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Sample records for quasibrittle structures based

  1. Mechanics based statistical prediction of structure size and geometry effects on safety factors for composites and other quasibrittle materials

    Directory of Open Access Journals (Sweden)

    Bažant Zdeněk P.

    2008-01-01

    Full Text Available The objective of this paper1 is a rational determination of safety factors of quasibrittle structures, taking into account their size and shape. To this end, it is necessary to establish the probability density distribution function (pdf of the structural strength. For perfectly ductile and perfectly brittle materials, the proper pdf's of the nominal strength of structure are known to be Gaussian and Weibullian, respectively, and are invariable with structure size and geometry. However, for quasibrittle materials, many of which came recently to the forefront of attention, the pdf has recently been shown to depend on structure size and geometry, varying gradually from Gaussian pdf with a remote Weibull tail at small sizes to a fully Weibull pdf at large sizes. This recent result is reviewed, and then mathematically extended in two ways: 1 to a mathematical description of structural lifetime as a function of applied (time-invariable nominal stress, and 2 to a mathematical description of the statistical parameters of the pdf of structural strength as a function of structure size and shape. Experimental verification and calibration is relegated to a subsequent journal article.

  2. Unified nano-mechanics based probabilistic theory of quasibrittle and brittle structures: I. Strength, static crack growth, lifetime and scaling

    Science.gov (United States)

    Le, Jia-Liang; Bažant, Zdeněk P.; Bazant, Martin Z.

    2011-07-01

    Engineering structures must be designed for an extremely low failure probability such as 10 -6, which is beyond the means of direct verification by histogram testing. This is not a problem for brittle or ductile materials because the type of probability distribution of structural strength is fixed and known, making it possible to predict the tail probabilities from the mean and variance. It is a problem, though, for quasibrittle materials for which the type of strength distribution transitions from Gaussian to Weibullian as the structure size increases. These are heterogeneous materials with brittle constituents, characterized by material inhomogeneities that are not negligible compared to the structure size. Examples include concrete, fiber composites, coarse-grained or toughened ceramics, rocks, sea ice, rigid foams and bone, as well as many materials used in nano- and microscale devices. This study presents a unified theory of strength and lifetime for such materials, based on activation energy controlled random jumps of the nano-crack front, and on the nano-macro multiscale transition of tail probabilities. Part I of this study deals with the case of monotonic and sustained (or creep) loading, and Part II with fatigue (or cyclic) loading. On the scale of the representative volume element of material, the probability distribution of strength has a Gaussian core onto which a remote Weibull tail is grafted at failure probability of the order of 10 -3. With increasing structure size, the Weibull tail penetrates into the Gaussian core. The probability distribution of static (creep) lifetime is related to the strength distribution by the power law for the static crack growth rate, for which a physical justification is given. The present theory yields a simple relation between the exponent of this law and the Weibull moduli for strength and lifetime. The benefit is that the lifetime distribution can be predicted from short-time tests of the mean size effect on

  3. Size effect on strength and lifetime probability distributions of quasibrittle structures

    Indian Academy of Sciences (India)

    Zdeněk P Bažant; Jia-Liang Le

    2012-02-01

    Engineering structures such as aircraft, bridges, dams, nuclear containments and ships, as well as computer circuits, chips and MEMS, should be designed for failure probability < $10^{-6}-10^{-7}$ per lifetime. The safety factors required to ensure it are still determined empirically, even though they represent much larger and much more uncertain corrections to deterministic calculations than do the typical errors of modern computer analysis of structures. The empirical approach is sufficient for perfectly brittle and perfectly ductile structures since the cumulative distribution function (cdf) of random strength is known, making it possible to extrapolate to the tail from the mean and variance. However, the empirical approach does not apply to structures consisting of quasibrittle materials, which are brittle materials with inhomogeneities that are not negligible compared to structure size. This paper presents a refined theory on the strength distribution of quasibrittle structures, which is based on the fracture mechanics of nanocracks propagating by activation energy controlled small jumps through the atomic lattice and an analytical model for the multi-scale transition of strength statistics. Based on the power law for creep crack growth rate and the cdf of material strength, the lifetime distribution of quasibrittle structures under constant load is derived. Both the strength and lifetime cdfs are shown to be sizeand geometry-dependent. The theory predicts intricate size effects on both the mean structural strength and lifetime, the latter being much stronger. The theory is shown to match the experimentally observed systematic deviations of strength and lifetime histograms of industrial ceramics from the Weibull distribution.

  4. Formulation and computational aspects of plasticity and damage models with application to quasi-brittle materials

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Z.; Schreyer, H.L. [New Mexico Engineering Research Institute, Albuquerque, NM (United States)

    1995-09-01

    The response of underground structures and transportation facilities under various external loadings and environments is critical for human safety as well as environmental protection. Since quasi-brittle materials such as concrete and rock are commonly used for underground construction, the constitutive modeling of these engineering materials, including post-limit behaviors, is one of the most important aspects in safety assessment. From experimental, theoretical, and computational points of view, this report considers the constitutive modeling of quasi-brittle materials in general and concentrates on concrete in particular. Based on the internal variable theory of thermodynamics, the general formulations of plasticity and damage models are given to simulate two distinct modes of microstructural changes, inelastic flow and degradation of material strength and stiffness, that identify the phenomenological nonlinear behaviors of quasi-brittle materials. The computational aspects of plasticity and damage models are explored with respect to their effects on structural analyses. Specific constitutive models are then developed in a systematic manner according to the degree of completeness. A comprehensive literature survey is made to provide the up-to-date information on prediction of structural failures, which can serve as a reference for future research.

  5. XFEM-Based CZM for the Simulation of 3D Multiple-Cluster Hydraulic Fracturing in Quasi-Brittle Shale Formations

    Science.gov (United States)

    Haddad, Mahdi; Sepehrnoori, Kamy

    2016-12-01

    The cohesive zone model (CZM) honors the softening effects and plastic zone at the fracture tip in a quasi-brittle rock, e.g., shale, which results in a more precise fracture geometry and pumping pressure compared to those from linear elastic fracture mechanics. Nevertheless, this model, namely the planar CZM, assumes a predefined surface on which the fractures propagate and therefore restricts the fracture propagation direction. Notably, this direction depends on the stress interactions between closely spaced fractures and can be acquired by integrating CZM as the segmental contact interaction model with a fully coupled pore pressure-displacement model based on extended finite element method (XFEM). This integrated model, called XFEM-based CZM, simulates the fracture initiation and propagation along an arbitrary, solution-dependent path. In this work, we modeled a single stage of 3D hydraulic fracturing initiating from three perforation clusters in a single-layer, quasi-brittle shale formation using planar CZM and XFEM-based CZM including slit flow and poroelasticity for fracture and matrix spaces, respectively, in Abaqus. We restricted the XFEM enrichment zones to the stimulation regions as enriching the whole domain leads to extremely high computational expenses and unrealistic fracture growths around sharp edges. Moreover, we validated our numerical technique by comparing the solution for a single fracture with KGD solution and demonstrated several precautionary measures in using XFEM in Abaqus for faster solution convergence, for instance the initial fracture length and mesh refinement. We demonstrated the significance of the injection rate and stress contrast in fracture aperture, injection pressure, and the propagation direction. Moreover, we showed the effect of the stress distribution on fracture propagation direction comparing the triple-cluster fracturing results from planar CZM with those from XFEM-based CZM. We found that the stress shadowing effect of

  6. XFEM-Based CZM for the Simulation of 3D Multiple-Stage Hydraulic Fracturing in Quasi-brittle Shale Formations

    Science.gov (United States)

    Haddad, M.; Sepehrnoori, K.

    2015-12-01

    The Cohesive Zone Model (CZM) engages the plastic zone and softening effects at the fracture tip in a quasi-brittle rock, e.g. shale, which concludes a more precise fracture geometry and pumping pressure compared to those from Linear Elastic Fracture Mechanics. Nevertheless, this model, namely planar CZM, assumes a predefined surface on which the fractures propagate and therefore, restricts the fracture propagation direction. Notably, this direction depends on the stress interactions between closely spaced fractures and can be acquired integrating CZM as the segmental contact interaction model with a fully coupled pore pressure-displacement, extended finite element model (XFEM). This later model simulates the fracture initiation and propagation along an arbitrary, solution-dependent path. In this work, we modeled double- and triple-cluster 3D hydraulic fracturing in a single-layer, quasi-brittle shale formation using planar CZM and XFEM-based CZM including slit flow and poro-elasticity for fracture and matrix spaces, respectively, in Abaqus. Our fully-coupled pore pressure-stress Geomechanics model includes leak-off as a continuum-based fluid flow component coupled with the other unknowns in the problem. Having compared the triple-cluster fracturing results from planar CZM with those from XFEM-based CZM, we found that the stress shadowing effect of multiple hydraulic fractures on each other can cause these fractures to rationally propagate out of plane; this also demonstrates the advantages of the second method compared to the first one. We investigated the effect of this arbitrary propagation direction on not only the fractures' length, aperture, and the required injection pressure, but also fractures' connection to the wellbore. Depending on the spacing and the number of clusters per stage, this connection can be gradually disrupted with time due to the near-wellbore fracture closure which may embed proppant particles on the fracture wall, or screen out the

  7. Prediction of Quasi-Brittle Fracture of Concrete and Rock Structures Using Laboratory-Sized Specimens%用试验室尺寸的试样预测混凝土及岩石结构的准脆性断裂

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A simple method is developed for predicting the fracture behaviour of structures made of quasi-brittle materials such as concrete and rock using the data from laboratory-sized specimens. The method is based on the recently-developed boundary effect concept and associated asymptotic model. It is demonstrated that the "apparent" size dependence of fracture behaviour of concrete and rock is in fact due to the influence of specimen boundaries. Various size effect phenomena that are often observed in fracture mechanics tests of concrete and rock are related to each other, and the asymptotic boundary effect model can explain all the observed "size" effect phenomena. Four types of experimental results available in the literature (including the data measured on (1) the specimens of identical size with different crack-to-size (α) ratios, (2) specimens of different sizes with different α-ratios, (3) different types of specimens and (4) geometrically similar specimens) are used to verify the asymptotic boundary effect model, and it is found that the predictions of the model agree very well with the experimental results. Furthermore, the important fracture properties, fracture toughness KIC and strength ft of quasi-brittle materials such as concrete and rock can also be calculated using the formulae provided in the model.

  8. Modelling dynamic tensile failure of quasi-brittle materials using stress-enhanced non local models

    NARCIS (Netherlands)

    Pereira, L.; Weerheijm, J.; Sluys, L.J.

    2015-01-01

    The development of realistic numerical tools to efficiently model the response of concrete structures subjected to close-in detonations and high velocity impacts has been one of the major quests in defense research. Under these loading conditions, quasi-brittle materials undergo a multitude of failu

  9. Modelling dynamic tensile failure of quasi-brittle materials using stress-enhanced nonlocal models

    NARCIS (Netherlands)

    Magalhaes Pereira, L.F.; Weerheijm, J.; Sluys, L.J.

    2015-01-01

    The development of realistic numerical tools to efficiently model the response of concrete structures subjected to close-in detonations and high velocity impacts has been one of the major quests in defense research. Under these loading conditions, quasi-brittle materials undergo a multitude of failu

  10. Generalized Continuum: from Voigt to the Modeling of Quasi-Brittle Materials

    Directory of Open Access Journals (Sweden)

    Jamile Salim Fuina

    2010-12-01

    Full Text Available This article discusses the use of the generalized continuum theories to incorporate the effects of the microstructure in the nonlinear finite element analysis of quasi-brittle materials and, thus, to solve mesh dependency problems. A description of the problem called numerically induced strain localization, often found in Finite Element Method material non-linear analysis, is presented. A brief historic about the Generalized Continuum Mechanics based models is presented, since the initial work of Voigt (1887 until the more recent studies. By analyzing these models, it is observed that the Cosserat and microstretch approaches are particular cases of a general formulation that describes the micromorphic continuum. After reporting attempts to incorporate the material microstructure in Classical Continuum Mechanics based models, the article shows the recent tendency of doing it according to assumptions of the Generalized Continuum Mechanics. Finally, it presents numerical results which enable to characterize this tendency as a promising way to solve the problem.

  11. Failure processes in soft and quasi-brittle materials with nonhomogeneous microstructures

    Science.gov (United States)

    Spring, Daniel W.

    Material failure pervades the fields of materials science and engineering; it occurs at various scales and in various contexts. Understanding the mechanisms by which a material fails can lead to advancements in the way we design and build the world around us. For example, in structural engineering, understanding the fracture of concrete and steel can lead to improved structural systems and safer designs; in geological engineering, understanding the fracture of rock can lead to increased efficiency in oil and gas extraction; and in biological engineering, understanding the fracture of bone can lead to improvements in the design of bio-composites and medical implants. In this thesis, we numerically investigate a wide spectrum of failure behavior; in soft and quasi-brittle materials with nonhomogeneous microstructures considering a statistical distribution of material properties. The first topic we investigate considers the influence of interfacial interactions on the macroscopic constitutive response of particle reinforced elastomers. When a particle is embedded into an elastomer, the polymer chains in the elastomer tend to adsorb (or anchor) onto the surface of the particle; creating a region in the vicinity of each particle (often referred to as an interphase) with distinct properties from those in the bulk elastomer. This interphasial region has been known to exist for many decades, but is primarily omitted in computational investigations of such composites. In this thesis, we present an investigation into the influence of interphases on the macroscopic constitutive response of particle filled elastomers undergoing large deformations. In addition, at large deformations, a localized region of failure tends to accumulate around inclusions. To capture this localized region of failure (often referred to as interfacial debonding), we use cohesive zone elements which follow the Park-Paulino-Roesler traction-separation relation. To account for friction, we present a new

  12. Micromechanics of rock damage: Advances in the quasi-brittle field

    Directory of Open Access Journals (Sweden)

    Qizhi Zhu

    2017-02-01

    Full Text Available Constitutive models play an essential role in numerical modeling and simulation of nonlinear deformation, progressive damage and failure of rock-like materials and structures. Recent advances in the quasi-brittle field show that upscaling methods by homogenization have provided a new efficient way to derive macroscopic formulations of rocks from their microstructure information and local properties and then to model nonlinear mechanical behaviors identified at laboratory. This paper aims first at relating the mechanical phenomena on sample scale to their respective mechanisms on microscale. Main focus is put on unilateral effects due to crack's opening/closure transition, material anisotropy induced by crack growth in some preferred directions and multiphysical coupling at microcracks. After a brief introduction to the linear homogenization method and its application to crack problems, we present some recent advances achieved in the combined homogenization/thermodynamics framework, including anisotropic unilateral damage-friction coupling, theoretical failure prediction in conjunction with deformation analyses, poromechanical coupling, analytical solutions and numerical implementation with application to typical brittle rocks.

  13. Unified analytical stress- strain curve for quasibrittle geomaterial in uniaxial tension, direct shear and uniaxial compression

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Considering strain localization in the form of a narrow band initiated just at peak stress, three analytical expressions for stress- strain curves of quasibrittle geomaterial (such as rock and concrete) in uniaxial tension, direct shear and uniaxial compression were presented, respectively. The three derived stress- strain curves were generalized as a unified formula. Beyond the onset of strain localization, a linear strain-softening constitutive relation for localized band was assigned. The size of the band was controlled by internal or characteristic length according to gradient-dependent plasticity. Elastic strain within the entire specimen was assumed to be uniform and decreased with the increase of plastic strain in localized band. Total strain of the specimen was decomposed into elastic and plastic parts. Plastic strain of the specimen was the average value of plastic strains in localized band over the entire specimen. For different heights, the predicted softening branches of the relative stress - strain curves in uniaxial compression are consistent with the previously experimental results for normal concrete specimens. The present expressions for the post-peak stress - deformation curves in uniaxial tension and direct shear agree with the previously numerical results based on gradient-dependent plasticity.

  14. Two-dimensional isotropic damage elastoplastic model for quasi-brittle material

    OpenAIRE

    Beneš, P. (Pavel); Vavřík, D. (Daniel)

    2014-01-01

    Micro-mechanical model for isotropic damage of quasi-brittle material including frictionis presented. Damage is assumed to be isotropic and scalar damage variable is employed . Operatorsplitting method is applied. The article contains derived expressions for derivations necessary forcomputation of coefficients in two dimensions for strain and damage normality rules.

  15. Quasi-Brittle Fracture Modeling of Preflawed Bitumen Using a Diffuse Interface Model

    Directory of Open Access Journals (Sweden)

    Yue Hou

    2016-01-01

    Full Text Available Fundamental understandings on the bitumen fracture mechanism are vital to improve the mixture design of asphalt concrete. In this paper, a diffuse interface model, namely, phase-field method is used for modeling the quasi-brittle fracture in bitumen. This method describes the microstructure using a phase-field variable which assumes one in the intact solid and negative one in the crack region. Only the elastic energy will directly contribute to cracking. To account for the growth of cracks, a nonconserved Allen-Cahn equation is adopted to evolve the phase-field variable. Numerical simulations of fracture are performed in bituminous materials with the consideration of quasi-brittle properties. It is found that the simulation results agree well with classic fracture mechanics.

  16. Finite element modeling of quasi-brittle cracks in 2D and 3D with enhanced strain accuracy

    Science.gov (United States)

    Cervera, M.; Barbat, G. B.; Chiumenti, M.

    2017-07-01

    This paper discusses the finite element modeling of cracking in quasi-brittle materials. The problem is addressed via a mixed strain/displacement finite element formulation and an isotropic damage constitutive model. The proposed mixed formulation is fully general and is applied in 2D and 3D. Also, it is independent of the specific finite element discretization considered; it can be equally used with triangles/tetrahedra, quadrilaterals/hexahedra and prisms. The feasibility and accuracy of the method is assessed through extensive comparison with experimental evidence. The correlation with the experimental tests shows the capacity of the mixed formulation to reproduce the experimental crack path and the force-displacement curves with remarkable accuracy. Both 2D and 3D examples produce results consistent with the documented data. Aspects related to the discrete solution, such as convergence regarding mesh resolution and mesh bias, as well as other related to the physical model, like structural size effect and the influence of Poisson's ratio, are also investigated. The enhanced accuracy of the computed strain field leads to accurate results in terms of crack paths, failure mechanisms and force displacement curves. Spurious mesh dependency suffered by both continuous and discontinuous irreducible formulations is avoided by the mixed FE, without the need of auxiliary tracking techniques or other computational schemes that alter the continuum mechanical problem.

  17. A unified phase-field theory for the mechanics of damage and quasi-brittle failure

    Science.gov (United States)

    Wu, Jian-Ying

    2017-06-01

    Being one of the most promising candidates for the modeling of localized failure in solids, so far the phase-field method has been applied only to brittle fracture with very few exceptions. In this work, a unified phase-field theory for the mechanics of damage and quasi-brittle failure is proposed within the framework of thermodynamics. Specifically, the crack phase-field and its gradient are introduced to regularize the sharp crack topology in a purely geometric context. The energy dissipation functional due to crack evolution and the stored energy functional of the bulk are characterized by a crack geometric function of polynomial type and an energetic degradation function of rational type, respectively. Standard arguments of thermodynamics then yield the macroscopic balance equation coupled with an extra evolution law of gradient type for the crack phase-field, governed by the aforesaid constitutive functions. The classical phase-field models for brittle fracture are recovered as particular examples. More importantly, the constitutive functions optimal for quasi-brittle failure are determined such that the proposed phase-field theory converges to a cohesive zone model for a vanishing length scale. Those general softening laws frequently adopted for quasi-brittle failure, e.g., linear, exponential, hyperbolic and Cornelissen et al. (1986) ones, etc., can be reproduced or fit with high precision. Except for the internal length scale, all the other model parameters can be determined from standard material properties (i.e., Young's modulus, failure strength, fracture energy and the target softening law). Some representative numerical examples are presented for the validation. It is found that both the internal length scale and the mesh size have little influences on the overall global responses, so long as the former can be well resolved by sufficiently fine mesh. In particular, for the benchmark tests of concrete the numerical results of load versus displacement

  18. Tensile failure of two-dimensional quasi-brittle foams

    NARCIS (Netherlands)

    Mangipudi, K. R.; Onck, P. R.

    2012-01-01

    Stress redistribution caused by damage onset and the subsequent local softening plays an important role in determining the ultimate tensile strength of a cellular structure. The formation of damage process zones with struts dissipating a finite amount of fracture energy will require the macroscopic

  19. Cohesive stresses and size effect in quasi-brittle materials

    Indian Academy of Sciences (India)

    V E Saouma; D Natekar

    2002-08-01

    A novel approach to the derivation of Ba$\\breve{z}$ant’s size effect law is presented. Contrarily to the original Lagrangian derivation which hinged on energetic consideration, a Newtonian approach based on local stress intensity factors is presented. Through this approach, it is shown that Ba$\\breve{z}$ant’s size effect law is the first (and dominant) term in a series expansion for the nominal stress. Furthermore, analytical expressions for are derived for selected specimen geometries.

  20. A dimensional analysis approach to fatigue in quasi-brittle materials

    Directory of Open Access Journals (Sweden)

    Marco Paggi

    2009-10-01

    Full Text Available In this study, a generalized Barenblatt and Botvina dimensional analysis approach to fatigue crack growth is proposed in order to highlight and explain the deviations from the classical power-law equations used to characterize the fatigue behaviour of quasi-brittle materials. According to this theoretical approach, the microstructural-size (related to the volumetric content of fibres in fibre-reinforced concrete, the crack-size, and the size-scale effects on the Paris’ law and the Wöhler equation are presented within a unified mathematical framework. Relevant experimental results taken from the literature are used to confirm the theoretical trends and to determine the values of the incomplete self-similarity exponents. All these information are expected to be useful for the design of experiments, since the role of the different dimensionless numbers governing the phenomenon of fatigue is herein elucidated.

  1. Volume Change of Heterogeneous Quasi-brittle Materials in Uniaxial Compression

    Institute of Scientific and Technical Information of China (English)

    WANG Xuebin

    2006-01-01

    The volumetric strain was categorized into elastic and plastic parts. The former composed of axial and lateral strains is uniform and determined by Hooke's law; however, the latter consisting of axial and lateral strains is a function of thickness of shear band determined by gradient-dependent plasticity by considering the heterogeneity of quasi-brittle materials. The non-uniform lateral strain due to the fact that shear band was formed in the middle of specimen was averaged within specimen to precisely assess the volumetric strain. Then, the analytical expression for volumetric strain was verified by comparison with two earlier experimental results for concrete and rock. Finally, a detailed parametric study was carried out to investigate effects of constitutive parameters (shear band thickness, elastic and softening moduli) and geometrical size of specimen(height and width of specimen) on the volume dilatancy.

  2. Structural and Material Instability

    DEFF Research Database (Denmark)

    Cifuentes, Gustavo Cifuentes

    This work is a small contribution to the general problem of structural and material instability. In this work, the main subject is the analysis of cracking and failure of structural elements made from quasi-brittle materials like concrete. The analysis is made using the finite element method. Three...... use of interface elements) is used successfully to model cases where the path of the discontinuity is known in advance, as is the case of the analysis of pull-out of fibers embedded in a concrete matrix. This method is applied to the case of non-straight fibers and fibers with forces that have....... Numerical problems associated with the use of elements with embedded cracks based on the extended finite element method are presented in the next part of this work. And an alternative procedure is used in order to successfully remove these numerical problems. In the final part of this work, a computer...

  3. Mesoscale analysis of failure in quasi-brittle materials: comparison between lattice model and acoustic emission data.

    Science.gov (United States)

    Grégoire, David; Verdon, Laura; Lefort, Vincent; Grassl, Peter; Saliba, Jacqueline; Regoin, Jean-Pierre; Loukili, Ahmed; Pijaudier-Cabot, Gilles

    2015-10-25

    The purpose of this paper is to analyse the development and the evolution of the fracture process zone during fracture and damage in quasi-brittle materials. A model taking into account the material details at the mesoscale is used to describe the failure process at the scale of the heterogeneities. This model is used to compute histograms of the relative distances between damaged points. These numerical results are compared with experimental data, where the damage evolution is monitored using acoustic emissions. Histograms of the relative distances between damage events in the numerical calculations and acoustic events in the experiments exhibit good agreement. It is shown that the mesoscale model provides relevant information from the point of view of both global responses and the local failure process. © 2015 The Authors. International Journal for Numerical and Analytical Methods in Geomechanics published by John Wiley & Sons Ltd.

  4. Coupled hydro-thermo-mechanical modeling of hydraulic fracturing in quasi-brittle rocks using BPM-DEM

    Directory of Open Access Journals (Sweden)

    Ingrid Tomac

    2017-02-01

    Full Text Available This paper presents an improved understanding of coupled hydro-thermo-mechanical (HTM hydraulic fracturing of quasi-brittle rock using the bonded particle model (BPM within the discrete element method (DEM. BPM has been recently extended by the authors to account for coupled convective–conductive heat flow and transport, and to enable full hydro-thermal fluid–solid coupled modeling. The application of the work is on enhanced geothermal systems (EGSs, and hydraulic fracturing of hot dry rock (HDR is studied in terms of the impact of temperature difference between rock and a flowing fracturing fluid. Micro-mechanical investigation of temperature and fracturing fluid effects on hydraulic fracturing damage in rocks is presented. It was found that fracture is shorter with pronounced secondary microcracking along the main fracture for the case when the convective–conductive thermal heat exchange is considered. First, the convection heat exchange during low-viscosity fluid infiltration in permeable rock around the wellbore causes significant rock cooling, where a finger-like fluid infiltration was observed. Second, fluid infiltration inhibits pressure rise during pumping and delays fracture initiation and propagation. Additionally, thermal damage occurs in the whole area around the wellbore due to rock cooling and cold fluid infiltration. The size of a damaged area around the wellbore increases with decreasing fluid dynamic viscosity. Fluid and rock compressibility ratio was found to have significant effect on the fracture propagation velocity.

  5. Structural Analysis of Plate Based Tensegrity Structures

    DEFF Research Database (Denmark)

    Hald, Frederik; Kirkegaard, Poul Henning; Damkilde, Lars

    2013-01-01

    Plate tensegrity structures combine tension cables with a cross laminated timber plate and can then form e.g. a roof structure. The topology of plate tensegrity structures is investigated through a parametric investigation. Plate tensegrity structures are investigated, and a method...... for determination of the structures pre-stresses is used. A parametric investigation is performed to determine a more optimized form of the plate based tensegrity structure. Conclusions of the use of plate based tensegrity in civil engineering and further research areas are discussed....

  6. Structural Analysis of Plate Based Tensegrity Structures

    DEFF Research Database (Denmark)

    Hald, Frederik; Kirkegaard, Poul Henning; Damkilde, Lars

    2013-01-01

    Plate tensegrity structures combine tension cables with a cross laminated timber plate and can then form e.g. a roof structure. The topology of plate tensegrity structures is investigated through a parametric investigation. Plate tensegrity structures are investigated, and a method...... for determination of the structures pre-stresses is used. A parametric investigation is performed to determine a more optimized form of the plate based tensegrity structure. Conclusions of the use of plate based tensegrity in civil engineering and further research areas are discussed....

  7. Discrete fracture in quasi-brittle materials under compressive and tensile stress states

    CSIR Research Space (South Africa)

    Klerck, PA

    2004-01-01

    Full Text Available A method for modelling discrete fracture in geomaterials under tensile and compressive stress fields has been developed based on a Mohr-Coulomb failure surface in compression and three independent anisotropic rotating crack models in tension...

  8. Molecular dynamics simulations of quasi-brittle crack development in iron

    Energy Technology Data Exchange (ETDEWEB)

    Borodin, V.A., E-mail: borodin@dni.polin.kiae.su [Karlsruhe Institute of Technology (KIT), 76131 Karlsruhe (Germany); NRC Kurchatov Institute, Kurchatov Sq. 1, 123182 Moscow (Russian Federation); Vladimirov, P.V., E-mail: Pavel.Vladimirov@kit.edu [Karlsruhe Institute of Technology (KIT), 76131 Karlsruhe (Germany)

    2011-08-31

    The paper presents the results of molecular dynamics (MD) simulations of three-dimensional kinetics of micro-crack propagation in alpha-iron and the accompanying lattice transformations at the crack tips. We show that crack initiation on {l_brace}0 0 1{r_brace} planes in iron is preceded with the emission of compact slip bands from the pre-crack tips, in agreement with the predictions of the earlier quasi-two-dimensional simulations. The application of Voronoi decomposition technique for atomic short-range order processing has allowed us to clarify the kinetics of structural transformations at the tips of nucleating and propagating cracks for three most common systems of crack propagation in iron. It is demonstrated that the compact slip bands emanating from the crack tips not only accompany crack nucleation, but remain an essential feature of the crack propagation on {l_brace}0 0 1{r_brace} planes. Due to the strong coupling between the crack tip and slip band propagation, the crack propagation can be limited by slip band interaction with microstructural obstacles, abundantly created in ferritic-martensitic steels in radiation environment of nuclear facilities.

  9. Reliability based structural design

    NARCIS (Netherlands)

    Vrouwenvelder, A.C.W.M.

    2014-01-01

    According to ISO 2394, structures shall be designed, constructed and maintained in such a way that they are suited for their use during the design working life in an economic way. To fulfil this requirement one needs insight into the risk and reliability under expected and non-expected actions. A ke

  10. Reliability based structural design

    NARCIS (Netherlands)

    Vrouwenvelder, A.C.W.M.

    2013-01-01

    According to ISO 2394, structures shall be designed, constructed and maintained in such a way that they are suited for their use during the design working life in an economic way. To fulfil this requirement one needs insight into the risk and reliability under expected and non-expected actions. A ke

  11. Plasma-based accelerator structures

    Energy Technology Data Exchange (ETDEWEB)

    Schroeder, Carl B. [Univ. of California, Berkeley, CA (United States)

    1999-12-01

    Plasma-based accelerators have the ability to sustain extremely large accelerating gradients, with possible high-energy physics applications. This dissertation further develops the theory of plasma-based accelerators by addressing three topics: the performance of a hollow plasma channel as an accelerating structure, the generation of ultrashort electron bunches, and the propagation of laser pulses is underdense plasmas.

  12. Reliability Based Ship Structural Design

    DEFF Research Database (Denmark)

    Dogliani, M.; Østergaard, C.; Parmentier, G.;

    1996-01-01

    with developments of models of load effects and of structural collapse adopted in reliability formulations which aim at calibrating partial safety factors for ship structural design. New probabilistic models of still-water load effects are developed both for tankers and for containerships. New results are presented......This paper deals with the development of different methods that allow the reliability-based design of ship structures to be transferred from the area of research to the systematic application in current design. It summarises the achievements of a three-year collaborative research project dealing...... structure of several tankers and containerships. The results of the reliability analysis were the basis for the definition of a target safety level which was used to asses the partial safety factors suitable for in a new design rules format to be adopted in modern ship structural design. Finally...

  13. Displacement based multilevel structural optimization

    Science.gov (United States)

    Striz, Alfred G.

    1995-01-01

    Multidisciplinary design optimization (MDO) is expected to play a major role in the competitive transportation industries of tomorrow, i.e., in the design of aircraft and spacecraft, of high speed trains, boats, and automobiles. All of these vehicles require maximum performance at minimum weight to keep fuel consumption low and conserve resources. Here, MDO can deliver mathematically based design tools to create systems with optimum performance subject to the constraints of disciplines such as structures, aerodynamics, controls, etc. Although some applications of MDO are beginning to surface, the key to a widespread use of this technology lies in the improvement of its efficiency. This aspect is investigated here for the MDO subset of structural optimization, i.e., for the weight minimization of a given structure under size, strength, and displacement constraints. Specifically, finite element based multilevel optimization of structures (here, statically indeterminate trusses and beams for proof of concept) is performed. In the system level optimization, the design variables are the coefficients of assumed displacement functions, and the load unbalance resulting from the solution of the stiffness equations is minimized. Constraints are placed on the deflection amplitudes and the weight of the structure. In the subsystems level optimizations, the weight of each element is minimized under the action of stress constraints, with the cross sectional dimensions as design variables. This approach is expected to prove very efficient, especially for complex structures, since the design task is broken down into a large number of small and efficiently handled subtasks, each with only a small number of variables. This partitioning will also allow for the use of parallel computing, first, by sending the system and subsystems level computations to two different processors, ultimately, by performing all subsystems level optimizations in a massively parallel manner on separate

  14. Reliability-based optimization of engineering structures

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard

    2008-01-01

    The theoretical basis for reliability-based structural optimization within the framework of Bayesian statistical decision theory is briefly described. Reliability-based cost benefit problems are formulated and exemplitied with structural optimization. The basic reliability-based optimization prob...

  15. Scaling of structural failure

    Energy Technology Data Exchange (ETDEWEB)

    Bazant, Z.P. [Northwestern Univ., Evanston, IL (United States); Chen, Er-Ping [Sandia National Lab., Albuquerque, NM (United States)

    1997-01-01

    This article attempts to review the progress achieved in the understanding of scaling and size effect in the failure of structures. Particular emphasis is placed on quasibrittle materials for which the size effect is complicated. Attention is focused on three main types of size effects, namely the statistical size effect due to randomness of strength, the energy release size effect, and the possible size effect due to fractality of fracture or microcracks. Definitive conclusions on the applicability of these theories are drawn. Subsequently, the article discusses the application of the known size effect law for the measurement of material fracture properties, and the modeling of the size effect by the cohesive crack model, nonlocal finite element models and discrete element models. Extensions to compression failure and to the rate-dependent material behavior are also outlined. The damage constitutive law needed for describing a microcracked material in the fracture process zone is discussed. Various applications to quasibrittle materials, including concrete, sea ice, fiber composites, rocks and ceramics are presented.

  16. Workshop Proceedings: Toughening Mechanisms in Quasi-Brittle Materials Held on 16-20 July 1990 in Evanston, Illinois

    Science.gov (United States)

    1991-05-05

    Int. J. of Fracture, 12, pp. 475-476. 140 Session 3: Theoretical Fracture Mechanics Considerations Chairs: David Darwin University of Kansas Lawrence...boundary conditions, and can be extremely simple for simple crack configurations (e.g., Rooke and Cartwright , 1976). For instance, for a single flat...solution is based on the edge crack subjected to a uniform tensile far field stress (Rooke and Cartwright , 1976). Notice that KI for this

  17. Motion Structural Optimization Strategy for Rhombic Element Based Foldable Structure

    Directory of Open Access Journals (Sweden)

    Seung Hyun Jeong

    2015-02-01

    Full Text Available This research presents a new systematical design approach of foldable structure composed of several rhombic elements by applying genetic algorithm. As structural shapes represented by a foldable structure can be easily and dramatically morphed by manipulating rotational directions and angle of joints, the foldable structure has been used for various elementary structural members and engineering mechanisms. However a systematic design approach determining detail rotational angle and directions of unit cells for arbitrary shaped target areas has not been proposed yet. This research contributes to it by developing a new structural optimization method determining optimal angle and rotation directions to cover arbitrary shaped target areas of interest with aggregated rhombic elements. To achieve this purpose, we present an optimization formulation minimizing the sum of distances between each reference joint of an arbitrary shaped target area and its closest outer joints of foldable structure. To find out the outer joint set of a given foldable structure, an efficient geometric analysis method based on Delaunay triangulation is also developed and implemented. To show the validity and limitations of the present approach, several foldable structure design problems for two-dimensional arbitrary shaped target areas are solved with the present optimization procedure.

  18. Hydrophobic sponge structure-based triboelectric nanogenerator.

    Science.gov (United States)

    Lee, Keun Young; Chun, Jinsung; Lee, Ju-Hyuck; Kim, Kyeong Nam; Kang, Na-Ri; Kim, Ju-Young; Kim, Myung Hwa; Shin, Kyung-Sik; Gupta, Manoj Kumar; Baik, Jeong Min; Kim, Sang-Woo

    2014-08-06

    Hydrophobic sponge structure-based triboelectric nanogenerators using an inverse opal structured film for sustainable energy harvesting over a wide range of humid atmosphere have been successfully demonstrated. The output voltage and current density reach a record value of 130 V and 0.10 mA cm(-2) , respectively, giving over 10-fold power enhancement, compared with the flat film-based triboelectric nanogenerator. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  19. Towards structure-based protein drug design.

    Science.gov (United States)

    Zhang, Changsheng; Lai, Luhua

    2011-10-01

    Structure-based drug design for chemical molecules has been widely used in drug discovery in the last 30 years. Many successful applications have been reported, especially in the field of virtual screening based on molecular docking. Recently, there has been much progress in fragment-based as well as de novo drug discovery. As many protein-protein interactions can be used as key targets for drug design, one of the solutions is to design protein drugs based directly on the protein complexes or the target structure. Compared with protein-ligand interactions, protein-protein interactions are more complicated and present more challenges for design. Over the last decade, both sampling efficiency and scoring accuracy of protein-protein docking have increased significantly. We have developed several strategies for structure-based protein drug design. A grafting strategy for key interaction residues has been developed and successfully applied in designing erythropoietin receptor-binding proteins. Similarly to small-molecule design, we also tested de novo protein-binder design and a virtual screen of protein binders using protein-protein docking calculations. In comparison with the development of structure-based small-molecule drug design, we believe that structure-based protein drug design has come of age.

  20. Structural choice based on knowledge discovery system

    Institute of Scientific and Technical Information of China (English)

    邢方亮; 王光远

    2002-01-01

    Structural choice is a significant decision having an important influence on structural function, socialeconomics, structural reliability and construction cost. A Case Based Reasoning system with its retrieval partconstructed with a KDD subsystem, is put forward to make a decision for a large scale engineering project. Atypical CBR system consists of four parts: case representation, case retriever, evaluation, and adaptation. Acase library is a set of parameterized excellent and successful structures. For a structural choice, the key pointis that the system must be able to detect the pattern classes hidden in the case library and classify the input pa-rameters into classes properly. That is done by using the KDD Data Mining algorithm based on Self-OrganizingFeature Maps ( SOFM), which makes the whole system more adaptive, self-organizing, self-learning and open.

  1. An Assessment of Compressive Size Effect of Plane Concrete Using Combination of Micro-Plane Damage Based Model and 3D Finite Elements Approach

    Directory of Open Access Journals (Sweden)

    A. Labibzadeh

    2008-01-01

    Full Text Available In recent years, the material behavior dependence of laboratory concrete specimens built with the same concrete mixture under the same load conditions to their geometrical sizes is well established. This phenomenon which is observed not only in concrete but also in most quasi-brittle materials such as rock, ceramic or composite materials is now called as size effect. Many of the existing structural analyzing codes are not able to consider this important feature of concrete structures especially under compressive loadings. However we know that the main purpose of concrete application in structural members is to resist compression. The aim of this study is to show the ability of author's recently developed 3D finite elements code equipped with the proposed author's newly micro-planes damage based model for considering of compressive size effect of plane concrete. To do so, two different sizes of cubic concrete specimens are modeled with mentioned code under the uniaxial compressive test and their fracture mechanisms, pre-peak and post-peak strain-stress paths are investigated. Obtained results reveal the good coincidence with experimental evidences. In fact, the combination of proposed micro-planes damage based model and developed presented 3D finite elements technique creates a powerful numerical tool to capture and predict precisely strain localization and fracture mechanism in the specimens and consequently to assess properly the compressive size effect of plane concrete in analysis and design.

  2. Risk-Based Assessment of Structural Robustness

    Directory of Open Access Journals (Sweden)

    Oana-Mihaela Ioniţă

    2010-01-01

    Full Text Available Providing safety of structures is one of the main aims of design. In traditional design it is achieved by designing structural components against specified limit states. However, as showed the Ronan Point collapse in UK in 1968, when a gas explosion in one of flats on the 18-th floor of the residential building caused the failure of an entire section of the building, this approach is not sufficient. The approach does not exclude the risk of local damage to a structure due to accidental events that can occur during service life of the structure. While probability of occurrence of such events for ordinary structures is low, and, therefore, they are not considered explicitly in design, their effect on structural safety becomes significant if the structure is not robust, that is when some local damage can trigger a chain reaction of failures causing collapse of the whole structure or of a major part of it, the so called progressive collapse. The purpose of this paper is to outline the basic premises for the utilization of risk assessment in evaluating the robustness of structures. In the following the robustness assessment is understood as a process of decision making based on risks.

  3. Reliability-Based Optimization in Structural Engineering

    DEFF Research Database (Denmark)

    Enevoldsen, I.; Sørensen, John Dalsgaard

    1994-01-01

    -based optimal inspection planning and reliability-based experiment planning. It is explained how these optimization problems can be solved by application of similar techniques. The reliability estimation is limited to first order reliability methods (FORM) for both component and systems reliability evaluation......, inclusion of the finite element method as the response evaluation tool and how the size of the problem can be made practicable. Finally, the important task of model evaluation and sensitivity analysis of the optimal solution is treated including a strategy for model-making with both pre and post-analysis.......In this paper reliability-based optimization problems in structural engineering are formulated on the basis of the classical decision theory. Several formulations are presented: Reliability-based optimal design of structural systems with component or systems reliability constraints, reliability...

  4. EM Structure Based and Vacuum Acceleration

    Energy Technology Data Exchange (ETDEWEB)

    Colby, E.R.; /SLAC

    2005-09-27

    The importance of particle acceleration may be judged from the number of applications which require some sort of accelerated beam. In addition to accelerator-based high energy physics research, non-academic applications include medical imaging and treatment, structural biology by x-ray diffraction, pulse radiography, cargo inspection, material processing, food and medical instrument sterilization, and so on. Many of these applications are already well served by existing technologies and will profit only marginally from developments in accelerator technology. Other applications are poorly served, such as structural biology, which is conducted at synchrotron radiation facilities, and medical treatment using proton accelerators, the machines for which are rare because they are complex and costly. Developments in very compact, high brightness and high gradient accelerators will change how accelerators are used for such applications, and potentially enable new ones. Physical and technical issues governing structure-based and vacuum acceleration of charged particles are reviewed, with emphasis on practical aspects.

  5. Bamboo-based Panels for Structural Applications

    Institute of Scientific and Technical Information of China (English)

    CHENXuhe; WANGZheng

    2005-01-01

    With technical assistance from INBAR and the Research Institute of Wood Industry of the Chinese Academy of Forestry, the construction of the Pingbian Primary School was completed in 2004,where bamboo plywood panels and laminated beams were used for the roof trusses, sheathing boards and wall panels. This is the first time that bamboo-based panels are used for structural applications.

