WorldWideScience

Sample records for querying biomedical terminologies

  1. Environmental/Biomedical Terminology Index

    Energy Technology Data Exchange (ETDEWEB)

    Huffstetler, J.K.; Dailey, N.S.; Rickert, L.W.; Chilton, B.D.

    1976-12-01

    The Information Center Complex (ICC), a centrally administered group of information centers, provides information support to environmental and biomedical research groups and others within and outside Oak Ridge National Laboratory. In-house data base building and development of specialized document collections are important elements of the ongoing activities of these centers. ICC groups must be concerned with language which will adequately classify and insure retrievability of document records. Language control problems are compounded when the complexity of modern scientific problem solving demands an interdisciplinary approach. Although there are several word lists, indexes, and thesauri specific to various scientific disciplines usually grouped as Environmental Sciences, no single generally recognized authority can be used as a guide to the terminology of all environmental science. If biomedical terminology for the description of research on environmental effects is also needed, the problem becomes even more complex. The building of a word list which can be used as a general guide to the environmental/biomedical sciences has been a continuing activity of the Information Center Complex. This activity resulted in the publication of the Environmental Biomedical Terminology Index (EBTI).

  2. Biomedical Terminology Mapper for UML projects.

    Science.gov (United States)

    Thibault, Julien C; Frey, Lewis

    2013-01-01

    As the biomedical community collects and generates more and more data, the need to describe these datasets for exchange and interoperability becomes crucial. This paper presents a mapping algorithm that can help developers expose local implementations described with UML through standard terminologies. The input UML class or attribute name is first normalized and tokenized, then lookups in a UMLS-based dictionary are performed. For the evaluation of the algorithm 142 UML projects were extracted from caGrid and automatically mapped to National Cancer Institute (NCI) terminology concepts. Resulting mappings at the UML class and attribute levels were compared to the manually curated annotations provided in caGrid. Results are promising and show that this type of algorithm could speed-up the tedious process of mapping local implementations to standard biomedical terminologies.

  3. Analyzing rare diseases terms in biomedical terminologies

    Directory of Open Access Journals (Sweden)

    Erika Pasceri

    2012-03-01

    Full Text Available Rare disease patients too often face common problems, including the lack of access to correct diagnosis, lack of quality information on the disease, lack of scientific knowledge of the disease, inequities and difficulties in access to treatment and care. These things could be changed by implementing a comprehensive approach to rare diseases, increasing international cooperation in scientific research, by gaining and sharing scientific knowledge about and by developing tools for extracting and sharing knowledge. A significant aspect to analyze is the organization of knowledge in the biomedical field for the proper management and recovery of health information. For these purposes, the sources needed have been acquired from the Office of Rare Diseases Research, the National Organization of Rare Disorders and Orphanet, organizations that provide information to patients and physicians and facilitate the exchange of information among different actors involved in this field. The present paper shows the representation of rare diseases terms in biomedical terminologies such as MeSH, ICD-10, SNOMED CT and OMIM, leveraging the fact that these terminologies are integrated in the UMLS. At the first level, it was analyzed the overlap among sources and at a second level, the presence of rare diseases terms in target sources included in UMLS, working at the term and concept level. We found that MeSH has the best representation of rare diseases terms.

  4. Exploiting parallel corpora to scale up multilingual biomedical terminologies.

    Science.gov (United States)

    Hellrich, Johannes; Hahn, Udo

    2014-01-01

    Creating and maintaining biomedical terminologies for multiple natural languages is a resource-expensive task, typically carried out by human domain experts. We here report on efforts to computationally support this process by treating term acquisition as a machine translation-guided classification problem capitalizing on parallel corpora. We report on experiments for French, German, Spanish and Dutch parts of a UMLS-derived terminology for which we generated 18 k, 23 k, 19 k and 12 k new terms and synonyms, respectively. Based on expert assessments of a novel German terminology segment about 80% of the newly acquired terms were judged as bio-medically reasonable and terminologically valid.

  5. Enabling Ontology Based Semantic Queries in Biomedical Database Systems.

    Science.gov (United States)

    Zheng, Shuai; Wang, Fusheng; Lu, James

    2014-03-01

    There is a lack of tools to ease the integration and ontology based semantic queries in biomedical databases, which are often annotated with ontology concepts. We aim to provide a middle layer between ontology repositories and semantically annotated databases to support semantic queries directly in the databases with expressive standard database query languages. We have developed a semantic query engine that provides semantic reasoning and query processing, and translates the queries into ontology repository operations on NCBO BioPortal. Semantic operators are implemented in the database as user defined functions extended to the database engine, thus semantic queries can be directly specified in standard database query languages such as SQL and XQuery. The system provides caching management to boosts query performance. The system is highly adaptable to support different ontologies through easy customizations. We have implemented the system DBOntoLink as an open source software, which supports major ontologies hosted at BioPortal. DBOntoLink supports a set of common ontology based semantic operations and have them fully integrated with a database management system IBM DB2. The system has been deployed and evaluated with an existing biomedical database for managing and querying image annotations and markups (AIM). Our performance study demonstrates the high expressiveness of semantic queries and the high efficiency of the queries.

  6. [Big data, medical language and biomedical terminology systems].

    Science.gov (United States)

    Schulz, Stefan; López-García, Pablo

    2015-08-01

    A variety of rich terminology systems, such as thesauri, classifications, nomenclatures and ontologies support information and knowledge processing in health care and biomedical research. Nevertheless, human language, manifested as individually written texts, persists as the primary carrier of information, in the description of disease courses or treatment episodes in electronic medical records, and in the description of biomedical research in scientific publications. In the context of the discussion about big data in biomedicine, we hypothesize that the abstraction of the individuality of natural language utterances into structured and semantically normalized information facilitates the use of statistical data analytics to distil new knowledge out of textual data from biomedical research and clinical routine. Computerized human language technologies are constantly evolving and are increasingly ready to annotate narratives with codes from biomedical terminology. However, this depends heavily on linguistic and terminological resources. The creation and maintenance of such resources is labor-intensive. Nevertheless, it is sensible to assume that big data methods can be used to support this process. Examples include the learning of hierarchical relationships, the grouping of synonymous terms into concepts and the disambiguation of homonyms. Although clear evidence is still lacking, the combination of natural language technologies, semantic resources, and big data analytics is promising.

  7. Standards and biomedical terminologies: the CEN TC 251 and ISO TC 215 categorial structures. A step towards increased interoperability.

    Science.gov (United States)

    Rodrigues, Jean M; Kumar, Anand; Bousquet, Cédric; Trombert, Béatrice

    2008-01-01

    Among different biomedical terminologies standardisation strategies the European Standard Body CEN TC 251 followed by the ISO TC 215 have stated that it was not possible to convince the different European or international member states using different national languages to agree on a reference clinical terminology or to standardise a detailed language independent biomedical ontology. Since 1990, they have developed an approach named categorial structure as a step standardising only the terminologies model structure. The methodology and the review of the different existing categorial structures are presented as a step towards increased interoperability between biomedical terminologies thanks to conformity to a minimum set of ontological requirements.

  8. Terminology representation guidelines for biomedical ontologies in the semantic web notations.

    Science.gov (United States)

    Tao, Cui; Pathak, Jyotishman; Solbrig, Harold R; Wei, Wei-Qi; Chute, Christopher G

    2013-02-01

    Terminologies and ontologies are increasingly prevalent in healthcare and biomedicine. However they suffer from inconsistent renderings, distribution formats, and syntax that make applications through common terminologies services challenging. To address the problem, one could posit a shared representation syntax, associated schema, and tags. We identified a set of commonly-used elements in biomedical ontologies and terminologies based on our experience with the Common Terminology Services 2 (CTS2) Specification as well as the Lexical Grid (LexGrid) project. We propose guidelines for precisely such a shared terminology model, and recommend tags assembled from SKOS, OWL, Dublin Core, RDF Schema, and DCMI meta-terms. We divide these guidelines into lexical information (e.g. synonyms, and definitions) and semantic information (e.g. hierarchies). The latter we distinguish for use by informal terminologies vs. formal ontologies. We then evaluate the guidelines with a spectrum of widely used terminologies and ontologies to examine how the lexical guidelines are implemented, and whether our proposed guidelines would enhance interoperability.

  9. Boolean versus ranked querying for biomedical systematic reviews

    Directory of Open Access Journals (Sweden)

    Cavedon Lawrence

    2010-10-01

    Full Text Available Abstract Background The process of constructing a systematic review, a document that compiles the published evidence pertaining to a specified medical topic, is intensely time-consuming, often taking a team of researchers over a year, with the identification of relevant published research comprising a substantial portion of the effort. The standard paradigm for this information-seeking task is to use Boolean search; however, this leaves the user(s the requirement of examining every returned result. Further, our experience is that effective Boolean queries for this specific task are extremely difficult to formulate and typically require multiple iterations of refinement before being finalized. Methods We explore the effectiveness of using ranked retrieval as compared to Boolean querying for the purpose of constructing a systematic review. We conduct a series of experiments involving ranked retrieval, using queries defined methodologically, in an effort to understand the practicalities of incorporating ranked retrieval into the systematic search task. Results Our results show that ranked retrieval by itself is not viable for this search task requiring high recall. However, we describe a refinement of the standard Boolean search process and show that ranking within a Boolean result set can improve the overall search performance by providing early indication of the quality of the results, thereby speeding up the iterative query-refinement process. Conclusions Outcomes of experiments suggest that an interactive query-development process using a hybrid ranked and Boolean retrieval system has the potential for significant time-savings over the current search process in the systematic reviewing.

  10. Discovering the role of morphology on the understanding of biomedical terminology by paramedical students.

    Science.gov (United States)

    Rais, Meriem; Grabar, Natalia

    2015-01-01

    The ability to learn specialized languages, such as biomedical language, requires not only specialized knowledge specific to this area, but also linguistic skills. We propose to study this hypothesis on the example of biomedical language as it is learned by advanced paramedical students in Algeria. Two particularities are to be addressed: linguistic specificities of biomedical terms and the fact that learning process is done in French while the native language of students is Arabic. We perform a questionnaire-based study through which students have to work on recognition and production of biomedical terms and of their components. Several difficulties are observed. We propose that terminology learning programs should strongly develop and rely on linguistic skills of students and on their morphological conscience.

  11. Exploitation of linguistic indicators for automatic weighting of synonyms induced within three biomedical terminologies.

    Science.gov (United States)

    Grabar, Natalia; Hamon, Thierry

    2010-01-01

    Acquisition and enrichment of lexical resources is an important research area for the computational linguistics. We propose a method for inducing a lexicon of synonyms and for its weighting in order to establish its reliability. The method is based on the analysis of syntactic structure of complex terms. We apply and evaluate the approach on three biomedical terminologies (MeSH, Snomed Int, Snomed CT). Between 7.7 and 33.6% of the induced synonyms are ambiguous and cooccur with other semantic relations. A virtual reference allows to validate 9 to 14% of the induced synonyms.

  12. Improving biomedical information retrieval by linear combinations of different query expansion techniques.

    Science.gov (United States)

    Abdulla, Ahmed AbdoAziz Ahmed; Lin, Hongfei; Xu, Bo; Banbhrani, Santosh Kumar

    2016-07-25

    Biomedical literature retrieval is becoming increasingly complex, and there is a fundamental need for advanced information retrieval systems. Information Retrieval (IR) programs scour unstructured materials such as text documents in large reserves of data that are usually stored on computers. IR is related to the representation, storage, and organization of information items, as well as to access. In IR one of the main problems is to determine which documents are relevant and which are not to the user's needs. Under the current regime, users cannot precisely construct queries in an accurate way to retrieve particular pieces of data from large reserves of data. Basic information retrieval systems are producing low-quality search results. In our proposed system for this paper we present a new technique to refine Information Retrieval searches to better represent the user's information need in order to enhance the performance of information retrieval by using different query expansion techniques and apply a linear combinations between them, where the combinations was linearly between two expansion results at one time. Query expansions expand the search query, for example, by finding synonyms and reweighting original terms. They provide significantly more focused, particularized search results than do basic search queries. The retrieval performance is measured by some variants of MAP (Mean Average Precision) and according to our experimental results, the combination of best results of query expansion is enhanced the retrieved documents and outperforms our baseline by 21.06 %, even it outperforms a previous study by 7.12 %. We propose several query expansion techniques and their combinations (linearly) to make user queries more cognizable to search engines and to produce higher-quality search results.

  13. Integration and Querying of Genomic and Proteomic Semantic Annotations for Biomedical Knowledge Extraction.

    Science.gov (United States)

    Masseroli, Marco; Canakoglu, Arif; Ceri, Stefano

    2016-01-01

    Understanding complex biological phenomena involves answering complex biomedical questions on multiple biomolecular information simultaneously, which are expressed through multiple genomic and proteomic semantic annotations scattered in many distributed and heterogeneous data sources; such heterogeneity and dispersion hamper the biologists' ability of asking global queries and performing global evaluations. To overcome this problem, we developed a software architecture to create and maintain a Genomic and Proteomic Knowledge Base (GPKB), which integrates several of the most relevant sources of such dispersed information (including Entrez Gene, UniProt, IntAct, Expasy Enzyme, GO, GOA, BioCyc, KEGG, Reactome, and OMIM). Our solution is general, as it uses a flexible, modular, and multilevel global data schema based on abstraction and generalization of integrated data features, and a set of automatic procedures for easing data integration and maintenance, also when the integrated data sources evolve in data content, structure, and number. These procedures also assure consistency, quality, and provenance tracking of all integrated data, and perform the semantic closure of the hierarchical relationships of the integrated biomedical ontologies. At http://www.bioinformatics.deib.polimi.it/GPKB/, a Web interface allows graphical easy composition of queries, although complex, on the knowledge base, supporting also semantic query expansion and comprehensive explorative search of the integrated data to better sustain biomedical knowledge extraction.

  14. The BioLexicon: a large-scale terminological resource for biomedical text mining

    Science.gov (United States)

    2011-01-01

    Background Due to the rapidly expanding body of biomedical literature, biologists require increasingly sophisticated and efficient systems to help them to search for relevant information. Such systems should account for the multiple written variants used to represent biomedical concepts, and allow the user to search for specific pieces of knowledge (or events) involving these concepts, e.g., protein-protein interactions. Such functionality requires access to detailed information about words used in the biomedical literature. Existing databases and ontologies often have a specific focus and are oriented towards human use. Consequently, biological knowledge is dispersed amongst many resources, which often do not attempt to account for the large and frequently changing set of variants that appear in the literature. Additionally, such resources typically do not provide information about how terms relate to each other in texts to describe events. Results This article provides an overview of the design, construction and evaluation of a large-scale lexical and conceptual resource for the biomedical domain, the BioLexicon. The resource can be exploited by text mining tools at several levels, e.g., part-of-speech tagging, recognition of biomedical entities, and the extraction of events in which they are involved. As such, the BioLexicon must account for real usage of words in biomedical texts. In particular, the BioLexicon gathers together different types of terms from several existing data resources into a single, unified repository, and augments them with new term variants automatically extracted from biomedical literature. Extraction of events is facilitated through the inclusion of biologically pertinent verbs (around which events are typically organized) together with information about typical patterns of grammatical and semantic behaviour, which are acquired from domain-specific texts. In order to foster interoperability, the BioLexicon is modelled using the Lexical

  15. The BioLexicon: a large-scale terminological resource for biomedical text mining

    Directory of Open Access Journals (Sweden)

    Thompson Paul

    2011-10-01

    Full Text Available Abstract Background Due to the rapidly expanding body of biomedical literature, biologists require increasingly sophisticated and efficient systems to help them to search for relevant information. Such systems should account for the multiple written variants used to represent biomedical concepts, and allow the user to search for specific pieces of knowledge (or events involving these concepts, e.g., protein-protein interactions. Such functionality requires access to detailed information about words used in the biomedical literature. Existing databases and ontologies often have a specific focus and are oriented towards human use. Consequently, biological knowledge is dispersed amongst many resources, which often do not attempt to account for the large and frequently changing set of variants that appear in the literature. Additionally, such resources typically do not provide information about how terms relate to each other in texts to describe events. Results This article provides an overview of the design, construction and evaluation of a large-scale lexical and conceptual resource for the biomedical domain, the BioLexicon. The resource can be exploited by text mining tools at several levels, e.g., part-of-speech tagging, recognition of biomedical entities, and the extraction of events in which they are involved. As such, the BioLexicon must account for real usage of words in biomedical texts. In particular, the BioLexicon gathers together different types of terms from several existing data resources into a single, unified repository, and augments them with new term variants automatically extracted from biomedical literature. Extraction of events is facilitated through the inclusion of biologically pertinent verbs (around which events are typically organized together with information about typical patterns of grammatical and semantic behaviour, which are acquired from domain-specific texts. In order to foster interoperability, the BioLexicon is

  16. BioPortal as a Dataset of Linked Biomedical Ontologies and Terminologies in RDF.

    Science.gov (United States)

    Salvadores, Manuel; Alexander, Paul R; Musen, Mark A; Noy, Natalya F

    2013-01-01

    BioPortal is a repository of biomedical ontologies-the largest such repository, with more than 300 ontologies to date. This set includes ontologies that were developed in OWL, OBO and other formats, as well as a large number of medical terminologies that the US National Library of Medicine distributes in its own proprietary format. We have published the RDF version of all these ontologies at http://sparql.bioontology.org. This dataset contains 190M triples, representing both metadata and content for the 300 ontologies. We use the metadata that the ontology authors provide and simple RDFS reasoning in order to provide dataset users with uniform access to key properties of the ontologies, such as lexical properties for the class names and provenance data. The dataset also contains 9.8M cross-ontology mappings of different types, generated both manually and automatically, which come with their own metadata.

  17. Analyzing rare diseases terms in biomedical terminologies Analizzare la terminologia biomedica sulle malattie rare

    Directory of Open Access Journals (Sweden)

    Erika Pasceri

    2012-06-01

    Full Text Available Rare disease patients too often face common problems, including the lack of access to correct diagnosis, lack of quality information on the disease, lack of scientific knowledge of the disease, inequities and difficulties in access to treatment and care. These things could be changed by implementing a comprehensive approach to rare diseases, increasing international cooperation in scientific research, by gaining and sharing scientific knowledge about and by developing tools for extracting and sharing knowledge. A significant aspect to analyze is the organization of knowledge in the biomedical field for the proper management and recovery of health information. For these purposes, the sources needed have been acquired from the Office of Rare Diseases Research, the National Organization of Rare Disorders and Orphanet, organizations that provide information to patients and physicians and facilitate the exchange of information among different actors involved in this field. The present paper shows the representation of rare diseases terms in biomedical terminologies such as MeSH, ICD-10, SNOMED CT and OMIM, leveraging the fact that these terminologies are integrated in the UMLS. At the first level, it was analyzed the overlap among sources and at a second level, the presence of rare diseases terms in target sources included in UMLS, working at the term and concept level. We found that MeSH has the best representation of rare diseases terms.Pazienti affetti da malattie rare molto spesso affrontano problemi comuni, tra cui la mancanza di accesso alla diagnosi corretta, la mancanza di informazioni di qualità sulla malattia, la mancanza di conoscenze scientifiche, e le difficoltà di accesso al trattamento e cura. Inadempienze e lacune che potrebbero essere colmate mediante l'attuazione di un approccio globale alle malattie rare, aumentando la cooperazione internazionale nella ricerca scientifica e lo sviluppo di strumenti per l'estrazione e la

  18. Discovering biomedical semantic relations in PubMed queries for information retrieval and database curation.

    Science.gov (United States)

    Huang, Chung-Chi; Lu, Zhiyong

    2016-01-01

    Identifying relevant papers from the literature is a common task in biocuration. Most current biomedical literature search systems primarily rely on matching user keywords. Semantic search, on the other hand, seeks to improve search accuracy by understanding the entities and contextual relations in user keywords. However, past research has mostly focused on semantically identifying biological entities (e.g. chemicals, diseases and genes) with little effort on discovering semantic relations. In this work, we aim to discover biomedical semantic relations in PubMed queries in an automated and unsupervised fashion. Specifically, we focus on extracting and understanding the contextual information (or context patterns) that is used by PubMed users to represent semantic relations between entities such as 'CHEMICAL-1 compared to CHEMICAL-2' With the advances in automatic named entity recognition, we first tag entities in PubMed queries and then use tagged entities as knowledge to recognize pattern semantics. More specifically, we transform PubMed queries into context patterns involving participating entities, which are subsequently projected to latent topics via latent semantic analysis (LSA) to avoid the data sparseness and specificity issues. Finally, we mine semantically similar contextual patterns or semantic relations based on LSA topic distributions. Our two separate evaluation experiments of chemical-chemical (CC) and chemical-disease (CD) relations show that the proposed approach significantly outperforms a baseline method, which simply measures pattern semantics by similarity in participating entities. The highest performance achieved by our approach is nearly 0.9 and 0.85 respectively for the CC and CD task when compared against the ground truth in terms of normalized discounted cumulative gain (nDCG), a standard measure of ranking quality. These results suggest that our approach can effectively identify and return related semantic patterns in a ranked order

  19. Learning Terminology in Order to Become an Active Agent in the Development of Basque Biomedical Registers

    Science.gov (United States)

    Zabala Unzalu, Igone; San Martin Egia, Itziar; Lersundi Ayestaran, Mikel

    2016-01-01

    The aim of this article is to describe some theoretical and methodological bases underpinning the design of the course Health Communication in Basque (HCB) at the University of the Basque Country (UPV/EHU). Based on some relevant theoretical tenets of the socioterminologic and communicative approaches to Terminology, the authors assume that…

  20. Data federation in the Biomedical Informatics Research Network: tools for semantic annotation and query of distributed multiscale brain data.

    Science.gov (United States)

    Bug, William; Astahkov, Vadim; Boline, Jyl; Fennema-Notestine, Christine; Grethe, Jeffrey S; Gupta, Amarnath; Kennedy, David N; Rubin, Daniel L; Sanders, Brian; Turner, Jessica A; Martone, Maryann E

    2008-11-06

    The broadly defined mission of the Biomedical Informatics Research Network (BIRN, www.nbirn.net) is to better understand the causes human disease and the specific ways in which animal models inform that understanding. To construct the community-wide infrastructure for gathering, organizing and managing this knowledge, BIRN is developing a federated architecture for linking multiple databases across sites contributing data and knowledge. Navigating across these distributed data sources requires a shared semantic scheme and supporting software framework to actively link the disparate repositories. At the core of this knowledge organization is BIRNLex, a formally-represented ontology facilitating data exchange. Source curators enable database interoperability by mapping their schema and data to BIRNLex semantic classes thereby providing a means to cast BIRNLex-based queries against specific data sources in the federation. We will illustrate use of the source registration, term mapping, and query tools.

  1. Cluster-Based Query Expansion Using Language Modeling for Biomedical Literature Retrieval

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    Xu, Xuheng

    2011-01-01

    The tremendously huge volume of biomedical literature, scientists' specific information needs, long terms of multiples words, and fundamental problems of synonym and polysemy have been challenging issues facing the biomedical information retrieval community researchers. Search engines have significantly improved the efficiency and effectiveness of…

  2. B.E.A.R. GeneInfo: A tool for identifying gene-related biomedical publications through user modifiable queries

    Directory of Open Access Journals (Sweden)

    Zhou Guohui

    2004-04-01

    Full Text Available Abstract Background Once specific genes are identified through high throughput genomics technologies there is a need to sort the final gene list to a manageable size for validation studies. The triaging and sorting of genes often relies on the use of supplemental information related to gene structure, metabolic pathways, and chromosomal location. Yet in disease states where the genes may not have identifiable structural elements, poorly defined metabolic pathways, or limited chromosomal data, flexible systems for obtaining additional data are necessary. In these situations having a tool for searching the biomedical literature using the list of identified genes while simultaneously defining additional search terms would be useful. Results We have built a tool, BEAR GeneInfo, that allows flexible searches based on the investigators knowledge of the biological process, thus allowing for data mining that is specific to the scientist's strengths and interests. This tool allows a user to upload a series of GenBank accession numbers, Unigene Ids, Locuslink Ids, or gene names. BEAR GeneInfo takes these IDs and identifies the associated gene names, and uses the lists of gene names to query PubMed. The investigator can add additional modifying search terms to the query. The subsequent output provides a list of publications, along with the associated reference hyperlinks, for reviewing the identified articles for relevance and interest. An example of the use of this tool in the study of human prostate cancer cells treated with Selenium is presented. Conclusions This tool can be used to further define a list of genes that have been identified through genomic or genetic studies. Through the use of targeted searches with additional search terms the investigator can limit the list to genes that match their specific research interests or needs. The tool is freely available on the web at http://prostategenomics.org1, and the authors will provide scripts and

  3. (Terminology standardization)

    Energy Technology Data Exchange (ETDEWEB)

    Strehlow, R.A.

    1990-10-19

    Terminological requirements in information management was but one of the principal themes of the 2nd Congress on Terminology and Knowledge Engineering. The traveler represented the American Society for Testing and Materials' Committee on Terminology, of which he is the Chair. The traveler's invited workshop emphasized terminology standardization requirements in databases of material properties as well as practical terminology standardizing methods. The congress included six workshops in addition to approximately 82 lectures and papers from terminologists, artificial intelligence practitioners, and subject specialists from 18 countries. There were approximately 292 registrants from 33 countries who participated in the congress. The congress topics were broad. Examples were the increasing use of International Standards Organization (ISO) Standards in legislated systems such as the USSR Automated Data Bank of Standardized Terminology, the enhanced Physics Training Program based on terminology standardization in Physics in the Chinese province of Inner Mongolia, and the technical concept dictionary being developed at the Japan Electronic Dictionary Research Institute, which is considered to be the key to advanced artificial intelligence applications. The more usual roles of terminology work in the areas of machine translation. indexing protocols, knowledge theory, and data transfer in several subject specialties were also addressed, along with numerous special language terminology areas.

  4. Pediatric Terminology

    Science.gov (United States)

    The National Institute of Child Health and Human Development (NICHD) is working with NCI Enterprise Vocabulary Services (EVS) to provide standardized terminology for coding pediatric clinical trials and other resea

  5. Using the abstraction network in complement to description logics for quality assurance in biomedical terminologies - a case study in SNOMED CT.

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    Wei, Duo; Bodenreider, Olivier

    2010-01-01

    To investigate errors identified in SNOMED CT by human reviewers with help from the Abstraction Network methodology and examine why they had escaped detection by the Description Logic (DL) classifier. Case study; Two examples of errors are presented in detail (one missing IS-A relation and one duplicate concept). After correction, SNOMED CT is reclassified to ensure that no new inconsistency was introduced. DL-based auditing techniques built in terminology development environments ensure the logical consistency of the terminology. However, complementary approaches are needed for identifying and addressing other types of errors.

  6. Superfund Query

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    U.S. Environmental Protection Agency — The Superfund Query allows users to retrieve data from the Comprehensive Environmental Response, Compensation, and Liability Information System (CERCLIS) database.

  7. Development of a Pediatric Adverse Events Terminology

    Science.gov (United States)

    Gipson, Debbie S.; Kirkendall, Eric S.; Gumbs-Petty, Brenda; Quinn, Theresa; Steen, A.; Hicks, Amanda; McMahon, Ann; Nicholas, Savian; Zhao-Wong, Anna; Taylor-Zapata, Perdita; Turner, Mark; Herreshoff, Emily; Jones, Charlotte; Davis, Jonathan M.; Haber, Margaret; Hirschfeld, Steven

    2017-01-01

    In 2009, the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) established the Pediatric Terminology Harmonization Initiative to establish a core library of terms to facilitate the acquisition and sharing of knowledge between pediatric clinical research, practice, and safety reporting. A coalition of partners established a Pediatric Terminology Adverse Event Working Group in 2013 to develop a specific terminology relevant to international pediatric adverse event (AE) reporting. Pediatric specialists with backgrounds in clinical care, research, safety reporting, or informatics, supported by biomedical terminology experts from the National Cancer Institute’s Enterprise Vocabulary Services participated. The multinational group developed a working definition of AEs and reviewed concepts (terms, synonyms, and definitions) from 16 pediatric clinical domains. The resulting AE terminology contains >1000 pediatric diseases, disorders, or clinical findings. The terms were tested for proof of concept use in 2 different settings: hospital readmissions and the NICU. The advantages of the AE terminology include ease of adoption due to integration with well-established and internationally accepted biomedical terminologies, a uniquely temporal focus on pediatric health and disease from conception through adolescence, and terms that could be used in both well- and underresourced environments. The AE terminology is available for use without restriction through the National Cancer Institute’s Enterprise Vocabulary Services and is fully compatible with, and represented in, the Medical Dictionary for Regulatory Activities. The terminology is intended to mature with use, user feedback, and optimization. PMID:28028203

  8. Development of a Pediatric Adverse Events Terminology.

    Science.gov (United States)

    Gipson, Debbie S; Kirkendall, Eric S; Gumbs-Petty, Brenda; Quinn, Theresa; Steen, A; Hicks, Amanda; McMahon, Ann; Nicholas, Savian; Zhao-Wong, Anna; Taylor-Zapata, Perdita; Turner, Mark; Herreshoff, Emily; Jones, Charlotte; Davis, Jonathan M; Haber, Margaret; Hirschfeld, Steven

    2017-01-01

    In 2009, the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) established the Pediatric Terminology Harmonization Initiative to establish a core library of terms to facilitate the acquisition and sharing of knowledge between pediatric clinical research, practice, and safety reporting. A coalition of partners established a Pediatric Terminology Adverse Event Working Group in 2013 to develop a specific terminology relevant to international pediatric adverse event (AE) reporting. Pediatric specialists with backgrounds in clinical care, research, safety reporting, or informatics, supported by biomedical terminology experts from the National Cancer Institute's Enterprise Vocabulary Services participated. The multinational group developed a working definition of AEs and reviewed concepts (terms, synonyms, and definitions) from 16 pediatric clinical domains. The resulting AE terminology contains >1000 pediatric diseases, disorders, or clinical findings. The terms were tested for proof of concept use in 2 different settings: hospital readmissions and the NICU. The advantages of the AE terminology include ease of adoption due to integration with well-established and internationally accepted biomedical terminologies, a uniquely temporal focus on pediatric health and disease from conception through adolescence, and terms that could be used in both well- and underresourced environments. The AE terminology is available for use without restriction through the National Cancer Institute's Enterprise Vocabulary Services and is fully compatible with, and represented in, the Medical Dictionary for Regulatory Activities. The terminology is intended to mature with use, user feedback, and optimization.

  9. Query responses

    Directory of Open Access Journals (Sweden)

    Paweł Łupkowski

    2017-05-01

    Full Text Available In this article we consider the phenomenon of answering a query with a query. Although such answers are common, no large scale, corpus-based characterization exists, with the exception of clarification requests. After briefly reviewing different theoretical approaches on this subject, we present a corpus study of query responses in the British National Corpus and develop a taxonomy for query responses. We point at a variety of response categories that have not been formalized in previous dialogue work, particularly those relevant to adversarial interaction. We show that different response categories have significantly different rates of subsequent answer provision. We provide a formal analysis of the response categories in the framework of KoS.

  10. MEDIATION TERMINOLOGY AS A SECONDARY TERMINOLOGICAL SYSTEM

    Directory of Open Access Journals (Sweden)

    Vyushkina, E.G.

    2017-03-01

    Full Text Available The article deals with the problem of formation of secondary terminological system of legal mediation. Secondary terminological systems are relatively new phenomena of the language of science, characterized by the formation of special subsystems of terms that have specific linguistic characteristics. In the composition of the secondary terminological system it is possible to identify not only the terms of the underlying science, but also units drawn from other terminological systems and terms of a mixed type, however, the nature of manifestations of the three types of units is specific in each of the secondary terminological system, including the mediation terminology.

  11. Terminology, a Translational Discipline.

    Science.gov (United States)

    Ahrens, Helga

    1994-01-01

    Discusses the importance of qualified terminology and its implications for terminological activity. Argues that students have to learn how to organize their terminological activity. Suggests that translation is a special kind of intercultural communication and is an indispensable part of translational action. Argues that terminology be examined…

  12. ConQuR-Bio: Consensus Ranking with Query Reformulation for Biological Data

    OpenAIRE

    2014-01-01

    International audience; This paper introduces ConQuR-Bio which aims at assisting scientists when they query public biological databases. Various reformu-lations of the user query are generated using medical terminologies. Such alternative reformulations are then used to rank the query results using a new consensus ranking strategy. The originality of our approach thus lies in using consensus ranking techniques within the context of query reformulation. The ConQuR-Bio system is able to query t...

  13. Approximate dictionary queries

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Gasieniec, Leszek

    1996-01-01

    Given a set of n binary strings of length m each. We consider the problem of answering d-queries. Given a binary query string of length m, a d-query is to report if there exists a string in the set within Hamming distance d of . We present a data structure of size O(nm) supporting 1-queries in ti...

  14. Managing and querying whole slide images

    Science.gov (United States)

    Wang, Fusheng; Oh, Tae W.; Vergara-Niedermayr, Cristobal; Kurc, Tahsin; Saltz, Joel

    2012-02-01

    High-resolution pathology images provide rich information about the morphological and functional characteristics of biological systems, and are transforming the field of pathology into a new era. To facilitate the use of digital pathology imaging for biomedical research and clinical diagnosis, it is essential to manage and query both whole slide images (WSI) and analytical results generated from images, such as annotations made by humans and computed features and classifications made by computer algorithms. There are unique requirements on modeling, managing and querying whole slide images, including compatibility with standards, scalability, support of image queries at multiple granularities, and support of integrated queries between images and derived results from the images. In this paper, we present our work on developing the Pathology Image Database System (PIDB), which is a standard oriented image database to support retrieval of images, tiles, regions and analytical results, image visualization and experiment management through a unified interface and architecture. The system is deployed for managing and querying whole slide images for In Silico brain tumor studies at Emory University. PIDB is generic and open source, and can be easily used to support other biomedical research projects. It has the potential to be integrated into a Picture Archiving and Communications System (PACS) with powerful query capabilities to support pathology imaging.

  15. A cross-lingual framework for monolingual biomedical information retrieval

    NARCIS (Netherlands)

    Trieschnigg, D.; Hiemstra, D.; Jong, F. de; Kraaij, W.

    2010-01-01

    An important challenge for biomedical information retrieval (IR) is dealing with the complex, inconsistent and ambiguous biomedical terminology. Frequently, a concept-based representation defined in terms of a domain-specific terminological resource is employed to deal with this challenge. In this p

  16. Optimizing Temporal Queries

    DEFF Research Database (Denmark)

    Toman, David; Bowman, Ivan Thomas

    2003-01-01

    Recent research in the area of temporal databases has proposed a number of query languages that vary in their expressive power and the semantics they provide to users. These query languages represent a spectrum of solutions to the tension between clean semantics and efficient evaluation. Often......, these query languages are implemented by translating temporal queries into standard relational queries. However, the compiled queries are often quite cumbersome and expensive to execute even using state-of-the-art relational products. This paper presents an optimization technique that produces more efficient...... translated SQL queries by taking into account the properties of the encoding used for temporal attributes. For concreteness, this translation technique is presented in the context of SQL/TP; however, these techniques are also applicable to other temporal query languages....

  17. Optimizing Temporal Queries

    DEFF Research Database (Denmark)

    Toman, David; Bowman, Ivan Thomas

    2003-01-01

    translated SQL queries by taking into account the properties of the encoding used for temporal attributes. For concreteness, this translation technique is presented in the context of SQL/TP; however, these techniques are also applicable to other temporal query languages......., these query languages are implemented by translating temporal queries into standard relational queries. However, the compiled queries are often quite cumbersome and expensive to execute even using state-of-the-art relational products. This paper presents an optimization technique that produces more efficient......Recent research in the area of temporal databases has proposed a number of query languages that vary in their expressive power and the semantics they provide to users. These query languages represent a spectrum of solutions to the tension between clean semantics and efficient evaluation. Often...

  18. Efficient Query Rewrite for Structured Web Queries

    CERN Document Server

    Gollapudi, Sreenivas; Ntoulas, Alexandros; Paparizos, Stelios

    2011-01-01

    Web search engines and specialized online verticals are increasingly incorporating results from structured data sources to answer semantically rich user queries. For example, the query \\WebQuery{Samsung 50 inch led tv} can be answered using information from a table of television data. However, the users are not domain experts and quite often enter values that do not match precisely the underlying data. Samsung makes 46- or 55- inch led tvs, but not 50-inch ones. So a literal execution of the above mentioned query will return zero results. For optimal user experience, a search engine would prefer to return at least a minimum number of results as close to the original query as possible. Furthermore, due to typical fast retrieval speeds in web-search, a search engine query execution is time-bound. In this paper, we address these challenges by proposing algorithms that rewrite the user query in a principled manner, surfacing at least the required number of results while satisfying the low-latency constraint. We f...

  19. E-terminology*

    African Journals Online (AJOL)

    rbr

    worldwide market for terminological products is gradually expanding. There is an ever .... The Translator's Workbench gives instant and flexible access to previously translated ..... their screen-size, input capabilities and bandwidth are limited.

  20. Merge of terminological resources

    DEFF Research Database (Denmark)

    Henriksen, Lina; Braasch, Anna

    2012-01-01

    In our globalized world, the amount of cross-national communication increases rapidly, which also calls for easy access to multi-lingual high quality terminological resources. Sharing of terminology resources is currently becoming common practice, and efficient strategies for integration...... – or merging – of terminology resources are strongly needed. This paper discusses prerequisites for successful merging with the focus on identification of candidate duplicates of a subject domain found in the resources to be merged, and it describes automatic merging strategies to be applied to such duplicates...... in electronic terminology resources. Further, some perspectives of manual, supplementary assessment methods supporting the automatic procedures are sketched. Our considerations are primarily based on experience gained in the IATE and EuroTermBank projects, as merging was a much discussed issue in both projects....

  1. Learning semantic query suggestions

    NARCIS (Netherlands)

    E. Meij; M. Bron; L. Hollink; B. Huurnink; M. de Rijke

    2009-01-01

    An important application of semantic web technology is recognizing human-defined concepts in text. Query transformation is a strategy often used in search engines to derive queries that are able to return more useful search results than the original query and most popular search engines provide faci

  2. Terminologi og oversigtsplaner

    DEFF Research Database (Denmark)

    2014-01-01

    Key to terminology used in the Aggersborg book relating to features of the rural settlement and the circular fortress, and information on excavation documentation and on the plans published in the book......Key to terminology used in the Aggersborg book relating to features of the rural settlement and the circular fortress, and information on excavation documentation and on the plans published in the book...

  3. Collective spatial keyword querying

    DEFF Research Database (Denmark)

    Cao, Xin; Cong, Gao; Jensen, Christian S.;

    2011-01-01

    With the proliferation of geo-positioning and geo-tagging, spatial web objects that possess both a geographical location and a textual description are gaining in prevalence, and spatial keyword queries that exploit both location and textual description are gaining in prominence. However......, the queries studied so far generally focus on finding individual objects that each satisfy a query rather than finding groups of objects where the objects in a group collectively satisfy a query. We define the problem of retrieving a group of spatial web objects such that the group's keywords cover the query...

  4. Terminology in the Making

    DEFF Research Database (Denmark)

    Ørum, Tania

    2017-01-01

    Pop art seems to be a more prevalent term in Sweden, whereas in Denmark the dominant term was minimalism. However, some of the problems of developing a terminology and agreeing on a description of the new art movements in the 1960s seem to exist in the American context as well.......Pop art seems to be a more prevalent term in Sweden, whereas in Denmark the dominant term was minimalism. However, some of the problems of developing a terminology and agreeing on a description of the new art movements in the 1960s seem to exist in the American context as well....

  5. Morphing Terminology Study

    Energy Technology Data Exchange (ETDEWEB)

    Rose, Stuart J.; Brockman, Fred J.; Hart, Michelle L.; Engel, David W.; Valentine, Nancy B.; Calapristi, Augustin J.

    2010-06-28

    This study investigates methods of automatically identifying and characterizing significant transitions in term usage over time. Within scientific literature, the occurrence of terms reflects the use of technologies and techniques as well as the study of specific species and materials. Transitions in terminology usage may be a result of vocabulary standardization or specialization in which terms are replaced with their shorter form. They may also be a result of new applications, combinations, alternatives, or interests that result in the appearance of new or existing terminology in unexpected contexts.

  6. Query Language for Complex Similarity Queries

    CERN Document Server

    Budikova, Petra; Zezula, Pavel

    2012-01-01

    For complex data types such as multimedia, traditional data management methods are not suitable. Instead of attribute matching approaches, access methods based on object similarity are becoming popular. Recently, this resulted in an intensive research of indexing and searching methods for the similarity-based retrieval. Nowadays, many efficient methods are already available, but using them to build an actual search system still requires specialists that tune the methods and build the system manually. Several attempts have already been made to provide a more convenient high-level interface in a form of query languages for such systems, but these are limited to support only basic similarity queries. In this paper, we propose a new language that allows to formulate content-based queries in a flexible way, taking into account the functionality offered by a particular search engine in use. To ensure this, the language is based on a general data model with an abstract set of operations. Consequently, the language s...

  7. Seri Kinship Terminology.

    Science.gov (United States)

    Moser, Mary B.; Marlett, Stephen A.

    The Seri language contains over 50 kinship terms and represents one of the most highly elaborated kinship systems described to date. This paper discusses Seri kinship terminology and centers around, but is not limited to, the set of obligatory possessed noun stems that are inflected with the following possessive prefixes": "hi-,""ma-," and "a-."…

  8. Indexing for summary queries

    DEFF Research Database (Denmark)

    Yi, Ke; Wang, Lu; Wei, Zhewei

    2014-01-01

    ), of a particular attribute of these records. Aggregation queries are especially useful in business intelligence and data analysis applications where users are interested not in the actual records, but some statistics of them. They can also be executed much more efficiently than reporting queries, by embedding...

  9. Query recommendation for children

    NARCIS (Netherlands)

    Duarte Torres, Sergio; Hiemstra, Djoerd; Weber, Ingmar; Serdyukov, Pavel

    2012-01-01

    One of the biggest problems that children experience while searching the web occurs during the query formulation process. Children have been found to struggle formulating queries based on keywords given their limited vocabulary and their difficulty to choose the right keywords. In this work we propo

  10. WATERS Expert Query Tool

    Data.gov (United States)

    U.S. Environmental Protection Agency — The Expert Query Tool is a web-based reporting tool using the EPA’s WATERS database.There are just three steps to using Expert Query:1. View Selection – Choose what...

  11. Mastering jQuery

    CERN Document Server

    Libby, Alex

    2015-01-01

    If you are a developer who is already familiar with using jQuery and wants to push your skill set further, then this book is for you. The book assumes an intermediate knowledge level of jQuery, JavaScript, HTML5, and CSS.

  12. Indexing for summary queries

    DEFF Research Database (Denmark)

    Yi, Ke; Wang, Lu; Wei, Zhewei

    2014-01-01

    ), of a particular attribute of these records. Aggregation queries are especially useful in business intelligence and data analysis applications where users are interested not in the actual records, but some statistics of them. They can also be executed much more efficiently than reporting queries, by embedding...

  13. The National Center for Biomedical Ontology.

    Science.gov (United States)

    Musen, Mark A; Noy, Natalya F; Shah, Nigam H; Whetzel, Patricia L; Chute, Christopher G; Story, Margaret-Anne; Smith, Barry

    2012-01-01

    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and terminologies in biomedicine. The centerpiece of the National Center for Biomedical Ontology is a web-based resource known as BioPortal. BioPortal makes available for research in computationally useful forms more than 270 of the world's biomedical ontologies and terminologies, and supports a wide range of web services that enable investigators to use the ontologies to annotate and retrieve data, to generate value sets and special-purpose lexicons, and to perform advanced analytics on a wide range of biomedical data.

  14. The National Center for Biomedical Ontology

    Science.gov (United States)

    Noy, Natalya F; Shah, Nigam H; Whetzel, Patricia L; Chute, Christopher G; Story, Margaret-Anne; Smith, Barry

    2011-01-01

    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and terminologies in biomedicine. The centerpiece of the National Center for Biomedical Ontology is a web-based resource known as BioPortal. BioPortal makes available for research in computationally useful forms more than 270 of the world's biomedical ontologies and terminologies, and supports a wide range of web services that enable investigators to use the ontologies to annotate and retrieve data, to generate value sets and special-purpose lexicons, and to perform advanced analytics on a wide range of biomedical data. PMID:22081220

  15. Declarative Visualization Queries

    Science.gov (United States)

    Pinheiro da Silva, P.; Del Rio, N.; Leptoukh, G. G.

