masses and orbits vary greatly with the host star’s mass. These close planets’ origins are a mystery that motivates investigating protoplanetary disks’ central regions. A key factor governing the conditions near the star is the silicate sublimation front, which largely determines where the starlight is absorbed, and which is often called the inner rim. We present the first radiation hydrodynamical modeling of the sublimation front in the disks around the young intermediate-mass stars called Herbig Ae stars. The models are axisymmetric and include starlight heating; silicate grains sublimating and condensing to equilibrium at the local, time-dependent temperature and density; and accretion stresses parameterizing the results of MHD magnetorotational turbulence models. The results compare well with radiation hydrostatic solutions and prove to be dynamically stable. Passing the model disks into Monte Carlo radiative transfer calculations, we show that the models satisfy observational constraints on the inner rim’s location. A small optically thin halo of hot dust naturally arises between the inner rim and the star. The inner rim has a substantial radial extent, corresponding to several disk scale heights. While the front’s overall position varies with the stellar luminosity, its radial extent depends on the mass accretion rate. A pressure maximum develops near the location of thermal ionization at temperatures of about 1000 K. The pressure maximum is capable of halting solid pebbles’ radial drift and concentrating them in a zone where temperatures are sufficiently high for annealing to form crystalline silicates.

  10. Radiative Hydrodynamic Simulations of In Situ Star Formation in the Galactic Center

    Science.gov (United States)

    Frazer, Chris; Heitsch, Fabian

    2018-01-01

    Many stars observed in the Galactic Center (GC) orbit the supermassive black hole (SMBH), Sagittarius A*, in a region where the extreme gravitational field is expected to inhibit star formation. Yet, many of these stars are young which favors an in situ formation scenario. Previous numerical work on this topic has focused on two possible solutions. First, the tidal capture of a > 10^4 Msun infalling molecular cloud by an SMBH may result in the formation of a surrounding gas disk which then rapidly cools and forms stars. This process results in stellar populations that are consistent with the observed stellar disk in the GC. Second, dense gas clumps of approximately 100 Msun on highly eccentric orbits about an SMBH can experience sparks of star formation via orbital compressions occurring during pericenter passage. In my dissertation, I build upon these models using a series of grid-based radiative hydrodynamic simulations, including the effects of both ionizing ultraviolet light from existing stars as well as X-ray radiation emanating from the central black hole. Radiation is treated with an adaptive ray-tracing routine, including appropriate heating and cooling for both neutral and ionized gas. These models show that ultraviolet radiation is sufficiently strong to heat low mass gas clouds, thus suppressing star formation from clump compression. Gas disks that form from cloud capture become sufficiently dense to provide shielding from the radiation of existing central stars, thus allowing star formation to continue. Conversely, X-rays easily penetrate and heat the potentially star forming gas. For sufficiently high radiation fields, this provides a mechanism to disrupt star formation for both scenarios considered above.

  11. DCOMP Award Lecture (Metropolis): A 3D Spectral Anelastic Hydrodynamic Code for Shearing, Stratified Flows

    Science.gov (United States)

    Barranco, Joseph

    2006-03-01

    We have developed a three-dimensional (3D) spectral hydrodynamic code to study vortex dynamics in rotating, shearing, stratified systems (eg, the atmosphere of gas giant planets, protoplanetary disks around newly forming protostars). The time-independent background state is stably stratified in the vertical direction and has a unidirectional linear shear flow aligned with one horizontal axis. Superposed on this background state is an unsteady, subsonic flow that is evolved with the Euler equations subject to the anelastic approximation to filter acoustic phenomena. A Fourier-Fourier basis in a set of quasi-Lagrangian coordinates that advect with the background shear is used for spectral expansions in the two horizontal directions. For the vertical direction, two different sets of basis functions have been implemented: (1) Chebyshev polynomials on a truncated, finite domain, and (2) rational Chebyshev functions on an infinite domain. Use of this latter set is equivalent to transforming the infinite domain to a finite one with a cotangent mapping, and using cosine and sine expansions in the mapped coordinate. The nonlinear advection terms are time integrated explicitly, whereas the Coriolis force, buoyancy terms, and pressure/enthalpy gradient are integrated semi- implicitly. We show that internal gravity waves can be damped by adding new terms to the Euler equations. The code exhibits excellent parallel performance with the Message Passing Interface (MPI). As a demonstration of the code, we simulate vortex dynamics in protoplanetary disks and the Kelvin-Helmholtz instability in the dusty midplanes of protoplanetary disks.

  12. Road rage and road traffic accidents among commercial vehicle drivers in Lahore, Pakistan.

    Science.gov (United States)

    Shaikh, M A; Shaikh, I A; Siddiqui, Z

    2012-04-01

    Road rage and road traffic accidents increase the burden of morbidity and mortality in a population. A cross-sectional survey with convenience sampling was conducted among commercial vehicle drivers in Lahore, Pakistan (n = 901) to record their behaviours/experiences regarding road rage and road traffic accidents. Respondents were asked about incidents of shouting/cursing/rude gestures or threats to physically hurt the person/vehicle, by others or themselves, in the previous 24 hours or 3 months, and their involvement in road traffic accidents in the previous 12 months. Auto-rickshaw drivers were significantly more likely to report various road rage experiences/behaviours and involvement in accidents compared with bus and wagon drivers. A total of 112 respondents (12.4%) reported being involved in a road traffic accident in the previous 12 months but traffic police did not record the accident in 52.7% of cases. The results of this study underline the need to improve road safety in Pakistan.

  13. Modeling warm dense matter experiments using the 3D ALE-AMR code and the move toward exascale computing

    International Nuclear Information System (INIS)

    Koniges, A.; Liu, W.; Barnard, J.; Friedman, A.; Logan, G.; Eder, D.; Fisher, A.; Masters, N.; Bertozzi, A.

    2013-01-01

    The Neutralized Drift Compression Experiment II (NDCX II) is an induction accelerator planned for initial commissioning in 2012. The final design calls for a 3 MeV, Li + ion beam, delivered in a bunch with characteristic pulse duration of 1 ns, and transverse dimension of order 1 mm. The NDCX II will be used in studies of material in the warm dense matter (WDM) regime, and ion beam/hydrodynamic coupling experiments relevant to heavy ion based inertial fusion energy. We discuss recent efforts to adapt the 3D ALE-AMR code to model WDM experiments on NDCX II. The code, which combines Arbitrary Lagrangian Eulerian (ALE) hydrodynamics with Adaptive Mesh Refinement (AMR), has physics models that include ion deposition, radiation hydrodynamics, thermal diffusion, anisotropic material strength with material time history, and advanced models for fragmentation. Experiments at NDCX-II will explore the process of bubble and droplet formation (two-phase expansion) of superheated metal solids using ion beams. Experiments at higher temperatures will explore equation of state and heavy ion fusion beam-to-target energy coupling efficiency. Ion beams allow precise control of local beam energy deposition providing uniform volumetric heating on a timescale shorter than that of hydrodynamic expansion. We also briefly discuss the effects of the move to exascale computing and related computational changes on general modeling codes in fusion. (authors)

  14. Parallel thermal radiation transport in two dimensions

    International Nuclear Information System (INIS)

    Smedley-Stevenson, R.P.; Ball, S.R.

    2003-01-01

    This paper describes the distributed memory parallel implementation of a deterministic thermal radiation transport algorithm in a 2-dimensional ALE hydrodynamics code. The parallel algorithm consists of a variety of components which are combined in order to produce a state of the art computational capability, capable of solving large thermal radiation transport problems using Blue-Oak, the 3 Tera-Flop MPP (massive parallel processors) computing facility at AWE (United Kingdom). Particular aspects of the parallel algorithm are described together with examples of the performance on some challenging applications. (author)

  15. Parallel thermal radiation transport in two dimensions

    Energy Technology Data Exchange (ETDEWEB)

    Smedley-Stevenson, R.P.; Ball, S.R. [AWE Aldermaston (United Kingdom)

    2003-07-01

    This paper describes the distributed memory parallel implementation of a deterministic thermal radiation transport algorithm in a 2-dimensional ALE hydrodynamics code. The parallel algorithm consists of a variety of components which are combined in order to produce a state of the art computational capability, capable of solving large thermal radiation transport problems using Blue-Oak, the 3 Tera-Flop MPP (massive parallel processors) computing facility at AWE (United Kingdom). Particular aspects of the parallel algorithm are described together with examples of the performance on some challenging applications. (author)

  16. Available computer codes and data for radiation transport analysis

    International Nuclear Information System (INIS)

    Trubey, D.K.; Maskewitz, B.F.; Roussin, R.W.

    1975-01-01

    The Radiation Shielding Information Center (RSIC), sponsored and supported by the Energy Research and Development Administration (ERDA) and the Defense Nuclear Agency (DNA), is a technical institute serving the radiation transport and shielding community. It acquires, selects, stores, retrieves, evaluates, analyzes, synthesizes, and disseminates information on shielding and ionizing radiation transport. The major activities include: (1) operating a computer-based information system and answering inquiries on radiation analysis, (2) collecting, checking out, packaging, and distributing large computer codes, and evaluated and processed data libraries. The data packages include multigroup coupled neutron-gamma-ray cross sections and kerma coefficients, other nuclear data, and radiation transport benchmark problem results

  17. A simplified hydrodynamic model of hydrogen flame propagation in reactor vessels

    International Nuclear Information System (INIS)

    Baer, M.; Ratzel, A.

    1983-01-01

    A hydrodynamic model for hydrogen flame propagation in reactor geometries is presented. This model is consistent with the theory of slow combustion in which the gasdynamic field equations are treated in the limit of small Mach numbers. To the lowest order, pressure is spatially uniform. The flame is treated as a density and entropy discontinuity which propagates at prescribed burning velocities, corresponding to laminar or turbulent flames. Radiation cooling of the burned combustion gases and possible preheating of the unburned gases during propagation of the flame is included using a molecular gas-band thermal radiation model. Application of this model has been developed for 1-D variable area flame propagation. Multidimensional effects induced by hydrodynamics and buoyancy are introduced as a correction to the burn velocity (which reflects a modification of planar flame surface to a distorted surface) using experimentally measured pressure-rise time data for hydrogen/air deflagrations in cylindrical vessels. This semianalytical model of flame propagation reduces to a set of ordinary differential equations which describes the temporal variations of vessel pressure, burned volume and gas entropy. The thermodynamic state of the burned gas immediately following the flame is determined using an isobaric Hugoniot relationship. At other locations the burned gas thermodynamic states are determined using a Lagrangian particle tracking method. Results of a computer code using the method are presented

  18. Recent developments in the Los Alamos radiation transport code system

    International Nuclear Information System (INIS)

    Forster, R.A.; Parsons, K.

    1997-01-01

    A brief progress report on updates to the Los Alamos Radiation Transport Code System (LARTCS) for solving criticality and fixed-source problems is provided. LARTCS integrates the Diffusion Accelerated Neutral Transport (DANT) discrete ordinates codes with the Monte Carlo N-Particle (MCNP) code. The LARCTS code is being developed with a graphical user interface for problem setup and analysis. Progress in the DANT system for criticality applications include a two-dimensional module which can be linked to a mesh-generation code and a faster iteration scheme. Updates to MCNP Version 4A allow statistical checks of calculated Monte Carlo results

  19. Advanced glycation end products (AGEs) and their receptor (RAGE) induce apoptosis of periodontal ligament fibroblasts

    International Nuclear Information System (INIS)

    Li, D.X.; Deng, T.Z.; Lv, J.; Ke, J.

    2014-01-01

    Diabetics have an increased prevalence of periodontitis, and diabetes is one of the causative factors of severe periodontitis. Apoptosis is thought to be involved in this pathogenic relationship. The aim of this study was to investigate apoptosis in human periodontal ligament (PDL) fibroblasts induced by advanced glycation end products (AGEs) and their receptor (RAGE). We examined the roles of apoptosis, AGEs, and RAGE during periodontitis in diabetes mellitus using cultured PDL fibroblasts that were treated by AGE-modified bovine serum albumin (AGE-BSA), bovine serum albumin (BSA) alone, or given no treatment (control). Microscopy and real-time quantitative PCR indicated that PDL fibroblasts treated with AGE-BSA were deformed and expressed higher levels of RAGE and caspase 3. Cell viability assays and flow cytometry indicated that AGE-BSA reduced cell viability (69.80±5.50%, P<0.01) and increased apoptosis (11.31±1.73%, P<0.05). Hoechst 33258 staining and terminal-deoxynucleotidyl transferase-mediated nick-end labeling revealed that AGE-BSA significantly increased apoptosis of PDL fibroblasts. The results showed that the changes in PDL fibroblasts induced by AGE-BSA may explain how AGE-RAGE participates in and exacerbates periodontium destruction

  20. Advanced glycation end products (AGEs) and their receptor (RAGE) induce apoptosis of periodontal ligament fibroblasts

    Energy Technology Data Exchange (ETDEWEB)

    Li, D.X.; Deng, T.Z.; Lv, J.; Ke, J. [Department of Stomatology, Air Force General Hospital PLA, Haidian District, Beijing (China)

    2014-09-19

    Diabetics have an increased prevalence of periodontitis, and diabetes is one of the causative factors of severe periodontitis. Apoptosis is thought to be involved in this pathogenic relationship. The aim of this study was to investigate apoptosis in human periodontal ligament (PDL) fibroblasts induced by advanced glycation end products (AGEs) and their receptor (RAGE). We examined the roles of apoptosis, AGEs, and RAGE during periodontitis in diabetes mellitus using cultured PDL fibroblasts that were treated by AGE-modified bovine serum albumin (AGE-BSA), bovine serum albumin (BSA) alone, or given no treatment (control). Microscopy and real-time quantitative PCR indicated that PDL fibroblasts treated with AGE-BSA were deformed and expressed higher levels of RAGE and caspase 3. Cell viability assays and flow cytometry indicated that AGE-BSA reduced cell viability (69.80±5.50%, P<0.01) and increased apoptosis (11.31±1.73%, P<0.05). Hoechst 33258 staining and terminal-deoxynucleotidyl transferase-mediated nick-end labeling revealed that AGE-BSA significantly increased apoptosis of PDL fibroblasts. The results showed that the changes in PDL fibroblasts induced by AGE-BSA may explain how AGE-RAGE participates in and exacerbates periodontium destruction.

  1. Nonsteady heat conduction code with radiation boundary conditions

    International Nuclear Information System (INIS)

    Fillo, J.A.; Benenati, R.; Powell, J.

    1975-01-01

    A heat-transfer model for studying the temperature build-up in graphite blankets for fusion reactors is presented. In essence, the computer code developed is for two-dimensional, nonsteady heat conduction in heterogeneous, anisotropic solids with nonuniform internal heating. Thermal radiation as well as bremsstrahlung radiation boundary conditions are included. Numerical calculations are performed for two design options by varying the wall loading, bremsstrahlung, surface layer thickness and thermal conductivity, blanket dimensions, time step and grid size. (auth)

  2. Method for calculating internal radiation and ventilation with the ADINAT heat-flow code

    International Nuclear Information System (INIS)

    Butkovich, T.R.; Montan, D.N.

    1980-01-01

    One objective of the spent fuel test in Climax Stock granite (SFTC) is to correctly model the thermal transport, and the changes in the stress field and accompanying displacements from the application of the thermal loads. We have chosen the ADINA and ADINAT finite element codes to do these calculations. ADINAT is a heat transfer code compatible to the ADINA displacement and stress analysis code. The heat flow problem encountered at SFTC requires a code with conduction, radiation, and ventilation capabilities, which the present version of ADINAT does not have. We have devised a method for calculating internal radiation and ventilation with the ADINAT code. This method effectively reproduces the results from the TRUMP multi-dimensional finite difference code, which correctly models radiative heat transport between drift surfaces, conductive and convective thermal transport to and through air in the drifts, and mass flow of air in the drifts. The temperature histories for each node in the finite element mesh calculated with ADINAT using this method can be used directly in the ADINA thermal-mechanical calculation

  3. Modeling radiation belt dynamics using a 3-D layer method code

    Science.gov (United States)

    Wang, C.; Ma, Q.; Tao, X.; Zhang, Y.; Teng, S.; Albert, J. M.; Chan, A. A.; Li, W.; Ni, B.; Lu, Q.; Wang, S.

    2017-08-01

    A new 3-D diffusion code using a recently published layer method has been developed to analyze radiation belt electron dynamics. The code guarantees the positivity of the solution even when mixed diffusion terms are included. Unlike most of the previous codes, our 3-D code is developed directly in equatorial pitch angle (α0), momentum (p), and L shell coordinates; this eliminates the need to transform back and forth between (α0,p) coordinates and adiabatic invariant coordinates. Using (α0,p,L) is also convenient for direct comparison with satellite data. The new code has been validated by various numerical tests, and we apply the 3-D code to model the rapid electron flux enhancement following the geomagnetic storm on 17 March 2013, which is one of the Geospace Environment Modeling Focus Group challenge events. An event-specific global chorus wave model, an AL-dependent statistical plasmaspheric hiss wave model, and a recently published radial diffusion coefficient formula from Time History of Events and Macroscale Interactions during Substorms (THEMIS) statistics are used. The simulation results show good agreement with satellite observations, in general, supporting the scenario that the rapid enhancement of radiation belt electron flux for this event results from an increased level of the seed population by radial diffusion, with subsequent acceleration by chorus waves. Our results prove that the layer method can be readily used to model global radiation belt dynamics in three dimensions.

  4. Radiation transport in MEDUSA

    International Nuclear Information System (INIS)

    Rose, S.J.; Evans, R.G.

    1983-09-01

    The transport of energy by X-ray photons has been included in the lD Lagrangian hydrodynamics code, MEDUSA. Calculations of the implosion by 0.53 μm laser irradiation of plastic and glass microballoons of current interest at the Central Laser Facility show that radiation preheats the fill gas and alters the temperature and density profiles during the implosion. A lower maximum gas temperature is obtained and this results, for a DT gas fill, in a greatly reduced neutron yield. (author)

  5. Relativistic hydrodynamic evolutions with black hole excision

    International Nuclear Information System (INIS)

    Duez, Matthew D.; Shapiro, Stuart L.; Yo, H.-J.

    2004-01-01

    We present a numerical code designed to study astrophysical phenomena involving dynamical spacetimes containing black holes in the presence of relativistic hydrodynamic matter. We present evolutions of the collapse of a fluid star from the onset of collapse to the settling of the resulting black hole to a final stationary state. In order to evolve stably after the black hole forms, we excise a region inside the hole before a singularity is encountered. This excision region is introduced after the appearance of an apparent horizon, but while a significant amount of matter remains outside the hole. We test our code by evolving accurately a vacuum Schwarzschild black hole, a relativistic Bondi accretion flow onto a black hole, Oppenheimer-Snyder dust collapse, and the collapse of nonrotating and rotating stars. These systems are tracked reliably for hundreds of M following excision, where M is the mass of the black hole. We perform these tests both in axisymmetry and in full 3+1 dimensions. We then apply our code to study the effect of the stellar spin parameter J/M 2 on the final outcome of gravitational collapse of rapidly rotating n=1 polytropes. We find that a black hole forms only if J/M 2 2 >1, the collapsing star forms a torus which fragments into nonaxisymmetric clumps, capable of generating appreciable 'splash' gravitational radiation

  6. Evaluating anorexia-related brain atrophy using MP2RAGE-based morphometry

    International Nuclear Information System (INIS)

    Boto, Jose; Loevblad, Karl-Olof; Vargas, Maria Isabel; Gkinis, Georgios; Ortiz, Nadia; Roche, Alexis; Kober, Tobias; Marechal, Benedicte; University Hospital; Ecole Polytechnique Federale de Lausanne; Lazeyras, Francois

    2017-01-01

    To evaluate brain atrophy in anorexic patients by automated cerebral segmentation with the magnetization-prepared 2 rapid acquisition gradient echo (MP2RAGE) MRI sequence. Twenty patients (female; mean age, 27.9 years), presenting consecutively for brain MRI between August 2014-December 2016 with clinical suspicion of anorexia nervosa and BMI<18.5 kg/m 2 were included. Controls were ten healthy females (mean age, 26.5 years). Automated brain morphometry was performed based on MP2RAGE. Means of morphometric results in the two groups were compared and correlation with BMI was analysed. Significantly lower volumes of total brain, grey matter (GM), white matter (WM), cerebellum and insula were found in anorexic patients. Anorexics had higher volumes of CSF, ventricles, lateral ventricles and third ventricle. When adjusted means for weight and height were compared, the volume of WM and cerebellum were not significantly different. However, volume of WM was significantly affected by weight and positively correlated with BMI. Significant positive correlations were found between BMI and volumes of total brain, GM, cortical GM and WM. BMI was negatively correlated with volumes of CSF and third ventricle. Brain atrophy was demonstrated in anorexic patients with MP2RAGE-based automated segmentation, which seems to reliably estimate brain volume. (orig.)

  7. Evaluating anorexia-related brain atrophy using MP2RAGE-based morphometry

    Energy Technology Data Exchange (ETDEWEB)

    Boto, Jose; Loevblad, Karl-Olof; Vargas, Maria Isabel [Geneva University Hospital (Switzerland). Div. of Neuroradiology and Faculty of Medicine of Geneva; Gkinis, Georgios; Ortiz, Nadia [Geneva University Hospital (Switzerland). Dept. of Mental Health and Psychiatry; Roche, Alexis; Kober, Tobias; Marechal, Benedicte [Siemens Healthcare HC CEMEA SUI DI BM PI, Lausanne (Switzerland). Siemens ACIT, Advanced Clinical Imaging Technology; University Hospital (CHUV), Lausanne (Switzerland). Dept. of Radiology; Ecole Polytechnique Federale de Lausanne (Switzerland). LTS5; Lazeyras, Francois [Geneva University Hospital (Switzerland). Div. of Radiology and Faculty of Medicine of Geneva

    2017-12-15

    To evaluate brain atrophy in anorexic patients by automated cerebral segmentation with the magnetization-prepared 2 rapid acquisition gradient echo (MP2RAGE) MRI sequence. Twenty patients (female; mean age, 27.9 years), presenting consecutively for brain MRI between August 2014-December 2016 with clinical suspicion of anorexia nervosa and BMI<18.5 kg/m{sup 2} were included. Controls were ten healthy females (mean age, 26.5 years). Automated brain morphometry was performed based on MP2RAGE. Means of morphometric results in the two groups were compared and correlation with BMI was analysed. Significantly lower volumes of total brain, grey matter (GM), white matter (WM), cerebellum and insula were found in anorexic patients. Anorexics had higher volumes of CSF, ventricles, lateral ventricles and third ventricle. When adjusted means for weight and height were compared, the volume of WM and cerebellum were not significantly different. However, volume of WM was significantly affected by weight and positively correlated with BMI. Significant positive correlations were found between BMI and volumes of total brain, GM, cortical GM and WM. BMI was negatively correlated with volumes of CSF and third ventricle. Brain atrophy was demonstrated in anorexic patients with MP2RAGE-based automated segmentation, which seems to reliably estimate brain volume. (orig.)

  8. Observable Signatures of Wind-driven Chemistry with a Fully Consistent Three-dimensional Radiative Hydrodynamics Model of HD 209458b

    Science.gov (United States)

    Drummond, B.; Mayne, N. J.; Manners, J.; Carter, A. L.; Boutle, I. A.; Baraffe, I.; Hébrard, É.; Tremblin, P.; Sing, D. K.; Amundsen, D. S.; Acreman, D.

    2018-03-01

    We present a study of the effect of wind-driven advection on the chemical composition of hot-Jupiter atmospheres using a fully consistent 3D hydrodynamics, chemistry, and radiative transfer code, the Met Office Unified Model (UM). Chemical modeling of exoplanet atmospheres has primarily been restricted to 1D models that cannot account for 3D dynamical processes. In this work, we couple a chemical relaxation scheme to the UM to account for the chemical interconversion of methane and carbon monoxide. This is done consistently with the radiative transfer meaning that departures from chemical equilibrium are included in the heating rates (and emission) and hence complete the feedback between the dynamics, thermal structure, and chemical composition. In this Letter, we simulate the well studied atmosphere of HD 209458b. We find that the combined effect of horizontal and vertical advection leads to an increase in the methane abundance by several orders of magnitude, which is directly opposite to the trend found in previous works. Our results demonstrate the need to include 3D effects when considering the chemistry of hot-Jupiter atmospheres. We calculate transmission and emission spectra, as well as the emission phase curve, from our simulations. We conclude that gas-phase nonequilibrium chemistry is unlikely to explain the model–observation discrepancy in the 4.5 μm Spitzer/IRAC channel. However, we highlight other spectral regions, observable with the James Webb Space Telescope, where signatures of wind-driven chemistry are more prominant.

  9. Validation of comprehensive space radiation transport code

    International Nuclear Information System (INIS)

    Shinn, J.L.; Simonsen, L.C.; Cucinotta, F.A.

    1998-01-01

    The HZETRN code has been developed over the past decade to evaluate the local radiation fields within sensitive materials on spacecraft in the space environment. Most of the more important nuclear and atomic processes are now modeled and evaluation within a complex spacecraft geometry with differing material components, including transition effects across boundaries of dissimilar materials, are included. The atomic/nuclear database and transport procedures have received limited validation in laboratory testing with high energy ion beams. The codes have been applied in design of the SAGE-III instrument resulting in material changes to control injurious neutron production, in the study of the Space Shuttle single event upsets, and in validation with space measurements (particle telescopes, tissue equivalent proportional counters, CR-39) on Shuttle and Mir. The present paper reviews the code development and presents recent results in laboratory and space flight validation

  10. The S100P/RAGE signaling pathway regulates expression of microRNA-21 in colon cancer cells.

    Science.gov (United States)

    Mercado-Pimentel, Melania E; Onyeagucha, Benjamin C; Li, Qing; Pimentel, Angel C; Jandova, Jana; Nelson, Mark A

    2015-08-19

    S100P signaling through the receptor for advanced glycation end-products (RAGE) contributes to colon cancer invasion and metastasis, but the mechanistic features of this process are obscure. Here, we investigate whether activation of S100P/RAGE signaling regulates oncogenic microRNA-21 (miR-21). We show that exogenous S100P up-regulates miR-21 levels in human colon cancer cells, whereas knockdown of S100P results in a decrease of miR-21. Furthermore, blockage of RAGE with anti-RAGE antibody suppresses S100P induction of miR-21. In addition, we found that S100P induction of miR-21 expression involves ERK and is suppressed by the MEK inhibitor U0126. Also, S100P treatment stimulates the enrichment of c-Fos, and AP-1 family members, at the miR-21 gene promoter. Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

  11. Microalbuminuria and sRAGE in High-Risk Hypertensive Patients Treated with Nifedipine/Telmisartan Combination Treatment: A Substudy of TALENT

    Directory of Open Access Journals (Sweden)

    Colomba Falcone

    2012-01-01

    Full Text Available Some antihypertensive drugs have also renoprotective and anti-inflammatory properties that go beyond their effect on blood pressure. It has been suggested that microalbuminuria and glomerular filtration rate (GFR are associated with circulating levels of the soluble form of the receptor, sRAGE (soluble receptor for advanced glycation ends-products. In the present analysis, we used data from the TALENT study to evaluate soluble receptor for advanced glycation end-products (sRAGE plasma levels in patients with hypertension and high-cardiovascular risk-treated nifedipine and telmisartan in combination. Treatment with nifedipine-telmisartan significantly decreased mean systolic and diastolic ambulatory blood pressure and resulted in a significant increase in sRAGE plasma concentrations after 24 weeks of therapy. We concluded that in hypertensive patients with early-stage renal disease, sRAGE concentrations are not influenced by either microalbuminuria or GFR. Long-term treatment with a combination of nifedipine-telmisartan may have a beneficial effect increasing sRAGE plasma levels, thus exerting an atheroprotective and anti-inflammatory activity.

  12. Radiation transport phenomena and modeling. Part A: Codes; Part B: Applications with examples

    International Nuclear Information System (INIS)

    Lorence, L.J. Jr.; Beutler, D.E.

    1997-09-01

    This report contains the notes from the second session of the 1997 IEEE Nuclear and Space Radiation Effects Conference Short Course on Applying Computer Simulation Tools to Radiation Effects Problems. Part A discusses the physical phenomena modeled in radiation transport codes and various types of algorithmic implementations. Part B gives examples of how these codes can be used to design experiments whose results can be easily analyzed and describes how to calculate quantities of interest for electronic devices

  13. Computer codes for problems of isotope and radiation research

    International Nuclear Information System (INIS)

    Remer, M.

    1986-12-01

    A survey is given of computer codes for problems in isotope and radiation research. Altogether 44 codes are described as titles with abstracts. 17 of them are in the INIS scope and are processed individually. The subjects are indicated in the chapter headings: 1) analysis of tracer experiments, 2) spectrum calculations, 3) calculations of ion and electron trajectories, 4) evaluation of gamma irradiation plants, and 5) general software

  14. Radiation protection code of practice in academic and research institutes

    International Nuclear Information System (INIS)

    Abdalla, A. A. M.

    2010-05-01

    The main aim of this study was to establish a code of practice on radiation protection for safe control of radiation sources used in academic and research institutes, another aim of this study was to assess the current situation of radiation protection in some of the academic and research institutes.To achieve the aims of this study, a draft of a code of practice has been developed which is based on international and local relevant recommendation. The developed code includes the following main issues: regulatory responsibilities, radiation protection program and design of radiation installations. The second aim had been accomplished by conducting inspection visits to five (A, B, C, D and E) academic and to four (F, G, H and I ) research institutes. Eight of such institutes are located in Khartoum State and the ninth one is in Madani city (Aljazeera State). The inspection activities have been carried out using a standard inspection check list developed by the regulatory authority of the Sudan. The inspection missions to the above mentioned institutes involved also evaluation of radiation levels around the premises and storage areas of radiation sources. The dose rate measurement around radiation sources locations were found to be quite low. This mainly is due to the fact that the activities of most radionuclides that are used in these institutes are quite low ( in the range of micro curies). Also ,most the x-ray machines that were found in use for scientific academic and research purposes work at low k Vp of maximum 60 k Vp. None of the radiation workers in the inspected institutes has a personal radiation monitoring device, therefor staff dose levels have not been assessed. However it was noted that in most of the academic/ research studies radiation workers are only exposed to very low levels of radiation and for a very short time that dose not exceed 1 minute, therefore the expected occupational exposure of the staff is very low. Radiation measurement in public

  15. Systemic levels of the anti-inflammatory decoy receptor soluble RAGE (receptor for advanced glycation end products) are decreased in dogs with inflammatory bowel disease.

    Science.gov (United States)

    Heilmann, Romy M; Otoni, Cristiane C; Jergens, Albert E; Grützner, Niels; Suchodolski, Jan S; Steiner, Jörg M

    2014-10-15

    Inflammatory bowel disease (IBD) is a common condition in dogs, and a dysregulated innate immunity is believed to play a major role in its pathogenesis. S100A12 is an endogenous damage-associated molecular pattern molecule, which is involved in phagocyte activation and is increased in serum/fecal samples from dogs with IBD. S100A12 binds to the receptor of advanced glycation end products (RAGE), a pattern-recognition receptor, and results of studies in human patients with IBD and other conditions suggest a role of RAGE in chronic inflammation. Soluble RAGE (sRAGE), a decoy receptor for inflammatory proteins (e.g., S100A12) that appears to function as an anti-inflammatory molecule, was shown to be decreased in human IBD patients. This study aimed to evaluate serum sRAGE and serum/fecal S100A12 concentrations in dogs with IBD. Serum and fecal samples were collected from 20 dogs with IBD before and after initiation of medical treatment and from 15 healthy control dogs. Serum sRAGE and serum and fecal S100A12 concentrations were measured by ELISA, and were compared between dogs with IBD and healthy controls, and between dogs with a positive outcome (i.e., clinical remission, n=13) and those that were euthanized (n=6). The relationship of serum sRAGE concentrations with clinical disease activity (using the CIBDAI scoring system), serum and fecal S100A12 concentrations, and histologic disease severity (using a 4-point semi-quantitative grading system) was tested. Serum sRAGE concentrations were significantly lower in dogs with IBD than in healthy controls (p=0.0003), but were not correlated with the severity of histologic lesions (p=0.4241), the CIBDAI score before (p=0.0967) or after treatment (p=0.1067), the serum S100A12 concentration before (p=0.9214) and after treatment (p=0.4411), or with the individual outcome (p=0.4066). Clinical remission and the change in serum sRAGE concentration after treatment were not significantly associated (p=0.5727); however, serum sRAGE

  16. Prototype demonstration of radiation therapy planning code system

    International Nuclear Information System (INIS)

    Little, R.C.; Adams, K.J.; Estes, G.P.; Hughes, L.S. III; Waters, L.S.

    1996-01-01

    This is the final report of a one-year, Laboratory-Directed Research and Development project at the Los Alamos National Laboratory (LANL). Radiation therapy planning is the process by which a radiation oncologist plans a treatment protocol for a patient preparing to undergo radiation therapy. The objective is to develop a protocol that delivers sufficient radiation dose to the entire tumor volume, while minimizing dose to healthy tissue. Radiation therapy planning, as currently practiced in the field, suffers from inaccuracies made in modeling patient anatomy and radiation transport. This project investigated the ability to automatically model patient-specific, three-dimensional (3-D) geometries in advanced Los Alamos radiation transport codes (such as MCNP), and to efficiently generate accurate radiation dose profiles in these geometries via sophisticated physics modeling. Modem scientific visualization techniques were utilized. The long-term goal is that such a system could be used by a non-expert in a distributed computing environment to help plan the treatment protocol for any candidate radiation source. The improved accuracy offered by such a system promises increased efficacy and reduced costs for this important aspect of health care

  17. Academic Training - The use of Monte Carlo radiation transport codes in radiation physics and dosimetry

    CERN Multimedia

    Françoise Benz

    2006-01-01

    2005-2006 ACADEMIC TRAINING PROGRAMME LECTURE SERIES 27, 28, 29 June 11:00-12:00 - TH Conference Room, bldg. 4 The use of Monte Carlo radiation transport codes in radiation physics and dosimetry F. Salvat Gavalda,Univ. de Barcelona, A. FERRARI, CERN-AB, M. SILARI, CERN-SC Lecture 1. Transport and interaction of electromagnetic radiation F. Salvat Gavalda,Univ. de Barcelona Interaction models and simulation schemes implemented in modern Monte Carlo codes for the simulation of coupled electron-photon transport will be briefly reviewed. Different schemes for simulating electron transport will be discussed. Condensed algorithms, which rely on multiple-scattering theories, are comparatively fast, but less accurate than mixed algorithms, in which hard interactions (with energy loss or angular deflection larger than certain cut-off values) are simulated individually. The reliability, and limitations, of electron-interaction models and multiple-scattering theories will be analyzed. Benchmark comparisons of simu...

  18. 3D Realistic Radiative Hydrodynamic Modeling of a Moderate-Mass Star: Effects of Rotation

    Science.gov (United States)

    Kitiashvili, Irina; Kosovichev, Alexander G.; Mansour, Nagi N.; Wray, Alan A.