  6. Vibrational Based Inspection of Civil Engineering Structures

    DEFF Research Database (Denmark)

    Rytter, Anders

    at the University of Aalborg from 1988 to 1991. Secondly, a research project, In-Field Vibration Based Inspection of Civil Engineering Structures, which has been performed as a pilot project by the Consulting Engineers Rambøll, Hannemann and Højlund in cooperation with the department of Building Technology......The thesis has been written in relation to two different research projects. Firstly, an offshore test programme, Integrated Experimental/Numerical Analysis of the Dynamic behavior of offshore structures, which was performed at the department of Building Technology and Structural Engineering...... and Structural Engineering at the University of Aalborg since the beginning of 1992. Both projects have been supported by the Danish Technical Research Council. Further, the first mentioned project was supported by the Danish Energy Agency. Their financial support is gratefully acknowledged....

  7. STRUCTURAL EVOLUTION IN BIORENEWABLE SOY BASED POLYURETHANES

    Institute of Scientific and Technical Information of China (English)

    Deepa Puthanparambil; Casey Kimball; Shaw Ling Hsu; Zhiyong Ren

    2009-01-01

    Spectroscopic studies have revealed that the amount of polyureas formed and the kinetics of their formation in soy based polyurethane systems are considerably different from traditional systems employing ethylene oxide-propylene oxide (EO-PO) based polyols. The aggregation of polyureas was characterized by the hydrogen bonds formed utilizing FTIR spectroscopy. This study offered the opportunity to assign the previously undefined infrared features. The structural transformation is reflected in the segmental relaxation kinetics characterized by spin-spin diffusion most conveniently measured using low field NMR. The reaction kinetics and the products formed are directly related to the hydrophobic nature of the soy based polyols and its inability to disperse water.

  8. Hyperbolic metamaterials based on Bragg polariton structures

    Science.gov (United States)

    Sedov, E. S.; Charukhchyan, M. V.; Arakelyan, S. M.; Alodzhants, A. P.; Lee, R.-K.; Kavokin, A. V.

    2016-07-01

    A new hyperbolic metamaterial based on a modified semiconductor Bragg mirror structure with embedded periodically arranged quantum wells is proposed. It is shown that exciton polaritons in this material feature hyperbolic dispersion in the vicinity of the second photonic band gap. Exciton-photon interaction brings about resonant nonlinearity leading to the emergence of nontrivial topological polaritonic states. The formation of spatially localized breather-type structures (oscillons) representing kink-shaped solutions of the effective Ginzburg-Landau-Higgs equation slightly oscillating along one spatial direction is predicted.

  9. Distributed Prognostics based on Structural Model Decomposition

    Science.gov (United States)

    Daigle, Matthew J.; Bregon, Anibal; Roychoudhury, I.

    2014-01-01

    Within systems health management, prognostics focuses on predicting the remaining useful life of a system. In the model-based prognostics paradigm, physics-based models are constructed that describe the operation of a system and how it fails. Such approaches consist of an estimation phase, in which the health state of the system is first identified, and a prediction phase, in which the health state is projected forward in time to determine the end of life. Centralized solutions to these problems are often computationally expensive, do not scale well as the size of the system grows, and introduce a single point of failure. In this paper, we propose a novel distributed model-based prognostics scheme that formally describes how to decompose both the estimation and prediction problems into independent local subproblems whose solutions may be easily composed into a global solution. The decomposition of the prognostics problem is achieved through structural decomposition of the underlying models. The decomposition algorithm creates from the global system model a set of local submodels suitable for prognostics. Independent local estimation and prediction problems are formed based on these local submodels, resulting in a scalable distributed prognostics approach that allows the local subproblems to be solved in parallel, thus offering increases in computational efficiency. Using a centrifugal pump as a case study, we perform a number of simulation-based experiments to demonstrate the distributed approach, compare the performance with a centralized approach, and establish its scalability. Index Terms-model-based prognostics, distributed prognostics, structural model decomposition ABBREVIATIONS

  10. Electronic structure of Fe-based superconductors

    Indian Academy of Sciences (India)

    Kalobaran Maiti

    2015-06-01

    Fe-based superconductors have drawn much attention during the last decade due to the presence of superconductivity in materials containing the magnetic element, Fe, and the coexistence of superconductivity and magnetism. Extensive study of the electronic structure of these systems suggested the dominant role of states in their electronic properties, which is significantly different from the cuprate superconductors. In this article, some of our studies of the electronic structure of these fascinating systems employing high-resolution photoemission spectroscopy is reviewed. The combined effect of electron correlation and covalency reveals an interesting scenario in their electronic structure. The contribution of ligand states at the Fermi level is found to be much more significant than indicated in earlier studies. Temperature evolution of the energy bands reveals the signature of transition akin to Lifshitz transition in these systems.

  11. Deployable structures for a human lunar base

    Science.gov (United States)

    Gruber, Petra; Häuplik, Sandra; Imhof, Barbara; Özdemir, Kürsad; Waclavicek, Rene; Perino, Maria Antoinetta

    2007-06-01

    The study Lunar exploration architecture—deployable structures for a lunar base was performed within the Alcatel Alenia Space “Lunar Exploration Architecture” study for the European Space Agency. The purpose of the study was to investigate bionic concepts applicable to deployable structures and to interpret the findings for possible implementation concepts. The study aimed at finding innovative solutions for deployment possibilities. Translating folding/unfolding principles from nature, candidate geometries were developed and researched using models, drawings and visualisations. The use of materials, joints between structural elements and construction details were investigated for these conceptual approaches. Reference scenarios were used to identify the technical and environmental conditions, which served as design drivers. Mechanical issues and the investigation of deployment processes narrowed the selection down to six chosen concepts. Their applicability was evaluated at a conceptual stage in relation to the timescale of the mission.

  12. Collective prediction based on community structure

    Science.gov (United States)

    Jiang, Yasong; Li, Taisong; Zhang, Yan; Yan, Yonghong

    2017-01-01

    Collective prediction algorithms have been used to improve performances when network structures are involved in prediction tasks. The training dataset of such tasks often contain information of content, links and labels, while the testing dataset have only content and link information. Conventional collective prediction algorithms conduct predictions based on the content of a node and the information of its direct neighbors with a base classifier. However, the information of some direct neighbor nodes may be not consistent with the target one. In addition, the information of indirect neighbors can be helpful when that of direct neighbors is scant. In this paper, instead of using information of direct neighbors, we propose to apply community structures in networks to prediction tasks. A community detection method is aggregated into the collective prediction process to improve prediction performance. Experimental results show that the proposed algorithm outperforms a number of standard prediction algorithms specially under conditions that labeled training dataset are limited.

  13. A novel tree structure based watermarking algorithm

    Science.gov (United States)

    Lin, Qiwei; Feng, Gui

    2008-03-01

    In this paper, we propose a new blind watermarking algorithm for images which is based on tree structure. The algorithm embeds the watermark in wavelet transform domain, and the embedding positions are determined by significant coefficients wavelets tree(SCWT) structure, which has the same idea with the embedded zero-tree wavelet (EZW) compression technique. According to EZW concepts, we obtain coefficients that are related to each other by a tree structure. This relationship among the wavelet coefficients allows our technique to embed more watermark data. If the watermarked image is attacked such that the set of significant coefficients is changed, the tree structure allows the correlation-based watermark detector to recover synchronously. The algorithm also uses a visual adaptive scheme to insert the watermark to minimize watermark perceptibility. In addition to the watermark, a template is inserted into the watermarked image at the same time. The template contains synchronization information, allowing the detector to determine the geometric transformations type applied to the watermarked image. Experimental results show that the proposed watermarking algorithm is robust against most signal processing attacks, such as JPEG compression, median filtering, sharpening and rotating. And it is also an adaptive method which shows a good performance to find the best areas to insert a stronger watermark.

  14. Guideline based structured documentation: the final goal?

    Science.gov (United States)

    Bürkle, Thomas; Ganslandt, Thomas; Tübergen, Dirk; Menzel, Josef; Kucharzik, Torsten; Neumann, Klaus; Schlüter, Stefan; Müller, Marcel; Veltmann, Ursula; Prokosch, Hans-Ulrich

    2002-01-01

    Structured documentation of medical procedures facilitates information retrieval for research and therapy and may help to improve patient care. Most medical documents until today however consist mainly of unstructured narrative text. Here we present an application for endoscopy which is not only fully integrated into a comprehensive clinical information system, but which also supports various degrees of structuring examination reports. The application is used routinely in a German University hospital since summer 2000. We present the first unstructured version which permits storage of a free text report together with selected examination images. The next step added improved structure to the document using a catalogue of index terms. The practical advantages of selective patient retrieval are described. Today we use a version which supports fully structured, guideline based documentation of endoscopy reports in order to automatically generate essential classification codes and the narrative examination report All versions have advantages and disadvantages and we conclude that guideline based documentation may not be suitable for all endoscopy cases.

  15. Light weight cellular structures based on aluminium

    Energy Technology Data Exchange (ETDEWEB)

    Prakash, O. [Indian Inst. of Tech., Kanpur (India); Embury, J.D.; Sinclair, C. [McMaster Univ., Hamilton, ON (Canada); Sang, H. [Queen`s Univ., Kingston, ON (Canada); Silvetti, P. [Cordoba Univ. Nacional (Argentina). Facultad de Ciencias Exactas, Fisicas y Naturales

    1997-02-01

    An interesting form of lightweight material which has emerged in the past 2 decades is metallic foam. This paper deals with the basic concepts of making metallic foams and a detailed study of foams produced from Al-SiC. In addition, some aspects of cellular solids based on honeycomb structures are outlined including the concept of producing both two-phase foams and foams with composite walls.

  16. General Structures of Block Based Interpolational Function

    Institute of Scientific and Technical Information of China (English)

    ZOU LE; TANG SHUO; Ma Fu-ming

    2012-01-01

    We construct general structures of one and two variable interpolation function,without depending on the existence of divided difference or inverse differences,and we also discuss the block based osculatory interpolation in one variable case.Clearly,our method offers many flexible interpolation schemes for choices.Error terms for the interpolation are determined and numerical examples are given to show the effectiveness of the results.

  17. Elastoplastic cup model for cement-based materials

    Directory of Open Access Journals (Sweden)

    Yan ZHANG

    2010-03-01

    Full Text Available Based on experimental data obtained from triaxial tests and a hydrostatic test, a cup model was formulated. Two plastic mechanisms, respectively a deviatoric shearing and a pore collapse, are taken into account. This model also considers the influence of confining pressure. In this paper, the calibration of the model is detailed and numerical simulations of the main mechanical behavior of cement paste over a large range of stress are described, showing good agreement with experimental results. The case study shows that this cup model has extensive applicability for cement-based materials and other quasi-brittle and high-porosity materials in a complex stress state.

  18. Structure-Based Design of Ricin Inhibitors

    Directory of Open Access Journals (Sweden)

    Jon D. Robertus

    2011-10-01

    Full Text Available Ricin is a potent cytotoxin easily purified in large quantities. It presents a significant public health concern due to its potential use as a bioterrorism agent. For this reason, extensive efforts have been underway to develop antidotes against this deadly poison. The catalytic A subunit of the heterodimeric toxin has been biochemically and structurally well characterized, and is an attractive target for structure-based drug design. Aided by computer docking simulations, several ricin toxin A chain (RTA inhibitors have been identified; the most promising leads belonging to the pterin family. Development of these lead compounds into potent drug candidates is a challenging prospect for numerous reasons, including poor solubility of pterins, the large and highly polar secondary binding pocket of RTA, as well as the enzyme’s near perfect catalytic efficiency and tight binding affinity for its natural substrate, the eukaryotic ribosome. To date, the most potent RTA inhibitors developed using this approach are only modest inhibitors with apparent IC50 values in the 10−4 M range, leaving significant room for improvement. This review highlights the variety of techniques routinely employed in structure-based drug design projects, as well as the challenges faced in the design of RTA inhibitors.

  19. Theoretical NMR correlations based Structure Discussion

    Directory of Open Access Journals (Sweden)

    Junker Jochen

    2011-07-01

    Full Text Available Abstract The constitutional assignment of natural products by NMR spectroscopy is usually based on 2D NMR experiments like COSY, HSQC, and HMBC. The actual difficulty of the structure elucidation problem depends more on the type of the investigated molecule than on its size. The moment HMBC data is involved in the process or a large number of heteroatoms is present, a possibility of multiple solutions fitting the same data set exists. A structure elucidation software can be used to find such alternative constitutional assignments and help in the discussion in order to find the correct solution. But this is rarely done. This article describes the use of theoretical NMR correlation data in the structure elucidation process with WEBCOCON, not for the initial constitutional assignments, but to define how well a suggested molecule could have been described by NMR correlation data. The results of this analysis can be used to decide on further steps needed to assure the correctness of the structural assignment. As first step the analysis of the deviation of carbon chemical shifts is performed, comparing chemical shifts predicted for each possible solution with the experimental data. The application of this technique to three well known compounds is shown. Using NMR correlation data alone for the description of the constitutions is not always enough, even when including 13C chemical shift prediction.

  20. Protein Structure Network-based Drug Design.

    Science.gov (United States)

    Liang, Zhongjie; Hu, Guang

    2016-01-01

    Although structure-based drug design (SBDD) has become an indispensable tool in drug discovery for a long time, it continues to pose major challenges to date. With the advancement of "omics" techniques, systems biology has enriched SBDD into a new era, called polypharmacology, in which multi-targets drug or drug combination is designed to fight complex diseases. As a preliminary tool in systems biology, protein structure networks (PSNs) treat a protein as a set of residues linked by edges corresponding to the intramolecular interactions existing in folded structures between the residues. The PSN offers a computationally efficient tool to study the structure and function of proteins, and thus may facilitate structurebased drug design. Herein, we provide an overview of recent advances in PSNs, from predicting functionally important residues, to charactering protein-protein interactions and allosteric communication paths. Furthermore, we discuss potential pharmacological applications of PSN concepts and tools, and highlight the application to two families of drug targets, GPCRs and Hsp90. Although the application of PSNs as a framework for computer-aided drug discovery has been limited to date, we put forward the potential utility value in the near future and propose the PSNs could also serve as a new tool for polypharmacology research.

  1. Adaptive GOP structure based on motion coherence

    Science.gov (United States)

    Ma, Yanzhuo; Wan, Shuai; Chang, Yilin; Yang, Fuzheng; Wang, Xiaoyu

    2009-08-01

    Adaptive Group of Pictures (GOP) is helpful for increasing the efficiency of video encoding by taking account of characteristics of video content. This paper proposes a method for adaptive GOP structure selection for video encoding based on motion coherence, which extracts key frames according to motion acceleration, and assigns coding type for each key and non-key frame correspondingly. Motion deviation is then used instead of motion magnitude in the selection of the number of B frames. Experimental results show that the proposed method for adaptive GOP structure selection achieves performance gain of 0.2-1dB over the fixed GOP, and has the advantage of better transmission resilience. Moreover, this method can be used in real-time video coding due to its low complexity.

  2. BASE Flexible Array Preliminary Lithospheric Structure Analysis

    Science.gov (United States)

    Yeck, W. L.; Sheehan, A. F.; Anderson, M. L.; Siddoway, C. S.; Erslev, E.; Harder, S. H.; Miller, K. C.

    2009-12-01

    The Bighorns Arch Seismic Experiment (BASE) is a Flexible Array experiment integrated with EarthScope. The goal of BASE is to develop a better understanding of how basement-involved foreland arches form and what their link is to plate tectonic processes. To achieve this goal, the crustal structure under the Bighorn Mountain range, Bighorn Basin, and Powder River Basin of northern Wyoming and southern Montana are investigated through the deployment of 35 broadband seismometers, 200 short period seismometers, 1600 “Texan” instruments using active sources and 800 “Texan” instruments monitoring passive sources, together with field structural analysis of brittle structures. The novel combination of these approaches and anticipated simultaneous data inversion will give a detailed structural crustal image of the Bighorn region at all levels of the crust. Four models have been proposed for the formation of the Bighorn foreland arch: subhorizontal detachment within the crust, lithospheric buckling, pure shear lithospheric thickening, and fault blocks defined by lithosphere-penetrating thrust faults. During the summer of 2009, we deployed 35 broadband instruments, which have already recorded several magnitude 7+ teleseismic events. Through P wave receiver function analysis of these 35 stations folded in with many EarthScope Transportable Array stations in the region, we present a preliminary map of the Mohorovicic discontinuity. This crustal map is our first test of how the unique Moho geometries predicted by the four hypothesized models of basement involved arches fit seismic observations for the Bighorn Mountains. In addition, shear-wave splitting analysis for our first few recorded teleseisms helps us determine if strong lithospheric deformation is preserved under the range. These analyses help lead us to our final goal, a complete 4D (3D spatial plus temporal) lithospheric-scale model of arch formation which will advance our understanding of the mechanisms

  3. Vision based condition assessment of structures

    Energy Technology Data Exchange (ETDEWEB)

    Uhl, Tadeusz; Kohut, Piotr; Holak, Krzysztof; Krupinski, Krzysztof, E-mail: tuhl@agh.edu.pl, E-mail: pko@agh.edu.pl, E-mail: holak@agh.edu.pl, E-mail: krzysiek.krupinski@wp.pl [Department of Robotics and Mechatronics, AGH-University of Science and Technology, Al.Mickiewicza 30, 30-059 Cracow (Poland)

    2011-07-19

    In this paper, a vision-based method for measuring a civil engineering construction's in-plane deflection curves is presented. The displacement field of the analyzed object which results from loads was computed by means of a digital image correlation coefficient. Image registration techniques were introduced to increase the flexibility of the method. The application of homography mapping enabled the deflection field to be computed from two images of the structure, acquired from two different points in space. An automatic shape filter and a corner detector were implemented to calculate the homography mapping between the two views. The developed methodology, created architecture and the capabilities of software tools, as well as experimental results obtained from tests made on a lab set-up and civil engineering constructions, are discussed.

  4. Lagrangian based methods for coherent structure detection

    Energy Technology Data Exchange (ETDEWEB)

    Allshouse, Michael R., E-mail: mallshouse@chaos.utexas.edu [Center for Nonlinear Dynamics and Department of Physics, University of Texas at Austin, Austin, Texas 78712 (United States); Peacock, Thomas, E-mail: tomp@mit.edu [Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139 (United States)

    2015-09-15

    There has been a proliferation in the development of Lagrangian analytical methods for detecting coherent structures in fluid flow transport, yielding a variety of qualitatively different approaches. We present a review of four approaches and demonstrate the utility of these methods via their application to the same sample analytic model, the canonical double-gyre flow, highlighting the pros and cons of each approach. Two of the methods, the geometric and probabilistic approaches, are well established and require velocity field data over the time interval of interest to identify particularly important material lines and surfaces, and influential regions, respectively. The other two approaches, implementing tools from cluster and braid theory, seek coherent structures based on limited trajectory data, attempting to partition the flow transport into distinct regions. All four of these approaches share the common trait that they are objective methods, meaning that their results do not depend on the frame of reference used. For each method, we also present a number of example applications ranging from blood flow and chemical reactions to ocean and atmospheric flows.

  5. Structure Based Antibody-Like Peptidomimetics

    Directory of Open Access Journals (Sweden)

    Mark I. Greene

    2012-02-01

    Full Text Available Biologics such as monoclonal antibodies (mAb and soluble receptors represent new classes of therapeutic agents for treatment of several diseases. High affinity and high specificity biologics can be utilized for variety of clinical purposes. Monoclonal antibodies have been used as diagnostic agents when coupled with radionuclide, immune modulatory agents or in the treatment of cancers. Among other limitations of using large molecules for therapy the actual cost of biologics has become an issue. There is an effort among chemists and biologists to reduce the size of biologics which includes monoclonal antibodies and receptors without a reduction of biological efficacy. Single chain antibody, camel antibodies, Fv fragments are examples of this type of deconstructive process. Small high-affinity peptides have been identified using phage screening. Our laboratory used a structure-based approach to develop small-size peptidomimetics from the three-dimensional structure of proteins with immunoglobulin folds as exemplified by CD4 and antibodies. Peptides derived either from the receptor or their cognate ligand mimics the functions of the parental macromolecule. These constrained peptides not only provide a platform for developing small molecule drugs, but also provide insight into the atomic features of protein-protein interactions. A general overview of the reduction of monoclonal antibodies to small exocyclic peptide and its prospects as a useful diagnostic and as a drug in the treatment of cancer are discussed.

  6. Structure-Based Algorithms for Microvessel Classification

    KAUST Repository

    Smith, Amy F.

    2015-02-01

    © 2014 The Authors. Microcirculation published by John Wiley & Sons Ltd. Objective: Recent developments in high-resolution imaging techniques have enabled digital reconstruction of three-dimensional sections of microvascular networks down to the capillary scale. To better interpret these large data sets, our goal is to distinguish branching trees of arterioles and venules from capillaries. Methods: Two novel algorithms are presented for classifying vessels in microvascular anatomical data sets without requiring flow information. The algorithms are compared with a classification based on observed flow directions (considered the gold standard), and with an existing resistance-based method that relies only on structural data. Results: The first algorithm, developed for networks with one arteriolar and one venular tree, performs well in identifying arterioles and venules and is robust to parameter changes, but incorrectly labels a significant number of capillaries as arterioles or venules. The second algorithm, developed for networks with multiple inlets and outlets, correctly identifies more arterioles and venules, but is more sensitive to parameter changes. Conclusions: The algorithms presented here can be used to classify microvessels in large microvascular data sets lacking flow information. This provides a basis for analyzing the distinct geometrical properties and modelling the functional behavior of arterioles, capillaries, and venules.

  7. Structure-based characterization of multiprotein complexes.

    Science.gov (United States)

    Wiederstein, Markus; Gruber, Markus; Frank, Karl; Melo, Francisco; Sippl, Manfred J

    2014-07-08

    Multiprotein complexes govern virtually all cellular processes. Their 3D structures provide important clues to their biological roles, especially through structural correlations among protein molecules and complexes. The detection of such correlations generally requires comprehensive searches in databases of known protein structures by means of appropriate structure-matching techniques. Here, we present a high-speed structure search engine capable of instantly matching large protein oligomers against the complete and up-to-date database of biologically functional assemblies of protein molecules. We use this tool to reveal unseen structural correlations on the level of protein quaternary structure and demonstrate its general usefulness for efficiently exploring complex structural relationships among known protein assemblies.

  8. Reliability-Based Optimization of Structural Elements

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard

    In this paper structural elements from an optimization point of view are considered, i.e. only the geometry of a structural element is optimized. Reliability modelling of the structural element is discussed both from an element point of view and from a system point of view. The optimization...

  9. Reliability Based Optimization of Structural Systems

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard

    1987-01-01

    The optimization problem to design structural systems such that the reliability is satisfactory during the whole lifetime of the structure is considered in this paper. Some of the quantities modelling the loads and the strength of the structure are modelled as random variables. The reliability...

  10. NATO Advanced Research Workshop. Toughening Mechanisms in Quasi-Brittle Materials, Held in Evanston, Illinois on July 16-20, 1990

    Science.gov (United States)

    1990-07-20

    Ceram. Soc., 56, 192-197. Wong T.-F. and Biegel R. (1985) Effects of pressure on the micromechanics of faulting in San Marcos gabbro , J. Struct. Geol., 7...2). A summary of results according to TPM based on test data from several laboratories around the world (Karihaloo & Nallathambi 1990a) is given in

  11. Earthquake Analysis of Structure by Base Isolation Technique in SAP

    OpenAIRE

    T. Subramani; J. Jothi

    2014-01-01

    This paper presents an overview of the present state of base isolation techniques with special emphasis and a brief on other techniques developed world over for mitigating earthquake forces on the structures. The dynamic analysis procedure for isolated structures is briefly explained. The provisions of FEMA 450 for base isolated structures are highlighted. The effects of base isolation on structures located on soft soils and near active faults are given in brief. Simple case s...

  12. Structure based alignment and clustering of proteins (STRALCP)

    Science.gov (United States)

    Zemla, Adam T.; Zhou, Carol E.; Smith, Jason R.; Lam, Marisa W.

    2013-06-18

    Disclosed are computational methods of clustering a set of protein structures based on local and pair-wise global similarity values. Pair-wise local and global similarity values are generated based on pair-wise structural alignments for each protein in the set of protein structures. Initially, the protein structures are clustered based on pair-wise local similarity values. The protein structures are then clustered based on pair-wise global similarity values. For each given cluster both a representative structure and spans of conserved residues are identified. The representative protein structure is used to assign newly-solved protein structures to a group. The spans are used to characterize conservation and assign a "structural footprint" to the cluster.

  13. Distributed Prognostics Based on Structural Model Decomposition

    Data.gov (United States)

    National Aeronautics and Space Administration — Within systems health management, prognostics focuses on predicting the remaining useful life of a system. In the model-based prognostics paradigm, physics-based...

  14. Amyloid beta: structure, biology and structure-based therapeutic development.

    Science.gov (United States)

    Chen, Guo-Fang; Xu, Ting-Hai; Yan, Yan; Zhou, Yu-Ren; Jiang, Yi; Melcher, Karsten; Xu, H Eric

    2017-09-01

    Amyloid beta peptide (Aβ) is produced through the proteolytic processing of a transmembrane protein, amyloid precursor protein (APP), by β- and γ-secretases. Aβ accumulation in the brain is proposed to be an early toxic event in the pathogenesis of Alzheimer's disease, which is the most common form of dementia associated with plaques and tangles in the brain. Currently, it is unclear what the physiological and pathological forms of Aβ are and by what mechanism Aβ causes dementia. Moreover, there are no efficient drugs to stop or reverse the progression of Alzheimer's disease. In this paper, we review the structures, biological functions, and neurotoxicity role of Aβ. We also discuss the potential receptors that interact with Aβ and mediate Aβ intake, clearance, and metabolism. Additionally, we summarize the therapeutic developments and recent advances of different strategies for treating Alzheimer's disease. Finally, we will report on the progress in searching for novel, potentially effective agents as well as selected promising strategies for the treatment of Alzheimer's disease. These prospects include agents acting on Aβ, its receptors and tau protein, such as small molecules, vaccines and antibodies against Aβ; inhibitors or modulators of β- and γ-secretase; Aβ-degrading proteases; tau protein inhibitors and vaccines; amyloid dyes and microRNAs.

  15. Combinatorics of RNA Secondary Structures with Base Triples.

    Science.gov (United States)

    Müller, Robert; Nebel, Markus E

    2015-07-01

    The structure of RNA has been the subject of intense research over the last decades due to its importance for the correct functioning of RNA molecules in biological processes. Hence, a large number of models for RNA folding and corresponding algorithms for structure prediction have been developed. However, previous models often only consider base pairs, although every base is capable of up to three edge-to-edge interactions with other bases. Recently, Höner zu Siederdissen et al. presented an extended model of RNA secondary structure, including base triples together with a folding algorithm-the first thermodynamics-based algorithm that allows the prediction of secondary structures with base triples. In this article, we investigate the search space processed by this new algorithm, that is, the combinatorics of extended RNA secondary structures with base triples. We present generalized definitions for structural motifs like hairpins, stems, bulges, or interior loops occurring in structures with base triples. Furthermore, we prove precise asymptotic results for the number of different structures (size of search space) and expectations for various parameters associated with structural motifs (typical shape of folding). Our analysis shows that the asymptotic number of secondary structures of size n increases exponentially to [Formula: see text] compared to the classic model by Stein and Waterman for which [Formula: see text] structures exist. A comparison with the classic model reveals large deviations in the expected structural appearance, too. The inclusion of base triples constitutes a significant refinement of the combinatorial model of RNA secondary structure, which, by our findings, is quantitatively characterized. Our results are of special theoretical interest, because a closer look at the numbers involved suggests that extended RNA secondary structures constitute a new combinatorial class not bijective with any other combinatorial objects studied so far.

  16. Risk Based Inspection Planning of Ageing Structures

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Ersdal, Gerhard

    2008-01-01

    collapse of the structure. The importance of each component can be measured by the RIF (Residual Influence Factor) for each component and is illustrated by examples. When an installation becomes older then the number of fatigue critical components can be expected to increase. If the maximum acceptable....... Different approaches for updating inspection plans for older installations are considered in order to achieve decreased inspection intervals as the structure are ageing. The most promising method consists in increasing the rate of defects / crack initiation at the end of the expected lifetime. Different...

  17. Modal Based Fatigue Monitoring of Steel Structures

    DEFF Research Database (Denmark)

    Graugaard-Jensen, J.; Brincker, Rune; Hjelm, H. P.;

    2005-01-01

    compared with direct strain gauge measurements and it appears that the difference between the strains measured by strain gauges and the strains estimated by the presented technique is quite small. Looking at the fatigue of the lattice pylon it appears that the estimated damage is significantly smaller than...... by applying the mode shapes of the calibrated Finite Element model and strains are obtained using the shape functions for the actual elements. The technique has been applied on a model frame structure in the laboratory and on a wind loaded lattice pylon structure. In both cases the estimated stresses has been...

  18. Reliability-Based Design of Coastal Structures

    DEFF Research Database (Denmark)

    Burcharth, H. F.

    1997-01-01

    The objective of this paper is to introduce the application of reliability theory for conceptual design and evaluation of coastal structures. It is without the scope to discuss the validity and quality of the various design formulae available for coastal structures. The contents of the paper...... Engineering. Burcharth, H.F. (1993) Design of Breakwaters. Aalborg University. Department of Civil Engineering. Aalborg, Denmark. (Note). Burcbarth, H.F., Dalsgaard S9lrensen, J ., Cbristiani, E. (1995} Application for reliability analysis for optimal design of monolithic vertical wall breakwaters....... Proceedings Conference of Port and Coastal Engineering in developing countries. Rio de Janeiro, Brazil, 1995....

  19. Structural Health Monitoring Using Neural Network Based Vibrational System Identification

    CERN Document Server

    Sofge, Donald A

    2007-01-01

    Composite fabrication technologies now provide the means for producing high-strength, low-weight panels, plates, spars and other structural components which use embedded fiber optic sensors and piezoelectric transducers. These materials, often referred to as smart structures, make it possible to sense internal characteristics, such as delaminations or structural degradation. In this effort we use neural network based techniques for modeling and analyzing dynamic structural information for recognizing structural defects. This yields an adaptable system which gives a measure of structural integrity for composite structures.

  20. Spatial interpolation approach based on IDW with anisotropic spatial structures

    Science.gov (United States)

    Li, Jia; Duan, Ping; Sheng, Yehua; Lv, Haiyang

    2015-12-01

    In many interpolation methods, with its simple interpolation principle, Inverse distance weighted (IDW) interpolation is one of the most common interpolation method. There are anisotropic spatial structures with actual geographical spatial phenomenon. When the IDW interpolation is used, anisotropic spatial structures should be considered. Geostatistical theory has a characteristics of exploring anisotropic spatial structures. In this paper, spatial interpolation approach based on IDW with anisotropic spatial structures is proposed. The DEM data is tested in this paper to prove reliability of the IDW interpolation considering anisotropic spatial structures. Experimental results show that IDW interpolation considering anisotropic spatial structures can improve interpolation precision when sampling data has anisotropic spatial structures feature.

  1. Reliability based Design of Coastal Structures

    DEFF Research Database (Denmark)

    Burcharth, H. F.

    2003-01-01

    , for example the expectation (mean) value of the 100-year return period event. However, this selection is often made without consideration of the involved uncertainties. In most cases the resistance is defined in terms of the load that causes a certain design impact or damage to the structure...

  2. Risk based design of civil structures

    NARCIS (Netherlands)

    Van Gelder, P.; Roos, A.; Vrijling, H.

    2001-01-01

    The Art and Science of Model Building: A Bayesian Approach, by Prof. A. Der Kiureghian; The talk will describe a Bayesian approach to developing models, with special emphasis on limit-state models for reinforced concrete structures. The formulation can incorporate all kinds of information (theoretic

  3. Yield criteria for quasibrittle and frictional materials

    CERN Document Server

    Bigoni, Davide

    2010-01-01

    A new yield/damage function is proposed for modelling the inelastic behaviour of a broad class of pressure-sensitive, frictional, ductile and brittle-cohesive materials. The yield function allows the possibility of describing a transition between the shape of a yield surface typical of a class of materials to that typical of another class of materals. This is a fundamental key to model the behaviour of materials which become cohesive during hardening (so that the shape of the yield surface evolves from that typical of a granular material to that typical of a dense material), or which decrease cohesion due to damage accumulation. The proposed yield function is shown to agree with a variety of experimental data relative to soil, concrete, rock, metallic and composite powders, metallic foams, porous metals, and polymers. The yield function represents a single, convex and smooth surface in stress space approaching as limit situations well-known criteria and the extreme limits of convexity in the deviatoric plane....

  4. Nonlocal Theory for Fracturing of Quasibrittle Materials.

    Science.gov (United States)

    1994-03-01

    fracture behavior and its impact on design code, ACI Fall Con- vention, San Juan, Puerto Rico, October 29, 1992. 1621 Discrete element modeling of...eaeieengf’em Mi.Heweitser Uxirenris^ His research mieieests i’clairt faitie andfract applicatioms to htictcura destga. p Fiv. 2- TesI etrup ’eIr

  5. CSTutor: A Sketch-Based Tool for Visualizing Data Structures

    Science.gov (United States)

    Buchanan, Sarah; Laviola, Joseph J., Jr.

    2014-01-01

    We present CSTutor, a sketch-based interface designed to help students understand data structures, specifically Linked Lists, Binary Search Trees, AVL Trees, and Heaps. CSTutor creates an environment that seamlessly combines a user's sketched diagram and code. In each of these data structure modes, the user can naturally sketch a data structure on…

  6. Secure data structures based on multi-party computation

    DEFF Research Database (Denmark)

    Toft, Tomas

    2011-01-01

    This work considers data structures based on multi-party computation (MPC) primitives: structuring secret (e.g. secret shared and potentially unknown) data such that it can both be queried and updated efficiently. Implementing an oblivious RAM (ORAM) using MPC allows any existing data structure...

  7. Topology Optimization in Damping Structure Based on ESO

    Institute of Scientific and Technical Information of China (English)

    GUO Zhong-ze; CHEN Yu-ze; HOU Qiang

    2008-01-01

    The damping material optimal placement for the structure with damping layer is studied based on evolutionary structural optimization (ESO) to maximize modal loss factors. A mathematical model is constructed with the objective function defined as the maximum of modal loss factors of the structure and design constraints function defined as volume fraction ofdamping material. The optimal placement is found. Several examples are presented for verification. The results demonstratethat the method based on ESO is effective in solving the topology optimization of the structure with uncon-strained damping layer and constrained damping layer. This optimization method suits for free and constrained damping structures.

  8. Dynamics-based Nondestructive Structural Monitoring Techniques

    Science.gov (United States)

    2012-06-21

    in the practice of non- destructive evaluation ( NDE ) and structural health monitoring (SHM). Guided wave techniques have several advantages over...conventional bulk wave ultrasonic NDE /SHM techniques. Some of these advantages are outlined in Table I. However, in addition to the advantages of...PVDF transducers for SHM applications with controlled guided wave modes and frequencies [7]. Wilcox used EMATs with circular coils in a guided wave

  9. Dynamics-based Nondestructive Structural Monitoring Teclrniques

    Science.gov (United States)

    2012-05-21

    destructive evaluation ( NDE ) and structural health monitoring (SHM). Guided wave techniques have several advantages over conventional bulk wave...ultrasonic NDE /SHM techniques. Some of these advantages are outlined in Table I. However, in addition to the advantages of guided waves comes an...PVDF transducers for SHM applications with controlled guided wave modes and frequencies [7]. Wilcox used EMATs with circular coils in a guided wave

  10. Identification of protein superfamily from structure- based sequence motif

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The structure-based sequence motif of the distant proteins in evolution, protein tyrosine phosphatases (PTP) Ⅰ and Ⅱ superfamilies, as an example, has been defined by the structural comparison, structure-based sequence alignment and analyses on substitution patterns of residues in common sequence conserved regions. And the phosphatases Ⅰ and Ⅱ can be correctly identified together by the structure-based PTP sequence motif from SWISS-PROT and TrEBML databases. The results show that the correct rates of identification are over 98%. This is the first time to identify PTP Ⅰ and Ⅱ together by this motif.

  11. [Structuralization of digestive endoscopy report based on NLP].

    Science.gov (United States)

    Kong, Xiao-feng; Li, Ying; Li, Hao-min; Lu, Xu-dong

    2008-09-01

    This paper presents a method based on NLP to realize structuralization of digestive endoscopy reports. The method is taking advantage of existing NLP's processing technologies and introducing minimal standard terminology (MST) to transform a narrative gastroscopy report into the structuralization report based on MST, whose accuracy rate is 92.3%.

  12. Benefits of Risk Based Inspection Planning for Offshore Structures

    DEFF Research Database (Denmark)

    Straub, D.M.; Goyet, J.; Sørensen, John Dalsgaard

    2006-01-01

    The economical benefits of applying risk-based inspection planning (RBI) for offshore structures subject to fatigue are evaluated based on experiences from past industrial projects. To this end, the factors influencing the cost of inspection, repair and failure of structures are discussed......, the financial benefit of RBI is assessed....

  13. RM-structure alignment based statistical machine translation model

    Institute of Scientific and Technical Information of China (English)

    Sun Jiadong; Zhao Tiejun

    2008-01-01

    A novel model based on structure alignments is proposed for statistical machine translation in this paper.Meta-structure and sequence of meta-structure for a parse tree are defined.During the translation process, a parse tree is decomposed to deal with the structure divergence and the alignments can be constructed at different levels of recombination of meta-structure (RM).This method can perform the structure mapping across the sub-tree structure between languages.As a result, we get not only the translation for the target language, but sequence of meta-structure of its parse tree at the same time.Experiments show that the model in the framework of log-linear model has better generative ability and significantly outperforms Pharaoh, a phrase-based system.

  14. ON THE STRUCTURES OF RAM-BASED CHINESE CHARACTER LIBRARIES

    Institute of Scientific and Technical Information of China (English)

    钱培德

    1991-01-01

    The Chinese character library is one of the important data structures in the Chinese information Processing system.The behavior of the whole system depends directly on the reasonableness of design for its structure.This paper expounds the structures of RAM-based Chinese character libraries,static and dynamic ,The paper offers a descriptive method for this behavior and inquires into some algorithms related to the structures mentioned above.

  15. Structure-based bayesian sparse reconstruction

    KAUST Repository

    Quadeer, Ahmed Abdul

    2012-12-01

    Sparse signal reconstruction algorithms have attracted research attention due to their wide applications in various fields. In this paper, we present a simple Bayesian approach that utilizes the sparsity constraint and a priori statistical information (Gaussian or otherwise) to obtain near optimal estimates. In addition, we make use of the rich structure of the sensing matrix encountered in many signal processing applications to develop a fast sparse recovery algorithm. The computational complexity of the proposed algorithm is very low compared with the widely used convex relaxation methods as well as greedy matching pursuit techniques, especially at high sparsity. © 1991-2012 IEEE.

  16. Structural Bases of Postresuscitative Heart Failure

    Directory of Open Access Journals (Sweden)

    V. T. Dolgikh

    2005-01-01

    Full Text Available An experiment on 106 non-inbred male albino rats undergone 4-minute clinical death from acute blood loss has revealed that the first three days after resuscitation are marked by a concomitance of vascular disorders and cardiomyocytic dystrophic changes, the leading role being played by sludge, stasis, thrombosis, increased vascular permeability, perivascular edema, and hemorrhages. Cardiomyocytic destruction (various contractures, block-like myofibrillolysis, myocytoly-sis is a structural basis of postresuscitative heart failure. Three days later the heart displayed concomitant processes of recovery and damage. Three types of cardiac morphological changes have been identified in relation to the ratio of these processes.

  17. Maximality-Based Structural Operational Semantics for Petri Nets

    Science.gov (United States)

    Saīdouni, Djamel Eddine; Belala, Nabil; Bouneb, Messaouda

    2009-03-01

    The goal of this work is to exploit an implementable model, namely the maximality-based labeled transition system, which permits to express true-concurrency in a natural way without splitting actions on their start and end events. One can do this by giving a maximality-based structural operational semantics for the model of Place/Transition Petri nets in terms of maximality-based labeled transition systems structures.

  18. Musical Structural Analysis Database Based on GTTM

    OpenAIRE

    Hamanaka, Masatoshi; Hirata, Keiji; Tojo, Satoshi

    2014-01-01

    This paper, we present the publication of our analysis data and analyzing tool based on the generative theory of tonal music (GTTM). Musical databases such as score databases, instrument sound databases, and musical pieces with standard MIDI files and annotated data are key to advancements in the field of music information technology. We started implementing the GTTM on a computer in 2004 and ever since have collected and publicized test data by musicologists in a step-by-step manner. In our ...

  19. Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies

    Indian Academy of Sciences (India)

    Purshotam Sharma; Abhijit Mitra; Sitansh Sharma; Harjinder Singh

    2007-09-01

    The base pairing patterns in RNA structures are more versatile and completely different as compared to DNA. We present here results of ab-initio studies of structures and interaction energies of eight selected RNA base pairs reported in literature. Interaction energies, including BSSE correction, of hydrogen added crystal geometries of base pairs have been calculated at the HF/6-31G∗∗ level. The structures and interaction energies of the base pairs in the crystal geometry are compared with those obtained after optimization of the base pairs. We find that the base pairs become more planar on full optimization. No change in the hydrogen bonding pattern is seen. It is expected that the inclusion of appropriate considerations of many of these aspects of RNA base pairing would significantly improve the accuracy of RNA secondary structure prediction.

  20. Earthquake Analysis of Structure by Base Isolation Technique in SAP

    Directory of Open Access Journals (Sweden)

    T. Subramani

    2014-06-01

    Full Text Available This paper presents an overview of the present state of base isolation techniques with special emphasis and a brief on other techniques developed world over for mitigating earthquake forces on the structures. The dynamic analysis procedure for isolated structures is briefly explained. The provisions of FEMA 450 for base isolated structures are highlighted. The effects of base isolation on structures located on soft soils and near active faults are given in brief. Simple case study on natural base isolation using naturally available soils is presented. Also, the future areas of research are indicated. Earthquakes are one of nature IS greatest hazards; throughout historic time they have caused significant loss offline and severe damage to property, especially to man-made structures. On the other hand, earthquakes provide architects and engineers with a number of important design criteria foreign to the normal design process. From well established procedures reviewed by many researchers, seismic isolation may be used to provide an effective solution for a wide range of seismic design problems. The application of the base isolation techniques to protect structures against damage from earthquake attacks has been considered as one of the most effective approaches and has gained increasing acceptance during the last two decades. This is because base isolation limits the effects of the earthquake attack, a flexible base largely decoupling the structure from the ground motion, and the structural response accelerations are usually less than the ground acceleration. In general, the increase of additional viscous damping in the structure may reduce displacement and acceleration responses of the structure. This study also seeks to evaluate the effects of additional damping on the seismic response when compared with structures without additional damping for the different ground motions.

  1. Dissimilarity-based classification of anatomical tree structures

    DEFF Research Database (Denmark)

    Sørensen, Lauge; Lo, Pechin Chien Pau; Dirksen, Asger

    2011-01-01

    A novel method for classification of abnormality in anatomical tree structures is presented. A tree is classified based on direct comparisons with other trees in a dissimilarity-based classification scheme. The pair-wise dissimilarity measure between two trees is based on a linear assignment betw...