    2011-12-01

    In an ideal interaction with machines, scientists may prefer to write declarative queries saying "what" they want from a machine than to write code stating "how" the machine is going to address the user request. For example, in relational database, users have long relied on specifying queries using Structured Query Language (SQL), a declarative language to request data results from a database management system. In the context of visualizations, we see that users are still writing code based on complex visualization toolkit APIs. With the goal of improving the scientists' experience of using visualization technology, we have applied this query-answering pattern to a visualization setting, where scientists specify what visualizations they want generated using a declarative SQL-like notation. A knowledge enhanced management system ingests the query and knows the following: (1) know how to translate the query into visualization pipelines; and (2) how to execute the visualization pipelines to generate the requested visualization. We define visualization queries as declarative requests for visualizations specified in an SQL like language. Visualization queries specify what category of visualization to generate (e.g., volumes, contours, surfaces) as well as associated display attributes (e.g., color and opacity), without any regards for implementation, thus allowing scientists to remain partially unaware of a wide range of visualization toolkit (e.g., Generic Mapping Tools and Visualization Toolkit) specific implementation details. Implementation details are only a concern for our knowledge-based visualization management system, which uses both the information specified in the query and knowledge about visualization toolkit functions to construct visualization pipelines. Knowledge about the use of visualization toolkits includes what data formats the toolkit operates on, what formats they output, and what views they can generate. Visualization knowledge, which is not

  16. An automated approach to mapping external terminologies to the UMLS.

    Science.gov (United States)

    Taboada, María; Lalín, Rosario; Martínez, Diego

    2009-06-01

    Nowadays, providing interoperability between different biomedical terminologies is a critical issue for efficient information sharing. One problem making interoperability difficult is the lack of automated methods simplifying the mapping process. In this study, we propose an automated approach to mapping external terminologies to the Unified Medical Language System (UMLS). Our approach applies a sequential combination of two basic matching methods classically used in ontology matching. First, a lexical technique identifies similar strings between the external terminology and the UMLS. Second, a structure-based technique validates, in part, the lexical alignment by computing paths to top-level concepts and checking the compatibility of these top-level concepts across the external terminology and the UMLS. The method was applied to the mapping of the large-scale biomedical thesaurus EMTREE to the complete UMLS Metathesaurus. In total, 47.9% coverage of EMTREE terms was reached, leading to 80% coverage of EMTREE concepts. Our method has revealed a high compatibility in 6 out of 15 top-level categories across terminologies. The validation of lexical mappings ranges over 75.8% of the total lexical alignment. Overall, the method rules out a total of 6927 (7.9%) lexical mappings, with a global precision of 78%.

  17. Orthogonal Query Expansion

    CERN Document Server

    Ackerman, Margareta; Lopez-Ortiz, Alejandro

    2011-01-01

    Over the last fifteen years, web searching has seen tremendous improvements. Starting from a nearly random collection of matching pages in 1995, today, search engines tend to satisfy the user's informational need on well-formulated queries. One of the main remaining challenges is to satisfy the users' needs when they provide a poorly formulated query. When the pages matching the user's original keywords are judged to be unsatisfactory, query expansion techniques are used to alter the result set. These techniques find keywords that are similar to the keywords given by the user, which are then appended to the original query leading to a perturbation of the result set. However, when the original query is sufficiently ill-posed, the user's informational need is best met using entirely different keywords, and a small perturbation of the original result set is bound to fail. We propose a novel approach that is not based on the keywords of the original query. We intentionally seek out orthogonal queries, which are r...

  18. Moving Spatial Keyword Queries

    DEFF Research Database (Denmark)

    Wu, Dingming; Yiu, Man Lung; Jensen, Christian S.

    2013-01-01

    Web users and content are increasingly being geo-positioned. This development gives prominence to spatial keyword queries, which involve both the locations and textual descriptions of content. We study the efficient processing of continuously moving top-k spatial keyword (MkSK) queries over spatial...... text data. State-of-the-art solutions for moving queries employ safe zones that guarantee the validity of reported results as long as the user remains within the safe zone associated with a result. However, existing safe-zone methods focus solely on spatial locations and ignore text relevancy. We...

  19. jQuery cookbook

    CERN Document Server

    2010-01-01

    jQuery simplifies building rich, interactive web frontends. Getting started with this JavaScript library is easy, but it can take years to fully realize its breadth and depth; this cookbook shortens the learning curve considerably. With these recipes, you'll learn patterns and practices from 19 leading developers who use jQuery for everything from integrating simple components into websites and applications to developing complex, high-performance user interfaces. Ideal for newcomers and JavaScript veterans alike, jQuery Cookbook starts with the basics and then moves to practical use cases w

  20. Range-Clustering Queries

    OpenAIRE

    Abrahamsen, Mikkel; de Berg, Mark; Buchin, Kevin; Mehr, Mehran; Mehrabi, Ali D.

    2017-01-01

    In a geometric $k$-clustering problem the goal is to partition a set of points in $\\mathbb{R}^d$ into $k$ subsets such that a certain cost function of the clustering is minimized. We present data structures for orthogonal range-clustering queries on a point set $S$: given a query box $Q$ and an integer $k>2$, compute an optimal $k$-clustering for $S\\setminus Q$. We obtain the following results. We present a general method to compute a $(1+\\epsilon)$-approximation to a range-clustering query, ...

  1. Benchmarking Query Execution Robustness

    Science.gov (United States)

    Wiener, Janet L.; Kuno, Harumi; Graefe, Goetz

    Benchmarks that focus on running queries on a well-tuned database system ignore a long-standing problem: adverse runtime conditions can cause database system performance to vary widely and unexpectedly. When the query execution engine does not exhibit resilience to these adverse conditions, addressing the resultant performance problems can contribute significantly to the total cost of ownership for a database system in over-provisioning, lost efficiency, and increased human administrative costs. For example, focused human effort may be needed to manually invoke workload management actions or fine-tune the optimization of specific queries.

  2. Query log analysis of an electronic health record search engine.

    Science.gov (United States)

    Yang, Lei; Mei, Qiaozhu; Zheng, Kai; Hanauer, David A

    2011-01-01

    We analyzed a longitudinal collection of query logs of a full-text search engine designed to facilitate information retrieval in electronic health records (EHR). The collection, 202,905 queries and 35,928 user sessions recorded over a course of 4 years, represents the information-seeking behavior of 533 medical professionals, including frontline practitioners, coding personnel, patient safety officers, and biomedical researchers for patient data stored in EHR systems. In this paper, we present descriptive statistics of the queries, a categorization of information needs manifested through the queries, as well as temporal patterns of the users' information-seeking behavior. The results suggest that information needs in medical domain are substantially more sophisticated than those that general-purpose web search engines need to accommodate. Therefore, we envision there exists a significant challenge, along with significant opportunities, to provide intelligent query recommendations to facilitate information retrieval in EHR.

  3. Localized Geometric Query Problems

    CERN Document Server

    Augustine, John; Maheshwari, Anil; Nandy, Subhas C; Roy, Sasanka; Sarvattomananda, Swami

    2011-01-01

    A new class of geometric query problems are studied in this paper. We are required to preprocess a set of geometric objects $P$ in the plane, so that for any arbitrary query point $q$, the largest circle that contains $q$ but does not contain any member of $P$, can be reported efficiently. The geometric sets that we consider are point sets and boundaries of simple polygons.

  4. Querying JSON Streams

    OpenAIRE

    Bo, Yang

    2010-01-01

    A data stream management system (DSMS) is similar to a database management system (DBMS) but can search data directly in on-line streams. Using its mediator-wrapper approach, the extensible database system, Amos II, allows different kinds of distributed data resource to be queried. It has been extended with a stream datatype to query possibly infinite streams, which provides DSMS functionality. Nowadays, more and more web applications start to offer their services in JSON format which is a te...

  5. Inverse Queries For Multidimensional Spaces

    CERN Document Server

    Bernecker, Thomas; Kriegel, Hans-Peter; Mamoulis, Nikos; Renz, Matthias; Zhang, Shiming; Züfle, Andreas

    2011-01-01

    Traditional spatial queries return, for a given query object $q$, all database objects that satisfy a given predicate, such as epsilon range and $k$-nearest neighbors. This paper defines and studies {\\em inverse} spatial queries, which, given a subset of database objects $Q$ and a query predicate, return all objects which, if used as query objects with the predicate, contain $Q$ in their result. We first show a straightforward solution for answering inverse spatial queries for any query predicate. Then, we propose a filter-and-refinement framework that can be used to improve efficiency. We show how to apply this framework on a variety of inverse queries, using appropriate space pruning strategies. In particular, we propose solutions for inverse epsilon range queries, inverse $k$-nearest neighbor queries, and inverse skyline queries. Our experiments show that our framework is significantly more efficient than naive approaches.

  6. A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm.

    NARCIS (Netherlands)

    Ethier, J.F.; Dameron, O.; Curcin, V.; McGilchrist, M.M.; Verheij, R.A.; Arvanitis, T.N.; Taweel, A.; Delaney, B.C.; Burgun, A.

    2013-01-01

    Objective: Biomedical research increasingly relies on the integration of information from multiple heterogeneous data sources. Despite the fact that structural and terminological aspects of interoperability are interdependent and rely on a common set of requirements, current efforts typically addres

  7. Terminologia revisitada Terminology revisited

    Directory of Open Access Journals (Sweden)

    Maria da Graça KRIEGER

    2000-01-01

    Full Text Available Este artigo busca situar o panorama atual das reflexões críticas sobre os estudos teóricos e aplicados de terminologia. Caracteriza-se a passagem do paradigma normativo, fundador da teoria clássica da terminologia, para o enfoque pragmático-comunicacional das linguagens especializadas, identificando-se os principais pontos discutidos pelo percurso revisionista. Destacam-se ainda os fundamentos e as proposições para o estabelecimento de uma nova teoria da terminologia articulada à luz do funcionamento da linguagem. Com isso, abre-se a perspectiva para o tratamento textual e discursivo dos termos técnico-científicos, com importantes implicações para a produção de obras de referência temáticas.The purpose of this paper is to investigate the current scenery of critical reflexions on applied and theoretical researches in Terminology. In this respect, the change from the normative paradigm, considered to be the very founder of the classic terminology, to the pragmatic - communicative approach of specialized languages is then caracterized, and also the main items pointed out by the revisionary aspects are identified. At the same time, the assumptions and proppositions to the establishment of a "new" terminology theory in the light of the functioning of language have been discussed. All these questionings lead to the possibility of a textual and discoursive treatment of the techno-scientific terms, with relevant implications to the production of thematic reference works.

  8. Review of Welding Terminology

    Directory of Open Access Journals (Sweden)

    Angelika Petrėtienė

    2011-04-01

    Full Text Available The paper discusses welding terms in accordance with the Lithuanian standard LST EN 1792 „Welding. The multilingual list of welding terms and similar processes”, „The Russian–Lithuanian dictionary of the terms of mechanical engineering technology and welding“ and the examples from postgraduates‘ final works. It analyses the infringement of lexical, word-building and morphological rules. First-year students should already be familiar with the standardized terms of their speciality. More active propagation of the terms should help to avoid terminology mistakes in various scientific spheres.

  9. Querying phenotype-genotype relationships on patient datasets using semantic web technology: the example of Cerebrotendinous xanthomatosis.

    Science.gov (United States)

    Taboada, María; Martínez, Diego; Pilo, Belén; Jiménez-Escrig, Adriano; Robinson, Peter N; Sobrido, María J

    2012-07-31

    Semantic Web technology can considerably catalyze translational genetics and genomics research in medicine, where the interchange of information between basic research and clinical levels becomes crucial. This exchange involves mapping abstract phenotype descriptions from research resources, such as knowledge databases and catalogs, to unstructured datasets produced through experimental methods and clinical practice. This is especially true for the construction of mutation databases. This paper presents a way of harmonizing abstract phenotype descriptions with patient data from clinical practice, and querying this dataset about relationships between phenotypes and genetic variants, at different levels of abstraction. Due to the current availability of ontological and terminological resources that have already reached some consensus in biomedicine, a reuse-based ontology engineering approach was followed. The proposed approach uses the Ontology Web Language (OWL) to represent the phenotype ontology and the patient model, the Semantic Web Rule Language (SWRL) to bridge the gap between phenotype descriptions and clinical data, and the Semantic Query Web Rule Language (SQWRL) to query relevant phenotype-genotype bidirectional relationships. The work tests the use of semantic web technology in the biomedical research domain named cerebrotendinous xanthomatosis (CTX), using a real dataset and ontologies. A framework to query relevant phenotype-genotype bidirectional relationships is provided. Phenotype descriptions and patient data were harmonized by defining 28 Horn-like rules in terms of the OWL concepts. In total, 24 patterns of SWQRL queries were designed following the initial list of competency questions. As the approach is based on OWL, the semantic of the framework adapts the standard logical model of an open world assumption. This work demonstrates how semantic web technologies can be used to support flexible representation and computational inference mechanisms

  10. Querying phenotype-genotype relationships on patient datasets using semantic web technology: the example of cerebrotendinous xanthomatosis

    Directory of Open Access Journals (Sweden)

    Taboada María

    2012-07-01

    Full Text Available Abstract Background Semantic Web technology can considerably catalyze translational genetics and genomics research in medicine, where the interchange of information between basic research and clinical levels becomes crucial. This exchange involves mapping abstract phenotype descriptions from research resources, such as knowledge databases and catalogs, to unstructured datasets produced through experimental methods and clinical practice. This is especially true for the construction of mutation databases. This paper presents a way of harmonizing abstract phenotype descriptions with patient data from clinical practice, and querying this dataset about relationships between phenotypes and genetic variants, at different levels of abstraction. Methods Due to the current availability of ontological and terminological resources that have already reached some consensus in biomedicine, a reuse-based ontology engineering approach was followed. The proposed approach uses the Ontology Web Language (OWL to represent the phenotype ontology and the patient model, the Semantic Web Rule Language (SWRL to bridge the gap between phenotype descriptions and clinical data, and the Semantic Query Web Rule Language (SQWRL to query relevant phenotype-genotype bidirectional relationships. The work tests the use of semantic web technology in the biomedical research domain named cerebrotendinous xanthomatosis (CTX, using a real dataset and ontologies. Results A framework to query relevant phenotype-genotype bidirectional relationships is provided. Phenotype descriptions and patient data were harmonized by defining 28 Horn-like rules in terms of the OWL concepts. In total, 24 patterns of SWQRL queries were designed following the initial list of competency questions. As the approach is based on OWL, the semantic of the framework adapts the standard logical model of an open world assumption. Conclusions This work demonstrates how semantic web technologies can be used to support

  11. Croatian Analytical Terminology

    Directory of Open Access Journals (Sweden)

    Kastelan-Macan; M.

    2008-04-01

    Full Text Available Results of analytical research are necessary in all human activities. They are inevitable in making decisions in the environmental chemistry, agriculture, forestry, veterinary medicine, pharmaceutical industry, and biochemistry. Without analytical measurements the quality of materials and products cannot be assessed, so that analytical chemistry is an essential part of technical sciences and disciplines.The language of Croatian science, and analytical chemistry within it, was one of the goals of our predecessors. Due to the political situation, they did not succeed entirely, but for the scientists in independent Croatia this is a duty, because language is one of the most important features of the Croatian identity. The awareness of the need to introduce Croatian terminology was systematically developed in the second half of the 19th century, along with the founding of scientific societies and the wish of scientists to write their scientific works in Croatian, so that the results of their research may be applied in economy. Many authors of textbooks from the 19th and the first half of the 20th century contributed to Croatian analytical terminology (F. Rački, B. Šulek, P. Žulić, G. Pexidr, J. Domac, G. Janeček , F. Bubanović, V. Njegovan and others. M. DeŢelić published the first systematic chemical terminology in 1940, adjusted to the IUPAC recommendations. In the second half of 20th century textbooks in classic analytical chemistry were written by V. Marjanović-Krajovan, M. Gyiketta-Ogrizek, S. Žilić and others. I. Filipović wrote the General and Inorganic Chemistry textbook and the Laboratory Handbook (in collaboration with P. Sabioncello and contributed greatly to establishing the terminology in instrumental analytical methods.The source of Croatian nomenclature in modern analytical chemistry today are translated textbooks by Skoog, West and Holler, as well as by Günnzler i Gremlich, and original textbooks by S. Turina, Z.

  12. jQuery Mobile

    CERN Document Server

    Reid, Jon

    2011-01-01

    Native apps have distinct advantages, but the future belongs to mobile web apps that function on a broad range of smartphones and tablets. Get started with jQuery Mobile, the touch-optimized framework for creating apps that look and behave consistently across many devices. This concise book provides HTML5, CSS3, and JavaScript code examples, screen shots, and step-by-step guidance to help you build a complete working app with jQuery Mobile. If you're already familiar with the jQuery JavaScript library, you can use your existing skills to build cross-platform mobile web apps right now. This b

  13. XPath Whole Query Optimization

    CERN Document Server

    Maneth, Sebastian

    2010-01-01

    Previous work reports about SXSI, a fast XPath engine which executes tree automata over compressed XML indexes. Here, reasons are investigated why SXSI is so fast. It is shown that tree automata can be used as a general framework for fine grained XML query optimization. We define the "relevant nodes" of a query as those nodes that a minimal automaton must touch in order to answer the query. This notion allows to skip many subtrees during execution, and, with the help of particular tree indexes, even allows to skip internal nodes of the tree. We efficiently approximate runs over relevant nodes by means of on-the-fly removal of alternation and non-determinism of (alternating) tree automata. We also introduce many implementation techniques which allows us to efficiently evaluate tree automata, even in the absence of special indexes. Through extensive experiments, we demonstrate the impact of the different optimization techniques.

  14. Code query by example

    Science.gov (United States)

    Vaucouleur, Sebastien

    2011-02-01

    We introduce code query by example for customisation of evolvable software products in general and of enterprise resource planning systems (ERPs) in particular. The concept is based on an initial empirical study on practices around ERP systems. We motivate our design choices based on those empirical results, and we show how the proposed solution helps with respect to the infamous upgrade problem: the conflict between the need for customisation and the need for upgrade of ERP systems. We further show how code query by example can be used as a form of lightweight static analysis, to detect automatically potential defects in large software products. Code query by example as a form of lightweight static analysis is particularly interesting in the context of ERP systems: it is often the case that programmers working in this field are not computer science specialists but more of domain experts. Hence, they require a simple language to express custom rules.

  15. Learning jQuery

    CERN Document Server

    Chaffer, Jonathan

    2013-01-01

    Step through each of the core concepts of the jQuery library, building an overall picture of its capabilities. Once you have thoroughly covered the basics, the book returns to each concept to cover more advanced examples and techniques.This book is for web designers who want to create interactive elements for their designs, and for developers who want to create the best user interface for their web applications. Basic JavaScript programming and knowledge of HTML and CSS is required. No knowledge of jQuery is assumed, nor is experience with any other JavaScript libraries.

  16. Fostering Multilinguality in the UMLS: A Computational Approach to Terminology Expansion for Multiple Languages.

    Science.gov (United States)

    Hellrich, Johannes; Hahn, Udo

    2014-01-01

    We here report on efforts to computationally support the maintenance and extension of multilingual biomedical terminology resources. Our main idea is to treat term acquisition as a classification problem guided by term alignment in parallel multilingual corpora, using termhood information coming from of a named entity recognition system as a novel feature. We report on experiments for Spanish, French, German and Dutch parts of a multilingual UMLS-derived biomedical terminology. These efforts yielded 19k, 18k, 23k and 12k new terms and synonyms, respectively, from which about half relate to concepts without a previously available term label for these non-English languages. Based on expert assessment of a novel German terminology sample, 80% of the newly acquired terms were judged as reasonable additions to the terminology.

  17. Generating and Executing Complex Natural Language Queries across Linked Data.

    Science.gov (United States)

    Hamon, Thierry; Mougin, Fleur; Grabar, Natalia

    2015-01-01

    With the recent and intensive research in the biomedical area, the knowledge accumulated is disseminated through various knowledge bases. Links between these knowledge bases are needed in order to use them jointly. Linked Data, SPARQL language, and interfaces in Natural Language question-answering provide interesting solutions for querying such knowledge bases. We propose a method for translating natural language questions in SPARQL queries. We use Natural Language Processing tools, semantic resources, and the RDF triples description. The method is designed on 50 questions over 3 biomedical knowledge bases, and evaluated on 27 questions. It achieves 0.78 F-measure on the test set. The method for translating natural language questions into SPARQL queries is implemented as Perl module available at http://search.cpan.org/ thhamon/RDF-NLP-SPARQLQuery.

  18. KoralQuery -- A General Corpus Query Protocol

    DEFF Research Database (Denmark)

    Bingel, Joachim; Diewald, Nils

    2015-01-01

    The task-oriented and format-driven development of corpus query systems has led to the creation of numerous corpus query languages (QLs) that vary strongly in expressiveness and syntax. This is a severe impediment for the interoperability of corpus analysis systems, which lack a common protocol....... In this paper, we present KoralQuery, a JSON-LD based general corpus query protocol, aiming to be independent of particular QLs, tasks and corpus formats. In addition to describing the system of types and operations that KoralQuery is built on, we exemplify the representation of corpus queries in the serialized...

  19. TERMINOLOGY IN PROCESS MANAGEMENT

    Directory of Open Access Journals (Sweden)

    Igor G. Fedorov

    2013-01-01

    Full Text Available We can be mistaken to formulate basic concepts of process management, and we are at risk to be on the wrong way solving the focused problems – instead of process management we could do automatization, instead of process system we could introduce function-oriented system. Without having a clear idea of the model we have to execute, we can plan this model as an analytical one and do not include all the necessary tools for management on the stage of planning. The article is targeted for the analysts who have skills in analytical modeling of business processes and would like to make a step forward to the implementation of these models. In order to become professionals in this field it is necessary to learn the terminology, first of all. 

  20. User perspectives on query difficulty

    DEFF Research Database (Denmark)

    Lioma, Christina; Larsen, Birger; Schütze, Hinrich

    2011-01-01

    , or to statistical and linguistic features of the queries that may render them difficult. This work addresses query difficulty from a different angle, namely the users’ own perspectives on query difficulty. Two research questions are asked: (1) Are users aware that the query they submit to an IR system may......The difficulty of a user query can affect the performance of Information Retrieval (IR) systems. What makes a query difficult and how one may predict this is an active research area, focusing mainly on factors relating to the retrieval algorithm, to the properties of the retrieval data...... for synthesising the user-assessed causes of query difficulty through opinion fusion into an overall assessment of query difficulty. The resulting assessments of query difficulty are found to agree notably more to the TREC categories than the direct user assessments....

  1. Spatial Keyword Querying

    DEFF Research Database (Denmark)

    Cao, Xin; Chen, Lisi; Cong, Gao;

    2012-01-01

    The web is increasingly being used by mobile users. In addition, it is increasingly becoming possible to accurately geo-position mobile users and web content. This development gives prominence to spatial web data management. Specifically, a spatial keyword query takes a user location and user-sup...... different kinds of functionality as well as the ideas underlying their definition....

  2. Spatial Keyword Query Processing

    DEFF Research Database (Denmark)

    Chen, Lisi; Jensen, Christian S.; Wu, Dingming

    2013-01-01

    an all-around survey of 12 state- of-the-art geo-textual indices. We propose a benchmark that en- ables the comparison of the spatial keyword query performance. We also report on the findings obtained when applying the bench- mark to the indices, thus uncovering new insights that may guide index...

  3. Conceptual querying through ontologies

    DEFF Research Database (Denmark)

    Andreasen, Troels; Bulskov, Henrik

    2009-01-01

    We present here ail approach to conceptual querying where the aim is, given a collection of textual database objects or documents, to target an abstraction of the entire database content in terms of the concepts appearing in documents, rather than the documents in the collection. The approach is ...

  4. XIRAF: Ultimate Forensic Querying

    NARCIS (Netherlands)

    Alink, W.; Bhoedjang, R.; Vries, A.P. de; Boncz, P.A.

    2006-01-01

    This paper describes a novel, XML-based approach towards managing and querying forensic traces extracted from digital evidence. This approach has been implemented in XIRAF, a prototype system for forensic analysis. XIRAF systematically applies forensic analysis tools to evidence files (e.g., hard di

  5. Query Driven Visualization

    CERN Document Server

    Buddelmeijer, Hugo

    2011-01-01

    The request driven way of deriving data in Astro-WISE is extended to a query driven way of visualization. This allows scientists to focus on the science they want to perform, because all administration of their data is automated. This can be done over an abstraction layer that enhances control and flexibility for the scientist.

  6. Flexible Query Answering Systems

    DEFF Research Database (Denmark)

    -computer interaction. The special track covers some some specific and, typically, newer fields, namely: environmental scanning for strategic early warning; generating linguistic descriptions of data; advances in fuzzy querying and fuzzy databases: theory and applications; fusion and ensemble techniques for on......-line learning on data streams; and intelligent information extraction from texts....

  7. Flexible Query Answering Systems

    DEFF Research Database (Denmark)

    This book constitutes the refereed proceedings of the 12th International Conference on Flexible Query Answering Systems, FQAS 2017, held in London, UK, in June 2017. The 21 full papers presented in this book together with 4 short papers were carefully reviewed and selected from 43 submissions...

  8. Terminology Management at the National Language Service

    African Journals Online (AJOL)

    practice such as terminology management, the nature of terminology and terminography, and work-flow ... ernment by providing terminology information in all the official South African languages. ...... tics, Supplement 20: 168-194. Cluver, A.D. ...

  9. Learning via Query Synthesis

    KAUST Repository

    Alabdulmohsin, Ibrahim Mansour

    2017-05-07

    Active learning is a subfield of machine learning that has been successfully used in many applications. One of the main branches of active learning is query synthe- sis, where the learning agent constructs artificial queries from scratch in order to reveal sensitive information about the underlying decision boundary. It has found applications in areas, such as adversarial reverse engineering, automated science, and computational chemistry. Nevertheless, the existing literature on membership query synthesis has, generally, focused on finite concept classes or toy problems, with a limited extension to real-world applications. In this thesis, I develop two spectral algorithms for learning halfspaces via query synthesis. The first algorithm is a maximum-determinant convex optimization method while the second algorithm is a Markovian method that relies on Khachiyan’s classical update formulas for solving linear programs. The general theme of these methods is to construct an ellipsoidal approximation of the version space and to synthesize queries, afterward, via spectral decomposition. Moreover, I also describe how these algorithms can be extended to other settings as well, such as pool-based active learning. Having demonstrated that halfspaces can be learned quite efficiently via query synthesis, the second part of this thesis proposes strategies for mitigating the risk of reverse engineering in adversarial environments. One approach that can be used to render query synthesis algorithms ineffective is to implement a randomized response. In this thesis, I propose a semidefinite program (SDP) for learning a distribution of classifiers, subject to the constraint that any individual classifier picked at random from this distributions provides reliable predictions with a high probability. This algorithm is, then, justified both theoretically and empirically. A second approach is to use a non-parametric classification method, such as similarity-based classification. In this

  10. Google BigQuery analytics

    CERN Document Server

    Tigani, Jordan

    2014-01-01

    How to effectively use BigQuery, avoid common mistakes, and execute sophisticated queries against large datasets Google BigQuery Analytics is the perfect guide for business and data analysts who want the latest tips on running complex queries and writing code to communicate with the BigQuery API. The book uses real-world examples to demonstrate current best practices and techniques, and also explains and demonstrates streaming ingestion, transformation via Hadoop in Google Compute engine, AppEngine datastore integration, and using GViz with Tableau to generate charts of query results. In addit

  11. User perspectives on query difficulty

    DEFF Research Database (Denmark)

    Lioma, Christina; Larsen, Birger; Schütze, Hinrich

    2011-01-01

    The difficulty of a user query can affect the performance of Information Retrieval (IR) systems. What makes a query difficult and how one may predict this is an active research area, focusing mainly on factors relating to the retrieval algorithm, to the properties of the retrieval data, or to sta......The difficulty of a user query can affect the performance of Information Retrieval (IR) systems. What makes a query difficult and how one may predict this is an active research area, focusing mainly on factors relating to the retrieval algorithm, to the properties of the retrieval data......, or to statistical and linguistic features of the queries that may render them difficult. This work addresses query difficulty from a different angle, namely the users’ own perspectives on query difficulty. Two research questions are asked: (1) Are users aware that the query they submit to an IR system may...

  12. [Standardized terminology for disc disease].

    Science.gov (United States)

    Sánchez Pérez, M; Gil Sierra, A; Sánchez Martín, A; Gallego Gómez, P; Pereira Boo, D

    2012-01-01

    This article reviews the terminology used to describe morphological alterations in the intervertebral discs. Radiologists must be able to communicate information about the type, location, and severity of these alterations to medical and surgical clinicians. It is crucial to use simple, standard, and unified terminology to ensure comprehension not only among radiologists but also with professionals from the different specialties for whom the radiology reports are written (fundamentally traumatologists and neurosurgeons). This terminology will help ensure a more accurate diagnosis and better patient management.

  13. COMPLEX QUERY AND METADATA

    OpenAIRE

    Nakatoh, Tetsuya; Omori, Keisuke; Yamada, Yasuhiro; Hirokawa, Sachio

    2003-01-01

    We are developing a search system DAISEn which integrates multiple search engines and generates a metasearch engine automatically. The target search engines of DAISEn are not general search engines, but are search engines specialized in some area. Integration of such engines yields efficiency and quality. There are search engines of new type which accept complex query and return structured data. Integration of such search engines is much harder than that of simple search engines which accept ...

  14. Querying genomic databases

    Energy Technology Data Exchange (ETDEWEB)

    Baehr, A.; Hagstrom, R.; Joerg, D.; Overbeek, R.

    1991-09-01

    A natural-language interface has been developed that retrieves genomic information by using a simple subset of English. The interface spares the biologist from the task of learning database-specific query languages and computer programming. Currently, the interface deals with the E. coli genome. It can, however, be readily extended and shows promise as a means of easy access to other sequenced genomic databases as well.

  15. Electronics and Lithuanian Terminology

    Directory of Open Access Journals (Sweden)

    Stasys Zajankauskas

    2011-04-01

    Full Text Available It is found that the vacuum triode, transistor, monolithic circuit and microprocessor were the most important inventions of traditional electronics. Thus, the origins of the traditional electronics should be associated with the invention of the vacuum triode, but not with the invention of vacuum diode. It is shown that the science of electronics is not as young as computer science or up-to-date information technologies: electronics, including active electronics, had already celebrated the centenary, and the period of 2004–2008 is the period of numerous already solid jubilees. Thus, the terminology of electronics is not at initial stage of evolution as well – general terms should be already systematized and normalized. However, Lithuanian terms for electronic devices invented before tens of years and terms for old-defined notions associated with these devices are still varying, some are worsened. Especially, the incorrectly motivated terms used for variations of transistors and microcircuits are analyzed in the article. It is motivated which terms are preferable, systematic and exact. The paper is dedicated to the 50th anniversary of monolithic circuit, as well as the 60th anniversary of transistor, the 40th jubilee of microprocessor and centenary of electronics.

  16. A Semantic Graph Query Language

    Energy Technology Data Exchange (ETDEWEB)

    Kaplan, I L

    2006-10-16

    Semantic graphs can be used to organize large amounts of information from a number of sources into one unified structure. A semantic query language provides a foundation for extracting information from the semantic graph. The graph query language described here provides a simple, powerful method for querying semantic graphs.

  17. Query optimization over crowdsourced data

    KAUST Repository

    Park, Hyunjung

    2013-08-26

    Deco is a comprehensive system for answering declarative queries posed over stored relational data together with data obtained on-demand from the crowd. In this paper we describe Deco\\'s cost-based query optimizer, building on Deco\\'s data model, query language, and query execution engine presented earlier. Deco\\'s objective in query optimization is to find the best query plan to answer a query, in terms of estimated monetary cost. Deco\\'s query semantics and plan execution strategies require several fundamental changes to traditional query optimization. Novel techniques incorporated into Deco\\'s query optimizer include a cost model distinguishing between "free" existing data versus paid new data, a cardinality estimation algorithm coping with changes to the database state during query execution, and a plan enumeration algorithm maximizing reuse of common subplans in a setting that makes reuse challenging. We experimentally evaluate Deco\\'s query optimizer, focusing on the accuracy of cost estimation and the efficiency of plan enumeration.

  18. Mastering jQuery mobile

    CERN Document Server

    Lambert, Chip

    2015-01-01

    You've started down the path of jQuery Mobile, now begin mastering some of jQuery Mobile's higher level topics. Go beyond jQuery Mobile's documentation and master one of the hottest mobile technologies out there. Previous JavaScript and PHP experience can help you get the most out of this book.

  19. A query index for continuous queries on RFID streaming data

    Institute of Scientific and Technical Information of China (English)

    Jaekwan PARK; Bonghee HONG; Chaehoon BAN

    2008-01-01

    RFID middleware collects and filters RFID streaming data to process applications' requests called continuous queries, because they are executed continuously during tag movement. Several approaches to building an index on queries rather than data records, called a query index, have been proposed to evaluate continuous queries over streaming data. EPCgiobal proposed an Event Cycle Specification (ECSpec) model, which is a de facto standard query interface for RFID applications. Continuous queries based on ECSpec consist of a large number of segments that represent the query conditions. The problem when using any of the existing query indexes on these continuous queries is that it takes a long time to build the index, because it is necessary to insert a large number of segments into the index. To solve this problem, we propose a transform method that converts a group of segments into compressed data. We also propose an efficient query index scheme for the transformed space. Comparing with existing query indexes, the performance of proposed index outperforms the others on various datasets.

  20. Anglicisms in Electrical Engineering Terminology

    OpenAIRE

    Liermann - Zeljak, Yvonne

    2013-01-01

    This paper addresses the problem of increasing penetration of Anglicisms in electrical engineering terminology, with particular emphasis on computer terminology. This widespread phenomenon is part of a larger language process influenced by globalization, in which the boundaries between languages have become less rigid. Furthermore, the problem of their integration into the Croatian language system is analyzed. Examples excerpted from Croatian popular magazines and scientific journals in the f...

  1. Terminology mining in social media

    OpenAIRE

    Sahlgren, Magnus; Karlgren, Jussi

    2009-01-01

    The highly variable and dynamic word usage in social media presents serious challenges for both research and those commercial applications that are geared towards blogs or other user-generated non-editorial texts. This paper discusses and exemplifies a terminology mining approach for dealing with the productive character of the textual environment in social media. We explore the challenges of practically acquiring new terminology, and of modeling similarity and relatedness of terms from observ...

  2. An alternative database approach for management of SNOMED CT and improved patient data queries.

    Science.gov (United States)

    Campbell, W Scott; Pedersen, Jay; McClay, James C; Rao, Praveen; Bastola, Dhundy; Campbell, James R

    2015-10-01

    SNOMED CT is the international lingua franca of terminologies for human health. Based in Description Logics (DL), the terminology enables data queries that incorporate inferences between data elements, as well as, those relationships that are explicitly stated. However, the ontologic and polyhierarchical nature of the SNOMED CT concept model make it difficult to implement in its entirety within electronic health record systems that largely employ object oriented or relational database architectures. The result is a reduction of data richness, limitations of query capability and increased systems overhead. The hypothesis of this research was that a graph database (graph DB) architecture using SNOMED CT as the basis for the data model and subsequently modeling patient data upon the semantic core of SNOMED CT could exploit the full value of the terminology to enrich and support advanced data querying capability of patient data sets. The hypothesis was tested by instantiating a graph DB with the fully classified SNOMED CT concept model. The graph DB instance was tested for integrity by calculating the transitive closure table for the SNOMED CT hierarchy and comparing the results with transitive closure tables created using current, validated methods. The graph DB was then populated with 461,171 anonymized patient record fragments and over 2.1 million associated SNOMED CT clinical findings. Queries, including concept negation and disjunction, were then run against the graph database and an enterprise Oracle relational database (RDBMS) of the same patient data sets. The graph DB was then populated with laboratory data encoded using LOINC, as well as, medication data encoded with RxNorm and complex queries performed using LOINC, RxNorm and SNOMED CT to identify uniquely described patient populations. A graph database instance was successfully created for two international releases of SNOMED CT and two US SNOMED CT editions. Transitive closure tables and descriptive

  3. Bayesian Query-Focused Summarization

    CERN Document Server

    Daumé, Hal

    2009-01-01

    We present BayeSum (for ``Bayesian summarization''), a model for sentence extraction in query-focused summarization. BayeSum leverages the common case in which multiple documents are relevant to a single query. Using these documents as reinforcement for query terms, BayeSum is not afflicted by the paucity of information in short queries. We show that approximate inference in BayeSum is possible on large data sets and results in a state-of-the-art summarization system. Furthermore, we show how BayeSum can be understood as a justified query expansion technique in the language modeling for IR framework.

  4. Sport supporting act: terminology issues

    Directory of Open Access Journals (Sweden)

    Petr Vlček

    2013-01-01

    Full Text Available BACKGROUND: The text deals with terminology issues from an interdisciplinary point of view. It is based on two different disciplines, law and kinanthropology, in an area of their overlap. AIM: The aim of the author is to point out some possible legislative problems, which could arise due to the current reading of the sport supporting act (Act no. 115/2001. The second aim of the author is to contribute to the discussion of kinantropologists (possibly also the educational researchers and lawyers and to stress the importance of the systematic approach to terminology formulation. METHODS: The author uses the method of language interpretation. We also use the basic analytical methods, induction and deduction, while we stress the systematic approach to the term formulation. RESULTS: The analysis of the sport supporting act terminology shows some specific legislative problems, which could arise due to the definition of sport in the sport supporting act. The author discusses a possible alternative solution. CONCLUSION: According to the opinion of the author, clear, obvious and unified terminology of kinantropologists as specialists in their discipline should represent a source, from which other sciences could derive their terminology. Defined and inexpert terminology used in other disciplines should not be used as an argument for its adopting in kinanthropology.

  5. Terminology in Doing Business English Translation

    Institute of Scientific and Technical Information of China (English)

    周樱

    2011-01-01

    Terminology plays an important role in doing business English translation.This paper will try to give tentative definitions of what is terminology,of what is business English translation,and render some examples to exemplify the significant impacts of terminology in doing BET.In author's opinion the scope of "terminology" is quite broad.

  6. 40 CFR 1508.1 - Terminology.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 32 2010-07-01 2010-07-01 false Terminology. 1508.1 Section 1508.1 Protection of Environment COUNCIL ON ENVIRONMENTAL QUALITY TERMINOLOGY AND INDEX § 1508.1 Terminology. The terminology of this part shall be uniform throughout the Federal Government....

  7. Terminology for houses and house remains

    OpenAIRE

    Rosberg, Karin

    2013-01-01

    In order to obtain lucidity, it is essential to choose adequate terminology when speaking of prehistoric houses. The understanding of house construction requires a terminology with a focus on construction. Very often, archaeologists instead use a terminology with a focus on the remains, and use an inadequate terminology for constructions, indicating that they do not fully consider how the constructions work. The article presents some suggestions for adequate construction terminology.

  8. Terminology Management at the National Language Service

    OpenAIRE

    Mariëtta Alberts

    2011-01-01

    Abstract: Terminology is a strategic resource in a multilingual country. It is the medium through which knowledge and information is disseminated. lhrough the use of correct, standardised terminology, effective scientific and technical communication skills are developed. A brief overview is given of terminology development in South Africa, with special emphasis on the work of the Terminology Division of the National Language Service. Aspects of present terminology practice such as te...

  9. Instant Cassandra query language

    CERN Document Server

    Singh, Amresh

    2013-01-01

    Get to grips with a new technology, understand what it is and what it can do for you, and then get to work with the most important features and tasks. It's an Instant Starter guide.Instant Cassandra Query Language is great for those who are working with Cassandra databases and who want to either learn CQL to check data from the console or build serious applications using CQL. If you're looking for something that helps you get started with CQL in record time and you hate the idea of learning a new language syntax, then this book is for you.

  10. The Changes in Architecture Terminology

    Directory of Open Access Journals (Sweden)

    Francois Tran

    2012-10-01

    Full Text Available The intention of this research is to inspire a discussion about the changes in architecture terminologywith the revolution in communication and representation forms as a result of digitalisation.The blurred boundary between the virtual and the analogue worlds, the misunderstandings andthe confusion that appear with the interaction of these two worlds nowadays form the major problems facing architectural design, education and research. The researchers in this field arefocused on the interface, the meeting and the transformation point between the digital and analogue worlds in order to prevent those problems and confusions. One of the main reasonsof this ambiguity is the architectural terminology that changes according to the changing status of architectural representation i.e. new forms of representation; new forms of communicationi.e. the new role of the architect and the researcher.Whenever and wherever information and knowledge specialised is created, communicated ortransformed terminology is involved in a way or another. An absence of terminology is combined with an absence of an understanding of concepts. Therefore with the new information and communication technologies; new and developing subject areas the existence of terminology and its update is indispensable. Thus the changing status of the terminology must be analysed. As architecture terminology is essential to improve today’s challenging, multidisciplinary communication in order to clarify the problems of ambiguity and unawareness (as a result of shift of specific architectural vocabulary it is necessary to analyse the changes in the architectural terminology which will form the discussion point of the following paper.As this paper is the beginning step of a research project which started on the occasion of the conference proposed by EAAE/ARCC we will here present only the objectives of this research,its general problematics, the methods that we wish to develop and some provisional

  11. An Efficient Algorithm for Query Transformation in Semantic Query Optimization

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Semantic query optimization (SQO) is comparatively a recent approach for the transformation of given query into equivalent alternative query using matching rules in order to select an optimal query based on the costs of executing alternative queries. The key aspect of the algorithm proposed here is that previous proposed SQO techniques can be considered equally in the uniform cost model, with which optimization opportunities will not be missed. At the same time, the authors used the implication closure to guarantee that any matched rule will not be lost. The authors implemented their algorithm for the optimization of decomposed sub-query in local database in Multi-Database Integrator (MDBI), which is a multidatabase project. The experimental results verify that this algorithm is effective in the process of SQO.

  12. Optimizing Phylogenetic Queries for Performance.

    Science.gov (United States)

    Jamil, Hasan M

    2017-08-24

    The vast majority of phylogenetic databases do not support declarative querying using which their contents can be flexibly and conveniently accessed and the template based query interfaces they support do not allow arbitrary speculative queries. They therefore also do not support query optimization leveraging unique phylogeny properties. While a small number of graph query languages such as XQuery, Cypher and GraphQL exist for computer savvy users, most are too general and complex to be useful for biologists, and too inefficient for large phylogeny querying. In this paper, we discuss a recently introduced visual query language, called PhyQL, that leverages phylogeny specific properties to support essential and powerful constructs for a large class of phylogentic queries. We develop a range of pruning aids, and propose a substantial set of query optimization strategies using these aids suitable for large phylogeny querying. A hybrid optimization technique that exploits a set of indices and ``graphlet" partitioning is discussed. A ``fail soonest" strategy is used to avoid hopeless processing and is shown to produce dividends. Possible novel optimization techniques yet to be explored are also discussed.

  13. Query Refinement by Multi Word Term expansions and semantic synonymy

    CERN Document Server

    Lux-Pogodalla, Veronila

    2008-01-01

    We developed a system, TermWatch (https://stid-bdd.iut.univ-metz.fr/TermWatch/index.pl), which combines a linguistic extraction of terms, their structuring into a terminological network with a clustering algorithm. In this paper we explore its ability in integrating the most promising aspects of the studies on query refinement: choice of meaningful text units to cluster (domain terms), choice of tight semantic relations with which to cluster terms, structuring of terms in a network enabling abetter perception of domain concepts. We have run this experiment on the 367 645 English abstracts of PASCAL 2005-2006 bibliographic database (http://www.inist.fr) and compared the structured terminological resource automatically build by TermWarch to the English segment of TermScience resource (http://termsciences.inist.fr/) containing 88 211 terms.

  14. Terminology versus action (Editorial

    Directory of Open Access Journals (Sweden)

    Lindsay Glynn

    2006-12-01

    Full Text Available I have heard it said, as many of us have, that evidence based library and information practice is an area dominated and led by librarians in the health sciences. It is a logical leap to say that medical librarians may be more familiar with the evidence based model of practice because of their need to be familiar, on some level, with evidence based medicine. The idea of making a decision based on the appropriate evidence is as familiar to a medical librarianas is how to effectively search PubMed. How pervasive is the influence of the medical profession on this area? Being a librarian looking for quick information, I turned to Google. The results on the first two pages from a Google search for evidence based practice are 100% health/medicine related. Being a good librarian, I refined my search to see how the results would differ, and I added the term library to the search. This time there were 75% health/medicine results and 5% representing evidence based library and information practice (eblip. Note that a high percentage of the health/medicine hits were library webpages on evidence based medicine. Being an obsessive‐compulsive librarian, I changed my search strategy again by replacing library with librarianship. This time there were 30% health/medicine results and 65% eblip. A final search for evidence based information had this journal as the top hit. Being a busy librarian with a lot of work to do, I stopped right there. OK, so the terminology appears to point strongly in one direction and weighs heavily on the health sciences penetration. Let’s leave terminology aside for a moment and look at action. Since Evidence Based Library and Information Practice is the first journal on this topic, the list of contributors and their backgrounds should give an indication on whether or not there is a concentration of medical librarians. Approximately two thirds of the articles that we have published are non‐health/medicine related. Only 29% of our

  15. Cooperative Answering of Fuzzy Queries

    Institute of Scientific and Technical Information of China (English)

    Narjes Hachani; Mohamed Ali Ben Hassine; Hanène Chettaoui; Habib Ounelli

    2009-01-01

    The majority of existing information systems deals with crisp data through crisp database systems. Traditional Database Management Systems (DBMS) have not taken into account imprecision so one can say there is some sort of lack of flexibility. The reason is that queries retrieve only elements which precisely match to the given Boolean query. That is, an element belongs to the result if the query is true for this element; otherwise, no answers are returned to the user. The aim of this paper is to present a cooperative approach to handling empty answers of fuzzy conjunctive queries by referring to the Formal Concept Analysis (FCA) theory and fuzzy logic. We present an architecture which combines FCA and databases. The processing of fuzzy queries allows detecting the minimal reasons of empty answers. We also use concept lattice in order to provide the user with the nearest answers in the case of a query failure.