    2018-01-01

    Recent progress in stellar observations opens new perspectives in understanding stellar evolution and structure. However, complex interactions in the turbulent radiating plasma together with effects of magnetic fields and rotation make inferences of stellar properties uncertain. The standard 1D mixing-length-based evolutionary models are not able to capture many physical processes of stellar interior dynamics, but they provide an initial approximation of the stellar structure that can be used to initialize 3D time-dependent radiative hydrodynamics simulations, based on first physical principles, that take into account the effects of turbulence, radiation, and others. In this presentation we will show simulation results from a 3D realistic modeling of an F-type main-sequence star with mass 1.47 Msun, in which the computational domain includes the upper layers of the radiation zone, the entire convection zone, and the photosphere. The simulation results provide new insight into the formation and properties of the convective overshoot region, the dynamics of the near-surface, highly turbulent layer, the structure and dynamics of granulation, and the excitation of acoustic and gravity oscillations. We will discuss the thermodynamic structure, oscillations, and effects of rotation on the dynamics of the star across these layers.

  19. Study and application of Dot 3.5 computer code in radiation shielding problems

    International Nuclear Information System (INIS)

    Otto, A.C.; Mendonca, A.G.; Maiorino, J.R.

    1983-01-01

    The application of nuclear transportation code S sub(N), Dot 3.5, to radiation shielding problems is revised. Aiming to study the better available option (convergence scheme, calculation mode), of DOT 3.5 computer code to be applied in radiation shielding problems, a standard model from 'Argonne Code Center' was selected and a combination of several calculation options to evaluate the accuracy of the results and the computational time was used, for then to select the more efficient option. To illustrate the versatility and efficacy in the application of the code for tipical shielding problems, the streaming neutrons calculation along a sodium coolant channel is ilustrated. (E.G.) [pt

  20. Code of practice on radiation protection in the mining and milling of radioactive ores 1987

    International Nuclear Information System (INIS)

    1987-01-01

    This Code was formulated under provisions of the Environment Protection (Nuclear Codes) Act 1978 in close consultation with the Governments of the States and the Northern Territory. It is a major revision of the Code of Practice on Radiation Protection in the Mining and Milling of Radioactive Ores (1980), incorporating changes flowing from advances in internationally agreed radiation protection philosophy, and experience gained in Australia in uranium mining and milling operations and the extraction of monazite from mineral sands. The Code specifies the standards, practices, procedures, and measures to prevent or limit risk to employees and to the public from uranium mining and milling, mineral sands operations and extraction of radioactive ores. To assist the industry in meeting the requirements and responsibilities imposed by the Code, guidelines to the former Code will be reviewed and, if appropriate, revised. New guidelines to assist compliance with changed requirements will also be prepared. The Act provides for the revision of codes of practice. The Code of Practice on Radiation Protection in the Mining and Milling of Radioactive Ores (1987) will be reviewed from time to time and revised if necessary to ensure that the highest standards of radiation protection in the mining and milling of radioactive ores are maintained

  1. Code of practice on radiation protection in the mining and milling of radioactive ores 1987

    Energy Technology Data Exchange (ETDEWEB)

    1987-01-01

    This Code was formulated under provisions of the Environment Protection (Nuclear Codes) Act 1978 in close consultation with the Governments of the States and the Northern Territory. It is a major revision of the Code of Practice on Radiation Protection in the Mining and Milling of Radioactive Ores (1980), incorporating changes flowing from advances in internationally agreed radiation protection philosophy, and experience gained in Australia in uranium mining and milling operations and the extraction of monazite from mineral sands. The Code specifies the standards, practices, procedures, and measures to prevent or limit risk to employees and to the public from uranium mining and milling, mineral sands operations and extraction of radioactive ores. To assist the industry in meeting the requirements and responsibilities imposed by the Code, guidelines to the former Code will be reviewed and, if appropriate, revised. New guidelines to assist compliance with changed requirements will also be prepared. The Act provides for the revision of codes of practice. The Code of Practice on Radiation Protection in the Mining and Milling of Radioactive Ores (1987) will be reviewed from time to time and revised if necessary to ensure that the highest standards of radiation protection in the mining and milling of radioactive ores are maintained.

  2. Relativistic viscous hydrodynamics for heavy-ion collisions with ECHO-QGP

    CERN Document Server

    Del Zanna, L; Inghirami, G; Rolando, V; Beraudo, A; De Pace, A; Pagliara, G; Drago, A; Becattini, F

    2013-01-01

    We present ECHO-QGP, a numerical code for $(3+1)$-dimensional relativistic viscous hydrodynamics designed for the modeling of the space-time evolution of the matter created in high energy nuclear collisions. The code has been built on top of the \\emph{Eulerian Conservative High-Order} astrophysical code for general relativistic magneto-hydrodynamics [\\emph{Del Zanna et al., Astron. Astrophys. 473, 11, 2007}] and here it has been upgraded to handle the physics of the Quark-Gluon Plasma. ECHO-QGP features second-order treatment of causal relativistic viscosity effects in both Minkowskian or Bjorken coordinates; partial or complete chemical equilibrium of hadronic species before kinetic freeze-out; initial conditions based on the optical Glauber model, including a Monte-Carlo routine for event-by-event fluctuating initial conditions; a freeze-out procedure based on the Cooper-Frye prescription. The code is extensively validated against several test problems and results always appear accurate, as guaranteed by th...

  3. EFFECTS OF DIFFERENT NUMERICAL INTERFACE METHODS ON HYDRODYNAMICS INSTABILITY

    Energy Technology Data Exchange (ETDEWEB)

    FRANCOIS, MARIANNE M. [Los Alamos National Laboratory; DENDY, EDWARD D. [Los Alamos National Laboratory; LOWRIE, ROBERT B. [Los Alamos National Laboratory; LIVESCU, DANIEL [Los Alamos National Laboratory; STEINKAMP, MICHAEL J. [Los Alamos National Laboratory

    2007-01-11

    The authors compare the effects of different numerical schemes for the advection and material interface treatments on the single-mode Rayleigh-Taylor instability, using the RAGE hydro-code. The interface growth and its surface density (interfacial area) versus time are investigated. The surface density metric shows to be better suited to characterize the difference in the flow, than the conventional interface growth metric. They have found that Van Leer's limiter combined to no interface treatment leads to the largest surface area. Finally, to quantify the difference between the numerical methods they have estimated the numerical viscosity in the linear-regime at different scales.

  4. Code of practice for the safe use of ionizing radiation in secondary schools (1986)

    International Nuclear Information System (INIS)

    1987-01-01

    The code of practice is intended for schools and indicates the basic philosophy behind the current approach to the control of hazards associated with the use of ionizing radiation. The purpose of this code is to provide guidance on safe and proper practices in the use of radiation. It covers modes of radiation exposure, shielding, dose limits, responsibility, general rules, x-ray generators, general control of radioactive sources, sealed sources and unsealed sources

  5. The use of the SRIM code for calculation of radiation damage induced by neutrons

    Science.gov (United States)

    Mohammadi, A.; Hamidi, S.; Asadabad, Mohsen Asadi

    2017-12-01

    Materials subjected to neutron irradiation will being evolve to structural changes by the displacement cascades initiated by nuclear reaction. This study discusses a methodology to compute primary knock-on atoms or PKAs information that lead to radiation damage. A program AMTRACK has been developed for assessing of the PKAs information. This software determines the specifications of recoil atoms (using PTRAC card of MCNPX code) and also the kinematics of interactions. The deterministic method was used for verification of the results of (MCNPX+AMTRACK). The SRIM (formely TRIM) code is capable to compute neutron radiation damage. The PKAs information was extracted by AMTRACK program, which can be used as an input of SRIM codes for systematic analysis of primary radiation damage. Then the Bushehr Nuclear Power Plant (BNPP) radiation damage on reactor pressure vessel is calculated.

  6. Gamma-Ray Burst Dynamics and Afterglow Radiation from Adaptive Mesh Refinement, Special Relativistic Hydrodynamic Simulations

    Science.gov (United States)

    De Colle, Fabio; Granot, Jonathan; López-Cámara, Diego; Ramirez-Ruiz, Enrico

    2012-02-01

    We report on the development of Mezcal-SRHD, a new adaptive mesh refinement, special relativistic hydrodynamics (SRHD) code, developed with the aim of studying the highly relativistic flows in gamma-ray burst sources. The SRHD equations are solved using finite-volume conservative solvers, with second-order interpolation in space and time. The correct implementation of the algorithms is verified by one-dimensional (1D) and multi-dimensional tests. The code is then applied to study the propagation of 1D spherical impulsive blast waves expanding in a stratified medium with ρvpropr -k , bridging between the relativistic and Newtonian phases (which are described by the Blandford-McKee and Sedov-Taylor self-similar solutions, respectively), as well as to a two-dimensional (2D) cylindrically symmetric impulsive jet propagating in a constant density medium. It is shown that the deceleration to nonrelativistic speeds in one dimension occurs on scales significantly larger than the Sedov length. This transition is further delayed with respect to the Sedov length as the degree of stratification of the ambient medium is increased. This result, together with the scaling of position, Lorentz factor, and the shock velocity as a function of time and shock radius, is explained here using a simple analytical model based on energy conservation. The method used for calculating the afterglow radiation by post-processing the results of the simulations is described in detail. The light curves computed using the results of 1D numerical simulations during the relativistic stage correctly reproduce those calculated assuming the self-similar Blandford-McKee solution for the evolution of the flow. The jet dynamics from our 2D simulations and the resulting afterglow light curves, including the jet break, are in good agreement with those presented in previous works. Finally, we show how the details of the dynamics critically depend on properly resolving the structure of the relativistic flow.

  7. GAMMA-RAY BURST DYNAMICS AND AFTERGLOW RADIATION FROM ADAPTIVE MESH REFINEMENT, SPECIAL RELATIVISTIC HYDRODYNAMIC SIMULATIONS

    International Nuclear Information System (INIS)

    De Colle, Fabio; Ramirez-Ruiz, Enrico; Granot, Jonathan; López-Cámara, Diego

    2012-01-01

    We report on the development of Mezcal-SRHD, a new adaptive mesh refinement, special relativistic hydrodynamics (SRHD) code, developed with the aim of studying the highly relativistic flows in gamma-ray burst sources. The SRHD equations are solved using finite-volume conservative solvers, with second-order interpolation in space and time. The correct implementation of the algorithms is verified by one-dimensional (1D) and multi-dimensional tests. The code is then applied to study the propagation of 1D spherical impulsive blast waves expanding in a stratified medium with ρ∝r –k , bridging between the relativistic and Newtonian phases (which are described by the Blandford-McKee and Sedov-Taylor self-similar solutions, respectively), as well as to a two-dimensional (2D) cylindrically symmetric impulsive jet propagating in a constant density medium. It is shown that the deceleration to nonrelativistic speeds in one dimension occurs on scales significantly larger than the Sedov length. This transition is further delayed with respect to the Sedov length as the degree of stratification of the ambient medium is increased. This result, together with the scaling of position, Lorentz factor, and the shock velocity as a function of time and shock radius, is explained here using a simple analytical model based on energy conservation. The method used for calculating the afterglow radiation by post-processing the results of the simulations is described in detail. The light curves computed using the results of 1D numerical simulations during the relativistic stage correctly reproduce those calculated assuming the self-similar Blandford-McKee solution for the evolution of the flow. The jet dynamics from our 2D simulations and the resulting afterglow light curves, including the jet break, are in good agreement with those presented in previous works. Finally, we show how the details of the dynamics critically depend on properly resolving the structure of the relativistic flow.

  8. GAMMA-RAY BURST DYNAMICS AND AFTERGLOW RADIATION FROM ADAPTIVE MESH REFINEMENT, SPECIAL RELATIVISTIC HYDRODYNAMIC SIMULATIONS

    Energy Technology Data Exchange (ETDEWEB)

    De Colle, Fabio; Ramirez-Ruiz, Enrico [Astronomy and Astrophysics Department, University of California, Santa Cruz, CA 95064 (United States); Granot, Jonathan [Racah Institute of Physics, Hebrew University, Jerusalem 91904 (Israel); Lopez-Camara, Diego [Instituto de Ciencias Nucleares, Universidad Nacional Autonoma de Mexico, Ap. 70-543, 04510 D.F. (Mexico)

    2012-02-20

    We report on the development of Mezcal-SRHD, a new adaptive mesh refinement, special relativistic hydrodynamics (SRHD) code, developed with the aim of studying the highly relativistic flows in gamma-ray burst sources. The SRHD equations are solved using finite-volume conservative solvers, with second-order interpolation in space and time. The correct implementation of the algorithms is verified by one-dimensional (1D) and multi-dimensional tests. The code is then applied to study the propagation of 1D spherical impulsive blast waves expanding in a stratified medium with {rho}{proportional_to}r{sup -k}, bridging between the relativistic and Newtonian phases (which are described by the Blandford-McKee and Sedov-Taylor self-similar solutions, respectively), as well as to a two-dimensional (2D) cylindrically symmetric impulsive jet propagating in a constant density medium. It is shown that the deceleration to nonrelativistic speeds in one dimension occurs on scales significantly larger than the Sedov length. This transition is further delayed with respect to the Sedov length as the degree of stratification of the ambient medium is increased. This result, together with the scaling of position, Lorentz factor, and the shock velocity as a function of time and shock radius, is explained here using a simple analytical model based on energy conservation. The method used for calculating the afterglow radiation by post-processing the results of the simulations is described in detail. The light curves computed using the results of 1D numerical simulations during the relativistic stage correctly reproduce those calculated assuming the self-similar Blandford-McKee solution for the evolution of the flow. The jet dynamics from our 2D simulations and the resulting afterglow light curves, including the jet break, are in good agreement with those presented in previous works. Finally, we show how the details of the dynamics critically depend on properly resolving the structure of the

  9. Soluble receptor for advanced glycation end products (sRAGE) and ...

    African Journals Online (AJOL)

    Egyptian Journal of Medical Human Genetics ... Patients with disease duration less than 5 years, connective tissue disease, liver dysfunction, or apparent cardiovascular disease and those on lipid lowering ... Laboratory investigations included; HbA1c%, urinary albumin excretion (UAE), fasting lipid profile and sRAGE.

  10. The gravitational interaction between N-body (star clusters) and hydrodynamic (ISM) codes in disk galaxy simulations

    International Nuclear Information System (INIS)

    Schroeder, M.C.; Comins, N.F.

    1986-01-01

    During the past twenty years, three approaches to numerical simulations of the evolution of galaxies have been developed. The first approach, N-body programs, models the motion of clusters of stars as point particles which interact via their gravitational potentials to determine the system dynamics. Some N-body codes model molecular clouds as colliding, inelastic particles. The second approach, hydrodynamic models of galactic dynamics, simulates the activity of the interstellar medium as a compressible gas. These models presently do not include stars, the effect of gravitational fields, or allow for stellar evolution and exchange of mass or angular momentum between stars and the interstellar medium. The third approach, stochastic star formation simulations of disk galaxies, allows for the interaction between stars and interstellar gas, but does not allow the star particles to move under the influence of gravity

  11. Relativistic, Viscous, Radiation Hydrodynamic Simulations of Geometrically Thin Disks. I. Thermal and Other Instabilities

    Science.gov (United States)

    Fragile, P. Chris; Etheridge, Sarina M.; Anninos, Peter; Mishra, Bhupendra; Kluźniak, Włodek

    2018-04-01

    We present results from two-dimensional, general relativistic, viscous, radiation hydrodynamic numerical simulations of Shakura–Sunyaev thin disks accreting onto stellar-mass Schwarzschild black holes. We consider cases on both the gas- and radiation-pressure-dominated branches of the thermal equilibrium curve, with mass accretion rates spanning the range from \\dot{M}=0.01{L}Edd}/{c}2 to 10L Edd/c 2. The simulations directly test the stability of this standard disk model on the different branches. We find clear evidence of thermal instability for all radiation-pressure-dominated disks, resulting universally in the vertical collapse of the disks, which in some cases then settle onto the stable, gas-pressure-dominated branch. Although these results are consistent with decades-old theoretical predictions, they appear to be in conflict with available observational data from black hole X-ray binaries. We also find evidence for a radiation-pressure-driven instability that breaks the unstable disks up into alternating rings of high and low surface density on a timescale comparable to the thermal collapse. Since radiation is included self-consistently in the simulations, we are able to calculate light curves and power density spectra (PDS). For the most part, we measure radiative efficiencies (ratio of luminosity to mass accretion rate) close to 6%, as expected for a nonrotating black hole. The PDS appear as broken power laws, with a break typically around 100 Hz. There is no evidence of significant excess power at any frequencies, i.e., no quasi-periodic oscillations are observed.

  12. Reduced soluble receptor for advanced glycation end-products (sRAGE) scavenger capacity precedes pre-eclampsia in Type 1 diabetes

    Science.gov (United States)

    Yu, Y; Hanssen, KF; Kalyanaraman, V; Chirindel, A; Jenkins, AJ; Nankervis, AJ; Torjesen, PA; Scholz, H; Henriksen, T; Lorentzen, B; Garg, SK; Menard, MK; Hammad, SM; Scardo, JA; Stanley, JR; Wu, M; Basu, A; Aston, CE; Lyons, TJ

    2014-01-01

    Objective Increased advanced glycation end-products (AGEs) and their soluble receptors (sRAGE) have been implicated in the pathogenesis of pre-eclampsia (PE). However, this association has not been elucidated in pregnancies complicated by diabetes. We aimed to investigate the serum levels of these factors in pregnant women with Type 1 diabetes mellitus (T1DM), a condition associated with a four-fold increase in PE. Design Prospective study in women with T1DM at 12.2 ± 1.9, 21.6 ± 1.5 and 31.5 ± 1.7 weeks of gestation [mean ± standard deviation (SD); no overlap] before PE onset. Setting Antenatal clinics. Population Pregnant women with T1DM (n = 118; 26 developed PE) and healthy nondiabetic pregnant controls (n = 21). Methods Maternal serum levels of sRAGE (total circulating pool), Nε-(carboxymethyl)lysine (CML), hydroimidazolone (methylglyoxal-modified proteins) and total AGEs were measured by immunoassays. Main outcome measures Serum sRAGE and AGEs in pregnant women with T1DM who subsequently developed PE (DM PE+) versus those who remained normotensive (DM PE–). Results In DM PE+ versus DM PE–, sRAGE was significantly lower in the first and second trimesters, prior to the clinical manifestation of PE (P diabetes, parity and mean arterial pressure as covariates. Conclusions In the early stages of pregnancy, lower circulating sRAGE levels, and the ratio of sRAGE to AGEs, may be associated with the subsequent development of PE in women with T1DM. PMID:22900949

  13. Soluble receptor for advanced glycation end products (sRAGE) and ...

    African Journals Online (AJOL)

    Eman M. Sherif

    2014-07-10

    Jul 10, 2014 ... other metabolites such as methylglyoxal. AGEs formation in ... Patients were further subdivided into two groups according to the presence of microvascular complications; Group I: ... variables using independent t-test in cases of two independent .... between sRAGE and SBP were only detected in controls.

  14. CT dosimetry computer codes: Their influence on radiation dose estimates and the necessity for their revision under new ICRP radiation protection standards

    International Nuclear Information System (INIS)

    Kim, K. P.; Lee, J.; Bolch, W. E.

    2011-01-01

    Computed tomography (CT) dosimetry computer codes have been most commonly used due to their user friendliness, but with little consideration for potential uncertainty in estimated organ dose and their underlying limitations. Generally, radiation doses calculated with different CT dosimetry computer codes were comparable, although relatively large differences were observed for some specific organs or tissues. The largest difference in radiation doses calculated using different computer codes was observed for Siemens Sensation CT scanners. Radiation doses varied with patient age and sex. Younger patients and adult females receive a higher radiation dose in general than adult males for the same CT technique factors. There are a number of limitations of current CT dosimetry computer codes. These include unrealistic modelling of the human anatomy, a limited number of organs and tissues for dose calculation, inability to alter patient height and weight, and non-applicability to new CT technologies. Therefore, further studies are needed to overcome these limitations and to improve CT dosimetry. (authors)

  15. Activation of the HMGB1-RAGE axis upregulates TH expression in dopaminergic neurons via JNK phosphorylation.

    Science.gov (United States)

    Kim, Soo Jeong; Ryu, Min Jeong; Han, Jeongsu; Jang, Yunseon; Kim, Jungim; Lee, Min Joung; Ryu, Ilhwan; Ju, Xianshu; Oh, Eungseok; Chung, Woosuk; Kweon, Gi Ryang; Heo, Jun Young

    2017-11-04

    The derangement of tyrosine hydroxylase (TH) activity reduces dopamine synthesis and is implicated in the pathogenesis of Parkinson's disease. However, the extracellular modulator and intracellular regulatory mechanisms of TH have yet to be identified. Recently, high-mobility group box 1 (HMGB1) was reported to be actively secreted from glial cells and is regarded as a mediator of dopaminergic neuronal loss. However, the mechanism for how HMGB1 affects TH expression, particularly through the receptor for advanced glycation endproducts (RAGE), has not yet been investigated. We found that recombinant HMGB1 (rHMGB1) upregulates TH mRNA expression via simultaneous activation of JNK phosphorylation, and this induction of TH expression is blocked by inhibitors of RAGE and JNK. To investigate how TH expression levels change through the HMGB1-RAGE axis as a result of MPP + toxicity, we co-treated SN4741 dopaminergic cells with MPP + and rHMGB1. rHMGB1 blocked the reduction of TH mRNA following MPP + treatment without altering cell survival rates. Our results suggest that HMGB1 upregulates TH expression to maintain dopaminergic neuronal function via activating RAGE, which is dependent on JNK phosphorylation. Copyright © 2017 Elsevier Inc. All rights reserved.

  16. SEURAT: SPH scheme extended with ultraviolet line radiative transfer

    Science.gov (United States)

    Abe, Makito; Suzuki, Hiroyuki; Hasegawa, Kenji; Semelin, Benoit; Yajima, Hidenobu; Umemura, Masayuki

    2018-05-01

    We present a novel Lyman alpha (Ly α) radiative transfer code, SEURAT (SPH scheme Extended with Ultraviolet line RAdiative Transfer), where line scatterings are solved adaptively with the resolution of the smoothed particle hydrodynamics (SPH). The radiative transfer method implemented in SEURAT is based on a Monte Carlo algorithm in which the scattering and absorption by dust are also incorporated. We perform standard test calculations to verify the validity of the code; (i) emergent spectra from a static uniform sphere, (ii) emergent spectra from an expanding uniform sphere, and (iii) escape fraction from a dusty slab. Thereby, we demonstrate that our code solves the {Ly} α radiative transfer with sufficient accuracy. We emphasize that SEURAT can treat the transfer of {Ly} α photons even in highly complex systems that have significantly inhomogeneous density fields. The high adaptivity of SEURAT is desirable to solve the propagation of {Ly} α photons in the interstellar medium of young star-forming galaxies like {Ly} α emitters (LAEs). Thus, SEURAT provides a powerful tool to model the emergent spectra of {Ly} α emission, which can be compared to the observations of LAEs.

  17. Simplified hydrodynamic model of hydrogen-flame propagation in reactor vessels

    International Nuclear Information System (INIS)

    Baer, M.R.; Ratzel, A.C.

    1983-01-01

    The model is consistent with the theory of slow combustion in which the gasdynamic field equations are treated in the limit of small Mach numbers. To the lowest order, pressure is spatially uniform. The flame is treated as a density and entropy discontinuity which propagates at prescribed burning velocities, corresponding to laminar or turbulent flames. Radiation cooling of the burned combustion gases and possible preheating of the unburned gases during propagation of the flame is included using a molecular gas-band thermal radiation model. Application of this model has been developed for 1-D variable-area flame propagation. Multidimensional effects induced by hydrodynamics and buoyancy are corrected for. This model of flame propagation reduces to differential equations which describes the temporal variations of vessel pressure, burned volume and gas entropy. The thermodynamic state of the burned gas immediately following the flame is determined using an isobaric Hugoniot relation. At other locations the burned-gas thermodynamic states are determined using a Lagrangian particle tracking method. Results of a computer code using the method are presented. 11 figures

  18. Analysis of radiation field distribution in Yonggwang unit 3 with MCNP code

    International Nuclear Information System (INIS)

    Lee, Cheol Woo; Ha, Wi Ho; Shin, Chang Ho; Kim, Soon Young; Kim, Jong Kyung

    2004-01-01

    Radiation field analysis is performed at the inside of the containment building of nuclear power plant(NPP) using the well-known MCNP code. The target NPP in this study is Yonggwang Unit 3 Cycle 8. In this work, whole transport calculations were done using MCNPX 2.4.0 due to the functional benefits, such as Mesh Tally, that the code provides. The neutron spectra released from the operating reactor core were firstly evaluated as a radiation source term, and then dose distributions in the work areas of the NPP were calculated

  19. Equations of radiation hydrodynamics

    International Nuclear Information System (INIS)

    Mihalas, D.

    1982-01-01

    The purpose of this paper is to give an overview of the role of radiation in the transport of energy and momentum in a combined matter-radiation fluid. The transport equation for a moving radiating fluid is presented in both a fully Eulerian and a fully Lagrangian formulation, along with conservation equations describing the dynamics of the fluid. Special attention is paid to the problem of deriving equations that are mutually consistent in each frame, and between frames, to 0(v/c). A detailed analysis is made to show that in situations of broad interest, terms that are formally of 0(v/c) actually dominate the solution, demonstrating that it is esential (1) to pay scrupulous attention to the question of the frame dependence in formulating the equations; and (2) to solve the equations to 0(v/c) in quite general circumstances. These points are illustrated in the context of the nonequilibrium radiation diffusion limit, and a sketch of how the Lagrangian equations are to be solved will be presented

  20. Full sphere hydrodynamic and dynamo benchmarks

    KAUST Repository

    Marti, P.

    2014-01-26

    Convection in planetary cores can generate fluid flow and magnetic fields, and a number of sophisticated codes exist to simulate the dynamic behaviour of such systems. We report on the first community activity to compare numerical results of computer codes designed to calculate fluid flow within a whole sphere. The flows are incompressible and rapidly rotating and the forcing of the flow is either due to thermal convection or due to moving boundaries. All problems defined have solutions that alloweasy comparison, since they are either steady, slowly drifting or perfectly periodic. The first two benchmarks are defined based on uniform internal heating within the sphere under the Boussinesq approximation with boundary conditions that are uniform in temperature and stress-free for the flow. Benchmark 1 is purely hydrodynamic, and has a drifting solution. Benchmark 2 is a magnetohydrodynamic benchmark that can generate oscillatory, purely periodic, flows and magnetic fields. In contrast, Benchmark 3 is a hydrodynamic rotating bubble benchmark using no slip boundary conditions that has a stationary solution. Results from a variety of types of code are reported, including codes that are fully spectral (based on spherical harmonic expansions in angular coordinates and polynomial expansions in radius), mixed spectral and finite difference, finite volume, finite element and also a mixed Fourier-finite element code. There is good agreement between codes. It is found that in Benchmarks 1 and 2, the approximation of a whole sphere problem by a domain that is a spherical shell (a sphere possessing an inner core) does not represent an adequate approximation to the system, since the results differ from whole sphere results. © The Authors 2014. Published by Oxford University Press on behalf of The Royal Astronomical Society.

  1. Spectral maximum entropy hydrodynamics of fermionic radiation: a three-moment system for one-dimensional flows

    International Nuclear Information System (INIS)

    Banach, Zbigniew; Larecki, Wieslaw

    2013-01-01

    The spectral formulation of the nine-moment radiation hydrodynamics resulting from using the Boltzmann entropy maximization procedure is considered. The analysis is restricted to the one-dimensional flows of a gas of massless fermions. The objective of the paper is to demonstrate that, for such flows, the spectral nine-moment maximum entropy hydrodynamics of fermionic radiation is not a purely formal theory. We first determine the domains of admissible values of the spectral moments and of the Lagrange multipliers corresponding to them. We then prove the existence of a solution to the constrained entropy optimization problem. Due to the strict concavity of the entropy functional defined on the space of distribution functions, there exists a one-to-one correspondence between the Lagrange multipliers and the moments. The maximum entropy closure of moment equations results in the symmetric conservative system of first-order partial differential equations for the Lagrange multipliers. However, this system can be transformed into the equivalent system of conservation equations for the moments. These two systems are consistent with the additional conservation equation interpreted as the balance of entropy. Exploiting the above facts, we arrive at the differential relations satisfied by the entropy function and the additional function required to close the system of moment equations. We refer to this additional function as the moment closure function. In general, the moment closure and entropy–entropy flux functions cannot be explicitly calculated in terms of the moments determining the state of a gas. Therefore, we develop a perturbation method of calculating these functions. Some additional analytical (and also numerical) results are obtained, assuming that the maximum entropy distribution function tends to the Maxwell–Boltzmann limit. (paper)

  2. Radiation Coupling with the FUN3D Unstructured-Grid CFD Code

    Science.gov (United States)

    Wood, William A.

    2012-01-01

    The HARA radiation code is fully-coupled to the FUN3D unstructured-grid CFD code for the purpose of simulating high-energy hypersonic flows. The radiation energy source terms and surface heat transfer, under the tangent slab approximation, are included within the fluid dynamic ow solver. The Fire II flight test, at the Mach-31 1643-second trajectory point, is used as a demonstration case. Comparisons are made with an existing structured-grid capability, the LAURA/HARA coupling. The radiative surface heat transfer rates from the present approach match the benchmark values within 6%. Although radiation coupling is the focus of the present work, convective surface heat transfer rates are also reported, and are seen to vary depending upon the choice of mesh connectivity and FUN3D ux reconstruction algorithm. On a tetrahedral-element mesh the convective heating matches the benchmark at the stagnation point, but under-predicts by 15% on the Fire II shoulder. Conversely, on a mixed-element mesh the convective heating over-predicts at the stagnation point by 20%, but matches the benchmark away from the stagnation region.

  3. Creation and utilization of a World Wide Web based space radiation effects code: SIREST

    Science.gov (United States)

    Singleterry, R. C. Jr; Wilson, J. W.; Shinn, J. L.; Tripathi, R. K.; Thibeault, S. A.; Noor, A. K.; Cucinotta, F. A.; Badavi, F. F.; Chang, C. K.; Qualls, G. D.; hide

    2001-01-01

    In order for humans and electronics to fully and safely operate in the space environment, codes like HZETRN (High Charge and Energy Transport) must be included in any designer's toolbox for design evaluation with respect to radiation damage. Currently, spacecraft designers do not have easy access to accurate radiation codes like HZETRN to evaluate their design for radiation effects on humans and electronics. Today, the World Wide Web is sophisticated enough to support the entire HZETRN code and all of the associated pre and post processing tools. This package is called SIREST (Space Ionizing Radiation Effects and Shielding Tools). There are many advantages to SIREST. The most important advantage is the instant update capability of the web. Another major advantage is the modularity that the web imposes on the code. Right now, the major disadvantage of SIREST will be its modularity inside the designer's system. This mostly comes from the fact that a consistent interface between the designer and the computer system to evaluate the design is incomplete. This, however, is to be solved in the Intelligent Synthesis Environment (ISE) program currently being funded by NASA.

  4. Entropy-limited hydrodynamics: a novel approach to relativistic hydrodynamics

    Science.gov (United States)

    Guercilena, Federico; Radice, David; Rezzolla, Luciano

    2017-07-01

    We present entropy-limited hydrodynamics (ELH): a new approach for the computation of numerical fluxes arising in the discretization of hyperbolic equations in conservation form. ELH is based on the hybridisation of an unfiltered high-order scheme with the first-order Lax-Friedrichs method. The activation of the low-order part of the scheme is driven by a measure of the locally generated entropy inspired by the artificial-viscosity method proposed by Guermond et al. (J. Comput. Phys. 230(11):4248-4267, 2011, doi: 10.1016/j.jcp.2010.11.043). Here, we present ELH in the context of high-order finite-differencing methods and of the equations of general-relativistic hydrodynamics. We study the performance of ELH in a series of classical astrophysical tests in general relativity involving isolated, rotating and nonrotating neutron stars, and including a case of gravitational collapse to black hole. We present a detailed comparison of ELH with the fifth-order monotonicity preserving method MP5 (Suresh and Huynh in J. Comput. Phys. 136(1):83-99, 1997, doi: 10.1006/jcph.1997.5745), one of the most common high-order schemes currently employed in numerical-relativity simulations. We find that ELH achieves comparable and, in many of the cases studied here, better accuracy than more traditional methods at a fraction of the computational cost (up to {˜}50% speedup). Given its accuracy and its simplicity of implementation, ELH is a promising framework for the development of new special- and general-relativistic hydrodynamics codes well adapted for massively parallel supercomputers.

  5. Thermo-hydrodynamic lubrication in hydrodynamic bearings

    CERN Document Server

    Bonneau, Dominique; Souchet, Dominique

    2014-01-01

    This Series provides the necessary elements to the development and validation of numerical prediction models for hydrodynamic bearings. This book describes the thermo-hydrodynamic and the thermo-elasto-hydrodynamic lubrication. The algorithms are methodically detailed and each section is thoroughly illustrated.

  6. Hydrodynamics in full general relativity with conservative AMR

    OpenAIRE

    East, William E.; Pretorius, Frans; Stephens, Branson C.

    2011-01-01

    There is great interest in numerical relativity simulations involving matter due to the likelihood that binary compact objects involving neutron stars will be detected by gravitational wave observatories in the coming years, as well as to the possibility that binary compact object mergers could explain short-duration gamma-ray bursts. We present a code designed for simulations of hydrodynamics coupled to the Einstein field equations targeted toward such applications. This code has recently be...

  7. A Radiation Chemistry Code Based on the Green's Function of the Diffusion Equation

    Science.gov (United States)

    Plante, Ianik; Wu, Honglu

    2014-01-01

    Stochastic radiation track structure codes are of great interest for space radiation studies and hadron therapy in medicine. These codes are used for a many purposes, notably for microdosimetry and DNA damage studies. In the last two decades, they were also used with the Independent Reaction Times (IRT) method in the simulation of chemical reactions, to calculate the yield of various radiolytic species produced during the radiolysis of water and in chemical dosimeters. Recently, we have developed a Green's function based code to simulate reversible chemical reactions with an intermediate state, which yielded results in excellent agreement with those obtained by using the IRT method. This code was also used to simulate and the interaction of particles with membrane receptors. We are in the process of including this program for use with the Monte-Carlo track structure code Relativistic Ion Tracks (RITRACKS). This recent addition should greatly expand the capabilities of RITRACKS, notably to simulate DNA damage by both the direct and indirect effect.