  2. Strengthening of Concrete Structures with cement based bonded composites

    DEFF Research Database (Denmark)

    Täljsten, Björn; Blanksvärd, Thomas

    2008-01-01

    Polymers). The method is very efficient and has achieved world wide attention. However, there are some drawbacks with the use of epoxy, e.g. working environment, compatibility and permeability. Substituting the epoxy adherent with a cement based bonding agent will render a strengthening system...... with improved working environment and better compatibility to the base concrete structure. This study gives an overview of different cement based systems, all with very promising results for structural upgrading. Studied parameters are structural retrofit for bending, shear and confinement. It is concluded...

  3. Structural Health Monitoring Based on Combined Structural Global and Local Frequencies

    Directory of Open Access Journals (Sweden)

    Jilin Hou

    2014-01-01

    Full Text Available This paper presents a parameter estimation method for Structural Health Monitoring based on the combined measured structural global frequencies and structural local frequencies. First, the global test is experimented to obtain the low order modes which can reflect the global information of the structure. Secondly, the mass is added on the member of structure to increase the local dynamic characteristic and to make the member have local primary frequency, which belongs to structural local frequency and is sensitive to local parameters. Then the parameters of the structure can be optimized accurately using the combined structural global frequencies and structural local frequencies. The effectiveness and accuracy of the proposed method are verified by the experiment of a space truss.

  4. Structure-based drug design and modern medicine

    Directory of Open Access Journals (Sweden)

    Vijayakrishnan R

    2009-01-01

    Full Text Available Drug discovery has evolved through various stages into more rational and evidence-based drug designing. Compared to conventional methods which were time consuming and less logical, new drug designing based on structure is rational, evidence based, faster and more scientific in nature. In the era of modern medicine, where newer insights into molecular level of disease processes are available, it is very essential that drug designing be based on molecular mechanism of pathologic processes. Structure-based drug designing has made tremendous contributions in the field of cancer chemotherapy, drug resistant infections, neurological diseases, to mention a few. New drug discovery methods are furthered by developments in the technology especially computers, bioassay techniques and calibrated instruments. Computational structure-based drug designing opens the door to novel treatments in modern medicine.

  5. Vibration-based damage detection algorithm for WTT structures

    Science.gov (United States)

    Nguyen, Tuan-Cuong; Kim, Tae-Hwan; Choi, Sang-Hoon; Ryu, Joo-Young; Kim, Jeong-Tae

    2016-04-01

    In this paper, the integrity of a wind turbine tower (WTT) structure is nondestructively estimated using its vibration responses. Firstly, a damage detection algorithm using changes in modal characteristics to predict damage locations and severities in structures is outlined. Secondly, a finite element (FE) model based on a real WTT structure is established by using a commercial software, Midas FEA. Thirdly, forced vibration tests are performed on the FE model of the WTT structure under various damage scenarios. The changes in modal parameters such as natural frequencies and mode shapes are examined for damage monitoring in the structure. Finally, the feasibility of the vibration-based damage detection method is numerically verified by predicting locations and severities of the damage in the FE model of the WTT structure.

  6. Methods for reliability based design optimization of structural components

    OpenAIRE

    Dersjö, Tomas

    2012-01-01

    Cost and quality are key properties of a product, possibly even the two most important. Onedefinition of quality is fitness for purpose. Load-bearing products, i.e. structural components,loose their fitness for purpose if they fail. Thus, the ability to withstand failure is a fundamentalmeasure of quality for structural components. Reliability based design optimization(RBDO) is an approach for development of structural components which aims to minimizethe cost while constraining the probabili...

  7. Graph-based linear scaling electronic structure theory

    CERN Document Server

    Niklasson, Anders M N; Negre, Christian F A; Cawkwell, Marc J; Swart, Pieter J; Mohd-Yusof, Jamal; Germann, Timothy C; Wall, Michael E; Bock, Nicolas; Djidjev, Hristo

    2016-01-01

    We show how graph theory can be combined with quantum theory to calculate the electronic structure of large complex systems. The graph formalism is general and applicable to a broad range of electronic structure methods and materials, including challenging systems such as biomolecules. The methodology combines well-controlled accuracy, low computational cost, and natural low-communication parallelism. This combination addresses substantial shortcomings of linear scaling electronic structure theory, in particular with respect to quantum-based molecular dynamics simulations.

  8. Structural Optimization of Machine Gun Based on Dynamic Stability Concept

    Institute of Scientific and Technical Information of China (English)

    LI Yong-jian; WANG Rui-lin; ZHANG Ben-jun

    2008-01-01

    Improving the firing accuracy is a final goal of structural optimization of machine guns. The main factors which affect the dispersion accuracy of machine gun are analyzed. Based on the concept of dynamic stability, a structural optimization model is built up, and the sensitivity of dispersion accuracy to design variables is analyzed. The optimization results of a type of machine gun show that the method is valid, feasible, and can be used as a guide to the structural optimization of other automatic weapons.

  9. [Computational chemistry in structure-based drug design].

    Science.gov (United States)

    Cao, Ran; Li, Wei; Sun, Han-Zi; Zhou, Yu; Huang, Niu

    2013-07-01

    Today, the understanding of the sequence and structure of biologically relevant targets is growing rapidly and researchers from many disciplines, physics and computational science in particular, are making significant contributions to modern biology and drug discovery. However, it remains challenging to rationally design small molecular ligands with desired biological characteristics based on the structural information of the drug targets, which demands more accurate calculation of ligand binding free-energy. With the rapid advances in computer power and extensive efforts in algorithm development, physics-based computational chemistry approaches have played more important roles in structure-based drug design. Here we reviewed the newly developed computational chemistry methods in structure-based drug design as well as the elegant applications, including binding-site druggability assessment, large scale virtual screening of chemical database, and lead compound optimization. Importantly, here we address the current bottlenecks and propose practical solutions.

  10. Industrial Utilization of Lignin Based on its Structure and Capability

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Chemical modification and industrial utilization of lignin based on its structure were reviewed in this paper. And its economic value and significance for the society and environmental protection were also evaluated.

  11. Protein structure-based design of anti-protozoal drugs

    Directory of Open Access Journals (Sweden)

    Verlinde Christophe L. M. J.

    2002-01-01

    Full Text Available The repertory of drugs to fight protozoal diseases such as malaria, Chagas' disease, leishmaniasis, and African trypanosomiasis is woefully inadequate. Now, genome sequencing and structural genomics projects are quickly elucidating new drug targets, providing incredible opportunities for medicinal chemists. Here, we illustrate the power of structure-based drug design in this process by our efforts to selectively block trypanosomal glycolysis.

  12. Electronic and chemical properties of graphene-based structures:

    DEFF Research Database (Denmark)

    Vanin, Marco

    In the present thesis several aspects of graphene-based structures have been investigated using density functional theory calculations to solve the electronic structure problem. A review of the implementation of a localized basis-set within the projector augmented wave method - the way of describ...... are attractive candidates although issues regarding the poisoning of the active site remain to be addressed....

  13. Structured-light Image Compression Based on Fractal Theory

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The method of fractal image compression is introduced which is applied to compress the line structured-light image. Based on the self-similarity of the structured-light image, we attain satisfactory compression ratio and higher peak signal-to-noise ratio (PSNR). The experimental results indicate that this method can achieve high performance.

  14. Structure-Based Phylogenetic Analysis of the Lipocalin Superfamily.

    Directory of Open Access Journals (Sweden)

    Balasubramanian Lakshmi

    Full Text Available Lipocalins constitute a superfamily of extracellular proteins that are found in all three kingdoms of life. Although very divergent in their sequences and functions, they show remarkable similarity in 3-D structures. Lipocalins bind and transport small hydrophobic molecules. Earlier sequence-based phylogenetic studies of lipocalins highlighted that they have a long evolutionary history. However the molecular and structural basis of their functional diversity is not completely understood. The main objective of the present study is to understand functional diversity of the lipocalins using a structure-based phylogenetic approach. The present study with 39 protein domains from the lipocalin superfamily suggests that the clusters of lipocalins obtained by structure-based phylogeny correspond well with the functional diversity. The detailed analysis on each of the clusters and sub-clusters reveals that the 39 lipocalin domains cluster based on their mode of ligand binding though the clustering was performed on the basis of gross domain structure. The outliers in the phylogenetic tree are often from single member families. Also structure-based phylogenetic approach has provided pointers to assign putative function for the domains of unknown function in lipocalin family. The approach employed in the present study can be used in the future for the functional identification of new lipocalin proteins and may be extended to other protein families where members show poor sequence similarity but high structural similarity.

  15. Discrete Discriminant analysis based on tree-structured graphical models

    DEFF Research Database (Denmark)

    Perez de la Cruz, Gonzalo; Eslava, Guillermina

    The purpose of this paper is to illustrate the potential use of discriminant analysis based on tree{structured graphical models for discrete variables. This is done by comparing its empirical performance using estimated error rates for real and simulated data. The results show that discriminant...... analysis based on tree{structured graphical models is a simple nonlinear method competitive with, and sometimes superior to, other well{known linear methods like those assuming mutual independence between variables and linear logistic regression....

  16. Discrete Discriminant analysis based on tree-structured graphical models

    DEFF Research Database (Denmark)

    Perez de la Cruz, Gonzalo; Eslava, Guillermina

    The purpose of this paper is to illustrate the potential use of discriminant analysis based on tree{structured graphical models for discrete variables. This is done by comparing its empirical performance using estimated error rates for real and simulated data. The results show that discriminant a...... analysis based on tree{structured graphical models is a simple nonlinear method competitive with, and sometimes superior to, other well{known linear methods like those assuming mutual independence between variables and linear logistic regression....

  17. RNA structural motif recognition based on least-squares distance.

    Science.gov (United States)

    Shen, Ying; Wong, Hau-San; Zhang, Shaohong; Zhang, Lin

    2013-09-01

    RNA structural motifs are recurrent structural elements occurring in RNA molecules. RNA structural motif recognition aims to find RNA substructures that are similar to a query motif, and it is important for RNA structure analysis and RNA function prediction. In view of this, we propose a new method known as RNA Structural Motif Recognition based on Least-Squares distance (LS-RSMR) to effectively recognize RNA structural motifs. A test set consisting of five types of RNA structural motifs occurring in Escherichia coli ribosomal RNA is compiled by us. Experiments are conducted for recognizing these five types of motifs. The experimental results fully reveal the superiority of the proposed LS-RSMR compared with four other state-of-the-art methods.

  18. Probability based high temperature engineering creep and structural fire resistance

    CERN Document Server

    Razdolsky, Leo

    2017-01-01

    This volume on structural fire resistance is for aerospace, structural, and fire prevention engineers; architects, and educators. It bridges the gap between prescriptive- and performance-based methods and simplifies very complex and comprehensive computer analyses to the point that the structural fire resistance and high temperature creep deformations will have a simple, approximate analytical expression that can be used in structural analysis and design. The book emphasizes methods of the theory of engineering creep (stress-strain diagrams) and mathematical operations quite distinct from those of solid mechanics absent high-temperature creep deformations, in particular the classical theory of elasticity and structural engineering. Dr. Razdolsky’s previous books focused on methods of computing the ultimate structural design load to the different fire scenarios. The current work is devoted to the computing of the estimated ultimate resistance of the structure taking into account the effect of high temperatur...

  19. Crack detection in offshore platform structure based on structural intensity approach

    Science.gov (United States)

    Tian, Xiaojie; Liu, Guijie; Gao, Zhiming; Chen, Pengfei; Mu, Weilei

    2017-02-01

    Structural intensity approach is introduced to study the crack detection for offshore platform in the paper. The Line Spring Model (LSM) of surface crack is proposed based on plate crack structure, and thus the relationship between the additional angle, displacement and crack relative depth is achieved. Besides, the concept of appended structure-borne sound intensity is introduced. The expression of appended structural intensity for crack damage is derived. By observing the input energy, distribution, transmission and vibration performance of structure intensity, evidence is provided for detection of crack location. Vibration analysis is conducted on the whole platform under multi environment load. Using the structural intensity approach, the crack is detected on the key point easily. Moreover, the K-shape welded pipe point is detected using structural intensity approach, and the crack can be detected accurately. Therefore, development structural intensity approach would be extremely useful to spread out technologies that can be applied for offshore platform crack detection accurately.

  20. The latent structure of secure base script knowledge.

    Science.gov (United States)

    Waters, Theodore E A; Fraley, R Chris; Groh, Ashley M; Steele, Ryan D; Vaughn, Brian E; Bost, Kelly K; Veríssimo, Manuela; Coppola, Gabrielle; Roisman, Glenn I

    2015-06-01

    There is increasing evidence that attachment representations abstracted from childhood experiences with primary caregivers are organized as a cognitive script describing secure base use and support (i.e., the secure base script). To date, however, the latent structure of secure base script knowledge has gone unexamined-this despite that such basic information about the factor structure and distributional properties of these individual differences has important conceptual implications for our understanding of how representations of early experience are organized and generalized, as well as methodological significance in relation to maximizing statistical power and precision. In this study, we report factor and taxometric analyses that examined the latent structure of secure base script knowledge in 2 large samples. Results suggested that variation in secure base script knowledge-as measured by both the adolescent (N = 674) and adult (N = 714) versions of the Attachment Script Assessment-is generalized across relationships and continuously distributed.

  1. Base Stress of the Opened Bottom Cylinder Structures

    Institute of Scientific and Technical Information of China (English)

    刘建起; 孟晓娟

    2004-01-01

    The base stress of the opened bottom cylinder structure differs greatly from that of the structure with a closed bottom. By investigating the inner soil pressure on the cylinder wall and the base stress of the cylinder base, which were obtained from the model experiments, the interactions among the filler inside the cylinder,subsoil and cylinder are analyzed. The adjusting mechanism of frictional resistance between the inner filler and the wall of the cylinder during the overturning of the cylinder is discussed. Based on the experimental study, a method for calculating the base stress of the opened bottom cylinder structure is proposed. Meanwhile, the formulas for calculating the effective anti-overturning ratio of the opened bottom cylinder are derived.

  2. Pre-Stressing Timber-Based Plate Tensegrity Structures

    DEFF Research Database (Denmark)

    Falk, Andreas; Kirkegaard, Poul Henning

    2012-01-01

    Tensile structures occur in numerous varieties utilising combinations of tension and compression. Introducing structural plates in the basic tensegrity unit and tensegric assemblies varies the range of feasible topologies and provides the structural system with an integrated surface. The present...... paper considers the concept of plate tensegrity based on CLT plates (cross-laminated timber). It combines the principles of tensegrity with the principles of plate shells and is characterised by a plate shell stabilised by struts and cables. The paper deals with material aspects and robustness of timber......-based plate shells and outlines needs, methods and effects of controlling cable stresses for secured capacity, form and function of plate tensegrity....

  3. Structure of 2,4-Diaminopyrimidine - Theobromine Alternate Base Pairs

    Science.gov (United States)

    Gengeliczki, Zsolt; Callahan, Michael P.; Kabelac, Martin; Rijs, Anouk M.; deVries, Mattanjah S.

    2011-01-01

    We report the structure of clusters of 2,4-diaminopyrimidine with 3,7-dimethylxanthine (theobromine) in the gas phase determined by IR-UV double resonance spectroscopy in both the near-IR and mid-IR regions in combination with ab initio computations. These clusters represent potential alternate nucleobase pairs, geometrically equivalent to guanine-cytosine. We have found the four lowest energy structures, which include the Watson-Crick base pairing motif. This Watson-Crick structure has not been observed by resonant two-photon ionization (R2PI) in the gas phase for the canonical DNA base pairs.

  4. Structural and Chemical Diversity of Tl-Based Cuprate Superconductors

    Institute of Scientific and Technical Information of China (English)

    信赢

    2003-01-01

    The Tl-based cuprate superconductor family is the largest family in crystal structure and chemical composition among all high Tc cuprate superconductors. The Tl family can be divided into two sub-families, the Tl single layer family and the Tl double layer family, based on their crystal structural characteristics. The Tl single layer family is an ideal material for investigating the evolution of crystalline formation, charge carrier density, chemical composition, transport properties, superconductivity and their relationships. The Tl family contains almostall possible crystal structures discovered in high-Tc cuprate superconductors. Tl cuprate superconductors are of great importance not only in studying high-temperature superconductivity but also in commercial applications.

  5. mulPBA: an efficient multiple protein structure alignment method based on a structural alphabet.

    Science.gov (United States)

    Léonard, Sylvain; Joseph, Agnel Praveen; Srinivasan, Narayanaswamy; Gelly, Jean-Christophe; de Brevern, Alexandre G

    2014-04-01

    The increasing number of available protein structures requires efficient tools for multiple structure comparison. Indeed, multiple structural alignments are essential for the analysis of function, evolution and architecture of protein structures. For this purpose, we proposed a new web server called multiple Protein Block Alignment (mulPBA). This server implements a method based on a structural alphabet to describe the backbone conformation of a protein chain in terms of dihedral angles. This 'sequence-like' representation enables the use of powerful sequence alignment methods for primary structure comparison, followed by an iterative refinement of the structural superposition. This approach yields alignments superior to most of the rigid-body alignment methods and highly comparable with the flexible structure comparison approaches. We implement this method in a web server designed to do multiple structure superimpositions from a set of structures given by the user. Outputs are given as both sequence alignment and superposed 3D structures visualized directly by static images generated by PyMol or through a Jmol applet allowing dynamic interaction. Multiple global quality measures are given. Relatedness between structures is indicated by a distance dendogram. Superimposed structures in PDB format can be also downloaded, and the results are quickly obtained. mulPBA server can be accessed at www.dsimb.inserm.fr/dsimb_tools/mulpba/ .

  6. Protein structure prediction provides comparable performance to crystallographic structures in docking-based virtual screening.

    Science.gov (United States)

    Du, Hongying; Brender, Jeffrey R; Zhang, Jian; Zhang, Yang

    2015-01-01

    Structure based virtual screening has largely been limited to protein targets for which either an experimental structure is available or a strongly homologous template exists so that a high-resolution model can be constructed. The performance of state of the art protein structure predictions in virtual screening in systems where only weakly homologous templates are available is largely untested. Using the challenging DUD database of structural decoys, we show here that even using templates with only weak sequence homology (identity) structural models can be constructed by I-TASSER which achieve comparable enrichment rates to using the experimental bound crystal structure in the majority of the cases studied. For 65% of the targets, the I-TASSER models, which are constructed essentially in the apo conformations, reached 70% of the virtual screening performance of using the holo-crystal structures. A correlation was observed between the success of I-TASSER in modeling the global fold and local structures in the binding pockets of the proteins versus the relative success in virtual screening. The virtual screening performance can be further improved by the recognition of chemical features of the ligand compounds. These results suggest that the combination of structure-based docking and advanced protein structure modeling methods should be a valuable approach to the large-scale drug screening and discovery studies, especially for the proteins lacking crystallographic structures.

  7. Aircraft detection based on probability model of structural elements

    Science.gov (United States)

    Chen, Long; Jiang, Zhiguo

    2014-11-01

    Detecting aircrafts is important in the field of remote sensing. In past decades, researchers used various approaches to detect aircrafts based on classifiers for overall aircrafts. However, with the development of high-resolution images, the internal structures of aircrafts should also be taken into consideration now. To address this issue, a novel aircrafts detection method for satellite images based on probabilistic topic model is presented. We model aircrafts as the connected structural elements rather than features. The proposed method contains two major steps: 1) Use Cascade-Adaboost classier to identify the structural elements of aircraft firstly. 2) Connect these structural elements to aircrafts, where the relationships between elements are estimated by hierarchical topic model. The model places strict spatial constraints on structural elements which can identify differences between similar features. The experimental results demonstrate the effectiveness of the approach.

  8. Evaluation Method of Web Site Based on Web Structure Mining

    Institute of Scientific and Technical Information of China (English)

    LiJun-e; ZhouDong-ru

    2003-01-01

    The structure of Web site became more complex than before. During the design period of a Web site, the lack of model and method results in improper Web structure,which depend on the designer's experience. From the point of view of software engineering, every period in the software life must be evaluated before starting the next period's work. It is very important and essential to search relevant methods for evaluating Web structure before the site is completed. In this work, after studying the related work about the Web structure mining and analyzing the major structure mining methods (Page-rank and Hub/Authority), a method based on the Page-rank for Web structure evaluation in design stage is proposed. A Web structure modeling language WSML is designed, and the implement strategies for evaluating system of the Web site structure are given out. Web structure mining has being used mainly in search engines before. It is the first time to employ the Web structure mining technology to evaluate a Web structure in the design period of a Web site. It contributes to the formalization of the design documents for Web site and the improving of software engineering for large scale Web site, and the evaluating system is a practical tool for Web site construction.

  9. Towards fully automated structure-based function prediction in structural genomics: a case study.

    Science.gov (United States)

    Watson, James D; Sanderson, Steve; Ezersky, Alexandra; Savchenko, Alexei; Edwards, Aled; Orengo, Christine; Joachimiak, Andrzej; Laskowski, Roman A; Thornton, Janet M

    2007-04-13

    As the global Structural Genomics projects have picked up pace, the number of structures annotated in the Protein Data Bank as hypothetical protein or unknown function has grown significantly. A major challenge now involves the development of computational methods to assign functions to these proteins accurately and automatically. As part of the Midwest Center for Structural Genomics (MCSG) we have developed a fully automated functional analysis server, ProFunc, which performs a battery of analyses on a submitted structure. The analyses combine a number of sequence-based and structure-based methods to identify functional clues. After the first stage of the Protein Structure Initiative (PSI), we review the success of the pipeline and the importance of structure-based function prediction. As a dataset, we have chosen all structures solved by the MCSG during the 5 years of the first PSI. Our analysis suggests that two of the structure-based methods are particularly successful and provide examples of local similarity that is difficult to identify using current sequence-based methods. No one method is successful in all cases, so, through the use of a number of complementary sequence and structural approaches, the ProFunc server increases the chances that at least one method will find a significant hit that can help elucidate function. Manual assessment of the results is a time-consuming process and subject to individual interpretation and human error. We present a method based on the Gene Ontology (GO) schema using GO-slims that can allow the automated assessment of hits with a success rate approaching that of expert manual assessment.

  10. Inferential protein structure determination and refinement using fast, electronic structure based backbone amide chemical shift predictions

    CERN Document Server

    Christensen, Anders S

    2015-01-01

    This report covers the development of a new, fast method for calculating the backbone amide proton chemical shifts in proteins. Through quantum chemical calculations, structure-based forudsiglese the chemical shift for amidprotonen in protein has been parameterized. The parameters are then implemented in a computer program called Padawan. The program has since been implemented in protein folding program Phaistos, wherein the method andvendes to de novo folding of the protein structures and to refine the existing protein structures.

  11. Health monitoring of aeronautical structures based on vibrations measurements

    Science.gov (United States)

    Bovio, Igor; Lecce, Leonardo

    2006-03-01

    Purpose of the paper is to present an innovative application inside the Non Destructive Testing field based on vibrations measurements, developed by the authors during the last three years, and already tested for analysing damage of many structural elements. The proposed new method is based on the acquisition and comparison of Frequency Response Functions (FRFs) of the monitored structure before and after an occurred damage. Structural damage modify the dynamical behaviour of the structure such as mass, stiffened and damping, and consequently the FRFs of the damaged structure in comparison with the FRFs of the sound structure, making possible to identify, to localize and quantify a structural damage. The activities, presented in the paper, mostly focused on a new FRFs processing technique based on the determining of a representative "Damage Index" for identifying and analysing damage both on real scale aeronautical structural components, like large-scale fuselage reinforced panels, and on aeronautical composite panels. Besides it has been carried out a dedicated neural network algorithm aiming at obtaining a "recognition-based learning"; this kind of learning methodology permits to train the neural network in order to let it recognises only "positive" examples discarding as a consequence the "negative" ones. Within the structural NDT a "positive" example means "healthy" state of the analysed structural component and, obviously, a "negative" one means a "damaged" or perturbed state. From an architectural point of view piezoceramic patches have been tested as actuators and sensors. Besides it has been used a laser-scanning vibrometer system to validate the behaviour of the piezoceramic patches.

  12. Dynamic fracture modeling in shell structures based on XFEM

    NARCIS (Netherlands)

    Larsson, R.; Mediavilla, J.; Fagerström, M.

    2011-01-01

    Through-the-thickness crack propagation in thin-walled structures is dealt with in this paper. The formulation is based on the cohesive zone concept applied to a kinematically consistent shell model enhanced with an XFEM-based discontinuous kinematical representation. The resulting formulation compr

  13. Spectral analysis based on compressive sensing in nanophotonic structures.

    Science.gov (United States)

    Wang, Zhu; Yu, Zongfu

    2014-10-20

    A method of spectral sensing based on compressive sensing is shown to have the potential to achieve high resolution in a compact device size. The random bases used in compressive sensing are created by the optical response of a set of different nanophotonic structures, such as photonic crystal slabs. The complex interferences in these nanostructures offer diverse spectral features suitable for compressive sensing.

  14. Design and manufacturing of bio-based sandwich structures

    CSIR Research Space (South Africa)

    John, Maya J

    2017-03-01

    Full Text Available The aim of this chapter is to discuss the design and manufacturing of bio-based sandwich structures. As the economic advantages of weight reduction have become mandatory for many advanced industries, bio-based sandwich panels have emerged...

  15. Photo-excited terahertz switch based on composite metamaterial structure

    Science.gov (United States)

    Wang, Guocui; Zhang, Jianna; Zhang, Bo; He, Ting; He, Yanan; Shen, Jingling

    2016-09-01

    A photo-excited terahertz switch based on a composite metamaterial structure was designed by integration of photoconductive silicon into the gaps of split-ring resonators. The conductivity of the silicon that was used to fill the gaps in the split-ring resonators was tuned dynamically as a function of the incident pump power using laser excitation, leading to a change in the composite metamaterial structure's properties. We studied the transmission characteristics of the composite metamaterial structure for various silicon conductivities, and the results indicated that this type of composite metamaterial structure could be used as a resonance frequency tunable terahertz metamaterial switch. We also designed other structures by filling different gaps with silicon, and proved that these structures could be used as terahertz metamaterial switches can change the working mode from a single frequency to multiple frequencies.

  16. Extended Kalman filter based structural damage detection for MR damper controlled structures

    Science.gov (United States)

    Jin, Chenhao; Jang, Shinae; Sun, Xiaorong; Jiang, Zhaoshuo; Christenson, Richard

    2016-04-01

    The Magneto-rheological (MR) dampers have been widely used in many building and bridge structures against earthquake and wind loadings due to its advantages including mechanical simplicity, high dynamic range, low power requirements, large force capacity, and robustness. However, research about structural damage detection methods for MR damper controlled structures is limited. This paper aims to develop a real-time structural damage detection method for MR damper controlled structures. A novel state space model of MR damper controlled structure is first built by combining the structure's equation of motion and MR damper's hyperbolic tangent model. In this way, the state parameters of both the structure and MR damper are added in the state vector of the state space model. Extended Kalman filter is then used to provide prediction for state variables from measurement data. The two techniques are synergistically combined to identify parameters and track the changes of both structure and MR damper in real time. The proposed method is tested using response data of a three-floor MR damper controlled linear building structure under earthquake excitation. The testing results show that the adaptive extended Kalman filter based approach is capable to estimate not only structural parameters such as stiffness and damping of each floor, but also the parameters of MR damper, so that more insights and understanding of the damage can be obtained. The developed method also demonstrates high damage detection accuracy and light computation, as well as the potential to implement in a structural health monitoring system.

  17. Earthquake Damage Assessment for RC Structures Based on Fuzzy Sets

    Directory of Open Access Journals (Sweden)

    Haoxiang He

    2013-01-01

    Full Text Available A global damage index based on multiple linear force-deformation curves in pushover analysis is presented to evaluate the integrated damage of reinforced concrete structure. The modified coefficient is provided considering the cyclic load and hysteresis energy. The number of inelastic cycles and the coefficient of hysteresis energy concentration are also introduced as damage indices. Hence, multiple damage indices about displacement and energy for performance-based design are considered. The relation of multiple damage indices or factors and the fuzzy damage set is presented by comprehensive fuzzy evaluation; hence, a performance-based multiple fuzzy seismic damage-assessment method for reinforced concrete frame structures is established. The method can be accomplished based on pushover analysis, code spectrum, and capacity spectrum method. The fuzzy seismic damage-assessment method is verified through nonlinear analysis four different structures and the corresponding results and assessment conclusions are accurate.

  18. Chemical and structural effects of base modifications in messenger RNA

    Science.gov (United States)

    Harcourt, Emily M.; Kietrys, Anna M.; Kool, Eric T.

    2017-01-01

    A growing number of nucleobase modifications in messenger RNA have been revealed through advances in detection and RNA sequencing. Although some of the biochemical pathways that involve modified bases have been identified, research into the world of RNA modification -- the epitranscriptome -- is still in an early phase. A variety of chemical tools are being used to characterize base modifications, and the structural effects of known base modifications on RNA pairing, thermodynamics and folding are being determined in relation to their putative biological roles.

  19. Microstructure and structural phase transitions in iron-based superconductors

    Institute of Scientific and Technical Information of China (English)

    Wang Zhen; Cai Yao; Yang Huai-Xin; Tian Huan-Fang; Wang Zhi-Wei; Ma Chao; Chen Zhen

    2013-01-01

    Crystal structures and microstructural features,such as structural phase transitions,defect structures,and chemical and structural inhomogeneities,are known to have profound effects on the physical properties of superconducting materials.Recently,many studies on the structural properties of Fe-based high-Tc superconductors have been published.This review article will mainly focus on the typical microstructural features in samples that have been well characterized by physical measurements.(i) Certain common structural features are discussed,in particular,the crystal structural features for different superconducting families,the local structural distortions in the Fe2Pn2 (Pn =P,As,Sb) or Fe2Ch2 (Ch =S,Se,Te) blocks,and the structural transformations in the 122 system.(ii) In FeTe(Se) (11 family),the superconductivity,chemical and structural inhomogeneities are investigated and discussed in correlation with superconductivity.(iii) In the K0.8Fe1.6+xSe2 system,we focus on the typical compounds with emphasis on the Fe-vacancy order and phase separations.The microstructural features in other superconducting materials are also briefly discussed.

  20. Structure-based classification and ontology in chemistry

    Directory of Open Access Journals (Sweden)

    Hastings Janna

    2012-04-01

    Full Text Available Abstract Background Recent years have seen an explosion in the availability of data in the chemistry domain. With this information explosion, however, retrieving relevant results from the available information, and organising those results, become even harder problems. Computational processing is essential to filter and organise the available resources so as to better facilitate the work of scientists. Ontologies encode expert domain knowledge in a hierarchically organised machine-processable format. One such ontology for the chemical domain is ChEBI. ChEBI provides a classification of chemicals based on their structural features and a role or activity-based classification. An example of a structure-based class is 'pentacyclic compound' (compounds containing five-ring structures, while an example of a role-based class is 'analgesic', since many different chemicals can act as analgesics without sharing structural features. Structure-based classification in chemistry exploits elegant regularities and symmetries in the underlying chemical domain. As yet, there has been neither a systematic analysis of the types of structural classification in use in chemistry nor a comparison to the capabilities of available technologies. Results We analyze the different categories of structural classes in chemistry, presenting a list of patterns for features found in class definitions. We compare these patterns of class definition to tools which allow for automation of hierarchy construction within cheminformatics and within logic-based ontology technology, going into detail in the latter case with respect to the expressive capabilities of the Web Ontology Language and recent extensions for modelling structured objects. Finally we discuss the relationships and interactions between cheminformatics approaches and logic-based approaches. Conclusion Systems that perform intelligent reasoning tasks on chemistry data require a diverse set of underlying computational

  1. Structure-based classification and ontology in chemistry.

    Science.gov (United States)

    Hastings, Janna; Magka, Despoina; Batchelor, Colin; Duan, Lian; Stevens, Robert; Ennis, Marcus; Steinbeck, Christoph

    2012-04-05

    Recent years have seen an explosion in the availability of data in the chemistry domain. With this information explosion, however, retrieving relevant results from the available information, and organising those results, become even harder problems. Computational processing is essential to filter and organise the available resources so as to better facilitate the work of scientists. Ontologies encode expert domain knowledge in a hierarchically organised machine-processable format. One such ontology for the chemical domain is ChEBI. ChEBI provides a classification of chemicals based on their structural features and a role or activity-based classification. An example of a structure-based class is 'pentacyclic compound' (compounds containing five-ring structures), while an example of a role-based class is 'analgesic', since many different chemicals can act as analgesics without sharing structural features. Structure-based classification in chemistry exploits elegant regularities and symmetries in the underlying chemical domain. As yet, there has been neither a systematic analysis of the types of structural classification in use in chemistry nor a comparison to the capabilities of available technologies. We analyze the different categories of structural classes in chemistry, presenting a list of patterns for features found in class definitions. We compare these patterns of class definition to tools which allow for automation of hierarchy construction within cheminformatics and within logic-based ontology technology, going into detail in the latter case with respect to the expressive capabilities of the Web Ontology Language and recent extensions for modelling structured objects. Finally we discuss the relationships and interactions between cheminformatics approaches and logic-based approaches. Systems that perform intelligent reasoning tasks on chemistry data require a diverse set of underlying computational utilities including algorithmic, statistical and logic-based

  2. Structure-based druggability assessment of the mammalian structural proteome with inclusion of light protein flexibility.

    Directory of Open Access Journals (Sweden)

    Kathryn A Loving

    2014-07-01

    Full Text Available Advances reported over the last few years and the increasing availability of protein crystal structure data have greatly improved structure-based druggability approaches. However, in practice, nearly all druggability estimation methods are applied to protein crystal structures as rigid proteins, with protein flexibility often not directly addressed. The inclusion of protein flexibility is important in correctly identifying the druggability of pockets that would be missed by methods based solely on the rigid crystal structure. These include cryptic pockets and flexible pockets often found at protein-protein interaction interfaces. Here, we apply an approach that uses protein modeling in concert with druggability estimation to account for light protein backbone movement and protein side-chain flexibility in protein binding sites. We assess the advantages and limitations of this approach on widely-used protein druggability sets. Applying the approach to all mammalian protein crystal structures in the PDB results in identification of 69 proteins with potential druggable cryptic pockets.

  3. A Component-Based Debugging Approach for Detecting Structural Inconsistencies in Declarative Equation Based Models

    Institute of Scientific and Technical Information of China (English)

    Jian-Wan Ding; Li-Ping Chen; Fan-Li Zhou

    2006-01-01

    Object-oriented modeling with declarative equation based languages often unconsciously leads to structural inconsistencies. Component-based debugging is a new structural analysis approach that addresses this problem by analyzing the structure of each component in a model to separately locate faulty components. The analysis procedure is performed recursively based on the depth-first rule. It first generates fictitious equations for a component to establish a debugging environment, and then detects structural defects by using graph theoretical approaches to analyzing the structure of the system of equations resulting from the component. The proposed method can automatically locate components that cause the structural inconsistencies, and show the user detailed error messages. This information can be a great help in finding and localizing structural inconsistencies, and in some cases pinpoints them immediately.

  4. Hard and soft acids and bases: structure and process.

    Science.gov (United States)

    Reed, James L

    2012-07-05

    Under investigation is the structure and process that gives rise to hard-soft behavior in simple anionic atomic bases. That for simple atomic bases the chemical hardness is expected to be the only extrinsic component of acid-base strength, has been substantiated in the current study. A thermochemically based operational scale of chemical hardness was used to identify the structure within anionic atomic bases that is responsible for chemical hardness. The base's responding electrons have been identified as the structure, and the relaxation that occurs during charge transfer has been identified as the process giving rise to hard-soft behavior. This is in contrast the commonly accepted explanations that attribute hard-soft behavior to varying degrees of electrostatic and covalent contributions to the acid-base interaction. The ability of the atomic ion's responding electrons to cause hard-soft behavior has been assessed by examining the correlation of the estimated relaxation energies of the responding electrons with the operational chemical hardness. It has been demonstrated that the responding electrons are able to give rise to hard-soft behavior in simple anionic bases.

  5. Structural Identification and Monitoring based on Uncertain/Limited Information

    Directory of Open Access Journals (Sweden)

    Chatzi Eleni N.

    2015-01-01

    Full Text Available The goal of the present study is to propose a structural identification framework able to exploit both vibrational response and operational condition information in extracting structural models, able to represent the systemspecific structural behavior in its complete operational spectrum. In doing so, a scheme need be derived for the extraction of salient features, which are indicative of structural condition. Such a scheme should account for variations attributed to operational effects, such as environmental and operational load variations, and which likely lie within regular structural condition bounds, versus variations which indicate short- or long-term damage effects. The latter may be achieved via coupling of sparse, yet diverse, monitoring information with appropriate stochastic tools, able to infer the underlying dependences between the monitored input and output data. This in turn allows for extraction of quantities, or features, relating to structural condition, which may further be utilized as performance indicators. The computational tool developed herein for realizing such a framework, termed the PCE-ICA scheme, is based on the use of Polynomial Chaos Expansion (PCE tool, along with an Independent Component Analysis (ICA algorithm. The benefits of additionally fusing a data-driven system model will further be discussed for the case of complex structural response. The method is assessed via implementation on field data acquired from diverse structural systems, namely a benchmark bridge case study and a wind turbine tower structure, revealing a robust condition assessment tool.

  6. Research on Web-Based Product Structure and Configuration Management

    Institute of Scientific and Technical Information of China (English)

    CHENJi-zhong; TIANLing; XUXiao-hui

    2004-01-01

    An enhanced system architecture of Web-based product structure and configuration management system along with its, functions are is presented. The key techniques, such as construction of object models of product structure and product configuration, hybrid approach method in product configuration management, sharing and integration of heterogeneous product data, integration with other sub-systems, are discussed too. A prototype system is developed by J2EE technology.

  7. An RNA secondary structure prediction method based on minimum and suboptimal free energy structures.

    Science.gov (United States)

    Fu, Haoyue; Yang, Lianping; Zhang, Xiangde

    2015-09-07

    The function of an RNA-molecule is mainly determined by its tertiary structures. And its secondary structure is an important determinant of its tertiary structure. The comparative methods usually give better results than the single-sequence methods. Based on minimum and suboptimal free energy structures, the paper presents a novel method for predicting conserved secondary structure of a group of related RNAs. In the method, the information from the known RNA structures is used as training data in a SVM (Support Vector Machine) classifier. Our method has been tested on the benchmark dataset given by Puton et al. The results show that the average sensitivity of our method is higher than that of other comparative methods such as CentroidAlifold, MXScrana, RNAalifold, and TurboFold.

  8. Gradient-based adaptation of continuous dynamic model structures

    Science.gov (United States)

    La Cava, William G.; Danai, Kourosh

    2016-01-01

    A gradient-based method of symbolic adaptation is introduced for a class of continuous dynamic models. The proposed model structure adaptation method starts with the first-principles model of the system and adapts its structure after adjusting its individual components in symbolic form. A key contribution of this work is its introduction of the model's parameter sensitivity as the measure of symbolic changes to the model. This measure, which is essential to defining the structural sensitivity of the model, not only accommodates algebraic evaluation of candidate models in lieu of more computationally expensive simulation-based evaluation, but also makes possible the implementation of gradient-based optimisation in symbolic adaptation. The proposed method is applied to models of several virtual and real-world systems that demonstrate its potential utility.

  9. Symmetric metamaterials based on flower-shaped structure

    Energy Technology Data Exchange (ETDEWEB)

    Tuong, P.V. [Department of Physics, Quantum Photonic Science Research Center and Research Institute for Nature Sciences, Hanyang University, Seoul 133-791 (Korea, Republic of); Institute of Material Sciences, Vietnam Academy of Science and Technology, Hanoi (Viet Nam); Park, J.W. [Department of Physics, Quantum Photonic Science Research Center and Research Institute for Nature Sciences, Hanyang University, Seoul 133-791 (Korea, Republic of); Rhee, J.Y. [Sungkyunkwan University, Suwon (Korea, Republic of); Kim, K.W. [Sunmoon University, Asan (Korea, Republic of); Cheong, H. [Sogang University, Seoul (Korea, Republic of); Jang, W.H. [Electromagnetic Wave Institute, Korea Radio Promotion Association, Seoul (Korea, Republic of); Lee, Y.P., E-mail: yplee@hanyang.ac.kr [Department of Physics, Quantum Photonic Science Research Center and Research Institute for Nature Sciences, Hanyang University, Seoul 133-791 (Korea, Republic of)

    2013-08-15

    We proposed new models of metamaterials (MMs) based on a flower-shaped structure (FSS), whose “meta-atoms” consist of two flower-shaped metallic parts separated by a dielectric layer. Like the non-symmetric MMs based on cut-wire-pairs or electric ring resonators, the symmetrical FSS demonstrates the negative permeability at GHz frequencies. Employing the results, we designed a symmetric negative-refractive-index MM [a symmetric combined structure (SCS)], which is composed of FSSs and cross continuous wires. The MM properties of the FSS and the SCS are presented numerically and experimentally. - Highlights: • A new designed of sub-wavelength metamaterial, flower-shaped structure was proposed. • Flower-shaped meta-atom illustrated effective negative permeability. • Based on the meta-atom, negative refractive index was conventionally gained. • Negative refractive index was demonstrated with symmetric properties for electromagnetic wave. • Dimensional parameters were studied under normal electromagnetic wave.

  10. A wavelength demultiplexing structure based on graphene nanoribbon resonators

    Science.gov (United States)

    Zhuang, Huawei; Sheng, Shiwei; Kong, Fanmin; Li, Kang; Wang, Yuling

    2016-12-01

    A wavelength demultiplexing (WDM) structure based on graphene nanoribbon resonators is proposed and numerically investigated by the finite-difference time-domain (FDTD) method. The demultiplexing wavelength can be easily derived by adjusting the length of the resonator, which is accurately explained by the Fabry-Perot (F-P) resonant theory. Meanwhile, the transmission characteristics of the WDM structure are influenced by the coupling distance between the resonator and drop/bus waveguides, and the performance of the WDM device is analyzed at different nanoribbon width and chemical potential. In addition, in order to improve the transmission efficiency from the drop waveguide, a reflection structure is introduced at the end of the bus waveguide. The exact mechanism for the WDM structure is analyzed in detail using the temporal coupled-mode theory. The proposed structure will have potential applications in the field of ultra-compact WDM systems in highly integrated optical circuits.