  16. CrossQuery: a web tool for easy associative querying of transcriptome data.

    Directory of Open Access Journals (Sweden)

    Toni U Wagner

    Full Text Available Enormous amounts of data are being generated by modern methods such as transcriptome or exome sequencing and microarray profiling. Primary analyses such as quality control, normalization, statistics and mapping are highly complex and need to be performed by specialists. Thereafter, results are handed back to biomedical researchers, who are then confronted with complicated data lists. For rather simple tasks like data filtering, sorting and cross-association there is a need for new tools which can be used by non-specialists. Here, we describe CrossQuery, a web tool that enables straight forward, simple syntax queries to be executed on transcriptome sequencing and microarray datasets. We provide deep-sequencing data sets of stem cell lines derived from the model fish Medaka and microarray data of human endothelial cells. In the example datasets provided, mRNA expression levels, gene, transcript and sample identification numbers, GO-terms and gene descriptions can be freely correlated, filtered and sorted. Queries can be saved for later reuse and results can be exported to standard formats that allow copy-and-paste to all widespread data visualization tools such as Microsoft Excel. CrossQuery enables researchers to quickly and freely work with transcriptome and microarray data sets requiring only minimal computer skills. Furthermore, CrossQuery allows growing association of multiple datasets as long as at least one common point of correlated information, such as transcript identification numbers or GO-terms, is shared between samples. For advanced users, the object-oriented plug-in and event-driven code design of both server-side and client-side scripts allow easy addition of new features, data sources and data types.

  17. CrossQuery: a web tool for easy associative querying of transcriptome data.

    Science.gov (United States)

    Wagner, Toni U; Fischer, Andreas; Thoma, Eva C; Schartl, Manfred

    2011-01-01

    Enormous amounts of data are being generated by modern methods such as transcriptome or exome sequencing and microarray profiling. Primary analyses such as quality control, normalization, statistics and mapping are highly complex and need to be performed by specialists. Thereafter, results are handed back to biomedical researchers, who are then confronted with complicated data lists. For rather simple tasks like data filtering, sorting and cross-association there is a need for new tools which can be used by non-specialists. Here, we describe CrossQuery, a web tool that enables straight forward, simple syntax queries to be executed on transcriptome sequencing and microarray datasets. We provide deep-sequencing data sets of stem cell lines derived from the model fish Medaka and microarray data of human endothelial cells. In the example datasets provided, mRNA expression levels, gene, transcript and sample identification numbers, GO-terms and gene descriptions can be freely correlated, filtered and sorted. Queries can be saved for later reuse and results can be exported to standard formats that allow copy-and-paste to all widespread data visualization tools such as Microsoft Excel. CrossQuery enables researchers to quickly and freely work with transcriptome and microarray data sets requiring only minimal computer skills. Furthermore, CrossQuery allows growing association of multiple datasets as long as at least one common point of correlated information, such as transcript identification numbers or GO-terms, is shared between samples. For advanced users, the object-oriented plug-in and event-driven code design of both server-side and client-side scripts allow easy addition of new features, data sources and data types.

  18. Ranking Queries on Uncertain Data

    CERN Document Server

    Hua, Ming

    2011-01-01

    Uncertain data is inherent in many important applications, such as environmental surveillance, market analysis, and quantitative economics research. Due to the importance of those applications and rapidly increasing amounts of uncertain data collected and accumulated, analyzing large collections of uncertain data has become an important task. Ranking queries (also known as top-k queries) are often natural and useful in analyzing uncertain data. Ranking Queries on Uncertain Data discusses the motivations/applications, challenging problems, the fundamental principles, and the evaluation algorith

  19. Research Issues in Mobile Querying

    DEFF Research Database (Denmark)

    Breunig, M.; Jensen, Christian Søndergaard; Klein, M.

    2004-01-01

    This document reports on key aspects of the discussions conducted within the working group. In particular, the document aims to offer a structured and somewhat digested summary of the group's discussions. The document first offers concepts that enable characterization of "mobile queries" as well...... as the types of systems that enable such queries. It explores the notion of context in mobile queries. The document ends with a few observations, mainly regarding challenges....

  20. Optimizing queries in distributed systems

    Directory of Open Access Journals (Sweden)

    Ion LUNGU

    2006-01-01

    Full Text Available This research presents the main elements of query optimizations in distributed systems. First, data architecture according with system level architecture in a distributed environment is presented. Then the architecture of a distributed database management system (DDBMS is described on conceptual level followed by the presentation of the distributed query execution steps on these information systems. The research ends with presentation of some aspects of distributed database query optimization and strategies used for that.

  1. Smart Query Answering for Marine Sensor Data

    Directory of Open Access Journals (Sweden)

    Paulo de Souza

    2011-03-01

    Full Text Available We review existing query answering systems for sensor data. We then propose an extended query answering approach termed smart query, specifically for marine sensor data. The smart query answering system integrates pattern queries and continuous queries. The proposed smart query system considers both streaming data and historical data from marine sensor networks. The smart query also uses query relaxation technique and semantics from domain knowledge as a recommender system. The proposed smart query benefits in building data and information systems for marine sensor networks.

  2. Data Caching for XML Query

    Institute of Scientific and Technical Information of China (English)

    SU Fei; CI Lin-lin; ZHU Li-ping; ZHAO Xin-xin

    2006-01-01

    In order to apply the technique of data cache to extensible markup language (XML) database system, the XML-cache system to support data cache for XQuery is presented. According to the character of XML, the queries with nesting are normalized to facilitate the following operation. Based on the idea of incomplete tree, using the document type definition (DTD) schema tree and conditions from normalized XQuery, the results of previous queries are maintained to answer new queries, at the same time, the remainder queries are sent to XML database at the back. The results of experiment show all applications supported by XML database can use this technique to cache data for future use.

  3. From Questions to Queries

    Directory of Open Access Journals (Sweden)

    M. Drlík

    2007-12-01

    Full Text Available The extension of (Internet databases forceseveryone to become more familiar with techniques of datastorage and retrieval because users’ success often dependson their ability to pose right questions and to be able tointerpret their answers. University programs pay moreattention to developing database programming skills than todata exploitation skills. To educate our students to become“database users”, the authors intensively exploit supportivetools simplifying the production of database elements astables, queries, forms, reports, web pages, and macros.Videosequences demonstrating “standard operations” forcompleting them have been prepared to enhance out-ofclassroomlearning. The use of SQL and other professionaltools is reduced to the cases when the wizards are unable togenerate the intended construct.

  4. Modeling Integration and Reuse of Heterogeneous Terminologies in Faceted Browsing Systems.

    Science.gov (United States)

    Harris, Daniel R

    2016-07-01

    We integrate heterogeneous terminologies into our category-theoretic model of faceted browsing and show that existing terminologies and vocabularies can be reused as facets in a cohesive, interactive system. Commonly found in online search engines and digital libraries, faceted browsing systems depend upon one or more taxonomies which outline the structure and content of the facets available for user interaction. Controlled vocabularies or terminologies are often externally curated and are available as a reusable resource across systems. We demonstrated previously that category theory can abstractly model faceted browsing in a way that supports the development of interfaces capable of reusing and integrating multiple models of faceted browsing. We extend this model by illustrating that terminologies can be reused and integrated as facets across systems with examples from the biomedical domain.

  5. Modeling Integration and Reuse of Heterogeneous Terminologies in Faceted Browsing Systems

    Science.gov (United States)

    Harris, Daniel R.

    2017-01-01

    We integrate heterogeneous terminologies into our category-theoretic model of faceted browsing and show that existing terminologies and vocabularies can be reused as facets in a cohesive, interactive system. Commonly found in online search engines and digital libraries, faceted browsing systems depend upon one or more taxonomies which outline the structure and content of the facets available for user interaction. Controlled vocabularies or terminologies are often externally curated and are available as a reusable resource across systems. We demonstrated previously that category theory can abstractly model faceted browsing in a way that supports the development of interfaces capable of reusing and integrating multiple models of faceted browsing. We extend this model by illustrating that terminologies can be reused and integrated as facets across systems with examples from the biomedical domain.

  6. User Experimentation with Terminological Ontologies

    DEFF Research Database (Denmark)

    Pram Nielsen, Louise

    This paper outlines work-in-progress research suggesting that domain-specific knowledge in terminological resources can be transferred efficiently to end-users across different levels of expertise and by means of different information modes including articles (written mode) and concept diagrams...... (graph mode). An experimental approach is applied in an eye-tracking laboratory, where a natural user situation is replicated for Danish professional potential end-users of a ter-minology and knowledge bank in a chosen pilot domain (taxation)....

  7. eHealth Terminology Management in Austria.

    Science.gov (United States)

    Seerainer, Carina; Sabutsch, Stefan W

    2016-01-01

    When it comes to establishing and operating a nationwide personal health record (PHR), effective and efficient terminology management including the development, administration, maintenance and publishing of terminologies is a precondition for semantic interoperability. In the Austrian national patient health record "ELGA" all relevant terminologies are provided and distributed by means of a CTS2-conformant terminology server. In the following article, issues and lessons learned from terminology management in a large-scale eHealth project are presented. Experience has proved the necessity of a national authority for medical terminology management in Austria.

  8. KoralQuery -- A General Corpus Query Protocol

    DEFF Research Database (Denmark)

    Bingel, Joachim; Diewald, Nils

    2015-01-01

    The task-oriented and format-driven development of corpus query systems has led to the creation of numerous corpus query languages (QLs) that vary strongly in expressiveness and syntax. This is a severe impediment for the interoperability of corpus analysis systems, which lack a common protocol...... format and illustrate use cases in the KorAP project....

  9. Quantifying the impact and extent of undocumented biomedical synonymy.

    Directory of Open Access Journals (Sweden)

    David R Blair

    2014-09-01

    Full Text Available Synonymous relationships among biomedical terms are extensively annotated within specialized terminologies, implying that synonymy is important for practical computational applications within this field. It remains unclear, however, whether text mining actually benefits from documented synonymy and whether existing biomedical thesauri provide adequate coverage of these linguistic relationships. In this study, we examine the impact and extent of undocumented synonymy within a very large compendium of biomedical thesauri. First, we demonstrate that missing synonymy has a significant negative impact on named entity normalization, an important problem within the field of biomedical text mining. To estimate the amount synonymy currently missing from thesauri, we develop a probabilistic model for the construction of synonym terminologies that is capable of handling a wide range of potential biases, and we evaluate its performance using the broader domain of near-synonymy among general English words. Our model predicts that over 90% of these relationships are currently undocumented, a result that we support experimentally through "crowd-sourcing." Finally, we apply our model to biomedical terminologies and predict that they are missing the vast majority (>90% of the synonymous relationships they intend to document. Overall, our results expose the dramatic incompleteness of current biomedical thesauri and suggest the need for "next-generation," high-coverage lexical terminologies.

  10. Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience.

    Science.gov (United States)

    Pathak, Jyotishman; Wang, Janey; Kashyap, Sudha; Basford, Melissa; Li, Rongling; Masys, Daniel R; Chute, Christopher G

    2011-01-01

    Systematic study of clinical phenotypes is important for a better understanding of the genetic basis of human diseases and more effective gene-based disease management. A key aspect in facilitating such studies requires standardized representation of the phenotype data using common data elements (CDEs) and controlled biomedical vocabularies. In this study, the authors analyzed how a limited subset of phenotypic data is amenable to common definition and standardized collection, as well as how their adoption in large-scale epidemiological and genome-wide studies can significantly facilitate cross-study analysis. The authors mapped phenotype data dictionaries from five different eMERGE (Electronic Medical Records and Genomics) Network sites studying multiple diseases such as peripheral arterial disease and type 2 diabetes. For mapping, standardized terminological and metadata repository resources, such as the caDSR (Cancer Data Standards Registry and Repository) and SNOMED CT (Systematized Nomenclature of Medicine), were used. The mapping process comprised both lexical (via searching for relevant pre-coordinated concepts and data elements) and semantic (via post-coordination) techniques. Where feasible, new data elements were curated to enhance the coverage during mapping. A web-based application was also developed to uniformly represent and query the mapped data elements from different eMERGE studies. Approximately 60% of the target data elements (95 out of 157) could be mapped using simple lexical analysis techniques on pre-coordinated terms and concepts before any additional curation of terminology and metadata resources was initiated by eMERGE investigators. After curation of 54 new caDSR CDEs and nine new NCI thesaurus concepts and using post-coordination, the authors were able to map the remaining 40% of data elements to caDSR and SNOMED CT. A web-based tool was also implemented to assist in semi-automatic mapping of data elements. This study emphasizes the

  11. Facilitating biomedical researchers' interrogation of electronic health record data: Ideas from outside of biomedical informatics.

    Science.gov (United States)

    Hruby, Gregory W; Matsoukas, Konstantina; Cimino, James J; Weng, Chunhua

    2016-04-01

    Electronic health records (EHR) are a vital data resource for research uses, including cohort identification, phenotyping, pharmacovigilance, and public health surveillance. To realize the promise of EHR data for accelerating clinical research, it is imperative to enable efficient and autonomous EHR data interrogation by end users such as biomedical researchers. This paper surveys state-of-art approaches and key methodological considerations to this purpose. We adapted a previously published conceptual framework for interactive information retrieval, which defines three entities: user, channel, and source, by elaborating on channels for query formulation in the context of facilitating end users to interrogate EHR data. We show the current progress in biomedical informatics mainly lies in support for query execution and information modeling, primarily due to emphases on infrastructure development for data integration and data access via self-service query tools, but has neglected user support needed during iteratively query formulation processes, which can be costly and error-prone. In contrast, the information science literature has offered elaborate theories and methods for user modeling and query formulation support. The two bodies of literature are complementary, implying opportunities for cross-disciplinary idea exchange. On this basis, we outline the directions for future informatics research to improve our understanding of user needs and requirements for facilitating autonomous interrogation of EHR data by biomedical researchers. We suggest that cross-disciplinary translational research between biomedical informatics and information science can benefit our research in facilitating efficient data access in life sciences.

  12. Usability of XML Query Languages

    NARCIS (Netherlands)

    Graaumans, J.P.M.

    2005-01-01

    The eXtensible Markup Language (XML) is a markup language which enables re-use of information. Specific query languages for XML are developed to facilitate this. There are large differences between history, design goal, and syntax of the XML query languages. However, in practice these languages are

  13. The Semantics of Query Modification

    NARCIS (Netherlands)

    Hollink, V.; Tsikrika, T.; Vries, A.P. de

    2010-01-01

    We present a method that exploits `linked data' to determine semantic relations between consecutive user queries. Our method maps queries onto concepts in linked data and searches the linked data graph for direct or indirect relations between the concepts. By comparing relations between large number

  14. Querying Sentiment Development over Time

    DEFF Research Database (Denmark)

    Andreasen, Troels; Christiansen, Henning; Have, Christian Theil

    2013-01-01

    that measures how well a hypothesis characterizes a given time interval; the semantics is parameterized so it can be adjusted to different views of the data. EmoEpisodes is extended to a query language with variables standing for unknown topics and emotions, and the query-answering mechanism will return...

  15. Priming the Query Specification Process.

    Science.gov (United States)

    Toms, Elaine G.; Freund, Luanne

    2003-01-01

    Tests the use of questions as a technique in the query specification process. Using a within-subjects design, 48 people interacted with a modified Google interface to solve four information problems in four domains. Half the tasks were entered as typical keyword queries, and half as questions or statements. Results suggest the typical search box…

  16. IBE Glossary of Curriculum Terminology

    Science.gov (United States)

    UNESCO International Bureau of Education, 2013

    2013-01-01

    The International Bureau of Education (IBE) has compiled a "Glossary of Curriculum Terminology" offering definitions for over 180 terms related to the curriculum. It is also intended to be a working reference tool for specialists, educators and practitioners, and therefore feedback and suggestions are invited to help us to continue to…

  17. BEST: Next-Generation Biomedical Entity Search Tool for Knowledge Discovery from Biomedical Literature.

    Science.gov (United States)

    Lee, Sunwon; Kim, Donghyeon; Lee, Kyubum; Choi, Jaehoon; Kim, Seongsoon; Jeon, Minji; Lim, Sangrak; Choi, Donghee; Kim, Sunkyu; Tan, Aik-Choon; Kang, Jaewoo

    2016-01-01

    As the volume of publications rapidly increases, searching for relevant information from the literature becomes more challenging. To complement standard search engines such as PubMed, it is desirable to have an advanced search tool that directly returns relevant biomedical entities such as targets, drugs, and mutations rather than a long list of articles. Some existing tools submit a query to PubMed and process retrieved abstracts to extract information at query time, resulting in a slow response time and limited coverage of only a fraction of the PubMed corpus. Other tools preprocess the PubMed corpus to speed up the response time; however, they are not constantly updated, and thus produce outdated results. Further, most existing tools cannot process sophisticated queries such as searches for mutations that co-occur with query terms in the literature. To address these problems, we introduce BEST, a biomedical entity search tool. BEST returns, as a result, a list of 10 different types of biomedical entities including genes, diseases, drugs, targets, transcription factors, miRNAs, and mutations that are relevant to a user's query. To the best of our knowledge, BEST is the only system that processes free text queries and returns up-to-date results in real time including mutation information in the results. BEST is freely accessible at http://best.korea.ac.kr.

  18. INTERVIEW: Knowledge and Terminology Management at Crisplant

    DEFF Research Database (Denmark)

    Møller, Margrethe H.; Toft, Birthe

    2012-01-01

    Margrethe H. Møller interviews Lisbeth Kjeldgaard Almsten (translator/coauthor: Birthe Toft) “If you think that terminology work is simply a matter of buying terminology management software and getting started, you are in for trouble” At Crisplant, we have been doing terminology management...... for the past 20 years. Today, term bases are used not just for terminology-oriented term management. Recording other types of master data needed by all kinds of professionals in the enterprise is equally important. Within the past year, Crisplant has been acquired by the German BEUMER group, which means...... that the terminological resources of the two enterprises are in the process of being integrated. The challenges presented by this process demonstrate the importance of adhering to terminological principles when recording terminology resources, while at the same time reminding us what an essential discipline terminology...

  19. jQuery Pocket Reference

    CERN Document Server

    Flanagan, David

    2010-01-01

    "As someone who uses jQuery on a regular basis, it was surprising to discover how much of the library I'm not using. This book is indispensable for anyone who is serious about using jQuery for non-trivial applications."-- Raffaele Cecco, longtime developer of video games, including Cybernoid, Exolon, and Stormlord jQuery is the "write less, do more" JavaScript library. Its powerful features and ease of use have made it the most popular client-side JavaScript framework for the Web. This book is jQuery's trusty companion: the definitive "read less, learn more" guide to the library. jQuery P

  20. Instant jQuery selectors

    CERN Document Server

    De Rosa, Aurelio

    2013-01-01

    Filled with practical, step-by-step instructions and clear explanations for the most important and useful tasks. Instant jQuery Selectors follows a simple how-to format with recipes aimed at making you well versed with the wide range of selectors that jQuery has to offer through a myriad of examples.Instant jQuery Selectors is for web developers who want to delve into jQuery from its very starting point: selectors. Even if you're already familiar with the framework and its selectors, you could find several tips and tricks that you aren't aware of, especially about performance and how jQuery ac

  1. jQuery UI cookbook

    CERN Document Server

    Boduch, Adam

    2013-01-01

    Filled with a practical collection of recipes, jQuery UI Cookbook is full of clear, step-by-step instructions that will help you harness the powerful UI framework in jQuery. Depending on your needs, you can dip in and out of the Cookbook and its recipes, or follow the book from start to finish.If you are a jQuery UI developer looking to improve your existing applications, extract ideas for your new application, or to better understand the overall widget architecture, then jQuery UI Cookbook is a must-have for you. The reader should at least have a rudimentary understanding of what jQuery UI is

  2. Query expansion with a medical ontology to improve a multimodal information retrieval system.

    Science.gov (United States)

    Díaz-Galiano, M C; Martín-Valdivia, M T; Ureña-López, L A

    2009-04-01

    Searching biomedical information in a large collection of medical data is a complex task. The use of tools and biomedical resources could ease the retrieval of the information desired. In this paper, we use the medical ontology MeSH to improve a Multimodal Information Retrieval System by expanding the user's query with medical terms. In order to accomplish our experiments, we have used the dataset provided by ImageCLEFmed task organizers for years 2005 and 2006. This dataset is composed of a multimodal collection (images and text) of clinical cases, a list of queries for each year, and a list of relevance judgments for each query to evaluate the results. The results from the experiments show that the use of a medical ontology to expand the queries greatly improves the results.

  3. Query auto completion in information retrieval

    NARCIS (Netherlands)

    Cai, Fei

    2016-01-01

    Query auto completion is an important feature embedded into today's search engines. It can help users formulate queries which other people have searched for when he/she finishes typing the query prefix. Today's most sophisticated query auto completion approaches are based on the collected query logs

  4. 16 CFR 423.2 - Terminology.

    Science.gov (United States)

    2010-01-01

    ... 16 Commercial Practices 1 2010-01-01 2010-01-01 false Terminology. 423.2 Section 423.2 Commercial... CERTAIN PIECE GOODS AS AMENDED § 423.2 Terminology. (a) Any appropriate terms may be used on care labels... without terms. (c) The terminology set forth in appendix A may be used to fulfill the requirements of...

  5. In-context query reformulation for failing SPARQL queries

    Science.gov (United States)

    Viswanathan, Amar; Michaelis, James R.; Cassidy, Taylor; de Mel, Geeth; Hendler, James

    2017-05-01

    Knowledge bases for decision support systems are growing increasingly complex, through continued advances in data ingest and management approaches. However, humans do not possess the cognitive capabilities to retain a bird's-eyeview of such knowledge bases, and may end up issuing unsatisfiable queries to such systems. This work focuses on the implementation of a query reformulation approach for graph-based knowledge bases, specifically designed to support the Resource Description Framework (RDF). The reformulation approach presented is instance-and schema-aware. Thus, in contrast to relaxation techniques found in the state-of-the-art, the presented approach produces in-context query reformulation.

  6. Expanding user’s query with tag-neighbors for effective medical information retrieval

    DEFF Research Database (Denmark)

    Durao, Frederico; Bayyapu, Karunakar Reddy; Xu, Guandong;

    2014-01-01

    Medical information is a natural human demand. Existing search engines on the Web often are unable to handle medical search well because they do not consider its special requirements. Often a medical information searcher is uncertain about his exact questions and unfamiliar with medical terminology....... Under-specified queries often lead to undesirable search results that do not contain the information needed. To overcome the limitations of under-specified queries, we utilize tags to enhance information retrieval capabilities by expanding users’ original queries with context-relevant information. We...... compute a set of significant tag neighbor candidates based on the neighbor frequency and weight, and utilize the qualified tag neighbors to expand an entry query. The proposed approach is evaluated by using MedWorm medical article collection and results show considerable precision improvements over state...

  7. Medical Information Retrieval Enhanced with User's Query Expanded with Tag-Neighbors

    DEFF Research Database (Denmark)

    Durao, Frederico; Bayyapu, Karunakar Reddy; Xu, Guandong

    2013-01-01

    ’ original queries with context-relevant information. We compute a set of significant tag neighbor candidates based on the neighbor frequency and weight, and utilize the qualified tag neighbors to expand an entry query. The proposed approach is evaluated by using MedWorm medical article collection......Under-specified queries often lead to undesirable search results that do not contain the information needed. This problem gets worse when it comes to medical information, a natural human demand everywhere. Existing search engines on the Web often are unable to handle medical search well because...... they do not consider its special requirements. Often a medical information searcher is uncertain about his exact questions and unfamiliar with medical terminology. To overcome the limitations of under-specified queries, we utilize tags to enhance information retrieval capabilities by expanding users...

  8. The Query-commit Problem

    CERN Document Server

    Molinaro, Marco

    2011-01-01

    In the query-commit problem we are given a graph where edges have distinct probabilities of existing. It is possible to query the edges of the graph, and if the queried edge exists then its endpoints are irrevocably matched. The goal is to find a querying strategy which maximizes the expected size of the matching obtained. This stochastic matching setup is motivated by applications in kidney exchanges and online dating. In this paper we address the query-commit problem from both theoretical and experimental perspectives. First, we show that a simple class of edges can be queried without compromising the optimality of the strategy. This property is then used to obtain in polynomial time an optimal querying strategy when the input graph is sparse. Next we turn our attentions to the kidney exchange application, focusing on instances modeled over real data from existing exchange programs. We prove that, as the number of nodes grows, almost every instance admits a strategy which matches almost all nodes. This resu...

  9. Are ISO Terminology Standards Fit for Terminology Management at the NATO?

    OpenAIRE

    Steurs, Frieda; Kockaert, Hendrik

    2015-01-01

    NATO Conference on Terminology Management 19-20 November 2015 Are ISO Terminology Standards Fit for Terminology Management at the NATO? Hendrik J. Kockaert1,2 & Frieda Steurs1,2,3 KU Leuven1, University of the Free State2, UCO3 Abstract The NATO Terminology Office (NTO) advocates clear and unambiguous communication among its members and partners, following the NATO Policy for Standardization: "NATO documents must contain NATO agreed terminology." It is the NATO Termino...

  10. Multi-Dimensional Path Queries

    DEFF Research Database (Denmark)

    Bækgaard, Lars

    1998-01-01

    We present the path-relationship model that supports multi-dimensional data modeling and querying. A path-relationship database is composed of sets of paths and sets of relationships. A path is a sequence of related elements (atoms, paths, and sets of paths). A relationship is a binary path...... to create nested path structures. We present an SQL-like query language that is based on path expressions and we show how to use it to express multi-dimensional path queries that are suited for advanced data analysis in decision support environments like data warehousing environments...

  11. Recommendation Sets and Choice Queries

    DEFF Research Database (Denmark)

    Viappiani, Paolo Renato; Boutilier, Craig

    2011-01-01

    Utility elicitation is an important component of many applications, such as decision support systems and recommender systems. Such systems query users about their preferences and offer recommendations based on the system's belief about the user's utility function. We analyze the connection between...... the problem of generating optimal recommendation sets and the problem of generating optimal choice queries, considering both Bayesian and regret-based elicitation. Our results show that, somewhat surprisingly, under very general circumstances, the optimal recommendation set coincides with the optimal query....

  12. The role of economics in the QUERI program: QUERI Series

    Directory of Open Access Journals (Sweden)

    Smith Mark W

    2008-04-01

    Full Text Available Abstract Background The United States (U.S. Department of Veterans Affairs (VA Quality Enhancement Research Initiative (QUERI has implemented economic analyses in single-site and multi-site clinical trials. To date, no one has reviewed whether the QUERI Centers are taking an optimal approach to doing so. Consistent with the continuous learning culture of the QUERI Program, this paper provides such a reflection. Methods We present a case study of QUERI as an example of how economic considerations can and should be integrated into implementation research within both single and multi-site studies. We review theoretical and applied cost research in implementation studies outside and within VA. We also present a critique of the use of economic research within the QUERI program. Results Economic evaluation is a key element of implementation research. QUERI has contributed many developments in the field of implementation but has only recently begun multi-site implementation trials across multiple regions within the national VA healthcare system. These trials are unusual in their emphasis on developing detailed costs of implementation, as well as in the use of business case analyses (budget impact analyses. Conclusion Economics appears to play an important role in QUERI implementation studies, only after implementation has reached the stage of multi-site trials. Economic analysis could better inform the choice of which clinical best practices to implement and the choice of implementation interventions to employ. QUERI economics also would benefit from research on costing methods and development of widely accepted international standards for implementation economics.

  13. Standard terminology in the laboratory and classroom

    Science.gov (United States)

    Strehlow, Richard A.

    1992-01-01

    Each of the materials produced by modern technologists is associated with a family of immaterials--all the concepts of substance, process, and purpose. It is concepts that are essential to transfer knowledge. It is concepts that are the stuff of terminology. Terminology is standardized today by companies, standards organizations, governments, and other groups. Simply described, it is the pre-negotiation of the meanings of terms. Terminology has become a key issue in businesses, and terminology knowledge is essential in understanding the modern world. The following is a introductory workshop discussing the concepts of terminology and methods of its standardization.

  14. The genre tutorial and social networks terminology

    Directory of Open Access Journals (Sweden)

    Márcio Sales Santiago

    2014-02-01

    Full Text Available This paper analyzes the terminology in the Internet social networks tutorials. A tutorial is a specialized text, full of terms, aiming to teach an individual or group of individuals who need some guidelines to operationalize a computerized tool, such as a social network. It is necessary to identify linguistic and terminological characteristics from the specialized lexical units in this digital genre. Social networks terminology is described and exemplified here. The results show that it is possible to refer to two specific terminologies in tutorials which help to determine the terminological profile of the thematic area, specifically from the point of view of denomination.

  15. An Examination of Natural Language as a Query Formation Tool for Retrieving Information on E-Health from Pub Med.

    Science.gov (United States)

    Peterson, Gabriel M.; Su, Kuichun; Ries, James E.; Sievert, Mary Ellen C.

    2002-01-01

    Discussion of Internet use for information searches on health-related topics focuses on a study that examined complexity and variability of natural language in using search terms that express the concept of electronic health (e-health). Highlights include precision of retrieved information; shift in terminology; and queries using the Pub Med…

  16. A Systematic Review of Audiology Terminology.

    Science.gov (United States)

    Oh, Soo Hee; Lee, Junghak

    2016-09-01

    The present report provides an overview of terminology studies in audiology including topics and study characteristics, as well as categorizing the main issues. The goals are to improve the understanding of the current issues for terminology in audiology and to provide some basic information that will be useful to develop an international standard. Search procedures were completed over two phases. Phase 1 included a systematic electronic searches using MEDLINE (PubMed), Excerpta Medica Database, Cumulative Index to Nursing and Allied Health Literature, and International Organization for Standardization with keywords related to terminology of audiology. The studies were initially identified according to the titles of 2921 publications following careful abstract examination. Of these, whole texts of 16 publications were retrieved. Five papers met the inclusion criteria were further investigated. In phase 2, a manual search was conducted to collect additional publications with keywords related to terminology project in audiology. A total of 16 papers were found. The essential terminology issues classified included 'appropriateness,' 'classification/framework,' 'inconsistency of terminology,' 'multilingual and international aspects,' and 'service quality/delivery including communication and accessibility.' This was indicative of the paucity of terminology research in audiology, despite recurring terminology issues. Establishment of standardized terminology in audiology may minimize current challenging terminology issues by improving appropriateness and consistency of terminology as well as communication among relevant stakeholders at national and international levels.

  17. INTERVIEW: Knowledge and Terminology Management at Crisplant

    DEFF Research Database (Denmark)

    Møller, Margrethe H.; Toft, Birthe

    2012-01-01

    Margrethe H. Møller interviews Lisbeth Kjeldgaard Almsten (translator/coauthor: Birthe Toft) “If you think that terminology work is simply a matter of buying terminology management software and getting started, you are in for trouble” At Crisplant, we have been doing terminology management for th...... management really is, in enterprise practice as well as in education.......Margrethe H. Møller interviews Lisbeth Kjeldgaard Almsten (translator/coauthor: Birthe Toft) “If you think that terminology work is simply a matter of buying terminology management software and getting started, you are in for trouble” At Crisplant, we have been doing terminology management...... for the past 20 years. Today, term bases are used not just for terminology-oriented term management. Recording other types of master data needed by all kinds of professionals in the enterprise is equally important. Within the past year, Crisplant has been acquired by the German BEUMER group, which means...

  18. On chaos in bibliometric terminology

    OpenAIRE

    V. S. Lazarev; ЛАЗАРЕВ В.С.

    1996-01-01

    On behalf of a case study of articles on bibliometric selection and ranking the variance in terminology of the properties of journals is shown: the same properties are called in various manners, while one and the same terms have different meanings. Similar inconsistencies are found in the terms denoting readers’ activities which are studied in bibliometrics for the assessment of the use of periodicals. The author concludes that there are actually only two properties of periodicals that are qu...

  19. Terminology and forensic gait analysis.

    Science.gov (United States)

    Birch, Ivan; Vernon, Wesley; Walker, Jeremy; Young, Maria

    2015-07-01

    The use of appropriate terminology is a fundamental aspect of forensic gait analysis. The language used in forensic gait analysis is an amalgam of that used in clinical practice, podiatric biomechanics and the wider field of biomechanics. The result can often be a lack of consistency in the language used, the definitions used and the clarity of the message given. Examples include the use of 'gait' and 'walking' as synonymous terms, confusion between 'step' and 'stride', the mixing of anatomical, positional and pathological descriptors, and inability to describe appropriately movements of major body segments such as the torso. The purpose of this paper is to share the well-established definitions of the fundamental parameters of gait, common to all professions, and advocate their use in forensic gait analysis to establish commonality. The paper provides guidance on the selection and use of appropriate terminology in the description of gait in the forensic context. This paper considers the established definitions of the terms commonly used, identifies those terms which have the potential to confuse readers, and suggests a framework of terminology which should be utilised in forensic gait analysis.

  20. jQuery For Dummies

    CERN Document Server

    Beighley, Lynn

    2010-01-01

    Learn how jQuery can make your Web page or blog stand out from the crowd!. jQuery is free, open source software that allows you to extend and customize Joomla!, Drupal, AJAX, and WordPress via plug-ins. Assuming no previous programming experience, Lynn Beighley takes you through the basics of jQuery from the very start. You'll discover how the jQuery library separates itself from other JavaScript libraries through its ease of use, compactness, and friendliness if you're a beginner programmer. Written in the easy-to-understand style of the For Dummies brand, this book demonstrates how you can a

  1. XML Multidimensional Modelling and Querying

    CERN Document Server

    Boucher, Serge; Zimányi, Esteban

    2009-01-01

    As XML becomes ubiquitous and XML storage and processing becomes more efficient, the range of use cases for these technologies widens daily. One promising area is the integration of XML and data warehouses, where an XML-native database stores multidimensional data and processes OLAP queries written in the XQuery interrogation language. This paper explores issues arising in the implementation of such a data warehouse. We first compare approaches for multidimensional data modelling in XML, then describe how typical OLAP queries on these models can be expressed in XQuery. We then show how, regardless of the model, the grouping features of XQuery 1.1 improve performance and readability of these queries. Finally, we evaluate the performance of query evaluation in each modelling choice using the eXist database, which we extended with a grouping clause implementation.

  2. Schedule Sales Query Raw Data

    Data.gov (United States)

    General Services Administration — Schedule Sales Query presents sales volume figures as reported to GSA by contractors. The reports are generated as quarterly reports for the current year and the...

  3. A Practical Approach for Scalable Conjunctive Query Answering on Acyclic {EL}^+ Knowledge Base

    Science.gov (United States)

    Mei, Jing; Liu, Shengping; Xie, Guotong; Kalyanpur, Aditya; Fokoue, Achille; Ni, Yuan; Li, Hanyu; Pan, Yue

    Conjunctive query answering for {EL}^{++} ontologies has recently drawn much attention, as the Description Logic {EL}^{++} captures the expressivity of many large ontologies in the biomedical domain and is the foundation for the OWL 2 EL profile. In this paper, we propose a practical approach for conjunctive query answering in a fragment of {EL}^{++}, namely acyclic {EL}^+, that supports role inclusions. This approach can be implemented with low cost by leveraging any existing relational database management system to do the ABox data completion and query answering. We conducted a preliminary experiment to evaluate our approach using a large clinical data set and show our approach is practical.

  4. Biomedical photonics handbook biomedical diagnostics

    CERN Document Server

    Vo-Dinh, Tuan

    2014-01-01

    Shaped by Quantum Theory, Technology, and the Genomics RevolutionThe integration of photonics, electronics, biomaterials, and nanotechnology holds great promise for the future of medicine. This topic has recently experienced an explosive growth due to the noninvasive or minimally invasive nature and the cost-effectiveness of photonic modalities in medical diagnostics and therapy. The second edition of the Biomedical Photonics Handbook presents fundamental developments as well as important applications of biomedical photonics of interest to scientists, engineers, manufacturers, teachers, studen

  5. Ontological Queries: Rewriting and Optimization (Extended Version)

    CERN Document Server

    Gottlob, Georg; Pieris, Andreas

    2011-01-01

    Ontological queries are evaluated against an ontology rather than directly on a database. The evaluation and optimization of such queries is an intriguing new problem for database research. In this paper we discuss two important aspects of this problem: query rewriting and query optimization. Query rewriting consists of the compilation of an ontological query into an equivalent query against the underlying relational database. The focus here is on soundness and completeness. We review previous results and present a new rewriting algorithm for rather general types of ontological constraints. In particular, we show how a conjunctive query against an ontology can be compiled into a union of conjunctive queries against the underlying database. Ontological query optimization, in this context, attempts to improve this process so to produce possibly small and cost-effective UCQ rewritings for an input query. We review existing optimization methods, and propose an effective new method that works for linear Datalog+/-...

  6. Biomedical nanotechnology.

    Science.gov (United States)

    Hurst, Sarah J

    2011-01-01

    This chapter summarizes the roles of nanomaterials in biomedical applications, focusing on those highlighted in this volume. A brief history of nanoscience and technology and a general introduction to the field are presented. Then, the chemical and physical properties of nanostructures that make them ideal for use in biomedical applications are highlighted. Examples of common applications, including sensing, imaging, and therapeutics, are given. Finally, the challenges associated with translating this field from the research laboratory to the clinic setting, in terms of the larger societal implications, are discussed.

  7. Improved query difficulty prediction for the web

    NARCIS (Netherlands)

    Hauff, C.; Murdock, V.; Baeza-Yates, R.

    2008-01-01

    Query performance prediction aims to predict whether a query will have a high average precision given retrieval from a particular collection, or low average precision. An accurate estimator of the quality of search engine results can allow the search engine to decide to which queries to apply query

  8. Effective Density Queries of Continuously Moving Objects

    DEFF Research Database (Denmark)

    Jensen, Christian Søndergaard; Lin, D.; Ooi, B.C.

    2006-01-01

    In this paper, we study a newly emerging type of queries on moving objects - the density query. Basically, this query locates regions in the data space where the density of the objects is high. This type of queries is especially useful in Location Based Services (LBS). For example, in a traffic...

  9. Socially Induced Changes in Legal Terminology

    Directory of Open Access Journals (Sweden)

    Matulewska Aleksandra

    2017-03-01

    Full Text Available The author intends to present evolutionary and revolutionary changes in legal terminology. Legal terminology changes as a result of language usage, technological development, political and social changes and even economy reasons. The following research methods have been applied: the terminological analysis of the research material (empirical observation, analysis of comparable texts and parametric approach to legal terminology comparison and the analysis of pertinent literature. The research material included legislation from the United Kingdom, the United States of America, Canada and Australia. The author focuses on terminological changes resulting from social transformations. Selected terms and their transformation in respect to meaning and form are elaborated on in the paper. Finally, the author draws conclusions that translation of such terminology should aim at communication precision and many of them may be false friends in interlingual communication.

  10. Privacy Preserving Moving KNN Queries

    CERN Document Server

    Hashem, Tanzima; Zhang, Rui

    2011-01-01

    We present a novel approach that protects trajectory privacy of users who access location-based services through a moving k nearest neighbor (MkNN) query. An MkNN query continuously returns the k nearest data objects for a moving user (query point). Simply updating a user's imprecise location such as a region instead of the exact position to a location-based service provider (LSP) cannot ensure privacy of the user for an MkNN query: continuous disclosure of regions enables the LSP to follow a user's trajectory. We identify the problem of trajectory privacy that arises from the overlap of consecutive regions while requesting an MkNN query and provide the first solution to this problem. Our approach allows a user to specify the confidence level that represents a bound of how much more the user may need to travel than the actual kth nearest data object. By hiding a user's required confidence level and the required number of nearest data objects from an LSP, we develop a technique to prevent the LSP from tracking...

  11. Dynamic Planar Range Maxima Queries

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Tsakalidis, Konstantinos

    2011-01-01

    We consider the dynamic two-dimensional maxima query problem. Let P be a set of n points in the plane. A point is maximal if it is not dominated by any other point in P. We describe two data structures that support the reporting of the t maximal points that dominate a given query point, and allow...... update time, using O(nlogn) space, where t is the size of the output. This improves the worst case deletion time of the dynamic rectangular visibility query problem from O(log^3 n) to O(log^2 n). We adapt the data structure to the RAM model with word size w, where the coordinates of the points...... in the worst case. The data structure also supports the more general query of reporting the maximal points among the points that lie in a given 3-sided orthogonal range unbounded from above in the same complexity. We can support 4-sided queries in O(log^2 n + t) worst case time, and O(log^2 n) worst case...

  12. Bottom-up mining of XML query patterns to improve XML querying

    Institute of Scientific and Technical Information of China (English)

    Yi-jun BEI; Gang CHEN; Jin-xiang DONG; Ke CHEN

    2008-01-01

    Querying XML data is a computationally expensive process due to the complex nature of both the XML data and the XML queries. In this paper we propose an approach to expedite XML query processing by caching the results of frequent queries. We discover frequent query patterns from user-issued queries using an efficient bottom-up mining approach called VBUXMiner. VBUXMiner consists of two main steps. First, all queries are merged into a summary structure named "compressed global tree guide" (CGTG). Second, a bottom-up traversal scheme based on the CGTG is employed to generate frequent query patterns. We use the frequent query patterns in a cache mechanism to improve the XML query performance. Experimental results show that our proposed mining approach outperforms the previous mining algorithms for XML queries, such as XQPMinerTID and FastXMiner, and that by caching the results of frequent query patterns, XML query performance can be dramatically improved.

  13. Biomedical Engineering

    CERN Document Server

    Suh, Sang C; Tanik, Murat M

    2011-01-01

    Biomedical Engineering: Health Care Systems, Technology and Techniques is an edited volume with contributions from world experts. It provides readers with unique contributions related to current research and future healthcare systems. Practitioners and researchers focused on computer science, bioinformatics, engineering and medicine will find this book a valuable reference.

  14. Biomedical Libraries

    Science.gov (United States)

    Pizer, Irwin H.

    1978-01-01

    Biomedical libraries are discussed as a distinct and specialized group of special libraries and their unique services and user interactions are described. The move toward professional standards, as evidenced by the Medical Library Association's new certification program, and the current state of development for a new section of IFLA established…

  15. Evaluation of research in biomedical ontologies

    Science.gov (United States)

    Dumontier, Michel; Gkoutos, Georgios V.

    2013-01-01

    Ontologies are now pervasive in biomedicine, where they serve as a means to standardize terminology, to enable access to domain knowledge, to verify data consistency and to facilitate integrative analyses over heterogeneous biomedical data. For this purpose, research on biomedical ontologies applies theories and methods from diverse disciplines such as information management, knowledge representation, cognitive science, linguistics and philosophy. Depending on the desired applications in which ontologies are being applied, the evaluation of research in biomedical ontologies must follow different strategies. Here, we provide a classification of research problems in which ontologies are being applied, focusing on the use of ontologies in basic and translational research, and we demonstrate how research results in biomedical ontologies can be evaluated. The evaluation strategies depend on the desired application and measure the success of using an ontology for a particular biomedical problem. For many applications, the success can be quantified, thereby facilitating the objective evaluation and comparison of research in biomedical ontology. The objective, quantifiable comparison of research results based on scientific applications opens up the possibility for systematically improving the utility of ontologies in biomedical research. PMID:22962340

  16. Evaluation of research in biomedical ontologies.

    Science.gov (United States)

    Hoehndorf, Robert; Dumontier, Michel; Gkoutos, Georgios V

    2013-11-01

    Ontologies are now pervasive in biomedicine, where they serve as a means to standardize terminology, to enable access to domain knowledge, to verify data consistency and to facilitate integrative analyses over heterogeneous biomedical data. For this purpose, research on biomedical ontologies applies theories and methods from diverse disciplines such as information management, knowledge representation, cognitive science, linguistics and philosophy. Depending on the desired applications in which ontologies are being applied, the evaluation of research in biomedical ontologies must follow different strategies. Here, we provide a classification of research problems in which ontologies are being applied, focusing on the use of ontologies in basic and translational research, and we demonstrate how research results in biomedical ontologies can be evaluated. The evaluation strategies depend on the desired application and measure the success of using an ontology for a particular biomedical problem. For many applications, the success can be quantified, thereby facilitating the objective evaluation and comparison of research in biomedical ontology. The objective, quantifiable comparison of research results based on scientific applications opens up the possibility for systematically improving the utility of ontologies in biomedical research.

  17. Terminology of psychogenic nonepileptic seizures.

    Science.gov (United States)

    Brigo, Francesco; Igwe, Stanley C; Ausserer, Harald; Nardone, Raffaele; Tezzon, Frediano; Bongiovanni, Luigi Giuseppe; Tinazzi, Michele; Trinka, Eugen

    2015-03-01

    Several different terms have been used to describe "psychogenic nonepileptic seizures" (PNES) in the literature. In this study, we evaluated the most common English terms used to describe PNES on Google and in PubMed using multiple search terms (https://www.google.com and http://www.ncbi.nlm.nih.gov/pubmed). The information prevalence of the five terms most frequently used to refer to PNES in PubMed were: psychogenic non(-)epileptic seizure(s), followed by pseudo(-)seizure(s), non(-)epileptic seizure(s), psychogenic seizure(s), and non(-)epileptic event(s). The five most frequently adopted terms to describe PNES in Google were: psychogenic non(-)epileptic seizure(s), followed by non(-)epileptic event(s), psychogenic attack(s), non(-)epileptic attack(s), and psychogenic non(-)epileptic attack(s). The broad spectrum of synonyms used to refer to PNES in the medical literature reflects a lack of internationally accepted, uniform terminology for PNES. In addition to "seizure(s)," lay people use the word "attack(s)" to describe PNES. Although considered obsolete, some terms, e.g., pseudoseizure(s), are still used in the recent medical literature. Adopting a uniform terminology to describe PNES could facilitate communication between epileptologists, physicians without specific expertise in epilepsy, and patients.