  8. Automotive Underhood Thermal Management Analysis Using 3-D Coupled Thermal-Hydrodynamic Computer Models: Thermal Radiation Modeling

    Energy Technology Data Exchange (ETDEWEB)

    Pannala, S; D' Azevedo, E; Zacharia, T

    2002-02-26

    The goal of the radiation modeling effort was to develop and implement a radiation algorithm that is fast and accurate for the underhood environment. As part of this CRADA, a net-radiation model was chosen to simulate radiative heat transfer in an underhood of a car. The assumptions (diffuse-gray and uniform radiative properties in each element) reduce the problem tremendously and all the view factors for radiation thermal calculations can be calculated once and for all at the beginning of the simulation. The cost for online integration of heat exchanges due to radiation is found to be less than 15% of the baseline CHAD code and thus very manageable. The off-line view factor calculation is constructed to be very modular and has been completely integrated to read CHAD grid files and the output from this code can be read into the latest version of CHAD. Further integration has to be performed to accomplish the same with STAR-CD. The main outcome of this effort is to obtain a highly scalable and portable simulation capability to model view factors for underhood environment (for e.g. a view factor calculation which took 14 hours on a single processor only took 14 minutes on 64 processors). The code has also been validated using a simple test case where analytical solutions are available. This simulation capability gives underhood designers in the automotive companies the ability to account for thermal radiation - which usually is critical in the underhood environment and also turns out to be one of the most computationally expensive components of underhood simulations. This report starts off with the original work plan as elucidated in the proposal in section B. This is followed by Technical work plan to accomplish the goals of the project in section C. In section D, background to the current work is provided with references to the previous efforts this project leverages on. The results are discussed in section 1E. This report ends with conclusions and future scope of

  9. Intercomparison of three microwave/infrared high resolution line-by-line radiative transfer codes

    Science.gov (United States)

    Schreier, Franz; Milz, Mathias; Buehler, Stefan A.; von Clarmann, Thomas

    2018-05-01

    An intercomparison of three line-by-line (lbl) codes developed independently for atmospheric radiative transfer and remote sensing - ARTS, GARLIC, and KOPRA - has been performed for a thermal infrared nadir sounding application assuming a HIRS-like (High resolution Infrared Radiation Sounder) setup. Radiances for the 19 HIRS infrared channels and a set of 42 atmospheric profiles from the "Garand dataset" have been computed. The mutual differences of the equivalent brightness temperatures are presented and possible causes of disagreement are discussed. In particular, the impact of path integration schemes and atmospheric layer discretization is assessed. When the continuum absorption contribution is ignored because of the different implementations, residuals are generally in the sub-Kelvin range and smaller than 0.1 K for some window channels (and all atmospheric models and lbl codes). None of the three codes turned out to be perfect for all channels and atmospheres. Remaining discrepancies are attributed to different lbl optimization techniques. Lbl codes seem to have reached a maturity in the implementation of radiative transfer that the choice of the underlying physical models (line shape models, continua etc) becomes increasingly relevant.

  10. Simulation of radiation in laser produced plasmas

    Science.gov (United States)

    Colombant, D. G.; Klapisch, M.; Deniz, A. V.; Weaver, J.; Schmitt, A.

    1999-11-01

    The radiation hydrodynamics code FAST1D(J.H.Gardner,A.J.Schmitt,J.P.Dahlburg,C.J.Pawley,S.E.Bodner,S.P.Obenschain,V.Serlin and Y.Aglitskiy,Phys. Plasmas,5,1935(1998)) was used directly (i.e. without postprocessor) to simulate radiation emitted from flat targets irradiated by the Nike laser, from 10^12 W/cm^2 to 10^13W/cm^2. We use enough photon groups to resolve spectral lines. Opacities are obtained from the STA code(A.Bar-Shalom,J.Oreg,M.Klapisch and T.Lehecka,Phys.Rev.E,59,3512(1999)), and non LTE effects are described with the Busquet model(M.Busquet,Phys.Fluids B,5,4191(1993)). Results are compared to transmission grating spectra in the range 100-600eV, and to time-resolved calibrated filtered diodes (spectral windows around 100, 180, 280 and 450 eV).

  11. A Monte Carlo Code for Relativistic Radiation Transport Around Kerr Black Holes

    Science.gov (United States)

    Schnittman, Jeremy David; Krolik, Julian H.

    2013-01-01

    We present a new code for radiation transport around Kerr black holes, including arbitrary emission and absorption mechanisms, as well as electron scattering and polarization. The code is particularly useful for analyzing accretion flows made up of optically thick disks and optically thin coronae. We give a detailed description of the methods employed in the code and also present results from a number of numerical tests to assess its accuracy and convergence.

  12. Computer codes for tasks in the fields of isotope and radiation research

    International Nuclear Information System (INIS)

    Friedrich, K.; Gebhardt, O.

    1978-11-01

    Concise descriptions of computer codes developed for solving problems in the fields of isotope and radiation research at the Zentralinstitut fuer Isotopen- und Strahlenforschung (ZfI) are compiled. In part two the structure of the ZfI program library MABIF is outlined and a complete list of all codes available is given

  13. Simulation of seismic signals from asymmetric LANL hydrodynamic calculations

    International Nuclear Information System (INIS)

    Stevens, J.L.; Rimer, N.; Halda, E.J.; Barker, T.G.; Davis, C.G.; Johnson, W.E.

    1993-01-01

    Hydrodynamic calculations of an asymmetric nuclear explosion source were propagated to teleseismic distances to investigate the effects of the asymmetric source on seismic signals. The source is an explosion in a 12 meter long canister with the device at one end of the canister and a metal plate adjacent to the explosion. This produces a strongly asymmetric two-lobed source in the hydrodynamic region. The hydrodynamic source is propagated to the far field using a three-step process. The Eulerian hydrodynamic code SOIL was used by LANL to calculate the material velocity, density, and internal energy up to a time of 8.9 milliseconds after the explosion. These quantities were then transferred to an initial grid for the Lagrangian elastic/plastic finite difference code CRAM, which was used by S-CUBED to propagate the signal through the region of nonlinear deformation into the external elastic region. The cavity size and shape at the time of the overlay were determined by searching for a rapid density change in the SOIL grid, and this interior region was then rezoned into a single zone. The CRAM calculation includes material strength and gravity, and includes the effect of the free surface above the explosion. Finally, far field body waves were calculated by integrating over a closed surface in the elastic region and using the representation theorem. A second calculation was performed using an initially spherical source for comparison with the asymmetric calculation

  14. Application of OMEGA Monte Carlo codes for radiation therapy treatment planning

    International Nuclear Information System (INIS)

    Ayyangar, Komanduri M.; Jiang, Steve B.

    1998-01-01

    The accuracy of conventional dose algorithms for radiosurgery treatment planning is limited, due to the inadequate consideration of the lateral radiation transport and the difficulty of acquiring accurate dosimetric data for very small beams. In the present paper, some initial work on the application of Monte Carlo method in radiation treatment planning in general, and in radiosurgery treatment planning in particular, has been presented. Two OMEGA Monte Carlo codes, BEAM and DOSXYZ, are used. The BEAM code is used to simulate the transport of particles in the linac treatment head and radiosurgery collimator. A phase space file is obtained from the BEAM simulation for each collimator size. The DOSXYZ code is used to calculate the dose distribution in the patient's body reconstructed from CT slices using the phase space file as input. The accuracy of OMEGA Monte Carlo simulation for radiosurgery dose calculation is verified by comparing the calculated and measured basic dosimetric data for several radiosurgery beams and a 4 x 4 cm 2 conventional beam. The dose distributions for three clinical cases are calculated using OMEGA codes as the dose engine for an in-house developed radiosurgery treatment planning system. The verification using basic dosimetric data and the dose calculation for clinical cases demonstrate the feasibility of applying OMEGA Monte Carlo code system to radiosurgery treatment planning. (author)

  15. Clinical significance of AGE-RAGE axis in colorectal cancer: associations with glyoxalase-I, adiponectin receptor expression and prognosis

    International Nuclear Information System (INIS)

    Sakellariou, Stratigoula; Fragkou, Paraskevi; Levidou, Georgia; Gargalionis, Antonios N.; Piperi, Christina; Dalagiorgou, Georgia; Adamopoulos, Christos; Saetta, Angelica; Agrogiannis, George; Theohari, Irini; Sougioultzis, Stavros; Tsioli, Panagiota; Karavokyros, Ioannis; Tsavaris, Nikolaos; Kostakis, Ioannis D.; Zizi-Serbetzoglou, Adamantia; Vandoros, Gerasimos P.; Patsouris, Efstratios; Korkolopoulou, Penelope

    2016-01-01

    Advanced glycation end products (AGEs) and their receptor RAGE emerge as important pathogenic contributors in colorectal carcinogenesis. However, their relationship to the detoxification enzyme Glyoxalase (GLO)-I and Adiponectin receptors (AdipoR1, AdipoR2) in colorectal carcinoma (CRC) is currently understudied. In the present study, we investigated the expression levels of the above molecules in CRC compared to adjacent non-tumoral tissue and their potential correlation with clinicopathological characteristics and patients’ survival. We analyzed the immunohistochemical expression of AGE, RAGE, GLO-1, AdipoR1 and AdipoR2 in 133 primary CRC cases, focusing on GLO-I. The tumour MSI status was further assessed in mucinous carcinomas. Western immunoblotting was employed for validation of immunohistochemical data in normal and tumoral tissues as well in three CRC cell lines. An independent set of 55 patients was also used to validate the results of univariate survival analysis regarding GLO-I. CRC tissue showed higher intensity of both AGE and RAGE expression compared with normal colonic mucosa which was negative for GLO-I in most cases (78 %). Western immunoblotting confirmed AGE, RAGE and GLO-I overexpression in tumoral tissue. GLO-I expression was directly related to RAGE and inversely related to AGE immunolabeling. There was a trend towards higher expression of all markers (except for RAGE) in the subgroup of mucinous carcinomas which, although of borderline significance, seemed to be more prominent for AdipoR1 and AGE. Additionally, AGE, AdipoR1 and Adipo R2 expression was related to tumor grade, whereas GLO-1 and AdipoR1 to T-category. In survival analysis, AdipoR2 and GLO-I overexpression predicted shortened survival in the entire cohort and in early stage cases, an effect which for GLO-I was reproduced in the validation cohort. Moreover, GLO-I emerged as an independent prognosticator of adverse significance in the patients’ cohort. We herein provide novel

  16. Evaluation of the computer code system RADHEAT-V4 by analysing benchmark problems on radiation shielding

    International Nuclear Information System (INIS)

    Sakamoto, Yukio; Naito, Yoshitaka

    1990-11-01

    A computer code system RADHEAT-V4 has been developed for safety evaluation on radiation shielding of nuclear fuel facilities. To evaluate the performance of the code system, 18 benchmark problem were selected and analysed. Evaluated radiations are neutron and gamma-ray. Benchmark problems consist of penetration, streaming and skyshine. The computed results show more accurate than those by the Sn codes ANISN and DOT3.5 or the Monte Carlo code MORSE. Big core memory and many times I/O are, however, required for RADHEAT-V4. (author)

  17. A NUMERICAL TREATMENT OF ANISOTROPIC RADIATION FIELDS COUPLED WITH RELATIVISTIC RESISTIVE MAGNETOFLUIDS

    Energy Technology Data Exchange (ETDEWEB)

    Takahashi, Hiroyuki R. [Center for Computational Astrophysics, National Astronomical Observatory of Japan, Mitaka, Tokyo 181-8588 (Japan); Ohsuga, Ken [Division of Theoretical Astronomy, National Astronomical Observatory of Japan, Mitaka, Tokyo 181-8588 (Japan)

    2013-08-01

    We develop a numerical scheme for solving fully special relativistic, resistive radiation magnetohydrodynamics. Our code guarantees conservation of total mass, momentum, and energy. The radiation energy density and the radiation flux are consistently updated using the M-1 closure method, which can resolve an anisotropic radiation field, in contrast to the Eddington approximation, as well as the flux-limited diffusion approximation. For the resistive part, we adopt a simple form of Ohm's law. The advection terms are explicitly solved with an approximate Riemann solver, mainly the Harten-Lax-van Leer scheme; the HLLC and HLLD schemes are also solved for some tests. The source terms, which describe the gas-radiation interaction and the magnetic energy dissipation, are implicitly integrated, relaxing the Courant-Friedrichs-Lewy condition even in an optically thick regime or a large magnetic Reynolds number regime. Although we need to invert 4 Multiplication-Sign 4 matrices (for the gas-radiation interaction) and 3 Multiplication-Sign 3 matrices (for the magnetic energy dissipation) at each grid point for implicit integration, they are obtained analytically without preventing massive parallel computing. We show that our code gives reasonable outcomes in numerical tests for ideal magnetohydrodynamics, propagating radiation, and radiation hydrodynamics. We also applied our resistive code to the relativistic Petschek-type magnetic reconnection, revealing the reduction of the reconnection rate via radiation drag.

  18. A NUMERICAL TREATMENT OF ANISOTROPIC RADIATION FIELDS COUPLED WITH RELATIVISTIC RESISTIVE MAGNETOFLUIDS

    International Nuclear Information System (INIS)

    Takahashi, Hiroyuki R.; Ohsuga, Ken

    2013-01-01

    We develop a numerical scheme for solving fully special relativistic, resistive radiation magnetohydrodynamics. Our code guarantees conservation of total mass, momentum, and energy. The radiation energy density and the radiation flux are consistently updated using the M-1 closure method, which can resolve an anisotropic radiation field, in contrast to the Eddington approximation, as well as the flux-limited diffusion approximation. For the resistive part, we adopt a simple form of Ohm's law. The advection terms are explicitly solved with an approximate Riemann solver, mainly the Harten-Lax-van Leer scheme; the HLLC and HLLD schemes are also solved for some tests. The source terms, which describe the gas-radiation interaction and the magnetic energy dissipation, are implicitly integrated, relaxing the Courant-Friedrichs-Lewy condition even in an optically thick regime or a large magnetic Reynolds number regime. Although we need to invert 4 × 4 matrices (for the gas-radiation interaction) and 3 × 3 matrices (for the magnetic energy dissipation) at each grid point for implicit integration, they are obtained analytically without preventing massive parallel computing. We show that our code gives reasonable outcomes in numerical tests for ideal magnetohydrodynamics, propagating radiation, and radiation hydrodynamics. We also applied our resistive code to the relativistic Petschek-type magnetic reconnection, revealing the reduction of the reconnection rate via radiation drag

  19. Quasilinear simulation of auroral kilometric radiation by a relativistic Fokker-Planck code

    International Nuclear Information System (INIS)

    Matsuda, Y.

    1991-01-01

    An intense terrestrial radiation called the auroral kilometric radiation (AKR) is believed to be generated by cyclotron maser instability. We study a quasilinear evolution of this instability by means of a two-dimensional relativistic Fokker-Planck code which treats waves and distributions self-consistently, including radiation loss and electron source and sink. We compare the distributions and wave amplitude with spacecraft observations to elucidate physical processes involved. 3 refs., 1 fig

  20. Relativistic (3+1) dimensional hydrodynamic simulations of compact interacting binary systems

    International Nuclear Information System (INIS)

    Mathews, G.J.; Evans, C.R.; Wilson, J.R.

    1986-09-01

    We discuss the development of a relativistic hydrodynamic code for describing the evolution of astrophysical systems in three spatial dimensions. The application of this code to several test problems is presented. Preliminary results from the simulation of the dynamics of accreting binary white dwarf and neutron star systems are discussed. 14 refs., 4 figs

  1. Sleep Now in The Fire: An Analysis of A Song by Rage Against The Machine Using Marxism

    Directory of Open Access Journals (Sweden)

    Abdul Azis Turhan Kariko

    2011-10-01

    Full Text Available Rage against the Machine is known for their politics as well as their music, which the later helped creating an aggressive-heavy rock-rap genre. Article presents a song by Rage against the Machine band related to ideological movement in America, titled Sleep Now in the Fire. This effort brings an understanding of ideology that is embraced by the band. The method is through literature study. Presentation begins with a short biography of the band, theoretical concepts, and analysis of the song as well its music video. It is concluded that the song represents ideological criticism toward capitalism using Marxism. Both of these lyric and music video represents Marxism as it shares the same movement to fight capitalism—which in this case, Rage against the Machine is using their music, lyric, and video to fight the crime against humanity and cultural imperialism. 

  2. DATA-DRIVEN RADIATIVE HYDRODYNAMIC MODELING OF THE 2014 MARCH 29 X1.0 SOLAR FLARE

    Energy Technology Data Exchange (ETDEWEB)

    Costa, Fatima Rubio da; Petrosian, Vahé [Department of Physics, Stanford University, Stanford, CA 94305 (United States); Kleint, Lucia [University of Applied Sciences and Arts Northwestern Switzerland, 5210 Windisch (Switzerland); Liu, Wei [Bay Area Environmental Research Institute, 625 2nd Street, Suite 209, Petaluma, CA 94952-5159 (United States); Allred, Joel C., E-mail: frubio@stanford.edu [NASA/Goddard Space Flight Center, Code 671, Greenbelt, MD 20771 (United States)

    2016-08-10

    Spectroscopic observations of solar flares provide critical diagnostics of the physical conditions in the flaring atmosphere. Some key features in observed spectra have not yet been accounted for in existing flare models. Here we report a data-driven simulation of the well-observed X1.0 flare on 2014 March 29 that can reconcile some well-known spectral discrepancies. We analyzed spectra of the flaring region from the Interface Region Imaging Spectrograph ( IRIS ) in Mg ii h and k, the Interferometric BIdimensional Spectropolarimeter at the Dunn Solar Telescope (DST/IBIS) in H α 6563 Å and Ca ii 8542 Å, and the Reuven Ramaty High Energy Solar Spectroscope Imager ( RHESSI ) in hard X-rays. We constructed a multithreaded flare loop model and used the electron flux inferred from RHESSI data as the input to the radiative hydrodynamic code RADYN to simulate the atmospheric response. We then synthesized various chromospheric emission lines and compared them with the IRIS and IBIS observations. In general, the synthetic intensities agree with the observed ones, especially near the northern footpoint of the flare. The simulated Mg ii line profile has narrower wings than the observed one. This discrepancy can be reduced by using a higher microturbulent velocity (27 km s{sup −1}) in a narrow chromospheric layer. In addition, we found that an increase of electron density in the upper chromosphere within a narrow height range of ≈800 km below the transition region can turn the simulated Mg ii line core into emission and thus reproduce the single peaked profile, which is a common feature in all IRIS flares.

  3. HMGB1 induces an inflammatory response in endothelial cells via the RAGE-dependent endoplasmic reticulum stress pathway

    International Nuclear Information System (INIS)

    Luo, Ying; Li, Shu-Jun; Yang, Jian; Qiu, Yuan-Zhen; Chen, Fang-Ping

    2013-01-01

    Highlights: •Mechanisms of inflammatory response induced by HMGB1 are incompletely understood. •We found that endoplasmic reticulum stress mediate the inflammatory response induced by HMGB1. •RAGE-mediated ERS pathways are involved in those processes. •We reported a new mechanism for HMGB1 induced inflammatory response. -- Abstract: The high mobility group 1B protein (HMGB1) mediates chronic inflammatory responses in endothelial cells, which play a critical role in atherosclerosis. However, the underlying mechanism is unknown. The goal of our study was to identify the effects of HMGB1 on the RAGE-induced inflammatory response in endothelial cells and test the possible involvement of the endoplasmic reticulum stress pathway. Our results showed that incubation of endothelial cells with HMGB1 (0.01–1 μg/ml) for 24 h induced a dose-dependent activation of endoplasmic reticulum stress transducers, as assessed by PERK and IRE1 protein expression. Moreover, HMGB1 also promoted nuclear translocation of ATF6. HMGB1-mediated ICAM-1 and P-selectin production was dramatically suppressed by PERK siRNA or IRE1 siRNA. However, non-targeting siRNA had no such effects. HMGB1-induced increases in ICAM-1 and P-selectin expression were also inhibited by a specific eIF2α inhibitor (salubrinal) and a specific JNK inhibitor (SP600125). Importantly, a blocking antibody specifically targeted against RAGE (anti-RAGE antibody) decreased ICAM-1, P-selectin and endoplasmic reticulum stress molecule (PERK, eIF2α, IRE1 and JNK) protein expression levels. Collectively, these novel findings suggest that HMGB1 promotes an inflammatory response by inducing the expression of ICAM-1 and P-selectin via RAGE-mediated stimulation of the endoplasmic reticulum stress pathway

  4. Role of IL-1 beta and 5-HT2 receptors in midbrain periaqueductal gray (PAG) in potentiating defensive rage behavior in cat.

    Science.gov (United States)

    Bhatt, Suresh; Bhatt, Rekha; Zalcman, Steven S; Siegel, Allan

    2008-02-01

    Feline defensive rage, a form of aggressive behavior that occurs in response to a threat can be elicited by electrical stimulation of the medial hypothalamus or midbrain periaqueductal gray (PAG). Our laboratory has recently begun a systematic examination of the role of cytokines in the regulation of rage and aggressive behavior. It was shown that the cytokine, interleukin-2 (IL-2), differentially modulates defensive rage when microinjected into the medial hypothalamus and PAG by acting through separate neurotransmitter systems. The present study sought to determine whether a similar relationship exists with respect to interleukin 1-beta (IL-1 beta), whose receptor activation in the medial hypothalamus potentiates defensive rage. Thus, the present study identified the effects of administration of IL-1 beta into the PAG upon defensive rage elicited from the medial hypothalamus. Microinjections of IL-1 beta into the dorsal PAG significantly facilitated defensive rage behavior elicited from the medial hypothalamus in a dose and time dependent manner. In addition, the facilitative effects of IL-1 beta were blocked by pre-treatment with anti-IL-1 beta receptor antibody, while IL-1 beta administration into the PAG had no effect upon predatory attack elicited from the lateral hypothalamus. The findings further demonstrated that IL-1 beta's effects were mediated through 5-HT(2) receptors since pretreatment with a 5-HT(2C) receptors antagonist blocked the facilitating effects of IL-1 beta. An extensive pattern of labeling of IL-1 beta and 5-HT(2C) receptors in the dorsal PAG supported these findings. The present study demonstrates that IL-beta in the dorsal PAG, similar to the medial hypothalamus, potentiates defensive rage behavior and is mediated through a 5-HT(2C) receptor mechanism.

  5. Modelling massive-star feedback with Monte Carlo radiation hydrodynamics: photoionization and radiation pressure in a turbulent cloud

    Science.gov (United States)

    Ali, Ahmad; Harries, Tim J.; Douglas, Thomas A.

    2018-04-01

    We simulate a self-gravitating, turbulent cloud of 1000M⊙ with photoionization and radiation pressure feedback from a 34M⊙ star. We use a detailed Monte Carlo radiative transfer scheme alongside the hydrodynamics to compute photoionization and thermal equilibrium with dust grains and multiple atomic species. Using these gas temperatures, dust temperatures, and ionization fractions, we produce self-consistent synthetic observations of line and continuum emission. We find that all material is dispersed from the (15.5pc)3 grid within 1.6Myr or 0.74 free-fall times. Mass exits with a peak flux of 2× 10-3M⊙yr-1, showing efficient gas dispersal. The model without radiation pressure has a slight delay in the breakthrough of ionization, but overall its effects are negligible. 85 per cent of the volume, and 40 per cent of the mass, become ionized - dense filaments resist ionization and are swept up into spherical cores with pillars that point radially away from the ionizing star. We use free-free emission at 20cm to estimate the production rate of ionizing photons. This is almost always underestimated: by a factor of a few at early stages, then by orders of magnitude as mass leaves the volume. We also test the ratio of dust continuum surface brightnesses at 450 and 850μ to probe dust temperatures. This underestimates the actual temperature by more than a factor of 2 in areas of low column density or high line-of-sight temperature dispersion; the HII region cavity is particularly prone to this discrepancy. However, the probe is accurate in dense locations such as filaments.

  6. Heating, Hydrodynamics, and Radiation From a Laser Heated Non-LTE High-Z Target

    Science.gov (United States)

    Gray, William; Foord, M. E.; Schneider, M. B.; Barrios, M. A.; Brown, G. V.; Heeter, R. F.; Jarrott, L. C.; Liedahl, D. A.; Marley, E. V.; Mauche, C. W.; Widmann, K.

    2016-10-01

    We present 2D R-z simulations that model the hydrodynamics and x-ray output of a laser heated, tamped foil, using the rad-hydro code LASNEX. The foil consists of a thin (2400 A) cylindrical disk of iron/vanadium/gold that is embedded in a thicker Be tamper. The simulations utilize a non-LTE detailed configuration (DCA) model, which generates the emission spectra. Simulated pinhole images are compared with data, finding qualitative agreement with the time-history of the face-on emission profiles, and exhibiting an interesting reduction in emission size over a few ns time period. Furthermore, we find that the simulations recover similar burn through times in both the target and Be tamper as measured by a time-dependent filtered x-ray detector (DANTE). Additional results and characterization of the experimental plasma will be presented. This work performed under the auspices of U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.

  7. Effects of RAGE-Specific Inhibitor FPS-ZM1 on Amyloid-β Metabolism and AGEs-Induced Inflammation and Oxidative Stress in Rat Hippocampus.

    Science.gov (United States)

    Hong, Yan; Shen, Chao; Yin, Qingqing; Sun, Menghan; Ma, Yingjuan; Liu, Xueping

    2016-05-01

    An increased level of advanced glycation end products (AGEs) is observed in brains of patients with Alzheimer's disease (AD). AGEs and receptor for AGEs (RAGE) play important roles in the pathogenesis of AD. FPS-ZM1 is a high-affinity RAGE-specific blocker that inhibits amyloid-β binding to RAGE, neurological damage and inflammation in the APP(sw/0) transgenic mouse model of AD. FPS-ZM1 is not toxic to mice and can easily cross the blood-brain barrier. In this study, an AGEs-RAGE-activated rat model were established by intrahippocampal injection of AGEs, then these rats were treated with intraperitoneal administration of FPS-ZM1 and the possible neuroprotective effects were investigated. We found that AGEs administration induced an-regulation of Abeta production, inflammation, and oxidative stress, and an increased escape latency of rats in the Morris water maze test, all of these are significantly reduced by FPS-ZM1 treatment. Our results suggest that the AGEs-RAGE pathway is responsible for cognitive deficits, and therefore may be a potential treatment target. FPS-ZM1 might be a novel therapeutic agent to treat AD patients.

  8. ANALYTICAL SOLUTIONS FOR RADIATIVE TRANSFER: IMPLICATIONS FOR GIANT PLANET FORMATION BY DISK INSTABILITY

    International Nuclear Information System (INIS)

    Boss, Alan P.

    2009-01-01

    The disk instability mechanism for giant planet formation is based on the formation of clumps in a marginally gravitationally unstable protoplanetary disk, which must lose thermal energy through a combination of convection and radiative cooling if they are to survive and contract to become giant protoplanets. While there is good observational support for forming at least some giant planets by disk instability, the mechanism has become theoretically contentious, with different three-dimensional radiative hydrodynamics codes often yielding different results. Rigorous code testing is required to make further progress. Here we present two new analytical solutions for radiative transfer in spherical coordinates, suitable for testing the code employed in all of the Boss disk instability calculations. The testing shows that the Boss code radiative transfer routines do an excellent job of relaxing to and maintaining the analytical results for the radial temperature and radiative flux profiles for a spherical cloud with high or moderate optical depths, including the transition from optically thick to optically thin regions. These radial test results are independent of whether the Eddington approximation, diffusion approximation, or flux-limited diffusion approximation routines are employed. The Boss code does an equally excellent job of relaxing to and maintaining the analytical results for the vertical (θ) temperature and radiative flux profiles for a disk with a height proportional to the radial distance. These tests strongly support the disk instability mechanism for forming giant planets.

  9. Influence of non-LTE radiation ablation on imploding neutron yield

    International Nuclear Information System (INIS)

    Sheng Jiatian; Li Yunsheng; Gao Yaomin; Li Meng; Feng Tinggui; Zhang Lifa; Zeng Xiancai; Mou Wenyong; Feng Jie; Chen Jiabin

    2005-01-01

    The process of radiative ablation and neutron yields of DD-capsule with CH shell implosion driven by Plank spectrum and nonequilibrium spectrum radiation fields was numerically studied using 1-D RDMG code of multigroup-nonequilibrium radiation hydrodynamics. The simulation results were compared with the experimental results. The results of the simulation show that the nonequilibrium of energy spectrum distribution of the hohlraum radiation source, especially the M-band of it, will preheat DD in the capsule obviously, decrease the compressing ratio, electron and ion temperatures of DD gas, and therefore decrease the neutron yields markedly. The simulation results also show that the law of decreasing of neutron yields with increasing of the CH-sell thickness is in agreement with the experiment basically. (authors)

  10. Collection of regulatory texts relative to radiation protection. Part 2: orders and decisions taken in application of the Public Health Code and Labour Code concerning the protection of populations, patients and workers against the risks of ionizing radiations

    International Nuclear Information System (INIS)

    2007-05-01

    This collection of texts includes the general measures of population protection, exposure to natural radiations, general system of authorizations and statements, protection of persons exposed to ionizing radiations for medical purpose, situations of radiological emergency and long exposure to ionizing radiations, penal dispositions, application of the Public Health code and application of the Labour code. Chronological contents by date of publication is given. (N.C.)

  11. Development of a computer code for Dalat research reactor transient analysis

    International Nuclear Information System (INIS)

    Le Vinh Vinh; Nguyen Thai Sinh; Huynh Ton Nghiem; Luong Ba Vien; Pham Van Lam; Nguyen Kien Cuong

    2003-01-01

    DRSIM (Dalat Reactor SIMulation) computer code has been developed for Dalat reactor transient analysis. It is basically a coupled neutronics-hydrodynamics-heat transfer code employing point kinetics, one dimensional hydrodynamics and one dimensional heat transfer. The work was financed by VAEC and DNRI in the framework of institutional R and D programme. Some transient problems related to reactivity and loss of coolant flow was carried out by DRSIM using temperature and void coefficients calculated by WIMS and HEXNOD2D codes. (author)

  12. Accelerating execution of the integrated TIGER series Monte Carlo radiation transport codes

    Science.gov (United States)

    Smith, L. M.; Hochstedler, R. D.

    1997-02-01

    Execution of the integrated TIGER series (ITS) of coupled electron/photon Monte Carlo radiation transport codes has been accelerated by modifying the FORTRAN source code for more efficient computation. Each member code of ITS was benchmarked and profiled with a specific test case that directed the acceleration effort toward the most computationally intensive subroutines. Techniques for accelerating these subroutines included replacing linear search algorithms with binary versions, replacing the pseudo-random number generator, reducing program memory allocation, and proofing the input files for geometrical redundancies. All techniques produced identical or statistically similar results to the original code. Final benchmark timing of the accelerated code resulted in speed-up factors of 2.00 for TIGER (the one-dimensional slab geometry code), 1.74 for CYLTRAN (the two-dimensional cylindrical geometry code), and 1.90 for ACCEPT (the arbitrary three-dimensional geometry code).

  13. Accelerating execution of the integrated TIGER series Monte Carlo radiation transport codes

    International Nuclear Information System (INIS)

    Smith, L.M.; Hochstedler, R.D.

    1997-01-01

    Execution of the integrated TIGER series (ITS) of coupled electron/photon Monte Carlo radiation transport codes has been accelerated by modifying the FORTRAN source code for more efficient computation. Each member code of ITS was benchmarked and profiled with a specific test case that directed the acceleration effort toward the most computationally intensive subroutines. Techniques for accelerating these subroutines included replacing linear search algorithms with binary versions, replacing the pseudo-random number generator, reducing program memory allocation, and proofing the input files for geometrical redundancies. All techniques produced identical or statistically similar results to the original code. Final benchmark timing of the accelerated code resulted in speed-up factors of 2.00 for TIGER (the one-dimensional slab geometry code), 1.74 for CYLTRAN (the two-dimensional cylindrical geometry code), and 1.90 for ACCEPT (the arbitrary three-dimensional geometry code)

  14. MODA: a new algorithm to compute optical depths in multidimensional hydrodynamic simulations

    Science.gov (United States)

    Perego, Albino; Gafton, Emanuel; Cabezón, Rubén; Rosswog, Stephan; Liebendörfer, Matthias

    2014-08-01

    Aims: We introduce the multidimensional optical depth algorithm (MODA) for the calculation of optical depths in approximate multidimensional radiative transport schemes, equally applicable to neutrinos and photons. Motivated by (but not limited to) neutrino transport in three-dimensional simulations of core-collapse supernovae and neutron star mergers, our method makes no assumptions about the geometry of the matter distribution, apart from expecting optically transparent boundaries. Methods: Based on local information about opacities, the algorithm figures out an escape route that tends to minimize the optical depth without assuming any predefined paths for radiation. Its adaptivity makes it suitable for a variety of astrophysical settings with complicated geometry (e.g., core-collapse supernovae, compact binary mergers, tidal disruptions, star formation, etc.). We implement the MODA algorithm into both a Eulerian hydrodynamics code with a fixed, uniform grid and into an SPH code where we use a tree structure that is otherwise used for searching neighbors and calculating gravity. Results: In a series of numerical experiments, we compare the MODA results with analytically known solutions. We also use snapshots from actual 3D simulations and compare the results of MODA with those obtained with other methods, such as the global and local ray-by-ray method. It turns out that MODA achieves excellent accuracy at a moderate computational cost. In appendix we also discuss implementation details and parallelization strategies.

  15. Radiation protection for human exploration of the moon and mars: Application of the mash code system

    International Nuclear Information System (INIS)

    Johnson, J.O.; Santoro, R.T.; Drischler, J.D.; Barnes, J.M.

    1992-01-01

    The Monte Carlo Adjoint Shielding code system -- MASH, developed for the Department of Defense for calculating radiation protection factors for armored vehicles against neutron and gamma radiation, has been used to assess the dose from reactor radiation to an occupant in a habitat on Mars. The capability of MASH to reproduce measured data is summarized to demonstrate the accuracy of the code. The estimation of the radiation environment in an idealized reactor-habitat model is reported to illustrate the merits of the adjoint Monte Carlo procedure for space related studies. The reactor radiation dose for different reactor-habitat surface configurations to a habitat occupant is compared with the natural radiation dose acquired during a 500-day Mars mission

  16. Numerical analysis of the effects of radiation heat transfer and ionization energy loss on the cavitation Bubble's dynamics

    International Nuclear Information System (INIS)

    Mahdi, M.; Ebrahimi, R.; Shams, M.

    2011-01-01

    A numerical scheme for simulating the acoustic and hydrodynamic cavitation was developed. Bubble instantaneous radius was obtained using Gilmore equation which considered the compressibility of the liquid. A uniform temperature was assumed for the inside gas during the collapse. Radiation heat transfer inside the bubble and the heat conduction to the bubble was considered. The numerical code was validated with the experimental data and a good correspondence was observed. The dynamics of hydrofoil cavitation bubble were also investigated. It was concluded that the thermal radiation heat transfer rate strongly depended on the cavitation number, initial bubble radius and hydrofoil angle of attack. -- Highlights: → Heat transfer and ionization energy losses were analyzed in the cavitation bubble. → Radiation of hydrodynamic bubble was approximately equal to the black body. → Radiation heat transfer did not affect the bubble dynamic. → Conduction decreased the bubble pressure and increased the bubble temperature. → Ionization decreased the temperature and increased the pressure in the bubble.

  17. THE BIGGEST EXPLOSIONS IN THE UNIVERSE

    International Nuclear Information System (INIS)

    Johnson, Jarrett L.; Whalen, Daniel J.; Smidt, Joseph; Even, Wesley; Fryer, Chris L.; Heger, Alex; Chen, Ke-Jung

    2013-01-01

    Supermassive primordial stars are expected to form in a small fraction of massive protogalaxies in the early universe, and are generally conceived of as the progenitors of the seeds of supermassive black holes (BHs). Supermassive stars with masses of ∼55, 000 M ☉ , however, have been found to explode and completely disrupt in a supernova (SN) with an energy of up to ∼10 55 erg instead of collapsing to a BH. Such events, ∼10, 000 times more energetic than typical SNe today, would be among the biggest explosions in the history of the universe. Here we present a simulation of such a SN in two stages. Using the RAGE radiation hydrodynamics code, we first evolve the explosion from an early stage through the breakout of the shock from the surface of the star until the blast wave has propagated out to several parsecs from the explosion site, which lies deep within an atomic cooling dark matter (DM) halo at z ≅ 15. Then, using the GADGET cosmological hydrodynamics code, we evolve the explosion out to several kiloparsecs from the explosion site, far into the low-density intergalactic medium. The host DM halo, with a total mass of 4 × 10 7 M ☉ , much more massive than typical primordial star-forming halos, is completely evacuated of high-density gas after ∼ ☉ after ∼> 70 Myr. The chemical signature of supermassive star explosions may be found in such long-lived second-generation stars today

  18. MONTE CARLO RADIATION TRANSFER SIMULATIONS OF PHOTOSPHERIC EMISSION IN LONG-DURATION GAMMA-RAY BURSTS

    Energy Technology Data Exchange (ETDEWEB)

    Lazzati, Davide [Department of Physics, Oregon State University, 301 Weniger Hall, Corvallis, OR 97331 (United States)

    2016-10-01

    We present MCRaT, a Monte Carlo Radiation Transfer code for self-consistently computing the light curves and spectra of the photospheric emission from relativistic, unmagnetized jets. We apply MCRaT to a relativistic hydrodynamic simulation of a long-duration gamma-ray burst jet, and present the resulting light curves and time-dependent spectra for observers at various angles from the jet axis. We compare our results to observational results and find that photospheric emission is a viable model to explain the prompt phase of long-duration gamma-ray bursts at the peak frequency and above, but faces challenges when reproducing the flat spectrum below the peak frequency. We finally discuss possible limitations of these results both in terms of the hydrodynamics and the radiation transfer and how these limitations could affect the conclusions that we present.