  11. Integrated Reliability-Based Optimal Design of Structures

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Thoft-Christensen, Palle

    1987-01-01

    the reliability decreases with time it is often necessary to design an inspection and repair programme. For example the reliability of offshore steel structures decreases with time due to corrosion and development of fatigue cracks. Until now most inspection and repair strategies are based on experience rather......In conventional optimal design of structural systems the weight or the initial cost of the structure is usually used as objective function. Further, the constraints require that the stresses and/or strains at some critical points have to be less than some given values. Finally, all variables...... and parameters are assumed to be deterministic quantities. In this paper a probabilistic formulation is used. Some of the quantities specifying the load and the strength of the structure are modelled as random variables, and the constraints specify that the reliability of the structure has to exceed some given...

  12. Vortical Structures in CT-based Breathing Lung Models

    Science.gov (United States)

    Choi, Jiwoong; Lee, Changhyun; Hoffman, Eric; Lin, Ching-Long

    2016-11-01

    The 1D-3D coupled computational fluid dynamics (CFD) lung model is applied to study vortical structures in the human airways during normal breathing cycles. During inhalation, small vortical structures form around the turbulent laryngeal jet and Taylor-Gőrtler-like vortices form near the curved walls in the supraglottal region and at airway bifurcations. On exhalation elongated vortical tubes are formed in the left main bronchus, whereas a relatively slower stream is observed in the right main bronchus. These structures result in helical motions in the trachea, producing long lasting high wall shear stress on the wall. The current study elucidates that the correct employment of image-based airway deformation and lung deflation information is crucial for capturing the physiologically consistent regional airflow structures. The pathophysiological implications of these structures in destruction of tracheal wall will be discussed.

  13. SVM-based method for protein structural class prediction using secondary structural content and structural information of amino acids.

    Science.gov (United States)

    Mohammad, Tabrez Anwar Shamim; Nagarajaram, Hampapathalu Adimurthy

    2011-08-01

    The knowledge collated from the known protein structures has revealed that the proteins are usually folded into the four structural classes: all-α, all-β, α/β and α + β. A number of methods have been proposed to predict the protein's structural class from its primary structure; however, it has been observed that these methods fail or perform poorly in the cases of distantly related sequences. In this paper, we propose a new method for protein structural class prediction using low homology (twilight-zone) protein sequences dataset. Since protein structural class prediction is a typical classification problem, we have developed a Support Vector Machine (SVM)-based method for protein structural class prediction that uses features derived from the predicted secondary structure and predicted burial information of amino acid residues. The examination of different individual as well as feature combinations revealed that the combination of secondary structural content, secondary structural and solvent accessibility state frequencies of amino acids gave rise to the best leave-one-out cross-validation accuracy of ~81% which is comparable to the best accuracy reported in the literature so far.

  14. Structure based design of 11β-HSD1 inhibitors.

    Science.gov (United States)

    Singh, Suresh; Tice, Colin

    2010-11-01

    Controlling elevated tissue-specific levels of cortisol may provide a novel therapeutic approach for treating metabolic syndrome. This concept has spurred large scale medicinal chemistry efforts in the pharmaceutical industry for the design of 11β-HSD1 inhibitors. High resolution X-ray crystal structures of inhibitors in complex with the enzyme have facilitated the structure-based design of diverse classes of molecules. A summary of binding modes, trends in structure-activity relationships, and the pharmacodynamic data of inhibitors from each class is presented.

  15. Optical-based smart structures for tamper-indicating applications

    Energy Technology Data Exchange (ETDEWEB)

    Sliva, P.; Anheier, N.C.; Simmons, K.L.; Undem, H.A.

    1996-11-01

    This report is a compilation of several related projects performed from 1991 through 1996 concerning the design, construction, and application of optical-based smart structure to tamper-indicating and sensing secure containers. Due to several influences, the projects were carried through to varying degrees of completion. Cancellation of the overall project at the client level motivated the authors to gather all of the technology and ideas about smart structures developed during these several projects, whether completed or just conceptualized, into one document. Although each section individually discusses a specific project, the overall document is written chronologically with each successive section showing how increased smart structure complexity was integrated into the container.

  16. A Sign-Based Phrase Structure Grammar for Turkish

    CERN Document Server

    Sehitoglu, O T

    1996-01-01

    This study analyses Turkish syntax from an informational point of view. Sign based linguistic representation and principles of HPSG (Head-driven Phrase Structure Grammar) theory are adapted to Turkish. The basic informational elements are nested and inherently sorted feature structures called signs. In the implementation, logic programming tool ALE (Attribute Logic Engine) which is primarily designed for implementing HPSG grammars is used. A type and structure hierarchy of Turkish language is designed. Syntactic phenomena such a s subcategorization, relative clauses, constituent order variation, adjuncts, nomina l predicates and complement-modifier relations in Turkish are analyzed. A parser is designed and implemented in ALE.

  17. Structure-based coarse-graining in liquid slabs.

    Science.gov (United States)

    Jochum, Mara; Andrienko, Denis; Kremer, Kurt; Peter, Christine

    2012-08-14

    Structure-based coarse-graining relies on matching the pair correlation functions of a reference (atomistic) and a coarse-grained system. As such, it is designed for systems with uniform density distributions. Here, we demonstrate how it can be generalized for inhomogeneous systems by coarse-graining slabs of liquid water and methanol in vacuum, as well as a single benzene molecule at the water-vacuum interface. Our conclusion is that coarse-graining performed in inhomogeneous systems improves thermodynamic properties and the structure of interfaces without significant alterations to the local structure of the bulk liquid.

  18. On structure-based priors in Bayesian geophysical inversion

    Science.gov (United States)

    de Pasquale, G.; Linde, N.

    2017-03-01

    Bayesian methods are extensively used to analyse geophysical data sets. A critical and somewhat overlooked component of high-dimensional Bayesian inversion is the definition of the prior probability density function that describes the joint probability of model parameters before considering available data sets. If insufficient prior information is available about model parameter correlations, then it is tempting to assume that model parameters are uncorrelated. When working with a spatially gridded model representation, this overparametrization leads to posterior realizations with far too much variability to be deemed realistic from a geological perspective. In this study, we introduce a new approach for structure-based prior sampling with Markov chain Monte Carlo that is suitable when only limited prior information is available. We evaluate our method using model structure measures related to standard roughness and damping metrics for l1- and l2-norms. We show that our structure-based prior approach is able to adequately sample the chosen prior distribution of model structure. The usefulness and applicability of the methodology is demonstrated on synthetic and field-based crosshole ground penetrating radar data. We find that our method provides posterior model realizations and statistics that are significantly more satisfactory than those based on underlying assumptions of uncorrelated model parameters or on explicit penalties on model structure within an empirical Bayes framework.

  19. Distance matrix-based approach to protein structure prediction.

    Science.gov (United States)

    Kloczkowski, Andrzej; Jernigan, Robert L; Wu, Zhijun; Song, Guang; Yang, Lei; Kolinski, Andrzej; Pokarowski, Piotr

    2009-03-01

    Much structural information is encoded in the internal distances; a distance matrix-based approach can be used to predict protein structure and dynamics, and for structural refinement. Our approach is based on the square distance matrix D = [r(ij)(2)] containing all square distances between residues in proteins. This distance matrix contains more information than the contact matrix C, that has elements of either 0 or 1 depending on whether the distance r (ij) is greater or less than a cutoff value r (cutoff). We have performed spectral decomposition of the distance matrices D = sigma lambda(k)V(k)V(kT), in terms of eigenvalues lambda kappa and the corresponding eigenvectors v kappa and found that it contains at most five nonzero terms. A dominant eigenvector is proportional to r (2)--the square distance of points from the center of mass, with the next three being the principal components of the system of points. By predicting r (2) from the sequence we can approximate a distance matrix of a protein with an expected RMSD value of about 7.3 A, and by combining it with the prediction of the first principal component we can improve this approximation to 4.0 A. We can also explain the role of hydrophobic interactions for the protein structure, because r is highly correlated with the hydrophobic profile of the sequence. Moreover, r is highly correlated with several sequence profiles which are useful in protein structure prediction, such as contact number, the residue-wise contact order (RWCO) or mean square fluctuations (i.e. crystallographic temperature factors). We have also shown that the next three components are related to spatial directionality of the secondary structure elements, and they may be also predicted from the sequence, improving overall structure prediction. We have also shown that the large number of available HIV-1 protease structures provides a remarkable sampling of conformations, which can be viewed as direct structural information about the

  20. Evaluation Method of Web Site Structure Based on Web Structure Mining

    Institute of Scientific and Technical Information of China (English)

    Li Jun-e; Zhou Dong-ru

    2003-01-01

    The structure of Web site hecarne more complex titan before. During the design period of a Web site, the lack of model and method results in improper Web structure,which depend on the designer's experience. From the point of view of software engineering, every period in the software life must be evaluated before starting the next period's work. It is very important and essential to search relevant methods for evaluating Web structure before the site is completed. In this work, after studying the related work about the Web struc lure mining and analyzing the major structure mining methods (Page-rank and Hub/Authority), a method based on the Page-rank for Web structure evaluation in design stage is proposecL A Web structure modeling language WSML is designed, and the implement strategies for evaluating system of the Web site structure are given out. Web structure mining has being used mainly in search engines before. It is the first time to employ the Web structure mining technology to evaluate a Web structure in the design period of a Web site. It contributes to the formalization of the design documents for Web site and the improving of software engineering for large scale Web site, and the evaluating system is a practical tool for Web site construction.

  1. Structure-Based Search for New Inhibitors of Cholinesterases

    Directory of Open Access Journals (Sweden)

    Barbara Malawska

    2013-03-01

    Full Text Available Cholinesterases are important biological targets responsible for regulation of cholinergic transmission, and their inhibitors are used for the treatment of Alzheimer’s disease. To design new cholinesterase inhibitors, of different structure-based design strategies was followed, including the modification of compounds from a previously developed library and a fragment-based design approach. This led to the selection of heterodimeric structures as potential inhibitors. Synthesis and biological evaluation of selected candidates confirmed that the designed compounds were acetylcholinesterase inhibitors with IC50 values in the mid-nanomolar to low micromolar range, and some of them were also butyrylcholinesterase inhibitors.

  2. Reliability-Based Structural Optimization of Wave Energy Converters

    DEFF Research Database (Denmark)

    Ambühl, Simon; Kramer, Morten; Sørensen, John Dalsgaard

    2014-01-01

    More and more wave energy converter (WEC) concepts are reaching prototype level. Once the prototype level is reached, the next step in order to further decrease the levelized cost of energy (LCOE) is optimizing the overall system with a focus on structural and maintenance (inspection) costs......, as well as on the harvested power from the waves. The target of a fully-developed WEC technology is not maximizing its power output, but minimizing the resulting LCOE. This paper presents a methodology to optimize the structural design of WECs based on a reliability-based optimization problem...

  3. Porous structures based on nanopolysaccharides for medical applications

    OpenAIRE

    2014-01-01

    Recently, the use of bio-based nanomaterials has attracted much interest in medical applications due to their cytocompatibility, good moisture stability, good mechanical properties, hydrophilic surfaces and their ability to form porous structures. The aim of this work is to develop porous nanocomposites based on nanochitin and nanocellulose with controlled pore size and porosity in order to facilitate cell growth and interconnectivity and to investigate their potential in wound dressing and c...

  4. Structure-based design of combinatorial mutagenesis libraries.

    Science.gov (United States)

    Verma, Deeptak; Grigoryan, Gevorg; Bailey-Kellogg, Chris

    2015-05-01

    The development of protein variants with improved properties (thermostability, binding affinity, catalytic activity, etc.) has greatly benefited from the application of high-throughput screens evaluating large, diverse combinatorial libraries. At the same time, since only a very limited portion of sequence space can be experimentally constructed and tested, an attractive possibility is to use computational protein design to focus libraries on a productive portion of the space. We present a general-purpose method, called "Structure-based Optimization of Combinatorial Mutagenesis" (SOCoM), which can optimize arbitrarily large combinatorial mutagenesis libraries directly based on structural energies of their constituents. SOCoM chooses both positions and substitutions, employing a combinatorial optimization framework based on library-averaged energy potentials in order to avoid explicitly modeling every variant in every possible library. In case study applications to green fluorescent protein, β-lactamase, and lipase A, SOCoM optimizes relatively small, focused libraries whose variants achieve energies comparable to or better than previous library design efforts, as well as larger libraries (previously not designable by structure-based methods) whose variants cover greater diversity while still maintaining substantially better energies than would be achieved by representative random library approaches. By allowing the creation of large-scale combinatorial libraries based on structural calculations, SOCoM promises to increase the scope of applicability of computational protein design and improve the hit rate of discovering beneficial variants. While designs presented here focus on variant stability (predicted by total energy), SOCoM can readily incorporate other structure-based assessments, such as the energy gap between alternative conformational or bound states.

  5. Density-Based and Transport-Based Core-Periphery Structures in Networks

    CERN Document Server

    Lee, Sang Hoon; Porter, Mason A

    2013-01-01

    Networks often possess mesoscale structures, and studying them can yield insights into both structure and function. It is most common to study community structure, but numerous other types of mesoscale structures also exist. In this paper, we examine core-periphery structures based on both density and transportation. In such structures, core network components are well-connected both among themselves and to peripheral components, which are not well-connected to anything. We examine core-periphery structures in a wide range of examples of transportation, social, and financial networks---including road networks in large urban areas, a rabbit warren, a dolphin social network, a European interbank network, and a migration network between counties in the United States. We illustrate that a recently developed transport-based notion of node coreness is very useful for characterizing transportation networks. We also generalize this notion to examine core versus peripheral edges, and we show that this new diagnostic i...

  6. Tunable, omnidirectional structural color on reflection based on metal-SiOx-metal structure

    Science.gov (United States)

    Yang, Chenying; Mao, Kening; Shen, Weidong; Fang, Bo; Fang, Xu; Zhang, Xing; Zhang, Yueguang; Liu, Xu

    2016-12-01

    An omnidirectional structural color based on the metal-SiOx-metal stack structure is proposed, which can present the same perceived color for a broad range of incidence angles. The tunable structural color can be obtained with adjustable intermediate dielectric layer by simply adjusting the deposition condition, especially the oxygen flow rate during the deposition processes. The resonance condition can be satisfied across the whole visible light region with this special dielectric. The strong absorption caused by the resonance within the metal-SiOx-metal structure accounts for the efficient spectral filtering feature, and the constant phase shift within the dielectric layer leads to angle insensitivity of this color filter. This simple color tuning method for omnidirectional structural colors can have a great potential in various applications such as displaying, imaging, colorful decoration, anti-counterfeiting and so forth.

  7. Interactive Reliability-Based Optimization of Structural Systems

    DEFF Research Database (Denmark)

    Pedersen, Claus

    In order to introduce the basic concepts within the field of reliability-based structural optimization problems, this chapter is devoted to a brief outline of the basic theories. Therefore, this chapter is of a more formal nature and used as a basis for the remaining parts of the thesis. In secti...

  8. An improved AODV routing protocol based on tower structure

    Directory of Open Access Journals (Sweden)

    Li Yong Qiang

    2016-01-01

    Full Text Available The paper proposed a new routing protocol(IAODV based on tower structure in the Ad Hoc network for the problem which Location Routing Protocol need hardware and Complex algorithm. By the simulation, The complexity of the new routing protocol is reduced without reducing the performance of the network.

  9. Synthesis and Crystal Structures of Schiff Bases Bearing Ferrocenylphenyl Groups

    Institute of Scientific and Technical Information of China (English)

    Yan XU; Yong FU; Mao Ping SONG; Yang Jie WU

    2005-01-01

    The Schiff bases bearing ferrocenylphenyl and diferrocenylphenyl groups were synthesized by the reactions of m-ferrocenylaniline with salicylaldehyde or 1, 4-bis (2'-formylphenyl)-1, 4-dioxabutane. The title compounds were characterized by elemental analysis, IR, 1H NMR and X-ray structural determination.

  10. Nominal and Structural Subtyping in Component-Based Programming

    DEFF Research Database (Denmark)

    Ostermann, Klaus

    2007-01-01

    type. We analyze structural and different flavors of nominal subtyping from the perspective of component-based programming, where issues such as blame assignment and modular extensibility are important. Our analysis puts various existing subtyping mechanisms into a common frame of reference...

  11. Factor Structure of the TOEFL Internet-Based Test

    Science.gov (United States)

    Sawaki, Yasuyo; Stricker, Lawrence J.; Oranje, Andreas H.

    2009-01-01

    This construct validation study investigated the factor structure of the Test of English as a Foreign Language[TM] Internet-based test (TOEFL[R] iBT). An item-level confirmatory factor analysis was conducted for a test form completed by participants in a field study. A higher-order factor model was identified, with a higher-order general factor…

  12. Electronic structure of Fe- vs. Ru-based dye molecules

    DEFF Research Database (Denmark)

    Johnson, Phillip S.; Cook, Peter L.; Zegkinoglou, Ioannis;

    2013-01-01

    In order to explore whether Ru can be replaced by inexpensive Fe in dye molecules for solar cells, the differences in the electronic structure of Fe- and Ru-based dyes are investigated by X-ray absorption spectroscopy and first-principles calculations. Molecules with the metal in a sixfold...

  13. Reliability-Based Inspection Planning for Structural Systems

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard

    1993-01-01

    A general model for reliability-based optimal inspection and repair strategies for structural systems is described. The total expected costs in the design lifetime is minimized with the number of inspections, the inspection times and efforts as decision variables. The equivalence of this model wi...

  14. Structural segmentation of music based on repeated harmonies

    NARCIS (Netherlands)

    de Haas, W.B.; Volk, A.; Wiering, F.

    2013-01-01

    In this paper we present a simple, yet powerful method for deriving the structural segmentation of a musical piece based on repetitions in chord sequences, called FORM. Repetition in harmony is a fundamental factor in constituting musical form. However, repeated pattern discovery in music still rema

  15. Gradient based structural optimization with fatigue constraints of jacket structures for offshore wind turbines

    DEFF Research Database (Denmark)

    Oest, Jacob; Overgaard, Lars Christian; Lund, Erik

    2015-01-01

    Investigating the fatigue life of support structures of offshore wind turbines is imperative to avoid unexpected failure. Therefore, in the context of structural optimization, including fatigue constraints is crucial, as the optimized design will meet the design criteria early in the design process...... without the need for extensive manual post-processing. Ultimately, the optimized design may be lighter and thus reduce both production and installation cost. The aim of this work is to present such a gradient based optimization method with fatigue constraints of jacket structures for the preliminary...

  16. Crystal chemistry and structural design of iron-based superconductors

    Institute of Scientific and Technical Information of China (English)

    Jiang Hao; Sun Yun-Lei; Xu Zhu-An; Cao Guang-Han

    2013-01-01

    The second class of high-temperature superconductors (HTSCs),iron-based pnictides and chalcogenides,necessarily contain Fe2X2 (“X” refers to a pnictogen or a chalcogen element) layers,just like the first class of HTSCs which possess the essential CuO2 sheets.So far,dozens of iron-based HTSCs,classified into nine groups,have been discovered.In this article,the crystal-chemistry aspects of the known iron-based superconductors are reviewed and summarized by employing “hard and soft acids and bases (HSAB)” concept.Based on these understandings,we propose an alternative route to exploring new iron-based superconductors via rational structural design.

  17. Performance based investigations of structural systems under fire

    DEFF Research Database (Denmark)

    Gentili, Filippo; Crosti, Chiara; Giuliani, Luisa

    2010-01-01

    Prescriptive measures and procedures developed over the past here are mostly aimed at preventing structural failures of single elements for the time required for the evacuation. The response to fire and fire effects of the structural system as a whole remains often unknown and the survival...... of the construction after this time cannot always be granted. This is even more true in case of unaccounted events like human errors or rare but severe occurrence like a fire after explosion, which cannot be contemplated in the usual design. Even if a structure could be hardly designed to resist fully integer all...... these kinds of events, the mitigation of possible collapse induced by fire should be achieved. In this respect, a performance-based investigation of the structure aimed at highlight fire effects and fire-induced collapse mechanisms becomes of interest. In the paper collapse mechanisms of some simple...

  18. A new entropy based method for computing software structural complexity

    CERN Document Server

    Roca, J L

    2002-01-01

    In this paper a new methodology for the evaluation of software structural complexity is described. It is based on the entropy evaluation of the random uniform response function associated with the so called software characteristic function SCF. The behavior of the SCF with the different software structures and their relationship with the number of inherent errors is investigated. It is also investigated how the entropy concept can be used to evaluate the complexity of a software structure considering the SCF as a canonical representation of the graph associated with the control flow diagram. The functions, parameters and algorithms that allow to carry out this evaluation are also introduced. After this analytic phase follows the experimental phase, verifying the consistency of the proposed metric and their boundary conditions. The conclusion is that the degree of software structural complexity can be measured as the entropy of the random uniform response function of the SCF. That entropy is in direct relation...

  19. A fingerprint based metric for measuring similarities of crystalline structures.

    Science.gov (United States)

    Zhu, Li; Amsler, Maximilian; Fuhrer, Tobias; Schaefer, Bastian; Faraji, Somayeh; Rostami, Samare; Ghasemi, S Alireza; Sadeghi, Ali; Grauzinyte, Migle; Wolverton, Chris; Goedecker, Stefan

    2016-01-21

    Measuring similarities/dissimilarities between atomic structures is important for the exploration of potential energy landscapes. However, the cell vectors together with the coordinates of the atoms, which are generally used to describe periodic systems, are quantities not directly suitable as fingerprints to distinguish structures. Based on a characterization of the local environment of all atoms in a cell, we introduce crystal fingerprints that can be calculated easily and define configurational distances between crystalline structures that satisfy the mathematical properties of a metric. This distance between two configurations is a measure of their similarity/dissimilarity and it allows in particular to distinguish structures. The new method can be a useful tool within various energy landscape exploration schemes, such as minima hopping, random search, swarm intelligence algorithms, and high-throughput screenings.

  20. Modern earthquake engineering offshore and land-based structures

    CERN Document Server

    Jia, Junbo

    2017-01-01

    This book addresses applications of earthquake engineering for both offshore and land-based structures. It is self-contained as a reference work and covers a wide range of topics, including topics related to engineering seismology, geotechnical earthquake engineering, structural engineering, as well as special contents dedicated to design philosophy, determination of ground motions, shock waves, tsunamis, earthquake damage, seismic response of offshore and arctic structures, spatial varied ground motions, simplified and advanced seismic analysis methods, sudden subsidence of offshore platforms, tank liquid impacts during earthquakes, seismic resistance of non-structural elements, and various types of mitigation measures, etc. The target readership includes professionals in offshore and civil engineering, officials and regulators, as well as researchers and students in this field.

  1. Optimization of multi-constrained structures based on optimality criteria

    Science.gov (United States)

    Rizzi, P.

    1976-01-01

    A weight-reduction algorithm is developed for the optimal design of structures subject to several multibehavioral inequality constraints. The structural weight is considered to depend linearly on the design variables. The algorithm incorporates a simple recursion formula derived from the Kuhn-Tucker necessary conditions for optimality, associated with a procedure to delete nonactive constraints based on the Gauss-Seidel iterative method for linear systems. A number of example problems is studied, including typical truss structures and simplified wings subject to static loads and with constraints imposed on stresses and displacements. For one of the latter structures, constraints on the fundamental natural frequency and flutter speed are also imposed. The results obtained show that the method is fast, efficient, and general when compared to other competing techniques. Extensions to the generality of the method to include equality constraints and nonlinear merit functions is discussed.

  2. Inelastic Structural Control Based on MBC and FAM

    Directory of Open Access Journals (Sweden)

    Li Gang

    2011-01-01

    Full Text Available A complex structure has the characters of many degrees of freedom and intricate shape, especially inelastic behavior under strong external loadings. It is hard to apply the structural control technology to it. In this paper, a new method that combines the Market-Based Control (MBC strategy and Force Analogy Method (FAM is presented to analyze the inelastic behavior of structure with magnetorheological dampers. The MBC is used to reduce the structural vibration response, and FAM is proposed to perform the inelastic analysis. A numerical example is used to compare the control effect of the new method and LQR algorithm, which show the accuracy and efficiency of the proposed computational method.

  3. Topography measurement of micro structure by modulation-based method

    Science.gov (United States)

    Zhou, Yi; Tang, Yan; Liu, Junbo; Deng, Qinyuan; Cheng, Yiguang; Hu, Song

    2016-10-01

    Dimensional metrology for micro structure plays an important role in addressing quality issues and observing the performance of micro-fabricated products. Different from the traditional white-light interferometry approach, the modulation-based method is expected to measure topography of micro structure by the obtained modulation of each interferometry image. Through seeking the maximum modulation of every pixel respectively in Z direction, the method could obtain the corresponding height of individual pixel and finally get topography of the structure. Owing to the characteristic of modulation, the proposed method which is not influenced by the change of background light intensity caused by instable light source and different reflection index of the structure could be widely applied with high stability. The paper both illustrates the principle of this novel method and conducts the experiment to verify the feasibility.

  4. Technology of structure damage monitoring based on multi-agent

    Institute of Scientific and Technical Information of China (English)

    Hongbing Sun; Shenfang Yuan; Xia Zhao; Hengbao Zhou; Dong Liang

    2010-01-01

    The health monitoring for large-scale structures need to resolve a large number of difficulties,such as the data transmission and distributing information handling.To solve these problems,the technology of multi-agent is a good candidate to be used in the field of structural health monitoring.A structural health monitoring system architecture based on multi-agent technology is proposed.The measurement system for aircraft airfoil is designed with FBG,strain gage,and corresponding signal processing circuit.The experiment to determine the location of the concentrate loading on the structure is carried on with the system combined with technologies of pattern recognition and multi-agent.The results show that the system can locate the concentrate loading of the aircraft airfoil at the accuracy of 91.2%.

  5. A fingerprint based metric for measuring similarities of crystalline structures

    Energy Technology Data Exchange (ETDEWEB)

    Zhu, Li; Fuhrer, Tobias; Schaefer, Bastian; Grauzinyte, Migle; Goedecker, Stefan, E-mail: stefan.goedecker@unibas.ch [Department of Physics, Universität Basel, Klingelbergstr. 82, 4056 Basel (Switzerland); Amsler, Maximilian [Department of Physics, Universität Basel, Klingelbergstr. 82, 4056 Basel (Switzerland); Department of Materials Science and Engineering, Northwestern University, Evanston, Illinois 60208 (United States); Faraji, Somayeh; Rostami, Samare; Ghasemi, S. Alireza [Institute for Advanced Studies in Basic Sciences, P.O. Box 45195-1159, Zanjan (Iran, Islamic Republic of); Sadeghi, Ali [Physics Department, Shahid Beheshti University, G. C., Evin, 19839 Tehran (Iran, Islamic Republic of); Wolverton, Chris [Department of Materials Science and Engineering, Northwestern University, Evanston, Illinois 60208 (United States)

    2016-01-21

    Measuring similarities/dissimilarities between atomic structures is important for the exploration of potential energy landscapes. However, the cell vectors together with the coordinates of the atoms, which are generally used to describe periodic systems, are quantities not directly suitable as fingerprints to distinguish structures. Based on a characterization of the local environment of all atoms in a cell, we introduce crystal fingerprints that can be calculated easily and define configurational distances between crystalline structures that satisfy the mathematical properties of a metric. This distance between two configurations is a measure of their similarity/dissimilarity and it allows in particular to distinguish structures. The new method can be a useful tool within various energy landscape exploration schemes, such as minima hopping, random search, swarm intelligence algorithms, and high-throughput screenings.

  6. A fingerprint based metric for measuring similarities of crystalline structures

    CERN Document Server

    Zhu, Li; Fuhrer, Tobias; Schaefer, Bastian; Faraji, Somayeh; Rostami, Samara; Ghasemi, S Alireza; Sadeghi, Ali; Grauzinyte, Migle; Wolverton, Christopher; Goedecker, Stefan

    2015-01-01

    Measuring similarities/dissimilarities between atomic structures is important for the exploration of potential energy landscapes. However, the cell vectors together with the coordinates of the atoms, which are generally used to describe periodic systems, are quantities not suitable as fingerprints to distinguish structures. Based on a characterization of the local environment of all atoms in a cell we introduce crystal fingerprints that can be calculated easily and allow to define configurational distances between crystalline structures that satisfy the mathematical properties of a metric. This distance between two configurations is a measure of their similarity/dissimilarity and it allows in particular to distinguish structures. The new method is an useful tool within various energy landscape exploration schemes, such as minima hopping, random search, swarm intelligence algorithms and high-throughput screenings.

  7. Knowledge-based System Prototype in Structural Component Design Based on FM

    Institute of Scientific and Technical Information of China (English)

    JIANG; Tao; LI; Qing-fen; LI; Ming; FU; Wei

    2002-01-01

    A knowledge-based system in structural component design based on fracture mechanics is developed in this paper. The system consists of several functional parts: a general inference engine, a set of knowledge bases and data-bases, an interpretation engine, a bases administration system and the interface. It can simulate a human expert to make analysis and design scheme mainly for four kinds of typical structural components widely used in shipbuilding industry: pressure vessels, huge rotation constructions, pump-rod and welded structures. It is an open system which may be broadened and perfected to cover a wider range of engineering application through the modification and enlargement of knowledge bases and data-bases. It has a natural and friendly interface that may be easily operated. An on-line help service is also provided.

  8. Rock burst prevention based on dissipative structure theory

    Institute of Scientific and Technical Information of China (English)

    Song Dazhao; Wang Enyuan; Li Nan; Jin Mingyue; Xue Shipeng

    2012-01-01

    Dynamic collapses of deeply mined coal rocks are severe.In order to explore new ideas for rock burst prevention,the relationship between entropy equations and dissipative structure was studied,and a concept-rock burst activity system (RAS) was proposed and its entropy was analyzed.The energy features of RAS were analyzed,and the relationship between electromagnetic radiation (EMR) intensity E and dissipated energy Ud was initially established.We suggest that rock burst normally happens only when d,S<< -des in RAS:RAS is the dissipative structure before collapse,and after which it become a new orderly structure,i.e.,a "dead",a statically orderly structure.We advanced that the effective way to prevent rock burst is to introduce entropy to the system for it keeps the system away from the dissipative structure.E and Ud of RAS are positively related,which is used as a bridge between dissipative structure theory and rock burst prevention engineering applications.Based on this.and using the data of rock burst prevention for working face No.250205up of Yanbei coal mine,an engineering verification for the dissipative structure of RAS was carried out,which showed good results.

  9. Nonlinear feature identification of impedance-based structural health monitoring

    Energy Technology Data Exchange (ETDEWEB)

    Rutherford, A. C. (Amanda C.); Park, G. H. (Gyu Hae); Sohn, H. (Hoon); Farrar, C. R. (Charles R.)

    2004-01-01

    The impedance-based structural health monitoring technique, which utilizes electromechanical coupling properties of piezoelectric materials, has shown feasibility for use in a variety of structural health monitoring applications. Relying on high frequency local excitations (typically > 30 kHz), this technique is very sensitive to minor changes in structural integrity in the near field of piezoelectric sensors. Several damage sensitive features have been identified and used coupled with the impedance methods. Most of these methods are, however, limited to linearity assumptions of a structure. This paper presents the use of experimentally identified nonlinear features, combined with impedance methods, for structural health monitoring. Their applicability to damage detection in various frequency ranges is demonstrated using actual impedance signals measured from a portal frame structure. The performance of the nonlinear feature is compared with those of conventional impedance methods. This paper reinforces the utility of nonlinear features in structural health monitoring and suggests that their varying sensitivity in different frequency ranges may be leveraged for certain applications.

  10. Statistical Pattern-Based Assessment of Structural Health Monitoring Data

    Directory of Open Access Journals (Sweden)

    Mohammad S. Islam

    2014-01-01

    Full Text Available In structural health monitoring (SHM, various sensors are installed at critical locations of a structure. The signals from sensors are either continuously or periodically analyzed to determine the state and performance of the structure. An objective comparison of the sensor data at different time ranges is essential for assessing the structural condition or excessive load experienced by the structure which leads to potential damage in the structure. The objectives of the current study are to establish a relationship between the data from various sensors to estimate the reliability of the data and potential damage using the statistical pattern matching techniques. In order to achieve these goals, new methodologies based on statistical pattern recognition techniques have been developed. The proposed methodologies have been developed and validated using sensor data obtained from an instrumented bridge and road test data from heavy vehicles. The application of statistical pattern matching techniques are relatively new in SHM data interpretation and current research demonstrates that it has high potential in assessing structural conditions, especially when the data are noisy and susceptible to environmental disturbances.

  11. Dissimilarity-based classification of anatomical tree structures

    DEFF Research Database (Denmark)

    Sørensen, Lauge Emil Borch Laurs; Lo, Pechin Chien Pau; Dirksen, Asger

    2011-01-01

    A novel method for classification of abnormality in anatomical tree structures is presented. A tree is classified based on direct comparisons with other trees in a dissimilarity-based classification scheme. The pair-wise dissimilarity measure between two trees is based on a linear assignment...... by including anatomical features in the branch feature vectors. The proposed approach is applied to classify airway trees in computed tomography images of subjects with and without chronic obstructive pulmonary disease (COPD). Using the wall area percentage (WA%), a common measure of airway abnormality in COPD...

  12. Insertions and the emergence of novel protein structure: a structure-based phylogenetic study of insertions

    Directory of Open Access Journals (Sweden)

    Blouin Christian

    2007-11-01

    Full Text Available Abstract Background In protein evolution, the mechanism of the emergence of novel protein domain is still an open question. The incremental growth of protein variable regions, which was produced by stochastic insertions, has the potential to generate large and complex sub-structures. In this study, a deterministic methodology is proposed to reconstruct phylogenies from protein structures, and to infer insertion events in protein evolution. The analysis was performed on a broad range of SCOP domain families. Results Phylogenies were reconstructed from protein 3D structural data. The phylogenetic trees were used to infer ancestral structures with a consensus method. From these ancestral reconstructions, 42.7% of the observed insertions are nested insertions, which locate in previous insert regions. The average size of inserts tends to increase with the insert rank or total number of insertions in the variable regions. We found that the structures of some nested inserts show complex or even domain-like fold patterns with helices, strands and loops. Furthermore, a basal level of structural innovation was found in inserts which displayed a significant structural similarity exclusively to themselves. The β-Lactamase/D-ala carboxypeptidase domain family is provided as an example to illustrate the inference of insertion events, and how the incremental growth of a variable region is capable to generate novel structural patterns. Conclusion Using 3D data, we proposed a method to reconstruct phylogenies. We applied the method to reconstruct the sequences of insertion events leading to the emergence of potentially novel structural elements within existing protein domains. The results suggest that structural innovation is possible via the stochastic process of insertions and rapid evolution within variable regions where inserts tend to be nested. We also demonstrate that the structure-based phylogeny enables the study of new questions relating to the

  13. Single-Walled Carbon-Nanotubes-Based Organic Memory Structures

    Directory of Open Access Journals (Sweden)

    Sundes Fakher

    2016-09-01

    Full Text Available The electrical behaviour of organic memory structures, based on single-walled carbon-nanotubes (SWCNTs, metal–insulator–semiconductor (MIS and thin film transistor (TFT structures, using poly(methyl methacrylate (PMMA as the gate dielectric, are reported. The drain and source electrodes were fabricated by evaporating 50 nm gold, and the gate electrode was made from 50 nm-evaporated aluminium on a clean glass substrate. Thin films of SWCNTs, embedded within the insulating layer, were used as the floating gate. SWCNTs-based memory devices exhibited clear hysteresis in their electrical characteristics (capacitance–voltage (C–V for MIS structures, as well as output and transfer characteristics for transistors. Both structures were shown to produce reliable and large memory windows by virtue of high capacity and reduced charge leakage. The hysteresis in the output and transfer characteristics, the shifts in the threshold voltage of the transfer characteristics, and the flat-band voltage shift in the MIS structures were attributed to the charging and discharging of the SWCNTs floating gate. Under an appropriate gate bias (1 s pulses, the floating gate is charged and discharged, resulting in significant threshold voltage shifts. Pulses as low as 1 V resulted in clear write and erase states.

  14. Blind test of physics-based prediction of protein structures.

    Science.gov (United States)

    Shell, M Scott; Ozkan, S Banu; Voelz, Vincent; Wu, Guohong Albert; Dill, Ken A

    2009-02-01

    We report here a multiprotein blind test of a computer method to predict native protein structures based solely on an all-atom physics-based force field. We use the AMBER 96 potential function with an implicit (GB/SA) model of solvation, combined with replica-exchange molecular-dynamics simulations. Coarse conformational sampling is performed using the zipping and assembly method (ZAM), an approach that is designed to mimic the putative physical routes of protein folding. ZAM was applied to the folding of six proteins, from 76 to 112 monomers in length, in CASP7, a community-wide blind test of protein structure prediction. Because these predictions have about the same level of accuracy as typical bioinformatics methods, and do not utilize information from databases of known native structures, this work opens up the possibility of predicting the structures of membrane proteins, synthetic peptides, or other foldable polymers, for which there is little prior knowledge of native structures. This approach may also be useful for predicting physical protein folding routes, non-native conformations, and other physical properties from amino acid sequences.

  15. Reliability-Based Structural Optimization of Wave Energy Converters

    Directory of Open Access Journals (Sweden)

    Simon Ambühl

    2014-12-01

    Full Text Available More and more wave energy converter (WEC concepts are reaching prototypelevel. Once the prototype level is reached, the next step in order to further decrease thelevelized cost of energy (LCOE is optimizing the overall system with a focus on structuraland maintenance (inspection costs, as well as on the harvested power from the waves.The target of a fully-developed WEC technology is not maximizing its power output,but minimizing the resulting LCOE. This paper presents a methodology to optimize thestructural design of WECs based on a reliability-based optimization problem and the intentto maximize the investor’s benefits by maximizing the difference between income (e.g., fromselling electricity and the expected expenses (e.g., structural building costs or failure costs.Furthermore, different development levels, like prototype or commercial devices, may havedifferent main objectives and will be located at different locations, as well as receive varioussubsidies. These points should be accounted for when performing structural optimizationsof WECs. An illustrative example on the gravity-based foundation of the Wavestar deviceis performed showing how structural design can be optimized taking target reliability levelsand different structural failure modes due to extreme loads into account.

  16. Electronic origin of structural transition in 122 Fe based superconductors

    Science.gov (United States)

    Ghosh, Haranath; Sen, Smritijit; Ghosh, Abyay

    2017-03-01

    Direct quantitative correlations between the orbital order and orthorhombicity is achieved in a number of Fe-based superconductors of 122 family. The former (orbital order) is calculated from first principles simulations using experimentally determined doping and temperature dependent structural parameters while the latter (the orthorhombicity) is taken from already established experimental studies; when normalized, both the above quantities quantitatively corresponds to each other in terms of their doping as well as temperature variations. This proves that the structural transition in Fe-based materials is electronic in nature due to orbital ordering. An universal correlations among various structural parameters and electronic structure are also obtained. Most remarkable among them is the mapping of two Fe-Fe distances in the low temperature orthorhombic phase, with the band energies Edxz, Edyz of Fe at the high symmetry points of the Brillouin zone. The fractional co-ordinate zAs of As which essentially determines anion height is inversely (directly) proportional to Fe-As bond distances (with exceptions of K doped BaFe2As2) for hole (electron) doped materials as a function of doping. On the other hand, Fe-As bond-distance is found to be inversely (directly) proportional to the density of states at the Fermi level for hole (electron) doped systems. Implications of these results to current issues of Fe based superconductivity are discussed.

  17. Value of information-based inspection planning for offshore structures

    DEFF Research Database (Denmark)

    Irman, Arifian Agusta; Thöns, Sebastian; Leira, Bernt J.

    2017-01-01

    -based inspection planning. The paper will start out with a review of the state-of-art RBI planning procedure based on Bayesian decision theory and its application in offshore structure integrity management. An example of the Value of Information approach is illustrated and it is pointed to further research...... and risk- based inspection (RRBI) constitutes an efficient method to optimize inspection planning. Basing the inspection planning on pre-posterior Bayesian decision analysis and especially a Value of Information analysis allows to explicitly quantify the expected benefits, costs and risks associated...... with each inspection strategy. A simplified and generic risk-based inspection planning utilizing pre- posterior Bayesian decision analysis had been proposed by Faber et al. [1] and Straub [2]. This paper provides considerations on the theoretical background and a Value of Information analysis...

  18. Design and Additive Manufacturing of 3D Phononic Band Gap Structures Based on Gradient Based Optimization

    Directory of Open Access Journals (Sweden)

    Maximilian Wormser

    2017-09-01

    Full Text Available We present a novel approach for gradient based maximization of phononic band gaps. The approach is a geometry projection method combining parametric shape optimization with density based topology optimization. By this approach, we obtain, in a two dimension setting, cellular structures exhibiting relative and normalized band gaps of more than 8 and 1.6, respectively. The controlling parameter is the minimal strut size, which also corresponds with the obtained stiffness of the structure. The resulting design principle is manually interpreted into a three dimensional structure from which cellular metal samples are fabricated by selective electron beam melting. Frequency response diagrams experimentally verify the numerically determined phononic band gaps of the structures. The resulting structures have band gaps down to the audible frequency range, qualifying the structures for an application in noise isolation.

  19. A new hybrid coding for protein secondary structure prediction based on primary structure similarity.

    Science.gov (United States)

    Li, Zhong; Wang, Jing; Zhang, Shunpu; Zhang, Qifeng; Wu, Wuming

    2017-03-16

    The coding pattern of protein can greatly affect the prediction accuracy of protein secondary structure. In this paper, a novel hybrid coding method based on the physicochemical properties of amino acids and tendency factors is proposed for the prediction of protein secondary structure. The principal component analysis (PCA) is first applied to the physicochemical properties of amino acids to construct a 3-bit-code, and then the 3 tendency factors of amino acids are calculated to generate another 3-bit-code. Two 3-bit-codes are fused to form a novel hybrid 6-bit-code. Furthermore, we make a geometry-based similarity comparison of the protein primary structure between the reference set and the test set before the secondary structure prediction. We finally use the support vector machine (SVM) to predict those amino acids which are not detected by the primary structure similarity comparison. Experimental results show that our method achieves a satisfactory improvement in accuracy in the prediction of protein secondary structure.