  18. Condorcet query engine: A query engine for coordinated index terms

    NARCIS (Netherlands)

    van der Vet, P.E.; Mars, Nicolaas

    1999-01-01

    On-line information retrieval systems often offer their users some means to tune the query to match the level of granularity of the information request. Users can be offered a far greater range of possibilities, however, if documents are indexed with coordinated index concepts. Coordinated index

  19. Head First jQuery

    CERN Document Server

    Benedetti, Ryan

    2011-01-01

    Want to add more interactivity and polish to your websites? Discover how jQuery can help you build complex scripting functionality in just a few lines of code. With Head First jQuery, you'll quickly get up to speed on this amazing JavaScript library by learning how to navigate HTML documents while handling events, effects, callbacks, and animations. By the time you've completed the book, you'll be incorporating Ajax apps, working seamlessly with HTML and CSS, and handling data with PHP, MySQL and JSON. If you want to learn-and understand-how to create interactive web pages, unobtrusive scrip

  20. Querying and Manipulating Temporal Databases

    Directory of Open Access Journals (Sweden)

    Mohamed Mkaouar

    2011-03-01

    Full Text Available Many works have focused, for over twenty five years, on the integration of the time dimension indatabases (DB. However, the standard SQL3 does not yet allow easy definition, manipulation andquerying of temporal DBs. In this paper, we study how we can simplify querying and manipulatingtemporal facts in SQL3, using a model that integrates time in a native manner. To do this, we proposenew keywords and syntax to define different temporal versions for many relational operators andfunctions used in SQL. It then becomes possible to perform various queries and updates appropriate totemporal facts. We illustrate the use of these proposals on many examples from a real application.

  1. Medical case-based retrieval: integrating query MeSH terms for query-adaptive multi-modal fusion

    Science.gov (United States)

    Seco de Herrera, Alba G.; Foncubierta-Rodríguez, Antonio; Müller, Henning

    2015-03-01

    Advances in medical knowledge give clinicians more objective information for a diagnosis. Therefore, there is an increasing need for bibliographic search engines that can provide services helping to facilitate faster information search. The ImageCLEFmed benchmark proposes a medical case-based retrieval task. This task aims at retrieving articles from the biomedical literature that are relevant for differential diagnosis of query cases including a textual description and several images. In the context of this campaign many approaches have been investigated showing that the fusion of visual and text information can improve the precision of the retrieval. However, fusion does not always lead to better results. In this paper, a new query-adaptive fusion criterion to decide when to use multi-modal (text and visual) or only text approaches is presented. The proposed method integrates text information contained in MeSH (Medical Subject Headings) terms extracted and visual features of the images to find synonym relations between them. Given a text query, the query-adaptive fusion criterion decides when it is suitable to also use visual information for the retrieval. Results show that this approach can decide if a text or multi{modal approach should be used with 77.15% of accuracy.

  2. Improving accuracy for identifying related PubMed queries by an integrated approach.

    Science.gov (United States)

    Lu, Zhiyong; Wilbur, W John

    2009-10-01

    PubMed is the most widely used tool for searching biomedical literature online. As with many other online search tools, a user often types a series of multiple related queries before retrieving satisfactory results to fulfill a single information need. Meanwhile, it is also a common phenomenon to see a user type queries on unrelated topics in a single session. In order to study PubMed users' search strategies, it is necessary to be able to automatically separate unrelated queries and group together related queries. Here, we report a novel approach combining both lexical and contextual analyses for segmenting PubMed query sessions and identifying related queries and compare its performance with the previous approach based solely on concept mapping. We experimented with our integrated approach on sample data consisting of 1539 pairs of consecutive user queries in 351 user sessions. The prediction results of 1396 pairs agreed with the gold-standard annotations, achieving an overall accuracy of 90.7%. This demonstrates that our approach is significantly better than the previously published method. By applying this approach to a one day query log of PubMed, we found that a significant proportion of information needs involved more than one PubMed query, and that most of the consecutive queries for the same information need are lexically related. Finally, the proposed PubMed distance is shown to be an accurate and meaningful measure for determining the contextual similarity between biological terms. The integrated approach can play a critical role in handling real-world PubMed query log data as is demonstrated in our experiments.

  3. Preference Elicitation in Prioritized Skyline Queries

    CERN Document Server

    Mindolin, Denis

    2010-01-01

    Preference queries incorporate the notion of binary preference relation into relational database querying. Instead of returning all the answers, such queries return only the best answers, according to a given preference relation. Preference queries are a fast growing area of database research. Skyline queries constitute one of the most thoroughly studied classes of preference queries. A well known limitation of skyline queries is that skyline preference relations assign the same importance to all attributes. In this work, we study p-skyline queries that generalize skyline queries by allowing varying attribute importance in preference relations. We perform an in-depth study of the properties of p-skyline preference relations. In particular,we study the problems of containment and minimal extension. We apply the obtained results to the central problem of the paper: eliciting relative importance of attributes. Relative importance is implicit in the constructed p-skyline preference relation. The elicitation is ba...

  4. Scalable Social Coordination using Enmeshed Queries

    CERN Document Server

    Chen, Jianjun; Varghese, George

    2012-01-01

    Social coordination allows users to move beyond awareness of their friends to efficiently coordinating physical activities with others. While specific forms of social coordination can be seen in tools such as Evite, Meetup and Groupon, we introduce a more general model using what we call {\\em enmeshed queries}. An enmeshed query allows users to declaratively specify an intent to coordinate by specifying social attributes such as the desired group size and who/what/when, and the database returns matching queries. Enmeshed queries are continuous, but new queries (and not data) answer older queries; the variable group size also makes enmeshed queries different from entangled queries, publish-subscribe systems, and dating services. We show that even offline group coordination using enmeshed queries is NP-hard. We then introduce efficient heuristics that use selective indices such as location and time to reduce the space of possible matches; we also add refinements such as delayed evaluation and using the relative...

  5. Integrating systems biology models and biomedical ontologies

    Directory of Open Access Journals (Sweden)

    de Bono Bernard

    2011-08-01

    Full Text Available Abstract Background Systems biology is an approach to biology that emphasizes the structure and dynamic behavior of biological systems and the interactions that occur within them. To succeed, systems biology crucially depends on the accessibility and integration of data across domains and levels of granularity. Biomedical ontologies were developed to facilitate such an integration of data and are often used to annotate biosimulation models in systems biology. Results We provide a framework to integrate representations of in silico systems biology with those of in vivo biology as described by biomedical ontologies and demonstrate this framework using the Systems Biology Markup Language. We developed the SBML Harvester software that automatically converts annotated SBML models into OWL and we apply our software to those biosimulation models that are contained in the BioModels Database. We utilize the resulting knowledge base for complex biological queries that can bridge levels of granularity, verify models based on the biological phenomenon they represent and provide a means to establish a basic qualitative layer on which to express the semantics of biosimulation models. Conclusions We establish an information flow between biomedical ontologies and biosimulation models and we demonstrate that the integration of annotated biosimulation models and biomedical ontologies enables the verification of models as well as expressive queries. Establishing a bi-directional information flow between systems biology and biomedical ontologies has the potential to enable large-scale analyses of biological systems that span levels of granularity from molecules to organisms.

  6. Integrating systems biology models and biomedical ontologies

    Science.gov (United States)

    2011-01-01

    Background Systems biology is an approach to biology that emphasizes the structure and dynamic behavior of biological systems and the interactions that occur within them. To succeed, systems biology crucially depends on the accessibility and integration of data across domains and levels of granularity. Biomedical ontologies were developed to facilitate such an integration of data and are often used to annotate biosimulation models in systems biology. Results We provide a framework to integrate representations of in silico systems biology with those of in vivo biology as described by biomedical ontologies and demonstrate this framework using the Systems Biology Markup Language. We developed the SBML Harvester software that automatically converts annotated SBML models into OWL and we apply our software to those biosimulation models that are contained in the BioModels Database. We utilize the resulting knowledge base for complex biological queries that can bridge levels of granularity, verify models based on the biological phenomenon they represent and provide a means to establish a basic qualitative layer on which to express the semantics of biosimulation models. Conclusions We establish an information flow between biomedical ontologies and biosimulation models and we demonstrate that the integration of annotated biosimulation models and biomedical ontologies enables the verification of models as well as expressive queries. Establishing a bi-directional information flow between systems biology and biomedical ontologies has the potential to enable large-scale analyses of biological systems that span levels of granularity from molecules to organisms. PMID:21835028

  7. Semantator: semantic annotator for converting biomedical text to linked data.

    Science.gov (United States)

    Tao, Cui; Song, Dezhao; Sharma, Deepak; Chute, Christopher G

    2013-10-01

    More than 80% of biomedical data is embedded in plain text. The unstructured nature of these text-based documents makes it challenging to easily browse and query the data of interest in them. One approach to facilitate browsing and querying biomedical text is to convert the plain text to a linked web of data, i.e., converting data originally in free text to structured formats with defined meta-level semantics. In this paper, we introduce Semantator (Semantic Annotator), a semantic-web-based environment for annotating data of interest in biomedical documents, browsing and querying the annotated data, and interactively refining annotation results if needed. Through Semantator, information of interest can be either annotated manually or semi-automatically using plug-in information extraction tools. The annotated results will be stored in RDF and can be queried using the SPARQL query language. In addition, semantic reasoners can be directly applied to the annotated data for consistency checking and knowledge inference. Semantator has been released online and was used by the biomedical ontology community who provided positive feedbacks. Our evaluation results indicated that (1) Semantator can perform the annotation functionalities as designed; (2) Semantator can be adopted in real applications in clinical and transactional research; and (3) the annotated results using Semantator can be easily used in Semantic-web-based reasoning tools for further inference.

  8. Query Expansion Using Heterogeneous Thesauri.

    Science.gov (United States)

    Mandala, Rila; Tokunaga, Takenobu; Tanaka, Hozumi

    2000-01-01

    Proposes a method to improve the performance of information retrieval systems by expanding queries using heterogeneous thesauri. Experiments show that using heterogeneous thesauri with an appropriate weighting method results in better retrieval performance than using only one type of thesaurus. (Author/LRW)

  9. Accomplishing Deterministic XML Query Optimization

    Institute of Scientific and Technical Information of China (English)

    Dun-Ren Che

    2005-01-01

    As the popularity of XML (eXtensible Markup Language) keeps growing rapidly, the management of XML compliant structured-document databases has become a very interesting and compelling research area. Query optimization for XML structured-documents stands out as one of the most challenging research issues in this area because of the much enlarged optimization (search) space, which is a consequence of the intrinsic complexity of the underlying data model of XML data. We therefore propose to apply deterministic transformations on query expressions to most aggressively prune the search space and fast achieve a sufficiently improved alternative (if not the optimal) for each incoming query expression. This idea is not just exciting but practically attainable. This paper first provides an overview of our optimization strategy, and then focuses on the key implementation issues of our rule-based transformation system for XML query optimization in a database environment. The performance results we obtained from experimentation show that our approach is a valid and effective one.

  10. Query Expansion Using Heterogeneous Thesauri.

    Science.gov (United States)

    Mandala, Rila; Tokunaga, Takenobu; Tanaka, Hozumi

    2000-01-01

    Proposes a method to improve the performance of information retrieval systems by expanding queries using heterogeneous thesauri. Experiments show that using heterogeneous thesauri with an appropriate weighting method results in better retrieval performance than using only one type of thesaurus. (Author/LRW)

  11. Querying Large Biological Network Datasets

    Science.gov (United States)

    Gulsoy, Gunhan

    2013-01-01

    New experimental methods has resulted in increasing amount of genetic interaction data to be generated every day. Biological networks are used to store genetic interaction data gathered. Increasing amount of data available requires fast large scale analysis methods. Therefore, we address the problem of querying large biological network datasets.…

  12. Explanations for Skyline Query Results

    DEFF Research Database (Denmark)

    Chester, Sean; Assent, Ira

    2015-01-01

    Skyline queries are a well-studied problem for multidimensional data, wherein points are returned to the user iff no other point is preferable across all attributes. This leaves only the points most likely to appeal to an arbitrary user. However, some dominated points may still be interesting, an...

  13. Logical Querying of Relational Databases

    Directory of Open Access Journals (Sweden)

    Luminita Pistol

    2016-12-01

    Full Text Available This paper aims to demonstrate the usefulness of formal logic and lambda calculus in database programming. After a short introduction in propositional and first order logic, we implement dynamically a small database and translate some SQL queries in filtered java 8 streams, enhanced with Tuples facilities from jOOλ library.

  14. Enhancing Recall in Semantic Querying

    DEFF Research Database (Denmark)

    Rouces, Jacobo

    2013-01-01

    RDF and SPARQL are currently state-of-the-art W3C standards to respectively represent and query structured information, especially when information from different sources must be federated. However, there are various reasons for which the same knowledge can be modeled in RDF graphs that are both ...

  15. 49 CFR 579.4 - Terminology.

    Science.gov (United States)

    2010-10-01

    ... 49 Transportation 7 2010-10-01 2010-10-01 false Terminology. 579.4 Section 579.4 Transportation... General § 579.4 Terminology. (a) Statutory terms. The terms dealer, defect, distributor, motor vehicle... reasonable prospect of litigation and not for some other purpose such as a business practice, and prepared...

  16. Multilingual Rehabilitation Terminology. A Preliminary Study.

    Science.gov (United States)

    Wagner. , Elizabeth M.

    In rehabilitation, the team approach demands harmonious communication among practitioners of many professions and occupations at many different levels. Technical terminology needs to be concurrently understood or able to be explained easily. Although rehabilitation terminology is still somewhat in a state of flux, enough terms have been identified…

  17. 49 CFR 572.4 - Terminology.

    Science.gov (United States)

    2010-10-01

    ... 49 Transportation 7 2010-10-01 2010-10-01 false Terminology. 572.4 Section 572.4 Transportation Other Regulations Relating to Transportation (Continued) NATIONAL HIGHWAY TRAFFIC SAFETY ADMINISTRATION, DEPARTMENT OF TRANSPORTATION (CONTINUED) ANTHROPOMORPHIC TEST DEVICES General § 572.4 Terminology. (a)...

  18. 29 CFR 96.1 - Terminology.

    Science.gov (United States)

    2010-07-01

    ... 29 Labor 1 2010-07-01 2010-07-01 true Terminology. 96.1 Section 96.1 Labor Office of the Secretary of Labor AUDIT REQUIREMENTS FOR GRANTS, CONTRACTS, AND OTHER AGREEMENTS § 96.1 Terminology. As used in this part, the terms “Federal award,” “Federal financial assistance,” “recipient,”...

  19. 21 CFR 25.5 - Terminology.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 1 2010-04-01 2010-04-01 false Terminology. 25.5 Section 25.5 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES GENERAL ENVIRONMENTAL IMPACT CONSIDERATIONS General Provisions § 25.5 Terminology. (a) Definitions that apply to the terms used in this...

  20. 9 CFR 101.4 - Labeling terminology.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Labeling terminology. 101.4 Section 101.4 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF... Labeling terminology. Terms pertaining to identification and packaging of biological products shall...

  1. 42 CFR 422.252 - Terminology.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 3 2010-10-01 2010-10-01 false Terminology. 422.252 Section 422.252 Public Health CENTERS FOR MEDICARE & MEDICAID SERVICES, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICARE... § 422.252 Terminology. Annual MA capitation rate means a county payment rate for an MA local...

  2. 9 CFR 101.5 - Testing terminology.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Testing terminology. 101.5 Section 101.5 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE... terminology. Terms used when evaluating biological products shall mean: (a) Standard Requirement. Test...

  3. 24 CFR 55.2 - Terminology.

    Science.gov (United States)

    2010-04-01

    ... FLOODPLAIN MANAGEMENT General § 55.2 Terminology. (a) With the exception of those terms defined in paragraph... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Terminology. 55.2 Section 55.2... of Executive Order 11988 and in the Floodplain Management Guidelines for Implementing Executive...

  4. Biomedical Materials

    Institute of Scientific and Technical Information of China (English)

    CHANG Jiang; ZHOU Yanling

    2011-01-01

    @@ Biomedical materials, biomaterials for short, is regarded as "any substance or combination of substances, synthetic or natural in origin, which can be used for any period of time, as a whole or as part of a system which treats, augments, or replaces any tissue, organ or function of the body" (Vonrecum & Laberge, 1995).Biomaterials can save lives, relieve suffering and enhance the quality of life for human being.

  5. ON THE TERMINOLOGY OF SPONDYLOARTHRITIS

    Directory of Open Access Journals (Sweden)

    Sh. F. Erdes

    2015-01-01

    Full Text Available By the end of the first decade of the 21st century, spondyloarthritis studies have accumulated a certain number of terms that are obsolete, but used by physicians in their everyday speech, on the one hand, and a great variety of different definitions, on the other hand. In January 2014, the first organizational meeting of the Expert Group on Spondyloarthritis, Association of Rheumatologists of Russia, decided that its primary task should be to order the terminology used in this area. The authors primarily collected the terms, which had been already used in medical vocabulary, and then divided them into two categories: obsolete definitions and terms to be finalized and unified. This publication gives guidelines for using the medical terms relevant to spondyloarthritis and separately discusses how to correctly write the term sacroiliitis.

  6. Large Catalogue Query Performance in Relational Databases

    Science.gov (United States)

    Power, Robert A.

    2007-05-01

    The performance of the mysql and oracle database systems have been compared for a selection of astronomy queries using large catalogues of up to a billion objects. The queries tested are those expected from the astronomy community: general database queries, cone searches, neighbour finding and cross matching. The catalogue preparation, sql query formulation and database performance is presented. Most of the general queries perform adequately when appropriate indexes are present in the database. Each system performs well for cone search queries when the Hierarchical Triangular Mesh spatial index is used. Neighbour finding and cross matching are not well supported in a database environment when compared to software specifically developed to solve these problems.

  7. Optimizing Temporal Queries: Efficient Handling of Duplicates

    DEFF Research Database (Denmark)

    Toman, David; Bowman, Ivan Thomas

    2001-01-01

    Recent research in the area of temporal databases has proposed a number of query languages that vary in their expressive power and the semantics they provide to users. These query languages represent a spectrum of solutions to the tension between clean semantics and efficient evaluation. Often......, these query languages are implemented by translating temporal queries into standard relational queries. However, the compiled queries are often quite cumbersome and expensive to execute even using state-of-the- art relational products. This paper presents an optimization technique that produces more efficient...... translated SQL queries by taking into account the properties of the encoding used for temporal attributes. For concreteness, this translation technique is presented in the context of SQL/TP; however, these techniques are also applicable to other temporal query languages....

  8. Optimizing Temporal Queries: Efficient Handling of Duplicates

    DEFF Research Database (Denmark)

    Toman, David; Bowman, Ivan Thomas

    2001-01-01

    translated SQL queries by taking into account the properties of the encoding used for temporal attributes. For concreteness, this translation technique is presented in the context of SQL/TP; however, these techniques are also applicable to other temporal query languages......., these query languages are implemented by translating temporal queries into standard relational queries. However, the compiled queries are often quite cumbersome and expensive to execute even using state-of-the- art relational products. This paper presents an optimization technique that produces more efficient......Recent research in the area of temporal databases has proposed a number of query languages that vary in their expressive power and the semantics they provide to users. These query languages represent a spectrum of solutions to the tension between clean semantics and efficient evaluation. Often...

  9. Format SPARQL Query Results into HTML Report

    Directory of Open Access Journals (Sweden)

    Dr Sunitha Abburu

    2013-07-01

    Full Text Available SPARQL is one of the powerful query language for querying semantic data. It is recognized by the W3C as a query language for RDF. As an efficient query language for RDF, it has defined several query result formats such as CSV, TSV and XML etc. These formats are not attractive, understandable and readable. The results need to be converted in an appropriate format so that user can easily understand. The above formats require additional transformations or tool support to represent the query result in user readable format. The main aim of this paper is to propose a method to build HTML report dynamically for SPARQL query results. This enables SPARQL query result display, in HTML report format easily, in an attractive understandable format without the support of any additional or external tools or transformation.

  10. Identifying Aspects for Web-Search Queries

    OpenAIRE

    Wu, Fei; Madhavan, Jayant; Halevy, Alon

    2014-01-01

    Many web-search queries serve as the beginning of an exploration of an unknown space of information, rather than looking for a specific web page. To answer such queries effec- tively, the search engine should attempt to organize the space of relevant information in a way that facilitates exploration. We describe the Aspector system that computes aspects for a given query. Each aspect is a set of search queries that together represent a distinct information need relevant to the original search...

  11. Broadcast-Based Spatial Queries

    Institute of Scientific and Technical Information of China (English)

    Kwang-Jin Park; Moon-Bae Song; Chong-Sun Hwang

    2005-01-01

    Indexing techniques have been developed for wireless data broadcast environments, in order to conserve the scarce power resources of the mobile clients. However, the use of interleaved index segments in a broadcast cycle increases the average access latency for the clients. In this paper, the broadcast-based spatial query processing methods (BBS)are presented for the location-based services. In the BBS, broadcasted data objects are sorted sequentially based on their locations, and the server broadcasts the location dependent data along with an index segment. Then, a sequential prefetching and caching scheme is designed to reduce the query response time. The performance of this scheme is investigated in relation to various environmental variables, such as the distributions of the data objects, the average speed of the clients and the size of the service area.

  12. Querying Sentiment Development over Time

    DEFF Research Database (Denmark)

    Andreasen, Troels; Christiansen, Henning; Have, Christian Theil

    2013-01-01

    A new language is introduced for describing hypotheses about fluctuations of measurable properties in streams of timestamped data, and as prime example, we consider trends of emotions in the constantly flowing stream of Twitter messages. The language, called EmoEpisodes, has a precise semantics...... that measures how well a hypothesis characterizes a given time interval; the semantics is parameterized so it can be adjusted to different views of the data. EmoEpisodes is extended to a query language with variables standing for unknown topics and emotions, and the query-answering mechanism will return...... instantiations for topics and emotions as well as time intervals that provide the largest deflections in this measurement. Experiments are performed on a selection of Twitter data to demonstrates the usefulness of the approach....

  13. Lightweight query authentication on streams

    OpenAIRE

    2014-01-01

    We consider a stream outsourcing setting, where a data owner delegates the management of a set of disjoint data streams to an untrusted server. The owner authenticates his streams via signatures. The server processes continuous queries on the union of the streams for clients trusted by the owner. Along with the results, the server sends proofs of result correctness derived from the owner's signatures, which are easily verifiable by the clients. We design novel constructions for a collection o...

  14. Building interactive queries with LINQPad

    CERN Document Server

    Finot, Sébastien

    2013-01-01

    A step-by-step practical guide that will introduce you to LINQPad's key features, thereby helping you to query databases interactively.This book is aimed at C#/.Net developers who wish to learn LINQ programming and leverage the easy way of using LINQPad. No prior knowledge of LINQ or LINQPad is expected. A basic knowledge of SQL and XML is required for some chapters.

  15. Flexible Query Answering Systems 2006

    DEFF Research Database (Denmark)

    submissions, relating to the topic of users posing queries and systems producing answers. The papers cover the fields: Database Management, Information Retrieval, Domain Modeling, Knowledge Representation and Ontologies, Knowledge Discovery and Data Mining, Artificial Intelligence, Classical and Non......-classical Logics, Computational Linguistics and Natural Language Processing, Multimedia Information Systems, and Human--Computer Interaction, including reports of interesting applications. We wish to thank the contributors for their excellent papers and the referees, publisher, and sponsors for their effort...

  16. SCRY: Enabling quantitative reasoning in SPARQL queries

    NARCIS (Netherlands)

    Meroño-Peñuela, A.; Stringer, Bas; Loizou, Antonis; Abeln, Sanne; Heringa, Jaap

    2015-01-01

    The inability to include quantitative reasoning in SPARQL queries slows down the application of Semantic Web technology in the life sciences. SCRY, our SPARQL compatible service layer, improves this by executing services at query time and making their outputs query-accessible, generating RDF data on

  17. Predecessor queries in dynamic integer sets

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting

    1997-01-01

    We consider the problem of maintaining a set of n integers in the range 0.2w–1 under the operations of insertion, deletion, predecessor queries, minimum queries and maximum queries on a unit cost RAM with word size w bits. Let f (n) be an arbitrary nondecreasing smooth function satisfying n...

  18. Heuristics-based query optimisation for SPARQL

    NARCIS (Netherlands)

    P. Tsialiamanis (Petros); E. Sidirourgos (Eleftherios); I. Fundulaki; V. Christophides; P.A. Boncz (Peter)

    2012-01-01

    textabstractQuery optimization in RDF Stores is a challenging problem as SPARQL queries typically contain many more joins than equivalent relational plans, and hence lead to a large join order search space. In such cases, cost-based query optimization often is not possible. One practical reason for

  19. Geoscience terminology for data interchange

    Science.gov (United States)

    Richard, Stephen

    2013-04-01

    Workgroups formed by the Commission for the Management and Application of Geoscience Information (CGI), a Commission of the International Union of Geological Sciences (IUGS) have been developing vocabulary resources to promote geoscience information exchange. The Multilingual Thesaurus Working Group (MLT) was formed in 2003 to continue work of the Multhes working group of the 1990s. The Concept Definition Task Group was formed by the CGI Interoperability Working Group in 2007 to develop concept vocabularies for populating GeoSciML interchange documents. The CGI council has determined that it will be more efficient and effective to merge the efforts of these groups and has formed a new Geoscience Terminology Working Group (GTWG, http://www.cgi-iugs.org/tech_collaboration/geoscience_terminology_working_group.html). Each GTWG member will be expected to shepherd one or more vocabularies. There are currently 31 vocabularies in the CGI portfolio, developed for GeoSciML interchange documents (e.g. see http://resource.geosciml.org/ 201202/). Vocabulary development in both groups has been conducted first by gathering candidate terms in Excel spreadsheets because these are easy for text editing and review. When the vocabulary is mature, it is migrated into SKOS, an RDF application for encoding concepts with identifiers, definitions, source information, standard thesaurus type relationships, and language-localized labels. Currently there are 30 vocabularies still required for GeoSciML v3, and 38 proposed vocabularies for use with EarthResourceML (https://www.seegrid.csiro.au/wiki/CGIModel/EarthResourceML). In addition, a project to develop a lithogenetic map unit vocabulary to use for regional geologic map integration using OGC web map services is underway. Considerable work remains to be done to integrate multilingual geoscience terms developed by the MLT Working Group with existing CGI vocabularies to provide multilingual support, and to make the thesaurus compiled by the

  20. Query Adaptive Image Retrieval System

    Directory of Open Access Journals (Sweden)

    Amruta Dubewar

    2014-03-01

    Full Text Available Images play a crucial role in various fields such as art gallery, medical, journalism and entertainment. Increasing use of image acquisition and data storage technologies have enabled the creation of large database. So, it is necessary to develop appropriate information management system to efficiently manage these collections and needed a system to retrieve required images from these collections. This paper proposed query adaptive image retrieval system (QAIRS to retrieve images similar to the query image specified by user from database. The goal of this system is to support image retrieval based on content properties such as colour and texture, usually encoded into feature vectors. In this system, colour feature extracted by various techniques such as colour moment, colour histogram and autocorrelogram and texture feature extracted by using gabor wavelet. Hashing technique is used to embed high dimensional image features into hamming space, where search can be performed by hamming distance of compact hash codes. Depending upon minimum hamming distance it returns the similar image to query image.

  1. Terminology for pregnancy loss prior to viability

    DEFF Research Database (Denmark)

    Kolte, A M; Bernardi, L A; Christiansen, O B

    2015-01-01

    Pregnancy loss prior to viability is common and research in the field is extensive. Unfortunately, terminology in the literature is inconsistent. The lack of consensus regarding nomenclature and classification of pregnancy loss prior to viability makes it difficult to compare study results from...... different centres. In our opinion, terminology and definitions should be based on clinical findings, and when possible, transvaginal ultrasound. With this Early Pregnancy Consensus Statement, it is our goal to provide clear and consistent terminology for pregnancy loss prior to viability....

  2. Boolean queries for news monitoring: Suggesting new query terms to expert users

    NARCIS (Netherlands)

    Verberne, S.; Wabeke, T.; Kaptein, R.

    2016-01-01

    In this paper, we evaluate query suggestion for Boolean queries in a news monitoring system. Users of this system receive news articles that match their running query on a daily basis. Because the news for a topic continuously changes, the queries need regular updating. We first investigated the

  3. Private and Efficient Query Processing on Outsourced Genomic Databases.

    Science.gov (United States)

    Ghasemi, Reza; Al Aziz, Md Momin; Mohammed, Noman; Dehkordi, Massoud Hadian; Jiang, Xiaoqian

    2017-09-01

    Applications of genomic studies are spreading rapidly in many domains of science and technology such as healthcare, biomedical research, direct-to-consumer services, and legal and forensic. However, there are a number of obstacles that make it hard to access and process a big genomic database for these applications. First, sequencing genomic sequence is a time consuming and expensive process. Second, it requires large-scale computation and storage systems to process genomic sequences. Third, genomic databases are often owned by different organizations, and thus, not available for public usage. Cloud computing paradigm can be leveraged to facilitate the creation and sharing of big genomic databases for these applications. Genomic data owners can outsource their databases in a centralized cloud server to ease the access of their databases. However, data owners are reluctant to adopt this model, as it requires outsourcing the data to an untrusted cloud service provider that may cause data breaches. In this paper, we propose a privacy-preserving model for outsourcing genomic data to a cloud. The proposed model enables query processing while providing privacy protection of genomic databases. Privacy of the individuals is guaranteed by permuting and adding fake genomic records in the database. These techniques allow cloud to evaluate count and top-k queries securely and efficiently. Experimental results demonstrate that a count and a top-k query over 40 Single Nucleotide Polymorphisms (SNPs) in a database of 20 000 records takes around 100 and 150 s, respectively.

  4. Bio-TDS: bioscience query tool discovery system.

    Science.gov (United States)

    Gnimpieba, Etienne Z; VanDiermen, Menno S; Gustafson, Shayla M; Conn, Bill; Lushbough, Carol M

    2017-01-04

    Bioinformatics and computational biology play a critical role in bioscience and biomedical research. As researchers design their experimental projects, one major challenge is to find the most relevant bioinformatics toolkits that will lead to new knowledge discovery from their data. The Bio-TDS (Bioscience Query Tool Discovery Systems, http://biotds.org/) has been developed to assist researchers in retrieving the most applicable analytic tools by allowing them to formulate their questions as free text. The Bio-TDS is a flexible retrieval system that affords users from multiple bioscience domains (e.g. genomic, proteomic, bio-imaging) the ability to query over 12 000 analytic tool descriptions integrated from well-established, community repositories. One of the primary components of the Bio-TDS is the ontology and natural language processing workflow for annotation, curation, query processing, and evaluation. The Bio-TDS's scientific impact was evaluated using sample questions posed by researchers retrieved from Biostars, a site focusing on BIOLOGICAL DATA ANALYSIS: The Bio-TDS was compared to five similar bioscience analytic tool retrieval systems with the Bio-TDS outperforming the others in terms of relevance and completeness. The Bio-TDS offers researchers the capacity to associate their bioscience question with the most relevant computational toolsets required for the data analysis in their knowledge discovery process.

  5. Truth Space Method for Caching Database Queries

    Directory of Open Access Journals (Sweden)

    S. V. Mosin

    2015-01-01

    Full Text Available We propose a new method of client-side data caching for relational databases with a central server and distant clients. Data are loaded into the client cache based on queries executed on the server. Every query has the corresponding DB table – the result of the query execution. These queries have a special form called "universal relational query" based on three fundamental Relational Algebra operations: selection, projection and natural join. We have to mention that such a form is the closest one to the natural language and the majority of database search queries can be expressed in this way. Besides, this form allows us to analyze query correctness by checking lossless join property. A subsequent query may be executed in a client’s local cache if we can determine that the query result is entirely contained in the cache. For this we compare truth spaces of the logical restrictions in a new user’s query and the results of the queries execution in the cache. Such a comparison can be performed analytically , without need in additional Database queries. This method may be used to define lacking data in the cache and execute the query on the server only for these data. To do this the analytical approach is also used, what distinguishes our paper from the existing technologies. We propose four theorems for testing the required conditions. The first and the third theorems conditions allow us to define the existence of required data in cache. The second and the fourth theorems state conditions to execute queries with cache only. The problem of cache data actualizations is not discussed in this paper. However, it can be solved by cataloging queries on the server and their serving by triggers in background mode. The article is published in the author’s wording.

  6. A solution of spatial query processing and query optimization for spatial databases

    Institute of Scientific and Technical Information of China (English)

    YUAN Jie; XIE Kun-qing; MA Xiu-jun; ZHANG Min; SUN Le-bin

    2004-01-01

    Recently, attention has been focused on spatial query language which is used to query spatial databases. A design of spatial query language has been presented in this paper by extending the standard relational database query language SQL. It recognizes the significantly different requirements of spatial data handling and overcomes the inherent problems of the application of conventional database query languages. This design is based on an extended spatial data model, including the spatial data types and the spatial operators on them. The processing and optimization of spatial queries have also been discussed in this design. In the end, an implementation of this design is given in a spatial query subsystem.

  7. Cache-Based Aggregate Query Shipping: An Efficient Scheme of Distributed OLAP Query Processing

    Institute of Scientific and Technical Information of China (English)

    Hua-Ming Liao; Guo-Shun Pei

    2008-01-01

    Our study introduces a novel distributed query plan refinement phase in an enhanced architecture of distributed query processing engine (DQPE). Query plan refinement generates potentially efficient distributed query plan by reusable aggregate query shipping (RAQS) approach. The approach improves response time at the cost of pre-processing time. If theoverheads could not be compensated by query results reusage, RAQS is no more favorable. Therefore a global cost estimation model is employed to get proper operators: RR_Agg, R_Agg, or R_Scan. For the purpose of reusing results of queries with aggregate function in distributed query processing, a multi-level hybrid view caching (HVC) scheme is introduced. The scheme retains the advantages of partial match and aggregate query results caching. By our solution, evaluations with distributed TPC-H queries show significant improvement on average response time.

  8. Web development with jQuery

    CERN Document Server

    York, Richard

    2015-01-01

    Newly revised and updated resource on jQuery's many features and advantages Web Development with jQuery offers a major update to the popular Beginning JavaScript and CSS Development with jQuery from 2009. More than half of the content is new or updated, and reflects recent innovations with regard to mobile applications, jQuery mobile, and the spectrum of associated plugins. Readers can expect thorough revisions with expanded coverage of events, CSS, AJAX, animation, and drag and drop. New chapters bring developers up to date on popular features like jQuery UI, navigation, tables, interacti

  9. National Drug File - Reference Terminology API

    Data.gov (United States)

    U.S. Department of Health & Human Services — The National Drug File - Reference Terminology (NDF-RT) is produced by the U.S. Department of Veterans Affairs, Veterans Health Administration (VHA). NDF-RT is an...

  10. Solid mineral fuels. Vocabulary. Kul. Terminologi

    Energy Technology Data Exchange (ETDEWEB)

    1988-01-01

    Official Danish terminology, in conjunction with the English, for solid mineral fuels. A definition of each term is given, and the publication includes both a Danish and an English index to the terms mentioned. (AB).

  11. Terminology of ranging measurements and DSS calibrations

    Science.gov (United States)

    Komarek, T. A.; Otoshi, T. Y.

    1976-01-01

    A set of basic terminology related to deep space ranging measurements is proposed. Calibration equations are derived for the dish-mounted zero delay device method for 26-m antenna systems and the translator method for 64-m antenna systems.

  12. Integrative nature of financial risk management terminology

    OpenAIRE

    Akhmetova, Maynur

    2014-01-01

    Interdisciplinary approach to studying financial risk management terminology. Languages for special purposes of developed scientific fields are the most productive sources for borrowings for dynamically developing ones. Sources of term borrowings for financial risk management: their specific features and types.

  13. Terminology and French-Spanish business translation: evaluating terminology resources for the translation of accounting documents

    OpenAIRE

    2014-01-01

    The aim of this paper is to evaluate a series of terminology resources and determine their suitability to the practice of French-Spanish translation of accounting documents. First we identify the terminology needs of a specific group of translator trainees when facing business translation, as well as the resources they use particularly when translating annual accounts. Then, we select various terminology resources used in this context and evaluate them according to their needs. The results su...

  14. Structured Query Language for Virtual Observatory

    CERN Document Server

    Shirasaki, Y; Mizumoto, Y; Tanaka, M; Honda, S; Oe, M; Yasuda, N; Masunaga, Y; Shirasaki, Yuji; Ohishi, Masatoshi; Mizumoto, Yoshihiko; Tanaka, Masahiro; Honda, Satoshi; Oe, Masafumi; Yasuda, Naoki; Masunaga, Yoshifumi

    2004-01-01

    Currently two query languages are defined as standards for the Virtual Observatory (VO). Astronomical Data Query Language (ADQL) is used for catalog data query and Simple Image Access Protocol (SIAP) is for image data query. As a result, when we query each data service, we need to know in advance which language is supported and then construct a query language accordingly. The construct of SIAP is simple, but they have a limited capability. For example, there is no way to specify multiple regions in one query, and it is difficult to specify complex query conditions. In this paper, we propose a unified query language for any kind of astronomical database on the basis of SQL99. SQL is a query language optimized for a table data, so to apply the SQL to the image and spectrum data set, the data structure need to be mapped to a table like structure. We present specification of this query language and an example of the architecture for the database system.

  15. Pancreatic cytology: standardised terminology and nomenclature.

    Science.gov (United States)

    Perez-Machado, M A

    2016-06-01

    Pancreatic cytology can make a real difference to the management of patients. However it is a challenge in those cases where a definitive diagnosis of malignancy cannot be made with confidence. This creates the need for a unified terminology and nomenclature system that provides intra- and interdepartmental guidance for diagnosis. The Papanicolaou Society of Cytopathology (PSC) has published new guidelines for pancreaticobiliary cytology, addressing indications, techniques, terminology and nomenclature, ancillary studies, and postprocedure management.

  16. [Definition and terminology of Raynaud's syndrome].

    Science.gov (United States)

    Heidrich, H

    2008-08-01

    Physicians have for a long time used different definitions, terminology and differential diagnoses for Raynaud's syndromes, which has resulted in diagnostic, therapeutic and prognostic problems. In order for difficulties of understanding to be prevented, the terminology should be restricted to the most common terms in international use, i. e. primary, secondary and suspected secondary Raynaud's syndrome. The characteristics of those three forms of Raynaud's syndrome are outlined.

  17. Informativeness of Economics and Information Terminology

    Directory of Open Access Journals (Sweden)

    Elvyra Tadauskienė

    2011-04-01

    Full Text Available Informativeness of economics and information terminology is being discussed in the article. As there exist too types of the terminology (international and Lithuanian, when translating it is necessary to make them uniform. Recommendations are given when to use international words and when their Lithuanian equi-valents. When dealing with the problem a bigger contribution should be introduced to this by the language surveillance institutions and the authors of the dictionaries.

  18. [Establishment of anatomical terminology in Japan].

    Science.gov (United States)

    Shimada, Kazuyuki

    2008-12-01

    The history of anatomical terminology in Japan began with the publication of Waran Naikei Ihan-teimŏ in 1805 and Chŏtei Kaitai Shinsho in 1826. Although the establishment of Japanese anatomical terminology became necessary during the Meiji era when many western anatomy books imported into Janan were translated, such terminology was not unified during this period and varied among translators. In 1871, Tsukumo Ono's Kaibŏgaku Gosen was published by the Ministry of Education. Although this book is considered to be the first anatomical glossary terms in Japan, its contents were incomplete. Overseas, the German Anatomical Society established a unified anatomical terminology in 1895 called the Basle Nomina Anatomica (B.N.A.). Based on this development, Kaibŏgaku Meishŭ which follows the BNA, by Buntarŏ Suzuki was published in 1905. With the subsequent establishment in 1935 of Jena Nomina Anatomica (J.N.A.), the unification of anatomical terminology was also accelerated in Japan, leading to the further development of terminology.

  19. 46 CFR 520.5 - Standard tariff terminology.

    Science.gov (United States)

    2010-10-01

    ... 46 Shipping 9 2010-10-01 2010-10-01 false Standard tariff terminology. 520.5 Section 520.5... AUTOMATED TARIFFS § 520.5 Standard tariff terminology. (a) Approved codes. The Standard Terminology Appendix.... They are intended to provide a standard terminology baseline for tariffs to facilitate...

  20. Standard Terminology Relating to Photovoltaic Solar Energy Conversion

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2005-01-01

    1.1 This terminology pertains to photovoltaic (radiant-to-electrical energy conversion) device performance measurements and is not a comprehensive list of terminology for photovoltaics in general. 1.2 Additional terms used in this terminology and of interest to solar energy may be found in Terminology E 772.

  1. EquiX-A Search and Query Language for XML.

    Science.gov (United States)

    Cohen, Sara; Kanza, Yaron; Kogan, Yakov; Sagiv, Yehoshua; Nutt, Werner; Serebrenik, Alexander

    2002-01-01

    Describes EquiX, a search language for XML that combines querying with searching to query the data and the meta-data content of Web pages. Topics include search engines; a data model for XML documents; search query syntax; search query semantics; an algorithm for evaluating a query on a document; and indexing EquiX queries. (LRW)

  2. Monitoring nearest neighbor queries with cache strategies

    Institute of Scientific and Technical Information of China (English)

    PAN Peng; LU Yan-sheng

    2007-01-01

    The problem of continuously monitoring multiple K-nearest neighbor (K-NN) queries with dynamic object and query dataset is valuable for many location-based applications. A practical method is to partition the data space into grid cells, with both object and query table being indexed by this grid structure, while solving the problem by periodically joining cells of objects with queries having their influence regions intersecting the cells. In the worst case, all cells of objects will be accessed once. Object and query cache strategies are proposed to further reduce the I/O cost. With object cache strategy, queries remaining static in current processing cycle seldom need I/O cost, they can be returned quickly. The main I/O cost comes from moving queries, the query cache strategy is used to restrict their search-regions, which uses current results of queries in the main memory buffer. The queries can share not only the accessing of object pages, but also their influence regions. Theoretical analysis of the expected I/O cost is presented, with the I/O cost being about 40% that of the SEA-CNN method in the experiment results.

  3. Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience.

    Science.gov (United States)

    Ellis, Helena; Joshi, Mary-Beth; Lynn, Aenoch J; Walden, Anita

    2017-03-24

    Biobanking at Duke University has existed for decades and has grown over time in silos and based on specialized needs, as is true with most biomedical research centers. These silos developed informatics systems to support their own individual requirements, with no regard for semantic or syntactic interoperability. Duke undertook an initiative to implement an enterprise-wide biobanking information system to serve its many diverse biobanking entities. A significant part of this initiative was the development of a common terminology for use in the commercial software platform. Common terminology provides the foundation for interoperability across biobanks for data and information sharing. We engaged experts in research, informatics, and biobanking through a consensus-driven process to agree on 361 terms and their definitions that encompass the lifecycle of a biospecimen. Existing standards, common terms, and data elements from published articles provided a foundation on which to build the biobanking terminology; a broader set of stakeholders then provided additional input and feedback in a secondary vetting process. The resulting standardized biobanking terminology is now available for sharing with the biobanking community to serve as a foundation for other institutions who are considering a similar initiative.

  4. Adding query privacy to robust DHTs

    DEFF Research Database (Denmark)

    Backes, Michael; Goldberg, Ian; Kate, Aniket

    2012-01-01

    Interest in anonymous communication over distributed hash tables (DHTs) has increased in recent years. However, almost all known solutions solely aim at achieving sender or requestor anonymity in DHT queries. In many application scenarios, it is crucial that the queried key remains secret from...... intermediate peers that (help to) route the queries towards their destinations. In this paper, we satisfy this requirement by presenting an approach for providing privacy for the keys in DHT queries. We use the concept of oblivious transfer (OT) in communication over DHTs to preserve query privacy without...... compromising spam resistance. Although our OT-based approach can work over any DHT, we concentrate on robust DHTs that can tolerate Byzantine faults and resist spam. We choose the best-known robust DHT construction, and employ an efficient OT protocol well-suited for achieving our goal of obtaining query...

  5. jQuery for ASPNET Developers

    CERN Document Server

    Brinkman, Joe

    2009-01-01

    This Wrox Blox teaches you how to use jQuery with your ASP.NET-based websites.  jQuery greatly simplifies JavaScript development and allows you to create highly interactive and responsive websites using the latest JavaScript and AJAX techniques. The author walks you through the jQuery API using a simple ASP.NET MVC application to highlight major topics, and shows how you can apply jQuery to your own applications. After learning the basics of using jQuery, you'll discover how easy it is to use within your own ASP.NET projects.  Whether you are using WebForms or the MVC framework, jQuery will gr

  6. GQL: Extending XQuery to Query GML Documents

    Institute of Scientific and Technical Information of China (English)

    GUAN Jihong; ZHU Fubao; ZHOU Jiaogen; NIU Liping

    2006-01-01

    GML is becoming the de facto standard for electronic data exchange among the applications of Web and distributed geographic information systems. However, the conventional query languages (e.g. SQL and its extended versions) are not suitable for direct querying and updating of GML documents. Even the effective approaches working well with XML could not guarantee good results when applied to GML documents. Although XQuery is a powerful standard query language for XML, it is not proposed for querying spatial features, which constitute the most important components in GML documents. We propose GQL, a query language specification to support spatial queries over GML documents by extending XQuery. The data model, algebra, and formal semantics as well as various spatial functions and operations of GQL are presented in detail.