  19. Code of practice for radiation protection in dentistry (1987)

    International Nuclear Information System (INIS)

    1988-01-01

    This code is intended as a guide to safe practices and lays down detailed requirements for the following protective measures : allocation of responsibility and need for clinical assessment of the indications for radiography; provision of appropriate equipment, film and processing facilities; adoption of procedures to minimise exposure to radiation. This code deals with radiographic procedures commonly used in general and specialist dental practice. These entail : intra-oral radiography: periapical, bitewing and occlusal views; panoramic radiography: intra-oral tube radiography and panoramic tomography; radiography of the complete skull or certain parts of the dento-maxillo-facial region; hand and wrist radiography for the sole purpose of the determination of the bone age

  20. RAGE Reusable Game Software Components and Their Integration into Serious Game Engines

    NARCIS (Netherlands)

    Van der Vegt, Wim; Nyamsuren, Enkhbold; Westera, Wim

    2016-01-01

    This paper presents and validates a methodology for integrating reusable software components in diverse game engines. While conforming to the RAGE com-ponent-based architecture described elsewhere, the paper explains how the interac-tions and data exchange processes between a reusable software

  1. The radiation protection code of practice in teletherapy facilities

    International Nuclear Information System (INIS)

    Fadlalla, N. S. M.

    2010-05-01

    This study aimed to provide a document (code) for the standard practice in teletherapy facilities to be a reference and guide for establishing new teletherapy facilities or mending an existing one, another aim was to evaluated the teletherapy facilities with regard to their compliance to the recommendations and guides mentioned in this document. This document includes: safety specifications for teletherapy equipment, facility planning and shielding design, radiation protection and work practice, quality assurance and personnel requirements and responsibilities. In order to assess the degree of compliance of the two centers in the country with what was stated in the developed document IAEA inspection checklist was utilized and made some radiation measurement were made around the treatment rooms. The results of such inspection mission revealed that the current status of radiation protection in both of inspected centers is almost similar and both are not satisfactory as many of the essential items of radiation protection as stipulated in this document were not followed, which lead to unnecessary, radiation exposure to patients and staff. Finally, some recommendations that may help to improve the status of radiation protection in radiotherapy departments in Sudan are given. (Author)

  2. User's manual for the Heat Pipe Space Radiator design and analysis Code (HEPSPARC)

    Science.gov (United States)

    Hainley, Donald C.

    1991-01-01

    A heat pipe space radiatior code (HEPSPARC), was written for the NASA Lewis Research Center and is used for the design and analysis of a radiator that is constructed from a pumped fluid loop that transfers heat to the evaporative section of heat pipes. This manual is designed to familiarize the user with this new code and to serve as a reference for its use. This manual documents the completed work and is intended to be the first step towards verification of the HEPSPARC code. Details are furnished to provide a description of all the requirements and variables used in the design and analysis of a combined pumped loop/heat pipe radiator system. A description of the subroutines used in the program is furnished for those interested in understanding its detailed workings.

  3. Development of a space radiation Monte Carlo computer simulation based on the FLUKA and ROOT codes

    CERN Document Server

    Pinsky, L; Ferrari, A; Sala, P; Carminati, F; Brun, R

    2001-01-01

    This NASA funded project is proceeding to develop a Monte Carlo-based computer simulation of the radiation environment in space. With actual funding only initially in place at the end of May 2000, the study is still in the early stage of development. The general tasks have been identified and personnel have been selected. The code to be assembled will be based upon two major existing software packages. The radiation transport simulation will be accomplished by updating the FLUKA Monte Carlo program, and the user interface will employ the ROOT software being developed at CERN. The end-product will be a Monte Carlo-based code which will complement the existing analytic codes such as BRYNTRN/HZETRN presently used by NASA to evaluate the effects of radiation shielding in space. The planned code will possess the ability to evaluate the radiation environment for spacecraft and habitats in Earth orbit, in interplanetary space, on the lunar surface, or on a planetary surface such as Mars. Furthermore, it will be usef...

  4. Code of Practice for the Protection of Persons against Ionizing Radiations arising from Medical and Dental Use

    Energy Technology Data Exchange (ETDEWEB)

    1972-01-01

    This Code is a revision of the 1964 Code of Practice for the protection of persons against ionizing radiations arising from medical and dental use. This revised Code (which does not have the force of law) applies to the use of ionizing radiations arising from all forms of medical and dental practice and from allied research involving human subjects. It covers both workers, patients and members of the public. Although the arrangements recommended relate primarily to institutions they should be applied, as far as possible, by all medical and dental practitioners. The Code has been drawn up in the light of the recommendations of the International Commission on Radiological Protection (ICRP) and of the views of the Medical Research Council's Committee on Protection against Ionizing Radiations.

  5. Code of Practice on Radiation Protection in the Mining and Processing of Mineral Sands (1982) (Western Australia)

    International Nuclear Information System (INIS)

    1982-01-01

    This Code establishes radiation safety practices for the mineral sands industry in Western Australia. The Code prescribes, not only for operators and managers of mines and processing plants but for their employees as well, certain duties designed to ensure that radiation exposure is kept as low as reasonably practicable. The Code further provides for the management of wastes, again with a view to keeping contaminant concentrations and dose rates within specified levels. Finally, provision is made for the rehabilitation of those sites in which mining or processing operations have ceased by restoring the areas to designated average radiation levels. (NEA) [fr

  6. The association of low muscle mass with soluble receptor for advanced glycation end products (sRAGE): The Korean Sarcopenic Obesity Study (KSOS).

    Science.gov (United States)

    Kim, Tae Nyun; Park, Man Sik; Lee, Eun Joo; Chung, Hye Soo; Yoo, Hye Jin; Kang, Hyun Joo; Song, Wook; Baik, Sei Hyun; Choi, Kyung Mook

    2018-03-01

    Advanced glycation end products (AGEs) are accumulated with aging in various tissues of humans. The soluble receptor for AGEs (sRAGE) exerts a protective role against the development of aging-related chronic disorders by neutralizing the action of AGEs. We investigated the implication of sRAGE on low muscle mass in Asian men and women. This cross-sectional study included a 390-participant, nondiabetic subcohort recruited within the framework of the Korean Sarcopenic Obesity Study, an ongoing prospective cohort study. Low muscle mass was defined based on the distribution of appendicular skeletal muscle mass divided by body mass index, as proposed by the Foundation for the National Institutes Sarcopenia Project. Serum sRAGE levels were significantly lower in participants with low muscle mass than in participants without low muscle mass (0.76 [0.60-1.00] ng/mL vs 0.87 [0.67-1.15] ng/mL, P = .005). In age- and sex-adjusted correlation analyses, appendicular skeletal muscle mass divided by body mass index was associated with sRAGE (r = 0.109, P = .037). Furthermore, decreased circulating levels of sRAGE are independently associated with low muscle mass (odds ratio = 0.254, P = .002) after adjusting for confounding factors, including insulin resistance and inflammatory markers. The present study shows that a low circulating level of sRAGE may be an independent risk factor for the presence of low muscle mass. Copyright © 2017 John Wiley & Sons, Ltd.

  7. Association between the RAGE (receptor for advanced glycation end-products -374T/A gene polymorphism and diabetic retinopathy in T2DM

    Directory of Open Access Journals (Sweden)

    Dan Tao

    Full Text Available Summary Objective: Interaction between advanced glycation end-products (AGEs and receptor for AGEs (RAGE in cells could affect both extracellular and intracellular structure and function, which plays a pivotal role in diabetic microvascular complications. The results from previous epidemiological studies on the association between RAGE gene -374T/A polymorphism and diabetic retinopathy (DR risk were inconsistent. Thus, we conducted this meta-analysis to summarize the possible association between RAGE -374T/A polymorphism and DR risk. Method: We searched all relevant articles on the association between RAGE -374T/A polymorphism and DR risk from PubMed, Cochrane Library, ScienceDirect, Wanfang, VIP and Chinese National Knowledge Infrastructure (CNKI web databases up to August 2016. Odds ratio (OR with 95% confidence interval (CI were calculated to assess those associations. All analyses were performed using the Review Manager software. Results: Nine case-control studies, including 1,705 DR cases and 2,236 controls were enrolled, and the results showed that the A allele of RAGE -374T/A polymorphism was significantly associated with increased DR risk in dominant model (TA/AA vs. TT: OR=1.22, 95CI 1.05-1.41, p=0.006 and heterozygote model (TA vs. TT: OR=1.26, 95CI 1.07-1.47, p=0.005. The subgroup analysis by ethnicity showed that significantly increased DR risk was found in both Asian and Caucasian populations. Conclusion: This meta-analysis reveals that the A allele of RAGE -374T/A polymorphism probably increase DR risk.

  8. Hydrodynamic calculations of 20-TeV beam interactions with the SSC beam dump

    International Nuclear Information System (INIS)

    Wilson, D.C.; Wingate, C.A.; Goldstein, J.C.; Godwin, R.P.; Mokhov, N.V.

    1993-01-01

    The 300μs, 400 MJ SSC proton beam must be contained when extracted to the external beam dump. The current design for the SSC beam dump can tolerate the beat load produced if the beam is deflected into a raster scan over the face of the dump. If the high frequency deflecting magnet were to fail, the beam would scan a single strip across the dump face resulting in higher local energy deposition. This could vaporize some material and lead to high pressures. Since the beam duration is comparable to the characteristic time of expected hydrodynamic motions, we have combined the static energy deposition capability of the MARS computer code with the two- and three-dimensional hydrodynamics of the MBA and SPHINX codes. EOS data suggest an energy deposition threshold of 15 kJ/g, below which hydrodynamic effects are minimal. Above this our 2D calculations show a hole boring rate of 7 cm/μs for the nominal beam, and pressures of a few kbar. Scanning the nominal beam faster than 0.08 cm/μs should minimize hydrodynamic effects. 3D calculations support this

  9. Los Alamos and Lawrence Livermore National Laboratories Code-to-Code Comparison of Inter Lab Test Problem 1 for Asteroid Impact Hazard Mitigation

    Energy Technology Data Exchange (ETDEWEB)

    Weaver, Robert P. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Miller, Paul [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Howley, Kirsten [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Ferguson, Jim Michael [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Gisler, Galen Ross [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Plesko, Catherine Suzanne [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Managan, Rob [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Owen, Mike [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Wasem, Joseph [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Bruck-Syal, Megan [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2016-01-15

    The NNSA Laboratories have entered into an interagency collaboration with the National Aeronautics and Space Administration (NASA) to explore strategies for prevention of Earth impacts by asteroids. Assessment of such strategies relies upon use of sophisticated multi-physics simulation codes. This document describes the task of verifying and cross-validating, between Lawrence Livermore National Laboratory (LLNL) and Los Alamos National Laboratory (LANL), modeling capabilities and methods to be employed as part of the NNSA-NASA collaboration. The approach has been to develop a set of test problems and then to compare and contrast results obtained by use of a suite of codes, including MCNP, RAGE, Mercury, Ares, and Spheral. This document provides a short description of the codes, an overview of the idealized test problems, and discussion of the results for deflection by kinetic impactors and stand-off nuclear explosions.

  10. Radiation Shielding Information Center: a source of computer codes and data for fusion neutronics studies

    International Nuclear Information System (INIS)

    McGill, B.L.; Roussin, R.W.; Trubey, D.K.; Maskewitz, B.F.

    1980-01-01

    The Radiation Shielding Information Center (RSIC), established in 1962 to collect, package, analyze, and disseminate information, computer codes, and data in the area of radiation transport related to fission, is now being utilized to support fusion neutronics technology. The major activities include: (1) answering technical inquiries on radiation transport problems, (2) collecting, packaging, testing, and disseminating computing technology and data libraries, and (3) reviewing literature and operating a computer-based information retrieval system containing material pertinent to radiation transport analysis. The computer codes emphasize methods for solving the Boltzmann equation such as the discrete ordinates and Monte Carlo techniques, both of which are widely used in fusion neutronics. The data packages include multigroup coupled neutron-gamma-ray cross sections and kerma coefficients, other nuclear data, and radiation transport benchmark problem results

  11. Premar-2: a Monte Carlo code for radiative transport simulation in atmospheric environments

    International Nuclear Information System (INIS)

    Cupini, E.

    1999-01-01

    The peculiarities of the PREMAR-2 code, aimed at radiation transport Monte Carlo simulation in atmospheric environments in the infrared-ultraviolet frequency range, are described. With respect to the previously developed PREMAR code, besides plane multilayers, spherical multilayers and finite sequences of vertical layers, each one with its own atmospheric behaviour, are foreseen in the new code, together with the refraction phenomenon, so that long range, highly slanted paths can now be more faithfully taken into account. A zenithal angular dependence of the albedo coefficient has moreover been introduced. Lidar systems, with spatially independent source and telescope, are allowed again to be simulated, and, in this latest version of the code, sensitivity analyses to be performed. According to this last feasibility, consequences on radiation transport of small perturbations in physical components of the atmospheric environment may be analyze and the related effects on searched results estimated. The availability of a library of physical data (reaction coefficients, phase functions and refraction indexes) is required by the code, providing the essential features of the environment of interest needed of the Monte Carlo simulation. Variance reducing techniques have been enhanced in the Premar-2 code, by introducing, for instance, a local forced collision technique, especially apt to be used in Lidar system simulations. Encouraging comparisons between code and experimental results carried out at the Brasimone Centre of ENEA, have so far been obtained, even if further checks of the code are to be performed [it

  12. A New Two-fluid Radiation-hydrodynamical Model for X-Ray Pulsar Accretion Columns

    Energy Technology Data Exchange (ETDEWEB)

    West, Brent F. [Department of Electrical and Computer Engineering, United States Naval Academy, Annapolis, MD (United States); Wolfram, Kenneth D. [Naval Research Laboratory (retired), Washington, DC (United States); Becker, Peter A., E-mail: bwest@usna.edu, E-mail: kswolfram@gmail.com, E-mail: pbecker@gmu.edu [Department of Physics and Astronomy, George Mason University, Fairfax, VA USA (United States)

    2017-02-01

    Previous research centered on the hydrodynamics in X-ray pulsar accretion columns has largely focused on the single-fluid model, in which the super-Eddington luminosity inside the column decelerates the flow to rest at the stellar surface. This type of model has been relatively successful in describing the overall properties of the accretion flows, but it does not account for the possible dynamical effect of the gas pressure. On the other hand, the most successful radiative transport models for pulsars generally do not include a rigorous treatment of the dynamical structure of the column, instead assuming an ad hoc velocity profile. In this paper, we explore the structure of X-ray pulsar accretion columns using a new, self-consistent, “two-fluid” model, which incorporates the dynamical effect of the gas and radiation pressures, the dipole variation of the magnetic field, the thermodynamic effect of all of the relevant coupling and cooling processes, and a rigorous set of physical boundary conditions. The model has six free parameters, which we vary in order to approximately fit the phase-averaged spectra in Her X-1, Cen X-3, and LMC X-4. In this paper, we focus on the dynamical results, which shed new light on the surface magnetic field strength, the inclination of the magnetic field axis relative to the rotation axis, the relative importance of gas and radiation pressures, and the radial variation of the ion, electron, and inverse-Compton temperatures. The results obtained for the X-ray spectra are presented in a separate paper.

  13. Collection of regulatory texts related to radiation protection (collection of legal and regulatory measures related to radiation protection). Part 1: laws and decrees (Extracts of the Public Health Code and of the Labour Code dealing with the protection of population, patients and workers against the hazards of ionizing radiations); Part 2: orders, decisions, non codified decrees (Orders and decisions taken in application of the Public Health Code and of the Labour Code dealing with the protection of population, patients and workers against the hazards of ionizing radiations)

    International Nuclear Information System (INIS)

    Rivas, R.; Saad, N.; Niel, X.; Cottin, V.; Lachaume, J.L.; Feries, J.

    2011-01-01

    The first part contains legal and regulatory texts extracted from the Public Health Code and related to health general protection and to health products (medical devices), from the Social Security Code, and from the Labour Code related to individual work relationships, to health and safety at work, to work places, to work equipment and means of protection, to the prevention of some exposure risks and of risks related to some activities. The second part gathers texts extracted from the Public Health Code and related to ionizing radiations (general measures for the protection of the population, exposure to natural radiations, general regime of authorizations and declarations, purchase, retailing, importation, exportation, transfer and elimination of radioactive sources, protection of persons exposed to ionizing radiations for medical or forensics purposes, situations of radiological emergency and of sustained exposure to ionizing radiations, control), to the safety of waters and food products, and to the control of medical devices, to the protection of patients. It also contains extracts for the Labour Code related to workers protection

  14. SCRIC: a code dedicated to the detailed emission and absorption of heterogeneous NLTE plasmas; application to xenon EUV sources

    International Nuclear Information System (INIS)

    Gaufridy de Dortan, F. de

    2006-01-01

    Nearly all spectral opacity codes for LTE and NLTE plasmas rely on configurations approximate modelling or even supra-configurations modelling for mid Z plasmas. But in some cases, configurations interaction (either relativistic and non relativistic) induces dramatic changes in spectral shapes. We propose here a new detailed emissivity code with configuration mixing to allow for a realistic description of complex mid Z plasmas. A collisional radiative calculation. based on HULLAC precise energies and cross sections. determines the populations. Detailed emissivities and opacities are then calculated and radiative transfer equation is resolved for wide inhomogeneous plasmas. This code is able to cope rapidly with very large amount of atomic data. It is therefore possible to use complex hydrodynamic files even on personal computers in a very limited time. We used this code for comparison with Xenon EUV sources within the framework of nano-lithography developments. It appears that configurations mixing strongly shifts satellite lines and must be included in the description of these sources to enhance their efficiency. (author)

  15. Modeling UV Radiation Feedback from Massive Stars. I. Implementation of Adaptive Ray-tracing Method and Tests

    Science.gov (United States)

    Kim, Jeong-Gyu; Kim, Woong-Tae; Ostriker, Eve C.; Skinner, M. Aaron

    2017-12-01

    We present an implementation of an adaptive ray-tracing (ART) module in the Athena hydrodynamics code that accurately and efficiently handles the radiative transfer involving multiple point sources on a three-dimensional Cartesian grid. We adopt a recently proposed parallel algorithm that uses nonblocking, asynchronous MPI communications to accelerate transport of rays across the computational domain. We validate our implementation through several standard test problems, including the propagation of radiation in vacuum and the expansions of various types of H II regions. Additionally, scaling tests show that the cost of a full ray trace per source remains comparable to that of the hydrodynamics update on up to ∼ {10}3 processors. To demonstrate application of our ART implementation, we perform a simulation of star cluster formation in a marginally bound, turbulent cloud, finding that its star formation efficiency is 12% when both radiation pressure forces and photoionization by UV radiation are treated. We directly compare the radiation forces computed from the ART scheme with those from the M 1 closure relation. Although the ART and M 1 schemes yield similar results on large scales, the latter is unable to resolve the radiation field accurately near individual point sources.

  16. Computer codes in nuclear safety, radiation transport and dosimetry

    International Nuclear Information System (INIS)

    Bordy, J.M.; Kodeli, I.; Menard, St.; Bouchet, J.L.; Renard, F.; Martin, E.; Blazy, L.; Voros, S.; Bochud, F.; Laedermann, J.P.; Beaugelin, K.; Makovicka, L.; Quiot, A.; Vermeersch, F.; Roche, H.; Perrin, M.C.; Laye, F.; Bardies, M.; Struelens, L.; Vanhavere, F.; Gschwind, R.; Fernandez, F.; Quesne, B.; Fritsch, P.; Lamart, St.; Crovisier, Ph.; Leservot, A.; Antoni, R.; Huet, Ch.; Thiam, Ch.; Donadille, L.; Monfort, M.; Diop, Ch.; Ricard, M.

    2006-01-01

    The purpose of this conference was to describe the present state of computer codes dedicated to radiation transport or radiation source assessment or dosimetry. The presentations have been parted into 2 sessions: 1) methodology and 2) uses in industrial or medical or research domains. It appears that 2 different calculation strategies are prevailing, both are based on preliminary Monte-Carlo calculations with data storage. First, quick simulations made from a database of particle histories built though a previous Monte-Carlo simulation and secondly, a neuronal approach involving a learning platform generated through a previous Monte-Carlo simulation. This document gathers the slides of the presentations

  17. Quantitative PCR and immunohistochemical analyses of HMGB1 and RAGE expression in canine disseminated histiocytic sarcoma (malignant histiocytosis).

    Science.gov (United States)

    Sterenczak, Katharina A; Kleinschmidt, Sven; Wefstaedt, Patrick; Eberle, Nina; Hewicker-Trautwein, Marion; Bullerdiek, Jörn; Nolte, Ingo; Murua Escobar, Hugo

    2011-05-01

    Disorders of histiocytic origin affecting humans and dogs share various similarities. Canine disseminated histiocytic sarcoma (DHS) (formerly known as malignant histiocytosis) is an aggressive neoplasm of interstitial dendritic cells (DCs). The receptor for glycation end products (RAGE) and the high mobility group box1 protein (HMGB1) have been shown to be required for the maturation and migration of DCs. Thus, deregulation of the expression of these genes could have a major effect on the progression of histiocytic disorders. Neoplastic canine DHS samples and non-neoplastic control samples were analysed immunohistochemically and via real-time PCR. Significant down-regulation of RAGE in the lung tumour samples and down-regulation of HMGB1 in the lung, lymph node and spleen tumour samples were detected compared to their non-neoplastic counterparts. RAGE and HMGB1 expression down-regulation in canine DHS points to a role in the progression of histiocytic disorders.

  18. Serum Levels of sRAGE Are Associated with Body Measurements, but Not Glycemic Parameters in Patients with Prediabetes.

    Science.gov (United States)

    Guclu, Metin; Ali, Asuman; Eroglu, Derya Ustun; Büyükuysal, Sema Oral; Cander, Soner; Ocak, Nihal

    2016-02-01

    Our aim was to assess serum levels of the soluble receptor for advanced glycation end products (sRAGE) and to examine their association with anthropometric and metabolic parameters in patients with prediabetes and obese controls. The two study groups were composed of 42 patients with prediabetes and diabetic neuropathy and 42 age-, gender-, body weight (BW)-, and body mass index (BMI)-matched obese adults as the control group. Prediabetes was diagnosed by the following criteria issued by the American Diabetes Association: impaired fasting glucose [fasting plasma glucose (FPG) level of 100-125 mg/dL], impaired glucose tolerance (2 hr plasma glucose level of 140-199 mg/dL after a 75 grams oral glucose challenge), or a glycated hemoglobin (HbA1C) level of 5.7%-6.4%. There were no differences between the groups in terms of age, gender distribution, BW, or BMI. Despite these similarities, patients with prediabetes had higher FPG, HbA1c, and 2-hr postchallenge glucose levels, higher systolic and diastolic blood pressure, and larger waist and hip circumferences compared with the obese controls. Lipid measurements, complete blood counts, kidney and liver function tests, high-sensitivity C-reactive protein, and sRAGE levels were similar between the two groups. We found significant negative correlations between sRAGE levels and BW, BMI, waist and hip circumferences, waist-to-hip ratios, and low-density lipoprotein (LDL) cholesterol levels. There were no significant correlations with other parameters, including demographic, metabolic, and blood pressure measurements. In contrast to glycemic parameters, serum levels of sRAGE were negatively correlated with body measurements indicative of obesity in the prediabetic state. In addition, the negative correlation with LDL cholesterol levels suggests that sRAGE has a more robust association with metabolic syndrome than with prediabetes.

  19. A hydrodynamic treatment of the tilted cold dark matter cosmological scenario

    Science.gov (United States)

    Cen, Renyue; Ostriker, Jeremiah P.

    1993-01-01

    A standard hydrodynamic code coupled with a particle-mesh code is used to compute the evolution of a tilted cold dark matter (TCDM) model containing both baryonic matter and dark matter. Six baryonic species are followed, with allowance for both collisional and radiative ionization in every cell. The mean final Zel'dovich-Sunyaev y parameter is estimated to be (5.4 +/- 2.7) x 10 exp -7, below currently attainable observations, with an rms fluctuation of about (6.0 +/- 3.0) x 10 exp -7 on arcmin scales. The rate of galaxy formation peaks at a relatively late epoch (z is about 0.5). In the case of mass function, the smallest objects are stabilized against collapse by thermal energy: the mass-weighted mass spectrum peaks in the vicinity of 10 exp 9.1 solar masses, with a reasonable fit to the Schechter luminosity function if the baryon mass to blue light ratio is about 4. It is shown that a bias factor of 2 required for the model to be consistent with COBE DMR signals is probably a natural outcome in the present multiple component simulations.

  20. User's manual for DYNA2D: an explicit two-dimensional hydrodynamic finite-element code with interactive rezoning

    Energy Technology Data Exchange (ETDEWEB)

    Hallquist, J.O.

    1982-02-01

    This revised report provides an updated user's manual for DYNA2D, an explicit two-dimensional axisymmetric and plane strain finite element code for analyzing the large deformation dynamic and hydrodynamic response of inelastic solids. A contact-impact algorithm permits gaps and sliding along material interfaces. By a specialization of this algorithm, such interfaces can be rigidly tied to admit variable zoning without the need of transition regions. Spatial discretization is achieved by the use of 4-node solid elements, and the equations-of motion are integrated by the central difference method. An interactive rezoner eliminates the need to terminate the calculation when the mesh becomes too distorted. Rather, the mesh can be rezoned and the calculation continued. The command structure for the rezoner is described and illustrated by an example.

  1. Code of Practice for the Protection of Persons against Ionizing Radiations arising from Medical and Dental Use

    International Nuclear Information System (INIS)

    1972-01-01

    This Code is a revision of the 1964 Code of Practice for the protection of persons against ionizing radiations arising from medical and dental use. This revised Code (which does not have the force of law) applies to the use of ionizing radiations arising from all forms of medical and dental practice and from allied research involving human subjects. It covers both workers, patients and members of the public. Although the arrangements recommended relate primarily to institutions they should be applied, as far as possible, by all medical and dental practitioners. The Code has been drawn up in the light of the recommendations of the International Commission on Radiological Protection (ICRP) and of the views of the Medical Research Council's Committee on Protection against Ionizing Radiations. (NEA) [fr

  2. Numerical analysis of the effects of radiation heat transfer and ionization energy loss on the cavitation Bubble's dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Mahdi, M. [Faculty of Mechanical Engineering, K.N. Toosi University of Technology, Tehran (Iran, Islamic Republic of); Ebrahimi, R. [Faculty of Aerospace Engineering, K.N. Toosi University of Technology, Tehran (Iran, Islamic Republic of); Shams, M., E-mail: shams@kntu.ac.ir [Faculty of Mechanical Engineering, K.N. Toosi University of Technology, Pardis St., Molla-Sadra Ave, Vanak. Sq., P.O. Box: 19395-1999, Tehran (Iran, Islamic Republic of)

    2011-06-13

    A numerical scheme for simulating the acoustic and hydrodynamic cavitation was developed. Bubble instantaneous radius was obtained using Gilmore equation which considered the compressibility of the liquid. A uniform temperature was assumed for the inside gas during the collapse. Radiation heat transfer inside the bubble and the heat conduction to the bubble was considered. The numerical code was validated with the experimental data and a good correspondence was observed. The dynamics of hydrofoil cavitation bubble were also investigated. It was concluded that the thermal radiation heat transfer rate strongly depended on the cavitation number, initial bubble radius and hydrofoil angle of attack. -- Highlights: → Heat transfer and ionization energy losses were analyzed in the cavitation bubble. → Radiation of hydrodynamic bubble was approximately equal to the black body. → Radiation heat transfer did not affect the bubble dynamic. → Conduction decreased the bubble pressure and increased the bubble temperature. → Ionization decreased the temperature and increased the pressure in the bubble.

  3. WEC3: Wave Energy Converter Code Comparison Project: Preprint

    Energy Technology Data Exchange (ETDEWEB)

    Combourieu, Adrien; Lawson, Michael; Babarit, Aurelien; Ruehl, Kelley; Roy, Andre; Costello, Ronan; Laporte Weywada, Pauline; Bailey, Helen

    2017-01-01

    This paper describes the recently launched Wave Energy Converter Code Comparison (WEC3) project and present preliminary results from this effort. The objectives of WEC3 are to verify and validate numerical modelling tools that have been developed specifically to simulate wave energy conversion devices and to inform the upcoming IEA OES Annex VI Ocean Energy Modelling Verification and Validation project. WEC3 is divided into two phases. Phase 1 consists of a code-to-code verification and Phase II entails code-to-experiment validation. WEC3 focuses on mid-fidelity codes that simulate WECs using time-domain multibody dynamics methods to model device motions and hydrodynamic coefficients to model hydrodynamic forces. Consequently, high-fidelity numerical modelling tools, such as Navier-Stokes computational fluid dynamics simulation, and simple frequency domain modelling tools were not included in the WEC3 project.

  4. Relationship of Soluble RAGE with Insulin Resistance and Beta Cell Function during Development of Type 2 Diabetes Mellitus

    Directory of Open Access Journals (Sweden)

    Subrata Kumar Biswas

    2015-01-01

    Full Text Available This study examined whether circulating levels of soluble receptor for advanced glycation end products (sRAGE alter in prediabetes and correlate with insulin resistance (IR and beta cell function in prediabetes and newly diagnosed type 2 diabetes mellitus (T2DM. Subjects without previous history of diabetes were recruited and grouped as control, prediabetes, and newly diagnosed T2DM. The control subjects (n=40 and people with prediabetes (n=52 and diabetes (n=66 were similar in terms of age, sex, BMI, systolic and diastolic BP, and fasting insulin level. HOMA-IR was found significantly higher in people with diabetes than control subjects (p<0.001 and people with prediabetes (p=0.005; and HOMA-%B was found significantly deteriorated in people with diabetes (p<0.001 compared to control subjects and people with prediabetes. However, serum sRAGE levels did not show any significant alteration in people with prediabetes compared to control subjects. Moreover, univariate and multivariate analyses did not identify any significant correlation and statistical association of sRAGE with HOMA-IR and HOMA-%B in people with prediabetes and newly diagnosed T2DM. Our data suggest that serum sRAGE levels do not alter in people with prediabetes compared to control subjects and do not correlate or associate with IR and beta cell function during development of T2DM.

  5. Non-LTE modeling of the radiative properties of high-Z plasma using linear response methodology

    Science.gov (United States)

    Foord, Mark; Harte, Judy; Scott, Howard

    2017-10-01

    Non-local thermodynamic equilibrium (NLTE) atomic processes play a key role in the radiation flow and energetics in highly ionized high temperature plasma encountered in inertial confinement fusion (ICF) and astrophysical applications. Modeling complex high-Z atomic systems, such as gold used in ICF hohlraums, is particularly challenging given the complexity and intractable number of atomic states involved. Practical considerations, i.e. speed and memory, in large radiation-hydrodynamic simulations further limit model complexity. We present here a methodology for utilizing tabulated NLTE radiative and EOS properties for use in our radiation-hydrodynamic codes. This approach uses tabulated data, previously calculated with complex atomic models, modified to include a general non-Planckian radiation field using a linear response methodology. This approach extends near-LTE response method to conditions far from LTE. Comparisons of this tabular method with in-line NLTE simulations of a laser heated 1-D hohlraum will be presented, which show good agreement in the time-evolution of the plasma conditions. This work was performed under the auspices of the U.S. Dept. of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.

  6. RAPTOR. I. Time-dependent radiative transfer in arbitrary spacetimes

    Science.gov (United States)

    Bronzwaer, T.; Davelaar, J.; Younsi, Z.; Mościbrodzka, M.; Falcke, H.; Kramer, M.; Rezzolla, L.

    2018-05-01

    Context. Observational efforts to image the immediate environment of a black hole at the scale of the event horizon benefit from the development of efficient imaging codes that are capable of producing synthetic data, which may be compared with observational data. Aims: We aim to present RAPTOR, a new public code that produces accurate images, animations, and spectra of relativistic plasmas in strong gravity by numerically integrating the equations of motion of light rays and performing time-dependent radiative transfer calculations along the rays. The code is compatible with any analytical or numerical spacetime. It is hardware-agnostic and may be compiled and run both on GPUs and CPUs. Methods: We describe the algorithms used in RAPTOR and test the code's performance. We have performed a detailed comparison of RAPTOR output with that of other radiative-transfer codes and demonstrate convergence of the results. We then applied RAPTOR to study accretion models of supermassive black holes, performing time-dependent radiative transfer through general relativistic magneto-hydrodynamical (GRMHD) simulations and investigating the expected observational differences between the so-called fast-light and slow-light paradigms. Results: Using RAPTOR to produce synthetic images and light curves of a GRMHD model of an accreting black hole, we find that the relative difference between fast-light and slow-light light curves is less than 5%. Using two distinct radiative-transfer codes to process the same data, we find integrated flux densities with a relative difference less than 0.01%. Conclusions: For two-dimensional GRMHD models, such as those examined in this paper, the fast-light approximation suffices as long as errors of a few percent are acceptable. The convergence of the results of two different codes demonstrates that they are, at a minimum, consistent. The public version of RAPTOR is available at the following URL: http://https://github.com/tbronzwaer/raptor

  7. CHASM Challenge Problem: Lagrangian Hydrodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Hornung, R [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Keasler, J [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Gokhale, M [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2010-09-10

    Computer simulations of many science and engineering problems require modeling the equations of hydrodynamics which describe the motion of materials relative to each other induced by various forces. Many important DoD simulation problems involve complex multi-material systems that undergo large deformations. Examples include the analysis of armor defense, penetration mechanics, blast effects, structural integrity, and conventional munitions such as shaped charges and explosively formed projectiles. Indeed, the original motivation for developing codes that solve the equations of hydrodynamics, herein referred to as “hydrocodes”, was to solve problems with defense applications. The FY2010 Requirements Analysis Report issued by the DoD High Performance Computing Modernization Program (HPCMP) Office shows that a major portion of DoD HPC activities involves hydrocodes [HPCMP2010]. The report surveyed 496 projects across the Services and various Agencies, representing 4,050 HPCMP users at more than 125 locations, including government, contractors, and academia, and grouped each project into one of ten categories.

  8. Hydrodynamic simulation of X-UV laser-produced plasmas

    International Nuclear Information System (INIS)

    Fajardo, M.; Zeitoun, P.; Gauthier, J.C.