  20. Protein NMR Structure Refinement based on Bayesian Inference

    Science.gov (United States)

    Ikeya, Teppei; Ikeda, Shiro; Kigawa, Takanori; Ito, Yutaka; Güntert, Peter

    2016-03-01

    Nuclear Magnetic Resonance (NMR) spectroscopy is a tool to investigate threedimensional (3D) structures and dynamics of biomacromolecules at atomic resolution in solution or more natural environments such as living cells. Since NMR data are principally only spectra with peak signals, it is required to properly deduce structural information from the sparse experimental data with their imperfections and uncertainty, and to visualize 3D conformations by NMR structure calculation. In order to efficiently analyse the data, Rieping et al. proposed a new structure calculation method based on Bayes’ theorem. We implemented a similar approach into the program CYANA with some modifications. It allows us to handle automatic NOE cross peak assignments in unambiguous and ambiguous usages, and to create a prior distribution based on a physical force field with the generalized Born implicit water model. The sampling scheme for obtaining the posterior is performed by a hybrid Monte Carlo algorithm combined with Markov chain Monte Carlo (MCMC) by the Gibbs sampler, and molecular dynamics simulation (MD) for obtaining a canonical ensemble of conformations. Since it is not trivial to search the entire function space particularly for exploring the conformational prior due to the extraordinarily large conformation space of proteins, the replica exchange method is performed, in which several MCMC calculations with different temperatures run in parallel as replicas. It is shown with simulated data or randomly deleted experimental peaks that the new structure calculation method can provide accurate structures even with less peaks, especially compared with the conventional method. In particular, it dramatically improves in-cell structures of the proteins GB1 and TTHA1718 using exclusively information obtained in living Escherichia coli (E. coli) cells.

  1. A New Silicon-Based Ferroelectric Sandwich Structure

    Institute of Scientific and Technical Information of China (English)

    任天令; 张林涛; 刘理天; 李志坚

    2001-01-01

    A new silicon-based PbTiO3/Pb(Zr0.53 Ti0.47)O3/PbTiO3 sandwich structure is fabricated by a sol-gel method. Compared with other fabrication processes without PbTiO3 buffer layers, the annealing temperature is greatly reduced by as much as 100℃. Capacitance-voltage, polarization-electric field and dielectric-frequency properties of this sandwich structure are studied. The Pb(Zrx Ti1-x)O3 films are proved to have good dielectric and ferroelectric properties.

  2. Miniature Microwave Bandpass Filter Based on EBG Structures

    DEFF Research Database (Denmark)

    Zhurbenko, Vitaliy; Krozer, Viktor; Meincke, Peter

    2006-01-01

    A new design of a planar microwave filter, based on rejection band properties of an electrically small electromagnetic bandgap (EBG) structure, is proposed. The proposed EBG structure demonstrates effective impedance manipulation, exhibits a simple analysis, and is about three times smaller...... as compared to stepped-impedance hairpin (SIH) resonators with similar response. The new bandpass filter has a reduced footprint and can be fabricated in standard thick-film manufacturing technology. Measured and simulated results exhibit good agreement. The measured results show improvement in the filter...

  3. A CADASTRAL SPATIAL DATA STORAGE STRUCTURE BASED ON RELATIONAL DATABASE

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    This paper presents a cadastral spatial data storage structure based on relational database,the method and the procedure to realize it.The paper consists of three parts.In the first part,some existing problems in some de veloped cadastral management systems are discussed.These problems are the fo llowing four.1) The security of cadastral spatial data is difficult to be assure d.2) It is difficult to varify cadastral data and the integrality of cadastral d ata is diffi cult to be kept.3) To transmit and share cadastral data is difficult.4) The effi ciency of data access is low.In the second part,t he feasibility of using relational database to store spatial data is analyzed an d a new cadastral spatial data storage structure is presented.At the same time, the related table structures and field descriptions are given,and then the merits and demerits of this storage structure are analyzed in detail.In th e last part,through a real example,the detailed methods to make the new storag e structure a reality are given.Moreover,some involving key techniques of the ne w storage structure are discussed.These techniques are:1) the application of database transaction,2) the application of database trigger,3) and the appl ication of secure recovery of database.

  4. Particle filtering based structural assessment with acoustic emission sensing

    Science.gov (United States)

    Yan, Wuzhao; Abdelrahman, Marwa; Zhang, Bin; Ziehl, Paul

    2017-02-01

    Nuclear structures are designed to withstand severe loading events under various stresses. Over time, aging of structural systems constructed with concrete and steel will occur. This deterioration may reduce service life of nuclear facilities and/or lead to unnecessary or untimely repairs. Therefore, online monitoring of structures in nuclear power plants and waste storage has drawn significant attention in recent years. Of many existing non-destructive evaluation and structural monitoring approaches, acoustic emission is promising for assessment of structural damage because it is non-intrusive and is sensitive to corrosion and crack growth in reinforced concrete elements. To provide a rapid, actionable, and graphical means for interpretation Intensity Analysis plots have been developed. This approach provides a means for classification of damage. Since the acoustic emission measurement is only an indirect indicator of structural damage, potentially corrupted by non-genuine data, it is more suitable to estimate the states of corrosion and cracking in a Bayesian estimation framework. In this paper, we will utilize the accelerated corrosion data from a specimen at the University of South Carolina to develop a particle filtering-based diagnosis and prognosis algorithm. Promising features of the proposed algorithm are described in terms of corrosion state estimation and prediction of degradation over time to a predefined threshold.

  5. Diode rectifier bridge-based structure for DFIG-based wind turbine

    DEFF Research Database (Denmark)

    Zhu, Rongwu; Chen, Zhe; Wu, Xiaojie

    2015-01-01

    This paper proposes a new structure for the doubly-fed induction generator (DFIG)-based wind turbine. The proposed structure consists of a DFIG controlled by a partial rated power converter in the rotor side, a three-phase diode rectifier bridge (DRB) connected to the stator, and a DC/AC full rated...... power inverter. As this structure could isolate the DFIG and the grid by a DC-link, the DFIG could avoid the direct influences from the grid, and achieve fault ride through requirement easily. Based on this structure, two control strategies are developed to control the DFIG and fulfill maximum power...... output. The simulation results based a MATALAB/Simulink using a 2MW DFIG compare the performances of DFIG system with the two control strategies. Further, the experimental results based on a scaled-down setup with a 7.5kW DFIG validate the correctness of the control strategies....

  6. Integrated Teaching of Structure-Based Drug Design and Biopharmaceutics: A Computer-Based Approach

    Science.gov (United States)

    Sutch, Brian T.; Romero, Rebecca M.; Neamati, Nouri; Haworth, Ian S.

    2012-01-01

    Rational drug design requires expertise in structural biology, medicinal chemistry, physiology, and related fields. In teaching structure-based drug design, it is important to develop an understanding of the need for early recognition of molecules with "drug-like" properties as a key component. That is, it is not merely sufficient to teach…

  7. Solar Cells Based on Low-dimensional Nanocomposite Structures

    Directory of Open Access Journals (Sweden)

    S.L. Khrypko

    2016-12-01

    Full Text Available Converting solar energy into electric energy with using of solar batteries is a major task for developers and research teams. In this article we will look at the development of different generations of solar batteries for to create a nanocomposite structure. Production of solar batteries has gone through some steps, taking into account technological and economic aspects that have been associated with improved of their parameters. Thus the first generations of solar batteries have been based on the single-crystal silicon substrates (с-Si. The use of polycrystalline silicon and multi- crystalline allowed lower costs of modules, but due to the efficiency of solar energy conversion. The solar batteries of the second generation were based on thin-film technology, in which use different materials: silicon films based on amorphous silicon (a-Si, a film based on cadmium telluride (CdTe and film selenide copper-indium-gallium (CuInGaSe2, or CIGS. The use of such technology has allowed increasing the coefficient of performance (COP solar cell with a significant reduction in costs. The solar batteries of third-generation based on nanotechnology, nanocrystals and nano-sized clusters of semiconductors. The creation of such solar cells requires availability of a low-dimensional composite structure. Low-dimensional nanocomposite structures that are constructed on quantum dots and nano-porous materials have new modified optoelectronic properties. They can be used in solar elements, where absorption bands can be optimally adapted to the wavelength of radiation light. These structures could theoretically can lead to increased efficiency of solar energy conversion more than 65%, which can double practically current efficiency of solar batteries.

  8. Performance based analysis of hidden beams in reinforced concrete structures

    Directory of Open Access Journals (Sweden)

    Helou Samir H.

    2014-01-01

    Full Text Available Local and perhaps regional vernacular reinforced concrete building construction leans heavily against designing slabs with imbedded hidden beams for flooring systems in most structures including major edifices. The practice is distinctive in both framed and in shear wall structures. Hidden beams are favoured structural elements due to their many inherent features that characterize them; they save on floor height clearance; they also save on formwork, labour and material cost. Moreover, hidden beams form an acceptable aesthetic appearance that does not hinder efficient interior space partitioning. Such beams have the added advantage of clearing the way for horizontal electromechanical ductwork. However, seismic considerations, in all likelihood, are seldom seriously addressed. The mentioned structural system of shallow beams is adopted in ribbed slabs, waffle slabs and at times with solid slabs. Ribbed slabs and waffle slabs are more prone to hidden beam inclusion due to the added effective height of the concrete section. Due to the presence of a relatively high reinforcement ratio at the joints the sections at such location tend to become less ductile with unreliable contribution to spandrel force resistance. In the following study the structural influence of hidden beams within slabs is investigated. With the primary focus on a performance based analysis of such elements within a structure. This is investigated with due attention to shear wall contribution to the overall behaviour of such structures. Numerical results point in the direction that the function of hidden beams is not as adequate as desired. Therefore it is strongly believed that they are generally superfluous and maybe eliminated altogether. Conversely, shallow beams seem to render the overall seismic capacity of the structure unreliable. Since such an argument is rarely manifested within the linear analysis domain; a pushover analysis exercise is thus mandatory for behaviour

  9. A protein relational database and protein family knowledge bases to facilitate structure-based design analyses.

    Science.gov (United States)

    Mobilio, Dominick; Walker, Gary; Brooijmans, Natasja; Nilakantan, Ramaswamy; Denny, R Aldrin; Dejoannis, Jason; Feyfant, Eric; Kowticwar, Rupesh K; Mankala, Jyoti; Palli, Satish; Punyamantula, Sairam; Tatipally, Maneesh; John, Reji K; Humblet, Christine

    2010-08-01

    The Protein Data Bank is the most comprehensive source of experimental macromolecular structures. It can, however, be difficult at times to locate relevant structures with the Protein Data Bank search interface. This is particularly true when searching for complexes containing specific interactions between protein and ligand atoms. Moreover, searching within a family of proteins can be tedious. For example, one cannot search for some conserved residue as residue numbers vary across structures. We describe herein three databases, Protein Relational Database, Kinase Knowledge Base, and Matrix Metalloproteinase Knowledge Base, containing protein structures from the Protein Data Bank. In Protein Relational Database, atom-atom distances between protein and ligand have been precalculated allowing for millisecond retrieval based on atom identity and distance constraints. Ring centroids, centroid-centroid and centroid-atom distances and angles have also been included permitting queries for pi-stacking interactions and other structural motifs involving rings. Other geometric features can be searched through the inclusion of residue pair and triplet distances. In Kinase Knowledge Base and Matrix Metalloproteinase Knowledge Base, the catalytic domains have been aligned into common residue numbering schemes. Thus, by searching across Protein Relational Database and Kinase Knowledge Base, one can easily retrieve structures wherein, for example, a ligand of interest is making contact with the gatekeeper residue.

  10. Vaccines based on structure-based design provide protection against infectious diseases.

    Science.gov (United States)

    Thomas, Sunil; Luxon, Bruce A

    2013-11-01

    Vaccines elicit immune responses, provide protection against microorganisms and are considered as one of the most successful medical interventions against infectious diseases. Vaccines can be produced using attenuated virus or bacteria, recombinant proteins, bacterial polysaccharides, carbohydrates or plasmid DNA. Conventional vaccines rely on the induction of immune responses against antigenic proteins to be effective. The genetic diversity of microorganisms, coupled with the high degree of sequence variability in antigenic proteins, presents a challenge to developing broadly effective conventional vaccines. The observation that whole protein antigens are not necessarily essential for inducing immunity has led to the emergence of a new branch of vaccine design termed 'structural vaccinology'. Structure-based vaccines are designed on the rationale that protective epitopes should be sufficient to induce immune responses and provide protection against pathogens. Recent studies demonstrated that designing structure-based vaccine candidates with multiple epitopes induce a higher immune response. As yet there are no commercial vaccines available based on structure-based design and most of the structure-based vaccine candidates are in the preclinical stages of development. This review focuses on recent advances in structure-based vaccine candidates and their application in providing protection against infectious diseases.

  11. A wavelet watermarking algorithm based on a tree structure

    Science.gov (United States)

    Guitart Pla, Oriol; Lin, Eugene T.; Delp, Edward J., III

    2004-06-01

    We describe a blind watermarking technique for digital images. Our technique constructs an image-dependent watermark in the discrete wavelet transform (DWT) domain and inserts the watermark in the most signifcant coefficients of the image. The watermarked coefficients are determined by using the hierarchical tree structure induced by the DWT, similar in concept to embedded zerotree wavelet (EZW) compression. If the watermarked image is attacked or manipulated such that the set of significant coefficients is changed, the tree structure allows the correlation-based watermark detector to recover synchronization. Our technique also uses a visual adaptive scheme to insert the watermark to minimize watermark perceptibility. The visual adaptive scheme also takes advantage of the tree structure. Finally, a template is inserted into the watermark to provide robustness against geometric attacks. The template detection uses the cross-ratio of four collinear points.

  12. Lamb waves dispersion curves for diamond based piezoelectric layered structure

    Science.gov (United States)

    Sorokin, B. P.; Kvashnin, G. M.; Telichko, A. V.; Novoselov, A. S.; Burkov, S. I.

    2016-03-01

    The presence of spurious peaks in the amplitude-frequency response of diamond based piezoelectric layered structure was shown. Excitation of such peaks results in deterioration of an useful acoustical signal. It was shown that such spurious peaks should be associated with Lamb waves in a layered structure. By means of FEM analysis, the propagation of acoustic waves of different types in the piezoelectric layered structure "Al/AlN/Mo/(100) diamond" has been investigated in detail. By analyzing the elastic displacement patterns at frequencies from 0 up to 250 MHz, a set of all the possible acoustic waves, especially Lamb modes, have been studied, and dispersive curves of phase velocity have been plotted. A revised classification of Lamb modes has been introduced.

  13. Analysis of structural macroeconomic indicators based on harmony approach

    Directory of Open Access Journals (Sweden)

    Knyshenko, Tetyana

    2012-05-01

    Full Text Available In the article the application of fractal theory and proportions of «gold section» is considered to the analysis of macroeconomic indicators, the criteria of optimum and efficiency of structure of economy are selected. An economy is represented as treelike fractal, every level of which is characterized by potential of profits (by the issue and necessity in charges. The types of structural subsystems in an economy are selected: permanent and temporal, the last arise up at violation of systems optimum. An author drew conclusion that on the certain types of economic activity structural subsystems can be effective, but they can not be named optimum, as there are deviations from the «gold section» at the certain type of the technological mode, in the issue, intermediate consumption and GVP. A conclusion about the type of the technological mode based on analysis of investment of spheres and types of economic activity in forming of macroeconomic indexes.

  14. Optimization of Land Use Structure Based on Ecological GREEN Equivalent

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Optimization of land use structure consists of economic and social and ecological optimization.Applying the minds of system engineering and principles of ecology,this paper presents such thoughts:the optimal forest-coverage rate calculated according to the reality of a district is set as main standard of ecological rationality in the district;through considering the value of ecosystem services of the land with GREEN equivalent (mainly cultivated land and grassland)and based on the rule,GREEN equivalent,this paper introduces the area conversion between woodland and cultivated land,also between woodland and grassland;this paper establishes a multi-dimension controlling model of optimization of land use structure.In addition,a multi-objective linear programming model for optimization of land use structure is designed.In the end,this paper tests and verifies this theory of ecological optimization,taking Qionghai city in Hainan Province as an example.

  15. NEW APPROACH FOR IMAGE REPRESENTATION BASED ON GEOMETRIC STRUCTURAL CONTENTS

    Institute of Scientific and Technical Information of China (English)

    Jia Xiaomeng; Wang Guoyu

    2003-01-01

    This paper presents a novel approach for representation of image contents based on edge structural features. Edge detection is carried out for an image in the pre-processing stage.For feature representation, edge pixels are grouped into a set of segments through geometrical partitioning of the whole edge image. Then the invariant feature vector is computed for each edge-pixel segment. Thereby the image is represented with a set of spatially distributed feature vectors, each of which describes the local pattern of edge structures. Matching of two images can be achieved by the correspondence of two sets of feature vectors. Without the difficulty of image segmentation and object extraction due to the complexity of the real world images, the proposed approach provides a simple and flexible description for the image with complex scene, in terms of structural features of the image content. Experiments with real images illustrate the effectiveness of this new method.

  16. Scalable, ultra-resistant structural colors based on network metamaterials

    CERN Document Server

    Galinski, Henning; Dong, Hao; Gongora, Juan S Totero; Favaro, Grégory; Döbeli, Max; Spolenak, Ralph; Fratalocchi, Andrea; Capasso, Federico

    2016-01-01

    Structural colours have drawn wide attention for their potential as a future printing technology for various applications, ranging from biomimetic tissues to adaptive camouflage materials. However, an efficient approach to realise robust colours with a scalable fabrication technique is still lacking, hampering the realisation of practical applications with this platform. Here we develop a new approach based on large scale network metamaterials, which combine dealloyed subwavelength structures at the nanoscale with loss-less, ultra-thin dielectrics coatings. By using theory and experiments, we show how sub-wavelength dielectric coatings control a mechanism of resonant light coupling with epsilon-near-zero (ENZ) regions generated in the metallic network, manifesting the formation of highly saturated structural colours that cover a wide portion of the spectrum. Ellipsometry measurements report the efficient observation of these colours even at angles of $70$ degrees. The network-like architecture of these nanoma...

  17. AGENT based structural static and dynamic collaborative optimization

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A static and dynamic collaborative optimization mode for complex machine system and itsontology project relationship are put forward, on which an agent-based structural static and dynamiccollaborative optimization system is constructed as two agent colonies: optimization agent colony andfinite element analysis colony. And a two-level solving strategy as well as the necessity and possibilityfor handing with finite element analysis model in multi-level mode is discussed. Furthermore, the coop-eration of all FEA agents for optimal design of complicated structural is studied in detail. Structural stat-ic and dynamic collaborative optimization of hydraulic excavator working equimpent is taken as an ex-ample to show that the system is reliable.

  18. Disaster mitigation based on smart structures/materials

    Science.gov (United States)

    Asanuma, H.; Su, J.; Shahinpoor, M.; Felli, F.; Paolozzi, A.; Nejhad, M.; Hihara, L.; Aimmanee, S.; Furuya, Y.; Adachi, K.; Yanaseko, T.

    2016-04-01

    The concept "Disaster Mitigation and Sustainable Engineering" is introduced comprehensively and several examples are shown in this paper. It is emphasized that it can be effectively realized in the field "smart materials and structural systems." As serious disasters may not occur for a long period of time, and the structures for disaster mitigation suffer from vast amount of maintenance cost etc., they are better to be used daily. Their compactness and deploying function are also very useful. In order to demonstrate the concept, two examples having been experimentally tried are introduced, that is, artificial forests and deployable structure based on honeycomb to be used against flooding. Other examples and products in the world are also introduced and future directions are discussed.

  19. Wheel pose measurement based on cross structure light

    Science.gov (United States)

    Zhao, Qiancheng; Ding, Xun; Wang, Xian; Zhao, Yafeng

    2016-01-01

    It's necessary for automobile to detect and adjust four-wheel alignment parameters regularly, due to the significant effect on improving stability, enhancing security and reducing tire wear of automobiles. In order to measure the parameters that determined by relative position and posture of four wheels to the automobile cab, this paper proposes a method which applies monocular vision of linear structure light to wheel pose measurement. Firstly, space coordinates of feature point cloud are calculated out from the principle of structured light. Then, an algorithm is designed to determine the normal vector of wheel tangent plane and measure the wheel pose. Finally, actual experiments that by evaluation of adjusted wheel angle measurement are carried out to verify the system accuracy. The corresponding studies can be applied in designing and developing 3D four-wheel alignment system that based on structured light.

  20. Copula-based measures of dependence structure in assets returns

    Science.gov (United States)

    Fernandez, Viviana

    2008-06-01

    Copula modeling has become an increasingly popular tool in finance to model assets returns dependency. In essence, copulas enable us to extract the dependence structure from the joint distribution function of a set of random variables and, at the same time, to isolate such dependence structure from the univariate marginal behavior. In this study, based on US stock data, we illustrate how tail-dependency tests may be misleading as a tool to select a copula that closely mimics the dependency structure of the data. This problem becomes more severe when the data is scaled by conditional volatility and/or filtered out for serial correlation. The discussion is complemented, under more general settings, with Monte Carlo simulations and portfolio management implications.

  1. Healing Temperature of Hybrid Structures Based on Genetic Algorithm

    Institute of Scientific and Technical Information of China (English)

    赵中伟; 陈志华; 刘红波

    2016-01-01

    The healing temperature of suspen-dome with stacked arches(SDSA)and arch-supported single-layer lattice shell structures was investigated based on the genetic algorithm. The temperature field of arch under solar radiation was derived by FLUENT to investigate the influence of solar radiation on the determination of the healing temperature. Moreover, a multi-scale model was established to apply the complex temperature field under solar radiation. The change in the mechanical response of these two kinds of structures with the healing temperature was discussed. It can be concluded that solar radiation has great influence on the healing temperature, and the genetic algorithm can be effectively used in the optimization of the healing temperature for hybrid structures.

  2. CING: an integrated residue-based structure validation program suite

    Energy Technology Data Exchange (ETDEWEB)

    Doreleijers, Jurgen F. [Radboud University Medical Centre, CMBI (Netherlands); Sousa da Silva, Alan W. [European Bioinformatics Institute, UniProt (United Kingdom); Krieger, Elmar [YASARA Biosciences GmbH (Austria); Nabuurs, Sander B. [Radboud University Medical Centre, CMBI (Netherlands); Spronk, Christian A. E. M. [Spronk NMR Consultancy UAB (Lithuania); Stevens, Tim J. [University of Cambridge, Department of Biochemistry (United Kingdom); Vranken, Wim F. [VIB, Department of Structural Biology (Belgium); Vriend, Gert [Radboud University Medical Centre, CMBI (Netherlands); Vuister, Geerten W., E-mail: gv29@le.ac.uk [University of Leicester, Department of Biochemistry (United Kingdom)

    2012-11-15

    We present a suite of programs, named CING for Common Interface for NMR Structure Generation that provides for a residue-based, integrated validation of the structural NMR ensemble in conjunction with the experimental restraints and other input data. External validation programs and new internal validation routines compare the NMR-derived models with empirical data, measured chemical shifts, distance- and dihedral restraints and the results are visualized in a dynamic Web 2.0 report. A red-orange-green score is used for residues and restraints to direct the user to those critiques that warrant further investigation. Overall green scores below {approx}20 % accompanied by red scores over {approx}50 % are strongly indicative of poorly modelled structures. The publically accessible, secure iCing webserver (https://nmr.le.ac.ukhttps://nmr.le.ac.uk) allows individual users to upload the NMR data and run a CING validation analysis.

  3. Applications of structure-based design to antibacterial drug discovery.

    Science.gov (United States)

    Cain, Ricky; Narramore, Sarah; McPhillie, Martin; Simmons, Katie; Fishwick, Colin W G

    2014-08-01

    In recent years bacterial resistance has been observed against many of our current antibiotics, for instance most worryingly against the cephalosporins which are typically the last line of defence against many bacterial infections. Additionally the failure of high throughput screening in the discovery of new antibacterial drug leads has led to a decline in the number of antibacterial agents reaching the market. Alternative methods of drug discovery including structure based drug design are needed to meet the threats caused by the emergence of resistance. In this review we explore the latest advancements in the identification of new antibacterial agents through the use of a number of structure based drug design programs. Copyright © 2014 Elsevier Inc. All rights reserved.

  4. Machine Translation Based on Translation Corresponding Tree Structure

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A representation schema called translation corresponding tree (TCT) has been applied to a Portuguese to Chinese example-based machine translation system. The translation examples are annotated by the representation of the TCT structure. Each TCT describes not only the syntactic structure of the source sentence (i.e., Portuguese in our system) but also the translation correspondences (i.e., Chinese translation). In addition, the TCT nodes describe the corresponding linguistic relationships between the source and target languages. The translation examples can be effectively represented with this annotation schema and organized in the bilingual knowledge database or example base. In the real machine translation process, the target language is synthesized with higher quality by referring to the TCT translation information.

  5. Structure-Based Virtual Screening of Commercially Available Compound Libraries.

    Science.gov (United States)

    Kireev, Dmitri

    2016-01-01

    Virtual screening (VS) is an efficient hit-finding tool. Its distinctive strength is that it allows one to screen compound libraries that are not available in the lab. Moreover, structure-based (SB) VS also enables an understanding of how the hit compounds bind the protein target, thus laying ground work for the rational hit-to-lead progression. SBVS requires a very limited experimental effort and is particularly well suited for academic labs and small biotech companies that, unlike pharmaceutical companies, do not have physical access to quality small-molecule libraries. Here, we describe SBVS of commercial compound libraries for Mer kinase inhibitors. The screening protocol relies on the docking algorithm Glide complemented by a post-docking filter based on structural protein-ligand interaction fingerprints (SPLIF).

  6. [Graduate Medical Education - Structured, competency based training in Anesthesiology].

    Science.gov (United States)

    Hahnenkamp, Klaus; Wenning, Markus

    2016-07-01

    The "Joint Commission of BDA and DGAI for Graduate Medical Education and Further Education" presents a concept for postgraduate training in anesthesiology. Aiming at a different and demanding generation of young physicians it proposes a new approach to an attractive training in anesthesiology e. g. by simulation as one key concept. It is also intended to meet the guidelines of the German Medical Association of competency based rather than time based or procedure based graduate medical education. A clear structure and the competency based approach shall facilitate a process of professional teaching. The article describes the new concept of graduate medical education by the German Medical Association and the respective aims and objectives of the Scientific Medical Societies in Germany. An existing implementation in a hospital is given as an example of feasibility.

  7. Noise analysis for sensitivity-based structural damage detection

    Institute of Scientific and Technical Information of China (English)

    YIN Tao; ZHU Hong-ping; YU Ling

    2007-01-01

    As vibration-based structural damage detection methods are easily affected by environmental noise, a new statistic-based noise analysis method is proposed together with the Monte Carlo technique to investigate the influence of experimental noise of modal data on sensitivity-based damage detection methods. Different from the commonly used random perturbation technique, the proposed technique is deduced directly by Moore-Penrose generalized inverse of the sensitivity matrix, which does not only make the analysis process more efficient but also can analyze the influence of noise on both frequencies and mode shapes for three commonly used sensitivity-based damage detection methods in a similar way. A one-story portal frame is adopted to evaluate the efficiency of the proposed noise analysis technique.

  8. Prediction of RNA Secondary Structure Based on Particle Swarm Optimization

    Institute of Scientific and Technical Information of China (English)

    LIU Yuan-ning; DONG Hao; ZHANG Hao; WANG Gang; LI Zhi; CHEN Hui-ling

    2011-01-01

    A novel method for the prediction of RNA secondary structure was proposed based on the particle swarm optimization(PSO). PSO is known to be effective in solving many different types of optimization problems and known for being able to approximate the global optimal results in the solution space. We designed an efficient objective function according to the minimum free energy, the number of selected stems and the average length of selected stems. We calculated how many legal stems there were in the sequence, and selected some of them to obtain an optimal result using PSO in the right of the objective function. A method based on the improved particle swarm optimization(IPSO) was proposed to predict RNA secondary structure, which consisted of three stages. The first stage was applied to e ncoding the source sequences, and to exploring all the legal stems. Then, a set of encoded stems were created in order to prepare input data for the second stage. In the second stage, IPSO was responsible for structure selection. At last, the optimal result was obtained from the secondary structures selected via IPSO. Nine sequences from the comparative RNA website were selected for the evaluation of the proposed method. Compared with other six methods, the proposed method decreased the complexity and enhanced the sensitivity and specificity on the basis of the experiment results.

  9. Atomic structures of Zr-based metallic glasses

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The atomic structures of Zr-Ni and Zr-Ti-Al-Cu-Ni metallic glasses were investigated by using classical molecular dynamic (MD),reverse Monte Carlo (RMC),ab initio MD (AIMD) simulations and high resolution transmission electron microscopy (HRTEM) techniques. We focused on the short-range order (SRO) and medium-range order (MRO) in the glassy structure. It is shown that there are icosahedral,FCC-and BCC-type SROs in the Zr-based metallic glasses. A structural model,characterized by imperfect ordered packing (IOP),was proposed based on the MD simulation and confirmed by the HRTEM observation. Furthermore,the evolution from IOP to nanocrystal during the crystallization of metallic glasses was also ex-plored. It is found that the growth from IOP to nanocrystal proceeds through three distinct stages: the formation of quasi-ordered structure with one-dimensional (1D) periodicity,then 2D periodicity,and finally the formation of 3D nanocrystals. It is also noted that these three growth steps are crosslinked.

  10. Atomic structures of Zr-based metallic glasses

    Institute of Scientific and Technical Information of China (English)

    HUI XiDong; LIU Xiongdun; GAO Rui; HOU HuaiYu; FANG HuaZhi; LIU ZiKui; CHEN GuoLiang

    2008-01-01

    The atomic structures of Zr-Ni and Zr-Ti-Al-Cu-Ni metallic glasses were investigated by using classical molecular dynamic (MD), reverse Monte Carlo (RMC), ab initio MD (AIMD) simulations and high resolution transmission electron microscopy (HRTEM) techniques. We focused on the short-range order (SRO) and medium-range order (MRO) in the glassy structure. It is shown that there are icosahedral, FCC- and BCC-type SROs in the Zr-based metallic glasses. A structural model, characterized by imperfect ordered packing (IOP), was proposed based on the MD simulation and confirmed by the HRTEM observation. Furthermore, the evolution from lOP to nanocrystal during the crystallization of metallic glasses was also ex-plored. It is found that the growth from IOP to nanocrystal proceeds through three distinct stages: the formation of quasi-ordered structure with one-dimensional (1 D) periodicity, then 2D periodicity, and finally the formation of 3D nanocrystals. It is also noted that these three growth steps are crosslinked.

  11. Image-Based Structural Modeling of the Cardiac Purkinje Network

    Directory of Open Access Journals (Sweden)

    Benjamin R. Liu

    2015-01-01

    Full Text Available The Purkinje network is a specialized conduction system within the heart that ensures the proper activation of the ventricles to produce effective contraction. Its role during ventricular arrhythmias is less clear, but some experimental studies have suggested that the Purkinje network may significantly affect the genesis and maintenance of ventricular arrhythmias. Despite its importance, few structural models of the Purkinje network have been developed, primarily because current physical limitations prevent examination of the intact Purkinje network. In previous modeling efforts Purkinje-like structures have been developed through either automated or hand-drawn procedures, but these networks have been created according to general principles rather than based on real networks. To allow for greater realism in Purkinje structural models, we present a method for creating three-dimensional Purkinje networks based directly on imaging data. Our approach uses Purkinje network structures extracted from photographs of dissected ventricles and projects these flat networks onto realistic endocardial surfaces. Using this method, we create models for the combined ventricle-Purkinje system that can fully activate the ventricles through a stimulus delivered to the Purkinje network and can produce simulated activation sequences that match experimental observations. The combined models have the potential to help elucidate Purkinje network contributions during ventricular arrhythmias.

  12. Schiff base functionalized Organopropylsilatranes: Synthesis and structural characterization

    Indian Academy of Sciences (India)

    Gurjaspreet Singh; Promila; Amandeep Saroa; Jandeep Singh; Raj Pal Sharm; V Ferretti

    2016-02-01

    Synthesis of Schiff bases linked to organopropylsilatranes were performed by condensation reaction of post-functionalized silatranes such as aminopropylsilatrane (4), aminopropyl-3,7,10-trimethylsilatrane (5) and N-substituted aminopropylsilatrane (10) with two different aldehydes viz. pyrrole-2-carboxaldehyde and 2-hydroxy-1-napthaldehyde. The resulting Schiff base substituted silatranes were well characterized by elemental analysis, spectroscopic studies [IR, (1H, 13C) NMR, and MS]. The structures of two silatranes were confirmed by single crystal X-ray diffraction analysis.

  13. An initial lunar outpost based on deployable inflatable structures

    Science.gov (United States)

    Nozette, Stewart

    1990-01-01

    The Great Exploration Plan (GEP) has been proposed as an alternative approach for achieving the Space Exploration Initiative (SEI) objectives stated by President Bush on 20 Jul. 1989. The GEP is an evolutionary, end-to-end approach for the establishment bases on the Moon and Mars. The GEP deviates from most other proposed SEI architectures by its extensive use of inflatable structures and by its emphasis on Earth-based assembly and test of all components. The following presentation focuses on the design, development and implementation of an inflatable/deployable Lunar outpost as part of the GEP. Programmatic and technical issues associated with this concept are also addressed.

  14. An approximation based global optimization strategy for structural synthesis

    Science.gov (United States)

    Sepulveda, A. E.; Schmit, L. A.

    1991-01-01

    A global optimization strategy for structural synthesis based on approximation concepts is presented. The methodology involves the solution of a sequence of highly accurate approximate problems using a global optimization algorithm. The global optimization algorithm implemented consists of a branch and bound strategy based on the interval evaluation of the objective function and constraint functions, combined with a local feasible directions algorithm. The approximate design optimization problems are constructed using first order approximations of selected intermediate response quantities in terms of intermediate design variables. Some numerical results for example problems are presented to illustrate the efficacy of the design procedure setforth.

  15. Microscopic structure and properties of wood-based foaming composites

    Institute of Scientific and Technical Information of China (English)

    Zheng WANG; Li GAO; Guilan ZHANG; Liang CHANG

    2008-01-01

    In order to reduce the density of wood-based composites without causing a deterioration of their mech-anical properties, we studied the process of manufacturing wood-based composites. A combination of polymer foaming technology and flat hot-pressing technology was used. The microscopic structure of the various wood-based composites was analyzed with a scanning electron microscope (SEM). Modulus of rupture (MOR), modulus of elasticity (MOE), impact strength, and thickness expansion rate of water sorption (TS) were all measured. The results showed that fibers loosely inter-weave, and fibers had been connected by micropore. They also showed that spaces between fibers had big micropore structure. MOR, MOE and impact strength were the high-est among three levels of ratio. When the total content of resin and foaming agent were 20% by weight, TS was higher. A hot-pressing temperature of 120℃ was optimal. At the low temperatures of 80℃, the foaming process was uncompleted. At a higher temperature, micropores burst at a certain pressure. Based on the variance analysis and maximum difference analysis, a significance test shows that the optimum conditions for the total content of resin and foaming agent is 20% by weight, with a hot pressing temperature of 120℃ for 15 min. Under these conditions, the properties of wood-based foaming composites all achieved the industry standard.

  16. Electronic structure of ternary hydrides based on light elements

    Energy Technology Data Exchange (ETDEWEB)

    Orgaz, E. [Departamento de Fisica y Quimica Teorica, Facultad de Quimica, Universidad Nacional Autonoma de Mexico, CP 04510 Coyoacan, Mexico, D.F. (Mexico)]. E-mail: orgaz@eros.pquim.unam.mx; Membrillo, A. [Departamento de Fisica y Quimica Teorica, Facultad de Quimica, Universidad Nacional Autonoma de Mexico, CP 04510 Coyoacan, Mexico, D.F. (Mexico); Castaneda, R. [Departamento de Fisica y Quimica Teorica, Facultad de Quimica, Universidad Nacional Autonoma de Mexico, CP 04510 Coyoacan, Mexico, D.F. (Mexico); Aburto, A. [Departamento de Fisica, Facultad de Ciencias, Universidad Nacional Autonoma de Mexico, CP 04510 Coyoacan, Mexico, D.F. (Mexico)

    2005-12-08

    Ternary hydrides based on light elements are interesting owing to the high available energy density. In this work we focused into the electronic structure of a series of known systems having the general formula AMH{sub 4}(A=Li,Na,M=B,Al). We computed the energy bands and the total and partial density of states using the linear-augmented plane waves method. In this report, we discuss the chemical bonding in this series of complex hydrides.

  17. LTE/MVNO NETWORKS STRUCTURE OPTIMIZATION BASED ON TENSOR DECOMPOSITION

    OpenAIRE

    Strelkovskaya, Iryna; Solovskaya, Iryna

    2015-01-01

    The usage of tensor methods on the decomposition basis is offered for the tasks solution of structure optimization for LTE/MVNO networks mobile communication. The choice problem of optimum topology of e-Node B base stations connectionsin the radio access of E-UTRAN/LTE network was solved. The assessment problem of QoS quality characteristics of complex LTE/MVNO network architecture was solved.

  18. Nonparametric spectral-based estimation of latent structures

    OpenAIRE

    Bonhomme, Stéphane; Jochmans, Koen; Robin, Jean-Marc

    2014-01-01

    We present a constructive identification proof of p-linear decompositions of q-way arrays. The analysis is based on the joint spectral decomposition of a set of matrices. It has applications in the analysis of a variety of latent-structure models, such as q-variate mixtures of p distributions. As such, our results provide a constructive alternative to Allman, Matias and Rhodes [2009]. The identification argument suggests a joint approximate-diagonalization estimator that is easy to implement ...

  19. SABATPG-A Structural Analysis Based Automatic Test Generation System

    Institute of Scientific and Technical Information of China (English)

    李忠诚; 潘榆奇; 闵应骅

    1994-01-01

    A TPG system, SABATPG, is given based on a generic structural model of large circuits. Three techniques of partial implication, aftereffect of identified undetectable faults and shared sensitization with new concepts of localization and aftereffect are employed in the system to improve FAN algorithm. Experiments for the 10 ISCAS benchmark circuits show that the computing time of SABATPG for test generation is 19.42% less than that of FAN algorithm.

  20. SENSITIVITY ANALYSIS BASED ON LANCZOS ALGORITHM IN STRUCTURAL DYNAMICS

    Institute of Scientific and Technical Information of China (English)

    李书; 王波; 胡继忠

    2003-01-01

    The sensitivity calculating formulas in structural dynamics was developed byutilizing the mathematical theorem and new definitions of sensitivities. So the singularityproblem of sensitivity with repeated eigenvalues is solved completely. To improve thecomputational efficiency, the reduction system is obtained based on Lanczos vectors. Afterincorporating the mathematical theory with the Lanczos algorithm, the approximatesensitivity solution can be obtained. A numerical example is presented to illustrate theperformance of the method.

  1. Automated glioblastoma segmentation based on a multiparametric structured unsupervised classification.

    Science.gov (United States)

    Juan-Albarracín, Javier; Fuster-Garcia, Elies; Manjón, José V; Robles, Montserrat; Aparici, F; Martí-Bonmatí, L; García-Gómez, Juan M

    2015-01-01

    Automatic brain tumour segmentation has become a key component for the future of brain tumour treatment. Currently, most of brain tumour segmentation approaches arise from the supervised learning standpoint, which requires a labelled training dataset from which to infer the models of the classes. The performance of these models is directly determined by the size and quality of the training corpus, whose retrieval becomes a tedious and time-consuming task. On the other hand, unsupervised approaches avoid these limitations but often do not reach comparable results than the supervised methods. In this sense, we propose an automated unsupervised method for brain tumour segmentation based on anatomical Magnetic Resonance (MR) images. Four unsupervised classification algorithms, grouped by their structured or non-structured condition, were evaluated within our pipeline. Considering the non-structured algorithms, we evaluated K-means, Fuzzy K-means and Gaussian Mixture Model (GMM), whereas as structured classification algorithms we evaluated Gaussian Hidden Markov Random Field (GHMRF). An automated postprocess based on a statistical approach supported by tissue probability maps is proposed to automatically identify the tumour classes after the segmentations. We evaluated our brain tumour segmentation method with the public BRAin Tumor Segmentation (BRATS) 2013 Test and Leaderboard datasets. Our approach based on the GMM model improves the results obtained by most of the supervised methods evaluated with the Leaderboard set and reaches the second position in the ranking. Our variant based on the GHMRF achieves the first position in the Test ranking of the unsupervised approaches and the seventh position in the general Test ranking, which confirms the method as a viable alternative for brain tumour segmentation.

  2. Automated glioblastoma segmentation based on a multiparametric structured unsupervised classification.

    Directory of Open Access Journals (Sweden)

    Javier Juan-Albarracín

    Full Text Available Automatic brain tumour segmentation has become a key component for the future of brain tumour treatment. Currently, most of brain tumour segmentation approaches arise from the supervised learning standpoint, which requires a labelled training dataset from which to infer the models of the classes. The performance of these models is directly determined by the size and quality of the training corpus, whose retrieval becomes a tedious and time-consuming task. On the other hand, unsupervised approaches avoid these limitations but often do not reach comparable results than the supervised methods. In this sense, we propose an automated unsupervised method for brain tumour segmentation based on anatomical Magnetic Resonance (MR images. Four unsupervised classification algorithms, grouped by their structured or non-structured condition, were evaluated within our pipeline. Considering the non-structured algorithms, we evaluated K-means, Fuzzy K-means and Gaussian Mixture Model (GMM, whereas as structured classification algorithms we evaluated Gaussian Hidden Markov Random Field (GHMRF. An automated postprocess based on a statistical approach supported by tissue probability maps is proposed to automatically identify the tumour classes after the segmentations. We evaluated our brain tumour segmentation method with the public BRAin Tumor Segmentation (BRATS 2013 Test and Leaderboard datasets. Our approach based on the GMM model improves the results obtained by most of the supervised methods evaluated with the Leaderboard set and reaches the second position in the ranking. Our variant based on the GHMRF achieves the first position in the Test ranking of the unsupervised approaches and the seventh position in the general Test ranking, which confirms the method as a viable alternative for brain tumour segmentation.

  3. Transient response of lattice structures based on exact member theory

    Science.gov (United States)

    Anderson, Melvin S.

    1989-01-01

    The computer program BUNVIS-RG, which treats vibration and buckling of lattice structures using exact member stiffness matrices, has been extended to calculate the exact modal mass and stiffness quantities that can be used in a conventional transient response analysis based on modes. The exact nature of the development allows inclusion of local member response without introduction of any interior member nodes. Results are given for several problems in which significant interaction between local and global response occurs.

  4. Crosscumulants Based Approaches for the Structure Identification of Volterra Models

    Institute of Scientific and Technical Information of China (English)

    Houda Mathlouthi; Kamel Abederrahim; Faouzi Msahli; Gerard Favier

    2009-01-01

    In this paper, we address the problem of structure identification of Volterra models. It consists in estimating the model order and the memory lcngth of each kernel. Two methods based on input-output crosscumulants arc developed. The first one uses zero mean independent and identically distributed Ganssian input, and the second one concerns a symmetric input sequence. Simulations are performed on six models having different orders and kernel memory lengths to demonstrate the advantages of the proposed methods.