  7. jQuery Tools UI Library

    CERN Document Server

    Libby, Alex

    2012-01-01

    A practical tutorial with powerful yet simple projects that are quick to implement. This book is aimed at developers who have prior jQuery knowledge, but may not have any prior experience with jQuery Tools. It is possible that they may have started with the basics of jQuery Tools, but want to learn more about how it can be used, as well as get ideas for future projects.

  8. Evaluating Multidimensional Queries by Diamond Dicing

    CERN Document Server

    Webb, Hazel; Lemire, Daniel

    2010-01-01

    Queries that constrain multiple dimensions simultaneously are difficult to express and compute efficiently in both Structured Query Language (SQL) and multidimensional languages. We introduce the diamond cube operator to facilitate the expression of one such class of multidimensional query. We have developed, implemented and tested algorithms to compute diamonds on both real and synthetic large data sets. We show that our custom implementation is more than twenty-five times faster, on a large data set, than popular database engines.

  9. What's in a name? Variations in terminology of third-party reproduction.

    Science.gov (United States)

    Beeson, Diane; Darnovsky, Marcy; Lippman, Abby

    2015-12-01

    The terminology used to discuss third-party reproduction, as with other new biomedical processes, can ease or impede communication and even influence behaviour. In an effort to sensitize analysts and stakeholders to variations in terminology and to facilitate communication on issues arising from international surrogacy arrangements, this paper examines variations in terms used. We introduce some of the issues previously raised by scholars concerned with analysis of discourse related to third-party reproduction. We then survey the terms used in English-language discussions to denote specific actors, including 'surrogates,' 'intended parents,' gamete providers and children, as well as terms used to describe 'surrogacy arrangements.' We conclude with a discussion on navigating and negotiating the use of these various and value-laden terms.

  10. Queries with Guarded Negation (full version)

    CERN Document Server

    Barany, Vince; Otto, Martin

    2012-01-01

    A well-established and fundamental insight in database theory is that negation (also known as complementation) tends to make queries difficult to process and difficult to reason about. Many basic problems are decidable and admit practical algorithms in the case of unions of conjunctive queries, but become difficult or even undecidable when queries are allowed to contain negation. Inspired by recent results in finite model theory, we consider a restricted form of negation, guarded negation. We introduce a fragment of SQL, called GN-SQL, as well as a fragment of Datalog with stratified negation, called GN-Datalog, that allow only guarded negation, and we show that these query languages are computationally well behaved, in terms of testing query containment, query evaluation, open-world query answering, and boundedness. GN-SQL and GN-Datalog subsume a number of well known query languages and constraint languages, such as unions of conjunctive queries, monadic Datalog, and frontier-guarded tgds. In addition, an a...

  11. Oceanographic ontology-based spatial knowledge query

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The construction of oceanographic ontologies is fundamental to the "digital ocean". Therefore, on the basis of introduction of new concept of oceanographic ontology, an oceanographic ontology-based spatial knowledge query (OOBSKQ) method was proposed and developed. Because the method uses a natural language to describe query conditions and the query result is highly integrated knowledge,it can provide users with direct answers while hiding the complicated computation and reasoning processes, and achieves intelligent,automatic oceanographic spatial information query on the level of knowledge and semantics. A case study of resource and environmental application in bay has shown the implementation process of the method and its feasibility and usefulness.

  12. Querying moving objects detected by sensor networks

    CERN Document Server

    Bestehorn, Markus

    2012-01-01

    Declarative query interfaces to Sensor Networks (SN) have become a commodity. These interfaces allow access to SN deployed for collecting data using relational queries. However, SN are not confined to data collection, but may track object movement, e.g., wildlife observation or traffic monitoring. While rational approaches are well suited for data collection, research on ""Moving Object Databases"" (MOD) has shown that relational operators are unsuitable to express information needs on object movement, i.e., spatio-temporal queries. ""Querying Moving Objects Detected by Sensor Networks"" studi

  13. Topic Level Disambiguation for Weak Queries

    Directory of Open Access Journals (Sweden)

    Zhang, Hui

    2013-09-01

    Full Text Available Despite limited success, today's information retrieval (IR systems are not intelligent or reliable. IR systems return poor search results when users formulate their information needs into incomplete or ambiguous queries (i.e., weak queries. Therefore, one of the main challenges in modern IR research is to provide consistent results across all queries by improving the performance on weak queries. However, existing IR approaches such as query expansion are not overly effective because they make little effort to analyze and exploit the meanings of the queries. Furthermore, word sense disambiguation approaches, which rely on textual context, are ineffective against weak queries that are typically short. Motivated by the demand for a robust IR system that can consistently provide highly accurate results, the proposed study implemented a novel topic detection that leveraged both the language model and structural knowledge of Wikipedia and systematically evaluated the effect of query disambiguation and topic-based retrieval approaches on TREC collections. The results not only confirm the effectiveness of the proposed topic detection and topic-based retrieval approaches but also demonstrate that query disambiguation does not improve IR as expected.

  14. Effective Density Queries of Continuously Moving Objects

    DEFF Research Database (Denmark)

    Jensen, Christian Søndergaard; Lin, D.; Ooi, B.C.

    2006-01-01

    control system, we need to identify the places that are or would be affected by a traffic jam, and report this information to drivers so that they can choose a less congested route. As a naive way to solve the problem is prohibitively expensive, we first introduce a framework which makes the problem......In this paper, we study a newly emerging type of queries on moving objects - the density query. Basically, this query locates regions in the data space where the density of the objects is high. This type of queries is especially useful in Location Based Services (LBS). For example, in a traffic...

  15. Adding Query Privacy to Robust DHTs

    DEFF Research Database (Denmark)

    Backes, Michael; Goldberg, Ian; Kate, Aniket

    2011-01-01

    of obtaining query privacy over robust DHTs. Finally, we compare the performance of our privacy-preserving protocols with their more privacy-invasive counterparts. We observe that there is no increase in the message complexity and only a small overhead in the computational complexity....... intermediate peers that (help to) route the queries towards their destinations. In this paper, we satisfy this requirement by presenting an approach for providing privacy for the keys in DHT queries. We use the concept of oblivious transfer (OT) in communication over DHTs to preserve query privacy without...

  16. Database queries and constraints via lifting problems

    CERN Document Server

    Spivak, David I

    2012-01-01

    Previous work has shown a tight relationship between databases and categories. In the present paper we extend that connection to show that certain queries and constraints correspond to the algebro-topological notion of lifting problems. In our formulation, each so-called SPARQL graph pattern query corresponds to a lifting problem, and each solution to the query corresponds to a lift. We interpret constraints within the same formalism and then investigate some formal properties of queries and constraints, e.g. their behavior under data migration functors.

  17. BioFed: federated query processing over life sciences linked open data.

    Science.gov (United States)

    Hasnain, Ali; Mehmood, Qaiser; Sana E Zainab, Syeda; Saleem, Muhammad; Warren, Claude; Zehra, Durre; Decker, Stefan; Rebholz-Schuhmann, Dietrich

    2017-03-15

    Biomedical data, e.g. from knowledge bases and ontologies, is increasingly made available following open linked data principles, at best as RDF triple data. This is a necessary step towards unified access to biological data sets, but this still requires solutions to query multiple endpoints for their heterogeneous data to eventually retrieve all the meaningful information. Suggested solutions are based on query federation approaches, which require the submission of SPARQL queries to endpoints. Due to the size and complexity of available data, these solutions have to be optimised for efficient retrieval times and for users in life sciences research. Last but not least, over time, the reliability of data resources in terms of access and quality have to be monitored. Our solution (BioFed) federates data over 130 SPARQL endpoints in life sciences and tailors query submission according to the provenance information. BioFed has been evaluated against the state of the art solution FedX and forms an important benchmark for the life science domain. The efficient cataloguing approach of the federated query processing system 'BioFed', the triple pattern wise source selection and the semantic source normalisation forms the core to our solution. It gathers and integrates data from newly identified public endpoints for federated access. Basic provenance information is linked to the retrieved data. Last but not least, BioFed makes use of the latest SPARQL standard (i.e., 1.1) to leverage the full benefits for query federation. The evaluation is based on 10 simple and 10 complex queries, which address data in 10 major and very popular data sources (e.g., Dugbank, Sider). BioFed is a solution for a single-point-of-access for a large number of SPARQL endpoints providing life science data. It facilitates efficient query generation for data access and provides basic provenance information in combination with the retrieved data. BioFed fully supports SPARQL 1.1 and gives access to the

  18. Object-Extended OLAP Querying

    DEFF Research Database (Denmark)

    Pedersen, Torben Bach; Gu, Junmin; Shoshani, Arie

    2009-01-01

    On-line analytical processing (OLAP) systems based on a dimensional view of data have found widespread use in business applications and are being used increasingly in non-standard applications. These systems provide good performance and ease-of-use. However, the complex structures and relationshi...... with performance measurements that show that the approach is a viable alternative to a physically integrated data warehouse.......On-line analytical processing (OLAP) systems based on a dimensional view of data have found widespread use in business applications and are being used increasingly in non-standard applications. These systems provide good performance and ease-of-use. However, the complex structures and relationships...... inherent in data in non-standard applications are not accommodated well by OLAP systems. In contrast, object database systems are built to handle such complexity, but do not support OLAP-type querying well. This paper presents the concepts and techniques underlying a flexible, "multi-model" federated...

  19. Query Optimization for Deductive Databases

    Institute of Scientific and Technical Information of China (English)

    周傲英; 施伯乐

    1995-01-01

    A systematic,efficient compilation method for query evaluation of Deductive Databases (DeDB) is proposed in this paper.In order to eliminate redundancy and to minimize the potentially relevant facts,which are two key issues to the efficiency of a DeDB,the compilation process is decomposed into two phases.The first is the pre-compilation phase,which is responsible for the minimization of the potentially relevant facts.The second,which we refer to as the general compilation phase,is responsible for the elimination of redundancy.The rule/goal graph devised by J.D.Ullman is appropriately extended and used as a uniform formalism.Two general algorithms corresponding to the two phases respectively are described intuitively and formally.

  20. Object-Extended OLAP Querying

    DEFF Research Database (Denmark)

    Pedersen, Torben Bach; Gu, Junmin; Shoshani, Arie

    2009-01-01

    inherent in data in non-standard applications are not accommodated well by OLAP systems. In contrast, object database systems are built to handle such complexity, but do not support OLAP-type querying well. This paper presents the concepts and techniques underlying a flexible, "multi-model" federated...... system that enables OLAP users to exploit simultaneously the features of OLAP and object systems. The system allows data to be handled using the most appropriate data model and technology: OLAP systems for dimensional data and object database systems for more complex, general data. This allows data...... analysis on the OLAP data to be significantly enriched by the use of additional object data. Additionally, physical integration of the OLAP and the object data can be avoided. As a vehicle for demonstrating the capabilities of the system, a prototypical OLAP language is defined and extended to naturally...

  1. Semantics and the medical web: a review of barriers and breakthroughs in effective healthcare query.

    Science.gov (United States)

    Lorence, Daniel P; Spink, Amanda

    2004-06-01

    This paper provides an overview of the research into current medical vocabularies and their impact on searching the Web for health information. The Web provides growing opportunities for laypersons to gain knowledge about specific health conditions, though research to date has been incomplete. Many studies have examined aspects of controlled medical vocabularies. Other studies have examined aspects of medical Web searching vocabularies. In this context, there is a growing need to examine more closely laypersons' Web queries using controlled medical vocabularies that were designed to serve the needs of medical professionals. It may be the case that the average consumer of Web health services is not able to use correct medical terminology, and may not be able to choose analogous or synonymous terms from a search result list. Our review suggests a growing need for studies to examine the current applicability of controlled medical vocabularies as well as alternatives to semantic query by Web search engine users.

  2. Information Retrieval Systems Adapted to the Biomedical Domain

    CERN Document Server

    Marrero, Mónica; Urbano, Julián; Morato, Jorge; Moreiro, José-Antonio; 10.3145/epi.2010.may.04

    2012-01-01

    The terminology used in Biomedicine shows lexical peculiarities that have required the elaboration of terminological resources and information retrieval systems with specific functionalities. The main characteristics are the high rates of synonymy and homonymy, due to phenomena such as the proliferation of polysemic acronyms and their interaction with common language. Information retrieval systems in the biomedical domain use techniques oriented to the treatment of these lexical peculiarities. In this paper we review some of the techniques used in this domain, such as the application of Natural Language Processing (BioNLP), the incorporation of lexical-semantic resources, and the application of Named Entity Recognition (BioNER). Finally, we present the evaluation methods adopted to assess the suitability of these techniques for retrieving biomedical resources.

  3. The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries

    Directory of Open Access Journals (Sweden)

    Apweiler Rolf

    2006-02-01

    Full Text Available Abstract Background With the vast amounts of biomedical data being generated by high-throughput analysis methods, controlled vocabularies and ontologies are becoming increasingly important to annotate units of information for ease of search and retrieval. Each scientific community tends to create its own locally available ontology. The interfaces to query these ontologies tend to vary from group to group. We saw the need for a centralized location to perform controlled vocabulary queries that would offer both a lightweight web-accessible user interface as well as a consistent, unified SOAP interface for automated queries. Results The Ontology Lookup Service (OLS was created to integrate publicly available biomedical ontologies into a single database. All modified ontologies are updated daily. A list of currently loaded ontologies is available online. The database can be queried to obtain information on a single term or to browse a complete ontology using AJAX. Auto-completion provides a user-friendly search mechanism. An AJAX-based ontology viewer is available to browse a complete ontology or subsets of it. A programmatic interface is available to query the webservice using SOAP. The service is described by a WSDL descriptor file available online. A sample Java client to connect to the webservice using SOAP is available for download from SourceForge. All OLS source code is publicly available under the open source Apache Licence. Conclusion The OLS provides a user-friendly single entry point for publicly available ontologies in the Open Biomedical Ontology (OBO format. It can be accessed interactively or programmatically at http://www.ebi.ac.uk/ontology-lookup/.

  4. Standard Terminology Relating to Wear and Erosion

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2010-01-01

    1.1 The terms and their definitions given herein represent terminology relating to wear and erosion of solid bodies due to mechanical interactions such as occur with cavitation, impingement by liquid jets or drops or by solid particles, or relative motion against contacting solid surfaces or fluids. This scope interfaces with but generally excludes those processes where material loss is wholly or principally due to chemical action and other related technical fields as, for instance, lubrication. 1.2 This terminology is not exhaustive; the absence of any particular term from this collection does not necessarily imply that its use within this scope is discouraged. However, the terms given herein are the recommended terms for the concepts they represent unless otherwise noted. 1.3 Certain general terms and definitions may be restricted and interpreted, if necessary, to make them particularly applicable to the scope as defined herein. 1.4 The purpose of this terminology is to encourage uniformity and accuracy ...

  5. Variation in terminology: capoeira in Belo Horizonte

    Directory of Open Access Journals (Sweden)

    César Nardelli Cambraia

    2014-12-01

    Full Text Available In this pilot study we analyzed the variation in the terminology of capoeira in Belo Horizonte. The terms referring to 69 videotaped movements of capoeira were collected from 10 informants (5 men and 5 women, aged between 25 and 32 years, capoeira teachers. As a result we obtained 294 different terms whose patterns of variation are distributed among 15 types. We tested the hypothesis that the figurative terms tend to be replaced by non-figurative ones, and it was confirmed by the collected data. This trend was the result of a search for transparency in terminology, making the terms more descriptive in relation to capoeira’s movements.

  6. Different pharmaceutical products need similar terminology.

    Science.gov (United States)

    Crommelin, Daan J A; de Vlieger, Jon S B; Weinstein, Vera; Mühlebach, Stefan; Shah, Vinod P; Schellekens, Huub

    2014-01-01

    In the last decade, discussions on the development of the regulatory framework of generic versions of complex drugs such as biologicals and non-biological complex drugs have attracted broad attention. The terminology used is far from harmonized and can lead to multiple interpretations of legal texts, reflection papers, and guidance documents regarding market introduction as well as reimbursement. This article describes the meaning of relevant terms in different global regions (Europe, USA, WHO) and offers a proposal for a globally accepted terminology regarding (non-) biological complex drugs.

  7. Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies.

    Science.gov (United States)

    Fan, Jung-Wei; Friedman, Carol

    2011-10-01

    Biomedical natural language processing (BioNLP) is a useful technique that unlocks valuable information stored in textual data for practice and/or research. Syntactic parsing is a critical component of BioNLP applications that rely on correctly determining the sentence and phrase structure of free text. In addition to dealing with the vast amount of domain-specific terms, a robust biomedical parser needs to model the semantic grammar to obtain viable syntactic structures. With either a rule-based or corpus-based approach, the grammar engineering process requires substantial time and knowledge from experts, and does not always yield a semantically transferable grammar. To reduce the human effort and to promote semantic transferability, we propose an automated method for deriving a probabilistic grammar based on a training corpus consisting of concept strings and semantic classes from the Unified Medical Language System (UMLS), a comprehensive terminology resource widely used by the community. The grammar is designed to specify noun phrases only due to the nominal nature of the majority of biomedical terminological concepts. Evaluated on manually parsed clinical notes, the derived grammar achieved a recall of 0.644, precision of 0.737, and average cross-bracketing of 0.61, which demonstrated better performance than a control grammar with the semantic information removed. Error analysis revealed shortcomings that could be addressed to improve performance. The results indicated the feasibility of an approach which automatically incorporates terminology semantics in the building of an operational grammar. Although the current performance of the unsupervised solution does not adequately replace manual engineering, we believe once the performance issues are addressed, it could serve as an aide in a semi-supervised solution.

  8. NCBO Ontology Recommender 2.0: An Enhanced Approach for Biomedical Ontology Recommendation

    OpenAIRE

    Martinez-Romero, Marcos; Jonquet, Clement; O'Connor, Martin J.; Graybeal, John; Pazos, Alejandro; Musen, Mark A.

    2016-01-01

    Background. Ontologies and controlled terminologies have become increasingly important in biomedical research. Researchers use ontologies to annotate their data with ontology terms, enabling better data integration and interoperability across disparate datasets. However, the number, variety and complexity of current biomedical ontologies make it cumbersome for researchers to determine which ones to reuse for their specific needs. To overcome this problem, in 2010 the National Center for Biome...

  9. NCBO Ontology Recommender 2.0: An Enhanced Approach for Biomedical Ontology Recommendation

    OpenAIRE

    Mart?nez-Romero, Marcos; Jonquet, Clement; O'Connor, Martin J.; Graybeal, John; Pazos, Alejandro; Musen, Mark A.

    2016-01-01

    Background Ontologies and controlled terminologies have become increasingly important in biomedical research. Researchers use ontologies to annotate their data with ontology terms, enabling better data integration and interoperability across disparate datasets. However, the number, variety and complexity of current biomedical ontologies make it cumbersome for researchers to determine which ones to reuse for their specific needs. To overcome this problem, in 2010 the National Center for Biomed...

  10. Querying Business Process Models with VMQL

    DEFF Research Database (Denmark)

    Störrle, Harald; Acretoaie, Vlad

    2013-01-01

    The Visual Model Query Language (VMQL) has been invented with the objectives (1) to make it easier for modelers to query models effectively, and (2) to be universally applicable to all modeling languages. In previous work, we have applied VMQL to UML, and validated the first of these two claims. ...

  11. Path Minima Queries in Dynamic Weighted Trees

    DEFF Research Database (Denmark)

    Davoodi, Pooya; Brodal, Gerth Stølting; Satti, Srinivasa Rao

    2011-01-01

    In the path minima problem on a tree, each edge is assigned a weight and a query asks for the edge with minimum weight on a path between two nodes. For the dynamic version of the problem, where the edge weights can be updated, we give data structures that achieve optimal query time\\todo{what about...

  12. Meet Charles, big data query advisor

    NARCIS (Netherlands)

    Sellam, T.; Kersten, M.

    2013-01-01

    In scientific data management and business analytics, the most informative queries are a holy grail. Data collection becomes increasingly simpler, yet data exploration gets significantly harder. Exploratory querying is likely to return an empty or an overwhelming result set. On the other hand, data

  13. Meet Charles, big data query advisor

    NARCIS (Netherlands)

    Sellam, T.; Kersten, M.

    2013-01-01

    In scientific data management and business analytics, the most informative queries are a holy grail. Data collection becomes increasingly simpler, yet data exploration gets significantly harder. Exploratory querying is likely to return an empty or an overwhelming result set. On the other hand, data

  14. Quantum associative memory with improved distributed queries

    CERN Document Server

    Njafa, J -P Tchapet; Woafo, Paul

    2012-01-01

    The paper proposes an improved quantum associative algorithm with distributed query based on model proposed by Ezhov et al. We introduce two modifications of the query that optimized data retrieval of correct multi-patterns simultaneously for any rate of the number of the recognition pattern on the total patterns. Simulation results are given.

  15. Improving Web Search for Difficult Queries

    Science.gov (United States)

    Wang, Xuanhui

    2009-01-01

    Search engines have now become essential tools in all aspects of our life. Although a variety of information needs can be served very successfully, there are still a lot of queries that search engines can not answer very effectively and these queries always make users feel frustrated. Since it is quite often that users encounter such "difficult…

  16. Efficient caching for constrained skyline queries

    DEFF Research Database (Denmark)

    Mortensen, Michael Lind; Chester, Sean; Assent, Ira;

    2015-01-01

    Constrained skyline queries retrieve all points that optimize some user’s preferences subject to orthogonal range constraints, but at significant computational cost. This paper is the first to propose caching to improve constrained skyline query response time. Because arbitrary range constraints ...

  17. The Janus Head Article - How Much Terminology Theory Can Practical Terminology Management Use?

    Directory of Open Access Journals (Sweden)

    Petra Drewer

    2012-08-01

    Full Text Available The god Janus in Greek mythology was a two-faced god; each face had its own view of the world. Our idea behind the Janus Head article is to give you two different and maybe even contradicting views on a certain topic. This issue’s Janus Head Article, however, features not two but three different views on terminology work, as researchers, professionals and students (the professionals of tomorrow discuss “How Much Terminology Theory Can Practical Terminology Management Use?” at DaimlerChrysler AG. 

  18. The Janus Head Article - How Much Terminology Theory Can Practical Terminology Management Use?

    OpenAIRE

    Petra Drewer; Sybille Horend

    2012-01-01

    The god Janus in Greek mythology was a two-faced god; each face had its own view of the world. Our idea behind the Janus Head article is to give you two different and maybe even contradicting views on a certain topic. This issue’s Janus Head Article, however, features not two but three different views on terminology work, as researchers, professionals and students (the professionals of tomorrow) discuss “How Much Terminology Theory Can Practical Terminology Management Use?” at DaimlerChrysler...

  19. BIOMedical Search Engine Framework: Lightweight and customized implementation of domain-specific biomedical search engines.

    Science.gov (United States)

    Jácome, Alberto G; Fdez-Riverola, Florentino; Lourenço, Anália

    2016-07-01

    Text mining and semantic analysis approaches can be applied to the construction of biomedical domain-specific search engines and provide an attractive alternative to create personalized and enhanced search experiences. Therefore, this work introduces the new open-source BIOMedical Search Engine Framework for the fast and lightweight development of domain-specific search engines. The rationale behind this framework is to incorporate core features typically available in search engine frameworks with flexible and extensible technologies to retrieve biomedical documents, annotate meaningful domain concepts, and develop highly customized Web search interfaces. The BIOMedical Search Engine Framework integrates taggers for major biomedical concepts, such as diseases, drugs, genes, proteins, compounds and organisms, and enables the use of domain-specific controlled vocabulary. Technologies from the Typesafe Reactive Platform, the AngularJS JavaScript framework and the Bootstrap HTML/CSS framework support the customization of the domain-oriented search application. Moreover, the RESTful API of the BIOMedical Search Engine Framework allows the integration of the search engine into existing systems or a complete web interface personalization. The construction of the Smart Drug Search is described as proof-of-concept of the BIOMedical Search Engine Framework. This public search engine catalogs scientific literature about antimicrobial resistance, microbial virulence and topics alike. The keyword-based queries of the users are transformed into concepts and search results are presented and ranked accordingly. The semantic graph view portraits all the concepts found in the results, and the researcher may look into the relevance of different concepts, the strength of direct relations, and non-trivial, indirect relations. The number of occurrences of the concept shows its importance to the query, and the frequency of concept co-occurrence is indicative of biological relations

  20. Biomedical information retrieval across languages.

    Science.gov (United States)

    Daumke, Philipp; Markü, Kornél; Poprat, Michael; Schulz, Stefan; Klar, Rüdiger

    2007-06-01

    This work presents a new dictionary-based approach to biomedical cross-language information retrieval (CLIR) that addresses many of the general and domain-specific challenges in current CLIR research. Our method is based on a multilingual lexicon that was generated partly manually and partly automatically, and currently covers six European languages. It contains morphologically meaningful word fragments, termed subwords. Using subwords instead of entire words significantly reduces the number of lexical entries necessary to sufficiently cover a specific language and domain. Mediation between queries and documents is based on these subwords as well as on lists of word-n-grams that are generated from large monolingual corpora and constitute possible translation units. The translations are then sent to a standard Internet search engine. This process makes our approach an effective tool for searching the biomedical content of the World Wide Web in different languages. We evaluate this approach using the OHSUMED corpus, a large medical document collection, within a cross-language retrieval setting.

  1. Exploring features for automatic identification of news queries through query logs

    Institute of Scientific and Technical Information of China (English)

    Xiaojuan; ZHANG; Jian; LI

    2014-01-01

    Purpose:Existing researches of predicting queries with news intents have tried to extract the classification features from external knowledge bases,this paper tries to present how to apply features extracted from query logs for automatic identification of news queries without using any external resources.Design/methodology/approach:First,we manually labeled 1,220 news queries from Sogou.com.Based on the analysis of these queries,we then identified three features of news queries in terms of query content,time of query occurrence and user click behavior.Afterwards,we used 12 effective features proposed in literature as baseline and conducted experiments based on the support vector machine(SVM)classifier.Finally,we compared the impacts of the features used in this paper on the identification of news queries.Findings:Compared with baseline features,the F-score has been improved from 0.6414 to0.8368 after the use of three newly-identified features,among which the burst point(bst)was the most effective while predicting news queries.In addition,query expression(qes)was more useful than query terms,and among the click behavior-based features,news URL was the most effective one.Research limitations:Analyses based on features extracted from query logs might lead to produce limited results.Instead of short queries,the segmentation tool used in this study has been more widely applied for long texts.Practical implications:The research will be helpful for general-purpose search engines to address search intents for news events.Originality/value:Our approach provides a new and different perspective in recognizing queries with news intent without such large news corpora as blogs or Twitter.

  2. Adding Query Privacy to Robust DHTs

    DEFF Research Database (Denmark)

    Backes, Michael; Goldberg, Ian; Kate, Aniket

    2011-01-01

    Interest in anonymous communication over distributed hash tables (DHTs) has increased in recent years. However, almost all known solutions solely aim at achieving sender or requestor anonymity in DHT queries. In many application scenarios, it is crucial that the queried key remains secret from...... intermediate peers that (help to) route the queries towards their destinations. In this paper, we satisfy this requirement by presenting an approach for providing privacy for the keys in DHT queries. We use the concept of oblivious transfer (OT) in communication over DHTs to preserve query privacy without...... compromising spam resistance. Although our OT-based approach can work over any DHT, we concentrate on communication over robust DHTs that can tolerate Byzantine faults and resist spam. We choose the best-known robust DHT construction, and employ an efficient OT protocol well-suited for achieving our goal...

  3. An Effective Information Retrieval for Ambiguous Query

    CERN Document Server

    Roul, R K

    2012-01-01

    Search engine returns thousands of web pages for a single user query, in which most of them are not relevant. In this context, effective information retrieval from the expanding web is a challenging task, in particular, if the query is ambiguous. The major question arises here is that how to get the relevant pages for an ambiguous query. We propose an approach for the effective result of an ambiguous query by forming community vector based on association concept of data minning using vector space model and the freedictionary. We develop clusters by computing the similarity between community vectors and document vectors formed from the extracted web pages by the search engine. We use Gensim package to implement the algorithm because of its simplicity and robust nature. Analysis shows that our approach is an effective way to form clusters for an ambiguous query.

  4. Ensuring Query Compatibility with Evolving XML Schemas

    CERN Document Server

    Genevès, Pierre; Quint, Vincent

    2008-01-01

    During the life cycle of an XML application, both schemas and queries may change from one version to another. Schema evolutions may affect query results and potentially the validity of produced data. Nowadays, a challenge is to assess and accommodate the impact of theses changes in rapidly evolving XML applications. This article proposes a logical framework and tool for verifying forward/backward compatibility issues involving schemas and queries. First, it allows analyzing relations between schemas. Second, it allows XML designers to identify queries that must be reformulated in order to produce the expected results across successive schema versions. Third, it allows examining more precisely the impact of schema changes over queries, therefore facilitating their reformulation.

  5. Contributions to the History of Library Terminology.

    Science.gov (United States)

    Shapiro, Fred R.

    1989-01-01

    Discusses the historical method in lexicography, the general characteristics of library terminology, and the current state of library lexicography. Presents a glossary which lists quotations supplementing the coverage of library-related vocabulary in the "Oxford English Dictionary" (OED) and the "Dictionary of Americanisms" (DA). (LRW)

  6. Revisiting the Global Software Engineering Terminology

    DEFF Research Database (Denmark)

    Tell, Paolo; Giuffrida, Rosalba; Shah, Hina

    2013-01-01

    Even though Global Software Engineering (GSE) has been a research topic of interest for many years, some of its ground terminology is still lacking a unified, coherent, and shared definition and/or classification. The purpose of this report is to collect, outline, and relate several fundamental...

  7. Polysaccharides: Molecular and Supramolecular Structures. Terminology.

    NARCIS (Netherlands)

    Heinze, Thomas; Petzold-Welcke, Katrin; Dam, van J.E.G.

    2012-01-01

    This chapter summarises important issues
    about the molecular and supramolecular structure
    of polysaccharides. It describes the terminology
    of polysaccharides systematically. The
    polysaccharides are divided regarding the
    molecular structures in glucans, polyoses,
    polysaccharid

  8. Standard Terminology of Structural Sandwich Constructions

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2007-01-01

    1.1 This terminology covers terms necessary for a basic uniform understanding and usage of the language peculiar to structural sandwich constructions. The simplest structural sandwich is a three layered construction formed by bonding a thin layer (facing) to each side of a thick layer (core).

  9. Different pharmaceutical products need similar terminology

    NARCIS (Netherlands)

    Crommelin, Daan J A; de Vlieger, Jon S B; Weinstein, Vera; Mühlebach, Stefan; Shah, Vinod P; Schellekens, Huub

    2014-01-01

    In the last decade, discussions on the development of the regulatory framework of generic versions of complex drugs such as biologicals and non-biological complex drugs have attracted broad attention. The terminology used is far from harmonized and can lead to multiple interpretations of legal texts

  10. Different pharmaceutical products need similar terminology

    NARCIS (Netherlands)

    Crommelin, Daan J A|info:eu-repo/dai/nl/074578804; de Vlieger, Jon S B; Weinstein, Vera; Mühlebach, Stefan; Shah, Vinod P; Schellekens, Huub|info:eu-repo/dai/nl/068406762

    In the last decade, discussions on the development of the regulatory framework of generic versions of complex drugs such as biologicals and non-biological complex drugs have attracted broad attention. The terminology used is far from harmonized and can lead to multiple interpretations of legal

  11. BELARUSSIAN CONSTRUCTION SCIENTIFIC AND TECHNICAL TERMINOLOGY

    Directory of Open Access Journals (Sweden)

    E. A. Моyseichik

    2010-01-01

    Full Text Available The paper analyzes an experience of terminology development and standardization of construction technical normative and legal acts. The paper reveals methods for better qualitative development of terms for construction and indicates a necessity of their harmonization with the acts in Belarus. 

  12. Lessons in Political and Legal Terminology.

    Science.gov (United States)

    Jenkins, Earl N.

    These lessons are designed to familiarize students with political and legal terminology through memorization and testing. Students are required to take notes on the terms and definitions given in class on 3 by 5 cards to file alphabetically at home. They are also instructed to keep a notebook of the terms to bring to class and memorize. After one…

  13. The Heuristic Value of Cognitive Terminology

    Science.gov (United States)

    Zentall, Thomas R.

    2012-01-01

    If judiciously applied, cognitive terminology can encourage further examination of phenomena in useful ways that may not otherwise be studied. I give examples of 3 phenomena, the study of which have benefitted from a cognitive perspective. For the first, transitive inference behavior, it appears that non-cognitive accounts cannot satisfactorily…

  14. Anatomical eponyms - unloved names in medical terminology.

    Science.gov (United States)

    Burdan, F; Dworzański, W; Cendrowska-Pinkosz, M; Burdan, M; Dworzańska, A

    2016-01-01

    Uniform international terminology is a fundamental issue of medicine. Names of various organs or structures have developed since early human history. The first proper anatomical books were written by Hippocrates, Aristotle and Galen. For this reason the modern terms originated from Latin or Greek. In a modern time the terminology was improved in particular by Vasalius, Fabricius and Harvey. Presently each known structure has internationally approved term that is explained in anatomical or histological terminology. However, some elements received eponyms, terms that incorporate the surname of the people that usually describe them for the first time or studied them (e.g., circle of Willis, follicle of Graff, fossa of Sylvious, foramen of Monro, Adamkiewicz artery). Literature and historical hero also influenced medical vocabulary (e.g. Achilles tendon and Atlas). According to various scientists, all the eponyms bring colour to medicine, embed medical traditions and culture to our history but lack accuracy, lead of confusion, and hamper scientific discussion. The current article presents a wide list of the anatomical eponyms with their proper anatomical term or description according to international anatomical terminology. However, since different eponyms are used in various countries, the list could be expanded.

  15. The National Terminology Services: A New Paradigm

    African Journals Online (AJOL)

    graphy are discussed, as well as strategies being implemented to overcome them. ... languages, products have to be adapted, changing terminology needs have to ... wards the promotion of mutual scientific and technical communication in South Africa in this way. .... Civil servants are notorious for their resistance to change.

  16. Citizen Science Terminology Matters: Exploring Key Terms

    NARCIS (Netherlands)

    Eitzel, M.V.; Cappadonna, Jessica L.; Santos-Lang, Chris; Duerr, Ruth Ellen; Virapongse, Arika; West, Sarah Elizabeth; Kyba, Christopher Conrad Maximillian; Bowser, Anne; Cooper, Caren Beth; Sforzi, Andrea; Metcalfe, Anya Nova; Harris, Edward S.; Thiel, Martin; Haklay, Mordechai; Ponciano, Lesandro; Roche, Joseph; Ceccaroni, Luigi; Shilling, Fraser Mark; Dörler, Daniel; Heigl, Florian; Kiessling, Tim; Davis, Brittany Y.; Jiang, Qijun

    2017-01-01

    Much can be at stake depending on the choice of words used to describe citizen science, because terminology impacts how knowledge is developed. Citizen science is a quickly evolving field that is mobilizing people’s involvement in information development, social action and justice, and large-scale

  17. Current terminology and diagnostic classification schemes.

    Science.gov (United States)

    Okeson, J P

    1997-01-01

    This article reviews the current terminology and classification schemes available for temporomandibular disorders. The origin of each term is presented, and the classification schemes that have been offered for temporomandibular disorders are briefly reviewed. Several important classifications are presented in more detail, with mention of advantages and disadvantages. Final recommendations are provided for future direction in the area of classification schemes.

  18. Risk assessment terminology: risk communication part 1

    Directory of Open Access Journals (Sweden)

    Gaetano Liuzzo

    2016-03-01

    Full Text Available The paper describes the terminology of risk communication in the view of food safety: the theory of stakeholders, the citizens’ involvement and the community interest and consultation are reported. Different aspects of risk communication (public communication, scientific uncertainty, trust, care, consensus and crisis communication are discussed.

  19. Terminology extraction from medical texts in Polish.

    Science.gov (United States)

    Marciniak, Małgorzata; Mykowiecka, Agnieszka

    2014-01-01

    Hospital documents contain free text describing the most important facts relating to patients and their illnesses. These documents are written in specific language containing medical terminology related to hospital treatment. Their automatic processing can help in verifying the consistency of hospital documentation and obtaining statistical data. To perform this task we need information on the phrases we are looking for. At the moment, clinical Polish resources are sparse. The existing terminologies, such as Polish Medical Subject Headings (MeSH), do not provide sufficient coverage for clinical tasks. It would be helpful therefore if it were possible to automatically prepare, on the basis of a data sample, an initial set of terms which, after manual verification, could be used for the purpose of information extraction. Using a combination of linguistic and statistical methods for processing over 1200 children hospital discharge records, we obtained a list of single and multiword terms used in hospital discharge documents written in Polish. The phrases are ordered according to their presumed importance in domain texts measured by the frequency of use of a phrase and the variety of its contexts. The evaluation showed that the automatically identified phrases cover about 84% of terms in domain texts. At the top of the ranked list, only 4% out of 400 terms were incorrect while out of the final 200, 20% of expressions were either not domain related or syntactically incorrect. We also observed that 70% of the obtained terms are not included in the Polish MeSH. Automatic terminology extraction can give results which are of a quality high enough to be taken as a starting point for building domain related terminological dictionaries or ontologies. This approach can be useful for preparing terminological resources for very specific subdomains for which no relevant terminologies already exist. The evaluation performed showed that none of the tested ranking procedures were

  20. Querying Schemas With Access Restrictions

    CERN Document Server

    Benedikt, Michael; Ley, Clemens

    2012-01-01

    We study verification of systems whose transitions consist of accesses to a Web-based data-source. An access is a lookup on a relation within a relational database, fixing values for a set of positions in the relation. For example, a transition can represent access to a Web form, where the user is restricted to filling in values for a particular set of fields. We look at verifying properties of a schema describing the possible accesses of such a system. We present a language where one can describe the properties of an access path, and also specify additional restrictions on accesses that are enforced by the schema. Our main property language, AccLTL, is based on a first-order extension of linear-time temporal logic, interpreting access paths as sequences of relational structures. We also present a lower-level automaton model, Aautomata, which AccLTL specifications can compile into. We show that AccLTL and A-automata can express static analysis problems related to "querying with limited access patterns" that h...

  1. Query-By-Keywords (QBK): Query Formulation Using Semantics and Feedback

    Science.gov (United States)

    Telang, Aditya; Chakravarthy, Sharma; Li, Chengkai

    The staples of information retrieval have been querying and search, respectively, for structured and unstructured repositories. Processing queries over known, structured repositories (e.g., Databases) has been well-understood, and search has become ubiquitous when it comes to unstructured repositories (e.g., Web). Furthermore, searching structured repositories has been explored to a limited extent. However, there is not much work in querying unstructured sources. We argue that querying unstructured sources is the next step in performing focused retrievals. This paper proposed a new approach to generate queries from search-like inputs for unstructured repositories. Instead of burdening the user with schema details, we believe that pre-discovered semantic information in the form of taxonomies, relationship of keywords based on context, and attribute & operator compatibility can be used to generate query skeletons. Furthermore, progressive feedback from users can be used to improve the accuracy of query skeletons generated.

  2. La terminologie de l'entreprise (Business Terminology)

    Science.gov (United States)

    Kerpan, Nada

    1975-01-01

    Terminology has been existing as an autonomous activity for only fifteen In private industry more than in the public sector, it has been diff years. icult to have the importance of a terminology acknowledged. The relation of terminology to translation is discussed, as well as the task of the terminologist. (Text is in French.) (AM)

  3. The impact of EU law on Belgian consumer law terminology

    NARCIS (Netherlands)

    Cauffman, C.

    2012-01-01

    The implementation of EU directives in the field of consumer law distorted the Belgian legal terminology. In particular, consumer law terminology often differs from civil law terminology. The meaning of traditional civil law concepts is no longer respected in the field of consumer law. Moreover, the

  4. 17 CFR 210.4-01 - Form, order, and terminology.

    Science.gov (United States)

    2010-04-01

    ... 17 Commodity and Securities Exchanges 2 2010-04-01 2010-04-01 false Form, order, and terminology...-01 Form, order, and terminology. (a) Financial statements should be filed in such form and order, and should use such generally accepted terminology, as will best indicate their significance and character...

  5. 9 CFR 145.8 - Terminology and classification; general.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification... General Provisions § 145.8 Terminology and classification; general. (a) The official classification terms... identity under Plan terminology when they are purchased for resale by or consigned to nonparticipants....

  6. Special Education Terminology Every Physical Education Teacher Should Know

    Science.gov (United States)

    Columna, Luis; Lieberman, Lauren J.; Lytle, Rebecca; Arndt, Katrina

    2014-01-01

    An initial step to demonstrate commitment and professional behaviors is to be knowledgeable in the terminology used by special education colleagues, and to share with them common terminology used in physical education settings. Adapted physical education (APE) and general physical education (GPE) teachers need to know terminology used by…

  7. The impact of EU law on Belgian consumer law terminology

    NARCIS (Netherlands)

    Cauffman, C.

    2012-01-01

    The implementation of EU directives in the field of consumer law distorted the Belgian legal terminology. In particular, consumer law terminology often differs from civil law terminology. The meaning of traditional civil law concepts is no longer respected in the field of consumer law. Moreover, the

  8. Spatial information semantic query based on SPARQL

    Science.gov (United States)

    Xiao, Zhifeng; Huang, Lei; Zhai, Xiaofang

    2009-10-01

    How can the efficiency of spatial information inquiries be enhanced in today's fast-growing information age? We are rich in geospatial data but poor in up-to-date geospatial information and knowledge that are ready to be accessed by public users. This paper adopts an approach for querying spatial semantic by building an Web Ontology language(OWL) format ontology and introducing SPARQL Protocol and RDF Query Language(SPARQL) to search spatial semantic relations. It is important to establish spatial semantics that support for effective spatial reasoning for performing semantic query. Compared to earlier keyword-based and information retrieval techniques that rely on syntax, we use semantic approaches in our spatial queries system. Semantic approaches need to be developed by ontology, so we use OWL to describe spatial information extracted by the large-scale map of Wuhan. Spatial information expressed by ontology with formal semantics is available to machines for processing and to people for understanding. The approach is illustrated by introducing a case study for using SPARQL to query geo-spatial ontology instances of Wuhan. The paper shows that making use of SPARQL to search OWL ontology instances can ensure the result's accuracy and applicability. The result also indicates constructing a geo-spatial semantic query system has positive efforts on forming spatial query and retrieval.

  9. Query Optimizations over Decentralized RDF Graphs

    KAUST Repository

    Abdelaziz, Ibrahim

    2017-05-18

    Applications in life sciences, decentralized social networks, Internet of Things, and statistical linked dataspaces integrate data from multiple decentralized RDF graphs via SPARQL queries. Several approaches have been proposed to optimize query processing over a small number of heterogeneous data sources by utilizing schema information. In the case of schema similarity and interlinks among sources, these approaches cause unnecessary data retrieval and communication, leading to poor scalability and response time. This paper addresses these limitations and presents Lusail, a system for scalable and efficient SPARQL query processing over decentralized graphs. Lusail achieves scalability and low query response time through various optimizations at compile and run times. At compile time, we use a novel locality-aware query decomposition technique that maximizes the number of query triple patterns sent together to a source based on the actual location of the instances satisfying these triple patterns. At run time, we use selectivity-awareness and parallel query execution to reduce network latency and to increase parallelism by delaying the execution of subqueries expected to return large results. We evaluate Lusail using real and synthetic benchmarks, with data sizes up to billions of triples on an in-house cluster and a public cloud. We show that Lusail outperforms state-of-the-art systems by orders of magnitude in terms of scalability and response time.

  10. Patient and physician asthma deterioration terminology: results from the 2009 Asthma Insight and Management survey.

    Science.gov (United States)

    Blaiss, Michael S; Nathan, Robert A; Stoloff, Stuart W; Meltzer, Eli O; Murphy, Kevin R; Doherty, Dennis E

    2012-01-01

    Long-term achievement of asthma control is dependent in part on the use of mutually understandable asthma terminology in all verbal and written patient-physician communications. Using data from the Asthma Insight and Management (AIM) survey, the objective of this analysis is to provide a contemporary depiction of asthma deterioration terminology as used by current asthma patients and physicians in the United States. As part of the 2009 AIM survey, current asthma patients (≥12 years of age; weighted n = 2499) and physicians (n = 309) were queried about their recognition, understanding, and/or use of the terms "asthma attack," "asthma flare-up," and "asthma exacerbation" in telephone interviews. Nearly all patients had heard the term "asthma attack" (97%), but relatively few had heard the term "asthma exacerbation" (24%); 71% had heard "asthma flare-up." In contrast, physicians reported using the term "asthma attack" least (65%) and the term "asthma exacerbation" most (77%) when discussing asthma with their patients; 70% reported using "asthma flare-up." Among patients familiar with "asthma flare-up" and "asthma exacerbation" (n = 502), only 38% said that the terms mean the same thing; nearly all physicians (94%) said that the terms mean the same thing. Collectively, data from the AIM survey suggest that patients and physicians use different asthma deterioration terminology and, more importantly, that they do not necessarily understand each other's terms. Standardizing asthma deterioration terminology may help optimize asthma patient-physician communication to improve patient understanding of written asthma action plans and therefore, enhance patient outcomes.