    2004-01-01

    With the construction of novel X-UV sources, such as V-UV FEL's (free-electron lasers), X-UV laser-matter interaction will become available at ultra-high intensities. But even table-top facilities such as X-UV lasers or High Harmonic Generation, are starting to reach intensities high enough to produce dense plasmas. X-UV laser-matter interaction is studied by a 1-dimensional hydrodynamic Lagrangian code with radiative transfer for a range of interesting X-UV sources. Heating is found to be very different for Z=12-14 elements having L-edges around the X-UV laser wavelength. Possible absorption mechanisms were investigated in order to explain this behaviour, and interaction with cold dense matter proved to be dominant. Plasma sensitivity to X-UV laser parameters such as energy, pulse duration, and wavelength was also studied, covering ranges of existing X-UV lasers. We found that X-UV laser-produced plasmas could be studied using table-top lasers, paving the way for future V-UV-FEL high intensity experiments. (authors)

  9. Introduction to hydrodynamics

    International Nuclear Information System (INIS)

    Wilkins, M.L.

    1979-01-01

    Various aspects of hydrodynamics and elastic--plastic flow are introduced for the purpose of defining hydrodynamic terms and explaining what some of the important hydrodynamic concepts are. The first part covers hydrodynamic theory; and discussed fundamental hydrodynamic equations, discontinuities, and shock, detonation, and elastic--plastic waves. The second part deals with applications of hydrodynamic theory to material equations of state, spall, Taylor instabilities, and detonation pressure measurements

  10. Modeling Warm Dense Matter Experiments using the 3D ALE-AMR Code and the Move Toward Exascale Computing

    International Nuclear Information System (INIS)

    Koniges, A.; Eder, E.; Liu, W.; Barnard, J.; Friedman, A.; Logan, G.; Fisher, A.; Masers, N.; Bertozzi, A.

    2011-01-01

    The Neutralized Drift Compression Experiment II (NDCX II) is an induction accelerator planned for initial commissioning in 2012. The final design calls for a 3 MeV, Li+ ion beam, delivered in a bunch with characteristic pulse duration of 1 ns, and transverse dimension of order 1 mm. The NDCX II will be used in studies of material in the warm dense matter (WDM) regime, and ion beam/hydrodynamic coupling experiments relevant to heavy ion based inertial fusion energy. We discuss recent efforts to adapt the 3D ALE-AMR code to model WDM experiments on NDCX II. The code, which combines Arbitrary Lagrangian Eulerian (ALE) hydrodynamics with Adaptive Mesh Refinement (AMR), has physics models that include ion deposition, radiation hydrodynamics, thermal diffusion, anisotropic material strength with material time history, and advanced models for fragmentation. Experiments at NDCX-II will explore the process of bubble and droplet formation (two-phase expansion) of superheated metal solids using ion beams. Experiments at higher temperatures will explore equation of state and heavy ion fusion beam-to-target energy coupling efficiency. Ion beams allow precise control of local beam energy deposition providing uniform volumetric heating on a timescale shorter than that of hydrodynamic expansion. The ALE-AMR code does not have any export control restrictions and is currently running at the National Energy Research Scientific Computing Center (NERSC) at LBNL and has been shown to scale well to thousands of CPUs. New surface tension models that are being implemented and applied to WDM experiments. Some of the approaches use a diffuse interface surface tension model that is based on the advective Cahn-Hilliard equations, which allows for droplet breakup in divergent velocity fields without the need for imposed perturbations. Other methods require seeding or other methods for droplet breakup. We also briefly discuss the effects of the move to exascale computing and related

  11. Hydrodynamic evolution of plasma waveguides for soft-x-ray amplifiers

    Science.gov (United States)

    Oliva, Eduardo; Depresseux, Adrien; Cotelo, Manuel; Lifschitz, Agustín; Tissandier, Fabien; Gautier, Julien; Maynard, Gilles; Velarde, Pedro; Sebban, Stéphane

    2018-02-01

    High-density, collisionally pumped plasma-based soft-x-ray lasers have recently delivered hundreds of femtosecond pulses, breaking the longstanding barrier of one picosecond. To pump these amplifiers an intense infrared pulse must propagate focused throughout all the length of the amplifier, which spans several Rayleigh lengths. However, strong nonlinear effects hinder the propagation of the laser beam. The use of a plasma waveguide allows us to overcome these drawbacks provided the hydrodynamic processes that dominate the creation and posterior evolution of the waveguide are controlled and optimized. In this paper we present experimental measurements of the radial density profile and transmittance of such waveguide, and we compare them with numerical calculations using hydrodynamic and particle-in-cell codes. Controlling the properties (electron density value and radial gradient) of the waveguide with the help of numerical codes promises the delivery of ultrashort (tens of femtoseconds), coherent soft-x-ray pulses.

  12. Rage in a Time of Millennial Raving: Rage Against the Machine’s Critical Disruption of Y2K Excitement Rage Against the Machine, ou la critique raisonnée de la frénésie millénariste

    Directory of Open Access Journals (Sweden)

    Phillip Serrato

    2009-11-01

    Full Text Available Nous étudierons l’intrusion brillante et salutaire du groupe Rage Against the Machine, avec son album The Battle of Los Angeles (1999, dans la frénésie euphorique du passage au deuxième millénaire à la fin de l’année 1999. Les genres musicaux les plus populaires de l’époque – dance music et pop « bubble gum » – reflètent un intérêt décroissant pour le politique, notamment sur les questions ethniques et le problème de l’immigration. Face à la popularité d’artistes latinos comme Jennifer Lopez et Marc Anthony semblant annoncer une ère d’où aurait disparu toute discrimination raciale, le disque de Rage Against the Machine détonne singulièrement, de par son insistance à défendre des positions politiques tranchées. Au vu de la place prépondérante des questions d’immigration au début de l’an 2000, l’album de ce groupe engagé peut être envisagé comme un avertissement aux allures prophétiques contre la tentation de l’étourdissement dans une euphorie millénariste.

  13. Hydrodynamics of phase transition fronts and the speed of sound in the plasma

    International Nuclear Information System (INIS)

    Leitao, Leonardo; Mégevand, Ariel

    2015-01-01

    The growth of bubbles in cosmological first-order phase transitions involves nontrivial hydrodynamics. For that reason, the study of the propagation of phase transition fronts often requires several approximations. A frequently used approximation consists in describing the two phases as being composed only of radiation and vacuum energy (the so-called bag equation of state). We show that, in realistic models, the speed of sound in the low-temperature phase is generally smaller than that of radiation, and we study the hydrodynamics in such a situation. We find in particular that a new kind of hydrodynamical solution may be possible, which does not arise in the bag model. We obtain analytic results for the efficiency of the transfer of latent heat to bulk motions of the plasma, as a function of the speed of sound in each phase

  14. Hydrodynamics of phase transition fronts and the speed of sound in the plasma

    Energy Technology Data Exchange (ETDEWEB)

    Leitao, Leonardo, E-mail: lleitao@mdp.edu.ar; Mégevand, Ariel, E-mail: megevand@mdp.edu.ar

    2015-02-15

    The growth of bubbles in cosmological first-order phase transitions involves nontrivial hydrodynamics. For that reason, the study of the propagation of phase transition fronts often requires several approximations. A frequently used approximation consists in describing the two phases as being composed only of radiation and vacuum energy (the so-called bag equation of state). We show that, in realistic models, the speed of sound in the low-temperature phase is generally smaller than that of radiation, and we study the hydrodynamics in such a situation. We find in particular that a new kind of hydrodynamical solution may be possible, which does not arise in the bag model. We obtain analytic results for the efficiency of the transfer of latent heat to bulk motions of the plasma, as a function of the speed of sound in each phase.

  15. SCRIC: a code dedicated to the detailed emission and absorption of heterogeneous NLTE plasmas; application to xenon EUV sources; SCRIC: un code pour calculer l'absorption et l'emission detaillees de plasmas hors equilibre, inhomogenes et etendus; application aux sources EUV a base de xenon

    Energy Technology Data Exchange (ETDEWEB)

    Gaufridy de Dortan, F. de

    2006-07-01

    Nearly all spectral opacity codes for LTE and NLTE plasmas rely on configurations approximate modelling or even supra-configurations modelling for mid Z plasmas. But in some cases, configurations interaction (either relativistic and non relativistic) induces dramatic changes in spectral shapes. We propose here a new detailed emissivity code with configuration mixing to allow for a realistic description of complex mid Z plasmas. A collisional radiative calculation. based on HULLAC precise energies and cross sections. determines the populations. Detailed emissivities and opacities are then calculated and radiative transfer equation is resolved for wide inhomogeneous plasmas. This code is able to cope rapidly with very large amount of atomic data. It is therefore possible to use complex hydrodynamic files even on personal computers in a very limited time. We used this code for comparison with Xenon EUV sources within the framework of nano-lithography developments. It appears that configurations mixing strongly shifts satellite lines and must be included in the description of these sources to enhance their efficiency. (author)

  16. Development of a coupling code for PWR reactor cavity radiation streaming calculation

    International Nuclear Information System (INIS)

    Zheng, Z.; Wu, H.; Cao, L.; Zheng, Y.; Zhang, H.; Wang, M.

    2012-01-01

    PWR reactor cavity radiation streaming is important for the safe of the personnel and equipment, thus calculation has to be performed to evaluate the neutron flux distribution around the reactor. For this calculation, the deterministic codes have difficulties in fine geometrical modeling and need huge computer resource; and the Monte Carlo codes require very long sampling time to obtain results with acceptable precision. Therefore, a coupling method has been developed to eliminate the two problems mentioned above in each code. In this study, we develop a coupling code named DORT2MCNP to link the Sn code DORT and Monte Carlo code MCNP. DORT2MCNP is used to produce a combined surface source containing top, bottom and side surface simultaneously. Because SDEF card is unsuitable for the combined surface source, we modify the SOURCE subroutine of MCNP and compile MCNP for this application. Numerical results demonstrate the correctness of the coupling code DORT2MCNP and show reasonable agreement between the coupling method and the other two codes (DORT and MCNP). (authors)

  17. History of one family of atmospheric radiative transfer codes

    Science.gov (United States)

    Anderson, Gail P.; Wang, Jinxue; Hoke, Michael L.; Kneizys, F. X.; Chetwynd, James H., Jr.; Rothman, Laurence S.; Kimball, L. M.; McClatchey, Robert A.; Shettle, Eric P.; Clough, Shepard (.; Gallery, William O.; Abreu, Leonard W.; Selby, John E. A.

    1994-12-01

    Beginning in the early 1970's, the then Air Force Cambridge Research Laboratory initiated a program to develop computer-based atmospheric radiative transfer algorithms. The first attempts were translations of graphical procedures described in a 1970 report on The Optical Properties of the Atmosphere, based on empirical transmission functions and effective absorption coefficients derived primarily from controlled laboratory transmittance measurements. The fact that spectrally-averaged atmospheric transmittance (T) does not obey the Beer-Lambert Law (T equals exp(-(sigma) (DOT)(eta) ), where (sigma) is a species absorption cross section, independent of (eta) , the species column amount along the path) at any but the finest spectral resolution was already well known. Band models to describe this gross behavior were developed in the 1950's and 60's. Thus began LOWTRAN, the Low Resolution Transmittance Code, first released in 1972. This limited initial effort has how progressed to a set of codes and related algorithms (including line-of-sight spectral geometry, direct and scattered radiance and irradiance, non-local thermodynamic equilibrium, etc.) that contain thousands of coding lines, hundreds of subroutines, and improved accuracy, efficiency, and, ultimately, accessibility. This review will include LOWTRAN, HITRAN (atlas of high-resolution molecular spectroscopic data), FASCODE (Fast Atmospheric Signature Code), and MODTRAN (Moderate Resolution Transmittance Code), their permutations, validations, and applications, particularly as related to passive remote sensing and energy deposition.

  18. Supernova Hydrodynamics on the Omega Laser. Final report

    International Nuclear Information System (INIS)

    Drake, R. Paul

    2004-01-01

    (B204)The fundamental motivation for our work is that supernovae are not well understood. Recent observations have clarified the depth of our ignorance, by producing observed phenomena that current theory and computer simulations cannot reproduce. Such theories and simulations involve, however, a number of physical mechanisms that have never been studied in isolation. We perform experiments, in compressible hydrodynamics and radiation hydrodynamics, relevant to supernovae and supernova remnants. These experiments produce phenomena in the laboratory that are believed, based on simulations, to be important to astrophysics but that have not been directly observed in either the laboratory or in an astrophysical system. During the period of this grant, we have focused on the scaling of an astrophysically relevant, radiative-precursor shock, on preliminary studies of collapsing radiative shocks, and on the multimode behavior and the three-dimensional, deeply nonlinear evolution of the Rayleigh-Taylor (RT) instability at a decelerating, embedded interface. These experiments required strong compression and decompression, strong shocks (Mach ∼10 or greater), flexible geometries, and very smooth laser beams, which means that the 60-beam Omega laser is the only facility capable of carrying out this program

  19. Development of Parallel Computing Framework to Enhance Radiation Transport Code Capabilities for Rare Isotope Beam Facility Design

    Energy Technology Data Exchange (ETDEWEB)

    Kostin, Mikhail [Michigan State Univ., East Lansing, MI (United States); Mokhov, Nikolai [Fermi National Accelerator Lab. (FNAL), Batavia, IL (United States); Niita, Koji [Research Organization for Information Science and Technology, Ibaraki-ken (Japan)

    2013-09-25

    A parallel computing framework has been developed to use with general-purpose radiation transport codes. The framework was implemented as a C++ module that uses MPI for message passing. It is intended to be used with older radiation transport codes implemented in Fortran77, Fortran 90 or C. The module is significantly independent of radiation transport codes it can be used with, and is connected to the codes by means of a number of interface functions. The framework was developed and tested in conjunction with the MARS15 code. It is possible to use it with other codes such as PHITS, FLUKA and MCNP after certain adjustments. Besides the parallel computing functionality, the framework offers a checkpoint facility that allows restarting calculations with a saved checkpoint file. The checkpoint facility can be used in single process calculations as well as in the parallel regime. The framework corrects some of the known problems with the scheduling and load balancing found in the original implementations of the parallel computing functionality in MARS15 and PHITS. The framework can be used efficiently on homogeneous systems and networks of workstations, where the interference from the other users is possible.

  20. A mathematical model for radiation hydrodynamics

    Directory of Open Access Journals (Sweden)

    Sebastiano Pennisi

    1990-11-01

    Full Text Available We adopt here the idea of describing a radiation field by means of the radiation energy density E and the radiative flux vector F which must satisfy a set of evolution equations; in these equations an unknown tensorial function P(E,F appears that is determined by the methods of extended thermodynamics.

  1. Images en mouvement stockage, repérage, indexation

    CERN Document Server

    Turner, James

    1998-01-01

    L'avènement puis la fusion des nouveaux modes de communication que sont l'informatique, les télécommunications et l'audiovisuel ont mis à la portée de tous une grande quantité d'images fixes et en mouvement dont la conservation et le repérage risquent de prendre des proportions démesurées. Le présent ouvrage veut offrir aux responsables de collection des repères pour aborder la problématique de l'indexation des images et faciliter l'accès des usagers à ces images.

  2. BALTORO a general purpose code for coupling discrete ordinates and Monte-Carlo radiation transport calculations

    International Nuclear Information System (INIS)

    Zazula, J.M.

    1983-01-01

    The general purpose code BALTORO was written for coupling the three-dimensional Monte-Carlo /MC/ with the one-dimensional Discrete Ordinates /DO/ radiation transport calculations. The quantity of a radiation-induced /neutrons or gamma-rays/ nuclear effect or the score from a radiation-yielding nuclear effect can be analysed in this way. (author)

  3. Code Cactus; Code Cactus

    Energy Technology Data Exchange (ETDEWEB)

    Fajeau, M; Nguyen, L T; Saunier, J [Commissariat a l' Energie Atomique, Centre d' Etudes Nucleaires de Saclay, 91 - Gif-sur-Yvette (France)

    1966-09-01

    This code handles the following problems: -1) Analysis of thermal experiments on a water loop at high or low pressure; steady state or transient behavior; -2) Analysis of thermal and hydrodynamic behavior of water-cooled and moderated reactors, at either high or low pressure, with boiling permitted; fuel elements are assumed to be flat plates: - Flowrate in parallel channels coupled or not by conduction across plates, with conditions of pressure drops or flowrate, variable or not with respect to time is given; the power can be coupled to reactor kinetics calculation or supplied by the code user. The code, containing a schematic representation of safety rod behavior, is a one dimensional, multi-channel code, and has as its complement (FLID), a one-channel, two-dimensional code. (authors) [French] Ce code permet de traiter les problemes ci-dessous: 1. Depouillement d'essais thermiques sur boucle a eau, haute ou basse pression, en regime permanent ou transitoire; 2. Etudes thermiques et hydrauliques de reacteurs a eau, a plaques, a haute ou basse pression, ebullition permise: - repartition entre canaux paralleles, couples on non par conduction a travers plaques, pour des conditions de debit ou de pertes de charge imposees, variables ou non dans le temps; - la puissance peut etre couplee a la neutronique et une representation schematique des actions de securite est prevue. Ce code (Cactus) a une dimension d'espace et plusieurs canaux, a pour complement Flid qui traite l'etude d'un seul canal a deux dimensions. (auteurs)

  4. Diagnostics of red-shifted H-alpha line emission from a C-class flare with full non-LTE radiative and hydrodynamic approach

    Science.gov (United States)

    Druett, M. K.; Zharkova, V. V.; Scullion, E.; Zharkov, S.; Matthews, S. A.

    2016-12-01

    We analyse H-alpha line profiles with strong redshifts during the C1.8 flare on 1st July 2012 obtained from the Swedish Solar Telescope (SST) closely resembling the previous observations (Wuelser and Marti, 1989). The flare has a magnetic field configuration with two levels of loop structures. The kernels with red shifts are observed in one of the H-alpha ribbons in the south-west location formed after the main impulse recorded in the north-east. The locations of H-alpha kernels with red shifts reveal close temporal and spatial correlation with weaker HXR signatures and coincide with the locations of coronal jets observed with AIA/SDO. For interpretation we apply a revised 1D hydrodynamic and non-LTE (NLTE) radiative model for 5 level plus continuum model hydrogen atom (Druett & Zharkova, 2016) considering radiative, thermal and non-thermal excitation and ionisation by beam electrons with the updated beam densities (Zharkova & Dobranskis, 2016) and analytical excitation/ionisation rates (Zharkova& Kobylinskijj, 1993). We find the simultaneous solutions of steady state and radiative transfer equations in all optically-thick lines and continua. The electron and ion temperatures, ambient density and macrovelocity of the ambient plasma are derived from a 1D hydrodynamic model with initial condition of the pre-flaring photosphere for the two fluid ambient plasma heated by beam electrons (Zharkova & Zharkov, 2007). We simulate distributions over precipitation depth of ionisation and departure coefficients for all the hydrogen atom transitions including the deviation of ionisation from Saha equation affected by non-thermal electron beams. We show that in the very first seconds after the beam onset Balmer line profiles are sensitive to the effect of beam electrons. The combination of the additional ionisation caused by beam electrons leading to a very strong Stark effect in Balmer lines with the hydrodynamic heating and formation of a low temperature shock in the

  5. A physics informed emulator for laser-driven radiating shock simulations

    KAUST Repository

    McClarren, Ryan G.; Ryu, D.; Paul Drake, R.; Grosskopf, Michael; Bingham, Derek; Chou, Chuan-Chih; Fryxell, Bruce; van der Holst, Bart; Paul Holloway, James; Kuranz, Carolyn C.; Mallick, Bani; Rutter, Erica; Torralva, Ben R.

    2011-01-01

    This work discusses the uncertainty quantification aspect of quantification of margin and uncertainty (QMU) in the context of two linked computer codes. Specifically, we present a physics based reduction technique to deal with functional data from the first code and then develop an emulator for this reduced data. Our particular application deals with conditions created by laser deposition in a radiating shock experiment modeled using the Lagrangian, radiation-hydrodynamics code Hyades. Our goal is to construct an emulator and perform a sensitivity analysis of the functional output from Hyades to be used as an initial condition for a three-dimensional code that will compute the evolution of the radiating shock at later times. Initial attempts at purely statistical data reduction techniques, were not successful at reducing the number of parameters required to describe the Hyades output. We decided on an alternate approach using physical arguments to decide what features/locations of the output were relevant (e.g., the location of the shock front or the location of the maximum pressure) and then used a piecewise linear fit between these locations. This reduced the number of outputs needed from the emulator to 40, down from the O(1000) points in the Hyades output. Then, using Bayesian MARS and Gaussian process regression, we were able to build emulators for Hyades and study sensitivities to input parameters. © 2011 Elsevier Ltd. All rights reserved.

  6. A physics informed emulator for laser-driven radiating shock simulations

    KAUST Repository

    McClarren, Ryan G.

    2011-09-01

    This work discusses the uncertainty quantification aspect of quantification of margin and uncertainty (QMU) in the context of two linked computer codes. Specifically, we present a physics based reduction technique to deal with functional data from the first code and then develop an emulator for this reduced data. Our particular application deals with conditions created by laser deposition in a radiating shock experiment modeled using the Lagrangian, radiation-hydrodynamics code Hyades. Our goal is to construct an emulator and perform a sensitivity analysis of the functional output from Hyades to be used as an initial condition for a three-dimensional code that will compute the evolution of the radiating shock at later times. Initial attempts at purely statistical data reduction techniques, were not successful at reducing the number of parameters required to describe the Hyades output. We decided on an alternate approach using physical arguments to decide what features/locations of the output were relevant (e.g., the location of the shock front or the location of the maximum pressure) and then used a piecewise linear fit between these locations. This reduced the number of outputs needed from the emulator to 40, down from the O(1000) points in the Hyades output. Then, using Bayesian MARS and Gaussian process regression, we were able to build emulators for Hyades and study sensitivities to input parameters. © 2011 Elsevier Ltd. All rights reserved.

  7. The development and application of advanced analytical methods to commercial ICF reactor chambers. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Cousseau, P.; Engelstad, R.; Henderson, D.L. [and others

    1997-10-01

    Progress is summarized in this report for each of the following tasks: (1) multi-dimensional radiation hydrodynamics computer code development; (2) 2D radiation-hydrodynamic code development; (3) ALARA: analytic and Laplacian adaptive radioactivity analysis -- a complete package for analysis of induced activation; (4) structural dynamics modeling of ICF reactor chambers; and (5) analysis of self-consistent target chamber clearing.

  8. The development and application of advanced analytical methods to commercial ICF reactor chambers. Final report

    International Nuclear Information System (INIS)

    Cousseau, P.; Engelstad, R.; Henderson, D.L.

    1997-10-01

    Progress is summarized in this report for each of the following tasks: (1) multi-dimensional radiation hydrodynamics computer code development; (2) 2D radiation-hydrodynamic code development; (3) ALARA: analytic and Laplacian adaptive radioactivity analysis -- a complete package for analysis of induced activation; (4) structural dynamics modeling of ICF reactor chambers; and (5) analysis of self-consistent target chamber clearing

  9. Evaluation of incompressible hydrodynamic mass methods in reactor applications

    International Nuclear Information System (INIS)

    Takeuchi, K.

    1981-01-01

    The hydrodynamic (or virtual) mass approach is evaluated by comparison of structural responses computed by the hydrodynamic mass method with those computed by MULTIFLEX code for a fluid/structure interaction problem with fluid compression effects taken into account. A sample problem used in that evaluation is a simplified 1-D PWR model which is first subjected to a LOCA type transient. The time history of structural displacement computed with the hydrodynamic mass approach is compared with MULTIFLEX results. The frequencies of structural oscillation of these two computations agree. The amplitudes disagree by more than 50%, which is attributed to the effect of fluid compressibility. For the seismic study, sinusoidal forces are applied to the floor at the vessel support. The system responses are expressed by the response functions or the maximum values of the barrel/vessel relative displacements as the applied frequency is varied. The response functions are computed by the hydrodynamic mass method and by MULTIFLEX for evaluation of the virtual mass method. For the pump pulsation study, sinusoidal pressure oscillations are applied at the pump outlet and the response functions are computed as above. 12 refs

  10. Disruptive Innovation in Numerical Hydrodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Waltz, Jacob I. [Los Alamos National Laboratory

    2012-09-06

    We propose the research and development of a high-fidelity hydrodynamic algorithm for tetrahedral meshes that will lead to a disruptive innovation in the numerical modeling of Laboratory problems. Our proposed innovation has the potential to reduce turnaround time by orders of magnitude relative to Advanced Simulation and Computing (ASC) codes; reduce simulation setup costs by millions of dollars per year; and effectively leverage Graphics Processing Unit (GPU) and future Exascale computing hardware. If successful, this work will lead to a dramatic leap forward in the Laboratory's quest for a predictive simulation capability.

  11. Manejo da irrigação na cultura do crisântemo em vaso, cultivar rage, cultivado em ambiente protegido Irrigation schedule in pot chrysanthemum, cultivar rage, grown in greenhouse

    Directory of Open Access Journals (Sweden)

    Maryzélia F. de Farias

    2004-04-01

    Full Text Available Dentre as dificuldades que os produtores têm encontrado ao adotarem o cultivo em ambiente protegido, destaca-se a falta de dados específicos sobre o uso racional da água e o desconhecimento da quantidade e do momento de irrigar. Esta pesquisa foi desenvolvida na propriedade de um produtor, no Distrito de Holambra II, região de Paranapanema - SP, em cultivos rotineiramente desenvolvidos pelo produtor, buscando melhor representatividade dos dados obtidos. O objetivo principal deste experimento foi identificar a tensão de água no solo que pudesse resultar em melhor qualidade comercial da cultivar de crisântemo "Rage", cultivado em vaso e mantido em ambiente protegido. O delineamento experimental foi o inteiramente casualizado, com duas repetições. Os tratamentos foram definidos por seis níveis de tensão de água: -2; -3; -4; -6; -10 e -30 kPa. Para cada tensão, foram calculadas a altura correspondente na coluna de mercúrio do tensiômetro, as lâminas e o tempo de irrigação. Os resultados obtidos demonstraram que a cultivar Rage obteve a maior porcentagem de vasos de alta qualidade (A1 no tratamento irrigado com a tensão de -4 kPa. O tratamento irrigado, quando atingia -30 kPa, resultou na menor porcentagem de vasos A1.The most important difficulty that the producers have been found to adopt the cultivation in plastic greenhouses is the lack of specific data on the rational use of the water and informations about when and how much water apply. This research was developed in a farm in Paranapanema - SP, Brazil, with tradition in pot chrysanthemum grow. The main objective was to identify the soil water tension that could result in better commercial quality of chrysanthemum Rage, cultivated in pot and maintained in greenhouse. The treatments were defined for six levels of substrate water tension: -2; -3; -4; -6; -10 and -30 kPa. The irrigation time was defined for each tension and also the equivalent height int the mercury column of

  12. A physics informed emulator for laser-driven radiating shock simulations

    International Nuclear Information System (INIS)

    McClarren, Ryan G.; Ryu, D.; Paul Drake, R.; Grosskopf, Michael; Bingham, Derek; Chou, Chuan-Chih; Fryxell, Bruce; Holst, Bart van der; Paul Holloway, James; Kuranz, Carolyn C.; Mallick, Bani; Rutter, Erica; Torralva, Ben R.

    2011-01-01

    This work discusses the uncertainty quantification aspect of quantification of margin and uncertainty (QMU) in the context of two linked computer codes. Specifically, we present a physics based reduction technique to deal with functional data from the first code and then develop an emulator for this reduced data. Our particular application deals with conditions created by laser deposition in a radiating shock experiment modeled using the Lagrangian, radiation-hydrodynamics code Hyades. Our goal is to construct an emulator and perform a sensitivity analysis of the functional output from Hyades to be used as an initial condition for a three-dimensional code that will compute the evolution of the radiating shock at later times. Initial attempts at purely statistical data reduction techniques, were not successful at reducing the number of parameters required to describe the Hyades output. We decided on an alternate approach using physical arguments to decide what features/locations of the output were relevant (e.g., the location of the shock front or the location of the maximum pressure) and then used a piecewise linear fit between these locations. This reduced the number of outputs needed from the emulator to 40, down from the O(1000) points in the Hyades output. Then, using Bayesian MARS and Gaussian process regression, we were able to build emulators for Hyades and study sensitivities to input parameters. - Highlights: → Uncertainty quantification for two linked computer codes is investigated. → We perform physics-based dimension reduction on the code output. → This reduces the uncertain degrees of freedom from hundreds to tens.

  13. The proinflammatory RAGE/NF-κB pathway is involved in neuronal damage and reactive gliosis in a model of sleep apnea by intermittent hypoxia.

    Science.gov (United States)

    Angelo, Maria Florencia; Aguirre, Alejandra; Avilés Reyes, Rolando X; Villarreal, Alejandro; Lukin, Jerónimo; Melendez, Matías; Vanasco, Virginia; Barker, Phil; Alvarez, Silvia; Epstein, Alberto; Jerusalinsky, Diana; Ramos, Alberto Javier

    2014-01-01

    Sleep apnea (SA) causes long-lasting changes in neuronal circuitry, which persist even in patients successfully treated for the acute effects of the disease. Evidence obtained from the intermittent hypoxia (IH) experimental model of SA has shown neuronal death, impairment in learning and memory and reactive gliosis that may account for cognitive and structural alterations observed in human patients. However, little is known about the mechanism controlling these deleterious effects that may be useful as therapeutic targets in SA. The Receptor for Advanced Glycation End products (RAGE) and its downstream effector Nuclear Factor Kappa B (NF-κB) have been related to neuronal death and astroglial conversion to the pro-inflammatory neurodegenerative phenotype. RAGE expression and its ligand S100B were shown to be increased in experimental models of SA. We here used dissociated mixed hippocampal cell cultures and male Wistar rats exposed to IH cycles and observed that NF-κB is activated in glial cells and neurons after IH. To disclose the relative contribution of the S100B/RAGE/NF-κB pathway to neuronal damage and reactive gliosis after IH we performed sequential loss of function studies using RAGE or S100B neutralizing antibodies, a herpes simplex virus (HSV)-derived amplicon vector that induces the expression of RAGEΔcyto (dominant negative RAGE) and a chemical blocker of NF-κB. Our results show that NF-κB activation peaks 3 days after IH exposure, and that RAGE or NF-κB blockage during this critical period significantly improves neuronal survival and reduces reactive gliosis. Both in vitro and in vivo, S100B blockage altered reactive gliosis but did not have significant effects on neuronal survival. We conclude that both RAGE and downstream NF-κB signaling are centrally involved in the neuronal alterations found in SA models, and that blockage of these pathways is a tempting strategy for preventing neuronal degeneration and reactive gliosis in SA.

  14. The proinflammatory RAGE/NF-κB pathway is involved in neuronal damage and reactive gliosis in a model of sleep apnea by intermittent hypoxia.

    Directory of Open Access Journals (Sweden)

    Maria Florencia Angelo

    Full Text Available Sleep apnea (SA causes long-lasting changes in neuronal circuitry, which persist even in patients successfully treated for the acute effects of the disease. Evidence obtained from the intermittent hypoxia (IH experimental model of SA has shown neuronal death, impairment in learning and memory and reactive gliosis that may account for cognitive and structural alterations observed in human patients. However, little is known about the mechanism controlling these deleterious effects that may be useful as therapeutic targets in SA. The Receptor for Advanced Glycation End products (RAGE and its downstream effector Nuclear Factor Kappa B (NF-κB have been related to neuronal death and astroglial conversion to the pro-inflammatory neurodegenerative phenotype. RAGE expression and its ligand S100B were shown to be increased in experimental models of SA. We here used dissociated mixed hippocampal cell cultures and male Wistar rats exposed to IH cycles and observed that NF-κB is activated in glial cells and neurons after IH. To disclose the relative contribution of the S100B/RAGE/NF-κB pathway to neuronal damage and reactive gliosis after IH we performed sequential loss of function studies using RAGE or S100B neutralizing antibodies, a herpes simplex virus (HSV-derived amplicon vector that induces the expression of RAGEΔcyto (dominant negative RAGE and a chemical blocker of NF-κB. Our results show that NF-κB activation peaks 3 days after IH exposure, and that RAGE or NF-κB blockage during this critical period significantly improves neuronal survival and reduces reactive gliosis. Both in vitro and in vivo, S100B blockage altered reactive gliosis but did not have significant effects on neuronal survival. We conclude that both RAGE and downstream NF-κB signaling are centrally involved in the neuronal alterations found in SA models, and that blockage of these pathways is a tempting strategy for preventing neuronal degeneration and reactive gliosis in SA.

  15. Numerical simulations of glass impacts using smooth particle hydrodynamics

    International Nuclear Information System (INIS)

    Mandell, D.A.; Wingate, C.A.

    1995-01-01

    As part of a program to develop advanced hydrocode design tools, we have implemented a brittle fracture model for glass into the SPHINX smooth particle hydrodynamics code. We have evaluated this model and the code by predicting data from one-dimensional flyer plate impacts into glass. Since fractured glass properties, which are needed in the model, are not available, we did sensitivity studies of these properties, as well as sensitivity studies to determine the number of particles needed in the calculations. The numerical results are in good agreement with the data

  16. Association of the receptor for advanced glycation end-products (RAGE gene polymorphisms in Malaysian patients with chronic kidney disease

    Directory of Open Access Journals (Sweden)

    Foo Nian Wong

    2016-04-01

    Full Text Available Background: Chronic kidney disease (CKD is a condition associated with progressive loss of kidney function and kidney damage. The two common causes of CKD are diabetes mellitus and hypertension. Other causes of CKD also include polycystic kidney disease, obstructive uropathy and primary glomerulonephritis. The receptor for advanced glycation end-products (RAGE is a multi-ligand cell surface receptor of the immunoglobulin superfamily and it has been associated with kidney disease in both non-diabetic and diabetic patients. Presently, data on the association between RAGE polymorphisms and CKD in the Malaysian population is limited, while numerous studies have reported associations of RAGE polymorphisms with diabetic complications in other populations. The present study aims to explore the possibility of using RAGE polymorphisms as candidate markers of CKD in Malaysian population by using association analysis. Methods: A total of 102 non-diabetic CKD patients, 204 diabetic CKD patients and 345 healthy controls were enrolled in the study. DNA isolated from blood samples were subjected to genotyping of RAGE G82S, −374T/A, −429T/C, 1704G/T and 2184A/G polymorphisms using real-time polymerase chain reaction (PCR. The 63-bp deletion, a polymorphism in the RAGE gene promoter, was genotyped using conventional PCR method and visualized using agarose gel electrophoresis. The collective frequencies of genotypes with at least one copy of the minor alleles of the four polymorphisms were compared between the non-diabetic CKD patients, diabetic CKD patients and healthy controls. Results: After adjustment of age, gender and ethnic groups in binary logistic regression analysis, the G82S CT + TT genotypes were associated with non-diabetic CKD patients when compared with diabetic CKD patients (p = 0.015, OR = 1.896, 95% CI = 1.132–3.176. After further adjustment of CKD comorbidities, the G82S CT + TT genotypes were still associated with non-diabetic CKD

  17. Treating voxel geometries in radiation protection dosimetry with a patched version of the Monte Carlo codes MCNP and MCNPX.

    Science.gov (United States)

    Burn, K W; Daffara, C; Gualdrini, G; Pierantoni, M; Ferrari, P

    2007-01-01

    The question of Monte Carlo simulation of radiation transport in voxel geometries is addressed. Patched versions of the MCNP and MCNPX codes are developed aimed at transporting radiation both in the standard geometry mode and in the voxel geometry treatment. The patched code reads an unformatted FORTRAN file derived from DICOM format data and uses special subroutines to handle voxel-to-voxel radiation transport. The various phases of the development of the methodology are discussed together with the new input options. Examples are given of employment of the code in internal and external dosimetry and comparisons with results from other groups are reported.