  5. Pore- and micro-structural characterization of a novel structural binder based on iron carbonation

    Energy Technology Data Exchange (ETDEWEB)

    Das, Sumanta, E-mail: Sumanta.Das@asu.edu [School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ (United States); Stone, David, E-mail: dajstone@gmail.com [Iron Shell LLC, Tucson, AZ (United States); Convey, Diana, E-mail: Diana.Convey@asu.edu [LeRoy Eyring Center for Solid State Science, Arizona State University, Tempe, AZ (United States); Neithalath, Narayanan, E-mail: Narayanan.Neithalath@asu.edu [School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ (United States)

    2014-12-15

    The pore- and micro-structural features of a novel binding material based on the carbonation of waste metallic iron powder are reported in this paper. The binder contains metallic iron powder as the major ingredient, followed by additives containing silica and alumina to facilitate favorable reaction product formation. Compressive strengths sufficient for a majority of concrete applications are attained. The material pore structure is investigated primarily through mercury intrusion porosimetry whereas electron microscopy is used for microstructural characterization. Reduction in the overall porosity and the average pore size with an increase in carbonation duration from 1 day to 4 days is noticed. The pore structure features are used in predictive models for gas and moisture transport (water vapor diffusivity and moisture permeability) through the porous medium which dictates its long-term durability when used in structural applications. Comparisons of the pore structure with those of a Portland cement paste are also provided. The morphology of the reaction products in the iron-based binder, and the distribution of constituent elements in the microstructure are also reported. - Highlights: • Carbonation of iron produces a dense microstructure. • Pore volume in iron carbonate lower, critical size higher than those in OPC pastes • Reaction product contains iron, carbon, silicon, aluminum and calcium. • Power-law for porosity-moisture permeability relationship was established.

  6. Aircraft wing structural design optimization based on automated finite element modelling and ground structure approach

    Science.gov (United States)

    Yang, Weizhu; Yue, Zhufeng; Li, Lei; Wang, Peiyan

    2016-01-01

    An optimization procedure combining an automated finite element modelling (AFEM) technique with a ground structure approach (GSA) is proposed for structural layout and sizing design of aircraft wings. The AFEM technique, based on CATIA VBA scripting and PCL programming, is used to generate models automatically considering the arrangement of inner systems. GSA is used for local structural topology optimization. The design procedure is applied to a high-aspect-ratio wing. The arrangement of the integral fuel tank, landing gear and control surfaces is considered. For the landing gear region, a non-conventional initial structural layout is adopted. The positions of components, the number of ribs and local topology in the wing box and landing gear region are optimized to obtain a minimum structural weight. Constraints include tank volume, strength, buckling and aeroelastic parameters. The results show that the combined approach leads to a greater weight saving, i.e. 26.5%, compared with three additional optimizations based on individual design approaches.

  7. Microscopic neural image registration based on the structure of mitochondria

    Science.gov (United States)

    Cao, Huiwen; Han, Hua; Rao, Qiang; Xiao, Chi; Chen, Xi

    2017-02-01

    Microscopic image registration is a key component of the neural structure reconstruction with serial sections of neural tissue. The goal of microscopic neural image registration is to recover the 3D continuity and geometrical properties of specimen. During image registration, various distortions need to be corrected, including image rotation, translation, tissue deformation et.al, which come from the procedure of sample cutting, staining and imaging. Furthermore, there is only certain similarity between adjacent sections, and the degree of similarity depends on local structure of the tissue and the thickness of the sections. These factors make the microscopic neural image registration a challenging problem. To tackle the difficulty of corresponding landmarks extraction, we introduce a novel image registration method for Scanning Electron Microscopy (SEM) images of serial neural tissue sections based on the structure of mitochondria. The ellipsoidal shape of mitochondria ensures that the same mitochondria has similar shape between adjacent sections, and its characteristic of broad distribution in the neural tissue guarantees that landmarks based on the mitochondria distributed widely in the image. The proposed image registration method contains three parts: landmarks extraction between adjacent sections, corresponding landmarks matching and image deformation based on the correspondences. We demonstrate the performance of our method with SEM images of drosophila brain.

  8. Defect classification in sparsity-based structural health monitoring

    Science.gov (United States)

    Golato, Andrew; Ahmad, Fauzia; Santhanam, Sridhar; Amin, Moeness G.

    2017-05-01

    Guided waves have gained popularity in structural health monitoring (SHM) due to their ability to inspect large areas with little attenuation, while providing rich interactions with defects. For thin-walled structures, the propagating waves are Lamb waves, which are a complex but well understood type of guided waves. Recent works have cast the defect localization problem of Lamb wave based SHM within the sparse reconstruction framework. These methods make use of a linear model relating the measurements with the scene reflectivity under the assumption of point-like defects. However, most structural defects are not perfect points but tend to assume specific forms, such as surface cracks or internal cracks. Knowledge of the "type" of defects is useful in the assessment phase of SHM. In this paper, we present a dual purpose sparsity-based imaging scheme which, in addition to accurately localizing defects, properly classifies the defects present simultaneously. The proposed approach takes advantage of the bias exhibited by certain types of defects toward a specific Lamb wave mode. For example, some defects strongly interact with the anti-symmetric modes, while others strongly interact with the symmetric modes. We build model based dictionaries for the fundamental symmetric and anti-symmetric wave modes, which are then utilized in unison to properly localize and classify the defects present. Simulated data of surface and internal defects in a thin Aluminum plate are used to validate the proposed scheme.

  9. Structure-based molecular modeling approaches to GPCR oligomerization.

    Science.gov (United States)

    Kaczor, Agnieszka A; Selent, Jana; Poso, Antti

    2013-01-01

    Classical structure-based drug design techniques using G-protein-coupled receptors (GPCRs) as targets focus nearly exclusively on binding at the orthosteric site of a single receptor. Dimerization and oligomerization of GPCRs, proposed almost 30 years ago, have, however, crucial relevance for drug design. Targeting these complexes selectively or designing small molecules that affect receptor-receptor interactions might provide new opportunities for novel drug discovery. In order to study the mechanisms and dynamics that rule GPCRs oligomerization, it is essential to understand the dynamic process of receptor-receptor association and to identify regions that are suitable for selective drug binding, which may be determined with experimental methods such as Förster resonance energy transfer (FRET) or Bioluminescence resonance energy transfer (BRET) and computational sequence- and structure-based approaches. The aim of this chapter is to provide a comprehensive description of the structure-based molecular modeling methods for studying GPCR dimerization, that is, protein-protein docking, molecular dynamics, normal mode analysis, and electrostatics studies.

  10. Fragment approaches in structure-based drug discovery

    Energy Technology Data Exchange (ETDEWEB)

    Hubbard, Roderick E., E-mail: rod@ysbl.york.ac.uk [Vernalis R& D Ltd and University of York (United Kingdom)

    2008-05-01

    Fragment-based methods are successfully generating novel and selective drug-like inhibitors of protein targets, with a number of groups reporting compounds entering clinical trials. This paper summarizes the key features of the approach as one of the tools in structure-guided drug discovery. There has been considerable interest recently in what is known as 'fragment-based lead discovery'. The novel feature of the approach is to begin with small low-affinity compounds. The main advantage is that a larger potential chemical diversity can be sampled with fewer compounds, which is particularly important for new target classes. The approach relies on careful design of the fragment library, a method that can detect binding of the fragment to the protein target, determination of the structure of the fragment bound to the target, and the conventional use of structural information to guide compound optimization. In this article the methods are reviewed, and experiences in fragment-based discovery of lead series of compounds against kinases such as PDK1 and ATPases such as Hsp90 are discussed. The examples illustrate some of the key benefits and issues of the approach and also provide anecdotal examples of the patterns seen in selectivity and the binding mode of fragments across different protein targets.

  11. Road Network Selection Based on Road Hierarchical Structure Control

    Directory of Open Access Journals (Sweden)

    HE Haiwei

    2015-04-01

    Full Text Available A new road network selection method based on hierarchical structure is studied. Firstly, road network is built as strokes which are then classified into hierarchical collections according to the criteria of betweenness centrality value (BC value. Secondly, the hierarchical structure of the strokes is enhanced using structural characteristic identification technique. Thirdly, the importance calculation model was established according to the relationships among the hierarchical structure of the strokes. Finally, the importance values of strokes are got supported with the model's hierarchical calculation, and with which the road network is selected. Tests are done to verify the advantage of this method by comparing it with other common stroke-oriented methods using three kinds of typical road network data. Comparision of the results show that this method had few need to semantic data, and could eliminate the negative influence of edge strokes caused by the criteria of BC value well. So, it is better to maintain the global hierarchical structure of road network, and suitable to meet with the selection of various kinds of road network at the same time.

  12. Gene function prediction based on the Gene Ontology hierarchical structure.

    Science.gov (United States)

    Cheng, Liangxi; Lin, Hongfei; Hu, Yuncui; Wang, Jian; Yang, Zhihao

    2014-01-01

    The information of the Gene Ontology annotation is helpful in the explanation of life science phenomena, and can provide great support for the research of the biomedical field. The use of the Gene Ontology is gradually affecting the way people store and understand bioinformatic data. To facilitate the prediction of gene functions with the aid of text mining methods and existing resources, we transform it into a multi-label top-down classification problem and develop a method that uses the hierarchical relationships in the Gene Ontology structure to relieve the quantitative imbalance of positive and negative training samples. Meanwhile the method enhances the discriminating ability of classifiers by retaining and highlighting the key training samples. Additionally, the top-down classifier based on a tree structure takes the relationship of target classes into consideration and thus solves the incompatibility between the classification results and the Gene Ontology structure. Our experiment on the Gene Ontology annotation corpus achieves an F-value performance of 50.7% (precision: 52.7% recall: 48.9%). The experimental results demonstrate that when the size of training set is small, it can be expanded via topological propagation of associated documents between the parent and child nodes in the tree structure. The top-down classification model applies to the set of texts in an ontology structure or with a hierarchical relationship.

  13. Computational challenges of structure-based approaches applied to HIV.

    Science.gov (United States)

    Forli, Stefano; Olson, Arthur J

    2015-01-01

    Here, we review some of the opportunities and challenges that we face in computational modeling of HIV therapeutic targets and structural biology, both in terms of methodology development and structure-based drug design (SBDD). Computational methods have provided fundamental support to HIV research since the initial structural studies, helping to unravel details of HIV biology. Computational models have proved to be a powerful tool to analyze and understand the impact of mutations and to overcome their structural and functional influence in drug resistance. With the availability of structural data, in silico experiments have been instrumental in exploiting and improving interactions between drugs and viral targets, such as HIV protease, reverse transcriptase, and integrase. Issues such as viral target dynamics and mutational variability, as well as the role of water and estimates of binding free energy in characterizing ligand interactions, are areas of active computational research. Ever-increasing computational resources and theoretical and algorithmic advances have played a significant role in progress to date, and we envision a continually expanding role for computational methods in our understanding of HIV biology and SBDD in the future.

  14. Reliability-Based Optimal Design for Very Large Floating Structure

    Institute of Scientific and Technical Information of China (English)

    ZHANG Shu-hua(张淑华); FUJIKUBO Masahiko

    2003-01-01

    Costs and losses induced by possible future extreme environmental conditions and difficulties in repairing post-yielding damage strongly suggest the need for proper consideration in design rather than just life loss prevention. This can be addressed through the development of design methodology that balances the initial cost of the very large floating structure (VLFS) against the expected potential losses resulting from future extreme wave-induced structural damage. Here, the development of a methodology for determining optimal, cost-effective design will be presented and applied to a VLFS located in the Tokyo bay. Optimal design criteria are determined based on the total expected life-cycle cost and acceptable damage probability and curvature of the structure, and a set of sizes of the structure are obtained. The methodology and applications require expressions of the initial cost and the expected life-cycle damage cost as functions of the optimal design variables. This study includes the methodology, total life-cycle cost function, structural damage modeling, and reliability analysis.

  15. Frequency Response Function Based Damage Identification for Aerospace Structures

    Science.gov (United States)

    Oliver, Joseph Acton

    Structural health monitoring technologies continue to be pursued for aerospace structures in the interests of increased safety and, when combined with health prognosis, efficiency in life-cycle management. The current dissertation develops and validates damage identification technology as a critical component for structural health monitoring of aerospace structures and, in particular, composite unmanned aerial vehicles. The primary innovation is a statistical least-squares damage identification algorithm based in concepts of parameter estimation and model update. The algorithm uses frequency response function based residual force vectors derived from distributed vibration measurements to update a structural finite element model through statistically weighted least-squares minimization producing location and quantification of the damage, estimation uncertainty, and an updated model. Advantages compared to other approaches include robust applicability to systems which are heavily damped, large, and noisy, with a relatively low number of distributed measurement points compared to the number of analytical degrees-of-freedom of an associated analytical structural model (e.g., modal finite element model). Motivation, research objectives, and a dissertation summary are discussed in Chapter 1 followed by a literature review in Chapter 2. Chapter 3 gives background theory and the damage identification algorithm derivation followed by a study of fundamental algorithm behavior on a two degree-of-freedom mass-spring system with generalized damping. Chapter 4 investigates the impact of noise then successfully proves the algorithm against competing methods using an analytical eight degree-of-freedom mass-spring system with non-proportional structural damping. Chapter 5 extends use of the algorithm to finite element models, including solutions for numerical issues, approaches for modeling damping approximately in reduced coordinates, and analytical validation using a composite

  16. Structured Language Requirement Elicitation Using Case Base Reasoning

    Directory of Open Access Journals (Sweden)

    Marryam Murtaza

    2013-12-01

    Full Text Available Requirement elicitation is very difficult process in highly challenging and business based software as well as in real time software. Common problems associated with these types of software are rapidly changing the requirements and understanding the language of the layman person. In this study, a framework for requirement elicitation by using knowledge based system is proposed, which is very helpful for knowledge documentation, intelligent decision support, self-learning and more specifically it is very helpful for case based reasoning and explanation. Basically in this method requirements are gathered from Artificial Intelligence (AI expert system from various sources e.g., via interviews, scenarios or use cases. Then, these are converted into structured natural language using ontology and this new problem/case is put forward to Case Based Reasoning (CBR. CBR based on its previous information having similar requirements combines with new case and suggests a proposed solution. Based on this solution a prototype is developed and delivered to customer. The use of case-based reasoning in requirements elicitation process has greatly reduced the burden and saved time of requirement analyst and results in an effective solution for handling complex or vague requirements during the elicitation process.

  17. Adaptive base-isolation of civil structures using variable amplification

    Institute of Scientific and Technical Information of China (English)

    Kenneth K. Walsh; Makola M. Abdullah

    2006-01-01

    Semi-active dampers are used in base-isolation to reduce the seismic response of civil engineering structures.In the present study, a new semi-active damping system using variable amplification will be investigated for adaptive baseisolation. It uses a novel variable amplification device (VAD) connected in series with a passive damper. The VAD is capable of producing multiple amplification factors, each corresponding to a different amplification state. Forces from the damper are amplified to the structure according to the current amplification state, which is selected via a semi-active control algorithm specifically tailored to the system's unique damping characteristics. To demonstrate the effectiveness of the VAD-damper system for adaptive base-isolation, numerical simulations are conducted for three and seven-story base-isolated buildings subject to both far and near-field ground motions. The results indicate that the system can achieve significant reductions in response compared to the base-isolated buildings with no damper. The proposed system is also found to perform well compared to a typical semi-active damper.

  18. Deep structure of Eastern part of Bandung Basin based on 2D resistivity structure

    Science.gov (United States)

    Harja, Asep

    2013-09-01

    Bandung basin is an intramontane basin located in West Java, extending from west to east along 35 km and north to south along 15 km distance, with elevation of 660-680 m. The plain in the eastern part is the basin center with lake deposit as primary sediment filling the basin. Investigation of the subsurface structure and thickness of the basin is the main topic in this research. Beside the deeper structure of the basin, the shallow structure is also very important to be revealed since human activities are concentrated in this part. The latter is supposed to explain phenomenon related to the flood and drought that frequently occur in the area. Controlled-source audio-frequency magneto telluric (CSAMT) is a highly effective electromagnetic (EM) method to deploy in this area. Its robustness toward electromagnetic noises related to human and industrial activities particularly in the eastern part of the basin is the strong point of this method. It uses a grounded horizontal electric dipole as artificial source of electromagnetic signal that ensures data with a high signal to noise (S/N) ratio. This method is capable to map subsurface resistivity structure with high sensitivity to resistivity contras and deeper penetration. 1D inversion scheme was used to the far-field component of CSAMT data (plane wave assumption) in order to obtain resistivity cross-sections that are more suitable with the basin's structure complexity. The results show that until the depth of more than 200 m, no high resistivity structure is found. This unlikely indicated the presence of volcanic rocks beneath the area. The subsurface resistivity distribution is dominated by tens of Om, indicating that the basement comprises deep marine sediment. In addition, clay lens are also indicated in the resulting resistivity structure. Based on 2D view of resistivity cross-sections based 1D inverted and 2D inversion, it is found that a low resistivity elongation extends in southeast-northwest direction at

  19. Coupled-cavity-based slow light metamaterials with antireflection structures

    Science.gov (United States)

    Lee, Sun-Goo; Kim, Seong-Han; Jung, Soo-Yong; Lee, Jongjin; Park, Jong-Moon; Kee, Chul-Sik

    2016-11-01

    A slow light metamaterial based on a coupled Fabry-Pérot cavity is proposed and numerically studied using finite-difference time-domain simulations. The coupled cavity-based slow light metamaterial is composed of a periodic array of partial mirrors with low transmittance, i.e., thin metal films perforated with a subwavelength hole array. The tight-binding model is employed to investigate the transmission properties of the coupled-cavity-based metamaterial. It is shown that the group velocities of the slowly propagating modes can be controlled by adjusting the radius of holes in the mirrors. We also show that undesirable reflections at the boundaries of the finite-size metamaterial can be minimized by introducing optimized antireflection structures.

  20. EM Structure-Based Accelerators Working Group Summary

    Science.gov (United States)

    Kimura, W. D.; Lidia, S. M.

    2004-12-01

    This Working Group (WG) focused on EM Structure-Based Accelerators, which covers a broad area of mechanisms and experiments. Topics covered included dielectric wakefield accelerators (DWA), photonic bandgap accelerators (PBGA), inverse free electron lasers (IFEL), vacuum laser accelerators (VLA), other novel schemes, and supporting analysis and modeling. In addition, this WG was tasked at the Workshop with developing conceptual (strawman) designs for a 1-GeV accelerator system based upon any of the experimentally-proven approaches covered in this WG. Two strawmen designs were developed based upon IFELs and DWAs. The presentations given and strawmen designs indicate great progress has been made in many areas. Proof-of-principle experiments will occur shortly in PBGA and VLA. Other well-proven devices, such as IFELs, are becoming accepted as "workhorse" providers of microbunches.

  1. Advanced instrumentation for acousto-ultrasonic based structural health monitoring

    Science.gov (United States)

    Smithard, Joel; Galea, Steve; van der Velden, Stephen; Powlesland, Ian; Jung, George; Rajic, Nik

    2016-04-01

    Structural health monitoring (SHM) systems using structurally-integrated sensors potentially allow the ability to inspect for damage in aircraft structures on-demand and could provide a basis for the development of condition-based maintenance approaches for airframes. These systems potentially offer both substantial cost savings and performance improvements over conventional nondestructive inspection (NDI). Acousto-ultrasonics (AU), using structurallyintegrated piezoelectric transducers, offers a promising basis for broad-field damage detection in aircraft structures. For these systems to be successfully applied in the field the hardware for AU excitation and interrogation needs to be easy to use, compact, portable, light and, electrically and mechanically robust. Highly flexible and inexpensive instrumentation for basic background laboratory investigations is also required to allow researchers to tackle the numerous scientific and engineering issues associated with AU based SHM. The Australian Defence Science and Technology Group (DST Group) has developed the Acousto Ultrasonic Structural health monitoring Array Module (AUSAM+), a compact device for AU excitation and interrogation. The module, which has the footprint of a typical current generation smart phone, provides autonomous control of four send and receive piezoelectric elements, which can operate in pitch-catch or pulse-echo modes and can undertake electro-mechanical impedance measurements for transducer and structural diagnostics. Modules are designed to operate synchronously with other units, via an optical link, to accommodate larger transducer arrays. The module also caters for fibre optic sensing of acoustic waves with four intensity-based optical inputs. Temperature and electrical resistance strain gauge inputs as well as external triggering functionality are also provided. The development of a Matlab hardware object allows users to easily access the full hardware functionality of the device and

  2. Visualization of Link Structures and URL Retrievals Utilizing Internal Structure of URLs Based on Brunch and Bound Algorithms

    Directory of Open Access Journals (Sweden)

    Kohei Arai

    2012-11-01

    Full Text Available Method for visualization of URL link structure and URL retrievals using internal structure of URLs based on brunch and bound method is proposed. Twisting link structure of URLs can be solved by the proposed visualization method. Also some improvements are observed for the proposed brunch and bound based method in comparison to the conventional URL retrieval methods.

  3. FRF-based structural damage detection of controlled buildings with podium structures: Experimental investigation

    Science.gov (United States)

    Xu, Y. L.; Huang, Q.; Zhan, S.; Su, Z. Q.; Liu, H. J.

    2014-06-01

    How to use control devices to enhance system identification and damage detection in relation to a structure that requires both vibration control and structural health monitoring is an interesting yet practical topic. In this study, the possibility of using the added stiffness provided by control devices and frequency response functions (FRFs) to detect damage in a building complex was explored experimentally. Scale models of a 12-storey main building and a 3-storey podium structure were built to represent a building complex. Given that the connection between the main building and the podium structure is most susceptible to damage, damage to the building complex was experimentally simulated by changing the connection stiffness. To simulate the added stiffness provided by a semi-active friction damper, a steel circular ring was designed and used to add the related stiffness to the building complex. By varying the connection stiffness using an eccentric wheel excitation system and by adding or not adding the circular ring, eight cases were investigated and eight sets of FRFs were measured. The experimental results were used to detect damage (changes in connection stiffness) using a recently proposed FRF-based damage detection method. The experimental results showed that the FRF-based damage detection method could satisfactorily locate and quantify damage.

  4. DNA nanotechnology based on i-motif structures.

    Science.gov (United States)

    Dong, Yuanchen; Yang, Zhongqiang; Liu, Dongsheng

    2014-06-17

    CONSPECTUS: Most biological processes happen at the nanometer scale, and understanding the energy transformations and material transportation mechanisms within living organisms has proved challenging. To better understand the secrets of life, researchers have investigated artificial molecular motors and devices over the past decade because such systems can mimic certain biological processes. DNA nanotechnology based on i-motif structures is one system that has played an important role in these investigations. In this Account, we summarize recent advances in functional DNA nanotechnology based on i-motif structures. The i-motif is a DNA quadruplex that occurs as four stretches of cytosine repeat sequences form C·CH(+) base pairs, and their stabilization requires slightly acidic conditions. This unique property has produced the first DNA molecular motor driven by pH changes. The motor is reliable, and studies show that it is capable of millisecond running speeds, comparable to the speed of natural protein motors. With careful design, the output of these types of motors was combined to drive micrometer-sized cantilevers bend. Using established DNA nanostructure assembly and functionalization methods, researchers can easily integrate the motor within other DNA assembled structures and functional units, producing DNA molecular devices with new functions such as suprahydrophobic/suprahydrophilic smart surfaces that switch, intelligent nanopores triggered by pH changes, molecular logic gates, and DNA nanosprings. Recently, researchers have produced motors driven by light and electricity, which have allowed DNA motors to be integrated within silicon-based nanodevices. Moreover, some devices based on i-motif structures have proven useful for investigating processes within living cells. The pH-responsiveness of the i-motif structure also provides a way to control the stepwise assembly of DNA nanostructures. In addition, because of the stability of the i-motif, this

  5. Factors influencing protein tyrosine nitration--structure-based predictive models.

    Science.gov (United States)

    Bayden, Alexander S; Yakovlev, Vasily A; Graves, Paul R; Mikkelsen, Ross B; Kellogg, Glen E

    2011-03-15

    Models for exploring tyrosine nitration in proteins have been created based on 3D structural features of 20 proteins for which high-resolution X-ray crystallographic or NMR data are available and for which nitration of 35 total tyrosines has been experimentally proven under oxidative stress. Factors suggested in previous work to enhance nitration were examined with quantitative structural descriptors. The role of neighboring acidic and basic residues is complex: for the majority of tyrosines that are nitrated the distance to the heteroatom of the closest charged side chain corresponds to the distance needed for suspected nitrating species to form hydrogen bond bridges between the tyrosine and that charged amino acid. This suggests that such bridges play a very important role in tyrosine nitration. Nitration is generally hindered for tyrosines that are buried and for those tyrosines for which there is insufficient space for the nitro group. For in vitro nitration, closed environments with nearby heteroatoms or unsaturated centers that can stabilize radicals are somewhat favored. Four quantitative structure-based models, depending on the conditions of nitration, have been developed for predicting site-specific tyrosine nitration. The best model, relevant for both in vitro and in vivo cases, predicts 30 of 35 tyrosine nitrations (positive predictive value) and has a sensitivity of 60/71 (11 false positives). Copyright © 2010 Elsevier Inc. All rights reserved.

  6. Group III-nitride based hetero and quantum structures

    Science.gov (United States)

    Monemar, B.; Pozina, G.

    2000-11-01

    The present paper attempts an overview of a presently very active research field: the III-nitrides and their interesting possibilities for a range of device applications employing heterostructures and low-dimensional quantum structures. The family of materials containing AlN, GaN, InN and the alloys between them span a range of direct bandgaps between 6.2 and 1.9 eV, with very large band offsets in type I heterojunctions, which is very favourable for a number of interesting device concepts. A very important feature of these materials is the dominant influence of strong polarisation fields (spontaneous as well as piezo-electric) on the physical properties of multilayer structures, as well as on devices. Exciton binding energies are large, and excitonic effects are therefore important at room temperature. Many alloy systems, in particular InGaN, have a high miscibility gap, leading to a strong tendency for phase separation and consequently to many novel physical properties which yet have to be explored in detail. Localization effects for carriers and excitons are very important in quantum structures based on these alloys. Devices based on III-N heterostructures cover a wide range, from optical devices (violet lasers, LEDs covering a range from UV to red, white LEDs, photodetectors, UV cameras) to high-frequency power devices, both unipolar transistors (AlGaN/GaN HEMTs) and bipolar HBTs.

  7. Nanodevices based on Membrane-Carbon Nanotube Hybrid Structures

    Science.gov (United States)

    Jin, Hye Jun; Kim, Tae Hyun; Namgung, Seon; Hong, Seunghun; Lee, Sang Hun; Park, Tai Hyun

    2010-03-01

    Proteins in cell membrane have been drawing attention due to their versatile functionalities such as ion transfer for neuronal activity and selective binding for sensory systems. However, it is still very difficult to manipulate and study those proteins because they easily lose their functionalities without lipid membranes. We developed a method to coat lipid membranes containing various functional membrane proteins on single-walled carbon nanotube (swCNT)-based field effect transistors (FETs). In this hybrid structure, the activity of membrane proteins can be monitored by underlying swCNT-FETs, allowing us to easily study the functionalities of membrane proteins. Furthermore, we built advanced devices based on these hybrid structures. For an example, we coated lipid membrane containing `olfactory receptors' on swCNT-FETs, resulting in `bioelectric nose' systems. The bioelectric nose system had high sensitivity and human nose-like selectivity to odorant molecules. This talk will also discuss about the future prospect of these membrane-CNT hybrid structures.

  8. Structural analysis of paintings based on brush strokes

    Science.gov (United States)

    Sablatnig, Robert; Kammerer, Paul; Zolda, Ernestine

    1998-05-01

    The origin of works of art can often not be attributed to a certain artist. Likewise it is difficult to say whether paintings or drawings are originals or forgeries. In various fields of art new technical methods are used to examine the age, the state of preservation and the origin of the materials used. For the examination of paintings, radiological methods like X-ray and infra-red diagnosis, digital radiography, computer-tomography, etc. and color analyzes are employed to authenticate art. But all these methods do not relate certain characteristics in art work to a specific artist -- the artist's personal style. In order to study this personal style of a painter, experts in art history and image processing try to examine the 'structural signature' based on brush strokes within paintings, in particular in portrait miniatures. A computer-aided classification and recognition system for portrait miniatures is developed, which enables a semi- automatic classification and forgery detection based on content, color, and brush strokes. A hierarchically structured classification scheme is introduced which separates the classification into three different levels of information: color, shape of region, and structure of brush strokes.

  9. Structural level characterization of base oils using advanced analytical techniques

    KAUST Repository

    Hourani, Nadim

    2015-05-21

    Base oils, blended for finished lubricant formulations, are classified by the American Petroleum Institute into five groups, viz., groups I-V. Groups I-III consist of petroleum based hydrocarbons whereas groups IV and V are made of synthetic polymers. In the present study, five base oil samples belonging to groups I and III were extensively characterized using high performance liquid chromatography (HPLC), comprehensive two-dimensional gas chromatography (GC×GC), and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) equipped with atmospheric pressure chemical ionization (APCI) and atmospheric pressure photoionization (APPI) sources. First, the capabilities and limitations of each analytical technique were evaluated, and then the availed information was combined to reveal compositional details on the base oil samples studied. HPLC showed the overwhelming presence of saturated over aromatic compounds in all five base oils. A similar trend was further corroborated using GC×GC, which yielded semiquantitative information on the compound classes present in the samples and provided further details on the carbon number distributions within these classes. In addition to chromatography methods, FT-ICR MS supplemented the compositional information on the base oil samples by resolving the aromatics compounds into alkyl- and naphtheno-subtituted families. APCI proved more effective for the ionization of the highly saturated base oil components compared to APPI. Furthermore, for the detailed information on hydrocarbon molecules FT-ICR MS revealed the presence of saturated and aromatic sulfur species in all base oil samples. The results presented herein offer a unique perspective into the detailed molecular structure of base oils typically used to formulate lubricants. © 2015 American Chemical Society.

  10. Table of periodic properties of fullerenes based on structural parameters.

    Science.gov (United States)

    Torrens, Francisco

    2004-01-01

    The periodic table (PT) of the elements suggests that hydrogen could be the origin of everything else. The construction principle is an evolutionary process that is formally similar to those of Darwin and Oparin. The Kekulé structure count and permanence of the adjacency matrix of fullerenes are related to structural parameters involving the presence of contiguous pentagons p, q and r. Let p be the number of edges common to two pentagons, q the number of vertices common to three pentagons, and r the number of pairs of nonadjacent pentagon edges shared between two other pentagons. Principal component analysis (PCA) of the structural parameters and cluster analysis (CA) of the fullerenes permit classifying them and agree. A PT of the fullerenes is built based on the structural parameters, PCA and CA. The periodic law does not have the rank of the laws of physics. (1) The properties of the fullerenes are not repeated; only, and perhaps, their chemical character. (2) The order relationships are repeated, although with exceptions. The proposed statement is the following: The relationships that any fullerene p has with its neighbor p + 1 are approximately repeated for each period.

  11. Ultrasonic wave-based structural health monitoring embedded instrument

    Energy Technology Data Exchange (ETDEWEB)

    Aranguren, G.; Monje, P. M., E-mail: pedromaria.monje@ehu.es [Electronic Design Group, Faculty of Engineering of Bilbao, University of the Basque Country, Bilbao (Spain); Cokonaj, Valerijan [AERnnova Engineering Solutions Ibérica S.A., Madrid (Spain); Barrera, Eduardo; Ruiz, Mariano [Instrumentation and Applied Acoustic Research Group of the Technical University of Madrid, Madrid (Spain)

    2013-12-15

    Piezoelectric sensors and actuators are the bridge between electronic and mechanical systems in structures. This type of sensor is a key element in the integrity monitoring of aeronautic structures, bridges, pressure vessels, wind turbine blades, and gas pipelines. In this paper, an all-in-one system for Structural Health Monitoring (SHM) based on ultrasonic waves is presented, called Phased Array Monitoring for Enhanced Life Assessment. This integrated instrument is able to generate excitation signals that are sent through piezoelectric actuators, acquire the received signals in the piezoelectric sensors, and carry out signal processing to check the health of structures. To accomplish this task, the instrument uses a piezoelectric phased-array transducer that performs the actuation and sensing of the signals. The flexibility and strength of the instrument allow the user to develop and implement a substantial part of the SHM technique using Lamb waves. The entire system is controlled using configuration software and has been validated through functional, electrical loading, mechanical loading, and thermal loading resistance tests.

  12. Ultrasonic wave-based structural health monitoring embedded instrument.

    Science.gov (United States)

    Aranguren, G; Monje, P M; Cokonaj, Valerijan; Barrera, Eduardo; Ruiz, Mariano

    2013-12-01

    Piezoelectric sensors and actuators are the bridge between electronic and mechanical systems in structures. This type of sensor is a key element in the integrity monitoring of aeronautic structures, bridges, pressure vessels, wind turbine blades, and gas pipelines. In this paper, an all-in-one system for Structural Health Monitoring (SHM) based on ultrasonic waves is presented, called Phased Array Monitoring for Enhanced Life Assessment. This integrated instrument is able to generate excitation signals that are sent through piezoelectric actuators, acquire the received signals in the piezoelectric sensors, and carry out signal processing to check the health of structures. To accomplish this task, the instrument uses a piezoelectric phased-array transducer that performs the actuation and sensing of the signals. The flexibility and strength of the instrument allow the user to develop and implement a substantial part of the SHM technique using Lamb waves. The entire system is controlled using configuration software and has been validated through functional, electrical loading, mechanical loading, and thermal loading resistance tests.

  13. Carbon Nanotube-Based Structural Health Monitoring Sensors

    Science.gov (United States)

    Wincheski, Russell; Jordan, Jeffrey; Oglesby, Donald; Watkins, Anthony; Patry, JoAnne; Smits, Jan; Williams, Phillip

    2011-01-01

    Carbon nanotube (CNT)-based sensors for structural health monitoring (SHM) can be embedded in structures of all geometries to monitor conditions both inside and at the surface of the structure to continuously sense changes. These CNTs can be manipulated into specific orientations to create small, powerful, and flexible sensors. One of the sensors is a highly flexible sensor for crack growth detection and strain field mapping that features a very dense and highly ordered array of single-walled CNTs. CNT structural health sensors can be mass-produced, are inexpensive, can be packaged in small sizes (0.5 micron(sup 2)), require less power than electronic or piezoelectric transducers, and produce less waste heat per square centimeter than electronic or piezoelectric transducers. Chemically functionalized lithographic patterns are used to deposit and align the CNTs onto metallic electrodes. This method consistently produces aligned CNTs in the defined locations. Using photo- and electron-beam lithography, simple Cr/Au thin-film circuits are patterned onto oxidized silicon substrates. The samples are then re-patterned with a CNT-attracting, self-assembled monolayer of 3-aminopropyltriethoxysilane (APTES) to delineate the desired CNT locations between electrodes. During the deposition of the solution-suspended single- wall CNTs, the application of an electric field to the metallic contacts causes alignment of the CNTs along the field direction. This innovation is a prime candidate for smart skin technologies with applications ranging from military, to aerospace, to private industry.

  14. A Novel SMA-based Concept for Airfoil Structural Morphing

    Science.gov (United States)

    Barbarino, S.; Pecora, R.; Lecce, L.; Concilio, A.; Ameduri, S.; Calvi, E.

    2009-08-01

    The adaptive structures concept is of great interest in the aerospace field because of the several benefits which can be accomplished in the fields including noise reduction, load alleviation, weight reduction, etc., at a level in which they can be considered as compulsory in the design of future aircraft. Improvements in terms of the aerodynamic efficiency, aeroelastic behavior, stability, and manoeuvrability performance have already been proved through many international studies in the past. In the family of the Smart Materials, Shape Memory Alloys (SMA) seem to be a suitable solution for many static applications. Their high structural integrability in conjunction with actuation capabilities and a favorable performance per weight ratio, allows the development of original architectures. In this study, a morphing wing trailing edge concept is presented; morphing ability was introduced with the aim of replacing a conventional flap device. A compliant rib structure was designed, based on SMA actuators exhibiting structural potential (bearing external aerodynamic loads). Numerical results, achieved through a FE approach, are presented in terms of trailing edge induced displacement and morphed shape.

  15. Structural Optimization of Slender Robot Arm Based on Sensitivity Analysis

    Directory of Open Access Journals (Sweden)

    Zhong Luo

    2012-01-01

    Full Text Available An effective structural optimization method based on a sensitivity analysis is proposed to optimize the variable section of a slender robot arm. The structure mechanism and the operating principle of a polishing robot are introduced firstly, and its stiffness model is established. Then, a design of sensitivity analysis method and a sequential linear programming (SLP strategy are developed. At the beginning of the optimization, the design sensitivity analysis method is applied to select the sensitive design variables which can make the optimized results more efficient and accurate. In addition, it can also be used to determine the scale of moving step which will improve the convergency during the optimization process. The design sensitivities are calculated using the finite difference method. The search for the final optimal structure is performed using the SLP method. Simulation results show that the proposed structure optimization method is effective in enhancing the stiffness of the robot arm regardless of the robot arm suffering either a constant force or variable forces.

  16. Impedance based sensor technology to monitor stiffness of biological structures

    Science.gov (United States)

    Annamdas, Venu Gopal Madhav; Annamdas, Kiran Kishore Kumar

    2010-04-01

    In countries like USA or Japan it is not so uncommon to have wooden structures in their homes. However, metals and its alloys are the most widely used engineering materials in construction of any military or civil structure. Revisiting natural disasters like the recent Haiti earthquake (12 Jan 2010) or Katrina (cyclones) reminds the necessity to have better housing infrastructure with robust monitoring systems. Traditionally wood is accepted as excellent rehabilitation material, after any disaster. The recycling materials extracted from in-organic, biodegradable wastes, also can be used for rehabilitation. The key issue which dampens the life of these rehabilitated structure including green materials (like wood) is unnecessary deposits (nails, screws, bolts etc)/damages due to insect attack. Thus, a few health monitoring techniques have emerged in the recent past. Electromechanical Impedance technique is one such technique, which is simple but robust to detect variations in the integrity of structures. In this paper, impedance based piezoceramic sensor was bonded on wooden sample, which was used to study changes due to metallic (steel nails) deposits at various locations. A study of weight deposits on aluminum plate was used for comparisons.

  17. Rule-Based Classification of Chemical Structures by Scaffold.

    Science.gov (United States)

    Schuffenhauer, Ansgar; Varin, Thibault

    2011-08-01

    Databases for small organic chemical molecules usually contain millions of structures. The screening decks of pharmaceutical companies contain more than a million of structures. Nevertheless chemical substructure searching in these databases can be performed interactively in seconds. Because of this nobody has really missed structural classification of these databases for the purpose of finding data for individual chemical substructures. However, a full deck high-throughput screen produces also activity data for more than a million of substances. How can this amount of data be analyzed? Which are the active scaffolds identified by an assays? To answer such questions systematic classifications of molecules by scaffolds are needed. In this review it is described how molecules can be hierarchically classified by their scaffolds. It is explained how such classifications can be used to identify active scaffolds in an HTS data set. Once active classes are identified, they need to be visualized in the context of related scaffolds in order to understand SAR. Consequently such visualizations are another topic of this review. In addition scaffold based diversity measures are discussed and an outlook is given about the potential impact of structural classifications on a chemically aware semantic web.

  18. Stabilising emulsion-based colloidal structures with mixed food ingredients.

    Science.gov (United States)

    Dickinson, Eric

    2013-03-15

    The physical scientist views food as a complex form of soft matter. The complexity has its origin in the numerous ingredients that are typically mixed together and the subtle variations in microstructure and texture induced by thermal and mechanical processing. The colloid science approach to food product formulation is based on the assumption that the major product attributes such as appearance, rheology and physical stability are determined by the spatial distribution and interactions of a small number of generic structural entities (biopolymers, particles, droplets, bubbles, crystals) organised in various kinds of structural arrangements (layers, complexes, aggregates, networks). This review describes some recent advances in this field with reference to three discrete classes of dispersed systems: particle-stabilised emulsions, emulsion gels and aerated emulsions. Particular attention is directed towards explaining the crucial role of the macromolecular ingredients (proteins and polysaccharides) in controlling the formation and stabilisation of the colloidal structures. The ultimate objective of this research is to provide the basic physicochemical insight required for the reliable manufacture of novel structured foods with an appealing taste and texture, whilst incorporating a more healthy set of ingredients than those found in many existing traditional products.

  19. Position Mooring Control Based on a Structural Reliability Criterion

    DEFF Research Database (Denmark)

    Fang, Shaoji; Leira, Bernt J.; Blanke, Mogens

    2013-01-01

    is achieved using structural reliability indices in a cost function, where both the mean mooring-line tension and dynamic effects are considered. An optimal set-point is automatically produced without need for manual interaction. The parameters of the extreme value distribution are calculated on-line thereby...... adapting the set-point calculations to the prevailing environment. In contrast to earlier approaches, several mooring line are simultaneously accounted for by the algorithm, not only the most critical one. Detailed simulations illustrate the features of the new method and it is shown that the structural...... reliability criterion based algorithm ensures the safety of mooring lines in a variety of external environmental conditions and also in situations of failure of a single line....

  20. Structure damage detection based on random forest recursive feature elimination

    Science.gov (United States)

    Zhou, Qifeng; Zhou, Hao; Zhou, Qingqing; Yang, Fan; Luo, Linkai

    2014-05-01

    Feature extraction is a key former step in structural damage detection. In this paper, a structural damage detection method based on wavelet packet decomposition (WPD) and random forest recursive feature elimination (RF-RFE) is proposed. In order to gain the most effective feature subset and to improve the identification accuracy a two-stage feature selection method is adopted after WPD. First, the damage features are sorted according to original random forest variable importance analysis. Second, using RF-RFE to eliminate the least important feature and reorder the feature list each time, then get the new feature importance sequence. Finally, k-nearest neighbor (KNN) algorithm, as a benchmark classifier, is used to evaluate the extracted feature subset. A four-storey steel shear building model is chosen as an example in method verification. The experimental results show that using the fewer features got from proposed method can achieve higher identification accuracy and reduce the detection time cost.

  1. Design Method for EPS Control System Based on KANSEI Structure

    Science.gov (United States)

    Saitoh, Yumi; Itoh, Hideaki; Ozaki, Fuminori; Nakamura, Takenobu; Kawaji, Shigeyasu

    Recently, it has been identified that a KANSEI engineering plays an important role in functional design developing for realizing highly sophisticated products. However, in practical development methods, we design products and optimise the design trial and error, which indecates that we depend on the skill set of experts. In this paper, we focus on an automobile electric power steering (EPS) for which a functional design is required. First, the KANSEI structure is determined on the basis of the steering feeling of an experienced driver, and an EPS control design based on this KANSEI structure is proposed. Then, the EPS control parameters are adjusted in accordance with the KANSEI index. Finally, by assessing the experimental results obtained from the driver, the effectiveness of the proposed design method is verified.