  11. Biomedical engineering fundamentals

    CERN Document Server

    Bronzino, Joseph D

    2014-01-01

    Known as the bible of biomedical engineering, The Biomedical Engineering Handbook, Fourth Edition, sets the standard against which all other references of this nature are measured. As such, it has served as a major resource for both skilled professionals and novices to biomedical engineering.Biomedical Engineering Fundamentals, the first volume of the handbook, presents material from respected scientists with diverse backgrounds in physiological systems, biomechanics, biomaterials, bioelectric phenomena, and neuroengineering. More than three dozen specific topics are examined, including cardia

  12. Biofield Science and Healing: History, Terminology, and Concepts.

    Science.gov (United States)

    Rubik, Beverly; Muehsam, David; Hammerschlag, Richard; Jain, Shamini

    2015-11-01

    Biofield science is an emerging field of study that aims to provide a scientific foundation for understanding the complex homeodynamic regulation of living systems. By furthering our scientific knowledge of the biofield, we arrive at a better understanding of the foundations of biology as well as the phenomena that have been described as "energy medicine." Energy medicine, the application of extremely low-level signals to the body, including energy healer interventions and bio-electromagnetic device-based therapies, is incomprehensible from the dominant biomedical paradigm of "life as chemistry." The biofield or biological field, a complex organizing energy field engaged in the generation, maintenance, and regulation of biological homeodynamics, is a useful concept that provides the rudiments of a scientific foundation for energy medicine and thereby advances the research and practice of it. An overview on the biofield is presented in this paper, with a focus on the history of the concept, related terminology, key scientific concepts, and the value of the biofield perspective for informing future research.

  13. Complexity of temporal query abduction in DL-Lite

    CSIR Research Space (South Africa)

    Klarman, S

    2014-07-01

    Full Text Available and Temporal Query Language, based on the combination of LTL with conjunctive queries. In this defined setting, we study the complexity of temporal query abduction, assuming different restrictions on the problem and minimality criteria for abductive solutions...

  14. Query Through Heterogeneous Ontologies Using Association Matrix

    Institute of Scientific and Technical Information of China (English)

    KANG Da-zhou; XU Bao-wen; LU Jian-jiang; WANG Peng; LI Yan-hui

    2004-01-01

    This paper introduces the definition and calculation of the association matrix between ontologies.It uses the association matrix to describe the relations between concepts in different ontologies and uses concept vectors to represent queries; then computes the vectors with the association matrix in order to rewrite queries.This paper proposes a simple method of querying through heterogeneous Ontology using association matrix.This method is based on the correctness of approximate information filtering theory; and it is simple to be implemented and expected to run quite fast.

  15. Instant MDX queries for SQL Server 2012

    CERN Document Server

    Emond, Nicholas

    2013-01-01

    Get to grips with a new technology, understand what it is and what it can do for you, and then get to work with the most important features and tasks. This short, focused guide is a great way to get stated with writing MDX queries. New developers can use this book as a reference for how to use functions and the syntax of a query as well as how to use Calculated Members and Named Sets.This book is great for new developers who want to learn the MDX query language from scratch and install SQL Server 2012 with Analysis Services

  16. Relative aggregation operator in database fuzzy querying

    Directory of Open Access Journals (Sweden)

    Luminita DUMITRIU

    2005-12-01

    Full Text Available Fuzzy selection criteria querying relational databases include vague terms; they usually refer linguistic values form the attribute linguistic domains, defined as fuzzy sets. Generally, when a vague query is processed, the definitions of vague terms must already exist in a knowledge base. But there are also cases when vague terms must be dynamically defined, when a particular operation is used to aggregate simple criteria in a complex selection. The paper presents a new aggregation operator and the corresponding algorithm to evaluate the fuzzy query.

  17. Provenance Storage, Querying, and Visualization in PBase

    Energy Technology Data Exchange (ETDEWEB)

    Kianmajd, Parisa [University of California, Davis; Ludascher, Bertram [University of California, Davis; Missier, Paolo [Newcastle University, UK; Chirigati, Fernando [New York University; Wei, Yaxing [ORNL; Koop, David [New York University; Dey, Saumen [University of California, Davis

    2015-01-01

    We present PBase, a repository for scientific workflows and their corresponding provenance information that facilitates the sharing of experiments among the scientific community. PBase is interoperable since it uses ProvONE, a standard provenance model for scientific workflows. Workflows and traces are stored in RDF, and with the support of SPARQL and the tree cover encoding, the repository provides a scalable infrastructure for querying the provenance data. Furthermore, through its user interface, it is possible to: visualize workflows and execution traces; visualize reachability relations within these traces; issue SPARQL queries; and visualize query results.

  18. Query Load Balancing For Visible Object Extraction

    DEFF Research Database (Denmark)

    Bukauskas, Linas; Bøhlen, Michael Hanspeter

    2004-01-01

    Interactive visual data explorations impose rigid real-time requirements on the extraction of visible objects. Often these requirements are met by deploying powerful hardware that maintains the entire data set in huge main memory structures. In this paper we propose an approach that retrieves...... objects along the path. The visible objects are retrieved incrementally, and it is possible to precisely control the query load and the number of retrieved objects. The minimal distance path method issues frequent queries and retrieves the lowest possible number of objects at each query point. The end...

  19. Evaluating Trajectory Queries over Imprecise Location Data

    DEFF Research Database (Denmark)

    Xie, Scott, Xike; Cheng, Reynold; Yiu, Man Lung

    2012-01-01

    Trajectory queries, which retrieve nearby objects for every point of a given route, can be used to identify alerts of potential threats along a vessel route, or monitor the adjacent rescuers to a travel path. However, the locations of these objects (e.g., threats, succours) may not be precisely......, the query is quite time-consuming, since all the points on the trajectory are considered. In this paper, we study how to efficiently evaluate trajectory queries over imprecise location data, by proposing a new concept called the u-bisector. In general, the u-bisector is an extension of bisector to handle...

  20. Federated query processing for the semantic web

    CERN Document Server

    Buil-Aranda, C

    2014-01-01

    During the last years, the amount of RDF data has increased exponentially over the Web, exposed via SPARQL endpoints. These SPARQL endpoints allow users to direct SPARQL queries to the RDF data. Federated SPARQL query processing allows to query several of these RDF databases as if they were a single one, integrating the results from all of them. This is a key concept in the Web of Data and it is also a hot topic in the community. Besides of that, the W3C SPARQL-WG has standardized it in the new Recommendation SPARQL 1.1.This book provides a formalisation of the W3C proposed recommendation. Thi

  1. Responsive web design with jQuery

    CERN Document Server

    Carlos, Gilberto

    2013-01-01

    Responsive Web Design with jQuery follows a standard tutorial-based approach, covering various aspects of responsive web design by building a comprehensive website.""Responsive Web Design with jQuery"" is aimed at web designers who are interested in building device-agnostic websites. You should have a grasp of standard HTML, CSS, and JavaScript development, and have a familiarity with graphic design. Some exposure to jQuery and HTML5 will be beneficial but isn't essential.

  2. Discovering biomedical relations utilizing the World-wide Web.

    Science.gov (United States)

    Mukherjea, Sougata; Sahay, Saurav

    2006-01-01

    To crate a Semantic Web for Life Sciences discovering relations between biomedical entities is essential. Journals and conference proceedings represent the dominant mechanisms of reporting newly discovered biomedical interactions. The unstructured nature of such publications makes it difficult to utilize data mining or knowledge discovery techniques to automatically incorporate knowledge from these publications into the ontologies. On the other hand, since biomedical information is growing explosively, it is difficult to have human curators manually extract all the information from literature. In this paper we present techniques to automatically discover biomedical relations from the World-wide Web. For this purpose we retrieve relevant information from Web Search engines using various lexico-syntactic patterns as queries. Experiments are presented to show the usefulness of our techniques.

  3. OntoQuery: easy-to-use web-based OWL querying.

    Science.gov (United States)

    Tudose, Ilinca; Hastings, Janna; Muthukrishnan, Venkatesh; Owen, Gareth; Turner, Steve; Dekker, Adriano; Kale, Namrata; Ennis, Marcus; Steinbeck, Christoph

    2013-11-15

    The Web Ontology Language (OWL) provides a sophisticated language for building complex domain ontologies and is widely used in bio-ontologies such as the Gene Ontology. The Protégé-OWL ontology editing tool provides a query facility that allows composition and execution of queries with the human-readable Manchester OWL syntax, with syntax checking and entity label lookup. No equivalent query facility such as the Protégé Description Logics (DL) query yet exists in web form. However, many users interact with bio-ontologies such as chemical entities of biological interest and the Gene Ontology using their online Web sites, within which DL-based querying functionality is not available. To address this gap, we introduce the OntoQuery web-based query utility.  The source code for this implementation together with instructions for installation is available at http://github.com/IlincaTudose/OntoQuery. OntoQuery software is fully compatible with all OWL-based ontologies and is available for download (CC-0 license). The ChEBI installation, ChEBI OntoQuery, is available at http://www.ebi.ac.uk/chebi/tools/ontoquery. hastings@ebi.ac.uk.

  4. Semantic Normalization and Query Abstraction Based on SNOMED-CT and HL7: Supporting Multicentric Clinical Trials.

    Science.gov (United States)

    Paraiso-Medina, Sergio; Perez-Rey, David; Bucur, Anca; Claerhout, Brecht; Alonso-Calvo, Raul

    2015-05-01

    Advances in the use of omic data and other biomarkers are increasing the number of variables in clinical research. Additional data have stratified the population of patients and require that current studies be performed among multiple institutions. Semantic interoperability and standardized data representation are a crucial task in the management of modern clinical trials. In the past few years, different efforts have focused on integrating biomedical information. Due to the complexity of this domain and the specific requirements of clinical research, the majority of data integration tasks are still performed manually. This paper presents a semantic normalization process and a query abstraction mechanism to facilitate data integration and retrieval. A process based on well-established standards from the biomedical domain and the latest semantic web technologies has been developed. Methods proposed in this paper have been tested within the EURECA EU research project, where clinical scenarios require the extraction of semantic knowledge from biomedical vocabularies. The aim of this paper is to provide a novel method to abstract from the data model and query syntax. The proposed approach has been compared with other initiatives in the field by storing the same dataset with each of those solutions. Results show an extended functionality and query capabilities at the cost of slightly worse performance in query execution. Implementations in real settings have shown that following this approach, usable interfaces can be developed to exploit clinical trial data outcomes.

  5. Schedule Sales Query Report Generation System

    Data.gov (United States)

    General Services Administration — Schedule Sales Query presents sales volume figures as reported to GSA by contractors. The reports are generated as quarterly reports for the current year and the...

  6. Clean Air Markets - Compliance Query Wizard

    Data.gov (United States)

    U.S. Environmental Protection Agency — The Compliance Query Wizard is part of a suite of Clean Air Markets-related tools that are accessible at http://ampd.epa.gov/ampd/. The Compliance module provides...

  7. Business information query expansion through semantic network

    Science.gov (United States)

    Gong, Zhiguo; Muyeba, Maybin; Guo, Jingzhi

    2010-02-01

    In this article, we propose a method for business information query expansions. In our approach, hypernym/hyponymy and synonym relations in WordNet are used as the basic expansion rules. Then we use WordNet Lexical Chains and WordNet semantic similarity to assign terms in the same query into different groups with respect to their semantic similarities. For each group, we expand the highest terms in the WordNet hierarchies with hypernym and synonym, the lowest terms with hyponym and synonym and all other terms with only synonym. In this way, the contradictory caused by full expansion can be well controlled. Furthermore, we use collection-related term semantic network to further improve the expansion performance. And our experiment reveals that our solution for query expansion can improve the query performance dramatically.

  8. Mining tree-query associations in graphs

    CERN Document Server

    Hoekx, Eveline

    2010-01-01

    New applications of data mining, such as in biology, bioinformatics, or sociology, are faced with large datasetsstructured as graphs. We introduce a novel class of tree-shapedpatterns called tree queries, and present algorithms for miningtree queries and tree-query associations in a large data graph. Novel about our class of patterns is that they can containconstants, and can contain existential nodes which are not counted when determining the number of occurrences of the patternin the data graph. Our algorithms have a number of provableoptimality properties, which are based on the theory of conjunctive database queries. We propose a practical, database-oriented implementation in SQL, and show that the approach works in practice through experiments on data about food webs, protein interactions, and citation analysis.

  9. Medical Expenditure Panel Survey (MEPS) Query Tool

    Data.gov (United States)

    U.S. Department of Health & Human Services — MEPSnet HC Query Tool MEPSnet/Household Component provides easy access to nationally representative statistics of health care use, expenditures, sources of payment,...

  10. Range Query Processing in Multidisk Systems

    Institute of Scientific and Technical Information of China (English)

    李建中

    1992-01-01

    In order to reduce the disk access time,a database can be stored on several simultaneously accessible disks.In this paper,we are concerned with the dynamic d-attribute database allocation problem for range queries,An allocation method,called coordinate moule allocation method,is proposed to allocate data in a d-attribute database among disks so that the maximum disk accessing concurrency can be achieved for range queries.Our analysis and experiments show that the method achieves the optimum or near-optimum parallelism for range queries.The paper offers the conditions under which the method is optimal .The worst case bounds of the performance of the method are also given.In addition,the parallel algorithm of processing range queries in described at the end of the paper.The method has been used in the statistic and scientific database management system whic is being designed by us.

  11. Efficient Probabilistic Inference with Partial Ranking Queries

    CERN Document Server

    Huang, Jonathan; Guestrin, Carlos E

    2012-01-01

    Distributions over rankings are used to model data in various settings such as preference analysis and political elections. The factorial size of the space of rankings, however, typically forces one to make structural assumptions, such as smoothness, sparsity, or probabilistic independence about these underlying distributions. We approach the modeling problem from the computational principle that one should make structural assumptions which allow for efficient calculation of typical probabilistic queries. For ranking models, "typical" queries predominantly take the form of partial ranking queries (e.g., given a user's top-k favorite movies, what are his preferences over remaining movies?). In this paper, we argue that riffled independence factorizations proposed in recent literature [7, 8] are a natural structural assumption for ranking distributions, allowing for particularly efficient processing of partial ranking queries.

  12. Mobile Information Access with Spoken Query Answering

    DEFF Research Database (Denmark)

    Brøndsted, Tom; Larsen, Henrik Legind; Larsen, Lars Bo

    2006-01-01

    This paper addresses the problem of information and service accessibility in mobile devices with limited resources. A solution is developed and tested through a prototype that applies state-of-the-art Distributed Speech Recognition (DSR) and knowledge-based Information Retrieval (IR) processing...... for spoken query answering. For the DSR part, a configurable DSR system is implemented on the basis of the ETSI-DSR advanced front-end and the SPHINX IV recognizer. For the knowledge-based IR part, a distributed system solution is developed for fast retrieval of the most relevant documents, with a text...... window focused over the part which most likely contains an answer to the query. The two systems are integrated into a full spoken query answering system. The prototype can answer queries and questions within the chosen football (soccer) test domain, but the system has the flexibility for being ported...

  13. Querying temporal databases via OWL 2 QL

    CSIR Research Space (South Africa)

    Klarman, S

    2014-06-01

    Full Text Available SQL:2011, the most recently adopted version of the SQL query language, has unprecedentedly standardized the representation of temporal data in relational databases. Following the successful paradigm of ontology-based data access, we develop a...

  14. Search Result Diversification Based on Query Facets

    Institute of Scientific and Technical Information of China (English)

    胡莎; 窦志成; 王晓捷; 继荣

    2015-01-01

    In search engines, different users may search for different information by issuing the same query. To satisfy more users with limited search results, search result diversification re-ranks the results to cover as many user intents as possible. Most existing intent-aware diversification algorithms recognize user intents as subtopics, each of which is usually a word, a phrase, or a piece of description. In this paper, we leverage query facets to understand user intents in diversification, where each facet contains a group of words or phrases that explain an underlying intent of a query. We generate subtopics based on query facets and propose faceted diversification approaches. Experimental results on the public TREC 2009 dataset show that our faceted approaches outperform state-of-the-art diversification models.

  15. A Query Language for Formal Mathematical Libraries

    CERN Document Server

    Rabe, Florian

    2012-01-01

    One of the most promising applications of mathematical knowledge management is search: Even if we restrict attention to the tiny fragment of mathematics that has been formalized, the amount exceeds the comprehension of an individual human. Based on the generic representation language MMT, we introduce the mathematical query language QMT: It combines simplicity, expressivity, and scalability while avoiding a commitment to a particular logical formalism. QMT can integrate various search paradigms such as unification, semantic web, or XQuery style queries, and QMT queries can span different mathematical libraries. We have implemented QMT as a part of the MMT API. This combination provides a scalable indexing and query engine that can be readily applied to any library of mathematical knowledge. While our focus here is on libraries that are available in a content markup language, QMT naturally extends to presentation and narration markup languages.

  16. Clean Air Markets - Allowances Query Wizard

    Data.gov (United States)

    U.S. Environmental Protection Agency — The Allowances Query Wizard is part of a suite of Clean Air Markets-related tools that are accessible at http://camddataandmaps.epa.gov/gdm/index.cfm. The Allowances...

  17. Terminology of the Newest Technologies and Computering

    Directory of Open Access Journals (Sweden)

    Angelė Kaulakienė

    2011-04-01

    Full Text Available The thirty-five-year period of computer terminology has to be considered the initial stage of its evolution where synonymy and variability are characteristic features, which are usually determined by both extra-linguistic and linguistic factors. The choice of borrowed or Lithuanian terms is often determined by the relationship between borrowed and Lithuanian terms. The first stage of the newest dictionaries of computer terms approbated by the Commission of the Lithuanian Language shows that the terminology of the mentioned field is being systematized and normalized. However, the ratio between Lithuanian and borrowed terms is not fully acceptable yet, and it is partially determined by disagreement among specialists on the status of synonymous terms and the choice of them.

  18. Terminological Ontologies for Risk and Vulnerability Analysis

    DEFF Research Database (Denmark)

    Madsen, Bodil Nistrup; Erdman Thomsen, Hanne

    2014-01-01

    Risk and vulnerability analyses are an important preliminary stage in civil contingency planning. The Danish Emergency Management Agency has developed a generic model and a set of tools that may be used in the preparedness planning, i.e. for identifying and describing society’s critical functions......, for formulating threat scenarios and for assessing consequences. Terminological ontologies, which are systems of domain specific concepts comprising concept relations and characteristics, are useful, both when describing the central concepts of risk and vulnerability analysis (meta concepts), and for further...... structuring and enriching the taxonomies of society’s critical functions and threats, which form an important part of the model. Creating terminological ontologies is a time consuming work, and therefore there is a need for automatic tools for extraction of terms, concept relations and characteristics...

  19. Building a biomedical ontology recommender web service.

    Science.gov (United States)

    Jonquet, Clement; Musen, Mark A; Shah, Nigam H

    2010-06-22

    Researchers in biomedical informatics use ontologies and terminologies to annotate their data in order to facilitate data integration and translational discoveries. As the use of ontologies for annotation of biomedical datasets has risen, a common challenge is to identify ontologies that are best suited to annotating specific datasets. The number and variety of biomedical ontologies is large, and it is cumbersome for a researcher to figure out which ontology to use. We present the Biomedical Ontology Recommender web service. The system uses textual metadata or a set of keywords describing a domain of interest and suggests appropriate ontologies for annotating or representing the data. The service makes a decision based on three criteria. The first one is coverage, or the ontologies that provide most terms covering the input text. The second is connectivity, or the ontologies that are most often mapped to by other ontologies. The final criterion is size, or the number of concepts in the ontologies. The service scores the ontologies as a function of scores of the annotations created using the National Center for Biomedical Ontology (NCBO) Annotator web service. We used all the ontologies from the UMLS Metathesaurus and the NCBO BioPortal. We compare and contrast our Recommender by an exhaustive functional comparison to previously published efforts. We evaluate and discuss the results of several recommendation heuristics in the context of three real world use cases. The best recommendations heuristics, rated 'very relevant' by expert evaluators, are the ones based on coverage and connectivity criteria. The Recommender service (alpha version) is available to the community and is embedded into BioPortal.

  20. Evaluating SPARQL queries on massive RDF datasets

    KAUST Repository

    Al-Harbi, Razen

    2015-08-01

    Distributed RDF systems partition data across multiple computer nodes. Partitioning is typically based on heuristics that minimize inter-node communication and it is performed in an initial, data pre-processing phase. Therefore, the resulting partitions are static and do not adapt to changes in the query workload; as a result, existing systems are unable to consistently avoid communication for queries that are not favored by the initial data partitioning. Furthermore, for very large RDF knowledge bases, the partitioning phase becomes prohibitively expensive, leading to high startup costs. In this paper, we propose AdHash, a distributed RDF system which addresses the shortcomings of previous work. First, AdHash initially applies lightweight hash partitioning, which drastically minimizes the startup cost, while favoring the parallel processing of join patterns on subjects, without any data communication. Using a locality-aware planner, queries that cannot be processed in parallel are evaluated with minimal communication. Second, AdHash monitors the data access patterns and adapts dynamically to the query load by incrementally redistributing and replicating frequently accessed data. As a result, the communication cost for future queries is drastically reduced or even eliminated. Our experiments with synthetic and real data verify that AdHash (i) starts faster than all existing systems, (ii) processes thousands of queries before other systems become online, and (iii) gracefully adapts to the query load, being able to evaluate queries on billion-scale RDF data in sub-seconds. In this demonstration, audience can use a graphical interface of AdHash to verify its performance superiority compared to state-of-the-art distributed RDF systems.

  1. Nearest Neighbor Queries in Road Networks

    DEFF Research Database (Denmark)

    Jensen, Christian Søndergaard; Kolar, Jan; Pedersen, Torben Bach

    2003-01-01

    With wireless communications and geo-positioning being widely available, it becomes possible to offer new e-services that provide mobile users with information about other mobile objects. This paper concerns active, ordered k-nearest neighbor queries for query and data objects that are moving...... for the nearest neighbor search in the prototype is presented in detail. In addition, the paper reports on results from experiments with the prototype system....

  2. Processing keyword queries under access limitations

    OpenAIRE

    Calì, Andrea; Martinenghi, D.; Torlone, R.

    2015-01-01

    The Deep Web is constituted by data accessible through Web pages, but not readily indexable by search engines, as they are returned in dynamic pages. In this paper we propose a framework for accessing Deep Web sources, represented as relational tables with so-called access limitations, with keyword-based queries. We formalize the notion of optimal answer and propose methods for query processing. To the best of our knowledge, ours is the first systematic approach to keyword search in such cont...

  3. Human subjects protection issues in QUERI implementation research: QUERI Series

    Directory of Open Access Journals (Sweden)

    Ritchie Mona

    2008-02-01

    unnecessary standards to implementation research that are not consistent with the spirit of the Belmont Report (a summary of basic ethical principles identified by the National Commission for the Protection of Human Subjects of Biomedical and Behavioral Research, and which impede the conduct of evidence-based quality improvement research. While there are promising developments in the IRB community, it is incumbent upon implementation researchers to interact with IRBs in a manner that assists appropriate risk-benefit determinations and helps prevent the process from having a negative impact on efforts to reduce the lag in implementing best practices.

  4. SYNONYMY AND ANTONYMY IN TERMINOLOGY OF SPORT

    Directory of Open Access Journals (Sweden)

    Nebojsa Randjelovic

    2009-11-01

    Full Text Available The base of anatomy is exists of qualitative attribute in the meaning of words which might to increase or decrease and to come to the confrontation. Antonyms are especially in use in literal language for expressing of outstanding contrast. In technical science terminology antonymic is even more important then in standard language, beca- use in recognizing of things and concepts antonymic opposition appears

  5. CONFUSION OF ACCOUNTING TERMINOLOGY IN LITHUANIA

    Directory of Open Access Journals (Sweden)

    Gintaras Černius

    2011-10-01

    Full Text Available This article presents an analysis of issues relevant to the science of finances and the practical side of this field related to financial terms. The article is written with the purpose of helping solve terminology problems of accounting which is viewed as a scientific and practical activity field. The goals of this article are to reveal the current problems of financial terminology in the field of accounting, analyze the reasons of their occurrence, determine the possible and existing negative consequences of the use of incorrect terms in the scientific and practical fields and foresee possible solutions of such problems while aiming to negate or at least reduce its impact. The relevance of the article is that the problem of accounting terms that has been discussed only sporadically is now analyzed entirely starting from its rise and development and encompassing modern times. One of the more significant results of this article is evident proof that the use of incorrect terms has negative impact upon the results provided in financial reports. Also, based on the article, certain conclusions were formed which foresee possible solutions to the analyzed terminology problems occurring in scientific literature and practice.

  6. Cardiovascular magnetic resonance: physics and terminology.

    Science.gov (United States)

    Rodgers, Christopher T; Robson, Matthew D

    2011-01-01

    Cardiovascular magnetic resonance (CMR) is the branch of magnetic resonance imaging (MRI) whose acquisition methods are adapted to surmount the particular challenges caused by motion of the heart and blood in vivo. Magnetic resonance imaging is supremely flexible; it can produce images showing the spatial distribution of diverse tissue characteristics, for example, proton density, T(1), T(2), T(2)(⁎), fat concentration, flow rate, and diffusion parameters. The image contrast may usefully be modified by intravenous infusion of contrast agents. Magnetic resonance imaging permits 2-dimensional or 3-dimensional acquisitions with arbitrary slice orientation. Unfortunately, MRI's flexibility is matched by a remarkable complexity not only in its fundamental principles but also in the optimization of applications in the clinic. This article attempts to demystify the basic principles of CMR and provides a primer on the terminology used in CMR. Complete confidence in the principles of CMR is not essential to use the technology. Nevertheless, knowledge of the principal terminology of MRI is a valuable first step when seeking to understand and apply modern methods in a clinical or research setting. Thus, the article closes with a glossary of terminology and references to high-quality educational resources. Copyright © 2011 Elsevier Inc. All rights reserved.

  7. Implementing Graph Pattern Queries on a Relational Database

    Energy Technology Data Exchange (ETDEWEB)

    Kaplan, I L; Abdulla, G M; Brugger, S T; Kohn, S R

    2007-12-26

    When a graph database is implemented on top of a relational database, queries in the graph query language are translated into relational SQL queries. Graph pattern queries are an important feature of a graph query language. Translating graph pattern queries into single SQL statements results in very poor query performance. By taking into account the pattern query structure and generating multiple SQL statements, pattern query performance can be dramatically improved. The performance problems encountered with the single SQL statements generated for pattern queries reflects a problem in the SQL query planner and optimizer. Addressing this problem would allow relational databases to better support semantic graph databases. Relational database systems that provide good support for graph databases may also be more flexible platforms for data warehouses.

  8. k-Nearest Neighbor Query Processing Algorithms for a Query Region in Road Networks

    Institute of Scientific and Technical Information of China (English)

    Hyeong-Il Kim; Jae-Woo Chang

    2013-01-01

    Recent development of wireless communication technologies and the popularity of smart phones are making location-based services (LBS) popular.However,requesting queries to LBS servers with users' exact locations may threat the privacy of users.Therefore,there have been many researches on generating a cloaked query region for user privacy protection.Consequently,an efficient query processing algorithm for a query region is required.So,in this paper,we propose k-nearest neighbor query (k-NN) processing algorithms for a query region in road networks.To efficiently retrieve k-NN points of interest (POIs),we make use of the Island index.We also propose a method that generates an adaptive Island index to improve the query processing performance and storage usage.Finally,we show by our performance analysis that our k-NN query processing algorithms outperform the existing k-Range Nearest Neighbor (kRNN) algorithm in terms of network expansion cost and query processing time.

  9. An Efficient Query Rewriting Approach for Web Cached Data Management

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    With the internet development, querying data on the Web is an attention problem of involving information from distributed, and often dynamically, related Web sources. Basically, some sub-queries can be effectively cached from previous queries or materialized views in order to achieve a better query performance based on the notion of rewriting queries. In this paper, we propose a novel query-rewriting model, called Hierarchical Query Tree, for representing Web queries. Hierarchical Query Tree is a labeled tree that is suitable for representing the inherent hierarchy feature of data on the Web. Based on Hierarchical Query Tree, we use case-based approach to determine what the query results should be. The definitions of queries and query results are both represented as labeled trees. Thus, we can use the same model for representing cases and the medium query results can also be dynamically updated by the user queries. We show that our case-based method can be used to answer a new query based on the combination of previous queries, including changes of requirements and various information sources.

  10. Terminological collocations in medical latin and english: a comparative study.

    Science.gov (United States)

    Bieliaieva, Olena M; Lysanets, Yuliia V; Znamenska, Ivanna V; Rozhenko, Inesa V; Nikolaieva, Nataliia M

    The present paper examines the linguistic status of terminological collocations in medical Latin and English, discusses the most productive term-formation models and ways of Latin-English translation. The authors aim to provide the comparative analysis of Latin and English terminological collocations and suggest their classification in terms of the idiomaticity level and semantic valency. The research is based on the corpus of terminological collocations in Latin and English medical discourse using structural, etymological, typological, comparative methods, as well as the method of semantic analysis and conceptual metaphor theory. The research has resulted in the delineation of the following groups of terminological collocations in medical Latin and English: (1) terminological collocations with lower degree of idiomaticity - analytical units whose semantics correlates with the amount of free meanings of the components; (2) terminological collocations with semantic cohesion of the components due to metaphorical nature of the terminological element with active / passive valency; (3) clinical idioms - terminological collocations with higher degree of idiomaticity. Within the latter group, we suggest to discern eponymic, toponymic, zoomorphic, botanic and mythonimic subtypes of terminological collocations. A promising area of future research is the development of bilingual explanatory dictionaries with Latin and English equivalents of terminological collocations, as well as the information about the semantics of their components.

  11. SeqWare Query Engine: storing and searching sequence data in the cloud

    Directory of Open Access Journals (Sweden)

    Merriman Barry

    2010-12-01

    Full Text Available Abstract Background Since the introduction of next-generation DNA sequencers the rapid increase in sequencer throughput, and associated drop in costs, has resulted in more than a dozen human genomes being resequenced over the last few years. These efforts are merely a prelude for a future in which genome resequencing will be commonplace for both biomedical research and clinical applications. The dramatic increase in sequencer output strains all facets of computational infrastructure, especially databases and query interfaces. The advent of cloud computing, and a variety of powerful tools designed to process petascale datasets, provide a compelling solution to these ever increasing demands. Results In this work, we present the SeqWare Query Engine which has been created using modern cloud computing technologies and designed to support databasing information from thousands of genomes. Our backend implementation was built using the highly scalable, NoSQL HBase database from the Hadoop project. We also created a web-based frontend that provides both a programmatic and interactive query interface and integrates with widely used genome browsers and tools. Using the query engine, users can load and query variants (SNVs, indels, translocations, etc with a rich level of annotations including coverage and functional consequences. As a proof of concept we loaded several whole genome datasets including the U87MG cell line. We also used a glioblastoma multiforme tumor/normal pair to both profile performance and provide an example of using the Hadoop MapReduce framework within the query engine. This software is open source and freely available from the SeqWare project (http://seqware.sourceforge.net. Conclusions The SeqWare Query Engine provided an easy way to make the U87MG genome accessible to programmers and non-programmers alike. This enabled a faster and more open exploration of results, quicker tuning of parameters for heuristic variant calling filters

  12. SeqWare Query Engine: storing and searching sequence data in the cloud.

    Science.gov (United States)

    O'Connor, Brian D; Merriman, Barry; Nelson, Stanley F

    2010-12-21

    Since the introduction of next-generation DNA sequencers the rapid increase in sequencer throughput, and associated drop in costs, has resulted in more than a dozen human genomes being resequenced over the last few years. These efforts are merely a prelude for a future in which genome resequencing will be commonplace for both biomedical research and clinical applications. The dramatic increase in sequencer output strains all facets of computational infrastructure, especially databases and query interfaces. The advent of cloud computing, and a variety of powerful tools designed to process petascale datasets, provide a compelling solution to these ever increasing demands. In this work, we present the SeqWare Query Engine which has been created using modern cloud computing technologies and designed to support databasing information from thousands of genomes. Our backend implementation was built using the highly scalable, NoSQL HBase database from the Hadoop project. We also created a web-based frontend that provides both a programmatic and interactive query interface and integrates with widely used genome browsers and tools. Using the query engine, users can load and query variants (SNVs, indels, translocations, etc) with a rich level of annotations including coverage and functional consequences. As a proof of concept we loaded several whole genome datasets including the U87MG cell line. We also used a glioblastoma multiforme tumor/normal pair to both profile performance and provide an example of using the Hadoop MapReduce framework within the query engine. This software is open source and freely available from the SeqWare project (http://seqware.sourceforge.net). The SeqWare Query Engine provided an easy way to make the U87MG genome accessible to programmers and non-programmers alike. This enabled a faster and more open exploration of results, quicker tuning of parameters for heuristic variant calling filters, and a common data interface to simplify development of

  13. Distributed Top-k Queries in E-commerce Environment

    Institute of Scientific and Technical Information of China (English)

    JiangZhan; YiqingSong; HaixiaZhang

    2004-01-01

    This paper focus on how to make distributed top-k query in e-commerce environment through web service. We first give the query process in such environment, then we present an algorithms for processing such queries, which based on the query model we defined. Experimental results show that the algorithms is efficient.

  14. Biomedical Engineering Laboratory

    Science.gov (United States)

    2007-11-02

    The Masters of Engineering program with concentration in Biomedical Engineering at Tennessee State University was established in fall 2000. Under... biomedical engineering . The lab is fully equipped with 10 Pentium5-based, 2 Pentium4-based laptops for mobile experiments at remote locations, 8 Biopac...students (prospective graduate students in biomedical engineering ) are regularly using this lab. This summer, 8 new prospective graduate students

  15. Fast Discovering Frequent Patterns for Incremental XML Queries

    Institute of Scientific and Technical Information of China (English)

    PENG Dun-lu; QIU Yang

    2004-01-01

    It is nontrivial to maintain such discovered frequent query patterns in real XML-DBMS because the transaction database of queries may allow frequent updates and such updates may not only invalidate some existing frequent query patterns but also generate some new frequent query patterns.In this paper, two incremental updating algorithms, FUXQMiner and FUFXQMiner, are proposed for efficient maintenance of discovered frequent query patterns and generation the new frequent query patterns when new XML queries are added into the database.Experimental results from our implementation show that the proposed algorithms have good performance.

  16. Implementation of Quantum Private Queries Using Nuclear Magnetic Resonance

    Institute of Scientific and Technical Information of China (English)

    WANG Chuan; HAO Liang; ZHAO Lian-Jie

    2011-01-01

    @@ We present a modified protocol for the realization of a quantum private query process on a classical database.Using one-qubit query and CNOT operation,the query process can be realized in a two-mode database.In the query process,the data privacy is preserved as the sender would not reveal any information about the database besides her query information,and the database provider cannot retain any information about the query.We implement the quantum private query protocol in a nuclear magnetic resonance system.The density matrix of the memory registers are constructed.

  17. Compressed Data Cube for Approximate OLAP Query Processing

    Institute of Scientific and Technical Information of China (English)

    冯玉; 王珊

    2002-01-01

    Approximate query processing has emerged as an approach to dealing with thehuge data volume and complex queries in the environment of data warehouse. In this paper,we present a novel method that provides approximate answers to OLAP queries. Our methodis based on building a compressed (approximate) data cube by a clustering technique and usingthis compressed data cube to provide answers to queries directly, so it improves the performanceof the queries. We also provide the algorithm of the OLAP queries and the confidence intervalsof query results. An extensive experimental study with the OLAP council benchmark showsthe effectiveness and scalability of our cluster-based approach compared to sampling.

  18. Index and query methods in road networks

    CERN Document Server

    Feng, Jun

    2015-01-01

    This book presents the index and query techniques on road network and moving objects which are limited to road network. Here, the road network of non-Euclidean space has its unique characteristics such that two moving objects may be very close in a straight line distance. The index used in two-dimensional Euclidean space is not always appropriate for moving objects on road network. Therefore, the index structure needs to be improved in order to obtain suitable indexing methods, explore the shortest path and acquire nearest neighbor query and aggregation query methods under the new index structures. Chapter 1 of this book introduces the present situation of intelligent traffic and index in road network, Chapter 2 introduces the relevant existing spatial indexing methods. Chapter 3-5 focus on several issues of road network and query, they involves: traffic road network models (see Chapter 3), index structures (see Chapter 4) and aggregate query methods (see Chapter 5). Finally, in Chapter 6, the book briefly de...

  19. Indexing Reverse Top-k Queries

    CERN Document Server

    Chester, Sean; Venkatesh, S; Whitesides, Sue

    2012-01-01

    We consider the recently introduced monochromatic reverse top-k queries which ask for, given a new tuple q and a dataset D, all possible top-k queries on D union {q} for which q is in the result. Towards this problem, we focus on designing indexes in two dimensions for repeated (or batch) querying, a novel but practical consideration. We present the insight that by representing the dataset as an arrangement of lines, a critical k-polygon can be identified and used exclusively to respond to reverse top-k queries. We construct an index based on this observation which has guaranteed worst-case query cost that is logarithmic in the size of the k-polygon. We implement our work and compare it to related approaches, demonstrating that our index is fast in practice. Furthermore, we demonstrate through our experiments that a k-polygon is comprised of a small proportion of the original data, so our index structure consumes little disk space.

  20. EHR query language (EQL)--a query language for archetype-based health records.

    Science.gov (United States)

    Ma, Chunlan; Frankel, Heath; Beale, Thomas; Heard, Sam

    2007-01-01

    OpenEHR specifications have been developed to standardise the representation of an international electronic health record (EHR). The language used for querying EHR data is not as yet part of the specification. To fill in this gap, Ocean Informatics has developed a query language currently known as EHR Query Language (EQL), a declarative language supporting queries on EHR data. EQL is neutral to EHR systems, programming languages and system environments and depends only on the openEHR archetype model and semantics. Thus, in principle, EQL can be used in any archetype-based computational context. In the EHR context described here, particular queries mention concepts from the openEHR EHR Reference Model (RM). EQL can be used as a common query language for disparate archetype-based applications. The use of a common RM, archetypes, and a companion query language, such as EQL, semantic interoperability of EHR information is much closer. This paper introduces the EQL syntax and provides example clinical queries to illustrate the syntax. Finally, current implementations and future directions are outlined.

  1. A Preliminary Mapping of Web Queries Using Existing Image Query Schemes.

    Science.gov (United States)

    Jansen, Bernard J.

    End user searching on the Web has become the primary method of locating images for many people. This study investigates the nature of Web image queries by attempting to map them to known image classification schemes. In this study, approximately 100,000 image queries from a major Web search engine were collected in 1997, 1999, and 2001. A…

  2. SPARQL Query Re-writing Using Partonomy Based Transformation Rules

    Science.gov (United States)

    Jain, Prateek; Yeh, Peter Z.; Verma, Kunal; Henson, Cory A.; Sheth, Amit P.

    Often the information present in a spatial knowledge base is represented at a different level of granularity and abstraction than the query constraints. For querying ontology's containing spatial information, the precise relationships between spatial entities has to be specified in the basic graph pattern of SPARQL query which can result in long and complex queries. We present a novel approach to help users intuitively write SPARQL queries to query spatial data, rather than relying on knowledge of the ontology structure. Our framework re-writes queries, using transformation rules to exploit part-whole relations between geographical entities to address the mismatches between query constraints and knowledge base. Our experiments were performed on completely third party datasets and queries. Evaluations were performed on Geonames dataset using questions from National Geographic Bee serialized into SPARQL and British Administrative Geography Ontology using questions from a popular trivia website. These experiments demonstrate high precision in retrieval of results and ease in writing queries.

  3. Biomedical engineering principles

    CERN Document Server

    Ritter, Arthur B; Valdevit, Antonio; Ascione, Alfred N

    2011-01-01

    Introduction: Modeling of Physiological ProcessesCell Physiology and TransportPrinciples and Biomedical Applications of HemodynamicsA Systems Approach to PhysiologyThe Cardiovascular SystemBiomedical Signal ProcessingSignal Acquisition and ProcessingTechniques for Physiological Signal ProcessingExamples of Physiological Signal ProcessingPrinciples of BiomechanicsPractical Applications of BiomechanicsBiomaterialsPrinciples of Biomedical Capstone DesignUnmet Clinical NeedsEntrepreneurship: Reasons why Most Good Designs Never Get to MarketAn Engineering Solution in Search of a Biomedical Problem

  4. Fundamental of biomedical engineering

    CERN Document Server

    Sawhney, GS

    2007-01-01

    About the Book: A well set out textbook explains the fundamentals of biomedical engineering in the areas of biomechanics, biofluid flow, biomaterials, bioinstrumentation and use of computing in biomedical engineering. All these subjects form a basic part of an engineer''s education. The text is admirably suited to meet the needs of the students of mechanical engineering, opting for the elective of Biomedical Engineering. Coverage of bioinstrumentation, biomaterials and computing for biomedical engineers can meet the needs of the students of Electronic & Communication, Electronic & Instrumenta

  5. Managing Carious Lesions: Consensus Recommendations on Terminology.

    Science.gov (United States)

    Innes, N P T; Frencken, J E; Bjørndal, L; Maltz, M; Manton, D J; Ricketts, D; Van Landuyt, K; Banerjee, A; Campus, G; Doméjean, S; Fontana, M; Leal, S; Lo, E; Machiulskiene, V; Schulte, A; Splieth, C; Zandona, A; Schwendicke, F

    2016-05-01

    Variation in the terminology used to describe clinical management of carious lesions has contributed to a lack of clarity in the scientific literature and beyond. In this article, the International Caries Consensus Collaboration presents 1) issues around terminology, a scoping review of current words used in the literature for caries removal techniques, and 2) agreed terms and definitions, explaining how these were decided.Dental cariesis the name of the disease, and thecarious lesionis the consequence and manifestation of the disease-the signs or symptoms of the disease. The termdental caries managementshould be limited to situations involving control of the disease through preventive and noninvasive means at a patient level, whereascarious lesion managementcontrols the disease symptoms at the tooth level. While it is not possible to directly relate the visual appearance of carious lesions' clinical manifestations to the histopathology, we have based the terminology around the clinical consequences of disease (soft, leathery, firm, and hard dentine). Approaches to carious tissue removal are defined: 1)selective removal of carious tissue-includingselective removal to soft dentineandselective removal to firm dentine; 2)stepwise removal-including stage 1,selective removal to soft dentine, and stage 2,selective removal to firm dentine6 to 12 mo later; and 3)nonselective removal to hard dentine-formerly known ascomplete caries removal(technique no longer recommended). Adoption of these terms, around managing dental caries and its sequelae, will facilitate improved understanding and communication among researchers and within dental educators and the wider clinical dentistry community. © International & American Associations for Dental Research 2016.

  6. Reconciliation of ontology and terminology to cope with linguistics.

    Science.gov (United States)

    Baud, Robert H; Ceusters, Werner; Ruch, Patrick; Rassinoux, Anne-Marie; Lovis, Christian; Geissbühler, Antoine

    2007-01-01

    To discuss the relationships between ontologies, terminologies and language in the context of Natural Language Processing (NLP) applications in order to show the negative consequences of confusing them. The viewpoints of the terminologist and (computational) linguist are developed separately, and then compared, leading to the presentation of reconciliation among these points of view, with consideration of the role of the ontologist. In order to encourage appropriate usage of terminologies, guidelines are presented advocating the simultaneous publication of pragmatic vocabularies supported by terminological material based on adequate ontological analysis. Ontologies, terminologies and natural languages each have their own purpose. Ontologies support machine understanding, natural languages support human communication, and terminologies should form the bridge between them. Therefore, future terminology standards should be based on sound ontology and do justice to the diversities in natural languages. Moreover, they should support local vocabularies, in order to be easily adaptable to local needs and practices.

  7. Generating a multilingual taxonomy based on multilingual terminology clustering

    Institute of Scientific and Technical Information of China (English)

    Chengzhi; ZHANG

    2011-01-01

    Taxonomy denotes the hierarchical structure of a knowledge organization system.It has important applications in knowledge navigation,semantic annotation and semantic search.It is a useful instrument to study the multilingual taxonomy generated automatically under the dynamic information environment in which massive amounts of information are processed and found.Multilingual taxonomy is the core component of the multilingual thesaurus or ontology.This paper presents two methods of bilingual generated taxonomy:Cross-language terminology clustering and mixed-language based terminology clustering.According to our experimental results of terminology clustering related to four specific subject domains,we found that if the parallel corpus is used to cluster multilingual terminologies,the method of using mixed-language based terminology clustering outperforms that of using the cross-language terminology clustering.

  8. Risk Assessment Terminology: Risk Communication Part 2.

    Science.gov (United States)

    Liuzzo, Gaetano; Bentley, Stefano; Giacometti, Federica; Piva, Silvia; Serraino, Andrea

    2016-04-19

    The paper describes the terminology of risk communication in the view of food safety: different aspects of risk perception (perceived risk, media triggers, the psychometric paradigm, fright factors and cultural determinants of risk perception) are described. The risk profile elements are illustrated in the manuscript: hazard-food commodity combination(s) of concern; description of the public health problem; food production, processing, distribution and consumption; needs and questions for the risk assessors; available information and major knowledge gaps and other risk profile elements.

  9. Risk assessment terminology: risk communication part 2

    Directory of Open Access Journals (Sweden)

    Gaetano Liuzzo

    2016-04-01

    Full Text Available The paper describes the terminology of risk communication in the view of food safety: different aspects of risk perception (perceived risk, media triggers, the psychometric paradigm, fright factors and cultural determinants of risk perception are described. The risk profile elements are illustrated in the manuscript: hazard-food commodity combination(s of concern; description of the public health problem; food production, processing, distribution and consumption; needs and questions for the risk assessors; available information and major knowledge gaps and other risk profile elements.