  18. Implication of advanced glycation end products (Ages) and their receptor (Rage) on myocardial contractile and mitochondrial functions.

    Science.gov (United States)

    Neviere, Remi; Yu, Yichi; Wang, Lei; Tessier, Frederic; Boulanger, Eric

    2016-08-01

    Advanced glycation end products (AGEs) play an important role for the development and/or progression of cardiovascular diseases, mainly through induction of oxidative stress and inflammation. AGEs are a heterogeneous group of molecules formed by non-enzymatic reaction of reducing sugars with amino acids of proteins, lipids and nucleic acids. AGEs are mainly formed endogenously, while recent studies suggest that diet constitutes an important exogenous source of AGEs. The presence and accumulation of AGEs in various cardiac cell types affect extracellular and intracellular structure and function. AGEs contribute to a variety of microvascular and macrovascular complications through the formation of cross-links between molecules in the basement membrane of the extracellular matrix and by engaging the receptor for advanced glycation end products (RAGE). Activation of RAGE by AGEs causes up regulation of the transcription factor nuclear factor-κB and its target genes. of the RAGE engagement stimulates oxidative stress, evokes inflammatory and fibrotic reactions, which all contribute to the development and progression of devastating cardiovascular disorders. This review discusses potential targets of glycation in cardiac cells, and underlying mechanisms that lead to heart failure with special interest on AGE-induced mitochondrial dysfunction in the myocardium.

  19. SSS: A code for computing one dimensional shock and detonation wave propagation

    International Nuclear Information System (INIS)

    Sun Chengwei

    1986-01-01

    The one-dimensional hydrodynamic code SSS for shock and detonation wave propagation in inert and reactive media is described. The elastic-plastic-hydrodynamic model and four burn techniques (the Arrhenius law, C-J volume, sharp shock and Forest Fire) are used. There are HOM and JWL options for the state equation of detonation products. Comparing with the SIN code published by LANL, the SSS code has several new options: laser effects, blast waves, diverging and instantaneous detonation waves with arbitrary initiation positions. Two examples are given to compare the SSS and SIN calculations with the experimental data

  20. The use of Monte Carlo radiation transport codes in radiation physics and dosimetry

    CERN Multimedia

    CERN. Geneva; Ferrari, Alfredo; Silari, Marco

    2006-01-01

    Transport and interaction of electromagnetic radiation Interaction models and simulation schemes implemented in modern Monte Carlo codes for the simulation of coupled electron-photon transport will be briefly reviewed. In these codes, photon transport is simulated by using the detailed scheme, i.e., interaction by interaction. Detailed simulation is easy to implement, and the reliability of the results is only limited by the accuracy of the adopted cross sections. Simulations of electron and positron transport are more difficult, because these particles undergo a large number of interactions in the course of their slowing down. Different schemes for simulating electron transport will be discussed. Condensed algorithms, which rely on multiple-scattering theories, are comparatively fast, but less accurate than mixed algorithms, in which hard interactions (with energy loss or angular deflection larger than certain cut-off values) are simulated individually. The reliability, and limitations, of electron-interacti...

  1. Verification test of the SURF and SURFplus models in xRage

    Energy Technology Data Exchange (ETDEWEB)

    Menikoff, Ralph [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-05-18

    As a verification test of the SURF and SURFplus models in the xRage code we use a propagating underdriven detonation wave in 1-D. This is about the only test cases for which an accurate solution can be determined based on the theoretical structure of the solution. The solution consists of a steady ZND reaction zone profile joined with a scale invariant rarefaction or Taylor wave and followed by a constant state. The end of the reaction profile and the head of the rarefaction coincide with the sonic CJ state of the detonation wave. The constant state is required to match a rigid wall boundary condition. For a test case, we use PBX 9502 with the same EOS and burn rate as previously used to test the shock detector algorithm utilized by the SURF model. The detonation wave is propagated for 10 μs (slightly under 80mm). As expected, the pointwise errors are largest in the neighborhood of discontinuities; pressure discontinuity at the lead shock front and pressure derivative discontinuities at the head and tail of the rarefaction. As a quantitative measure of the overall accuracy, the L2 norm of the difference of the numerical pressure and the exact solution is used. Results are presented for simulations using both a uniform grid and an adaptive grid that refines the reaction zone.

  2. Study and application of the ANISN and DOT 3.5 codes to problems in nuclear radiation shielding

    International Nuclear Information System (INIS)

    Otto, A.C.

    1983-01-01

    The application of the Sn transport codes ANISN and DOT 3.5 to problems in radiation shielding is reviewed. In addition, a large array of codes involved in radiation shielding calculations is described and applied in this work. The ANISN and DOT 3.5 codes solve the multigroup transport equation in plane, cylindrical and spherical geometries, the first in one dimension and the second in two dimensions, by using the Sn approximation and were designed to solve coupled neutron-photon transport problems commonly found in reactor shielding calculations. In this work the numerical methods used in these codes are reviewed and their basic application to deep-penetration and void problems is discussed. Benchmark problems are solved by employing the array of codes previously mentioned. In particular, the ability of the ISOFLUXO program coupled to the DOT 3.5 code of mapping contours of regions with approximately the same scalar fluxes is illustrated, showing that they can be efficiently used in shielding analysis. (Author) [pt

  3. 3D-TRANS-2003, Workshop on Common Tools and Interfaces for Radiation Transport Codes

    International Nuclear Information System (INIS)

    2004-01-01

    Description: Contents proceedings of Workshop on Common Tools and Interfaces for Deterministic Radiation Transport, for Monte Carlo and Hybrid Codes with a proposal to develop the following: GERALD - A General Environment for Radiation Analysis and Design. GERALD intends to create a unifying software environment where the user can define, solve and analyse a nuclear radiation transport problem using available numerical tools seamlessly. This environment will serve many purposes: teaching, research, industrial needs. It will also help to preserve the existing analytical and numerical knowledge base. This could represent a significant step towards solving the legacy problem. This activity should contribute to attracting young engineers to nuclear science and engineering and contribute to competence and knowledge preservation and management. This proposal was made at the on Workshop on C ommon Tools and Interfaces for Deterministic Radiation Transport, for Monte Carlo and Hybrid Codes , held from 25-26 September 2003 in connection with the conference SNA-2003. A first success with the development of such tools was achieved with the BOT3P2.0 and 3.0 codes providing an easy procedure and mechanism for defining and displaying 3D geometries and materials both in the form of refineable meshes for deterministic codes or Monte Carlo geometries consistent with deterministic models. Advanced SUSD: Improved tools for Sensitivity/Uncertainty Analysis. The development of tools for the analysis and estimation of sensitivities and uncertainties in calculations, or their propagation through complex computational schemes, in the field of neutronics, thermal hydraulics and also thermo-mechanics is of increasing importance for research and engineering applications. These tools allow establishing better margins for engineering designs and for the safe operation of nuclear facilities. Such tools are not sufficiently developed, but their need is increasingly evident in many activities

  4. Hydrodynamic model of hydrogen-flame propagation in reactor vessels

    International Nuclear Information System (INIS)

    Baer, M.R.; Ratzel, A.C.

    1982-01-01

    A hydrodynamic model for hydrogen flame propagation in reactor geometries is presented. This model is consistent with the theory of slow combustion in which the gasdynamic field equations are treated in the limit of small Mach numbers. To the lowest order, pressure is spatially uniform. The flame is treated as a density and entropy discontinuity which propagates at prescribed burning velocities, corresponding to laminar or turbulent flames. Radiation cooling of the burned combustion gases and possible preheating of the unburned gases during propagation of the flame is included using a molecular gas-band thermal radiation model. Application of this model has been developed for 1-D variable area flame propagation. Multidimensional effects induced by hydrodynamics and buoyancy are introduced as a correction to the burn velocity (which reflects a modification of planar flame surface to a distorted surface) using experimentally measured pressure-rise time data for hydrogen/air deflagrations in cylindrical vessels

  5. Simulations of Converging Shock Collisions for Shock Ignition

    Science.gov (United States)

    Sauppe, Joshua; Dodd, Evan; Loomis, Eric

    2016-10-01

    Shock ignition (SI) has been proposed as an alternative to achieving high gain in inertial confinement fusion (ICF) targets. A central hot spot below the ignition threshold is created by an initial compression pulse, and a second laser pulse drives a strong converging shock into the fuel. The collision between the rebounding shock from the compression pulse and the converging shock results in amplification of the converging shock and increases the hot spot pressure above the ignition threshold. We investigate shock collision in SI drive schemes for cylindrical targets with a polystyrene foam interior using radiation-hydrodynamics simulations with the RAGE code. The configuration is similar to previous targets fielded on the Omega laser. The CH interior results in a lower convergence ratio and the cylindrical geometry facilitates visualization of the shock transit using an axial X-ray backlighter, both of which are important for comparison to potential experimental measurements. One-dimensional simulations are used to determine shock timing, and the effects of low mode asymmetries in 2D computations are also quantified. LA-UR-16-24773.

  6. Nifedipine inhibits advanced glycation end products (AGEs) and their receptor (RAGE) interaction-mediated proximal tubular cell injury via peroxisome proliferator-activated receptor-gamma activation

    Energy Technology Data Exchange (ETDEWEB)

    Matsui, Takanori [Department of Pathophysiology and Therapeutics of Diabetic Vascular Complications, Kurume University School of Medicine, Kurume (Japan); Yamagishi, Sho-ichi, E-mail: shoichi@med.kurume-u.ac.jp [Department of Pathophysiology and Therapeutics of Diabetic Vascular Complications, Kurume University School of Medicine, Kurume (Japan); Takeuchi, Masayoshi [Department of Pathophysiological Science, Faculty of Pharmaceutical Science, Hokuriku University, Kanazawa (Japan); Ueda, Seiji; Fukami, Kei; Okuda, Seiya [Department of Medicine, Kurume University School of Medicine, Kurume (Japan)

    2010-07-23

    Research highlights: {yields} Nifedipine inhibited the AGE-induced up-regulation of RAGE mRNA levels in tubular cells, which was prevented by GW9662, an inhibitor of peroxisome proliferator-activated receptor-{gamma}. {yields} GW9662 treatment alone increased RAGE mRNA levels in tubular cells. {yields} Nifedipine inhibited the AGE-induced reactive oxygen species generation, NF-{kappa}B activation and increases in intercellular adhesion molecule-1 and transforming growth factor-{beta} gene expression in tubular cells, all of which were blocked by GW9662. -- Abstract: There is a growing body of evidence that advanced glycation end products (AGEs) and their receptor (RAGE) interaction evokes oxidative stress generation and subsequently elicits inflammatory and fibrogenic reactions, thereby contributing to the development and progression of diabetic nephropathy. We have previously found that nifedipine, a calcium-channel blocker (CCB), inhibits the AGE-induced mesangial cell damage in vitro. However, effects of nifedipine on proximal tubular cell injury remain unknown. We examined here whether and how nifedipine blocked the AGE-induced tubular cell damage. Nifedipine, but not amlodipine, a control CCB, inhibited the AGE-induced up-regulation of RAGE mRNA levels in tubular cells, which was prevented by the simultaneous treatment of GW9662, an inhibitor of peroxisome proliferator-activated receptor-{gamma} (PPAR{gamma}). GW9662 treatment alone was found to increase RAGE mRNA levels in tubular cells. Further, nifedipine inhibited the AGE-induced reactive oxygen species generation, NF-{kappa}B activation and increases in intercellular adhesion molecule-1 and transforming growth factor-beta gene expression in tubular cells, all of which were blocked by GW9662. Our present study provides a unique beneficial aspect of nifedipine on diabetic nephropathy; it could work as an anti-oxidative and anti-inflammatory agent against AGEs in tubular cells by suppressing RAGE expression

  7. Nifedipine inhibits advanced glycation end products (AGEs) and their receptor (RAGE) interaction-mediated proximal tubular cell injury via peroxisome proliferator-activated receptor-gamma activation

    International Nuclear Information System (INIS)

    Matsui, Takanori; Yamagishi, Sho-ichi; Takeuchi, Masayoshi; Ueda, Seiji; Fukami, Kei; Okuda, Seiya

    2010-01-01

    Research highlights: → Nifedipine inhibited the AGE-induced up-regulation of RAGE mRNA levels in tubular cells, which was prevented by GW9662, an inhibitor of peroxisome proliferator-activated receptor-γ. → GW9662 treatment alone increased RAGE mRNA levels in tubular cells. → Nifedipine inhibited the AGE-induced reactive oxygen species generation, NF-κB activation and increases in intercellular adhesion molecule-1 and transforming growth factor-β gene expression in tubular cells, all of which were blocked by GW9662. -- Abstract: There is a growing body of evidence that advanced glycation end products (AGEs) and their receptor (RAGE) interaction evokes oxidative stress generation and subsequently elicits inflammatory and fibrogenic reactions, thereby contributing to the development and progression of diabetic nephropathy. We have previously found that nifedipine, a calcium-channel blocker (CCB), inhibits the AGE-induced mesangial cell damage in vitro. However, effects of nifedipine on proximal tubular cell injury remain unknown. We examined here whether and how nifedipine blocked the AGE-induced tubular cell damage. Nifedipine, but not amlodipine, a control CCB, inhibited the AGE-induced up-regulation of RAGE mRNA levels in tubular cells, which was prevented by the simultaneous treatment of GW9662, an inhibitor of peroxisome proliferator-activated receptor-γ (PPARγ). GW9662 treatment alone was found to increase RAGE mRNA levels in tubular cells. Further, nifedipine inhibited the AGE-induced reactive oxygen species generation, NF-κB activation and increases in intercellular adhesion molecule-1 and transforming growth factor-beta gene expression in tubular cells, all of which were blocked by GW9662. Our present study provides a unique beneficial aspect of nifedipine on diabetic nephropathy; it could work as an anti-oxidative and anti-inflammatory agent against AGEs in tubular cells by suppressing RAGE expression via PPARγ activation.

  8. Progress on the physics of ignition for radiation driven inertial confinement fusion (ICF) targets

    International Nuclear Information System (INIS)

    Lindl, J.D.; Marinak, M.M.

    1996-09-01

    Extensive modeling of proposed National Ignition Facility (NIF) ignition targets has resulted in a variety of targets using different materials in the fuel shell, using driving temperatures which range from 250-300 eV, and requiring energies from 15 W/cm 2 for this type of hohlraum. The symmetry in Nova gas- filled hohlraums is affected by the gas fill. A large body of evidence now exists which indicates that this effect is due to laser beam filamentation which can be largely controlled by beam smoothing. We present here the firs 3-D simulations of hydrodynamic instability for the NIF point design capsule. These simulations, with the HYDRA radiation hydrodynamics code, indicate that spikes can penetrate up to 10 μm into the 30μm radius hot spot before ignition is quenched. Using capsules whose surface is modified by laser ablation, Nova experiments have been used to quantify the degradation of implosions subject to near NIF levels of hydrodynamic instability

  9. 3D PiC code investigations of Auroral Kilometric Radiation mechanisms

    International Nuclear Information System (INIS)

    Gillespie, K M; McConville, S L; Speirs, D C; Ronald, K; Phelps, A D R; Bingham, R; Cross, A W; Robertson, C W; Whyte, C G; He, W; Vorgul, I; Cairns, R A; Kellett, B J

    2014-01-01

    Efficient (∼1%) electron cyclotron radio emissions are known to originate in the X mode from regions of locally depleted plasma in the Earths polar magnetosphere. These emissions are commonly referred to as the Auroral Kilometric Radiation (AKR). AKR occurs naturally in these polar regions where electrons are accelerated by electric fields into the increasing planetary magnetic dipole. Here conservation of the magnetic moment converts axial to rotational momentum forming a horseshoe distribution in velocity phase space. This distribution is unstable to cyclotron emission with radiation emitted in the X-mode. Initial studies were conducted in the form of 2D PiC code simulations [1] and a scaled laboratory experiment that was constructed to reproduce the mechanism of AKR. As studies progressed, 3D PiC code simulations were conducted to enable complete investigation of the complex interaction dimensions. A maximum efficiency of 1.25% is predicted from these simulations in the same mode and frequency as measured in the experiment. This is also consistent with geophysical observations and the predictions of theory.

  10. Python Radiative Transfer Emission code (PyRaTE): non-LTE spectral lines simulations

    Science.gov (United States)

    Tritsis, A.; Yorke, H.; Tassis, K.

    2018-05-01

    We describe PyRaTE, a new, non-local thermodynamic equilibrium (non-LTE) line radiative transfer code developed specifically for post-processing astrochemical simulations. Population densities are estimated using the escape probability method. When computing the escape probability, the optical depth is calculated towards all directions with density, molecular abundance, temperature and velocity variations all taken into account. A very easy-to-use interface, capable of importing data from simulations outputs performed with all major astrophysical codes, is also developed. The code is written in PYTHON using an "embarrassingly parallel" strategy and can handle all geometries and projection angles. We benchmark the code by comparing our results with those from RADEX (van der Tak et al. 2007) and against analytical solutions and present case studies using hydrochemical simulations. The code will be released for public use.

  11. RELAP5/MOD3 assessment for calculation of safety and relief valve discharge piping hydrodynamic loads

    International Nuclear Information System (INIS)

    Stubbe, E.J.; VanHoenacker, L.; Otero, R.

    1994-02-01

    This report presents an assessment study for the use of the code RELAP 5/MOD3/5M5 in the calculation of transient hydrodynamic loads on safety and relief discharge pipes. Its predecessor, RELAP 5/MOD1, was found adequate for this kind of calculations by EPRI. The hydrodynamic loads are very important for the discharge piping design because of the fast opening of the valves and the presence of liquid in the upstream loop seals. The code results are compared to experimental load measurements performed at the Combustion Engineering Laboratory in Windsor (US). Those measurements were part of the PWR Valve Test Program undertaken by EPRI after the TMI-2 accident. This particular kind of transients challenges the applicability of the following code models: two-phase choked discharge; interphase drag in conditions with large density gradients; heat transfer to metallic structures in fast changing conditions; two-phase flow at abrupt expansions. The code applicability to this kind of transients is investigated. Some sensitivity analyses to different code and model options are performed. Finally, the suitability of the code and some modeling guidelines are discussed

  12. A dual-sided coded-aperture radiation detection system

    International Nuclear Information System (INIS)

    Penny, R.D.; Hood, W.E.; Polichar, R.M.; Cardone, F.H.; Chavez, L.G.; Grubbs, S.G.; Huntley, B.P.; Kuharski, R.A.; Shyffer, R.T.; Fabris, L.; Ziock, K.P.; Labov, S.E.; Nelson, K.

    2011-01-01

    We report the development of a large-area, mobile, coded-aperture radiation imaging system for localizing compact radioactive sources in three dimensions while rejecting distributed background. The 3D Stand-Off Radiation Detection System (SORDS-3D) has been tested at speeds up to 95 km/h and has detected and located sources in the millicurie range at distances of over 100 m. Radiation data are imaged to a geospatially mapped world grid with a nominal 1.25- to 2.5-m pixel pitch at distances out to 120 m on either side of the platform. Source elevation is also extracted. Imaged radiation alarms are superimposed on a side-facing video log that can be played back for direct localization of sources in buildings in urban environments. The system utilizes a 37-element array of 5x5x50 cm 3 cesium-iodide (sodium) detectors. Scintillation light is collected by a pair of photomultiplier tubes placed at either end of each detector, with the detectors achieving an energy resolution of 6.15% FWHM (662 keV) and a position resolution along their length of 5 cm FWHM. The imaging system generates a dual-sided two-dimensional image allowing users to efficiently survey a large area. Imaged radiation data and raw spectra are forwarded to the RadioNuclide Analysis Kit (RNAK), developed by our collaborators, for isotope ID. An intuitive real-time display aids users in performing searches. Detector calibration is dynamically maintained by monitoring the potassium-40 peak and digitally adjusting individual detector gains. We have recently realized improvements, both in isotope identification and in distinguishing compact sources from background, through the installation of optimal-filter reconstruction kernels.

  13. GANDALF - Graphical Astrophysics code for N-body Dynamics And Lagrangian Fluids

    Science.gov (United States)

    Hubber, D. A.; Rosotti, G. P.; Booth, R. A.

    2018-01-01

    GANDALF is a new hydrodynamics and N-body dynamics code designed for investigating planet formation, star formation and star cluster problems. GANDALF is written in C++, parallelized with both OPENMP and MPI and contains a PYTHON library for analysis and visualization. The code has been written with a fully object-oriented approach to easily allow user-defined implementations of physics modules or other algorithms. The code currently contains implementations of smoothed particle hydrodynamics, meshless finite-volume and collisional N-body schemes, but can easily be adapted to include additional particle schemes. We present in this paper the details of its implementation, results from the test suite, serial and parallel performance results and discuss the planned future development. The code is freely available as an open source project on the code-hosting website github at https://github.com/gandalfcode/gandalf and is available under the GPLv2 license.

  14. Summary and presentation of the international workshop on beam induced energy deposition (issues, concerns, solutions)

    International Nuclear Information System (INIS)

    Soundranayagam, R.

    1991-11-01

    This report discusses: energy deposition and radiation shielding in antriproton source at FNAL; radiation issues/problems at RHIC; radiation damage to polymers; radiation effects on optical fibre in the SSC tunnel; capabilities of the Brookhaven Radiation Effects Facility; the SSC interaction region; the FLUKA code system, modifications, recent extension and experimental verification; energy particle transport calculations and comparisons with experimental data; Los Alamos High Energy Transport code system; MCNP features and applications; intercomparison of Monte Carlo codes designed for simulation of high energy hadronic cascades; event generator, DTUJET-90 and DTUNUC; Preliminary hydrodynamic calculations of beam energy deposition; MESA code calculations of material response to explosive energy deposition; Smooth particle hydrodynamic; hydrodynamic effects and mass depletion phenomena in targets; beam dump: Beam sweeping and spoilers; Design considerations to mitigate effects of accidental beam dump; SSC beam abort and absorbed; beam abort system of SSC options; unconventional scheme for beam spoilers; low β quadrupoles: Energy deposition and radioactivation; beam induces energy deposition in the SSC components; extension of SSC-SR-1033 approach to radioactivation in LHC and SSC detectors; energy deposition in the SSC low-β IR-quads; beam losses and collimation in the LHC; and radiation shielding around scrapers

  15. FitSKIRT: genetic algorithms to automatically fit dusty galaxies with a Monte Carlo radiative transfer code

    Science.gov (United States)

    De Geyter, G.; Baes, M.; Fritz, J.; Camps, P.

    2013-02-01

    We present FitSKIRT, a method to efficiently fit radiative transfer models to UV/optical images of dusty galaxies. These images have the advantage that they have better spatial resolution compared to FIR/submm data. FitSKIRT uses the GAlib genetic algorithm library to optimize the output of the SKIRT Monte Carlo radiative transfer code. Genetic algorithms prove to be a valuable tool in handling the multi- dimensional search space as well as the noise induced by the random nature of the Monte Carlo radiative transfer code. FitSKIRT is tested on artificial images of a simulated edge-on spiral galaxy, where we gradually increase the number of fitted parameters. We find that we can recover all model parameters, even if all 11 model parameters are left unconstrained. Finally, we apply the FitSKIRT code to a V-band image of the edge-on spiral galaxy NGC 4013. This galaxy has been modeled previously by other authors using different combinations of radiative transfer codes and optimization methods. Given the different models and techniques and the complexity and degeneracies in the parameter space, we find reasonable agreement between the different models. We conclude that the FitSKIRT method allows comparison between different models and geometries in a quantitative manner and minimizes the need of human intervention and biasing. The high level of automation makes it an ideal tool to use on larger sets of observed data.

  16. Development of application program and building database to increase facilities for using the radiation effect assessment computer codes

    International Nuclear Information System (INIS)

    Hyun Seok Ko; Young Min Kim; Suk-Hoon Kim; Dong Hoon Shin; Chang-Sun Kang

    2005-01-01

    The current radiation effect assessment system is required the skillful technique about the application for various code and high level of special knowledge classified by field. Therefore, as a matter of fact, it is very difficult for the radiation users' who don't have enough special knowledge to assess or recognize the radiation effect properly. For this, we already have developed the five Computer codes(windows-based), that is the radiation effect assessment system, in radiation utilizing field including the nuclear power generation. It needs the computer program that non-specialist can use the five computer codes to have already developed with ease. So, we embodied the A.I-based specialist system that can infer the assessment system by itself, according to the characteristic of given problem. The specialist program can guide users, search data, inquire of administrator directly. Conceptually, with circumstance which user to apply the five computer code may encounter actually, we embodied to consider aspects as follows. First, the accessibility of concept and data to need must be improved. Second, the acquirement of reference theory and use of corresponding computer code must be easy. Third, Q and A function needed for solution of user's question out of consideration previously. Finally, the database must be renewed continuously. Actually, to express this necessity, we develop the client program to organize reference data, to build the access methodology(query) about organized data, to load the visible expression function of searched data. And It is embodied the instruction method(effective theory acquirement procedure and methodology) to acquire the theory referring the five computer codes. It is developed the data structure access program(DBMS) to renew continuously data with ease. For Q and A function, it is embodied the Q and A board within client program because the user of client program can search the content of question and answer. (authors)

  17. Simulating Rayleigh-Taylor (RT) instability using PPM hydrodynamics @scale on Roadrunner (u)

    Energy Technology Data Exchange (ETDEWEB)

    Woodward, Paul R [Los Alamos National Laboratory; Dimonte, Guy [Los Alamos National Laboratory; Rockefeller, Gabriel M [Los Alamos National Laboratory; Fryer, Christopher L [Los Alamos National Laboratory; Dimonte, Guy [Los Alamos National Laboratory; Dai, W [Los Alamos National Laboratory; Kares, R. J. [Los Alamos National Laboratory

    2011-01-05

    The effect of initial conditions on the self-similar growth of the RT instability is investigated using a hydrodynamics code based on the piecewise-parabolic-method (PPM). The PPM code was converted to the hybrid architecture of Roadrunner in order to perform the simulations at extremely high speed and spatial resolution. This paper describes the code conversion to the Cell processor, the scaling studies to 12 CU's on Roadrunner and results on the dependence of the RT growth rate on initial conditions. The relevance of the Roadrunner implementation of this PPM code to other existing and anticipated computer architectures is also discussed.

  18. Radiating spheres in general relativity with a mixed transport energy flow

    International Nuclear Information System (INIS)

    Barreto, W.; Nunez, L.A.

    1989-10-01

    A seminumeric method by Herrera, Jimenez and Ruggeri is extended to handle the evolution of general relativistic spheres where diffusion and free streaming radiation processes coexist. It is shown when mixed-mode radiation is present a very different hydrodynamic picture emerges from the models previously considered in both radiation limits. Characteristic times for free streaming, hydrodynamics and diffusion processes are considered comparable. Hydrodynamics and radiation are strongly coupled and the particular equation of state of the model emerges as a very important element in the dynamic of the matter distribution. (author). 16 refs, 5 figs

  19. Computer codes in nuclear safety, radiation transport and dosimetry; Les codes de calcul en radioprotection, radiophysique et dosimetrie

    Energy Technology Data Exchange (ETDEWEB)

    Bordy, J M; Kodeli, I; Menard, St; Bouchet, J L; Renard, F; Martin, E; Blazy, L; Voros, S; Bochud, F; Laedermann, J P; Beaugelin, K; Makovicka, L; Quiot, A; Vermeersch, F; Roche, H; Perrin, M C; Laye, F; Bardies, M; Struelens, L; Vanhavere, F; Gschwind, R; Fernandez, F; Quesne, B; Fritsch, P; Lamart, St; Crovisier, Ph; Leservot, A; Antoni, R; Huet, Ch; Thiam, Ch; Donadille, L; Monfort, M; Diop, Ch; Ricard, M

    2006-07-01

    The purpose of this conference was to describe the present state of computer codes dedicated to radiation transport or radiation source assessment or dosimetry. The presentations have been parted into 2 sessions: 1) methodology and 2) uses in industrial or medical or research domains. It appears that 2 different calculation strategies are prevailing, both are based on preliminary Monte-Carlo calculations with data storage. First, quick simulations made from a database of particle histories built though a previous Monte-Carlo simulation and secondly, a neuronal approach involving a learning platform generated through a previous Monte-Carlo simulation. This document gathers the slides of the presentations.

  20. A multicenter matched case-control analysis on seven polymorphisms from HMGB1 and RAGE genes in predicting hepatocellular carcinoma risk.

    Science.gov (United States)

    Wang, Dan; Qi, Xiaoying; Liu, Fang; Yang, Chuanhua; Jiang, Wenguo; Wei, Xiaodan; Li, Xuri; Mi, Jia; Tian, Geng

    2017-07-25

    Based on 540 hepatocellular carcinoma patients and 540 age- and gender-matched controls, we tested the hypothesis that high mobility group protein box1 (HMGB1) and the receptor for advanced glycation end products (RAGE) genes are two potential candidate susceptibility genes for hepatocellular carcinoma in a multicenter hospital-based case-control analysis. The genotypes of seven widely-studied polymorphisms were determined, and their distributions respected the Hardy-Weinberg equilibrium. The mutant alleles of two polymorphisms, rs1045411 in HMGB1 gene and rs2070600 in RAGE gene, had significantly higher frequencies in patients than in controls (P hepatocellular carcinoma significantly, particularly for rs2070600 under the additive (odds ratio [OR] = 1.77; 95% confidence interval [CI]: 1.34-2.32; P hepatocellular carcinoma compared with the commonest C-C-T haplotype after adjustment. In RAGE gene, the T-T-A-G (rs1800625-rs1800624-rs2070600-rs184003) (adjusted OR; 95% CI; P: 1.75; 1.02-3.03; 0.045) and T-T-A-T (adjusted OR; 95% CI; P: 1.95; 1.01-3.76; 0.048) haplotypes were associated with a marginally increased risk of hepatocellular carcinoma compared with the commonest T-T-G-G haplotype. In summary, we identified two risk-associated polymorphisms (rs1045411 and rs2070600), and more importantly a joint impact of seven polymorphisms from the HMGB1/RAGE axis in susceptibility to hepatocellular carcinoma.

  1. Radiation hydrodynamics of z-pinch plasmas

    International Nuclear Information System (INIS)

    Davis, J.

    1993-01-01

    Over the years there has been a sustained interest in and fascination with Z-pinch plasmas. Whether the interest is in radiation source development, fusion plasmas, or basic research there exits an extensive bibliography of literature promulgating and perpetuating a variety of claims regarding the performance of Z-pinch plasmas. In this paper an attempt will be made to present a coherent picture of the documented and commonly held views for a class of Z-pinch plasmas concerned primarily with soft x-ray radiation source development. Many of the issues and findings are common to Z-pinch plasmas in general but the attention here will be focused on gas puffs and multiple wire arrays. The role and importance of radiation on the dynamics and the interplay between the radiation and the dynamics will also be presented and discussed. A number of comparisons with experimental results will be made with 0-, 1-, and 2-D numerical simulations for several pulsed power drivers ranging in current from several mega-amps to 10's of mega-amps for a variety of risetimes and load materials

  2. GAIA: A 2-D Curvilinear moving grid hydrodynamic code

    International Nuclear Information System (INIS)

    Jourdren, H.

    1987-02-01

    The GAIA computer code is developed for time dependent, compressible, multimaterial fluid flow problems, to overcome some drawbacks of traditional 2-D Lagrangian codes. The initial goals of robustness, entropy accuracies, efficiency in presence of large interfacial slip, have already been achieved. The general GODUNOV approach is applied to an arbitrary time varying control-volume formulation. We review in this paper the Riemann solver, the GODUNOV cartesian and curvilinear moving grid schemes and an efficient grid generation algorithm. We finally outline a possible second order accuracy extension

  3. Book review: The Wilderness Debate Rages On: Continuing the Great New Wilderness Debate

    Science.gov (United States)

    Peter Landres

    2009-01-01

    The Wilderness Debate Rages On is a collection of mostly previously published papers about the meaning, value, and role of wilderness and continues the discussion that was propelled by the editors' previous book The Great New Wilderness Debate (also a collection of papers) published in 1998. The editors state that this sequel to their previous book is mandated...

  4. Performance of the dot product function in radiative transfer code SORD

    Science.gov (United States)

    Korkin, Sergey; Lyapustin, Alexei; Sinyuk, Aliaksandr; Holben, Brent

    2016-10-01

    The successive orders of scattering radiative transfer (RT) codes frequently call the scalar (dot) product function. In this paper, we study performance of some implementations of the dot product in the RT code SORD using 50 scenarios for light scattering in the atmosphere-surface system. In the dot product function, we use the unrolled loops technique with different unrolling factor. We also considered the intrinsic Fortran functions. We show results for two machines: ifort compiler under Windows, and pgf90 under Linux. Intrinsic DOT_PRODUCT function showed best performance for the ifort. For the pgf90, the dot product implemented with unrolling factor 4 was the fastest. The RT code SORD together with the interface that runs all the mentioned tests are publicly available from ftp://maiac.gsfc.nasa.gov/pub/skorkin/SORD_IP_16B (current release) or by email request from the corresponding (first) author.

  5. Evaluation of coded aperture radiation detectors using a Bayesian approach

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Kyle, E-mail: mille856@andrew.cmu.edu [Auton Lab, The Robotics Institute, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213 (United States); Huggins, Peter [Auton Lab, The Robotics Institute, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213 (United States); Labov, Simon; Nelson, Karl [Lawrence Livermore National Laboratory, Livermore, CA (United States); Dubrawski, Artur [Auton Lab, The Robotics Institute, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213 (United States)

    2016-12-11

    We investigate tradeoffs arising from the use of coded aperture gamma-ray spectrometry to detect and localize sources of harmful radiation in the presence of noisy background. Using an example application scenario of area monitoring and search, we empirically evaluate weakly supervised spectral, spatial, and hybrid spatio-spectral algorithms for scoring individual observations, and two alternative methods of fusing evidence obtained from multiple observations. Results of our experiments confirm the intuition that directional information provided by spectrometers masked with coded aperture enables gains in source localization accuracy, but at the expense of reduced probability of detection. Losses in detection performance can however be to a substantial extent reclaimed by using our new spatial and spatio-spectral scoring methods which rely on realistic assumptions regarding masking and its impact on measured photon distributions.

  6. Review of the Monte Carlo and deterministic codes in radiation protection and dosimetry

    International Nuclear Information System (INIS)

    Tagziria, H.

    2000-02-01

    Modelling a physical system can be carried out either stochastically or deterministically. An example of the former method is the Monte Carlo technique, in which statistically approximate methods are applied to exact models. No transport equation is solved as individual particles are simulated and some specific aspect (tally) of their average behaviour is recorded. The average behaviour of the physical system is then inferred using the central limit theorem. In contrast, deterministic codes use mathematically exact methods that are applied to approximate models to solve the transport equation for the average particle behaviour. The physical system is subdivided in boxes in the phase-space system and particles are followed from one box to the next. The smaller the boxes the better the approximations become. Although the Monte Carlo method has been used for centuries, its more recent manifestation has really emerged from the Manhattan project of the Word War II. Its invention is thought to be mainly due to Metropolis, Ulah (through his interest in poker), Fermi, von Neuman and Richtmeyer. Over the last 20 years or so, the Monte Carlo technique has become a powerful tool in radiation transport. This is due to users taking full advantage of richer cross section data, more powerful computers and Monte Carlo techniques for radiation transport, with high quality physics and better known source spectra. This method is a common sense approach to radiation transport and its success and popularity is quite often also due to necessity, because measurements are not always possible or affordable. In the Monte Carlo method, which is inherently realistic because nature is statistical, a more detailed physics is made possible by isolation of events while rather elaborate geometries can be modelled. Provided that the physics is correct, a simulation is exactly analogous to an experimenter counting particles. In contrast to the deterministic approach, however, a disadvantage of the

  7. SIMULATIONS OF HIGH-VELOCITY CLOUDS. I. HYDRODYNAMICS AND HIGH-VELOCITY HIGH IONS

    International Nuclear Information System (INIS)

    Kwak, Kyujin; Henley, David B.; Shelton, Robin L.