  2. Refinement of circular-polarization based on multilayer film structure

    Institute of Scientific and Technical Information of China (English)

    LI Bin; LEE Kuei-jen; CHOU His-tseng; HUANG Shan-guo; GU Wan-yi

    2009-01-01

    Circular-polarization discrimination appears in many antennas' applications. A compensation approach based on multilayer film structure is proposed to improve the axial ratio of the magnitude of the two perpendicular modes of the lump ports. The goal is to widen the beamwidth of radiation that has an axial ratio less than 3 dB and thus reducing the complexity at the receiver. A transfer matrix method was developed to represent the multilayer film and characterize its performance. Simulation using high frequency structure simulator shows that a crossed dipole, as an example, can achieve a beamwidth of more than at the frequency of 12.45 GHz after compensation. Finally, conclusions and future work about this compensation method are presented.

  3. Community structure in traffic zones based on travel demand

    Science.gov (United States)

    Sun, Li; Ling, Ximan; He, Kun; Tan, Qian

    2016-09-01

    Large structure in complex networks can be studied by dividing it into communities or modules. Urban traffic system is one of the most critical infrastructures. It can be abstracted into a complex network composed of tightly connected groups. Here, we analyze community structure in urban traffic zones based on the community detection method in network science. Spectral algorithm using the eigenvectors of matrices is employed. Our empirical results indicate that the traffic communities are variant with the travel demand distribution, since in the morning the majority of the passengers are traveling from home to work and in the evening they are traveling a contrary direction. Meanwhile, the origin-destination pairs with large number of trips play a significant role in urban traffic network's community division. The layout of traffic community in a city also depends on the residents' trajectories.

  4. Structure-based control of complex networks with nonlinear dynamics

    CERN Document Server

    Zañudo, Jorge G T; Albert, Réka

    2016-01-01

    Given the network of interactions underlying a complex system, what can we learn about controlling such a system solely from its structure? Over a century of research in control theory has given us tools to answer this question, which were widely applied in science and engineering. Yet the current tools do not always consider the inherently nonlinear dynamics of real systems and the naturally occurring system states in their definition of "control", a term whose interpretation varies across disciplines. Here we use a new mathematical framework for structure-based control of networks governed by a broad class of nonlinear dynamics that includes the major dynamic models of biological, technological, and social processes. This framework provides realizable node overrides that steer a system towards any of its natural long term dynamic behaviors and which are guaranteed to be effective regardless of the dynamic details and parameters of the underlying system. We use this framework on several real networks, compar...

  5. Evidence-based ergonomics: a model and conceptual structure proposal.

    Science.gov (United States)

    Silveira, Dierci Marcio

    2012-01-01

    In Human Factors and Ergonomics Science (HFES), it is difficult to identify what is the best approach to tackle the workplace and systems design problems which needs to be solved, and it has been also advocated as transdisciplinary and multidisciplinary the issue of "How to solve the human factors and ergonomics problems that are identified?". The proposition on this study is to combine the theoretical approach for Sustainability Science, the Taxonomy of the Human Factors and Ergonomics (HFE) discipline and the framework for Evidence-Based Medicine in an attempt to be applied in Human Factors and Ergonomics. Applications of ontologies are known in the field of medical research and computer science. By scrutinizing the key requirements for the HFES structuring of knowledge, it was designed a reference model, First, it was identified the important requirements for HFES Concept structuring, as regarded by Meister. Second, it was developed an evidence-based ergonomics framework as a reference model composed of six levels based on these requirements. Third, it was devised a mapping tool using linguistic resources to translate human work, systems environment and the complexities inherent to their hierarchical relationships to support future development at Level 2 of the reference model and for meeting the two major challenges for HFES, namely, identifying what problems should be addressed in HFE as an Autonomous Science itself and proposing solutions by integrating concepts and methods applied in HFES for those problems.

  6. Increased complexity of gene structure and base composition in vertebrates

    Institute of Scientific and Technical Information of China (English)

    Ying Wu; Huizhong Yuan; Shengjun Tan; Jian-Qun Chen; Dacheng Tian; Haiwang Yang

    2011-01-01

    How the structure and base composition of genes changed with the evolution of vertebrates remains a puzzling question. Here we analyzed 895 orthologous protein-coding genes in six multicellular animals: human, chicken, zebrafish, sea squirt, fruit fly, and worm. Our analyses reveal that many gene regions, particularly intron and 3' UTR, gradually expanded throughout the evolution of vertebrates from their invertebrate ancestors, and that the number of exons per gene increased. Studies based on all protein-coding genes in each genome provide consistent results.We also find that GC-content increased in many gene regions (especially 5' UTR) in the evolution of endotherms, except in coding-exons.Analysis of individual genomes shows that 3′ UTR demonstrated stronger length and CC-content correlation with intron than 5' UTR, and gene with large intron in all six species demonstrated relatively similar GC-content. Our data indicates a great increase in complexity in vertebrate genes and we propose that the requirement for morphological and functional changes is probably the driving force behind the evolution of structure and base composition complexity in multicellular animal genes.

  7. Three decades of structure- and property-based molecular design.

    Science.gov (United States)

    Müller, Klaus

    2014-01-01

    Roche has pioneered structure- and property-based molecular design to drug discovery. While this is an ongoing development, the past three decades feature key events that have revolutionized the way drug discovery is conducted in Big Pharma industry. It has been a great privilege to have been involved in this transformation process, to have been able to collaborate with, direct, guide, or simply encourage outstanding experts in various disciplines to build and further develop what has become a major pillar of modern small-molecule drug discovery. This article is an account of major events that took place since the early decision of Roche to implement computer-assisted molecular modeling 32 years ago and is devoted to the key players involved. It highlights the internal build-up of structural biology, with protein X-ray structure determination at its core, and the early setup of bioinformatics. It describes the strategic shift to large compound libraries and high-throughput screening with the development of novel compound storage and ultra-high-throughput screening facilities, as well as the strategic return to focused screening of small motif-based compound libraries. These developments were accompanied by the rise of miniaturized parallel compound property analytics which resulted in a major paradigm shift in medicinal chemistry from linear to multi-dimensional lead optimization. The rapid growth of huge collections of property data stimulated the development of various novel data mining concepts with 'matched molecular pair' analysis and novel variants thereof playing crucial roles. As compound properties got more prominent in molecular design, exploration of specific structural motifs for property modulation became a research activity complementary to target-oriented medicinal chemistry. The exploration of oxetane is given as an example. For the sake of brevity, this account cannot detail all further developments that have taken place in each individual area of

  8. Structure-based, rational design of T cell receptors

    Directory of Open Access Journals (Sweden)

    Vincent eZoete

    2013-09-01

    Full Text Available Adoptive cell transfer using engineered T cells is emerging as a promising treatment for metastatic melanoma. Such an approach allows one to introduce TCR modifications that, while maintaining the specificity for the targeted antigen, can enhance the binding and kinetic parameters for the interaction pMHC. Using the well-characterized 2C TCR/SIYR/H-2K(b structure as a model system, we demonstrated that a binding free energy decomposition based on the MM-GBSA approach provides a detailed and reliable description of the TCR/pMHC interactions at the structural and thermodynamic levels. Starting from this result, we developed a new structure-based approach, to rationally design new TCR sequences, and applied it to the BC1 TCR targeting the HLA-A2 restricted NY-ESO-1157-165 cancer-testis epitope. 54% of the designed sequence replacements exhibited improved pMHC-binding as compared to the native TCR, with up to 150 fold increase in affinity, while preserving specificity. Genetically-engineered CD8+ T cells expressing these modified TCRs showed an improved functional activity compared to those expressing BC1 TCR. We measured maximum levels of activities for TCRs within the upper limit of natural affinity. Beyond the affinity threshold at KD < 1 μM we observed an attenuation in cellular function. We have also developed a homology modeling-based approach, TCRep 3D, to obtain accurate structural models of any TCR-pMHC complexes. We have complemented the approach with a simplified rigid method to predict the TCR orientation over pMHC. These methods potentially extend the use of our TCR engineering method to entire TCR repertoires for which no X-ray structure is available. We have also performed a steered molecular dynamics study of the unbinding of the TCR-pMHC complex to get a better understanding of how TCRs interact with pMHCs. This entire rational TCR design pipeline is now being used to produce rationally optimized TCRs for adoptive cell therapies of

  9. Structure-Specific Ribonucleases for MS-Based Elucidation of Higher-Order RNA Structure

    Science.gov (United States)

    Scalabrin, Matteo; Siu, Yik; Asare-Okai, Papa Nii; Fabris, Daniele

    2014-07-01

    Supported by high-throughput sequencing technologies, structure-specific nucleases are experiencing a renaissance as biochemical probes for genome-wide mapping of nucleic acid structure. This report explores the benefits and pitfalls of the application of Mung bean (Mb) and V1 nuclease, which attack specifically single- and double-stranded regions of nucleic acids, as possible structural probes to be employed in combination with MS detection. Both enzymes were found capable of operating in ammonium-based solutions that are preferred for high-resolution analysis by direct infusion electrospray ionization (ESI). Sequence analysis by tandem mass spectrometry (MS/MS) was performed to confirm mapping assignments and to resolve possible ambiguities arising from the concomitant formation of isobaric products with identical base composition and different sequences. The observed products grouped together into ladder-type series that facilitated their assignment to unique regions of the substrate, but revealed also a certain level of uncertainty in identifying the boundaries between paired and unpaired regions. Various experimental factors that are known to stabilize nucleic acid structure, such as higher ionic strength, presence of Mg(II), etc., increased the accuracy of cleavage information, but did not completely eliminate deviations from expected results. These observations suggest extreme caution in interpreting the results afforded by these types of reagents. Regardless of the analytical platform of choice, the results highlighted the need to repeat probing experiments under the most diverse possible conditions to recognize potential artifacts and to increase the level of confidence in the observed structural information.

  10. Reliability-Based Inspection Planning for Structural Systems

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard

    1993-01-01

    A general model for reliability-based optimal inspection and repair strategies for structural systems is described. The total expected costs in the design lifetime is minimized with the number of inspections, the inspection times and efforts as decision variables. The equivalence of this model...... with a preposterior analysis from statistical decision theory is discussed. It is described how information obtained by an inspection can be used in a repair decision. Stochastic models for inspection, measurement and repair actions are presented. The general model is applied for inspection and repair planning...

  11. Community Structure Detection Algorithm Based on the Node Belonging Degree

    Directory of Open Access Journals (Sweden)

    Jian Li

    2013-07-01

    Full Text Available In this paper, we propose a novel algorithm to identify communities in complex networks based on the node belonging degree. First, we give the concept of the node belonging degree, and then determine whether a node belongs to a community or not according to the belonging degree of the node with respect to the community. The experiment results of three real-world networks: a network with three communities with 19 nodes, Zachary Karate Club and network of American college football teams show that the proposed algorithm has satisfactory community structure detection.  

  12. Structure-based design of covalent Siah inhibitors.

    Science.gov (United States)

    Stebbins, John L; Santelli, Eugenio; Feng, Yongmei; De, Surya K; Purves, Angela; Motamedchaboki, Khatereh; Wu, Bainan; Ronai, Ze'ev A; Liddington, Robert C; Pellecchia, Maurizio

    2013-08-22

    The E3 ubiquitin ligase Siah regulates key cellular events that are central to cancer development and progression. A promising route to Siah inhibition is disrupting its interactions with adaptor proteins. However, typical of protein-protein interactions, traditional unbiased approaches to ligand discovery did not produce viable hits against this target, despite considerable effort and a multitude of approaches. Ultimately, a rational structure-based design strategy was successful for the identification of Siah inhibitors in which peptide binding drives specific covalent bond formation with the target. X-ray crystallography, mass spectrometry, and functional data demonstrate that these peptide mimetics are efficient covalent inhibitors of Siah and antagonize Siah-dependent regulation of Erk and Hif signaling in the cell. The proposed strategy may result useful as a general approach to the design of peptide-based inhibitors of other protein-protein interactions.

  13. Statistical detection of structural damage based on model reduction

    Institute of Scientific and Technical Information of China (English)

    Tao YIN; Heung-fai LAM; Hong-ping ZHU

    2009-01-01

    This paper proposes a statistical method for damage detection based on the finite element (FE) model reduction technique that utilizes measured modal data with a limited number of sensors.A deterministic damage detection process is formulated based on the model reduction technique.The probabilistic process is integrated into the deterministic damage detection process using a perturbation technique,resulting in a statistical structural damage detection method.This is achieved by deriving the firstand second-order partial derivatives of uncertain parameters,such as elasticity of the damaged member,with respect to the measurement noise,which allows expectation and covariance matrix of the uncertain parameters to be calculated.Besides the theoretical development,this paper reports numerical verification of the proposed method using a portal frame example and Monte Carlo simulation.

  14. Social Recommender Systems Based on Coupling Network Structure Analysis

    CERN Document Server

    Hu, Xiao; Chen, Xiaolong; Zhang, Zi-Ke

    2012-01-01

    The past few years has witnessed the great success of recommender systems, which can significantly help users find relevant and interesting items for them in the information era. However, a vast class of researches in this area mainly focus on predicting missing links in bipartite user-item networks (represented as behavioral networks). Comparatively, the social impact, especially the network structure based properties, is relatively lack of study. In this paper, we firstly obtain five corresponding network-based features, including user activity, average neighbors' degree, clustering coefficient, assortative coefficient and discrimination, from social and behavioral networks, respectively. A hybrid algorithm is proposed to integrate those features from two respective networks. Subsequently, we employ a machine learning process to use those features to provide recommendation results in a binary classifier method. Experimental results on a real dataset, Flixster, suggest that the proposed method can significan...

  15. Structure- and oil type-based efficacy of emulsion adjuvants.

    Science.gov (United States)

    Jansen, Theo; Hofmans, Marij P M; Theelen, Marc J G; Manders, Frans; Schijns, Virgil E J C

    2006-06-29

    Oil-based emulsions are well-known immunopotentiators for inactivated, "killed" vaccines. We addressed the relationship between emulsion structure and levels of in vivo antibody formation to inactivated New Castle Disease virus (NDV) and Infectious Bronchitis virus (IBV) as antigens in 3-week-old chickens. The use of a polymeric emulsifier allowed for direct comparison of three types of emulsions, water-in-oil (W/O), oil-in-water (O/W) and W/O-in-water (W/O/W), while maintaining an identical content of components for each vehicle. They were prepared with either non-metabolizable, mineral oil or metabolizable, Miglyol 840. In addition, we assessed the inherent release capacity of each emulsion variant in vitro. Remarkably, we noted that W/O-type emulsions induced the best immune responses, while they released no antigen during 3 weeks. In general, mineral oil vaccines showed superior efficacy compared to Miglyol 840-based vaccines.

  16. Improved Computational Model of Grid Cells Based on Column Structure

    Institute of Scientific and Technical Information of China (English)

    Yang Zhou; Dewei Wu; Weilong Li; Jia Du

    2016-01-01

    To simulate the firing pattern of biological grid cells, this paper presents an improved computational model of grid cells based on column structure. In this model, the displacement along different directions is processed by modulus operation, and the obtained remainder is associated with firing rate of grid cell. Compared with the original model, the improved parts include that: the base of modulus operation is changed, and the firing rate in firing field is encoded by Gaussian⁃like function. Simulation validates that the firing pattern generated by the improved computational model is more consistent with biological characteristic than original model. Besides, the firing pattern is badly influenced by the cumulative positioning error, but the computational model can also generate the regularly hexagonal firing pattern when the real⁃time positioning results are modified.

  17. Performance characterization of structured light-based fingerprint scanner

    Science.gov (United States)

    Hassebrook, Laurence G.; Wang, Minghao; Daley, Raymond C.

    2013-05-01

    Our group believes that the evolution of fingerprint capture technology is in transition to include 3-D non-contact fingerprint capture. More specifically we believe that systems based on structured light illumination provide the highest level of depth measurement accuracy. However, for these new technologies to be fully accepted by the biometric community, they must be compliant with federal standards of performance. At present these standards do not exist for this new biometric technology. We propose and define a set of test procedures to be used to verify compliance with the Federal Bureau of Investigation's image quality specification for Personal Identity Verification single fingerprint capture devices. The proposed test procedures include: geometric accuracy, lateral resolution based on intensity or depth, gray level uniformity and flattened fingerprint image quality. Several 2-D contact analogies, performance tradeoffs and optimization dilemmas are evaluated and proposed solutions are presented.

  18. Structured Light-Based Hazard Detection For Planetary Surface Navigation

    Science.gov (United States)

    Nefian, Ara; Wong, Uland Y.; Dille, Michael; Bouyssounouse, Xavier; Edwards, Laurence; To, Vinh; Deans, Matthew; Fong, Terry

    2017-01-01

    This paper describes a structured light-based sensor for hazard avoidance in planetary environments. The system presented here can also be used in terrestrial applications constrained by reduced onboard power and computational complexity and low illumination conditions. The sensor is on a calibrated camera and laser dot projector system. The onboard hazard avoidance system determines the position of the projected dots in the image and through a triangulation process detects potential hazards. The paper presents the design parameters for this sensor and describes the image based solution for hazard avoidance. The system presented here was tested extensively in day and night conditions in Lunar analogue environments. The current system achieves over 97 detection rate with 1.7 false alarms over 2000 images.

  19. Improved RB-HARQ scheme based on structured LDPC codes

    Institute of Scientific and Technical Information of China (English)

    WANG Wen-jun; LIN Yue-wei; YAN Yuan

    2007-01-01

    Reliability-based hybrid automatic repeat request (ARQ) (RB-HARQ) is a recently introduced approach to incremental-redundancy ARQ. In RB-HARQ scheme, the bits that are to be retransmitted are adaptively selected at the receiver based on the estimated bit reliability. It could result in significant performance gain but requires huge overhead in the feedback channel. In this study, an improved RB-HARQ scheme (IRB-HARQ) for structured low-density parity-check codes is proposed, which simplifies the comparison operations needed to search the bits to be retransmitted and outperforms the RB-HARQ scheme in consideration of the bit transmission power for the requesting messages on the feedback link. Simulation results show that the IRB-HARQ scheme is more efficient and practical than the RB-HARQ scheme.

  20. Structural eigenfrequency optimization based on local sub-domain "frequencies"

    DEFF Research Database (Denmark)

    Pedersen, Pauli; Pedersen, Niels Leergaard

    2013-01-01

    The engineering approach of fully stressed design is a practical tool with a theoretical foundation. The analog approach to structural eigenfrequency optimization is presented here with its theoretical foundation. A numerical redesign procedure is proposed and illustrated with examples.......For the ideal case, an optimality criterion is fulfilled if the design have the same sub-domain ”frequency” (local Rayleigh quotient). Sensitivity analysis shows an important relation between squared system eigenfrequency and squared local sub-domain frequency for a given eigenmode. Higher order...... eigenfrequencies may also be controlled in this manner.The presented examples are based on 2D finite element models with the use of subspace iteration for analysis and a recursive design procedure based on the derived optimality condition. The design that maximize a frequency depend on the total amount...

  1. Method of pectus excavatum measurement based on structured light technique

    Science.gov (United States)

    Glinkowski, Wojciech; Sitnik, Robert; Witkowski, Marcin; Kocoń, Hanna; Bolewicki, Pawel; Górecki, Andrzej

    2009-07-01

    We present an automatic method for assessment of pectus excavatum severity based on an optical 3-D markerless shape measurement. A four-directional measurement system based on a structured light projection method is built to capture the shape of the body surface of the patients. The system setup is described and typical measurement parameters are given. The automated data analysis path is explained. Their main steps are: normalization of trunk model orientation, cutting the model into slices, analysis of each slice shape, selecting the proper slice for the assessment of pectus excavatum of the patient, and calculating its shape parameter. We develop a new shape parameter (I3ds) that shows high correlation with the computed tomography (CT) Haller index widely used for assessment of pectus excavatum. Clinical results and the evaluation of developed indexes are presented.

  2. Method of pectus excavatum measurement based on structured light technique.

    Science.gov (United States)

    Glinkowski, Wojciech; Sitnik, Robert; Witkowski, Marcin; Kocoń, Hanna; Bolewicki, Pawel; Górecki, Andrzej

    2009-01-01

    We present an automatic method for assessment of pectus excavatum severity based on an optical 3-D markerless shape measurement. A four-directional measurement system based on a structured light projection method is built to capture the shape of the body surface of the patients. The system setup is described and typical measurement parameters are given. The automated data analysis path is explained. Their main steps are: normalization of trunk model orientation, cutting the model into slices, analysis of each slice shape, selecting the proper slice for the assessment of pectus excavatum of the patient, and calculating its shape parameter. We develop a new shape parameter (I(3ds)) that shows high correlation with the computed tomography (CT) Haller index widely used for assessment of pectus excavatum. Clinical results and the evaluation of developed indexes are presented.

  3. Three decades of structure- and property-based molecular design

    DEFF Research Database (Denmark)

    Müller, Klaus

    2014-01-01

    of bioinformatics. It describes the strategic shift to large compound libraries and high-throughput screening with the development of novel compound storage and ultra-high-throughput screening facilities, as well as the strategic return to focused screening of small motif-based compound libraries......Roche has pioneered structure- and property-based molecular design to drug discovery. While this is an ongoing development, the past three decades feature key events that have revolutionized the way drug discovery is conducted in Big Pharma industry. It has been a great privilege to have been...... involved in this transformation process, to have been able to collaborate with, direct, guide, or simply encourage outstanding experts in various disciplines to build and further develop what has become a major pillar of modern small-molecule drug discovery. This article is an account of major events...

  4. Polarized light source based on graphene-nanoribbon hybrid structure

    Science.gov (United States)

    Xu, Pengfei; Zhang, Han; Qian, Haoliang; Chen, Bigeng; Jiang, Xiaoshun; Wu, Yuanpeng; Liu, Xiaowei; Liu, Xu; Yang, Qing

    2017-07-01

    Nanoscale light source is the key element for on-chip integrated optical communication system. As an important property of light source, polarization can be exploited to improve the information capacity of optical communication and the sensitivity of optical sensing. We demonstrate a novel TE-polarized light source based on graphene-nanoribbon (G-NR) hybrid structure. Thanks to the polarizing dependent absorption along graphene layer, the random polarized emission of nanoribbon (NR) can be transferred into the same TE polarization. In addition, lasing action in G-NR hybrid structure is also investigated. We attribute the polarization control to the differential attenuation of electromagnetic modes in graphene. Our simulation revealed electromagnetic field distribution and far field polar images of TE and TM modes in nanoribbon, which is consistent with experimental results. The compact G-NR hybrid structure light source offers a new way to realize the polarization controllable nanoscale light source and facilitate the practical applications of nanowire or nanoribbon light source.

  5. Compressive-Sensing-Based Structure Identification for Multilayer Networks.

    Science.gov (United States)

    Mei, Guofeng; Wu, Xiaoqun; Wang, Yingfei; Hu, Mi; Lu, Jun-An; Chen, Guanrong

    2017-02-13

    The coexistence of multiple types of interactions within social, technological, and biological networks has motivated the study of the multilayer nature of real-world networks. Meanwhile, identifying network structures from dynamical observations is an essential issue pervading over the current research on complex networks. This paper addresses the problem of structure identification for multilayer networks, which is an important topic but involves a challenging inverse problem. To clearly reveal the formalism, the simplest two-layer network model is considered and a new approach to identifying the structure of one layer is proposed. Specifically, if the interested layer is sparsely connected and the node behaviors of the other layer are observable at a few time points, then a theoretical framework is established based on compressive sensing and regularization. Some numerical examples illustrate the effectiveness of the identification scheme, its requirement of a relatively small number of observations, as well as its robustness against small noise. It is noteworthy that the framework can be straightforwardly extended to multilayer networks, thus applicable to a variety of real-world complex systems.

  6. Assessment of Structural Damage Condition Based on Fuzzy Pattern Recognition

    Institute of Scientific and Technical Information of China (English)

    WU Zi-yan; ZHANG Yu

    2008-01-01

    This paper presents a new method of damage condition assessment that allows accommodating other types of uncertainties due to ambiguity, vagueness, and fuzziness that are statistically non-describable. In this method, healthy observations are used to construct a fuzzy set representing sound performance characteristics. Additionally, the bounds on the similarities among the structural damage states are prescribed by using the state similarity matrix. Thus, an optimal group fuzzy sets representing damage states such as little, moderate, and severe damage can be inferred as an inverse problem from healthy observations only. The optimal group of damage fuzzy sets is used to classify a set of observations at any unknown state of damage using the principles of fuzzy pattern recognition based on an approximate principle. This method can be embedded into the system of Structural Health Monitoring (SHM) to give advice about structural maintenance and life prediction. Finally, a case study, which comes from Reference [9] for damage pattern recognition is presented and discussed. The compared result illustrates our method is more effective and general, so it is very practical in engineering.

  7. Neuronal bases of structural coherence in contemporary dance observation.

    Science.gov (United States)

    Bachrach, Asaf; Jola, Corinne; Pallier, Christophe

    2016-01-01

    The neuronal processes underlying dance observation have been the focus of an increasing number of brain imaging studies over the past decade. However, the existing literature mainly dealt with effects of motor and visual expertise, whereas the neural and cognitive mechanisms that underlie the interpretation of dance choreographies remained unexplored. Hence, much attention has been given to the action observation network (AON) whereas the role of other potentially relevant neuro-cognitive mechanisms such as mentalizing (theory of mind) or language (narrative comprehension) in dance understanding is yet to be elucidated. We report the results of an fMRI study where the structural coherence of short contemporary dance choreographies was manipulated parametrically using the same taped movement material. Our participants were all trained dancers. The whole-brain analysis argues that the interpretation of structurally coherent dance phrases involves a subpart (superior parietal) of the AON as well as mentalizing regions in the dorsomedial prefrontal cortex. An ROI analysis based on a similar study using linguistic materials (Pallier et al., 2011) suggests that structural processing in language and dance might share certain neural mechanisms.

  8. OPTIMUM DESIGN BASED ON RELIABILITY IN STOCHASTIC STRUCTURE SYSTEMS

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The optimum design method based on the reliability is presented to the stochastic structure systems (i. e., the sectional area, length, elastic module and strength of the structural member are random variables) under the random loads. The sensitivity expression of system reliability index and the safety margins were presented in the stochastic structure systems. The optimum vector method was given. First, the expressions of the reliability index of the safety margins with the improved first-order second-moment and the stochastic finite element method were deduced, and then the expressions of the systemic failure probability by probabilistic network evaluation technique(PNET) method were obtained. After derivation calculus, the expressions of the sensitivity analysis for the system reliability were obtained. Moreover, the optimum design with the optimum vector algorithm was undertaken. In the optimum iterative procedure, the gradient step and the optimum vector step were adopted to calculate. At the last, a numerical example was provided to illustrate that the method is efficient in the calculation, stably converges and fits the application in engineering.

  9. Scalable, ultra-resistant structural colors based on network metamaterials

    KAUST Repository

    Galinski, Henning

    2017-05-05

    Structural colors have drawn wide attention for their potential as a future printing technology for various applications, ranging from biomimetic tissues to adaptive camouflage materials. However, an efficient approach to realize robust colors with a scalable fabrication technique is still lacking, hampering the realization of practical applications with this platform. Here, we develop a new approach based on large-scale network metamaterials that combine dealloyed subwavelength structures at the nanoscale with lossless, ultra-thin dielectric coatings. By using theory and experiments, we show how subwavelength dielectric coatings control a mechanism of resonant light coupling with epsilon-near-zero regions generated in the metallic network, generating the formation of saturated structural colors that cover a wide portion of the spectrum. Ellipsometry measurements support the efficient observation of these colors, even at angles of 70°. The network-like architecture of these nanomaterials allows for high mechanical resistance, which is quantified in a series of nano-scratch tests. With such remarkable properties, these metastructures represent a robust design technology for real-world, large-scale commercial applications.

  10. Structure and Dynamics of Water at Carbon-Based Interfaces

    Directory of Open Access Journals (Sweden)

    Jordi Martí

    2017-03-01

    Full Text Available Water structure and dynamics are affected by the presence of a nearby interface. Here, first we review recent results by molecular dynamics simulations about the effect of different carbon-based materials, including armchair carbon nanotubes and a variety of graphene sheets—flat and with corrugation—on water structure and dynamics. We discuss the calculations of binding energies, hydrogen bond distributions, water’s diffusion coefficients and their relation with surface’s geometries at different thermodynamical conditions. Next, we present new results of the crystallization and dynamics of water in a rigid graphene sieve. In particular, we show that the diffusion of water confined between parallel walls depends on the plate distance in a non-monotonic way and is related to the water structuring, crystallization, re-melting and evaporation for decreasing inter-plate distance. Our results could be relevant in those applications where water is in contact with nanostructured carbon materials at ambient or cryogenic temperatures, as in man-made superhydrophobic materials or filtration membranes, or in techniques that take advantage of hydrated graphene interfaces, as in aqueous electron cryomicroscopy for the analysis of proteins adsorbed on graphene.

  11. Identification of Novel Smoothened Ligands Using Structure-Based Docking

    Science.gov (United States)

    Torosyan, Hayarpi; Parathaman, Pranavan; Irwin, John J.; Shoichet, Brian K.

    2016-01-01

    The seven transmembrane protein Smoothened is required for Hedgehog signaling during embryonic development and adult tissue homeostasis. Inappropriate activation of the Hedgehog signalling pathway leads to cancers such as basal cell carcinoma and medulloblastoma, and Smoothened inhibitors are now available clinically to treat these diseases. However, resistance to these inhibitors rapidly develops thereby limiting their efficacy. The determination of Smoothened crystal structures enables structure-based discovery of new ligands with new chemotypes that will be critical to combat resistance. In this study, we docked 3.2 million available, lead-like molecules against Smoothened, looking for those with high physical complementarity to its structure; this represents the first such campaign against the class Frizzled G-protein coupled receptor family. Twenty-one high-ranking compounds were selected for experimental testing, and four, representing three different chemotypes, were identified to antagonize Smoothened with IC50 values better than 50 μM. A screen for analogs revealed another six molecules, with IC50 values in the low micromolar range. Importantly, one of the most active of the new antagonists continued to be efficacious at the D473H mutant of Smoothened, which confers clinical resistance to the antagonist vismodegib in cancer treatment. PMID:27490099

  12. A structure-based model of semantic integrity constraints for relational data bases

    Science.gov (United States)

    Rasdorf, William J.; Ulberg, Karen J.; Baugh, John W., Jr.

    1987-01-01

    Data base management systems (DBMSs) are in widespread use because of the ease and flexibility with which users access large volumes of data. Ensuring data accuracy through integrity constraints is a central aspect of DBMS use. However, many DBMSs still lack adequate integrity support. In additon, a comprehensive theoretical basis for such support the role of a constraint classification system - has yet to be developed. This paper presents a formalism that classifies semantic integrity constraints based on the structure of the relational model. Integrity constraints are characterized by the portion of the data base structure they access, whether one or more relations, attributes, or tuples. Thus, the model is completely general, allowing the arbitrary specification of any constraint. Examples of each type of constraint are illustrated using a small engineering data base, and various implementation issues are discussed.

  13. Boron-Based Layered Structures for Energy Storage

    Energy Technology Data Exchange (ETDEWEB)

    Zhao, Y.; Wei, S. H.

    2012-01-01

    Based on Density Functional Theory simulations, we have studied the boron-based graphite-like materials, i.e., LiBC and MgB2 for energy storage. First, when half of the Li-ions in the LiBC are removed, the BC layered structure is still preserved. The Li intercalation potential (equilibrium lithium-insertion voltage of 2.3-2.4 V relative to lithium metal) is significantly higher than that in graphite, allowing Li0.5BC to function as a cathode material. The reversible electrochemical reaction, LiBC = Li0.5BC + 0.5Li, enables a specific energy density of 1088 Wh/kg and a volumetric energy density of 2463 Wh/L. Second, 75% of the Mg ions in MgB2 can be removed and reversibly inserted with the layered boron structures being preserved through an in-plane topological transformation between the hexagonal lattice domains and triangular domains. The mechanism of such a charge-driven transformation originates from the versatile valence state of boron in its planar form.

  14. Protein Function Prediction Based on Sequence and Structure Information

    KAUST Repository

    Smaili, Fatima Z.

    2016-05-25

    The number of available protein sequences in public databases is increasing exponentially. However, a significant fraction of these sequences lack functional annotation which is essential to our understanding of how biological systems and processes operate. In this master thesis project, we worked on inferring protein functions based on the primary protein sequence. In the approach we follow, 3D models are first constructed using I-TASSER. Functions are then deduced by structurally matching these predicted models, using global and local similarities, through three independent enzyme commission (EC) and gene ontology (GO) function libraries. The method was tested on 250 “hard” proteins, which lack homologous templates in both structure and function libraries. The results show that this method outperforms the conventional prediction methods based on sequence similarity or threading. Additionally, our method could be improved even further by incorporating protein-protein interaction information. Overall, the method we use provides an efficient approach for automated functional annotation of non-homologous proteins, starting from their sequence.

  15. Rule-based image interpretation with models of expected structure

    Science.gov (United States)

    Shemlon, Stephen; Dunn, Stanley M.

    1990-07-01

    Consider the problem of localizing and identifying cell organelle in a transmission electron micrograph. Opera. . tions on regions constitute the key tasks in segmenting such images. The construction of meaningful entities from an initial fine partitioning of such an image poses problems that are generally linked to the type of objects to be identified. Restraining region manipulation algorithms to a particular class of images may simplify the process. However the loss of retargetability for the segmentation process is a serious handicap of such a solution. Segmentation must be based on a formal mechanism for reasoning about scenes (cells) their images (trans. . mission electron micrographs) objects in the scene (organelle) and their representation (image regions) if the system is to be suitable for a wide variety of domains. Mathematical morphology offers such a mechanism but the drawbacks of point set topology limit its success to low-level vision tasks. A modification based on expected morphological properties of point sets and not their fixed structure is useful for intermediate vision. This modification makes it possible to develop a theory for region manipulation. The main goal of growing and shrinking is to obtain regions with a given expected structure. The operations involve a search in the region space for candidates satisfying specified conditions and capable of producing final regions that fit the desired goal subject to given constraints. In this paper we describe

  16. (Biodegradable Ionomeric Polyurethanes Based on Xanthan: Synthesis, Properties, and Structure

    Directory of Open Access Journals (Sweden)

    T. V. Travinskaya

    2017-01-01

    Full Text Available New (biodegradable environmentally friendly film-forming ionomeric polyurethanes (IPU based on renewable biotechnological polysaccharide xanthan (Xa have been obtained. The influence of the component composition on the colloidal-chemical and physic-mechanical properties of IPU/Xa and based films, as well as the change of their properties under the influence of environmental factors, have been studied. The results of IR-, PMS-, DMA-, and X-ray scattering study indicate that incorporation of Xa into the polyurethane chain initiates the formation of a new polymer structure different from the structure of the pure IPU (matrix: an amorphous polymer-polymer microdomain has occurred as a result of the chemical interaction of Xa and IPU. It predetermines the degradation of the IPU/Xa films as a whole, unlike the mixed polymer systems, and plays a key role in the improvement of material performance. The results of acid, alkaline hydrolysis, and incubation into the soil indicate the increase of the intensity of degradation processes occurring in the IPU/Xa in comparison with the pure IPU. It has been shown that the introduction of Xa not only imparts the biodegradability property to polyurethane, but also improves the mechanical properties.

  17. Optimization Design System for Composite Structures Based on Grid Technology

    Institute of Scientific and Technical Information of China (English)

    CHENG Wen-yuan; CHANG Yan; CUI De-gang; XIE Xiang-hui

    2007-01-01

    To solve the topology optimization of complicated multi-objective continuous/discrete design variables in aircraft structure design, a Parallel Pareto Genetic Algorithm (PPGA) is presented based on grid platform in this paper. In the algorithm, the commercial finite element analysis (FEA) software is integrated as the calculating tool for analyzing the objective functions and the filter of Pareto solution set based on weight information is introduced to deal with the relationships among all objectives. Grid technology is utilized in PPGA to realize the distributed computations and the user interface is developed to realize the job submission and job management locally/remotely. Taking the aero-elastic tailoring of a composite wing for optimization as an example, a set of Pareto solutions are obtained for the decision-maker. The numerical results show that the aileron reversal problem can be solved by adding the limited skin weight in this system. The algorithm can be used to solve complicated topology optimization for composite structures in engineering and the computation efficiency can be improved greatly by using the grid platform that aggregates numerous idle resources.

  18. Spectral methods and cluster structure in correlation-based networks

    Science.gov (United States)

    Heimo, Tapio; Tibély, Gergely; Saramäki, Jari; Kaski, Kimmo; Kertész, János

    2008-10-01

    We investigate how in complex systems the eigenpairs of the matrices derived from the correlations of multichannel observations reflect the cluster structure of the underlying networks. For this we use daily return data from the NYSE and focus specifically on the spectral properties of weight W=|-δ and diffusion matrices D=W/sj-δ, where C is the correlation matrix and si=∑jW the strength of node j. The eigenvalues (and corresponding eigenvectors) of the weight matrix are ranked in descending order. As in the earlier observations, the first eigenvector stands for a measure of the market correlations. Its components are, to first approximation, equal to the strengths of the nodes and there is a second order, roughly linear, correction. The high ranking eigenvectors, excluding the highest ranking one, are usually assigned to market sectors and industrial branches. Our study shows that both for weight and diffusion matrices the eigenpair analysis is not capable of easily deducing the cluster structure of the network without a priori knowledge. In addition we have studied the clustering of stocks using the asset graph approach with and without spectrum based noise filtering. It turns out that asset graphs are quite insensitive to noise and there is no sharp percolation transition as a function of the ratio of bonds included, thus no natural threshold value for that ratio seems to exist. We suggest that these observations can be of use for other correlation based networks as well.

  19. Structure-based Drug Screening and Ligand-Based Drug Screening Toward Protein-Compound Network

    Science.gov (United States)

    Fukunishi, Yoshifumi

    2007-12-01

    We developed two new methods to improve the accuracy of molecular interaction data using a protein-compound affinity matrix calculated by a protein-compound docking software. One method is a structure-based in silico drug screening method and another method is a ligand-based in silico drug screening method. These methods were applied to enhance the database enrichment of in silico drug screening and in silico target protein screening.

  20. Decomposition Criterion-based Redundancy Removal in Mechanical Structures

    Directory of Open Access Journals (Sweden)

    A. N. Bozhko

    2014-01-01

    Full Text Available The most important design solutions of production engineering for the assembly operation are an assembly sequence and assembly chart. Both are closely linked with each other and therefore are recorded in the single process flow sheet that is an assembly chart.Capability for successive order assembling and splitting into assembly units depends on a set of the product design properties from which the main ones are position mechanical connections used to locate details within a product. An adequate mathematical model of the mechanical connections of technical system is a hyper graph. It allows us to give the correct description of the location relation of variable-locality.The analysis of the array of drawings shows that many designs contain redundant mechanical connections. The inequality is a criterion of redundancy, where |X| is the number of tops of the hyper graph (details, and |R| is the number of hyper edges (full assembly bases. Excess of mutual coordination is a harmful phenomenon which at designing stage exhibits as unsolvable dimension chains, while at the assembly stage it shows as relocation. Redundant connections should be removed from a design at the earliest design-for-manufacturing stages. Removal of connections generates mechanical structures with different assembly properties. The work offers some important criteria of generation of irredundant mechanical structures. The paper considers in detail a maximum decomposition criterion, which allows us to receive structures with the greatest capability to split into assembly units. It shows that such structures exhibit high flexibility in assembling and are adaptable to various specifications and production processes.

  1. Individual balanced scorecard based on innovative models of personality structure

    Directory of Open Access Journals (Sweden)

    A.A. Polozov

    2013-06-01

    Full Text Available Article focuses on integration of different views on personality structure, which comprises the type of person, the type of character and several types of intelligence. The paper shows practical application of the concept. Graduates who seek to realize their career must comply with the activities of his personality type, the type of character and the dominant type of intelligence.The aim of the article. The aim of the article is to offer the variant of integrating various psychological doctrines. This variant must have higher convergence of expected and actual behavior of selected groups than any of the local concepts. Personal balanced scorecard based on the innovative model of personality structure is building in the article.Practical work was carried out by the authors on the two groups of students. The main condition for the practical work was the fact that students do not impose something.The results of the analysis. We defined that personality structure is a complex concept. It is important to combine different views on the structure of individual and to include various aspects. From the analysis of other authors works we found out that BSC idea is to balance system performance in four groups. The first group includes traditional financial performance. The second group describes external environment of the company and its relationship with customers. The third group describes internal processes of the enterprise. The fourth group allows us to describe the company's ability to learn and grow.Conclusions and directions of further researches. The focus of interest is mainly determined by the type of personality. However, the selection should be such that:consistent hierarchy of motives at this age;trends of economy in general and in the chosen industry in particular;supported by appropriate kind of intelligence;absorbed all of the recommended activity profiles as private.

  2. On the failure analysis of bondlines: Stress or energy based fracture criteria?

    DEFF Research Database (Denmark)

    Anyfantis, Konstantinos

    2014-01-01

    that characterizes a given bondline, both its cohesive strength and fracture toughness material parameters must be experimentally defined. Based on these properties, failure analysis of the bondline can be done either through stress- or energy-based criteria. The aim of this work is to investigate the effectiveness...... of each criteria type to effectively predict debonding initiation/propagation of different bondlines (brittle, quasi-brittle, ductile), which are eventually utilized for the evaluation of the joint's failure load. By representing a bondline according to its cohesive length scale, an effort is made...... experimentation programme. Fracture initiation and propagation of the bondlines was numerically simulated by cohesive zone models. (C) 2014 Elsevier Ltd. All rights reserved....

  3. Efficient tracker based on sparse coding with Euclidean local structure-based constraint

    Institute of Scientific and Technical Information of China (English)

    WANG Hongyuan; ZHANG Ji; CHEN Fuhua

    2016-01-01

    Sparse coding ( SC) based visual tracking ( l1⁃tracker) is gaining increasing attention, and many related algorithms are developed. In these algorithms, each candidate region is sparsely represented as a set of target tem⁃plates. However, the structure connecting these candidate regions is usually ignored. Lu proposed an NLSSC⁃tracker with non⁃local self⁃similarity sparse coding to address this issue, which has a high computational cost. In this study, we propose an Euclidean local⁃structure constraint based sparse coding tracker with a smoothed Euclidean local structure. With this tracker, the optimization procedure is transformed to a small⁃scale l1⁃optimization problem, sig⁃nificantly reducing the computational cost. Extensive experimental results on visual tracking demonstrate the effectiveness and efficiency of the proposed algorithm.