  10. Semantic equivalences in Romanian medical terminology

    Directory of Open Access Journals (Sweden)

    Corina Lungu

    2014-12-01

    Full Text Available The present paper aims to underline some aspects concerning the presence of synonymy semantic relationship in specialized medical terminology, having as object of study Romanian medical terms. For this study we use a descriptive, conceptual and lexical semantic research method to provide the understanding of different couples, groups or synonymic series where medical terms have several variations: specialized/common terms, syntagms and patronyms of French or different origin. We propose a classification scheme of synonyms of medical lexicon, terms or synonymic syntagms, total and partial, in order to meet the accessibility needs in scientific communication.

  11. Transregionalism: Problems of Terminology and Conceptualization

    Directory of Open Access Journals (Sweden)

    D. A. Kuznetsov

    2016-01-01

    Full Text Available Today’s world is witnessing the remarkable development of transregional ties between distinct regions and powers within the international system evolving towards multipolarity. However, the essence of transregionalism remains understudied to the extent that there is no clear consensus for which terminology should be used to define this phenomenon. The article compares existing approaches to transregionalism conceptualization, analyzes the differences in the use of terms, and discusses the global impact of transregional relations on world politics and economy. The author advocates a term transregionalism (instead of interregionalism, crossregionalism, macroregionalization etc. and suggests its definition.

  12. jQuery for designers beginner's guide

    CERN Document Server

    MacLees, Natalie

    2014-01-01

    A step-by-step guide that spices up your web pages and designs them in the way you want using the most widely used JavaScript library, jQuery. The beginner-friendly and easy-to-understand approach of the book will help get to grips with jQuery in no time. If you know the fundamentals of HTML and CSS, and want to extend your knowledge by learning to use JavaScript, then this is just the book for you. jQuery makes JavaScript straightforward and approachable - you'll be surprised at how easy it can be to add animations and special effects to your beautifully designed pages.

  13. Extending OLAP Querying to External Object

    DEFF Research Database (Denmark)

    Pedersen, Torben Bach; Shoshani, Arie; Gu, Junmin

    inherent in data in nonstandard applications are not accommodated well by OLAP systems. In contrast, object database systems are built to handle such complexity, but do not support OLAP-type querying well. This paper presents the concepts and techniques underlying a flexible, multi-model federated system...... that enables OLAP users to exploit simultaneously the features of OLAP and object systems. The system allows data to be handled using the most appropriate data model and technology: OLAP systems for dimensional data and object database systems for more complex, general data. Additionally, physical data...... integration can be avoided. As a vehicle for demonstrating the capabilities of the system, a prototypical OLAP language is defined and extended to naturally support queries that involve data in object databases. The language permits selection criteria that reference object data, queries that return...

  14. Animating the Web with jQuery

    Directory of Open Access Journals (Sweden)

    Asokan M

    2013-02-01

    Full Text Available World globalization and present day technology increases the web users rapidly. Every website is trying to attract the web users. The web site creators /developers add different kind of animations to their websites. There are many softwares available to create animation. jQuery can be used to create interactive and powerful web pages with animations. JQuery is a JavaScript library intendedto make Java Script programming easier and more fun. A JavaScript library is a complex JavaScript program that both simplifies difficult tasks and solves cross-browser problems. With jQuery, we canaccomplish tasks in a single line of code. JQuery is used on millions of websites. This paper discuss about the advantages and usage statistics of jQuery on the web. A complete procedure to create a slider and banner plug-ins are also included. They are tested with different browsers.

  15. Optimal Planar Orthogonal Skyline Counting Queries

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Larsen, Kasper Green

    2014-01-01

    The skyline of a set of points in the plane is the subset of maximal points, where a point (x,y) is maximal if no other point (x',y') satisfies x'≥ x and y'≥ x. We consider the problem of preprocessing a set P of n points into a space efficient static data structure supporting orthogonal skyline...... counting queries, i.e. given a query rectangle R to report the size of the skyline of P\\cap R. We present a data structure for storing n points with integer coordinates having query time O(lg n/lglg n) and space usage O(n). The model of computation is a unit cost RAM with logarithmic word size. We prove...

  16. How Do Search Engines Handle Chinese Queries?

    Directory of Open Access Journals (Sweden)

    Hong Cui

    2005-10-01

    Full Text Available The use of languages other than English has been growing exponentially on the Web. However, the major search engines have been lagging behind in providing indexes and search features to handle these languages. This article explores the characteristics of the Chinese language and how queries in this language are handled by different search engines. Queries were entered in two major search engines (Google and AlltheWeb and two search engines developed for Chinese (Sohu and Baidu. Criteria such as handling word segmentation, number of retrieved documents, and correct display and identification of Chinese characters were used to examine how the search engines handled the queries. The results showed that the performance of the two major search engines was not on a par with that of the search engines developed for Chinese.

  17. Path-based Queries on Trajectory Data

    DEFF Research Database (Denmark)

    Krogh, Benjamin Bjerre; Pelekis, Nikos; Theodoridis, Yannis

    2014-01-01

    a specific path by only retrieving data from the first and last edge in the path. To correctly answer strict path queries existing network-constrained trajectory indexes must retrieve data from all edges in the path. An extensive performance study of NETTRA using a very large real-world trajectory data set....... To efficiently support strict path queries, we present a novel NETwork-constrained TRAjectory index (NETTRA). This index enables very efficient retrieval of trajectories that follow a specific path, i.e., strict path queries. NETTRA uses a new path encoding scheme that can determine if a trajectory follows......, consisting of 1.7 million trajectories (941 million GPS records) and a road network with 1.3 million edges, shows a speed-up of two orders of magnitude compared to state-of-the-art trajectory indexes....

  18. jQuery Mobile Up and Running

    CERN Document Server

    Firtman, Maximiliano

    2012-01-01

    Would you like to build one mobile web application that works on iPad and Kindle Fire as well as iPhone and Android smartphones? This introductory guide to jQuery Mobile shows you how. Through a series of hands-on exercises, you'll learn the best ways to use this framework's many interface components to build customizable, multiplatform apps. You don't need any programming skills or previous experience with jQuery to get started. By the time you finish this book, you'll know how to create responsive, Ajax-based interfaces that work on a variety of smartphones and tablets, using jQuery Mobile

  19. Query strategy for sequential ontology debugging

    CERN Document Server

    Shchekotykhina, Kostyantyn; Fleiss, Philipp; Rodler, Patrick

    2011-01-01

    Debugging of ontologies is an important prerequisite for their wide-spread application, especially in areas that rely upon everyday users to create and maintain knowledge bases, as in the case of the Semantic Web. Recent approaches use diagnosis methods to identify causes of inconsistent or incoherent ontologies. However, in most debugging scenarios these methods return many alternative diagnoses, thus placing the burden of fault localization on the user. This paper demonstrates how the target diagnosis can be identified by performing a sequence of observations, that is, by querying an oracle about entailments of the target ontology. We exploit a-priori probabilities of typical user errors to formulate information-theoretic concepts for query selection. Our evaluation showed that the proposed method significantly reduces the number of required queries compared to myopic strategies. We experimented with different probability distributions of user errors and different qualities of the a-priori probabilities. Ou...

  20. Automatic Building Information Model Query Generation

    Energy Technology Data Exchange (ETDEWEB)

    Jiang, Yufei; Yu, Nan; Ming, Jiang; Lee, Sanghoon; DeGraw, Jason; Yen, John; Messner, John I.; Wu, Dinghao

    2015-12-01

    Energy efficient building design and construction calls for extensive collaboration between different subfields of the Architecture, Engineering and Construction (AEC) community. Performing building design and construction engineering raises challenges on data integration and software interoperability. Using Building Information Modeling (BIM) data hub to host and integrate building models is a promising solution to address those challenges, which can ease building design information management. However, the partial model query mechanism of current BIM data hub collaboration model has several limitations, which prevents designers and engineers to take advantage of BIM. To address this problem, we propose a general and effective approach to generate query code based on a Model View Definition (MVD). This approach is demonstrated through a software prototype called QueryGenerator. By demonstrating a case study using multi-zone air flow analysis, we show how our approach and tool can help domain experts to use BIM to drive building design with less labour and lower overhead cost.

  1. Transfer active learning by querying committee

    Institute of Scientific and Technical Information of China (English)

    Hao SHAO; Feng TAO; Rui XU

    2014-01-01

    In real applications of inductive learning for classifi cation, labeled instances are often defi cient, and labeling them by an oracle is often expensive and time-consuming. Active learning on a single task aims to select only informative unlabeled instances for querying to improve the classifi cation accuracy while decreasing the querying cost. However, an inevitable problem in active learning is that the informative measures for selecting queries are commonly based on the initial hypotheses sampled from only a few labeled instances. In such a circumstance, the initial hypotheses are not reliable and may deviate from the true distribution underlying the target task. Consequently, the informative measures will possibly select irrelevant instances. A promising way to compensate this problem is to borrow useful knowledge from other sources with abundant labeled information, which is called transfer learning. However, a signifi cant challenge in transfer learning is how to measure the similarity between the source and the target tasks. One needs to be aware of different distributions or label assignments from unrelated source tasks;otherwise, they will lead to degenerated performance while transferring. Also, how to design an effective strategy to avoid selecting irrelevant samples to query is still an open question. To tackle these issues, we propose a hybrid algorithm for active learning with the help of transfer learning by adopting a divergence measure to alleviate the negative transfer caused by distribution differences. To avoid querying irrelevant instances, we also present an adaptive strategy which could eliminate unnecessary instances in the input space and models in the model space. Extensive experiments on both the synthetic and the real data sets show that the proposed algorithm is able to query fewer instances with a higher accuracy and that it converges faster than the state-of-the-art methods.

  2. A structural query system for Han characters

    DEFF Research Database (Denmark)

    Skala, Matthew

    2016-01-01

    The IDSgrep structural query system for Han character dictionaries is presented. This dictionary search system represents the spatial structure of Han characters using Extended Ideographic Description Sequences (EIDSes), a data model and syntax based on the Unicode IDS concept. It includes a query...... language for EIDS databases, with a freely available implementation and format translation from popular third-party IDS and XML character databases. The system is designed to suit the needs of font developers and foreign language learners. The search algorithm includes a bit vector index inspired by Bloom...

  3. Approximate Distance Oracles with Improved Query Time

    CERN Document Server

    Wulff-Nilsen, Christian

    2012-01-01

    Given an undirected graph $G$ with $m$ edges, $n$ vertices, and non-negative edge weights, and given an integer $k\\geq 2$, we show that a $(2k-1)$-approximate distance oracle for $G$ of size $O(kn^{1 + 1/k})$ and with $O(\\log k)$ query time can be constructed in $O(\\min\\{kmn^{1/k},\\sqrt km + kn^{1 + c/\\sqrt k}\\})$ time for some constant $c$. This improves the $O(k)$ query time of Thorup and Zwick. For any $0 0$ and $k = O(\\log n/\\log\\log n)$.

  4. Terminology and methodology in modelling for water quality management

    DEFF Research Database (Denmark)

    Carstensen, J.; Vanrolleghem, P.; Rauch, W.

    1997-01-01

    There is a widespread need for a common terminology in modelling for water quality management. This paper points out sources of confusion in the communication between researchers due to misuse of existing terminology or use of unclear terminology. The paper attempts to clarify the context...... of the most widely used terms for characterising models and within the process of model building. It is essential to the ever growing society of researchers within water quality management, that communication is eased by establishing a common terminology. This should not be done by giving broader definitions...

  5. Interoperable Archetypes With a Three Folded Terminology Governance.

    Science.gov (United States)

    Pederson, Rune; Ellingsen, Gunnar

    2015-01-01

    The use of openEHR archetypes increases the interoperability of clinical terminology, and in doing so improves upon the availability of clinical terminology for both primary and secondary purposes. Where clinical terminology is employed in the EPR system, research reports conflicting a results for the use of structuring and standardization as measurements of success. In order to elucidate this concept, this paper focuses on the effort to establish a national repository for openEHR based archetypes in Norway where clinical terminology could be included with benefit for interoperability three folded.

  6. Semi-automatic semantic annotation of PubMed queries: a study on quality, efficiency, satisfaction.

    Science.gov (United States)

    Névéol, Aurélie; Islamaj Doğan, Rezarta; Lu, Zhiyong

    2011-04-01

    Information processing algorithms require significant amounts of annotated data for training and testing. The availability of such data is often hindered by the complexity and high cost of production. In this paper, we investigate the benefits of a state-of-the-art tool to help with the semantic annotation of a large set of biomedical queries. Seven annotators were recruited to annotate a set of 10,000 PubMed® queries with 16 biomedical and bibliographic categories. About half of the queries were annotated from scratch, while the other half were automatically pre-annotated and manually corrected. The impact of the automatic pre-annotations was assessed on several aspects of the task: time, number of actions, annotator satisfaction, inter-annotator agreement, quality and number of the resulting annotations. The analysis of annotation results showed that the number of required hand annotations is 28.9% less when using pre-annotated results from automatic tools. As a result, the overall annotation time was substantially lower when pre-annotations were used, while inter-annotator agreement was significantly higher. In addition, there was no statistically significant difference in the semantic distribution or number of annotations produced when pre-annotations were used. The annotated query corpus is freely available to the research community. This study shows that automatic pre-annotations are found helpful by most annotators. Our experience suggests using an automatic tool to assist large-scale manual annotation projects. This helps speed-up the annotation time and improve annotation consistency while maintaining high quality of the final annotations.

  7. Nanocellulose and its Composites for Biomedical Applications.

    Science.gov (United States)

    Dumanli, Ahu Gumrah

    2017-01-01

    Cellulose is a natural linear biopolymer, which is constituted of an assembly of cellulose nanofibrils in a hierarchical order. Nanocelluloses in particular show great promise as a cost-effective advanced material for biomedical applications because of their biocompatibility, biodegradability, and low cytotoxicity. Moreover, with their chemical functionality they can be easily modified to yield useful products. While nature uses the hierarchical nanostructure of cellulose as the load-bearing constituent in plants, a significant amount of research has been directed toward the fabrication of advanced cellulosic materials with various nanostructures and functional properties. Such nanocelluloses are widely applied in medical implants, tissue engineering, drug delivery, wound healing, diagnostics, and other medical applications with real examples in this field. There are also emerging fields being developed to use nanocelluloses and their composites in more novel ways in biomedical applications such as 3D printing and magnetically responsive materials. In this mini-review, recent advances in the design and fabrication of nanocellulose-based materials and composites are presented with a special emphasis on their suitability for material requirements for biomedical applications as well as the new directions and challenges that the materials might face in the future. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  8. Harmonising Nursing Terminologies Using a Conceptual Framework.

    Science.gov (United States)

    Jansen, Kay; Kim, Tae Youn; Coenen, Amy; Saba, Virginia; Hardiker, Nicholas

    2016-01-01

    The International Classification for Nursing Practice (ICNP®) and the Clinical Care Classification (CCC) System are standardised nursing terminologies that identify discrete elements of nursing practice, including nursing diagnoses, interventions, and outcomes. While CCC uses a conceptual framework or model with 21 Care Components to classify these elements, ICNP, built on a formal Web Ontology Language (OWL) description logic foundation, uses a logical hierarchical framework that is useful for computing and maintenance of ICNP. Since the logical framework of ICNP may not always align with the needs of nursing practice, an informal framework may be a more useful organisational tool to represent nursing content. The purpose of this study was to classify ICNP nursing diagnoses using the 21 Care Components of the CCC as a conceptual framework to facilitate usability and inter-operability of nursing diagnoses in electronic health records. Findings resulted in all 521 ICNP diagnoses being assigned to one of the 21 CCC Care Components. Further research is needed to validate the resulting product of this study with practitioners and develop recommendations for improvement of both terminologies.

  9. The health terminology project glossaries` structure

    Directory of Open Access Journals (Sweden)

    Sátia Marini

    2014-04-01

    Full Text Available Current paper was motivated by a Master´s degree in Translation Studies on one of the glossaries of the Health Terminology Project (PTS of the Ministry of Health (MS inBrazil, by which the products developed by the project were analyzed. The authors would like to forward their experience earned from the development of these instruments and from the evolution of the glossary´s layout and structure. Although within the same institution, each instrument is made suitable to the specific purpose of each area and the terminology project accumulates experience by the constant improvement of previously developed glossaries (adding new terms; providing the equivalent word in other languages for terms already defined and by the establishment of new ones. The evolution of the structure of the glossaries was qualitatively analyzed; remarks on the types of cross references were made; a quantitative survey of their main features was undertaken. Finally, the importance of this type of work should be underscored either within the government, or in the academy or in private companies, for the sharing of intellectual knowledge.

  10. Knowledge and theme discovery across very large biological data sets using distributed queries: a prototype combining unstructured and structured data.

    Directory of Open Access Journals (Sweden)

    Uma S Mudunuri

    Full Text Available As the discipline of biomedical science continues to apply new technologies capable of producing unprecedented volumes of noisy and complex biological data, it has become evident that available methods for deriving meaningful information from such data are simply not keeping pace. In order to achieve useful results, researchers require methods that consolidate, store and query combinations of structured and unstructured data sets efficiently and effectively. As we move towards personalized medicine, the need to combine unstructured data, such as medical literature, with large amounts of highly structured and high-throughput data such as human variation or expression data from very large cohorts, is especially urgent. For our study, we investigated a likely biomedical query using the Hadoop framework. We ran queries using native MapReduce tools we developed as well as other open source and proprietary tools. Our results suggest that the available technologies within the Big Data domain can reduce the time and effort needed to utilize and apply distributed queries over large datasets in practical clinical applications in the life sciences domain. The methodologies and technologies discussed in this paper set the stage for a more detailed evaluation that investigates how various data structures and data models are best mapped to the proper computational framework.

  11. Knowledge and theme discovery across very large biological data sets using distributed queries: a prototype combining unstructured and structured data.

    Science.gov (United States)

    Mudunuri, Uma S; Khouja, Mohamad; Repetski, Stephen; Venkataraman, Girish; Che, Anney; Luke, Brian T; Girard, F Pascal; Stephens, Robert M

    2013-01-01

    As the discipline of biomedical science continues to apply new technologies capable of producing unprecedented volumes of noisy and complex biological data, it has become evident that available methods for deriving meaningful information from such data are simply not keeping pace. In order to achieve useful results, researchers require methods that consolidate, store and query combinations of structured and unstructured data sets efficiently and effectively. As we move towards personalized medicine, the need to combine unstructured data, such as medical literature, with large amounts of highly structured and high-throughput data such as human variation or expression data from very large cohorts, is especially urgent. For our study, we investigated a likely biomedical query using the Hadoop framework. We ran queries using native MapReduce tools we developed as well as other open source and proprietary tools. Our results suggest that the available technologies within the Big Data domain can reduce the time and effort needed to utilize and apply distributed queries over large datasets in practical clinical applications in the life sciences domain. The methodologies and technologies discussed in this paper set the stage for a more detailed evaluation that investigates how various data structures and data models are best mapped to the proper computational framework.

  12. Optimization and Evaluation of Nested Queries and Procedures

    CERN Document Server

    Guravannavar, Ravindra

    2009-01-01

    Many database applications perform complex data retrieval and update tasks. Nested queries, and queries that invoke user-defined functions, which are written using a mix of procedural and SQL constructs, are often used in such applications. A straight-forward evaluation of such queries involves repeated execution of parameterized sub-queries or blocks containing queries and procedural code. An important problem that arises while optimizing nested queries as well as queries with joins, aggregates and set operations is the problem of finding an optimal sort order from a factorial number of possible sort orders. We show that even a special case of this problem is NP-Hard, and present practical heuristics that are effective and easy to incorporate in existing query optimizers. We also consider iterative execution of queries and updates inside complex procedural blocks such as user-defined functions and stored procedures. Parameter batching is an important means of improving performance as it enables set-orientate...

  13. Hybrid Filtering in Semantic Query Processing

    Science.gov (United States)

    Jeong, Hanjo

    2011-01-01

    This dissertation presents a hybrid filtering method and a case-based reasoning framework for enhancing the effectiveness of Web search. Web search may not reflect user needs, intent, context, and preferences, because today's keyword-based search is lacking semantic information to capture the user's context and intent in posing the search query.…

  14. Beginning SQL queries from novice to professional

    CERN Document Server

    Churcher, Clare

    2016-01-01

    Anyone who does any work at all with databases needs to know something of SQL. This is a friendly and easy-to-read guide to writing queries with the all-important - in the database world - SQL language. The author writes with exceptional clarity.

  15. Anytime skyline query processing for interactive systems

    DEFF Research Database (Denmark)

    Magnani, Matteo; Assent, Ira; Mortensen, Michael L.

    In this paper we introduce the concept of anytime skyline query . The skyline database operator returns the top-1record for every possible monotone record scoring function.However, computing a skyline can be very time-consumingdepending on the size, distribution and dimensionality of the data, ma...

  16. Parallel hierarchical evaluation of transitive closure queries

    NARCIS (Netherlands)

    Houtsma, M.A.W.; Cacace, F.; Ceri, S.

    1991-01-01

    Presents a new approach to parallel computation of transitive closure queries using a semantic data fragmentation. Tuples of a large base relation denote edges in a graph, which models a transportation network. A fragmentation algorithm is proposed which produces a partitioning of the base relation

  17. Parallel evaluation of multi-join queries

    NARCIS (Netherlands)

    Wilschut, A.N.; Flokstra, Jan; Apers, Peter M.G.

    1995-01-01

    A number of execution strategies for parallel evaluation of multi-join queries have been proposed in the literature; their performance was evaluated by simulation. In this paper we give a comparative performance evaluation of four execution strategies by implementing all of them on the same parallel

  18. Query term suggestion in academic search

    NARCIS (Netherlands)

    Verberne, S.; Sappelli, M.; Kraaij, W.

    2014-01-01

    In this paper, we evaluate query term suggestion in the context of academic professional search. Our overall goal is to support scientists in their information seeking tasks. We set up an interactive search system in which terms are extracted from clicked documents and suggested to the user before e

  19. Querying Source Code with Natural Language

    CERN Document Server

    Kimmig, Markus; Mezini, Mira

    2012-01-01

    One common task of developing or maintaining software is searching the source code for information like specific method calls or write accesses to certain fields. This kind of information is required to correctly implement new features and to solve bugs. This paper presents an approach for querying source code with natural language.

  20. Exploiting cost distributions for query optimization

    NARCIS (Netherlands)

    Waas, F.; Pellenkoft, A.J.

    1998-01-01

    Large-scale query optimization is, besides its practical relevance, a hard test case for optimization techniques. Since exact methods cannot be applied due to the combinatorial explosion of the search space, heuristics and probabilistic strategies have been deployed for more than a decade. However,

  1. Enabling Incremental Query Re-Optimization

    Science.gov (United States)

    Liu, Mengmeng; Ives, Zachary G.; Loo, Boon Thau

    2017-01-01

    As declarative query processing techniques expand to the Web, data streams, network routers, and cloud platforms, there is an increasing need to re-plan execution in the presence of unanticipated performance changes. New runtime information may affect which query plan we prefer to run. Adaptive techniques require innovation both in terms of the algorithms used to estimate costs, and in terms of the search algorithm that finds the best plan. We investigate how to build a cost-based optimizer that recomputes the optimal plan incrementally given new cost information, much as a stream engine constantly updates its outputs given new data. Our implementation especially shows benefits for stream processing workloads. It lays the foundations upon which a variety of novel adaptive optimization algorithms can be built. We start by leveraging the recently proposed approach of formulating query plan enumeration as a set of recursive datalog queries; we develop a variety of novel optimization approaches to ensure effective pruning in both static and incremental cases. We further show that the lessons learned in the declarative implementation can be equally applied to more traditional optimizer implementations. PMID:28659658

  2. Cooperative Scalable Moving Continuous Query Processing

    DEFF Research Database (Denmark)

    Li, Xiaohui; Karras, Panagiotis; Jensen, Christian S.

    2012-01-01

    A range of applications call for a mobile client to continuously monitor others in close proximity. Past research on such problems has covered two extremes: It has offered totally centralized solutions, where a server takes care of all queries, and totally distributed solutions, in which there is...

  3. Using temporal bursts for query modeling

    NARCIS (Netherlands)

    Peetz, M.H.; Meij, E.; de Rijke, M.

    2014-01-01

    We present an approach to query modeling that leverages the temporal distribution of documents in an initially retrieved set of documents. In news-related document collections such distributions tend to exhibit bursts. Here, we define a burst to be a time period where unusually many documents are pu

  4. Parallel hierarchical evaluation of transitive closure queries

    NARCIS (Netherlands)

    Houtsma, M.A.W.; Houtsma, M.A.W.; Cacace, F.; Ceri, S.

    1991-01-01

    Presents a new approach to parallel computation of transitive closure queries using a semantic data fragmentation. Tuples of a large base relation denote edges in a graph, which models a transportation network. A fragmentation algorithm is proposed which produces a partitioning of the base relation

  5. Adapting Query Expansion to Search Proficiency

    NARCIS (Netherlands)

    C. Boscarino (Corrado); V. Hollink (Vera); A.P. de Vries (Arjen); B. Carterette; E. Kanoulas; P. Clough; M. Sanderson

    2012-01-01

    htmlabstractWe argue that query expansion (QE) based on the full ses- sion improves the overall search experience provided that we know how to adapt the QE weighting schema to a user's search proficiency. We propose a strategy to predict search ability from session parameters. Us- ing an

  6. Enriching a Descriptive Grammar with Treebank Queries

    NARCIS (Netherlands)

    Bouma, G.; van Koppen, J.M.|info:eu-repo/dai/nl/203188934; Landsbergen, Frank; Odijk, J.E.J.M.|info:eu-repo/dai/nl/082781710; van der Wouden, Ton; van de Camp, Matje

    2015-01-01

    The Syntax of Dutch (SoD) is a descriptive and detailed grammar of Dutch, that provides data for many issues raised in linguistic theory. We present the results of a pilot project that investigated the possibility of enriching the online version of the text with links to queries that provide

  7. Query term suggestion in academic search

    NARCIS (Netherlands)

    Verberne, S.; Sappelli, M.; Kraaij, W.

    2014-01-01

    In this paper, we evaluate query term suggestion in the context of academic professional search. Our overall goal is to support scientists in their information seeking tasks. We set up an interactive search system in which terms are extracted from clicked documents and suggested to the user before

  8. Enabling Incremental Query Re-Optimization.

    Science.gov (United States)

    Liu, Mengmeng; Ives, Zachary G; Loo, Boon Thau

    2016-01-01

    As declarative query processing techniques expand to the Web, data streams, network routers, and cloud platforms, there is an increasing need to re-plan execution in the presence of unanticipated performance changes. New runtime information may affect which query plan we prefer to run. Adaptive techniques require innovation both in terms of the algorithms used to estimate costs, and in terms of the search algorithm that finds the best plan. We investigate how to build a cost-based optimizer that recomputes the optimal plan incrementally given new cost information, much as a stream engine constantly updates its outputs given new data. Our implementation especially shows benefits for stream processing workloads. It lays the foundations upon which a variety of novel adaptive optimization algorithms can be built. We start by leveraging the recently proposed approach of formulating query plan enumeration as a set of recursive datalog queries; we develop a variety of novel optimization approaches to ensure effective pruning in both static and incremental cases. We further show that the lessons learned in the declarative implementation can be equally applied to more traditional optimizer implementations.

  9. A novel methodology for querying web images

    Science.gov (United States)

    Prabhakara, Rashmi; Lee, Ching Cheng

    2005-01-01

    Ever since the advent of Internet, there has been an immense growth in the amount of image data that is available on the World Wide Web. With such a magnitude of image availability, an efficient and effective image retrieval system is required to make use of this information. This research presents an effective image matching and indexing technique that improvises on existing integrated image retrieval methods. The proposed technique follows a two-phase approach, integrating query by topic and query by example specification methods. The first phase consists of topic-based image retrieval using an improved text information retrieval (IR) technique that makes use of the structured format of HTML documents. It consists of a focused crawler that not only provides for the user to enter the keyword for the topic-based search but also, the scope in which the user wants to find the images. The second phase uses the query by example specification to perform a low-level content-based image match for the retrieval of smaller and relatively closer results of the example image. Information related to the image feature is automatically extracted from the query image by the image processing system. A technique that is not computationally intensive based on color feature is used to perform content-based matching of images. The main goal is to develop a functional image search and indexing system and to demonstrate that better retrieval results can be achieved with this proposed hybrid search technique.

  10. Approximate Nearest Neighbor Queries among Parallel Segments

    DEFF Research Database (Denmark)

    Emiris, Ioannis Z.; Malamatos, Theocharis; Tsigaridas, Elias

    2010-01-01

    We develop a data structure for answering efficiently approximate nearest neighbor queries over a set of parallel segments in three dimensions. We connect this problem to approximate nearest neighbor searching under weight constraints and approximate nearest neighbor searching on historical data...

  11. Templates and Queries in Contextual Hypermedia

    DEFF Research Database (Denmark)

    Anderson, Kenneth Mark; Hansen, Frank Allan; Bouvin, Niels Olof

    2006-01-01

    This paper presents a new definition of context for context-aware computing based on a model that relies on dynamic queries over structured objects. This new model enables developers to flexibly specify the relationship between context and context data for their context-aware applications. We dis...

  12. Visualizing multidimensional query results using animation

    Science.gov (United States)

    Sawant, Amit P.; Healey, Christopher G.

    2008-01-01

    Effective representation of large, complex collections of information (datasets) presents a difficult challenge. Visualization is a solution that uses a visual interface to support efficient analysis and discovery within the data. Our primary goal in this paper is a technique that allows viewers to compare multiple query results representing user-selected subsets of a multidimensional dataset. We present an algorithm that visualizes multidimensional information along a space-filling spiral. Graphical glyphs that vary their position, color, and texture appearance are used to represent attribute values for the data elements in each query result. Guidelines from human perception allow us to construct glyphs that are specifically designed to support exploration, facilitate the discovery of trends and relationships both within and between data elements, and highlight exceptions. A clustering algorithm applied to a user-chosen ranking attribute bundles together similar data elements. This encapsulation is used to show relationships across different queries via animations that morph between query results. We apply our techniques to the MovieLens recommender system, to demonstrate their applicability in a real-world environment, and then conclude with a simple validation experiment to identify the strengths and limitations of our design, compared to a traditional side-by-side visualization.

  13. Using Google blogs and discussions to recommend biomedical resources: a case study.

    Science.gov (United States)

    Reed, Robyn B; Chattopadhyay, Ansuman; Iwema, Carrie L

    2013-01-01

    This case study investigated whether data gathered from discussions within the social media provide a reliable basis for a biomedical resources recommendation system. Using a search query to mine text from Google Blogs and Discussions, a ranking of biomedical resources was determined based on those most frequently mentioned. To establish quality, these results were compared with rankings by subject experts. An overall agreement between the frequency of social media discussions and subject expert recommendations was observed when identifying key bioinformatics and consumer health resources. Testing the method in more than one biomedical area implies this procedure could be employed across different subjects.

  14. KaBOB: ontology-based semantic integration of biomedical databases.

    Science.gov (United States)

    Livingston, Kevin M; Bada, Michael; Baumgartner, William A; Hunter, Lawrence E

    2015-04-23

    The ability to query many independent biological databases using a common ontology-based semantic model would facilitate deeper integration and more effective utilization of these diverse and rapidly growing resources. Despite ongoing work moving toward shared data formats and linked identifiers, significant problems persist in semantic data integration in order to establish shared identity and shared meaning across heterogeneous biomedical data sources. We present five processes for semantic data integration that, when applied collectively, solve seven key problems. These processes include making explicit the differences between biomedical concepts and database records, aggregating sets of identifiers denoting the same biomedical concepts across data sources, and using declaratively represented forward-chaining rules to take information that is variably represented in source databases and integrating it into a consistent biomedical representation. We demonstrate these processes and solutions by presenting KaBOB (the Knowledge Base Of Biomedicine), a knowledge base of semantically integrated data from 18 prominent biomedical databases using common representations grounded in Open Biomedical Ontologies. An instance of KaBOB with data about humans and seven major model organisms can be built using on the order of 500 million RDF triples. All source code for building KaBOB is available under an open-source license. KaBOB is an integrated knowledge base of biomedical data representationally based in prominent, actively maintained Open Biomedical Ontologies, thus enabling queries of the underlying data in terms of biomedical concepts (e.g., genes and gene products, interactions and processes) rather than features of source-specific data schemas or file formats. KaBOB resolves many of the issues that routinely plague biomedical researchers intending to work with data from multiple data sources and provides a platform for ongoing data integration and development and for

  15. Sales promotion effect: concepts and terminology

    Directory of Open Access Journals (Sweden)

    O.V. Yusupova

    2015-06-01

    Full Text Available Sales promotion is a significant part of firm’s marketing activity, especially in the modern state of Ukrainian economy, when prices are growing fast and consumers are becoming more sensitive to the price changes. But firms are becoming more careful about their expenses too. So now it’s exceptionally important for firms to evaluate properly effect of the sales promotion. Nowadays not only total effect of sales promotions is the subject of scientists’ and firms’ interest but factors that contribute to it. Decomposition of sales promotion effect allows us to understand which factor is responsible for sales enhancing and what to expect in future periods. World economists are already developing the issue of decomposition of sales promotion effect. Started by S. Gupta topic is being discussed for more than 20 years. Despite of that, Ukrainian scientific literature remains silent about decomposition of sales promotion effect. There are no strict terms in scientific Ukrainian language for labeling certain basic concepts that are used in articles of foreign colleges. The aim of the article. The aim of the article is to form such terminology in order to bring broad discussion of decomposition of sales promotion effect into both Ukrainian science and practice. Following terms were considered in the paper: primary demand, secondary demand, purchase incidence, purchase quantity, cross-period effect, category-expansion effect, brand switching, store switching and category switching. The results of the analysis show that strict translation into Ukrainian is not always a good choice because of several reasons. There was discovered that some terms are already used in Ukrainian literature in different meaning. For instance, term «secondary demand» is already used in Ukrainian literature for describing demand for a product that depends on demand for other product. The same problem occurs when translating term «category-expansion effect» in Ukrainian

  16. A Guide to Terminology for Rh Immunoprophylaxis.

    Science.gov (United States)

    Sandler, S Gerald; Queenan, John T

    2017-09-01

    Rh immunoprophylaxis for Rh-negative women requires an understanding of terminology used for Rh blood typing laboratory reports. The pathophysiology of Rh hemolytic disease of the fetus and newborn was elucidated by studies in rhesus monkeys. Subsequent studies revealed that the human blood group antigen responsible for Rh hemolytic disease of the newborn (D antigen) is related to, but different from, the rhesus monkey antigen. Weak expression of the D antigen on red cells, originally termed D, is currently reported by laboratories as a "serologic weak D phenotype," which can be further defined by RHD genotyping to be either a weak D type or a partial D phenotype. Weak D types 1, 2, or 3 are molecularly defined RHD weak D types, which have an adequate number of intact D antigens to be managed safely as Rh-positive. Partial D phenotypes result from mutations causing loss of one or more D epitopes. Most persons with a partial D phenotype have sufficient D antigen to type as Rh-positive. Some women with a partial D phenotype are detected as serologic weak D phenotypes by routine Rh typing. Whether they type as Rh-positive or serologic weak D phenotype, after being exposed to Rh-positive red cells by transfusion or pregnancy, women with partial D phenotype can form anti-D antibodies and, if they do, are at risk for hemolytic disease of the fetus and newborn. A pregnant woman with a laboratory report of a serologic weak D phenotype should be further tested for her RHD genotype to resolve whether her case should be managed as Rh-positive or Rh-negative. For more than five decades, the practice of Rh immunoprophylaxis has remained unchanged in terms of the dose of Rh immune globulin and timing of injections. In contrast, advances in the science of Rh blood typing have resulted in a continuously evolving terminology, obliging obstetricians to update their vocabulary to guide their practice. The following review and glossary provide guidance for current Rh terminology and

  17. Beyond teaching language: Towards terminological primacy in learners’ geometric conceptualisation

    Directory of Open Access Journals (Sweden)

    Humphrey U. Atebe

    2010-07-01

    Full Text Available This paper reports on a specific aspect of a broader geometry conceptualisation study that sought to explore and explicate learners’ knowledge of basic geometric terminology in selected Nigerian and South African high schools. It is framed by the notion that students’ acquisition of the correct terminology in school geometry is important for their success in the subject. The original study further aimed to determine the relationship that might exist between a learner’s ability in verbal geometry terminology tasks and his/her ability in visual geometry terminology tasks. A total of 144 learners (72 each from South Africa and Nigeria were selected for the study, using both the stratified and the fish‐bowl sampling techniques. A questionnaire consisting of a sixty‐item multiple‐choice objective test provided the data for the study. An overall percentage mean score of 44,17% obtained in the test indicated that learners in this study had only a limited knowledge of basic geometric terminology. The Nigerian subsample in the study had a weaker understanding of basic geometric terminology than their South African counterparts. Importantly, there were high positive correlations between participants’ ability in verbal geometry terminology tasks and their ability in visual geometry terminology tasks. These results are consistent with those of several earlier studies, and provide a reasonably firm basis for certain recommendations to be made.

  18. E-TIF: An Electronic Terminology Interchange Format.

    Science.gov (United States)

    Melby, Alan

    1995-01-01

    Emphasizes the importance of terminology in an age of machine-based translation systems. Discusses differences between lexicography and terminology. Concludes with an argument for a new system based on the Text Encoding Initiative-based notions of elements and attributes. (CFR)

  19. 9 CFR 146.24 - Terminology and classification; States.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; States. 146.24 Section 146.24 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... Special Provisions for Commercial Table-Egg Layer Flocks § 146.24 Terminology and classification;...

  20. Hydrologic and water quality terminology as applied to modeling

    Science.gov (United States)

    A survey of literature and examination in particular of terminology use in a previous special collection of modeling calibration and validation papers has been conducted to arrive at a list of consistent terminology recommended for writing about hydrologic and water quality model calibration and val...

  1. 9 CFR 146.7 - Terminology and classification; general.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; general. 146.7 Section 146.7 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... General Provisions § 146.7 Terminology and classification; general. The official classification...

  2. 18 CFR 380.2 - Definitions and terminology.

    Science.gov (United States)

    2010-04-01

    ... 18 Conservation of Power and Water Resources 1 2010-04-01 2010-04-01 false Definitions and terminology. 380.2 Section 380.2 Conservation of Power and Water Resources FEDERAL ENERGY REGULATORY... POLICY ACT § 380.2 Definitions and terminology. For purposes of this part— (a) Categorical...

  3. An international terminology for grazing lands and grazing animals

    Science.gov (United States)

    In 1991, Terminology for Grazing Lands and Grazing Animals was published with the objective of ‘developing a consensus of clear definitions of terms used in the grazing of animals.’ During the XVIII International Grassland Congress, held in Canada in 1997, a new Terminology working group was formed ...

  4. 9 CFR 145.54 - Terminology and classification; States.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; States. 145.54 Section 145.54 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... Terminology and classification; States. (a) U.S. Pullorum-Typhoid Clean State. (1) A State will be declared...

  5. 36 CFR 251.81 - Definitions and terminology.

    Science.gov (United States)

    2010-07-01

    ... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Definitions and terminology. 251.81 Section 251.81 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE... Definitions and terminology. For the purposes of this subpart, the following terms are defined: Appeal....

  6. 9 CFR 146.44 - Terminology and classification; States.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; States. 146.44 Section 146.44 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... Special Provisions for Meat-Type Turkey Slaughter Plants § 146.44 Terminology and classification;...

  7. 9 CFR 145.44 - Terminology and classification; States.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; States. 145.44 Section 145.44 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... Special Provisions for Turkey Breeding Flocks and Products § 145.44 Terminology and classification;...

  8. 42 CFR 423.308 - Definitions and terminology.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 3 2010-10-01 2010-10-01 false Definitions and terminology. 423.308 Section 423.308 Public Health CENTERS FOR MEDICARE & MEDICAID SERVICES, DEPARTMENT OF HEALTH AND HUMAN SERVICES... For Qualified Prescription Drug Coverage § 423.308 Definitions and terminology. For the purposes...

  9. 9 CFR 146.8 - Terminology and classification; slaughter plants.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; slaughter plants. 146.8 Section 146.8 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE... General Provisions § 146.8 Terminology and classification; slaughter plants. Participating...

  10. Re-evaluation of cosmic ray cutoff terminology

    Science.gov (United States)

    Cooke, D. J.; Humble, J. E.; Shea, M. A.; Smart, D. F.; Lund, N.; Rasmussen, I. L.; Byrnak, B.; Goret, P.; Petrou, N.

    1985-01-01

    The study of cosmic ray access to locations inside the geomagnetic field has evolved in a manner that has led to some misunderstanding and misapplication of the terminology originally developed to describe particle access. This paper presents what is believed to be a useful set of definitions for cosmic ray cutoff terminology for use in theoretical and experimental cosmic ray studies.

  11. 5 CFR 890.1002 - Use of terminology.

    Science.gov (United States)

    2010-01-01

    ... 5 Administrative Personnel 2 2010-01-01 2010-01-01 false Use of terminology. 890.1002 Section 890.1002 Administrative Personnel OFFICE OF PERSONNEL MANAGEMENT (CONTINUED) CIVIL SERVICE REGULATIONS... Providers General Provisions and Definitions § 890.1002 Use of terminology. Unless otherwise...

  12. Multilingual Terminology Work in Theory – and in Practice

    DEFF Research Database (Denmark)

    Erdman Thomsen, Hanne; Madsen, Bodil Nistrup; Lassen, Tine

    2016-01-01

    In theory, multilingual terminology work is done by creating concept diagrams in each of the languages and comparing them to establish equivalences between concepts in the two languages. In practice, however, various terminology management systems (TMS) are used, end these systems hardly ever...

  13. 9 CFR 300.4 - Organizational terminology; personnel.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 2 2010-01-01 2010-01-01 false Organizational terminology; personnel... INSPECTION AND CERTIFICATION AGENCY MISSION AND ORGANIZATION § 300.4 Organizational terminology; personnel.... Inspection program, inspection service, or program means the organizational unit within the Department with...

  14. Handbook of biomedical optics

    CERN Document Server

    Boas, David A

    2011-01-01

    Biomedical optics holds tremendous promise to deliver effective, safe, non- or minimally invasive diagnostics and targeted, customizable therapeutics. Handbook of Biomedical Optics provides an in-depth treatment of the field, including coverage of applications for biomedical research, diagnosis, and therapy. It introduces the theory and fundamentals of each subject, ensuring accessibility to a wide multidisciplinary readership. It also offers a view of the state of the art and discusses advantages and disadvantages of various techniques.Organized into six sections, this handbook: Contains intr

  15. Biomedical applications of polymers

    CERN Document Server

    Gebelein, C G

    1991-01-01

    The biomedical applications of polymers span an extremely wide spectrum of uses, including artificial organs, skin and soft tissue replacements, orthopaedic applications, dental applications, and controlled release of medications. No single, short review can possibly cover all these items in detail, and dozens of books andhundreds of reviews exist on biomedical polymers. Only a few relatively recent examples will be cited here;additional reviews are listed under most of the major topics in this book. We will consider each of the majorclassifications of biomedical polymers to some extent, inclu

  16. Powering biomedical devices

    CERN Document Server

    Romero, Edwar

    2013-01-01

    From exoskeletons to neural implants, biomedical devices are no less than life-changing. Compact and constant power sources are necessary to keep these devices running efficiently. Edwar Romero's Powering Biomedical Devices reviews the background, current technologies, and possible future developments of these power sources, examining not only the types of biomedical power sources available (macro, mini, MEMS, and nano), but also what they power (such as prostheses, insulin pumps, and muscular and neural stimulators), and how they work (covering batteries, biofluids, kinetic and ther

  17. Biomedical Engineering Desk Reference

    CERN Document Server

    Ratner, Buddy D; Schoen, Frederick J; Lemons, Jack E; Dyro, Joseph; Martinsen, Orjan G; Kyle, Richard; Preim, Bernhard; Bartz, Dirk; Grimnes, Sverre; Vallero, Daniel; Semmlow, John; Murray, W Bosseau; Perez, Reinaldo; Bankman, Isaac; Dunn, Stanley; Ikada, Yoshito; Moghe, Prabhas V; Constantinides, Alkis

    2009-01-01

    A one-stop Desk Reference, for Biomedical Engineers involved in the ever expanding and very fast moving area; this is a book that will not gather dust on the shelf. It brings together the essential professional reference content from leading international contributors in the biomedical engineering field. Material covers a broad range of topics including: Biomechanics and Biomaterials; Tissue Engineering; and Biosignal Processing* A hard-working desk reference providing all the essential material needed by biomedical and clinical engineers on a day-to-day basis * Fundamentals, key techniques,

  18. Dictionary of television and audiovisual terminology

    CERN Document Server

    Moshkovitz, Moshe

    2008-01-01

    "Recommended"--Booklist; "unique"--Reference Reviews; "handy"--Multimedia Information & Technology; "clear...descriptive"--Classic Images; "clear, practical definitions"--Rettig on Reference; "recommended"--E-Streams; "extensive and comprehensive"--ARBA; "a handy guide"--Communication Booknotes Quarterly. With television programming being broadcast worldwide in real time, the industry needs a common professional language. Constantly changing technology, however, has resulted in continuously changing terminology, sometimes leaving even the most knowledgeable broadcasters with a lack of understanding. In this dictionary over 1,500 terms and acronyms, both modern and classical, are presented. The definitions are designed to be straightforward and jargon-free (except where defining jargon), permitting ease of use to readers from a variety of fields. Ample cross-references are provided.