    2011-01-01

    We present hydrodynamic simulations of high-velocity clouds (HVCs) traveling through the hot, tenuous medium in the Galactic halo. A suite of models was created using the FLASH hydrodynamics code, sampling various cloud sizes, densities, and velocities. In all cases, the cloud-halo interaction ablates material from the clouds. The ablated material falls behind the clouds where it mixes with the ambient medium to produce intermediate-temperature gas, some of which radiatively cools to less than 10,000 K. Using a non-equilibrium ionization algorithm, we track the ionization levels of carbon, nitrogen, and oxygen in the gas throughout the simulation period. We present observation-related predictions, including the expected H I and high ion (C IV, N V, and O VI) column densities on sightlines through the clouds as functions of evolutionary time and off-center distance. The predicted column densities overlap those observed for Complex C. The observations are best matched by clouds that have interacted with the Galactic environment for tens to hundreds of megayears. Given the large distances across which the clouds would travel during such time, our results are consistent with Complex C having an extragalactic origin. The destruction of HVCs is also of interest; the smallest cloud (initial mass ∼ 120 M sun ) lost most of its mass during the simulation period (60 Myr), while the largest cloud (initial mass ∼ 4 x 10 5 M sun ) remained largely intact, although deformed, during its simulation period (240 Myr).

  8. Theory and application of a three-dimensional code SHAPS to complex piping systems

    International Nuclear Information System (INIS)

    Wang, C.Y.

    1983-01-01

    This paper describes the theory and application of a three-dimensional computer code SHAPS to the complex piping systems. The code utilizes a two-dimensional implicit Eulerian method for the hydrodynamic analysis together with a three-dimensional elastic-plastic finite-element program for the structural calculation. A three-dimensional pipe element with eight degrees of freedom is employed to account for the hoop, flexural, axial, and the torsional mode of the piping system. In the SHAPS analysis the hydrodynamic equations are modified to include the global piping motion. Coupling between fluid and structure is achieved by enforcing the free-slip boundary conditions. Also, the response of the piping network generated by the seismic excitation can be included. A thermal transient capability is also provided in SHAPS. To illustrate the methodology, many sample problems dealing with the hydrodynamic, structural, and thermal analyses of reactor-piping systems are given. Validation of the SHAPS code with experimental data is also presented

  9. Optimization of a Two-Fluid Hydrodynamic Model of Churn-Turbulent Flow

    Energy Technology Data Exchange (ETDEWEB)

    Donna Post Guillen

    2009-07-01

    A hydrodynamic model of two-phase, churn-turbulent flows is being developed using the computational multiphase fluid dynamics (CMFD) code, NPHASE-CMFD. The numerical solutions obtained by this model are compared with experimental data obtained at the TOPFLOW facility of the Institute of Safety Research at the Forschungszentrum Dresden-Rossendorf. The TOPFLOW data is a high quality experimental database of upward, co-current air-water flows in a vertical pipe suitable for validation of computational fluid dynamics (CFD) codes. A five-field CMFD model was developed for the continuous liquid phase and four bubble size groups using mechanistic closure models for the ensemble-averaged Navier-Stokes equations. Mechanistic models for the drag and non-drag interfacial forces are implemented to include the governing physics to describe the hydrodynamic forces controlling the gas distribution. The closure models provide the functional form of the interfacial forces, with user defined coefficients to adjust the force magnitude. An optimization strategy was devised for these coefficients using commercial design optimization software. This paper demonstrates an approach to optimizing CMFD model parameters using a design optimization approach. Computed radial void fraction profiles predicted by the NPHASE-CMFD code are compared to experimental data for four bubble size groups.

  10. Calculation of the Thermal Radiation Benchmark Problems for a CANDU Fuel Channel Analysis Using the CFX-10 Code

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Hyoung Tae; Park, Joo Hwan; Rhee, Bo Wook

    2006-07-15

    To justify the use of a commercial Computational Fluid Dynamics (CFD) code for a CANDU fuel channel analysis, especially for the radiation heat transfer dominant conditions, the CFX-10 code is tested against three benchmark problems which were used for the validation of a radiation heat transfer in the CANDU analysis code, a CATHENA. These three benchmark problems are representative of the CANDU fuel channel configurations from a simple geometry to whole fuel channel geometry. With assumptions of a non-participating medium completely enclosed with the diffuse, gray and opaque surfaces, the solutions of the benchmark problems are obtained by the concept of surface resistance to radiation accounting for the view factors and the emissivities. The view factors are calculated by the program MATRIX version 1.0 avoiding the difficulty of hand calculation for the complex geometries. For the solutions of the benchmark problems, the temperature or the net radiation heat flux boundary conditions are prescribed for each radiating surface to determine the radiation heat transfer rate or the surface temperature, respectively by using the network method. The Discrete Transfer Model (DTM) is used for the CFX-10 radiation model and its calculation results are compared with the solutions of the benchmark problems. The CFX-10 results for the three benchmark problems are in close agreement with these solutions, so it is concluded that the CFX-10 with a DTM radiation model can be applied to the CANDU fuel channel analysis where a surface radiation heat transfer is a dominant mode of the heat transfer.

  11. Calculation of the Thermal Radiation Benchmark Problems for a CANDU Fuel Channel Analysis Using the CFX-10 Code

    International Nuclear Information System (INIS)

    Kim, Hyoung Tae; Park, Joo Hwan; Rhee, Bo Wook

    2006-07-01

    To justify the use of a commercial Computational Fluid Dynamics (CFD) code for a CANDU fuel channel analysis, especially for the radiation heat transfer dominant conditions, the CFX-10 code is tested against three benchmark problems which were used for the validation of a radiation heat transfer in the CANDU analysis code, a CATHENA. These three benchmark problems are representative of the CANDU fuel channel configurations from a simple geometry to whole fuel channel geometry. With assumptions of a non-participating medium completely enclosed with the diffuse, gray and opaque surfaces, the solutions of the benchmark problems are obtained by the concept of surface resistance to radiation accounting for the view factors and the emissivities. The view factors are calculated by the program MATRIX version 1.0 avoiding the difficulty of hand calculation for the complex geometries. For the solutions of the benchmark problems, the temperature or the net radiation heat flux boundary conditions are prescribed for each radiating surface to determine the radiation heat transfer rate or the surface temperature, respectively by using the network method. The Discrete Transfer Model (DTM) is used for the CFX-10 radiation model and its calculation results are compared with the solutions of the benchmark problems. The CFX-10 results for the three benchmark problems are in close agreement with these solutions, so it is concluded that the CFX-10 with a DTM radiation model can be applied to the CANDU fuel channel analysis where a surface radiation heat transfer is a dominant mode of the heat transfer

  12. Relativistic low angular momentum accretion: long time evolution of hydrodynamical inviscid flows

    Science.gov (United States)

    Mach, Patryk; Piróg, Michał; Font, José A.

    2018-05-01

    We investigate relativistic low angular momentum accretion of inviscid perfect fluid onto a Schwarzschild black hole. The simulations are performed with a general-relativistic, high-resolution (second-order), shock-capturing, hydrodynamical numerical code. We use horizon-penetrating Eddington–Finkelstein coordinates to remove inaccuracies in regions of strong gravity near the black hole horizon and show the expected convergence of the code with the Michel solution and stationary Fishbone–Moncrief toroids. We recover, in the framework of relativistic hydrodynamics, the qualitative behavior known from previous Newtonian studies that used a Bondi background flow in a pseudo-relativistic gravitational potential with a latitude-dependent angular momentum at the outer boundary. Our models exhibit characteristic ‘turbulent’ behavior and the attained accretion rates are lower than those of the Bondi–Michel radial flow. For sufficiently low values of the asymptotic sound speed, geometrically thick tori form in the equatorial plane surrounding the black hole horizon while accretion takes place mainly through the poles.

  13. Multidimensional, multiphysics simulations of core-collapse supernovae

    Energy Technology Data Exchange (ETDEWEB)

    Messer, O E B [National Center for Computational Sciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6008 (United States); Bruenn, S W [Department of Physics, Florida Atlantic University, Boca Raton, FL 33431-0991 (United States); Blondin, J M [Department of Physics, North Carolina State University, Raleigh, NC 27695-8202 (United States); Hix, W R; Mezzacappa, A [Physics Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6354 (United States)

    2008-07-15

    CHIMERA is a multi-dimensional radiation hydrodynamics code designed to study core-collapse supernovae. The code is made up of three essentially independent parts: a hydrodynamics module, a nuclear burning module, and a neutrino transport solver combined within an operator-split approach. We review the code's architecture and some recently improved implementations used in the code. We also briefly discuss preliminary results obtained with the code in three spatial dimensions.

  14. Radiation-mediated Shocks in Gamma-Ray Bursts: Pair Creation

    Science.gov (United States)

    Lundman, Christoffer; Beloborodov, Andrei M.; Vurm, Indrek

    2018-05-01

    Relativistic sub-photospheric shocks are a possible mechanism for producing prompt gamma-ray burst (GRB) emission. Such shocks are mediated by scattering of radiation. We introduce a time-dependent, special relativistic code which dynamically couples Monte Carlo radiative transfer to the flow hydrodynamics. The code also self-consistently follows electron–positron pair production in photon–photon collisions. We use the code to simulate shocks with properties relevant to GRBs. We focus on plane-parallel solutions, which are accurate deep below the photosphere. The shock generates a power-law photon spectrum through the first-order Fermi mechanism, extending upward from the typical upstream photon energy. Strong (high Mach number) shocks produce rising νF ν spectra. We observe that in non-relativistic shocks the spectrum extends to {E}\\max ∼ {m}e{v}2, where v is the speed difference between the upstream and downstream. In relativistic shocks the spectrum extends to energies E> 0.1 {m}e{c}2 where its slope softens due to Klein–Nishina effects. Shocks with Lorentz factors γ > 1.5 are prolific producers of electron–positron pairs, yielding hundreds of pairs per proton. The main effect of pairs is to reduce the shock width by a factor of ∼ {Z}+/- -1. Most pairs annihilate far downstream of the shock, and the radiation spectrum relaxes to a Wien distribution, reaching equilibrium with the plasma at a temperature determined by the shock jump conditions and the photon number per proton. We discuss the implications of our results for observations of radiation generated by sub-photospheric shocks.

  15. Numerical analysis of the effects of radiation heat transfer and ionization energy loss on the cavitation Bubble's dynamics

    Science.gov (United States)

    Mahdi, M.; Ebrahimi, R.; Shams, M.

    2011-06-01

    A numerical scheme for simulating the acoustic and hydrodynamic cavitation was developed. Bubble instantaneous radius was obtained using Gilmore equation which considered the compressibility of the liquid. A uniform temperature was assumed for the inside gas during the collapse. Radiation heat transfer inside the bubble and the heat conduction to the bubble was considered. The numerical code was validated with the experimental data and a good correspondence was observed. The dynamics of hydrofoil cavitation bubble were also investigated. It was concluded that the thermal radiation heat transfer rate strongly depended on the cavitation number, initial bubble radius and hydrofoil angle of attack.

  16. The Premar Code for the Monte Carlo Simulation of Radiation Transport In the Atmosphere

    International Nuclear Information System (INIS)

    Cupini, E.; Borgia, M.G.; Premuda, M.

    1997-03-01

    The Montecarlo code PREMAR is described, which allows the user to simulate the radiation transport in the atmosphere, in the ultraviolet-infrared frequency interval. A plan multilayer geometry is at present foreseen by the code, witch albedo possibility at the lower boundary surface. For a given monochromatic point source, the main quantities computed by the code are the absorption spatial distributions of aerosol and molecules, together with the related atmospheric transmittances. Moreover, simulation of of Lidar experiments are foreseen by the code, the source and telescope fields of view being assigned. To build-up the appropriate probability distributions, an input data library is assumed to be read by the code. For this purpose the radiance-transmittance LOWTRAN-7 code has been conveniently adapted as a source of the library so as to exploit the richness of information of the code for a large variety of atmospheric simulations. Results of applications of the PREMAR code are finally presented, with special reference to simulations of Lidar system and radiometer experiments carried out at the Brasimone ENEA Centre by the Environment Department

  17. Thalamus segmentation from MP2RAGE: a comparative study

    DEFF Research Database (Denmark)

    Eskildsen, Simon Fristed; Næss-Schmidt, Erhard; Blicher, Jakob

    RAGE sequence on a Siemens Magnetom Skyra 3T MRI system with a 32 channel head coil. Parameters were TR=5 s, TI1=0.7 s, TI2=2.5 s, α1=4°, α2=5° and acquired at a nominal, isotropic, resolution of 1mm (acquisition matrix: 240x256, 176 sagittal slices). An experienced neuro-radiologist manually traced......, increasing the number of training images in the library of SNIPE improves segmentation accuracy (Figure 4). Even though the DSI seems to plateau around a library size of 10-11 images, increasing the library may improve the accuracy even further. Conclusions: Widely used atlas based segmentation methods...

  18. The new deterministic 3-D radiation transport code Multitrans: C5G7 MOX fuel assembly benchmark

    International Nuclear Information System (INIS)

    Kotiluoto, P.

    2003-01-01

    The novel deterministic three-dimensional radiation transport code MultiTrans is based on combination of the advanced tree multigrid technique and the simplified P3 (SP3) radiation transport approximation. In the tree multigrid technique, an automatic mesh refinement is performed on material surfaces. The tree multigrid is generated directly from stereo-lithography (STL) files exported by computer-aided design (CAD) systems, thus allowing an easy interface for construction and upgrading of the geometry. The deterministic MultiTrans code allows fast solution of complicated three-dimensional transport problems in detail, offering a new tool for nuclear applications in reactor physics. In order to determine the feasibility of a new code, computational benchmarks need to be carried out. In this work, MultiTrans code is tested for a seven-group three-dimensional MOX fuel assembly transport benchmark without spatial homogenization (NEA C5G7 MOX). (author)

  19. Effect of flow rate distribution at the inlet on hydrodynamic mixing in narrow rectangular multi-channel

    International Nuclear Information System (INIS)

    Xu Jianjun; Chen Bingde; Wang Xiaojun

    2008-01-01

    Flow and heat transfer in the narrow rectangular multi-channel is widely en- countered in the engineering application, hydrodynamic mixing in the narrow rectangular multi-channel is one of the important concerns. With the help of the Computational Fluid Dynamics code CFX, the effect of flow rate distribution of the main channel at the inlet on hydrodynamic mixing in the narrow rectangular multi-channel is numerical simulated. The results show that the flow rate distributions at the inlet have a great effect on hydrodynamics mixing in multi-channel, the flow rate in the main channel doesn't change with increasing the axial mixing section when the average flow rate at the inlet is set. Hydrodynamic mixing will arise in the mixing section when the different ratio of the flow rate distribution at the inlet is set, and hydrodynamic mixing increases with the difference of the flow rate distribution at the inlet increase. The trend of the flow rate distribution of the main channel is consistent during the whole axial mixing section, and hydrodynamic mixing in former 4 mixing section is obvious. (authors)

  20. RADHEAT-V4: a code system to generate multigroup constants and analyze radiation transport for shielding safety evaluation

    International Nuclear Information System (INIS)

    Yamano, Naoki; Minami, Kazuyoshi; Koyama, Kinji; Naito, Yoshitaka.

    1989-03-01

    A modular code system RADHEAT-V4 has been developed for performing precisely neutron and photon transport analyses, and shielding safety evaluations. The system consists of the functional modules for producing coupled multi-group neutron and photon cross section sets, for analyzing the neutron and photon transport, and for calculating the atom displacement and the energy deposition due to radiations in nuclear reactor or shielding material. A precise method named Direct Angular Representation (DAR) has been developed for eliminating an error associated with the method of the finite Legendre expansion in evaluating angular distributions of cross sections and radiation fluxes. The DAR method implemented in the code system has been described in detail. To evaluate the accuracy and applicability of the code system, some test calculations on strong anisotropy problems have been performed. From the results, it has been concluded that RADHEAT-V4 is successfully applicable to evaluating shielding problems accurately for fission and fusion reactors and radiation sources. The method employed in the code system is very effective in eliminating negative values and oscillations of angular fluxes in a medium having an anisotropic source or strong streaming. Definitions of the input data required in various options of the code system and the sample problems are also presented. (author)

  1. DGR, GGR; molecular dynamical codes for simulating radiation damages in diamond and graphite crystals

    International Nuclear Information System (INIS)

    Taji, Yukichi

    1984-06-01

    Development has been made of molecular dynamical codes DGR and GGR to simulate radiation damages yielded in the diamond and graphite structure crystals, respectively. Though the usual molecular dynamical codes deal only with the central forces as the mutual interactions between atoms, the present codes can take account of noncentral forces to represent the effect of the covalent bonds characteristic of diamond or graphite crystals. It is shown that lattice defects yielded in these crystals are stable by themselves in the present method without any supports of virtual surface forces set on the crystallite surfaces. By this effect the behavior of lattice defects has become possible to be simulated in a more realistic manner. Some examples of the simulation with these codes are shown. (author)

  2. Development of the computer code to monitor gamma radiation in the nuclear facility environment

    International Nuclear Information System (INIS)

    Akhmad, Y. R.; Pudjiyanto, M.S.

    1998-01-01

    Computer codes for gamma radiation monitoring in the vicinity of nuclear facility which have been developed could be introduced to the commercial potable gamma analyzer. The crucial stage of the first year activity was succeeded ; that is the codes have been tested to transfer data file (pulse high distribution) from Micro NOMAD gamma spectrometer (ORTEC product) and the convert them into dosimetry and physics quantities. Those computer codes are called as GABATAN (Gamma Analyzer of Batan) and NAGABAT (Natural Gamma Analyzer of Batan). GABATAN code can isable to used at various nuclear facilities for analyzing gamma field up to 9 MeV, while NAGABAT could be used for analyzing the contribution of natural gamma rays to the exposure rate in the certain location

  3. Elasto-hydrodynamic lubrication

    CERN Document Server

    Dowson, D; Hopkins, D W

    1977-01-01

    Elasto-Hydrodynamic Lubrication deals with the mechanism of elasto-hydrodynamic lubrication, that is, the lubrication regime in operation over the small areas where machine components are in nominal point or line contact. The lubrication of rigid contacts is discussed, along with the effects of high pressure on the lubricant and bounding solids. The governing equations for the solution of elasto-hydrodynamic problems are presented.Comprised of 13 chapters, this volume begins with an overview of elasto-hydrodynamic lubrication and representation of contacts by cylinders, followed by a discussio

  4. Elementary classical hydrodynamics

    CERN Document Server

    Chirgwin, B H; Langford, W J; Maxwell, E A; Plumpton, C

    1967-01-01

    Elementary Classical Hydrodynamics deals with the fundamental principles of elementary classical hydrodynamics, with emphasis on the mechanics of inviscid fluids. Topics covered by this book include direct use of the equations of hydrodynamics, potential flows, two-dimensional fluid motion, waves in liquids, and compressible flows. Some general theorems such as Bernoulli's equation are also considered. This book is comprised of six chapters and begins by introducing the reader to the fundamental principles of fluid hydrodynamics, with emphasis on ways of studying the motion of a fluid. Basic c

  5. Recent development of three-dimensional piping code SHAPS

    International Nuclear Information System (INIS)

    Wang, C.Y.; Zeuch, W.R.

    1985-01-01

    This paper describes the recent development of the three-dimensional, structural, and hydrodynamic analysis piping code SHAPS. Several new features have been incorporated into the program, including (1) an elbow hydrodynamic model for analyzing the effect of global motion on the pressure-wave propagation, (2) a component hydrodynamic model for treating fluid motion in the vicinity of rigid obstacles and baffle plates, (3) the addition of the implicit time integration scheme in the structural-dynamic analysis, (4) the option of an implicit-implicit fluid-structural linking scheme, and (5) provisions for two constitutive equations for materials under various loading conditions. Sample problems are given to illustrate these features. Their results are discussed in detail. 7 refs., 8 figs

  6. Radiation protection in dentistry. Recommended safety procedures for the use of dental x-ray equipment. Safety code 30

    International Nuclear Information System (INIS)

    1994-01-01

    The Radiation Protection Bureau has prepared a series of documents on safety codes to set out requirements for the safe use of radiation-emitting equipment. This Safety Code has been prepared to provide specific guidance to the dentist, dental hygienist, dental assistant and other support personnel concerned with safety procedures and equipment performance. Dental radiography is one of the most valuable tools used in modern dental health care. It makes possible the diagnosis of physical conditions that would otherwise be difficult to identify. The use of dental radiological procedures must be carefully managed, because x-radiation has the potential for damaging healthy cells and tissues. Although no known occurrence of cancer or genetic damage has been observed from radiation doses delivered in modern dentistry, and until more evidence is available, one should practice radiation hygiene with the same care as would be dictated if a hazard were known to exist. The aim of radiation protection in dentistry is to obtain the desired clinical information with minimal radiation exposure to patients, dental personnel and the public. 15 tabs

  7. Radiation protection in dentistry. Recommended safety procedures for the use of dental x-ray equipment. Safety code 30

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1994-12-31

    The Radiation Protection Bureau has prepared a series of documents on safety codes to set out requirements for the safe use of radiation-emitting equipment. This Safety Code has been prepared to provide specific guidance to the dentist, dental hygienist, dental assistant and other support personnel concerned with safety procedures and equipment performance. Dental radiography is one of the most valuable tools used in modern dental health care. It makes possible the diagnosis of physical conditions that would otherwise be difficult to identify. The use of dental radiological procedures must be carefully managed, because x-radiation has the potential for damaging healthy cells and tissues. Although no known occurrence of cancer or genetic damage has been observed from radiation doses delivered in modern dentistry, and until more evidence is available, one should practice radiation hygiene with the same care as would be dictated if a hazard were known to exist. The aim of radiation protection in dentistry is to obtain the desired clinical information with minimal radiation exposure to patients, dental personnel and the public. 15 tabs.

  8. Application of the High Gradient hydrodynamics code to simulations of a two-dimensional zero-pressure-gradient turbulent boundary layer over a flat plate

    Science.gov (United States)

    Kaiser, Bryan E.; Poroseva, Svetlana V.; Canfield, Jesse M.; Sauer, Jeremy A.; Linn, Rodman R.

    2013-11-01

    The High Gradient hydrodynamics (HIGRAD) code is an atmospheric computational fluid dynamics code created by Los Alamos National Laboratory to accurately represent flows characterized by sharp gradients in velocity, concentration, and temperature. HIGRAD uses a fully compressible finite-volume formulation for explicit Large Eddy Simulation (LES) and features an advection scheme that is second-order accurate in time and space. In the current study, boundary conditions implemented in HIGRAD are varied to find those that better reproduce the reduced physics of a flat plate boundary layer to compare with complex physics of the atmospheric boundary layer. Numerical predictions are compared with available DNS, experimental, and LES data obtained by other researchers. High-order turbulence statistics are collected. The Reynolds number based on the free-stream velocity and the momentum thickness is 120 at the inflow and the Mach number for the flow is 0.2. Results are compared at Reynolds numbers of 670 and 1410. A part of the material is based upon work supported by NASA under award NNX12AJ61A and by the Junior Faculty UNM-LANL Collaborative Research Grant.

  9. Hydrodynamic Instability, Integrated Code, Laboratory Astrophysics, and Astrophysics

    Science.gov (United States)

    Takabe, Hideaki

    2016-10-01

    This is an article for the memorial lecture of Edward Teller Medal and is presented as memorial lecture at the IFSA03 conference held on September 12th, 2003, at Monterey, CA. The author focuses on his main contributions to fusion science and its extension to astrophysics in the field of theory and computation by picking up five topics. The first one is the anomalous resisitivity to hot electrons penetrating over-dense region through the ion wave turbulence driven by the return current compensating the current flow by the hot electrons. It is concluded that almost the same value of potential as the average kinetic energy of the hot electrons is realized to prevent the penetration of the hot electrons. The second is the ablative stabilization of Rayleigh-Taylor instability at ablation front and its dispersion relation so-called Takabe formula. This formula gave a principal guideline for stable target design. The author has developed an integrated code ILESTA (ID & 2D) for analyses and design of laser produced plasma including implosion dynamics. It is also applied to design high gain targets. The third is the development of the integrated code ILESTA. The forth is on Laboratory Astrophysics with intense lasers. This consists of two parts; one is review on its historical background and the other is on how we relate laser plasma to wide-ranging astrophysics and the purposes for promoting such research. In relation to one purpose, I gave a comment on anomalous transport of relativistic electrons in Fast Ignition laser fusion scheme. Finally, I briefly summarize recent activity in relation to application of the author's experience to the development of an integrated code for studying extreme phenomena in astrophysics.

  10. Benchmark test of drift-kinetic and gyrokinetic codes through neoclassical transport simulations

    International Nuclear Information System (INIS)

    Satake, S.; Sugama, H.; Watanabe, T.-H.; Idomura, Yasuhiro

    2009-09-01

    Two simulation codes that solve the drift-kinetic or gyrokinetic equation in toroidal plasmas are benchmarked by comparing the simulation results of neoclassical transport. The two codes are the drift-kinetic δf Monte Carlo code (FORTEC-3D) and the gyrokinetic full- f Vlasov code (GT5D), both of which solve radially-global, five-dimensional kinetic equation with including the linear Fokker-Planck collision operator. In a tokamak configuration, neoclassical radial heat flux and the force balance relation, which relates the parallel mean flow with radial electric field and temperature gradient, are compared between these two codes, and their results are also compared with the local neoclassical transport theory. It is found that the simulation results of the two codes coincide very well in a wide rage of plasma collisionality parameter ν * = 0.01 - 10 and also agree with the theoretical estimations. The time evolution of radial electric field and particle flux, and the radial profile of the geodesic acoustic mode frequency also coincide very well. These facts guarantee the capability of GT5D to simulate plasma turbulence transport with including proper neoclassical effects of collisional diffusion and equilibrium radial electric field. (author)

  11. Hydrodynamic modeling and explosive compaction of ceramics

    International Nuclear Information System (INIS)

    Hoenig, C.; Holt, A.; Finger, M.; Kuhl, W.

    1977-01-01

    High-density ceramics with high-strength microstructure were achieved by explosive compaction. Well-characterized Al 2 O 3 , AlN, and boron powders were explosively compacted in both cylindrical and flat plate geometries. In cylindrical geometries compacted densities between 91 and 98 percent of theoretical were achieved. Microhardness measurements indicated that the strength and integrity of the microstructure were comparable to conventionally fabricated ceramics, even though all samples with densities greater than 90 percent theoretical contained macrocracks. Fractured surfaces evaluated by SEM showed evidence of boundary melting. Equation of state data for porous Al 2 O 3 were used to calculate the irreversible work done on the sample as a function of pressure. This was expressed as a percentage of the total sample which could be melted. Calculations show that very little melting can be expected in samples shocked to less than 3 GPa. Significant melting and grain boundary fusion can be expected in samples shocked to pressures greater than 8 GPa. Hydrodynamic modeling of right cylinder compaction with detonation at one end was attempted by using a two-dimensional computer code. The complications of this analysis led to experiments using plane shock waves. Flat-plate compaction assemblies were designed and analyzed by 2-D hydrodynamic codes. The use of porous shock attenuators was evaluated. Experiments were performed on aluminum oxide powders in plane wave geometry. Microstructure evaluations were made as a function of location in the flat plate samples. 11 figures, 1 table

  12. Gadolinium-Enhanced Three-Dimensional Magnetization - Prepared Rapid Gradient-Echo (3D MP-RAGE) Imaging is Superior to Spin-Echo Imaging in Delineating Brain Metastases

    International Nuclear Information System (INIS)

    Takeda, T.; Takeda, A.; Nagaoka, T.; Kunieda, E.; Takemasa, K.; Watanabe, M.; Hatou, T.; Oguro, S.; Katayama, M.

    2008-01-01

    Background: Precisely defining the number and location of brain metastases is very important for establishing a treatment strategy for malignancies. Although magnetic resonance imaging (MRI) is now considered the best modality, various improvements in sequences are still being made. Purpose: To prospectively compare the diagnostic ability of three-dimensional, magnetization-prepared rapid gradient-echo (3D MP-RAGE) imaging in detecting metastatic brain tumors, with that of two-dimensional spin-echo (2D SE) T1-weighted imaging. Material and Methods: A total of 123 examinations were included in this study, and 119 examinations from 88 patients with known malignancies were analyzed. All patients underwent T1- and T2-weighted 2D SE transverse imaging, followed by gadolinium-enhanced T1-weighted transverse and coronal 2D SE imaging and 3D MP-RAGE transverse imaging. Four radiologists interpreted the images to compare the accuracy and the time required for interpretation for each imaging. Results: 3D MP-RAGE imaging was significantly better than 2D SE imaging for detecting metastatic brain lesions, regardless of the readers' experience. The sensitivities of the 3D MP-RAGE and 2D SE imaging for all observers were 0.81 vs. 0.80 (P>0.05), specificities were 0.93 vs. 0.87 (P 0.05), and accuracies were 0.84 vs. 0.78 (P<0.05), respectively. There was no significant difference in the time required for image interpretation between the two modalities (15.6±4.0 vs. 15.4±4.1 min). Conclusion: 3D MP-RAGE imaging proved superior to 2D SE imaging in the detection of brain metastases

  13. The application of the Monte Carlo code FLUKA in radiation protection studies for the large hadron collider

    International Nuclear Information System (INIS)

    Battistoni, Giuseppe; Broggi, Francesco; Brugger, Markus

    2010-01-01

    The multi-purpose particle interaction and transport code FLUKA is integral part of all radiation protection studies for the design and operation of the Large Hadron Collider (LHC) at CERN. It is one of the very few codes available for this type of calculations which is capable to calculate in one and the same simulation proton-proton and heavy ion collisions at LHC energies as well as the entire hadronic and electromagnetic particle cascade initiated by secondary particles in detectors and beam-line components from TeV energies down to energies of thermal neutrons. The present paper reviews these capabilities of FLUKA in giving details of relevant physics models along with examples of radiation protection studies for the LHC such as shielding studies for underground areas occupied by personnel during LHC operation and the simulation of induced radioactivity around beam loss points. Integral part of the FLUKA development is a careful benchmarking of specific models as well as the code performance in complex, real life applications which is demonstrated with examples of studies relevant to radiation protection at the LHC. (author)

  14. A Non-Linear Digital Computer Model Requiring Short Computation Time for Studies Concerning the Hydrodynamics of the BWR

    Energy Technology Data Exchange (ETDEWEB)

    Reisch, F; Vayssier, G

    1969-05-15

    This non-linear model serves as one of the blocks in a series of codes to study the transient behaviour of BWR or PWR type reactors. This program is intended to be the hydrodynamic part of the BWR core representation or the hydrodynamic part of the PWR heat exchanger secondary side representation. The equations have been prepared for the CSMP digital simulation language. By using the most suitable integration routine available, the ratio of simulation time to real time is about one on an IBM 360/75 digital computer. Use of the slightly different language DSL/40 on an IBM 7044 computer takes about four times longer. The code has been tested against the Eindhoven loop with satisfactory agreement.

  15. EFFECT OF GEOMETRIC CONFIGURATIONS ON HYDRODYNAMIC PERFORMANCE ASSESSMENT OF A MARINE PROPELLER

    Directory of Open Access Journals (Sweden)

    Samir. E. Belhenniche

    2016-12-01

    Full Text Available The present paper deals with the effect of the geometric characteristics on the propeller hydrodynamic performances. Several propeller configurations are created by changing number of blades, expanded area and pitch ratios. The Reynolds-Averaged Navier-Stokes (RANS equations are solved using the commercial code FLUENT 6.3.26. The standard

  16. A k-distribution-based radiation code and its computational optimization for an atmospheric general circulation model

    International Nuclear Information System (INIS)

    Sekiguchi, Miho; Nakajima, Teruyuki

    2008-01-01

    The gas absorption process scheme in the broadband radiative transfer code 'mstrn8', which is used to calculate atmospheric radiative transfer efficiently in a general circulation model, is improved. Three major improvements are made. The first is an update of the database of line absorption parameters and the continuum absorption model. The second is a change to the definition of the selection rule for gas absorption used to choose which absorption bands to include. The last is an upgrade of the optimization method used to decrease the number of quadrature points used for numerical integration in the correlated k-distribution approach, thereby realizing higher computational efficiency without losing accuracy. The new radiation package termed 'mstrnX' computes radiation fluxes and heating rates with errors less than 0.6 W/m 2 and 0.3 K/day, respectively, through the troposphere and the lower stratosphere for any standard AFGL atmospheres. A serious cold bias problem of an atmospheric general circulation model using the ancestor code 'mstrn8' is almost solved by the upgrade to 'mstrnX'

  17. Combined convective and diffusive modeling of the ring current and radiation belt electron dynamics using the VERB-4D code

    Science.gov (United States)

    Aseev, N.; Shprits, Y.; Drozdov, A.; Kellerman, A. C.; Wang, D.

    2017-12-01

    Ring current and radiation belts are key elements in the global dynamics of the Earth's magnetosphere. Comprehensive mathematical models are useful tools that allow us to understand the multiscale dynamics of these charged particle populations. In this work, we present results of simulations of combined ring current - radiation belt electron dynamics using the four-dimensional Versatile Electron Radiation Belt (VERB-4D) code. The VERB-4D code solves the modified Fokker-Planck equation including convective terms and models simultaneously ring current (1 - 100 keV) and radiation belt (100 keV - several MeV) electron dynamics. We apply the code to the number of geomagnetic storms that occurred in the past, compare the results with different satellite observations, and show how low-energy particles can affect the high-energy populations. Particularly, we use data from Polar Operational Environmental Satellite (POES) mission that provides a very good MLT coverage with 1.5-hour time resolution. The POES data allow us to validate the approach of the VERB-4D code for modeling MLT-dependent processes such as electron drift, wave-particle interactions, and magnetopause shadowing. We also show how different simulation parameters and empirical models can affect the results, making a particular emphasis on the electric and magnetic field models. This work will help us reveal advantages and disadvantages of the approach behind the code and determine its prediction efficiency.

  18. Numerical methods for Lagrangian hydrodynamics applied to inertial fusion

    International Nuclear Information System (INIS)

    Maire, P.H.; Breil, J.; Galera, S.; Schurtz, G.

    2009-01-01

    CHIC is a code of Lagrangian hydrodynamics and implosion that has been developed since 2003 for the simulation of plasma experiments concerning inertial fusion. The transport of electron energy is assured with the Spitzer-Harm diffusion model with flux limiter. The propagation of the laser beams inside the plasma is computed by an algorithm of 3-dimensional beam launching that takes into account refraction as well as collisional absorption. The self-generated transverse magnetic fields are assessed by a magnetohydrodynamics model that stems from a generalized Ohm's law. The coupling with electron energy transport is assured with Braginskii conduction model. The validation of this code has been performed with various plasma experiments. (A.C.)

  19. Inhibition of the receptor for advanced glycation end-products (RAGE) protects from secondhand smoke (SHS)-induced intrauterine growth restriction IUGR in mice.

    Science.gov (United States)

    Lewis, Joshua B; Mejia, Camilo; Jordan, Clinton; Monson, Troy D; Bodine, Jared S; Dunaway, Todd M; Egbert, Kaleb M; Lewis, Adam L; Wright, Tanner J; Ogden, K Connor; Broberg, Dallin S; Hall, Parker D; Nelson, Shawn M; Hirschi, Kelsey M; Reynolds, Paul R; Arroyo, Juan A

    2017-12-01

    Intrauterine growth restriction (IUGR) is a disease affecting 10% of all pregnancies. IUGR is associated with maternal, fetal, or placental abnormalities. Studies investigating the effects of secondhand smoke (SHS) exposure and IUGR are limited. The receptor for advanced glycation end-products (RAGE) is a pro-inflammatory transmembrane receptor increased by SHS in the placenta. We tested the hypothesis that inhibition of RAGE during SHS exposure protects from smoke-induced IUGR. C57BL/6 mice were exposed to SHS or SHS + semi-synthetic glycosaminoglycan ethers (SAGEs) known to inhibit RAGE signaling. Trophoblast cells were treated with cigarette smoke extract (CSE) with or without SAGEs in order to address the effects of RAGE inhibition during trophoblast invasion in vitro. SHS-treated mice demonstrated a significant reduction in fetal weight (7.35-fold, P ≤ 0.0001) and placental weight (1.13-fold, P ≤ 0.0001) compared with controls. Mice co-treated with SHS and SAGEs were protected from SHS-induced fetal weights decreases. SHS treatment of C57BL/6 mice activated placental extracellular signal-regulated kinase (ERK) (3.0-fold, P ≤ 0.05), JNK (2.4-fold, P ≤ 0.05) and p38 (2.1-fold, P ≤ 0.05) and the expression of inflammatory mediators including TNF-α (1.34-fold, P ≤ 0.05) and IL-1β (1.03-fold, P ≤ 0.05). SHS-mediated activation of these molecules was reduced to basal levels when SAGE was co-administered. Invasion of trophoblast cells decreased 92% (P < 0.002) when treated with CSE and CSE-mediated invasion was completely reversed by SAGEs. We conclude that RAGE inhibition protects against fetal weight loss during SHS-induced IUGR. These studies provide insight into tobacco-mediated IUGR development and clarify avenues that may be helpful in the alleviation of placental complications.

  20. The effect on radiation damage of structural material in a hybrid system by using a Monte Carlo radiation transport code

    International Nuclear Information System (INIS)

    Günay, Mehtap; Şarer, Başar; Kasap, Hızır

    2014-01-01

    Highlights: • The effects of some fluids on gas production rates in structural material were investigated. • The MCNPX-2.7.0 Monte Carlo code was used for three-dimensional calculations. • It was found that biggest contribution to gas production rates comes from Fe isotope of the. • The desirable values for 5% SFG-PuO 2 with respect to radiation damage were specified. - Abstract: In this study, the molten salt-heavy metal mixtures 99–95% Li20Sn80-1-5% SFG-Pu, 99–95% Li20Sn80-1-5% SFG-PuF4, 99-95% Li20Sn80-1-5% SFG-PuO2 were used as fluids. The fluids were used in the liquid first-wall, blanket and shield zones of the designed hybrid reactor system. 9Cr2WVTa ferritic steel with the width of 4 cm was used as the structural material. The parameters of radiation damage are proton, deuterium, tritium, He-3 and He-4 gas production rates. In this study, the effects of the selected fluid on the radiation damage, in terms of individual as well as total isotopes in the structural material, were investigated for 30 full power years (FPYs). Three-dimensional analyses were performed using the most recent version of the MCNPX-2.7.0 Monte Carlo radiation transport code and the ENDF/B-VII.0 nuclear data library

  1. Coupled Hydrodynamic and Wave Propagation Modeling for the Source Physics Experiment: Study of Rg Wave Sources for SPE and DAG series.

    Science.gov (United States)

    Larmat, C. S.; Delorey, A.; Rougier, E.; Knight, E. E.; Steedman, D. W.; Bradley, C. R.

    2017-12-01

    This presentation reports numerical modeling efforts to improve knowledge of the processes that affect seismic wave generation and propagation from underground explosions, with a focus on Rg waves. The numerical model is based on the coupling of hydrodynamic simulation codes (Abaqus, CASH and HOSS), with a 3D full waveform propagation code, SPECFEM3D. Validation datasets are provided by the Source Physics Experiment (SPE) which is a series of highly instrumented chemical explosions at the Nevada National Security Site with yields from 100kg to 5000kg. A first series of explosions in a granite emplacement has just been completed and a second series in alluvium emplacement is planned for 2018. The long-term goal of this research is to review and improve current existing seismic sources models (e.g. Mueller & Murphy, 1971; Denny & Johnson, 1991) by providing first principles calculations provided by the coupled codes capability. The hydrodynamic codes, Abaqus, CASH and HOSS, model the shocked, hydrodynamic region via equations of state for the explosive, borehole stemming and jointed/weathered granite. A new material model for unconsolidated alluvium materials has been developed and validated with past nuclear explosions, including the 10 kT 1965 Merlin event (Perret, 1971) ; Perret and Bass, 1975). We use the efficient Spectral Element Method code, SPECFEM3D (e.g. Komatitsch, 1998; 2002), and Geologic Framework Models to model the evolution of wavefield as it propagates across 3D complex structures. The coupling interface is a series of grid points of the SEM mesh situated at the edge of the hydrodynamic code domain. We will present validation tests and waveforms modeled for several SPE tests which provide evidence that the damage processes happening in the vicinity of the explosions create secondary seismic sources. These sources interfere with the original explosion moment and reduces the apparent seismic moment at the origin of Rg waves up to 20%.

  2. Neuroprotective effects of vildagliptin in rat rotenone Parkinson's disease model: role of RAGE-NFκB and Nrf2-antioxidant signaling pathways.

    Science.gov (United States)

    Abdelsalam, Rania M; Safar, Marwa M

    2015-06-01

    Gliptins have been recently shown to conquer neuronal degeneration in cell cultures via modulating glucagon-like peptide (GLP)-1. This peptide produced in the gut not only crosses the blood-brain barrier but is also synthesized in the brain and acts on GLP-1R exerting central anti-inflammatory and antiapoptotic effects, thus impeding neuronal damage. This study investigated the antiparkinsonian effect of vildagliptin, a dipeptidyl peptidase (DPP)-4 inhibitor in a rat rotenone model targeting mainly the RAGE-NFκB/Nrf2-signaling pathways, to judge the potential anti-inflammatory/antioxidant effects of the drug. Vildagliptin markedly improved the motor performance in the open field and rotarod tests, effects that were emphasized by the accompanied reduction in striatal dopamine content. It modified the striatal energy level (ADP/ATP) associated with partial antagonism of body weight reduction. This incretin enhancer suppressed nuclear factor (NF)κB and, consequently, the downstream inflammatory mediator tumor necrosis factor-α. Normalization of receptor for advanced glycated end product (RAGE) is a main finding which justifies the anti-inflammatory effects of vildagliptin, together with hampering striatal inducible nitric oxide synthase, intracellular adhesion molecule-1 as well as myeloperoxidase. The antioxidant potential of vildagliptin was depicted as entailing reduction in thiobarbituric acid-reactive substances and the transcriptional factor Nrf-2 level. Vildagliptin guarded against neuronal demise through an antiapoptotic effect as reflected by the reduction in the mitochondrial matrix component cytochrome c and the key downstream executioner caspase-3. In conclusion, vildagliptin is endowed with various neuroprotective effects and thus can be a promising candidate for the management of Parkinson's disease. In the rat rotenone model of Parkinson's disease (PD), striatal RAGE/NFκB signaling was up-regulated associated with elevated levels of inflammatory

  3. Process of cross section generation for radiation shielding calculations, using the NJOY code

    International Nuclear Information System (INIS)

    Ono, S.; Corcuera, R.P.

    1986-10-01

    The process of multigroup cross sections generation for radiation shielding calculations, using the NJOY code, is explained. Photon production cross sections, processed by the GROUPR module, and photon interaction cross sections processed by the GAMINR are given. These data are compared with the data produced by the AMPX system and published data. (author) [pt

  4. Radiation transport simulation in gamma irradiator systems using E G S 4 Monte Carlo code and dose mapping calculations based on point kernel technique

    International Nuclear Information System (INIS)

    Raisali, G.R.

    1992-01-01

    A series of computer codes based on point kernel technique and also Monte Carlo method have been developed. These codes perform radiation transport calculations for irradiator systems having cartesian, cylindrical and mixed geometries. The monte Carlo calculations, the computer code 'EGS4' has been applied to a radiation processing type problem. This code has been acompanied by a specific user code. The set of codes developed include: GCELLS, DOSMAPM, DOSMAPC2 which simulate the radiation transport in gamma irradiator systems having cylinderical, cartesian, and mixed geometries, respectively. The program 'DOSMAP3' based on point kernel technique, has been also developed for dose rate mapping calculations in carrier type gamma irradiators. Another computer program 'CYLDETM' as a user code for EGS4 has been also developed to simulate dose variations near the interface of heterogeneous media in gamma irradiator systems. In addition a system of computer codes 'PRODMIX' has been developed which calculates the absorbed dose in the products with different densities. validation studies of the calculated results versus experimental dosimetry has been performed and good agreement has been obtained

  5. Quenching star formation with quasar outflows launched by trapped IR radiation

    Science.gov (United States)

    Costa, Tiago; Rosdahl, Joakim; Sijacki, Debora; Haehnelt, Martin G.

    2018-06-01

    We present cosmological radiation-hydrodynamic simulations, performed with the code RAMSES-RT, of radiatively-driven outflows in a massive quasar host halo at z = 6. Our simulations include both single- and multi-scattered radiation pressure on dust from a quasar and are compared against simulations performed with thermal feedback. For radiation pressure-driving, we show that there is a critical quasar luminosity above which a galactic outflow is launched, set by the equilibrium of gravitational and radiation forces. While this critical luminosity is unrealistically high in the single-scattering limit for plausible black hole masses, it is in line with a ≈ 3 × 10^9 M_⊙ black hole accreting at its Eddington limit, if infrared (IR) multi-scattering radiation pressure is included. The outflows are fast (v ≳ 1000 km s^{-1}) and strongly mass-loaded with peak mass outflow rates ≈ 10^3 - 10^4 M_⊙ yr^{-1}, but short-lived (star formation in the bulge. We hence argue that radiation pressure-driven feedback may be an important ingredient in regulating star formation in compact starbursts, especially during the quasar's `obscured' phase.

  6. Invariant description of solutions of hydrodynamic-type systems in hodograph space: hydrodynamic surfaces

    International Nuclear Information System (INIS)

    Ferapontov, E.V.

    2002-01-01

    Hydrodynamic surfaces are solutions of hydrodynamic-type systems viewed as non-parametrized submanifolds of the hodograph space. We propose an invariant differential-geometric characterization of hydrodynamic surfaces by expressing the curvature form of the characteristic web in terms of the reciprocal invariants. (author)

  7. Time-dependent mass loss from hot stars with and without radiative driving

    International Nuclear Information System (INIS)

    Castor, J.I.; Owocki, S.P.; Rybicki, G.B.

    1988-01-01

    A numerical hydrodynamics code is used to investigate two aspects of the winds of hot stars. The first is the question of the instability of the massive radiatively-driven wind of an O star that is caused by the line shape mechanism: modulation of the radiation force by velocity fluctuations. The evolution of this instability is studied in a model O star wind, and is found, /ital modulo/ some numerical uncertainty, to lead to wave structures that are compatible with observations of wind instabilities. The other area of investigation is of main-sequence B star winds. Attempts were made to simulate a radiatively-driven and a pulsation-driven wind in a B star, but in each case the wind turned out to be very weak. It is argued that the pulsation-driven wind model is not likely to apply to B stars. 28 refs., 11 figs

  8. Collection of regulatory texts relative to radiation protection. Part 2: by-laws, decisions, non-codified decrees / Collection of legal and statutory provisions relative to radiation protection. Part 2: by-laws and decisions taken in application of the Public Health Code and Labour Code concerning the protection of populations, patients and workers against the risks of ionizing radiations

    International Nuclear Information System (INIS)

    Rivas, Robert; Feries, Jean; Marzorati, Frank; Chevalier, Celine; Lachaume, Jean-Luc

    2012-01-01

    This second part gathers texts extracted from the Public Health Code and related to ionizing radiations (general measures for the protection of the population, exposure to natural radiations, general regime of authorizations and declarations, purchase, retailing, importation, exportation, transfer and elimination of radioactive sources, protection of persons exposed to ionizing radiations for medical or forensics purposes, situations of radiological emergency and of sustained exposure to ionizing radiations, control), to the safety of waters and food products, and to the control of medical devices, to the protection of patients. It also contains extracts for the Labour Code related to workers protection. This document is an update of the previous version from March 2011

  9. Inhibition of Methylglyoxal-Induced AGEs/RAGE Expression Contributes to Dermal Protection by N-Acetyl-L-Cysteine

    Directory of Open Access Journals (Sweden)

    Chun-tao Yang

    2017-02-01

    Full Text Available Background/Aim: Accumulation of advanced glycation end products (AGEs is a major cause of diabetes mellitus (DM skin complications. Methylglyoxal (MGO, a reactive dicarbonyl compound, is a crucial intermediate of AGEs generation. N-acetyl-L-cysteine (NAC, an active ingredient of some medicines, can induce endogenous GSH and hydrogen sulfide generation, and set off a condensation reaction with MGO. However, there is rare evidence to show NAC can alleviate DM-induced skin injury through inhibition of AGEs generation or toxicity. The present study aimed to observe the effects of NAC on MGO-induced inflammatory injury and investigate the roles of AGEs and its receptor (RAGE in NAC’s dermal protection in human HaCaT keratinocytes. Methods: The cells were exposed to MGO to simulate a high MGO status in diabetic blood or tissues. The content of AGEs in serum or cell medium was measured with ELISA. The protective effects of NAC against MGO-induce injury were evaluated by administration before MGO one hour, in virtue of cell viability, mitochondrial membrane potential, inflammation reaction, nuclear factor (NF-κB activation, matrix metalloproteinase (MMP-9 expression, as well as cellular behavioral function. Results: We found the AGEs levels of patients with DM were elevated comparing with healthy volunteers. The in vitro AGEs generation was also able to be enhanced by the exposure of HaCaT cells to MGO, which reduced dose-dependently cellular viability, damaged mitochondrial function, triggered secretion of interleukin (IL-6 and IL-8, activated NF-κB and upregulated MMP-9 expression. Furthermore, the exposure caused cellular adhesion and migration dysfunction, as well as collagen type I inhibition. Importantly, before the exposure to MGO, the preconditioning with NAC significantly attenuated MGO-induced AGEs generation, improved cellular viability and mitochondrial function, partially reversed the overexpression of proinflammatory factors and MMP-9

  10. Plasma hydrodynamics of the intense laser-cluster interaction*

    Science.gov (United States)

    Milchberg, Howard

    2002-11-01

    We present a 1D hydrodynamic model of the intense laser-cluster interaction in which the laser field is treated self-consistently. We find that for clusters initially as small as 25Å in radius, for which the hydrodynamic model is appropriate, nonuniform expansion of the heated material results in long-time resonance of the laser field at the critical density plasma layer. A significant result of this is that the ponderomotive force, which is enhanced at the critical density surface, can be large enough to strongly modify the plasma hydrodynamics, even at laser intensities as low as 10^15 W/cm^2 for 800 nm laser pulses. Recent experiments in EUV and x-ray generation as a function of laser pulsewidth [1], and femtosecond time-resolved measurements of cluster transient polarizability [2] provide strong support for the basic physics of this model. Recent results using a 2D hybrid fluid/PIC code show qualitative agreement with the 1D hydrocode [3]. *Work supported by the National Science Foundation and the EUV-LLC. 1. E. Parra, I. Alexeev, J. Fan, K. Kim, S.J. McNaught, and H. M. Milchberg, Phys. Rev. E 62, R5931 (2000). 2. K.Y. Kim, I. Alexeev, E. Parra, and H.M. Milchberg, submitted for publication. 3. T. Taguchi, T. Antonsen, and H.M Milchberg, this meeting.

  11. Thinking through Moments of Sexual Refusal in "Looking for Alibrandi" and "The Rage in Placid Lake"

    Science.gov (United States)

    Clarke, Kyra

    2016-01-01

    This paper explores two scenarios in which young women refuse the sexual advances of young men in the films "Looking for Alibrandi" and "The Rage in Placid Lake." The paper highlights the heteronormative nature of education around refusing sex, which reinstates gendered stereotypes of masculine as active and feminine as…

  12. Collection of regulatory texts relative to radiation protection. Part 2: orders and decisions taken in application of the Public Health Code and Labour Code concerning the protection of populations, patients and workers against the risks of ionizing radiations; Recueil de textes reglementaires relatifs a la radioprotection. Partie 2: arretes et decisions pris en application du Code de Sante Publique et du Code du Travail concernant la protection de la population, des patients et des travailleurs contre les dangers des rayonnements ionisants

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2007-05-15

    This collection of texts includes the general measures of population protection, exposure to natural radiations, general system of authorizations and statements, protection of persons exposed to ionizing radiations for medical purpose, situations of radiological emergency and long exposure to ionizing radiations, penal dispositions, application of the Public Health code and application of the Labour code. Chronological contents by date of publication is given. (N.C.)

  13. The Shock/Shear platform for planar radiation-hydrodynamics experiments on the National Ignition Facility

    Energy Technology Data Exchange (ETDEWEB)

    Doss, F. W., E-mail: fdoss@lanl.gov; Kline, J. L.; Flippo, K. A.; Perry, T. S.; DeVolder, B. G.; Tregillis, I.; Loomis, E. N.; Merritt, E. C.; Murphy, T. J.; Welser-Sherrill, L.; Fincke, J. R. [Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States)

    2015-05-15

    An indirectly-driven shock tube experiment fielded on the National Ignition Facility (NIF) was used to create a high-energy-density hydrodynamics platform at unprecedented scale. Scaling up a shear-induced mixing experiment previously fielded at OMEGA, the NIF shear platform drives 130 μm/ns shocks into a CH foam-filled shock tube (∼ 60 mg/cc) with interior dimensions of 1.5 mm diameter and 5 mm length. The pulse-shaping capabilities of the NIF are used to extend the drive for >10 ns, and the large interior tube volumes are used to isolate physics-altering edge effects from the region of interest. The scaling of the experiment to the NIF allows for considerable improvement in maximum driving time of hydrodynamics, in fidelity of physics under examination, and in diagnostic clarity. Details of the experimental platform and post-shot simulations used in the analysis of the platform-qualifying data are presented. Hydrodynamic scaling is used to compare shear data from OMEGA with that from NIF, suggesting a possible change in the dimensionality of the instability at late times from one platform to the other.

  14. WHITE DWARF MERGERS ON ADAPTIVE MESHES. I. METHODOLOGY AND CODE VERIFICATION

    Energy Technology Data Exchange (ETDEWEB)

    Katz, Max P.; Zingale, Michael; Calder, Alan C.; Swesty, F. Douglas [Department of Physics and Astronomy, Stony Brook University, Stony Brook, NY, 11794-3800 (United States); Almgren, Ann S.; Zhang, Weiqun [Center for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States)

    2016-03-10

    The Type Ia supernova (SN Ia) progenitor problem is one of the most perplexing and exciting problems in astrophysics, requiring detailed numerical modeling to complement observations of these explosions. One possible progenitor that has merited recent theoretical attention is the white dwarf (WD) merger scenario, which has the potential to naturally explain many of the observed characteristics of SNe Ia. To date there have been relatively few self-consistent simulations of merging WD systems using mesh-based hydrodynamics. This is the first paper in a series describing simulations of these systems using a hydrodynamics code with adaptive mesh refinement. In this paper we describe our numerical methodology and discuss our implementation in the compressible hydrodynamics code CASTRO, which solves the Euler equations, and the Poisson equation for self-gravity, and couples the gravitational and rotation forces to the hydrodynamics. Standard techniques for coupling gravitation and rotation forces to the hydrodynamics do not adequately conserve the total energy of the system for our problem, but recent advances in the literature allow progress and we discuss our implementation here. We present a set of test problems demonstrating the extent to which our software sufficiently models a system where large amounts of mass are advected on the computational domain over long timescales. Future papers in this series will describe our treatment of the initial conditions of these systems and will examine the early phases of the merger to determine its viability for triggering a thermonuclear detonation.

  15. Two-temperature hydrodynamics of laser-generated ultrashort shock waves in elasto-plastic solids

    International Nuclear Information System (INIS)

    Ilnitsky, Denis K; Migdal, Kirill P; Khokhlov, Viktor A; Inogamov, Nail A; Petrov, Yurii V; Anisimov, Sergey I; Zhakhovsky, Vasily V; Khishchenko, Konstantin V

    2014-01-01

    Shock-wave generation by ultrashort laser pulses opens new doors for study of hidden processes in materials happened at an atomic-scale spatiotemporal scales. The poorly explored mechanism of shock generation is started from a short-living two-temperature (2T) state of solid in a thin surface layer where laser energy is deposited. Such 2T state represents a highly non-equilibrium warm dense matter having cold ions and hot electrons with temperatures of 1-2 orders of magnitude higher than the melting point. Here for the first time we present results obtained by our new hybrid hydrodynamics code combining detailed description of 2T states with a model of elasticity together with a wide-range equation of state of solid. New hydro-code has higher accuracy in the 2T stage than molecular dynamics method, because it includes electron related phenomena including thermal conduction, electron-ion collisions and energy transfer, and electron pressure. From the other hand the new code significantly improves our previous version of 2T hydrodynamics model, because now it is capable of reproducing the elastic compression waves, which may have an imprint of supersonic melting like as in MD simulations. With help of the new code we have solved a difficult problem of thermal and dynamic coupling of a molten layer with an uniaxially compressed elastic solid. This approach allows us to describe the recent femtosecond laser experiments.

  16. FINDING THE FIRST COSMIC EXPLOSIONS. II. CORE-COLLAPSE SUPERNOVAE

    International Nuclear Information System (INIS)

    Whalen, Daniel J.; Joggerst, Candace C.; Fryer, Chris L.; Stiavelli, Massimo; Heger, Alexander; Holz, Daniel E.

    2013-01-01

    Understanding the properties of Population III (Pop III) stars is prerequisite to elucidating the nature of primeval galaxies, the chemical enrichment and reionization of the early intergalactic medium, and the origin of supermassive black holes. While the primordial initial mass function (IMF) remains unknown, recent evidence from numerical simulations and stellar archaeology suggests that some Pop III stars may have had lower masses than previously thought, 15-50 M ☉ in addition to 50-500 M ☉ . The detection of Pop III supernovae (SNe) by JWST, WFIRST, or the TMT could directly probe the primordial IMF for the first time. We present numerical simulations of 15-40 M ☉ Pop III core-collapse SNe performed with the Los Alamos radiation hydrodynamics code RAGE. We find that they will be visible in the earliest galaxies out to z ∼ 10-15, tracing their star formation rates and in some cases revealing their positions on the sky. Since the central engines of Pop III and solar-metallicity core-collapse SNe are quite similar, future detection of any Type II SNe by next-generation NIR instruments will in general be limited to this epoch.

  17. Asymptotic diffusion limit of cell temperature discretisation schemes for thermal radiation transport

    Energy Technology Data Exchange (ETDEWEB)

    Smedley-Stevenson, Richard P., E-mail: richard.smedley-stevenson@awe.co.uk [AWE PLC, Aldermaston, Reading, Berkshire, RG7 4PR (United Kingdom); Department of Earth Science and Engineering, Imperial College London, SW7 2AZ (United Kingdom); McClarren, Ryan G., E-mail: rmcclarren@ne.tamu.edu [Department of Nuclear Engineering, Texas A & M University, College Station, TX 77843-3133 (United States)

    2015-04-01

    This paper attempts to unify the asymptotic diffusion limit analysis of thermal radiation transport schemes, for a linear-discontinuous representation of the material temperature reconstructed from cell centred temperature unknowns, in a process known as ‘source tilting’. The asymptotic limits of both Monte Carlo (continuous in space) and deterministic approaches (based on linear-discontinuous finite elements) for solving the transport equation are investigated in slab geometry. The resulting discrete diffusion equations are found to have nonphysical terms that are proportional to any cell-edge discontinuity in the temperature representation. Based on this analysis it is possible to design accurate schemes for representing the material temperature, for coupling thermal radiation transport codes to a cell centred representation of internal energy favoured by ALE (arbitrary Lagrange–Eulerian) hydrodynamics schemes.

  18. Asymptotic diffusion limit of cell temperature discretisation schemes for thermal radiation transport

    International Nuclear Information System (INIS)

    Smedley-Stevenson, Richard P.; McClarren, Ryan G.

    2015-01-01

    This paper attempts to unify the asymptotic diffusion limit analysis of thermal radiation transport schemes, for a linear-discontinuous representation of the material temperature reconstructed from cell centred temperature unknowns, in a process known as ‘source tilting’. The asymptotic limits of both Monte Carlo (continuous in space) and deterministic approaches (based on linear-discontinuous finite elements) for solving the transport equation are investigated in slab geometry. The resulting discrete diffusion equations are found to have nonphysical terms that are proportional to any cell-edge discontinuity in the temperature representation. Based on this analysis it is possible to design accurate schemes for representing the material temperature, for coupling thermal radiation transport codes to a cell centred representation of internal energy favoured by ALE (arbitrary Lagrange–Eulerian) hydrodynamics schemes

  19. Ray-tracing 3D dust radiative transfer with DART-Ray: code upgrade and public release

    Science.gov (United States)

    Natale, Giovanni; Popescu, Cristina C.; Tuffs, Richard J.; Clarke, Adam J.; Debattista, Victor P.; Fischera, Jörg; Pasetto, Stefano; Rushton, Mark; Thirlwall, Jordan J.

    2017-11-01

    We present an extensively updated version of the purely ray-tracing 3D dust radiation transfer code DART-Ray. The new version includes five major upgrades: 1) a series of optimizations for the ray-angular density and the scattered radiation source function; 2) the implementation of several data and task parallelizations using hybrid MPI+OpenMP schemes; 3) the inclusion of dust self-heating; 4) the ability to produce surface brightness maps for observers within the models in HEALPix format; 5) the possibility to set the expected numerical accuracy already at the start of the calculation. We tested the updated code with benchmark models where the dust self-heating is not negligible. Furthermore, we performed a study of the extent of the source influence volumes, using galaxy models, which are critical in determining the efficiency of the DART-Ray algorithm. The new code is publicly available, documented for both users and developers, and accompanied by several programmes to create input grids for different model geometries and to import the results of N-body and SPH simulations. These programmes can be easily adapted to different input geometries, and for different dust models or stellar emission libraries.

  20. HELIOS: An Open-source, GPU-accelerated Radiative Transfer Code for Self-consistent Exoplanetary Atmospheres

    Science.gov (United States)

    Malik, Matej; Grosheintz, Luc; Mendonça, João M.; Grimm, Simon L.; Lavie, Baptiste; Kitzmann, Daniel; Tsai, Shang-Min; Burrows, Adam; Kreidberg, Laura; Bedell, Megan; Bean, Jacob L.; Stevenson, Kevin B.; Heng, Kevin

    2017-02-01

    We present the open-source radiative transfer code named HELIOS, which is constructed for studying exoplanetary atmospheres. In its initial version, the model atmospheres of HELIOS are one-dimensional and plane-parallel, and the equation of radiative transfer is solved in the two-stream approximation with nonisotropic scattering. A small set of the main infrared absorbers is employed, computed with the opacity calculator HELIOS-K and combined using a correlated-k approximation. The molecular abundances originate from validated analytical formulae for equilibrium chemistry. We compare HELIOS with the work of Miller-Ricci & Fortney using a model of GJ 1214b, and perform several tests, where we find: model atmospheres with single-temperature layers struggle to converge to radiative equilibrium; k-distribution tables constructed with ≳ 0.01 cm-1 resolution in the opacity function (≲ {10}3 points per wavenumber bin) may result in errors ≳ 1%-10% in the synthetic spectra; and a diffusivity factor of 2 approximates well the exact radiative transfer solution in the limit of pure absorption. We construct “null-hypothesis” models (chemical equilibrium, radiative equilibrium, and solar elemental abundances) for six hot Jupiters. We find that the dayside emission spectra of HD 189733b and WASP-43b are consistent with the null hypothesis, while the latter consistently underpredicts the observed fluxes of WASP-8b, WASP-12b, WASP-14b, and WASP-33b. We demonstrate that our results are somewhat insensitive to the choice of stellar models (blackbody, Kurucz, or PHOENIX) and metallicity, but are strongly affected by higher carbon-to-oxygen ratios. The code is publicly available as part of the Exoclimes Simulation Platform (exoclime.net).

  1. Pion interferometry theory for the hydrodynamic stage of multiple processes

    International Nuclear Information System (INIS)

    Makhlin, A.N.; Sinyukov, Yu.M.

    1986-01-01

    The double pion inclusive cross section for identical particles is described in hydrodynamical theory of multiparticle production. The pion interferometry theory is developed for the case when secondary particles are generated against the background of internal relativistic motion of radiative hadron matter. The connection between correlation functions in various schemes of experiment is found within the framework of relativistic Wigner functions formalism

  2. Using Procedure Codes to Define Radiation Toxicity in Administrative Data: The Devil is in the Details.

    Science.gov (United States)

    Meyer, Anne-Marie; Kuo, Tzy-Mey; Chang, YunKyung; Carpenter, William R; Chen, Ronald C; Sturmer, Til

    2017-05-01

    Systematic coding systems are used to define clinically meaningful outcomes when leveraging administrative claims data for research. How and when these codes are applied within a research study can have implications for the study validity and their specificity can vary significantly depending on treatment received. Data are from the Surveillance, Epidemiology, and End Results-Medicare linked dataset. We use propensity score methods in a retrospective cohort of prostate cancer patients first examined in a recently published radiation oncology comparative effectiveness study. With the narrowly defined outcome definition, the toxicity event outcome rate ratio was 0.88 per 100 person-years (95% confidence interval, 0.71-1.08). With the broadly defined outcome, the rate ratio was comparable, with 0.89 per 100 person-years (95% confidence interval, 0.76-1.04), although individual event rates were doubled. Some evidence of surveillance bias was suggested by a higher rate of endoscopic procedures the first year of follow-up in patients who received proton therapy compared with those receiving intensity-modulated radiation treatment (11.15 vs. 8.90, respectively). This study demonstrates the risk of introducing bias through subjective application of procedure codes. Careful consideration is required when using procedure codes to define outcomes in administrative data.

  3. General relativistic hydrodynamics with Adaptive-Mesh Refinement (AMR) and modeling of accretion disks

    Science.gov (United States)

    Donmez, Orhan

    We present a general procedure to solve the General Relativistic Hydrodynamical (GRH) equations with Adaptive-Mesh Refinement (AMR) and model of an accretion disk around a black hole. To do this, the GRH equations are written in a conservative form to exploit their hyperbolic character. The numerical solutions of the general relativistic hydrodynamic equations is done by High Resolution Shock Capturing schemes (HRSC), specifically designed to solve non-linear hyperbolic systems of conservation laws. These schemes depend on the characteristic information of the system. We use Marquina fluxes with MUSCL left and right states to solve GRH equations. First, we carry out different test problems with uniform and AMR grids on the special relativistic hydrodynamics equations to verify the second order convergence of the code in 1D, 2 D and 3D. Second, we solve the GRH equations and use the general relativistic test problems to compare the numerical solutions with analytic ones. In order to this, we couple the flux part of general relativistic hydrodynamic equation with a source part using Strang splitting. The coupling of the GRH equations is carried out in a treatment which gives second order accurate solutions in space and time. The test problems examined include shock tubes, geodesic flows, and circular motion of particle around the black hole. Finally, we apply this code to the accretion disk problems around the black hole using the Schwarzschild metric at the background of the computational domain. We find spiral shocks on the accretion disk. They are observationally expected results. We also examine the star-disk interaction near a massive black hole. We find that when stars are grounded down or a hole is punched on the accretion disk, they create shock waves which destroy the accretion disk.

  4. REFLA-1D/MODE 1: a computer program for reflood thermo-hydrodynamic analysis during PWR-LOCA user's manual

    International Nuclear Information System (INIS)

    Murao, Yoshio; Sugimoto, Jun; Okubo, Tsutomu

    1981-01-01

    This manual describes the REFLA-1D/MODE 1 reflood system analysis code. This code can solve the core thermo-hydrodynamics under forced flooding conditions and gravity feed conditions in a system similar to FLECHT-SET phase A. This manual describes the REFLA-1D/MODE 1 models and provides application information required to utilize REFLA-1D/MODE 1. (author)

  5. Synthesis of the scientific French speaking days on numerical codes in radiation protection, in radio physics and in dosimetry

    International Nuclear Information System (INIS)

    Paul, D.; Makovicka, L.; Ricard, M.

    2005-01-01

    Synthesis of the scientific French speaking days on numerical codes in radiation protection, in radio-physics and in dosimetry. The paper carries the title of 'French speaking' scientific days co-organized on October 2-3, 2003 in Sochaux by the SFRP, SFPM and FIRAM societies. It has for objective to establish the scientific balance sheet of this international event, to give the synthesis of current tendencies in the field of the development and of the use of the numerical codes in radiation protection, in radio-physics and in dosimetry. (author)

  6. Abstracts of digital computer code packages. Assembled by the Radiation Shielding Information Center. [Radiation transport codes

    Energy Technology Data Exchange (ETDEWEB)

    McGill, B.; Maskewitz, B.F.; Anthony, C.M.; Comolander, H.E.; Hendrickson, H.R.

    1976-01-01

    The term ''code package'' is used to describe a miscellaneous grouping of materials which, when interpreted in connection with a digital computer, enables the scientist--user to solve technical problems in the area for which the material was designed. In general, a ''code package'' consists of written material--reports, instructions, flow charts, listings of data, and other useful material and IBM card decks (or, more often, a reel of magnetic tape) on which the source decks, sample problem input (including libraries of data) and the BCD/EBCDIC output listing from the sample problem are written. In addition to the main code, and any available auxiliary routines are also included. The abstract format was chosen to give to a potential code user several criteria for deciding whether or not he wishes to request the code package. (RWR)

  7. Regulatory landscape of AGE-RAGE-oxidative stress axis and its modulation by PPARγ activation in high fructose diet-induced metabolic syndrome.

    Science.gov (United States)

    Cannizzaro, Luca; Rossoni, Giuseppe; Savi, Federica; Altomare, Alessandra; Marinello, Cristina; Saethang, Thammakorn; Carini, Marina; Payne, D Michael; Pisitkun, Trairak; Aldini, Giancarlo; Leelahavanichkul, Asada

    2017-01-01

    The AGE-RAGE-oxidative stress (AROS) axis is involved in the onset and progression of metabolic syndrome induced by a high-fructose diet (HFD). PPARγ activation is known to modulate metabolic syndrome; however a systems-level investigation looking at the protective effects of PPARγ activation as related to the AROS axis has not been performed. The aim of this work is to simultaneously characterize multiple molecular parameters within the AROS axis, using samples taken from different body fluids and tissues of a rat model of HFD-induced metabolic syndrome, in the presence or absence of a PPARγ agonist, Rosiglitazone (RGZ). Rats were fed with 60% HFD for the first half of the treatm