  19. Metaphor identification in a terminological dictionary

    Directory of Open Access Journals (Sweden)

    Maity Siqueira

    2009-04-01

    Full Text Available This paper aims at demonstrating that metaphor is not simply a literary device, but an integral part of everyday language. The Theory of Conceptual Metaphor suggests that our conceptual system is fundamentally metaphorical. Concepts arise from our everyday interaction with the world and semantic structure reflects the conceptual structure. Metaphor, therefore, is pervasive in everyday life, not just in language but in thought and action. Based on these assumptions, we analyzed a terminological dictionary on environmental law in order to find metaphorically used lexical items. Then, for every such item we tried to determine its most literal meaning in another context. In order to do so, we applied the method for identifying metaphor developed by the Pragglejaz Group (2007. The results confirm the pervasiveness of metaphor and indicate how polysemy is motivated. Moreover, there seems to be no clear boundaries between literal and figurative language.

  20. Measurements and Terminology of Different Measure Methods

    Institute of Scientific and Technical Information of China (English)

    FANG Fang; ZHANG Wei-yuan; ZHANG Wen-bin

    2005-01-01

    Body measuring is very important for garment sizing and pattern making. In this paper, we study the difference of the landmarks between the traditional method and 3D scanner and we also select the 19 circumference measurements,29 height and length measurements, 18 breadth and depth measurements and 3 other measurements, which are quite important in fashion body measuring, to compare the terminology of them in these two measuring method. 3D scanners seem better than the traditional method on these aspects, which are the number of measurements, speed,privacy and data accuracy, but they are limited on measuring posture. And there is no uniform standard for the scanners and the definitions of the measurements in the scanners are diversified.

  1. jQuery UI 1.10 the user interface library for jQuery

    CERN Document Server

    Libby, Alex

    2013-01-01

    This book consists of an easy-to-follow, example-based approach that leads you step-by-step through the implementation and customization of each library component.This book is for frontend designers and developers who need to learn how to use jQuery UI quickly. To get the most out of this book, you should have a good working knowledge of HTML, CSS, and JavaScript, and should ideally be comfortable using jQuery.

  2. Shamanistic and postshamanistic terminologies in Saami (Lappish

    Directory of Open Access Journals (Sweden)

    Håkan Rydving

    1987-01-01

    Full Text Available The study of the lexicon of a language, of special semantic fields, changes in the meaning of words and comparisons between the lexicon or parts of it in different dialects can provide valuable complements to other types of sources. This is nothing new, and the study of Saami cultural history is in this respect no exception. A number of papers have thus dealt with different parts of the Saami lexicon, central for the understanding of various aspects of Saami culture. The purpose of this paper is to draw attention to a problem of source criticism that faces the student of Saami shamanism and is caused by the changes of meaning which words used in the shamanistic context underwent in the period of religious change, i.e. the 17th, 18th and (to some extent 19th centuries. These changes of meaning render our possibilities of understanding the shamanistic aspects of the pre-Christian Saami religion more difficult as they make it hazardous to draw conclusions about shamanism from what we know about the use and meaning of these words in the later terminologies of magic. The sources from the 17th and 18th centuries derive almost exclusively from persons whose mission in life was to replace the Saami religious rites and conceptions with new ones. A special problem with the shamanistic terminology in Saami has to do with the negative connotations by which even the earliest sources are marked. For example, the Saami words have been translated with 'conjure', `enchantemein', 'sorcerer', 'sorcery', 'witchcraft', 'wizard' etc., a tendency that has coloured the general view of the noaidi.

  3. Automated Query Learning with Wikipedia and Genetic Programming

    CERN Document Server

    Malo, Pekka; Sinha, Ankur

    2010-01-01

    Most of the existing information retrieval systems are based on bag of words model and are not equipped with common world knowledge. Work has been done towards improving the efficiency of such systems by using intelligent algorithms to generate search queries, however, not much research has been done in the direction of incorporating human-and-society level knowledge in the queries. This paper is one of the first attempts where such information is incorporated into the search queries using Wikipedia semantics. The paper presents an essential shift from conventional token based queries to concept based queries, leading to an enhanced efficiency of information retrieval systems. To efficiently handle the automated query learning problem, we propose Wikipedia-based Evolutionary Semantics (Wiki-ES) framework where concept based queries are learnt using a co-evolving evolutionary procedure. Learning concept based queries using an intelligent evolutionary procedure yields significant improvement in performance whic...

  4. An Approach to Assist Designers With Their Queries and Designs

    DEFF Research Database (Denmark)

    Ahmed, Saeema

    2006-01-01

    Recent research investigating how engineers search for information has concluded that engineering designers acquire assistance when formulating queries. An approach to assist designers with their queries is presented. This approach forms part of a knowledge management system, where indexed docume...

  5. A Revisit of Query Expansion with Different Semantic Levels

    DEFF Research Database (Denmark)

    Zhang, Ce; Cui, Bin; Cong, Gao;

    2009-01-01

    Query expansion has received extensive attention in information retrieval community. Although semantic based query expansion appears to be promising in improving retrieval performance, previous research has shown that it cannot consistently improve retrieval performance. It is a tricky problem to...

  6. Sensors for biomedical applications

    NARCIS (Netherlands)

    Bergveld, Piet

    1986-01-01

    This paper considers the impact during the last decade of modern IC technology, microelectronics, thin- and thick-film technology, fibre optic technology, etc. on the development of sensors for biomedical applications.

  7. Biomedical signal processing

    CERN Document Server

    Akay, Metin

    1994-01-01

    Sophisticated techniques for signal processing are now available to the biomedical specialist! Written in an easy-to-read, straightforward style, Biomedical Signal Processing presents techniques to eliminate background noise, enhance signal detection, and analyze computer data, making results easy to comprehend and apply. In addition to examining techniques for electrical signal analysis, filtering, and transforms, the author supplies an extensive appendix with several computer programs that demonstrate techniques presented in the text.

  8. Statistics in biomedical research

    OpenAIRE

    González-Manteiga, Wenceslao; Cadarso-Suárez, Carmen

    2007-01-01

    The discipline of biostatistics is nowadays a fundamental scientific component of biomedical, public health and health services research. Traditional and emerging areas of application include clinical trials research, observational studies, physiology, imaging, and genomics. The present article reviews the current situation of biostatistics, considering the statistical methods traditionally used in biomedical research, as well as the ongoing development of new methods in response to the new p...

  9. Biomedical signal analysis

    CERN Document Server

    Rangayyan, Rangaraj M

    2015-01-01

    The book will help assist a reader in the development of techniques for analysis of biomedical signals and computer aided diagnoses with a pedagogical examination of basic and advanced topics accompanied by over 350 figures and illustrations. Wide range of filtering techniques presented to address various applications. 800 mathematical expressions and equations. Practical questions, problems and laboratory exercises. Includes fractals and chaos theory with biomedical applications.

  10. Efficient Management of Biomedical Ontology Versions

    Science.gov (United States)

    Kirsten, Toralf; Hartung, Michael; Groß, Anika; Rahm, Erhard

    Ontologies have become very popular in life sciences and other domains. They mostly undergo continuous changes and new ontology versions are frequently released. However, current analysis studies do not consider the ontology changes reflected in different versions but typically limit themselves to a specific ontology version which may quickly become obsolete. To allow applications easy access to different ontology versions we propose a central and uniform management of the versions of different biomedical ontologies. The proposed database approach takes concept and structural changes of succeeding ontology versions into account thereby supporting different kinds of change analysis. Furthermore, it is very space-efficient by avoiding redundant storage of ontology components which remain unchanged in different versions. We evaluate the storage requirements and query performance of the proposed approach for the Gene Ontology.

  11. QUERY RESPONSE TIME COMPARISON NOSQLDB MONGODB WITH SQLDB ORACLE

    Directory of Open Access Journals (Sweden)

    Humasak T. A. Simanjuntak

    2015-01-01

    Full Text Available Penyimpanan data saat ini terdapat dua jenis yakni relational database dan non-relational database. Kedua jenis DBMS (Database Managemnet System tersebut berbeda dalam berbagai aspek seperti per-formansi eksekusi query, scalability, reliability maupun struktur penyimpanan data. Kajian ini memiliki tujuan untuk mengetahui perbandingan performansi DBMS antara Oracle sebagai jenis relational data-base dan MongoDB sebagai jenis non-relational database dalam mengolah data terstruktur. Eksperimen dilakukan untuk mengetahui perbandingan performansi kedua DBMS tersebut untuk operasi insert, select, update dan delete dengan menggunakan query sederhana maupun kompleks pada database Northwind. Untuk mencapai tujuan eksperimen, 18 query yang terdiri dari 2 insert query, 10 select query, 2 update query dan 2 delete query dieksekusi. Query dieksekusi melalui sebuah aplikasi .Net yang dibangun sebagai perantara antara user dengan basis data. Eksperimen dilakukan pada tabel dengan atau tanpa relasi pada Oracle dan embedded atau bukan embedded dokumen pada MongoDB. Response time untuk setiap eksekusi query dibandingkan dengan menggunakan metode statistik. Eksperimen menunjukkan response time query untuk proses select, insert, dan update pada MongoDB lebih cepatdaripada Oracle. MongoDB lebih cepat 64.8 % untuk select query;MongoDB lebihcepat 72.8 % untuk insert query dan MongoDB lebih cepat 33.9 % untuk update query. Pada delete query, Oracle lebih cepat 96.8 % daripada MongoDB untuk table yang berelasi, tetapi MongoDB lebih cepat 83.8 % daripada Oracle untuk table yang tidak memiliki relasi.Untuk query kompleks dengan Map Reduce pada MongoDB lebih lambat 97.6% daripada kompleks query dengan aggregate function pada Oracle.

  12. Constructing a Relational Query Optimizer for Non-Relational Languages

    OpenAIRE

    Rittinger, Jan

    2010-01-01

    Flat, unordered table data and a declarative query language established today’s success of relational database systems. Provided with the freedom to choose the evaluation order and underlying algorithms, their complex query optimizers are geared to come up with the best execution plan for a given query. With over 30 years of development and research, relational database management systems belong to the most mature and efficient query processors (especially for substantial amounts of data). ...

  13. Query Expansion Using SNOMED-CT and Weighing Schemes

    Science.gov (United States)

    2014-11-01

    recommend using the full capacity of the different Ontology that they used such as MeSH. Martinez et al. [2] from University of Melbourne, Australia and...for the first query. Query #1 58-year-old woman with hypertension and obesity presents with exercise-related episodic chest pain radiating to the...were then included with the original query as following. Query#1.0 <Summary>58-year-old woman with hypertension and obesity presents with exercise

  14. Additive manufacturing in biomedical sciences and the need for definitions and norms.

    Science.gov (United States)

    Chhaya, Mohit P; Poh, Patrina S P; Balmayor, Elizabeth R; van Griensven, Martijn; Schantz, Jan-Thorsten; Hutmacher, Dietmar W

    2015-01-01

    The application of additive biomanufacturing represents one of the most rapidly advancing areas of biomedical science, in which engineers, scientists, and clinicians are contributing to the future of health care. The combined efforts of a large number of groups around the globe have developed a strong research thrust that has resulted in a large number of publications. Reviewing this body of literature, there is an increasing trend of research groups inventing their own definitions and terminology. This has made it difficult to find and compare the results. Therefore, to move the field constructively forward, it is a conditio sine qua non to clarify various terminologies and standards. Based on this background, this article advocates tightening the terminology and has the objective of penning out definitions that will ultimately allow the development of official industry standard terms, such as American Society for Testing and Materials and or International Organization for Standardization for technologies developed for Tissue Engineering and Regenerative Medicine.

  15. A Faceted Query Engine Applied to Archaeology

    Directory of Open Access Journals (Sweden)

    Kenneth A. Ross

    2007-04-01

    Full Text Available In this article we present the Faceted Query Engine, a system developed at Columbia University under the aegis of the inter-disciplinary project Computational Tools for Modeling, Visualizing and Analyzing Historic and Archaeological Sites. Our system is based on novel Database Systems research that has been published in Computer Science venues (Ross and Janevski, 2004 and Ross et al., 2005. The goal of this article is to introduce our system to the target user audience - the archaeology community. We demonstrate the use of the Faceted Query Engine on a previously unpublished dataset: the Thulamela (South Africa collection. This dataset is comprised of iron-age finds from the Thulamela site at the Kruger National Park. Our project is the first to systematically compile and classify this dataset. We also use a larger dataset, a collection of ancient Egyptian artifacts from the Memphis site (Giddy,1999, to demonstrate some of the features of our system.

  16. Virtual Solar Observatory Distributed Query Construction

    Science.gov (United States)

    Gurman, J. B.; Dimitoglou, G.; Bogart, R.; Davey, A.; Hill, F.; Martens, P.

    2003-01-01

    Through a prototype implementation (Tian et al., this meeting) the VSO has already demonstrated the capability of unifying geographically distributed data sources following the Web Services paradigm and utilizing mechanisms such as the Simple Object Access Protocol (SOAP). So far, four participating sites (Stanford, Montana State University, National Solar Observatory and the Solar Data Analysis Center) permit Web-accessible, time-based searches that allow browse access to a number of diverse data sets. Our latest work includes the extension of the simple, time-based queries to include numerous other searchable observation parameters. For VSO users, this extended functionality enables more refined searches. For the VSO, it is a proof of concept that more complex, distributed queries can be effectively constructed and that results from heterogeneous, remote sources can be synthesized and presented to users as a single, virtual data product.

  17. Mathematical Formula Search using Natural Language Queries

    Directory of Open Access Journals (Sweden)

    YANG, S.

    2014-11-01

    Full Text Available This paper presents how to search mathematical formulae written in MathML when given plain words as a query. Since the proposed method allows natural language queries like the traditional Information Retrieval for the mathematical formula search, users do not need to enter any complicated math symbols and to use any formula input tool. For this, formula data is converted into plain texts, and features are extracted from the converted texts. In our experiments, we achieve an outstanding performance, a MRR of 0.659. In addition, we introduce how to utilize formula classification for formula search. By using class information, we finally achieve an improved performance, a MRR of 0.690.

  18. Optical Design for Biomedical Imaging

    CERN Document Server

    Liang, Rongguang

    2010-01-01

    Designing an efficient imaging system for biomedical optics requires a solid understanding of the special requirements of the optical systems for biomedical imaging and the optical components used in the systems. However, a lack of reference books on optical design (imaging and illumination) for biomedical imaging has led to some inefficient systems. This book fills the gap between biomedical optics and optical design by addressing the fundamentals of biomedical optics and optical engineering, and biomedical imaging systems. The first half provides a brief introduction to biomedical optics and

  19. A journey to Semantic Web query federation in the life sciences.

    Science.gov (United States)

    Cheung, Kei-Hoi; Frost, H Robert; Marshall, M Scott; Prud'hommeaux, Eric; Samwald, Matthias; Zhao, Jun; Paschke, Adrian

    2009-10-01

    As interest in adopting the Semantic Web in the biomedical domain continues to grow, Semantic Web technology has been evolving and maturing. A variety of technological approaches including triplestore technologies, SPARQL endpoints, Linked Data, and Vocabulary of Interlinked Datasets have emerged in recent years. In addition to the data warehouse construction, these technological approaches can be used to support dynamic query federation. As a community effort, the BioRDF task force, within the Semantic Web for Health Care and Life Sciences Interest Group, is exploring how these emerging approaches can be utilized to execute distributed queries across different neuroscience data sources. We have created two health care and life science knowledge bases. We have explored a variety of Semantic Web approaches to describe, map, and dynamically query multiple datasets. We have demonstrated several federation approaches that integrate diverse types of information about neurons and receptors that play an important role in basic, clinical, and translational neuroscience research. Particularly, we have created a prototype receptor explorer which uses OWL mappings to provide an integrated list of receptors and executes individual queries against different SPARQL endpoints. We have also employed the AIDA Toolkit, which is directed at groups of knowledge workers who cooperatively search, annotate, interpret, and enrich large collections of heterogeneous documents from diverse locations. We have explored a tool called "FeDeRate", which enables a global SPARQL query to be decomposed into subqueries against the remote databases offering either SPARQL or SQL query interfaces. Finally, we have explored how to use the vocabulary of interlinked Datasets (voiD) to create metadata for describing datasets exposed as Linked Data URIs or SPARQL endpoints. We have demonstrated the use of a set of novel and state-of-the-art Semantic Web technologies in support of a neuroscience query

  20. Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain-Specific Terminological Resource.

    Science.gov (United States)

    Alnazzawi, Noha; Thompson, Paul; Ananiadou, Sophia

    2016-01-01

    Biomedical literature articles and narrative content from Electronic Health Records (EHRs) both constitute rich sources of disease-phenotype information. Phenotype concepts may be mentioned in text in multiple ways, using phrases with a variety of structures. This variability stems partly from the different backgrounds of the authors, but also from the different writing styles typically used in each text type. Since EHR narrative reports and literature articles contain different but complementary types of valuable information, combining details from each text type can help to uncover new disease-phenotype associations. However, the alternative ways in which the same concept may be mentioned in each source constitutes a barrier to the automatic integration of information. Accordingly, identification of the unique concepts represented by phrases in text can help to bridge the gap between text types. We describe our development of a novel method, PhenoNorm, which integrates a number of different similarity measures to allow automatic linking of phenotype concept mentions to known concepts in the UMLS Metathesaurus, a biomedical terminological resource. PhenoNorm was developed using the PhenoCHF corpus-a collection of literature articles and narratives in EHRs, annotated for phenotypic information relating to congestive heart failure (CHF). We evaluate the performance of PhenoNorm in linking CHF-related phenotype mentions to Metathesaurus concepts, using a newly enriched version of PhenoCHF, in which each phenotype mention has an expert-verified link to a concept in the UMLS Metathesaurus. We show that PhenoNorm outperforms a number of alternative methods applied to the same task. Furthermore, we demonstrate PhenoNorm's wider utility, by evaluating its ability to link mentions of various other types of medically-related information, occurring in texts covering wider subject areas, to concepts in different terminological resources. We show that PhenoNorm can maintain

  1. Recommending images of user interests from the biomedical literature

    Science.gov (United States)

    Clukey, Steven; Xu, Songhua

    2013-03-01

    Every year hundreds of thousands of biomedical images are published in journals and conferences. Consequently, finding images relevant to one's interests becomes an ever daunting task. This vast amount of literature creates a need for intelligent and easy-to-use tools that can help researchers effectively navigate through the content corpus and conveniently locate materials of their interests. Traditionally, literature search tools allow users to query content using topic keywords. However, manual query composition is often time and energy consuming. A better system would be one that can automatically deliver relevant content to a researcher without having the end user manually manifest one's search intent and interests via search queries. Such a computer-aided assistance for information access can be provided by a system that first determines a researcher's interests automatically and then recommends images relevant to the person's interests accordingly. The technology can greatly improve a researcher's ability to stay up to date in their fields of study by allowing them to efficiently browse images and documents matching their needs and interests among the vast amount of the biomedical literature. A prototype system implementation of the technology can be accessed via http://www.smartdataware.com.

  2. Exploiting Conceptual Knowledge for Querying Information Systems

    OpenAIRE

    Selke, Joachim; Balke, Wolf-Tilo

    2011-01-01

    Whereas today's information systems are well-equipped for efficient query handling, their strict mathematical foundations hamper their use for everyday tasks. In daily life, people expect information to be offered in a personalized and focused way. But currently, personalization in digital systems still only takes explicit knowledge into account and does not yet process conceptual information often naturally implied by users. We discuss how to bridge the gap between users and today's systems,...

  3. Exploiting Conceptual Knowledge for Querying Information Systems

    CERN Document Server

    Selke, Joachim

    2011-01-01

    Whereas today's information systems are well-equipped for efficient query handling, their strict mathematical foundations hamper their use for everyday tasks. In daily life, people expect information to be offered in a personalized and focused way. But currently, personalization in digital systems still only takes explicit knowledge into account and does not yet process conceptual information often naturally implied by users. We discuss how to bridge the gap between users and today's systems, building on results from cognitive psychology.

  4. Date restricted queries in web search engines

    OpenAIRE

    Lewandowski, Dirk

    2004-01-01

    Search engines usually offer a date restricted search on their advanced search pages. But determining the actual update of a web page is not without problems. We conduct a study testing date restricted queries on the search engines Google, Teoma and Yahoo!. We find that these searches fail to work properly in the examined engines. We discuss implications of this for further research and search engine development.

  5. Query Reformulation for Clinical Decision Support Search

    Science.gov (United States)

    2014-11-01

    general purpose search engines: case reports are much longer than traditional queries and present a narrative structure. Our system, initially...relevance feedback (PRF). The advantage of using such technique is that it is able to expand the case report not only by adding relevant medical terms...v.4.8. The following fields were indexed and used for document retrieval (unless otherwise stated): article title, article abstract, and article text

  6. MQ-2 A Tool for Prolog-based Model Querying

    DEFF Research Database (Denmark)

    Acretoaie, Vlad; Störrle, Harald

    2012-01-01

    MQ-2 integrates a Prolog console into the MagicDraw1 modeling environment and equips this console with features targeted specifically to the task of querying models. The vision of MQ-2 is to make Prolog-based model querying accessible to both student and expert modelers by offering powerful query...

  7. Efficient Processing of Multiple DTW Queries in Time Series Databases

    DEFF Research Database (Denmark)

    Kremer, Hardy; Günnemann, Stephan; Ivanescu, Anca-Maria

    2011-01-01

    . In many of today’s applications, however, large numbers of queries arise at any given time. Existing DTW techniques do not process multiple DTW queries simultaneously, a serious limitation which slows down overall processing. In this paper, we propose an efficient processing approach for multiple DTW...... for multiple DTW queries....

  8. Multiple Query Evaluation Based on an Enhanced Genetic Algorithm.

    Science.gov (United States)

    Tamine, Lynda; Chrisment, Claude; Boughanem, Mohand

    2003-01-01

    Explains the use of genetic algorithms to combine results from multiple query evaluations to improve relevance in information retrieval. Discusses niching techniques, relevance feedback techniques, and evolution heuristics, and compares retrieval results obtained by both genetic multiple query evaluation and classical single query evaluation…

  9. Result Diversification Based on Query-Specific Cluster Ranking

    NARCIS (Netherlands)

    J. He (Jiyin); E. Meij; M. de Rijke

    2011-01-01

    htmlabstractResult diversification is a retrieval strategy for dealing with ambiguous or multi-faceted queries by providing documents that cover as many facets of the query as possible. We propose a result diversification framework based on query-specific clustering and cluster ranking,

  10. Result diversification based on query-specific cluster ranking

    NARCIS (Netherlands)

    He, J.; Meij, E.; de Rijke, M.

    2011-01-01

    Result diversification is a retrieval strategy for dealing with ambiguous or multi-faceted queries by providing documents that cover as many facets of the query as possible. We propose a result diversification framework based on query-specific clustering and cluster ranking, in which diversification

  11. Annotating URLs with query terms: What factors predict reliable annotations?

    NARCIS (Netherlands)

    Verberne, S.; Hinne, M.; Heijden, M. van der; Kraaij, W.; D'hondt, E.; Weide, T. van der

    2009-01-01

    A number of recent studies have investigated the relation be-ween URLs and associated query terms from search engine log files. In [5], the query terms associated with the domain of a URL were used as features for a URL classification task. The idea is that query terms that lead to successful classi

  12. A NEW TOP-K CONDITIONAL XML PREFERENCE QUERIES

    Directory of Open Access Journals (Sweden)

    Shaikhah Alhazmi

    2014-09-01

    Full Text Available Preference querying technology is a very important issue in a variety of applications ranging from ecommerce to personalized search engines. Most of recent research works have been dedicated to this topic in the Artificial Intelligence and Database fields. Several formalisms allowing preference reasoning and specification have been proposed in the Artificial Intelligence domain. On the other hand, in the Database field the interest has been focused mainly in extending standard Structured Query Language (SQL and also eXtensible Markup Language (XML with preference facilities in order to provide personalized query answering. More precisely, the interest in the database context focuses on the notion of Top-k preference query and on the development of efficient methods for evaluating these queries. A Top-k preference query returns k data tuples which are the most preferred according to the user’s preferences. Of course, Top-k preference query answering is closely dependent on the particular preference model underlying the semantics of the operators responsible for selecting the best tuples. In this paper, we consider the Conditional Preference queries (CP-queries where preferences are specified by a set of rules expressed in a logical formalism. We introduce Top-k conditional preference queries (Top-k CP-queries, and the operators BestK-Match and Best-Match for evaluating these queries will be presented.

  13. A comparison of user and system query performance predictions

    NARCIS (Netherlands)

    Hauff, C.; Kelly, Diane; Azzopardi, Leif

    2010-01-01

    Query performance prediction methods are usually applied to estimate the retrieval effectiveness of queries, where the evaluation is largely system sided. However, little work has been conducted to understand query performance prediction from the user's perspective. The question we consider is,

  14. Tomograph: Highlighting query parallelism in a multi-core system

    NARCIS (Netherlands)

    Gawade, M.M.; Kersten, M.L.

    2013-01-01

    Query parallelism improves serial query execution performance by orders of magnitude. Getting optimal performance from an already parallelized query plan is however difficult due to its dependency on run time factors such as correct operator scheduling, memory pressure, disk io performance, and oper

  15. Tomograph: highlighting query parallelism in a multi-core system

    NARCIS (Netherlands)

    M. Gawade; M. Kersten

    2013-01-01

    Query parallelism improves serial query execution performance by orders of magnitude. Getting optimal performance from an already parallelized query plan is however difficult due to its dependency on run time factors such as correct operator scheduling, memory pressure, disk io performance, and oper

  16. Result diversification based on query-specific cluster ranking

    NARCIS (Netherlands)

    He, J.; Meij, E.; de Rijke, M.

    2011-01-01

    Result diversification is a retrieval strategy for dealing with ambiguous or multi-faceted queries by providing documents that cover as many facets of the query as possible. We propose a result diversification framework based on query-specific clustering and cluster ranking, in which diversification

  17. Semantic vs term-based query modification analysis

    NARCIS (Netherlands)

    V. Hollink (Vera); T. Tsikrika (Theodora); A.P. de Vries (Arjen)

    2010-01-01

    htmlabstractPrevious research has studied query modifications on a syntactic level by focusing on the addition, elimination and substitution of terms between consecutive queries that have at least one term in common. In this paper, we determine semantic relations between queries by first mapping

  18. A Relational Algebra Query Language for Programming Relational Databases

    Science.gov (United States)

    McMaster, Kirby; Sambasivam, Samuel; Anderson, Nicole

    2011-01-01

    In this paper, we describe a Relational Algebra Query Language (RAQL) and Relational Algebra Query (RAQ) software product we have developed that allows database instructors to teach relational algebra through programming. Instead of defining query operations using mathematical notation (the approach commonly taken in database textbooks), students…

  19. Discrete-query quantum algorithm for NAND trees

    CERN Document Server

    Childs, A M; Jordan, S P; Yeung, D; Childs, Andrew M.; Cleve, Richard; Jordan, Stephen P.; Yeung, David

    2007-01-01

    Recently, Farhi, Goldstone, and Gutmann gave a quantum algorithm for evaluating NAND trees that runs in time O(sqrt(N log N)) in the Hamiltonian query model. In this note, we point out that their algorithm can be converted into an algorithm using O(N^{1/2 + epsilon}) queries in the conventional quantum query model, for any fixed epsilon > 0.

  20. Predicting the Effectiveness of Queries and Retrieval Systems

    NARCIS (Netherlands)

    Hauff, C.

    2010-01-01

    In this thesis we consider users' attempts to express their information needs through queries, or search requests and try to predict whether those requests will be of high or low quality. Intuitively, a query's quality is determined by the outcome of the query, that is, whether the retrieved search

  1. Optimal Succinctness for Range Minimum Queries

    CERN Document Server

    Fischer, Johannes

    2008-01-01

    For an array A of n objects from a totally ordered universe, a range minimum query (RMQ) asks for the position of the minimum element in the sub-array A[i,j]. We focus on the setting where the array $A$ is static and known in advance, and can hence be preprocessed into a scheme in order to answer future queries faster. We make the further assumption that the input array A cannot be used at query time. Under this assumption, a natural lower bound of 2n bits for RMQ-schemes exists. We give the first truly succinct preprocessing scheme for O(1)-RMQs. Its final space consumption is 2n+o(n) bits, thus being asymptotically optimal. We also give a simple linear-time construction algorithm for this scheme that needs only n+o(n) bits of space in addition to the 2n+o(n) bits needed for the final data structure, thereby lowering the peak space consumption of previous schemes from O(n\\log n) to O(n) bits. We also improve on LCA-computation in BPS- and DFUDS-encoded trees.

  2. Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration.

    Science.gov (United States)

    Ong, Edison; Xiang, Zuoshuang; Zhao, Bin; Liu, Yue; Lin, Yu; Zheng, Jie; Mungall, Chris; Courtot, Mélanie; Ruttenberg, Alan; He, Yongqun

    2017-01-04

    Linked Data (LD) aims to achieve interconnected data by representing entities using Unified Resource Identifiers (URIs), and sharing information using Resource Description Frameworks (RDFs) and HTTP. Ontologies, which logically represent entities and relations in specific domains, are the basis of LD. Ontobee (http://www.ontobee.org/) is a linked ontology data server that stores ontology information using RDF triple store technology and supports query, visualization and linkage of ontology terms. Ontobee is also the default linked data server for publishing and browsing biomedical ontologies in the Open Biological Ontology (OBO) Foundry (http://obofoundry.org) library. Ontobee currently hosts more than 180 ontologies (including 131 OBO Foundry Library ontologies) with over four million terms. Ontobee provides a user-friendly web interface for querying and visualizing the details and hierarchy of a specific ontology term. Using the eXtensible Stylesheet Language Transformation (XSLT) technology, Ontobee is able to dereference a single ontology term URI, and then output RDF/eXtensible Markup Language (XML) for computer processing or display the HTML information on a web browser for human users. Statistics and detailed information are generated and displayed for each ontology listed in Ontobee. In addition, a SPARQL web interface is provided for custom advanced SPARQL queries of one or multiple ontologies. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  3. The Terminology of The Former Romanian Inheritance Law

    Directory of Open Access Journals (Sweden)

    Adriana SFERLE

    2012-01-01

    Full Text Available Our paper is a study of Romanian legal terminology, in particular with respect toinheritance law, before the Civil Code was adopted, in 1869. Through an analysis of documentsand legal texts dealing with inheritance issues, dating back to before the 18th century, it has beenpossible to observe that religious and popular terminology was used to designate legal concepts.Some of the terms were local, thers were borrowed from Slavic languages. It was only in the 18thcentury that proper legal terminology was introduced in Romanian, mostly of Byzantine-Greekorigin; this can be explained by the socio-historical context of the time.

  4. Spatio-temporal databases complex motion pattern queries

    CERN Document Server

    Vieira, Marcos R

    2013-01-01

    This brief presents several new query processing techniques, called complex motion pattern queries, specifically designed for very large spatio-temporal databases of moving objects. The brief begins with the definition of flexible pattern queries, which are powerful because of the integration of variables and motion patterns. This is followed by a summary of the expressive power of patterns and flexibility of pattern queries. The brief then present the Spatio-Temporal Pattern System (STPS) and density-based pattern queries. STPS databases contain millions of records with information about mobi

  5. Nearest and reverse nearest neighbor queries for moving objects

    DEFF Research Database (Denmark)

    Benetis, R.; Jensen, Christian Søndergaard; Karciauskas, G.

    2006-01-01

    With the continued proliferation of wireless communications and advances in positioning technologies, algorithms for efficiently answering queries about large populations of moving objects are gaining in interest. This paper proposes algorithms for k nearest and reverse k nearest neighbor queries...... on the current and anticipated future positions of points moving continuously in the plane. The former type of query returns k objects nearest to a query object for each time point during a time interval, while the latter returns the objects that have a specified query object as one of their k closest neighbors...

  6. Algebra-Based Optimization of XML-Extended OLAP Queries

    DEFF Research Database (Denmark)

    Yin, Xuepeng; Pedersen, Torben Bach

    is desirable. This report presents a complete foundation for such OLAP-XML federations. This includes a prototypical query engine, a simplified query semantics based on previous work, and a complete physical algebra which enables precise modeling of the execution tasks of an OLAP-XML query. Effective algebra......-based and cost-based query optimization and implementation are also proposed, as well as the execution techniques. Finally, experiments with the prototypical query engine w.r.t. federation performance, optimization effectiveness, and feasibility suggest that our approach, unlike the physical integration...

  7. Current Status of NASDA Terminology Database

    Science.gov (United States)

    Kato, Akira

    2002-01-01

    NASDA Terminology Database System provides the English and Japanese terms, abbreviations, definition and reference documents. Recent progress includes a service to provide abbreviation data from the NASDA Home Page, and publishing a revised NASDA bilingual dictionary. Our next efforts to improve the system are (1) to combine our data with the data of NASA THESAURUS, (2) to add terms from new academic and engineering fields that have begun to have relations with space activities, and (3) to revise the NASDA Definition List. To combine our data with the NASA THESAURUS database we must consider the difference between the database concepts. Further effort to select adequate terms is thus required. Terms must be added from other fields to deal with microgravity experiments, human factors and so on. Some examples of new terms to be added have been collected. To revise the NASDA terms definition list, NASA and ESA definition lists were surveyed and a general concept to revise the NASDA definition list was proposed. I expect these activities will contribute to the IAA dictionary.

  8. OPTIMIZATION OF LOCATION BASED QUERIES USING SPATIAL INDEXING

    Directory of Open Access Journals (Sweden)

    S. Geetha

    2014-04-01

    Full Text Available The recent development in the technology leads to the introduction of various mobile terminals and there is a demand that the client requires effective location based services. The valid regions expand and also query retrieval time increases which lead to poor performance of query processing. The spatial indexing techniques are one of the most effective optimization methods to improve the quality of services. In existing system NN queries and window queries are used. In that R-tree and grid indexing has been used for increasing the query efficiency. But the Grid-index technique support low memory and thus large databases cannot be handled effectively. In the proposed system we are using Ordered grid index and EVR-tree to minimize the query retrieval time and to decrease the depth of the search index. The Ordered grid index and EVR-tree to speed up the spatial query processing.

  9. A Comprehensive Trainable Error Model for Sung Music Queries

    CERN Document Server

    Birmingham, W P; 10.1613/jair.1334

    2011-01-01

    We propose a model for errors in sung queries, a variant of the hidden Markov model (HMM). This is a solution to the problem of identifying the degree of similarity between a (typically error-laden) sung query and a potential target in a database of musical works, an important problem in the field of music information retrieval. Similarity metrics are a critical component of query-by-humming (QBH) applications which search audio and multimedia databases for strong matches to oral queries. Our model comprehensively expresses the types of error or variation between target and query: cumulative and non-cumulative local errors, transposition, tempo and tempo changes, insertions, deletions and modulation. The model is not only expressive, but automatically trainable, or able to learn and generalize from query examples. We present results of simulations, designed to assess the discriminatory potential of the model, and tests with real sung queries, to demonstrate relevance to real-world applications.

  10. A Grammar Analysis Model for the Unified Multimedia Query Language

    Institute of Scientific and Technical Information of China (English)

    Zhong-Sheng Cao; Zong-Da Wu; Yuan-Zhen Wang

    2008-01-01

    The unified multimedia query language (UMQL) is a powerful general-purpose multimedia query language, and it is very suitable for multimedia information retrieval. The paper proposes a grammar analysis model to implement an effective grammatical processing for the language. It separates the grammar analysis of a UMQL query specification into two phases: syntactic analysis and semantic analysis, and then respectively uses Backus-Naur form (EBNF) and logical algebra to specify both restrictive grammar rules. As a result, the model can present error guiding information for a query specification which owns incorrect grammar. The model not only suits well the processing of UMQL queries, but also has a guiding significance for other projects concerning query processings of descriptive query languages.

  11. Improve Performance of Data Warehouse by Query Cache

    Science.gov (United States)

    Gour, Vishal; Sarangdevot, S. S.; Sharma, Anand; Choudhary, Vinod

    2010-11-01

    The primary goal of data warehouse is to free the information locked up in the operational database so that decision makers and business analyst can make queries, analysis and planning regardless of the data changes in operational database. As the number of queries is large, therefore, in certain cases there is reasonable probability that same query submitted by the one or multiple users at different times. Each time when query is executed, all the data of warehouse is analyzed to generate the result of that query. In this paper we will study how using query cache improves performance of Data Warehouse and try to find the common problems faced. These kinds of problems are faced by Data Warehouse administrators which are minimizes response time and improves the efficiency of query in data warehouse overall, particularly when data warehouse is updated at regular interval.

  12. Performance Oriented Query Processing In GEO Based Location Search Engines

    CERN Document Server

    Umamaheswari, M

    2010-01-01

    Geographic location search engines allow users to constrain and order search results in an intuitive manner by focusing a query on a particular geographic region. Geographic search technology, also called location search, has recently received significant interest from major search engine companies. Academic research in this area has focused primarily on techniques for extracting geographic knowledge from the web. In this paper, we study the problem of efficient query processing in scalable geographic search engines. Query processing is a major bottleneck in standard web search engines, and the main reason for the thousands of machines used by the major engines. Geographic search engine query processing is different in that it requires a combination of text and spatial data processing techniques. We propose several algorithms for efficient query processing in geographic search engines, integrate them into an existing web search query processor, and evaluate them on large sets of real data and query traces.

  13. Semantic biomedical resource discovery: a Natural Language Processing framework.

    Science.gov (United States)

    Sfakianaki, Pepi; Koumakis, Lefteris; Sfakianakis, Stelios; Iatraki, Galatia; Zacharioudakis, Giorgos; Graf, Norbert; Marias, Kostas; Tsiknakis, Manolis

    2015-09-30

    A plethora of publicly available biomedical resources do currently exist and are constantly increasing at a fast rate. In parallel, specialized repositories are been developed, indexing numerous clinical and biomedical tools. The main drawback of such repositories is the difficulty in locating appropriate resources for a clinical or biomedical decision task, especially for non-Information Technology expert users. In parallel, although NLP research in the clinical domain has been active since the 1960s, progress in the development of NLP applications has been slow and lags behind progress in the general NLP domain. The aim of the present study is to investigate the use of semantics for biomedical resources annotation with domain specific ontologies and exploit Natural Language Processing methods in empowering the non-Information Technology expert users to efficiently search for biomedical resources using natural language. A Natural Language Processing engine which can "translate" free text into targeted queries, automatically transforming a clinical research question into a request description that contains only terms of ontologies, has been implemented. The implementation is based on information extraction techniques for text in natural language, guided by integrated ontologies. Furthermore, knowledge from robust text mining methods has been incorporated to map descriptions into suitable domain ontologies in order to ensure that the biomedical resources descriptions are domain oriented and enhance the accuracy of services discovery. The framework is freely available as a web application at ( http://calchas.ics.forth.gr/ ). For our experiments, a range of clinical questions were established based on descriptions of clinical trials from the ClinicalTrials.gov registry as well as recommendations from clinicians. Domain experts manually identified the available tools in a tools repository which are suitable for addressing the clinical questions at hand, either

  14. A general method for sifting linguistic knowledge from structured terminologies.

    Science.gov (United States)

    Grabar, N; Zweigenbaum, P

    2000-01-01

    Morphological knowledge is useful for medical language processing, information retrieval and terminology or ontology development. We show how a large volume of morphological associations between words can be learnt from existing medical terminologies by taking advantage of the semantic relations already encoded between terms in these terminologies: synonymy, hierarchy and transversal relations. The method proposed relies on no a priori linguistic knowledge. Since it can work with different relations between terms, it can be applied to any structured terminology. Tested on SNOMED and ICD in French and English, it proves to identify fairly reliable morphological relations (precision > 90%) with a good coverage (over 88% compared to the UMLS lexical variant generation program). For English words with a stem longer than 3 characters, recall reaches 98.8% for inflection and 94.7% for derivation.

  15. Similarity-Based Recommendation of New Concepts to a Terminology.

    Science.gov (United States)

    Chandar, Praveen; Yaman, Anil; Hoxha, Julia; He, Zhe; Weng, Chunhua

    Terminologies can suffer from poor concept coverage due to delays in addition of new concepts. This study tests a similarity-based approach to recommending concepts from a text corpus to a terminology. Our approach involves extraction of candidate concepts from a given text corpus, which are represented using a set of features. The model learns the important features to characterize a concept and recommends new concepts to a terminology. Further, we propose a cost-effective evaluation methodology to estimate the effectiveness of terminology enrichment methods. To test our methodology, we use the clinical trial eligibility criteria free-text as an example text corpus to recommend concepts for SNOMED CT. We computed precision at various rank intervals to measure the performance of the methods. Results indicate that our automated algorithm is an effective method for concept recommendation.

  16. Terminology: A necessary tool for the Specialized Translator

    Directory of Open Access Journals (Sweden)

    Aura E. Navarro

    2016-03-01

    Full Text Available Language disciplines, including Terminology and Specialized Translation, have made great strides after the second half of the twentieth century. This development, related to technological growth and international communication that occurred during this period, has resulted in a considerable increase of concepts. Thus, experts have become more and more aware of the importance of naming these new concepts. Specialized translators were among the first language professionals to recognize the need of mastering the terminology of specialized fields in order to perform their duties well (Antia et coll., 2005. In this work, we study the very close relationship between Terminology and Specialized Translation. We also study the theoretical and practical knowledge of Terminology that a specialized translator should have.

  17. Similarity-Based Recommendation of New Concepts to a Terminology

    Science.gov (United States)

    Chandar, Praveen; Yaman, Anil; Hoxha, Julia; He, Zhe; Weng, Chunhua

    2015-01-01

    Terminologies can suffer from poor concept coverage due to delays in addition of new concepts. This study tests a similarity-based approach to recommending concepts from a text corpus to a terminology. Our approach involves extraction of candidate concepts from a given text corpus, which are represented using a set of features. The model learns the important features to characterize a concept and recommends new concepts to a terminology. Further, we propose a cost-effective evaluation methodology to estimate the effectiveness of terminology enrichment methods. To test our methodology, we use the clinical trial eligibility criteria free-text as an example text corpus to recommend concepts for SNOMED CT. We computed precision at various rank intervals to measure the performance of the methods. Results indicate that our automated algorithm is an effective method for concept recommendation. PMID:26958170

  18. [Terminologies or classifications. What does the future hold?].

    Science.gov (United States)

    Ingenerf, J

    2007-08-01

    Classifications like ICD-10 are always purpose-dependent reconstructions of a domain. The strong hierarchical, mutually exclusive divisions of classes are necessarily the result of a compromise, i.e. by using residual classes. Below the aggregation level of classes a machine manipulable level of concepts is needed to enable knowledge-based decision support or semantic integration of patient data. A set of concepts with their meanings and descriptions is provided by terminologies like LOINC. For large specialty areas, terminologies can be no longer realized by enumeration. Similar to human beings using language according to the "LEGO principle", i.e. decomposing in primitive building blocks (vocabulary) and rule-compliant composing to meaningful sentences (grammar), in almost the same manner complex concepts are dealt with in compositional terminologies like SNOMED CT by using logical approaches. Those terminologies enable a sophisticated machine-supported interpretation of exchanged patient data, e.g. for decision support modules in drug therapy.

  19. Query Specific Rank Fusion for Image Retrieval.

    Science.gov (United States)

    Zhang, Shaoting; Yang, Ming; Cour, Timothee; Yu, Kai; Metaxas, Dimitris N

    2015-04-01

    Recently two lines of image retrieval algorithms demonstrate excellent scalability: 1) local features indexed by a vocabulary tree, and 2) holistic features indexed by compact hashing codes. Although both of them are able to search visually similar images effectively, their retrieval precision may vary dramatically among queries. Therefore, combining these two types of methods is expected to further enhance the retrieval precision. However, the feature characteristics and the algorithmic procedures of these methods are dramatically different, which is very challenging for the feature-level fusion. This motivates us to investigate how to fuse the ordered retrieval sets, i.e., the ranks of images, given by multiple retrieval methods, to boost the retrieval precision without sacrificing their scalability. In this paper, we model retrieval ranks as graphs of candidate images and propose a graph-based query specific fusion approach, where multiple graphs are merged and reranked by conducting a link analysis on a fused graph. The retrieval quality of an individual method is measured on-the-fly by assessing the consistency of the top candidates' nearest neighborhoods. Hence, it is capable of adaptively integrating the strengths of the retrieval methods using local or holistic features for different query images. This proposed method does not need any supervision, has few parameters, and is easy to implement. Extensive and thorough experiments have been conducted on four public datasets, i.e., the UKbench, Corel-5K, Holidays and the large-scale San Francisco Landmarks datasets. Our proposed method has achieved very competitive performance, including state-of-the-art results on several data sets, e.g., the N-S score 3.83 for UKbench.

  20. Terminology matters: a critical exploration of corporate social responsibility terms

    OpenAIRE

    Baden, Denise; Harwood, I.A.

    2013-01-01

    The purpose of this paper is to highlight the importance and impact of terminology used to describe Corporate Social Responsibility (CSR). Through a review of key literature and concepts, we uncover how the economic business case has become the dominant driver behind CSR action. With reference to the literature on semiotics, connotative meaning and social marketing we explore how the terminology itself may have facilitated this co-opting of an ethical concept by economic interests. The broade...