  4. Metal-oxide based nanoobjects: reactivity, building blocks for polymeric structures and structural variety

    Science.gov (United States)

    Müller, Achim; Roy, Soumyajit

    2002-12-01

    From the unique 'library' of molybdenum-oxide based building blocks/fragments under reducing conditions in aqueous solution a huge variety of nanoobjects, allowing specific reactions at well-defined positions, can be generated. This enables us to perform a new type of nanochemistry. Examples include the well-known molecular big-wheel of the type {Mo176} and big-ball of the type {Mo132} including their derivatives which are considered here. In addition, the by far largest structurally well-characterised cluster having 368 molybdenum atoms with the shape of a lemon is outlined and discussed. The bibliography includes 71 references.

  5. Structure Based Predictive Model for Coal Char Combustion

    Energy Technology Data Exchange (ETDEWEB)

    Robert Hurt; Joseph Calo; Robert Essenhigh; Christopher Hadad

    2000-12-30

    This unique collaborative project has taken a very fundamental look at the origin of structure, and combustion reactivity of coal chars. It was a combined experimental and theoretical effort involving three universities and collaborators from universities outside the U.S. and from U.S. National Laboratories and contract research companies. The project goal was to improve our understanding of char structure and behavior by examining the fundamental chemistry of its polyaromatic building blocks. The project team investigated the elementary oxidative attack on polyaromatic systems, and coupled with a study of the assembly processes that convert these polyaromatic clusters to mature carbon materials (or chars). We believe that the work done in this project has defined a powerful new science-based approach to the understanding of char behavior. The work on aromatic oxidation pathways made extensive use of computational chemistry, and was led by Professor Christopher Hadad in the Department of Chemistry at Ohio State University. Laboratory experiments on char structure, properties, and combustion reactivity were carried out at both OSU and Brown, led by Principle Investigators Joseph Calo, Robert Essenhigh, and Robert Hurt. Modeling activities were divided into two parts: first unique models of crystal structure development were formulated by the team at Brown (PI'S Hurt and Calo) with input from Boston University and significant collaboration with Dr. Alan Kerstein at Sandia and with Dr. Zhong-Ying chen at SAIC. Secondly, new combustion models were developed and tested, led by Professor Essenhigh at OSU, Dieter Foertsch (a collaborator at the University of Stuttgart), and Professor Hurt at Brown. One product of this work is the CBK8 model of carbon burnout, which has already found practical use in CFD codes and in other numerical models of pulverized fuel combustion processes, such as EPRI's NOxLOI Predictor. The remainder of the report consists of detailed

  6. Research of Collaborative Filtering Recommendation Algorithm based on Network Structure

    Directory of Open Access Journals (Sweden)

    Hui PENG

    2013-10-01

    Full Text Available This paper combines the classic collaborative filtering algorithm with personalized recommendation algorithm based on network structure. For the data sparsity and malicious behavior problems of traditional collaborative filtering algorithm, the paper introduces a new kind of social network-based collaborative filtering algorithm. In order to improve the accuracy of the personalized recommendation technology, we first define empty state in the state space of multi-dimensional semi-Markov processes and obtain extended multi-dimensional semi-Markov processes which are combined with social network analysis theory, and then we get social network information flow model. The model describes the flow of information between the members of the social network. So, we propose collaborative filtering algorithm based on social network information flow model. The algorithm uses social network information and combines user trust with user interest and find nearest neighbors of the target user and then forms a project recommended to improve the accuracy of recommended. Compared with the traditional collaborative filtering algorithm, the algorithm can effectively alleviate the sparsity and malicious behavior problem, and significantly improve the quality of the recommendation system recommended.

  7. Reagentless, Structure-Switching, Electrochemical Aptamer-Based Sensors

    Science.gov (United States)

    Schoukroun-Barnes, Lauren R.; Macazo, Florika C.; Gutierrez, Brenda; Lottermoser, Justine; Liu, Juan; White, Ryan J.

    2016-06-01

    The development of structure-switching, electrochemical, aptamer-based sensors over the past ˜10 years has led to a variety of reagentless sensors capable of analytical detection in a range of sample matrices. The crux of this methodology is the coupling of target-induced conformation changes of a redox-labeled aptamer with electrochemical detection of the resulting altered charge transfer rate between the redox molecule and electrode surface. Using aptamer recognition expands the highly sensitive detection ability of electrochemistry to a range of previously inaccessible analytes. In this review, we focus on the methods of sensor fabrication and how sensor signaling is affected by fabrication parameters. We then discuss recent studies addressing the fundamentals of sensor signaling as well as quantitative characterization of the analytical performance of electrochemical aptamer-based sensors. Although the limits of detection of reported electrochemical aptamer-based sensors do not often reach that of gold-standard methods such as enzyme-linked immunosorbent assays, the operational convenience of the sensor platform enables exciting analytical applications that we address. Using illustrative examples, we highlight recent advances in the field that impact important areas of analytical chemistry. Finally, we discuss the challenges and prospects for this class of sensors.

  8. Reagentless, Structure-Switching, Electrochemical Aptamer-Based Sensors.

    Science.gov (United States)

    Schoukroun-Barnes, Lauren R; Macazo, Florika C; Gutierrez, Brenda; Lottermoser, Justine; Liu, Juan; White, Ryan J

    2016-06-12

    The development of structure-switching, electrochemical, aptamer-based sensors over the past ∼10 years has led to a variety of reagentless sensors capable of analytical detection in a range of sample matrices. The crux of this methodology is the coupling of target-induced conformation changes of a redox-labeled aptamer with electrochemical detection of the resulting altered charge transfer rate between the redox molecule and electrode surface. Using aptamer recognition expands the highly sensitive detection ability of electrochemistry to a range of previously inaccessible analytes. In this review, we focus on the methods of sensor fabrication and how sensor signaling is affected by fabrication parameters. We then discuss recent studies addressing the fundamentals of sensor signaling as well as quantitative characterization of the analytical performance of electrochemical aptamer-based sensors. Although the limits of detection of reported electrochemical aptamer-based sensors do not often reach that of gold-standard methods such as enzyme-linked immunosorbent assays, the operational convenience of the sensor platform enables exciting analytical applications that we address. Using illustrative examples, we highlight recent advances in the field that impact important areas of analytical chemistry. Finally, we discuss the challenges and prospects for this class of sensors.

  9. Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis

    Energy Technology Data Exchange (ETDEWEB)

    Pletneva, Nadya V.; Pletnev, Vladimir Z., E-mail: vzpletnev@gmail.com; Souslova, Ekaterina; Chudakov, Dmitry M. [Russian Academy of Sciences, Moscow (Russian Federation); Lukyanov, Sergey [Russian Academy of Sciences, Moscow (Russian Federation); Nizhny Novgorod State Medical Academy, Nizhny Novgorod (Russian Federation); Martynov, Vladimir I.; Arhipova, Svetlena; Artemyev, Igor [Russian Academy of Sciences, Moscow (Russian Federation); Wlodawer, Alexander [National Cancer Institute, Frederick, MD 21702 (United States); Dauter, Zbigniew [National Cancer Institute, Argonne, IL 60439 (United States); Pletnev, Sergei [National Cancer Institute, Argonne, IL 60439 (United States); SAIC-Frederick, 9700 South Cass Avenue, Argonne, IL 60439 (United States); Russian Academy of Sciences, Moscow (Russian Federation)

    2013-06-01

    The yellow fluorescent protein phiYFPv with improved folding has been developed from the spectrally identical wild-type phiYFP found in the marine jellyfish Phialidium. The yellow fluorescent protein phiYFPv (λ{sub em}{sup max} ≃ 537 nm) with improved folding has been developed from the spectrally identical wild-type phiYFP found in the marine jellyfish Phialidium. The latter fluorescent protein is one of only two known cases of naturally occurring proteins that exhibit emission spectra in the yellow–orange range (535–555 nm). Here, the crystal structure of phiYFPv has been determined at 2.05 Å resolution. The ‘yellow’ chromophore formed from the sequence triad Thr65-Tyr66-Gly67 adopts the bicyclic structure typical of fluorophores emitting in the green spectral range. It was demonstrated that perfect antiparallel π-stacking of chromophore Tyr66 and the proximal Tyr203, as well as Val205, facing the chromophore phenolic ring are chiefly responsible for the observed yellow emission of phiYFPv at 537 nm. Structure-based site-directed mutagenesis has been used to identify the key functional residues in the chromophore environment. The obtained results have been utilized to improve the properties of phiYFPv and its homologous monomeric biomarker tagYFP.

  10. Integrating structure-based and ligand-based approaches for computational drug design.

    Science.gov (United States)

    Wilson, Gregory L; Lill, Markus A

    2011-04-01

    Methods utilized in computer-aided drug design can be classified into two major categories: structure based and ligand based, using information on the structure of the protein or on the biological and physicochemical properties of bound ligands, respectively. In recent years there has been a trend towards integrating these two methods in order to enhance the reliability and efficiency of computer-aided drug-design approaches by combining information from both the ligand and the protein. This trend resulted in a variety of methods that include: pseudoreceptor methods, pharmacophore methods, fingerprint methods and approaches integrating docking with similarity-based methods. In this article, we will describe the concepts behind each method and selected applications.

  11. Solution structures of nanoassemblies based on pyrogallol[4]arenes.

    Science.gov (United States)

    Kumari, Harshita; Deakyne, Carol A; Atwood, Jerry L

    2014-10-21

    Nanoassemblies of hydrogen-bonded and metal-seamed pyrogallol[4]arenes have been shown to possess novel solution-phase geometries. Further, we have demonstrated that both guest encapsulation and structural rearrangements may be studied by solution-phase techniques such as small-angle neutron scattering (SANS) and diffusion NMR. Application of these techniques to pyrogallol[4]arene-based nanoassemblies has allowed (1) differentiation among spherical, ellipsoidal, toroidal, and tubular structures in solution, (2) determination of factors that control the preferred geometrical shape and size of the nanoassemblies, and (3) detection of small variations in metric dimensions distinguishing similarly and differently shaped nanoassemblies in a given solution. Indeed, we have shown that the solution-phase structure of such nanoassemblies is often quite different from what one would predict based on solid-state studies, a result in disagreement with the frequently made assumption that these assemblies have similar structures in the two phases. We instead have predicted solid-state architectures from solution-phase structures by combining the solution-phase analysis with solid-state magnetic and elemental analyses. Specifically, the iron-seamed C-methylpyrogallol[4]arene nanoassembly was found to be tubular in solution and predicted to be tubular in the solid state, but it was found to undergo a rearrangement from a tubular to spherical geometry in solution as a function of base concentration. The absence of metal within a tubular framework affects its stability in both solution and the solid state; however, this instability is not necessarily characteristic of hydrogen-bonded capsular entities. Even metal seaming of the capsules does not guarantee similar solid-state and solution-phase architectures. The rugby ball-shaped gallium-seamed C-butylpyrogallol[4]arene hexamer becomes toroidal on dissolution, as does the spherically shaped gallium/zinc-seamed C-butylpyrogallol[4

  12. Shape Memory Alloy-Based Periodic Cellular Structures Project

    Data.gov (United States)

    National Aeronautics and Space Administration — This SBIR Phase I effort will develop and demonstrate an innovative shape memory alloy (SMA) periodic cellular structural technology. Periodic cellular structures...

  13. Structured Development Environment Based on the Object—Oriented Comcepts

    Institute of Scientific and Technical Information of China (English)

    费翔林; 廖雷; 等

    1992-01-01

    The object-oriented software development is a kind of promising software methodology and leading to a wholly new way for solving problems.In the research on the rapid construction of Structured Development Environment(SDE)that supports detailed design and coding in software development,a generator that can generate the SE has been applied as a metatool.The kernel of SDE is a syntax-directed editor based on the object-oriented concepts.The key issue in the design of SDE is how to represent the elements of target language with the class concept and a program internally.In this paper,the key concepts and design of the SDE and its generator as well as the implementation of a prototype are to be discussed.

  14. Structural Design of Pavement Overlays Based on Functional Parameters

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    This paper reports a practical pavement overlay design methodbased on PCI (Pavement Condition Index). Current pavement investigation method (JTJ 073-96) is compared to the ASTM D 5340, which is the standard test method for airport pavement condition evaluation initially developed for US Air Force. The deficiency in the calculation of PCI based on field data in JTJ 073 is discussed. The proposed design method is compared to AASHTO overlay design method with good agreement. The paper concludes with an example illustrating how the existing pavement structural capacity is related to pavement distress survey results. The presented design method can be used in the design for overlay rehabilitation of pavements of highways, urban streets and airports.

  15. VIBRATION ANALYSIS OF TURBINE BASED ON FLUID-STRUCTURE COUPLING

    Institute of Scientific and Technical Information of China (English)

    LIU Demin; LIU Xiaobing

    2008-01-01

    The vibration of a Francis turbine is analyzed with the additional quality matrix method based on fluid-structure coupling (FSC). Firstly, the vibration frequency and mode of blade and runner in air and water are calculated. Secondly, the influences to runner frequency domain by large flow, small flow and design flow working conditions are compared. Finally the influences to runner modes by centrifugal forces under three rotating speeds of 400 r/min, 500 r/min and 600 r/min are compared. The centrifugal force and small flow working condition have greatly influence on the vibration of small runner. With the increase of centrifugal force, the vibration frequency of the runner is sharply increased. Some order frequencies are even close to the runner natural frequency in the air. Because the low frequency vibration will severely damage the stability of the turbine, low frequency vibration of units should be avoided as soon as possible.

  16. Structure-based drug design identifies novel LPA3 antagonists.

    Science.gov (United States)

    Fells, James I; Tsukahara, Ryoko; Liu, Jianxiong; Tigyi, Gabor; Parrill, Abby L

    2009-11-01

    Compound 5 ([5-(3-nitrophenoxy)-1,3-dioxo-1,3-dihydro-2-isoindol-2-yl]acetic acid) was identified as a weak selective LPA(3) antagonist (IC(50)=4504 nM) in a virtual screening effort to optimize a dual LPA(2 and 3) antagonist. Structure-based drug design techniques were used to prioritize similarity search matches of compound 5. This strategy rapidly identified 10 novel antagonists. The two most efficacious compounds identified inhibit activation of the LPA(3) receptor by 200 nM LPA with IC(50) values of 752 nM and 2992 nM. These compounds additionally define changes to our previously reported pharmacophore that will improve its ability to identify more potent and selective LPA(3) receptor antagonists. The results of the combined computational and experimental screening are reported.

  17. Four-terminal impedance of a graphene nanoribbon based structure

    Science.gov (United States)

    Shi, Yi-Jian; Lan, Jin; Ye, En-Jia; Sui, Wen-Quan; Zhao, Xuean

    2014-10-01

    The four-terminal impedance is studied in a typical graphene nanoribbon based structure. When two additional voltage probes are attached, the results show that at the Dirac point, both the real and imaginary parts of the impedance are negative. As the Fermi energy deviates from the Dirac point, the real part of impedance oscillates with its sign changing frequently, while the imaginary part becomes vanishingly small. The phase incoherent processes introduced by the voltage probes contribute to inelastic scattering and charge redistribution in the central device region. As a result, the measured conductance is substantially different from the two-terminal measurement of a perfect graphene nanoribbon, indicating the important role of voltage probes in realistic four-terminal measurement.

  18. Study of structural-mechanical properties of the ointment base

    Directory of Open Access Journals (Sweden)

    V. V. Rudenko

    2013-06-01

    Full Text Available The ENTRY. For the local treatment of surgical wounds basis of a medicine plays an important role in ensuring its therapeutic effect. Ointment framework depends on adequate frequency of applications, pharmacokinetics, therapeutic effect and absence/presence of side effects. Unjustifiable selected the basis of a medicinal product may cause not only the increase or reduction of the actions of the active substance, but also a total absence of it. The AIM of the WORK was to develop composition and technology of production of combined emulsion of a medicine for the treatment of surgical wounds that meet the modern medical-biological requirements. MATERIALS AND METHODS OF RESEARCH. Rheological studies carried out with the help of rotary viscometer with coaxial cylinders «Rheotest-2» (Germany. For the study took the hinge of a pilot sample. RESULTS AND THEIR DISCUSSION. Based on the biomedical requirements to create a combination of soft drugs for the treatment of wound healing we conducted research to establish ointments emulsion based on first order. As emulsifier of the first kind were used twin-80 and stearic acid, and emulsifier of the second kind - monostearat glycerin. For the comparative analysis was taken a comprehensive emulsifier No.1. It is established, that the use of a complex of emulsifiers stearic acid, emulsifier No.1 the highest structural-mechanical parameters have emulsion with the ratio of surface-active substances of 2.5 % and 5.5%, respectively. With the increase in the stearic acid emulsion was increase in the rheological parameters of the model for all shear rates. Also the composition of model samples at different ratios of emulsifier No.1 and the twin-80. Determined that the maximum value rheological parameters observed in the ratio of: emulsifier No.1-twin-80 (1:7. With the increase in the emulsions quantity of emulsifier No.1 rheological parameters increases sharply for all speeds of the shift. This non-linear dependence

  19. Structure-Based Design of Inhibitors Against Maltosyltransferase Glge

    Directory of Open Access Journals (Sweden)

    Junie B. Billones

    2014-09-01

    Full Text Available The emergence of Mycobacterium tuberculosis(Mtb drug resistant strains calls for research of novel anti-TB drugs. In this study,structure-based pharmacophore generation, virtual screening, molecular docking and de novolead optimization were employed in the search for possible inhibitors of MaltosyltransferaseGlgE enzyme,a recently validated anti-TB drug target. Chemical libraries containing only natural products were screened. The top hits were docked and the resulting leads were subsequently modified usingDe Novo Evolution. Three modified compounds were found to have greaterbinding energy than the substrate. All were derived from the lead compound ZINC39010596 (5,7-dihydroxy-2-propan-2-yl-8-[(2S,3R,4S,5S,6R-3,4,5-trihydroxy-6-(hydroxymethyltetrahydro-2H-pyran-2-yl]oxychromen-4-one. Toxicity predictions of these compounds revealed that they were non-carcinogenic, non-mutagenic, and biodegradable.

  20. Au-Based Catalysts: Electrochemical Characterization for Structural Insights

    Directory of Open Access Journals (Sweden)

    Valentina Pifferi

    2016-02-01

    Full Text Available Au-based catalysts are widely used in important processes because of their peculiar characteristics. The catalyst performance depends strongly on the nature and structure of the metal nanoparticles, especially in the case of bimetallic catalysts where synergistic effects between the two metals can be occasionally seen. In this paper, it is shown that electrochemical characterisation (cyclovoltammetry CV and electrochemical impedance spectroscopy EIS of AuPd systems can be used to determine the presence of an electronic interaction between the two metals, thus providing a strong support in the determination of the nature of the synergy between Au and Pd in the liquid phase oxidation of alcohols. However, it seems likely that the strong difference in the catalytic behavior between the single metals and the bimetallic system is connected not only to the redox behaviour, but also to the energetic balance between the different elementary steps of the reaction.

  1. Optimization of integer wavelet transforms based on difference correlation structures.

    Science.gov (United States)

    Li, Hongliang; Liu, Guizhong; Zhang, Zhongwei

    2005-11-01

    In this paper, a novel lifting integer wavelet transform based on difference correlation structure (DCCS-LIWT) is proposed. First, we establish a relationship between the performance of a linear predictor and the difference correlations of an image. The obtained results provide a theoretical foundation for the following construction of the optimal lifting filters. Then, the optimal prediction lifting coefficients in the sense of least-square prediction error are derived. DCCS-LIWT puts heavy emphasis on image inherent dependence. A distinct feature of this method is the use of the variance-normalized autocorrelation function of the difference image to construct a linear predictor and adapt the predictor to varying image sources. The proposed scheme also allows respective calculations of the lifting filters for the horizontal and vertical orientations. Experimental evaluation shows that the proposed method produces better results than the other well-known integer transforms for the lossless image compression.

  2. Molecular docking and structure-based drug design strategies.

    Science.gov (United States)

    Ferreira, Leonardo G; Dos Santos, Ricardo N; Oliva, Glaucius; Andricopulo, Adriano D

    2015-07-22

    Pharmaceutical research has successfully incorporated a wealth of molecular modeling methods, within a variety of drug discovery programs, to study complex biological and chemical systems. The integration of computational and experimental strategies has been of great value in the identification and development of novel promising compounds. Broadly used in modern drug design, molecular docking methods explore the ligand conformations adopted within the binding sites of macromolecular targets. This approach also estimates the ligand-receptor binding free energy by evaluating critical phenomena involved in the intermolecular recognition process. Today, as a variety of docking algorithms are available, an understanding of the advantages and limitations of each method is of fundamental importance in the development of effective strategies and the generation of relevant results. The purpose of this review is to examine current molecular docking strategies used in drug discovery and medicinal chemistry, exploring the advances in the field and the role played by the integration of structure- and ligand-based methods.

  3. Subgap transport in silicene-based superconducting hybrid structures

    Science.gov (United States)

    Li, Hai

    2016-08-01

    We investigate the influences of exchange field and perpendicular electric field on the subgap transport in silicene-based ferromagnetic/superconducting (FS) and ferromagnetic/superconducting/ferromagnetic (FSF) junctions. Owing to the unique buckling structure of silicene, the Andreev reflection and subgap conductance can be effectively modulated by a perpendicular electric field. It is revealed that the subgap conductance in the FS junction can be distinctly enhanced by an exchange field. Remarkably, resorting to the tunable band gap of silicene, an exclusive crossed Andreev reflection (CAR) process in the FSF junction can be realized within a wide range of related parameters. Moreover, in the FSF junction the exclusive CAR and exclusive elastic cotunneling processes can be switched by reversing the magnetization direction in one of the ferromagnetic regions.

  4. Analysis of Hongdao Clam Industrial Structure Based on Industry Chain

    Institute of Scientific and Technical Information of China (English)

    Jiang; Xianqiong

    2014-01-01

    The vertical and transverse structures of Hongdao clam industry are described and analyzed objectively based on the perspective of industry chain. On the basis of field investigation,the key nodes of Hongdao clam industry chain,including nursery,breeding,processing,transportation and sale,are analyzed. It can be concluded that the development of clam industry chain is unbalanced,especially the deep-processing capacity is not strong,and the development of supporting industy lags behind. The horizontal industry chain of clam needs to be further improved. The corresponding suggestions are put forward: strengthening research on new nursery technology in later period,further extending the horizontal industry chain of clam,mining the depth of clam-related leisure industry,and upgrading service level of leisure travel.

  5. Towards structural Web Services matching based on Kernel methods

    Institute of Scientific and Technical Information of China (English)

    NAN Kai; YU Jianjun; SU Hao; GUO Shengmin; ZHANG Hui; XU Ke

    2007-01-01

    This paper describes a kernel methods based Web Services matching mechanism for Web Services discovery and integration.The matching mechanism tries to exploit the latent semantics by the structure of Web Services.In this paper,Web Services are schemed by WSDL(Web Services Description Language)as tree-structured XML documents,and their matching degree is calculated by our novel algorithm designed for loosely tree matching against the traditional methods.In order to achieve the task,we bring forward the concept of path subsequence to model WSDL documents in the vector space.Then,an advanced n-spectrum kernel function is defined,so that the similarity of two WSDL documents can be drawn by implementing the kernel function in the space.Using textual similarity and n-spectrum kernel values as features of low-level and mid-level,we build up a model to estimate the functional similarity between Web Services,whose parameters are learned by a ranking-SVM.Finally,a set of experiments were designed to verify the model,and the results showed that several metrics for the retrieval of Web Services have been improved by our approach.

  6. Progress on Diamond-Based Cylindrical Dielectric Accelerating Structures

    Science.gov (United States)

    Kanareykin, A.; Schoessow, P.; Conde, M.; Gai, W.

    2006-11-01

    The development of a high gradient diamond-based cylindrical dielectric loaded accelerator (DLA) is presented. A diamond-loaded DLA can potentially sustain accelerating gradients far in excess of the limits experimentally observed for conventional metallic accelerating structures. The electrical and mechanical properties of diamond make it an ideal candidate material for use in dielectric accelerators: high rf breakdown level, extremely low dielectric losses and the highest available thermoconductive coefficient. We used the hot-filament Chemical Vapor Deposition (CVD) process to produce high quality 5-10 cm long cylindrical diamond layers. Our collaboration has also been developing a new method of CVD diamond surface preparation that reduces the secondary electron emission coefficient below unity. Special attention was paid to the numerical optimization of the waveguide to structure rf coupling section, where the surface magnetic and electric fields were minimized relative to the accelerating gradient and within known metal surface breakdown limits. We conclude with a brief overview of the use of diamond microstructures for use in compact rf sources.

  7. Frequency-based similarity detection of structures in human brain

    Science.gov (United States)

    Sims, Dave I.; Siadat, Mohammad-Reza

    2017-03-01

    Advancements in 3D scanning and volumetric imaging methods have motivated researchers to tackle new challenges related to storing, retrieving and comparing 3D models, especially in medical domain. Comparing natural rigid shapes and detecting subtle changes in 3D models of brain structures is of great importance. Precision in capturing surface details and insensitivity to shape orientation are highly desirable properties of good shape descriptors. In this paper, we propose a new method, Spherical Harmonics Distance (SHD), which leverages the power of spherical harmonics to provide more accurate representation of surface details. At the same time, the proposed method incorporates the features of a shape distribution method (D2) and inherits its insensitivity to shape orientation. Comparing SHD to a spherical harmonics based method (SPHARM) shows that the performance of the proposed method is less sensitive to rotation. Also, comparing SHD to D2 shows that the proposed method is more accurate in detecting subtle changes. The performance of the proposed method is verified by calculating the Fisher measure (FM) of extracted feature vectors. The FM of the vectors generated by SHD on average shows 27 times higher values than that of D2. Our preliminary results show that SHD successfully combines desired features from two different methods and paves the way towards better detection of subtle dissimilarities among natural rigid shapes (e.g. structures of interest in human brain). Detecting these subtle changes can be instrumental in more accurate diagnosis, prognosis and treatment planning.

  8. Glass-based confined structures enabling light control

    Energy Technology Data Exchange (ETDEWEB)

    Chiappini, Andrea; Normani, Simone; Chiasera, Alessandro [IFN–CNR CSMFO Lab., and FBK Photonics Unit via alla Cascata 56/C Povo, 38123 Trento (Italy); Lukowiak, Anna [Institute of Low Temperature and Structure Research PAS, Okolna St. 2, 50-422 Wroclaw (Poland); Vasilchenko, Iustyna [IFN–CNR CSMFO Lab., and FBK Photonics Unit via alla Cascata 56/C Povo, 38123 Trento (Italy); Dipartimento di Fisica, Università di Trento, via Sommarive 14 Povo, 38123Trento (Italy); Ristic, Davor [Institut Ruđer Bošković, Bijenička cesta 54, 10000 Zagreb (Croatia); Boulard, Brigitte [IMMM, CNRS Equipe Fluorures, Université du Maine, Av. Messiaen, 72085 Le Mans cedex 9 (France); Dorosz, Dominik [Department of Power Engineering, Photonics and Lighting Technology, Bialystok University of Technology, Wiejska Street 45D, 15-351 Bialystok (Poland); Scotognella, Francesco [Center for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, Via Giovanni Pascoli, 70/3, 20133, Milan (Italy); Politecnico di Milano, Dipartimento di Fisica and Istituto di Fotonica e Nanotecnologie CNR, Piazza Leonardo da Vinci 32, 20133 Milano (Italy); Vaccari, Alessandro [FBK -CMM, ARES Unit, 38123 Trento (Italy); Taccheo, Stefano [College of Engineering, Swansea University, Singleton Park, SA2 8PP, Swansea (United Kingdom); Pelli, Stefano; Righini, Giancarlo C. [IFAC - CNR, MiPLab., 50019 Sesto Fiorentino (Italy); Museo Storico della Fisica e Centro di Studi e Ricerche “Enrico Fermi”, Piazza del Viminale 1, 00184 Roma (Italy); Conti, Gualtiero Nunzi [IFAC - CNR, MiPLab., 50019 Sesto Fiorentino (Italy); Ramponi, Roberta [Politecnico di Milano, Dipartimento di Fisica and Istituto di Fotonica e Nanotecnologie CNR, Piazza Leonardo da Vinci 32, 20133 Milano (Italy); and others

    2015-04-24

    When a luminescent ion is confined in a system characterized by one or more specific properties such as spatial size, geometrical dimension and shape, refractive index, local crystal field, cut-off vibrational energy and so on, it's possible to control its emission. The control of branching ratios as a function of the composition, the luminescence enhancement induced by a photonic crystal, or the laser action in a microresonator, are well known examples of light control. Photonic glass-based structures are extremely viable systems to exploit the above mentioned properties and in our research team we have successfully fabricated luminescent photonic structures by different techniques, including sol-gel, rf sputtering, drawing, melting, and physical vapour deposition. Here we will discuss some of them with the aim to make the reader aware of the chemical-physical properties related to each specific system. We will demonstrate that glass ceramic waveguides in some cases present superior spectroscopic properties in respect to the parent glass, that compositional properties can play a positive role in reducing luminescence quenching and in developing novel planar waveguides and fibers, that colloids allow to obtain high internal quantum efficiency and that photonic crystals, microcavities and microresonators can enable the handling of the rare earth luminescence. Finally, the pros and cons of the systems and of the different techniques employed for their fabrication will be discussed and some perspectives concerning the glass photonics will be proposed looking at both possible applications and investigation of physical properties.

  9. Thermodynamic and structural properties of Bi-based liquid alloys

    Science.gov (United States)

    Yadav, S. K.; Jha, L. N.; Adhikari, D.

    2015-10-01

    Thermodynamic and microscopic structural properties of two Bi-based liquid alloys, such as In-Bi at 900 K and Tl-Bi at 750 K have been studied employing the regular associated solution model. We have estimated the mole fractions of the complexes and the free monomers assuming the existence of complexes In2 Bi in In-Bi melt and TlBi in Tl-Bi melt. The thermodynamic properties have been studied by computing the Gibbs free energy of mixing, enthalpy of mixing, entropy of mixing and activities of the monomers. The compositional contributions of the heat associated with the formation of complexes and the heat of mixing of the monomers to the net enthalpy change has also been studied. The structural properties of the liquid alloys have been studied by computing concentration fluctuation in the long-wavelength limit, chemical short-range order parameter and the ratio of mutual to intrinsic diffusion coefficients. For both of the alloy systems, the theoretical as well as the experimental values of SCC (0) are found to be lower than the corresponding ideal values over the whole composition range, indicating the hetero-coordinating nature of Bi-In and Bi-Tl alloy melts. All the interaction energy parameters are found to be negative and temperature dependent, and both the alloy systems are found to be weakly interacting.

  10. High efficient solar tracker based on a simple shutter structure

    Science.gov (United States)

    Chen, Jin-Jia; Liu, Te-Shu; Huang, Kuang-Lung; Lin, Po-Chih

    2013-09-01

    In many photovoltaic (PV) or sunlight-illumination systems, solar trackers are always essential to obtain high energy/flux concentration efficiency, and that would lead to increase cost and extra power consumption due to the complex structure and heavy weight of the trackers. To decrease the cost while without sacrificing efficiency, a Fresnellens concentrator incorporated with a simple and cheap shutter, which consists of high reflective mirrors instead of conventional trackers, is proposed in this paper to provide solar tracking during the daytime. Thus, the time-variant and slant-incident sunlight rays can be redirected to vertically incident upon the surface of the Fresnel lens by appropriately arranging mirrors and swinging them to the proper slant angles with respect to the orientation of sunlight. The computer simulation results show that power concentration efficiency over 90%, as compared with the efficiency of directly normal incident sunlight, can be achieved with the mirror reflectance of 0.97 and for any solar incident angle within +/-75 degrees to the normal of the Fresnel lens. To verify the feasibility and performance of the concentrator with the proposed shutter, a sunlight illumination system based on this novel structure is demonstrated. Both computer simulation and practical measurement results for the prototype of the sunlight illumination system are also given to compare with. The results prove the simple and high efficient shutter applicable to general PV or sunlight-illumination systems for solar tracking.

  11. A Lightweight Structure Redesign Method Based on Selective Laser Melting

    Directory of Open Access Journals (Sweden)

    Li Tang

    2016-11-01

    Full Text Available The purpose of this paper is to present a new design method of lightweight parts fabricated by selective laser melting (SLM based on the “Skin-Frame” and to explore the influence of fabrication defects on SLM parts with different sizes. Some standard lattice parts were designed according to the Chinese GB/T 1452-2005 standard and manufactured by SLM. Then these samples were tested in an MTS Insight 30 compression testing machine to study the trends of the yield process with different structure sizes. A set of standard cylinder samples were also designed according to the Chinese GB/T 228-2010 standard. These samples, which were made of iron-nickel alloy (IN718, were also processed by SLM, and then tested in the universal material testing machine INSTRON 1346 to obtain their tensile strength. Furthermore, a lightweight redesigned method was researched. Then some common parts such as a stopper and connecting plate were redesigned using this method. These redesigned parts were fabricated and some application tests have already been performed. The compression testing results show that when the minimum structure size is larger than 1.5 mm, the mechanical characteristics will hardly be affected by process defects. The cylinder parts were fractured by the universal material testing machine at about 1069.6 MPa. These redesigned parts worked well in application tests, with both the weight and fabrication time of these parts reduced more than 20%.

  12. Structured Light-Based 3D Reconstruction System for Plants.

    Science.gov (United States)

    Nguyen, Thuy Tuong; Slaughter, David C; Max, Nelson; Maloof, Julin N; Sinha, Neelima

    2015-07-29

    Camera-based 3D reconstruction of physical objects is one of the most popular computer vision trends in recent years. Many systems have been built to model different real-world subjects, but there is lack of a completely robust system for plants. This paper presents a full 3D reconstruction system that incorporates both hardware structures (including the proposed structured light system to enhance textures on object surfaces) and software algorithms (including the proposed 3D point cloud registration and plant feature measurement). This paper demonstrates the ability to produce 3D models of whole plants created from multiple pairs of stereo images taken at different viewing angles, without the need to destructively cut away any parts of a plant. The ability to accurately predict phenotyping features, such as the number of leaves, plant height, leaf size and internode distances, is also demonstrated. Experimental results show that, for plants having a range of leaf sizes and a distance between leaves appropriate for the hardware design, the algorithms successfully predict phenotyping features in the target crops, with a recall of 0.97 and a precision of 0.89 for leaf detection and less than a 13-mm error for plant size, leaf size and internode distance.

  13. Structured Light-Based 3D Reconstruction System for Plants

    Directory of Open Access Journals (Sweden)

    Thuy Tuong Nguyen

    2015-07-01

    Full Text Available Camera-based 3D reconstruction of physical objects is one of the most popular computer vision trends in recent years. Many systems have been built to model different real-world subjects, but there is lack of a completely robust system for plants. This paper presents a full 3D reconstruction system that incorporates both hardware structures (including the proposed structured light system to enhance textures on object surfaces and software algorithms (including the proposed 3D point cloud registration and plant feature measurement. This paper demonstrates the ability to produce 3D models of whole plants created from multiple pairs of stereo images taken at different viewing angles, without the need to destructively cut away any parts of a plant. The ability to accurately predict phenotyping features, such as the number of leaves, plant height, leaf size and internode distances, is also demonstrated. Experimental results show that, for plants having a range of leaf sizes and a distance between leaves appropriate for the hardware design, the algorithms successfully predict phenotyping features in the target crops, with a recall of 0.97 and a precision of 0.89 for leaf detection and less than a 13-mm error for plant size, leaf size and internode distance.

  14. Structure-based design of a new bisintercalating anthracycline antibiotic.

    Science.gov (United States)

    Chaires, J B; Leng, F; Przewloka, T; Fokt, I; Ling, Y H; Perez-Soler, R; Priebe, W

    1997-01-31

    A new bisintercalating anthracycline antibiotic, WP631, has been designed and synthesized. The rational design of the new compound was based upon the geometry of monomeric anthracyclines bound to DNA oligonucleotides observed in high-resolution crystal structures. Monomeric units of daunorubicin have been linked through their reactive 3' NH2 substituents on the daunosamine moieties to form the new bisanthracycline WP631. Viscosity studies confirmed that WP631 binds to DNA by bisintercalation. Differential scanning calorimetry and UV melting experiments were used to measure the ultratight binding of WP631 to DNA. The binding constant for the interaction of WP631 with herring sperm DNA was determined to be 2.7 x 10(11) M-1 at 20 degrees C. The large, favorable binding free energy of -15.3 kcal mol-1 was found to result from a large, negative enthalpic contribution of -30.2 kcal mol-1. A molecular model was generated that shows the favorable stereochemical fit of the linker in the DNA minor groove. The cytotoxicity of WP631 was compared to that of doxorubicin using MCF-7-sensitive and MCF-7/VP-16 MRP-mediated multidrug-resistant cell lines. These initial studies showed that while WP631 is slightly less cytotoxic than doxorubicin in the sensitive cell line, it appears to overcome MRP-mediated multidrug resistance and was much more cytotoxic against the MCF-7/VP-16 cell line than was doxorubicin. The design of new potential anticancer agents based on known structural principles was found to produce a compound with significantly increased DNA binding affinity and with interesting biological activity.

  15. Optimum design of lander structure based on finite element method

    Institute of Scientific and Technical Information of China (English)

    WANG Chuang; LIU Rong-qiang; DENG Zong-quan; GAO Hai-bo

    2009-01-01

    Three kinds of possible structures of legged lander including monocoqe, semi-monoeoqe and space frame are compared, and the lightest space frame structure is selected as the lander's structure. Then, a new lander with four-legged truss structure is proposed. In the premise of ensuring that the main and assistant structures of landing legs are not changed, six possible lander body structures of the new lander are put forward.Taking the section size of each component of lander as design variables, and taking the total mass of the structure as the objective function, the six structures are analyzed by using the software Altair. OptiStruct and the resuits show that the mass of the basic structure is the lightest, and it is selected as the final design scheme of lander due to its simple structure and convenient manufacture. The optimization on the selected lander structure is conducted, and the detailed results are presented.

  16. Reconstructing Carotenoid-Based and Structural Coloration in Fossil Skin.

    Science.gov (United States)

    McNamara, Maria E; Orr, Patrick J; Kearns, Stuart L; Alcalá, Luis; Anadón, Pere; Peñalver, Enrique

    2016-04-25

    Evidence of original coloration in fossils provides insights into the visual communication strategies used by ancient animals and the functional evolution of coloration over time [1-7]. Hitherto, all reconstructions of the colors of reptile integument and the plumage of fossil birds and feathered dinosaurs have been of melanin-based coloration [1-6]. Extant animals also use other mechanisms for producing color [8], but these have not been identified in fossils. Here we report the first examples of carotenoid-based coloration in the fossil record, and of structural coloration in fossil integument. The fossil skin, from a 10 million-year-old colubrid snake from the Late Miocene Libros Lagerstätte (Teruel, Spain) [9, 10], preserves dermal pigment cells (chromatophores)-xanthophores, iridophores, and melanophores-in calcium phosphate. Comparison with chromatophore abundance and position in extant reptiles [11-15] indicates that the fossil snake was pale-colored in ventral regions; dorsal and lateral regions were green with brown-black and yellow-green transverse blotches. Such coloration most likely functioned in substrate matching and intraspecific signaling. Skin replicated in authigenic minerals is not uncommon in exceptionally preserved fossils [16, 17], and dermal pigment cells generate coloration in numerous reptile, amphibian, and fish taxa today [18]. Our discovery thus represents a new means by which to reconstruct the original coloration of exceptionally preserved fossil vertebrates.

  17. Novel indexes based on network structure to indicate financial market

    Science.gov (United States)

    Zhong, Tao; Peng, Qinke; Wang, Xiao; Zhang, Jing

    2016-02-01

    There have been various achievements to understand and to analyze the financial market by complex network model. However, current studies analyze the financial network model but seldom present quantified indexes to indicate or forecast the price action of market. In this paper, the stock market is modeled as a dynamic network, in which the vertices refer to listed companies and edges refer to their rank-based correlation based on price series. Characteristics of the network are analyzed and then novel indexes are introduced into market analysis, which are calculated from maximum and fully-connected subnets. The indexes are compared with existing ones and the results confirm that our indexes perform better to indicate the daily trend of market composite index in advance. Via investment simulation, the performance of our indexes is analyzed in detail. The results indicate that the dynamic complex network model could not only serve as a structural description of the financial market, but also work to predict the market and guide investment by indexes.

  18. Structural Topology Design of Container Ship Based on Knowledge-Based Engineering and Level Set Method

    Institute of Scientific and Technical Information of China (English)

    崔进举; 王德禹; 史琪琪

    2015-01-01

    Knowledge-Based Engineering (KBE) is introduced into the ship structural design in this paper. From the implementation of KBE, the design solutions for both Rules Design Method (RDM) and Interpolation Design Method (IDM) are generated. The corresponding Finite Element (FE) models are generated. Topological design of the longitudinal structures is studied where the Gaussian Process (GP) is employed to build the surrogate model for FE analysis. Multi-objective optimization methods inspired by Pareto Front are used to reduce the design tank weight and outer surface area simultaneously. Additionally, an enhanced Level Set Method (LSM) which employs implicit algorithm is applied to the topological design of typical bracket plate which is used extensively in ship structures. Two different sets of boundary conditions are considered. The proposed methods show satisfactory efficiency and accuracy.

  19. Nano-based sensor for assessment of weaponry structural degradation

    Science.gov (United States)

    Brantley, Christina L.; Edwards, Eugene; Ruffin, Paul B.; Kranz, Michael

    2016-04-01

    Missiles and weaponry-based systems are composed of metal structures that can degrade after prolonged exposure to environmental elements. A particular concern is accumulation of corrosion that generally results from prolonged environmental exposure. Corrosion, defined as the unintended destruction or deterioration of a material due to its interaction with the environment, can negatively affect both equipment and infrastructure. System readiness and safety can be reduced if corrosion is not detected, prevented and managed. The current corrosion recognition methods (Visual, Radiography, Ultrasonics, Eddy Current, and Thermography) are expensive and potentially unreliable. Visual perception is the most commonly used method for determining corrosion in metal. Utilization of an inductance-based sensor system is being proposed as part of the authors' research. Results from this research will provide a more efficient, economical, and non-destructive sensing approach. Preliminary results demonstrate a highly linear degradation within a corrosive environment due to the increased surface area available on the sensor coupon. The inductance of the devices, which represents a volume property of the coupon, demonstrated sensitivity to corrosion levels. The proposed approach allows a direct mass-loss measurement based on the change in the inductance of the coupon when placed in an alternating magnetic field. Prototype devices have demonstrated highly predictable corrosion rates that are easily measured using low-power small electronic circuits and energy harvesting methods to interrogate the sensor. Preliminary testing demonstrates that the device concept is acceptable and future opportunities for use in low power embedded applications are achievable. Key results in this paper include the assessment of typical Army corrosion cost, degradation patterns of varying metal materials, and application of wireless sensors elements.

  20. Micromechanics based simulation of ductile fracture in structural steels

    Science.gov (United States)

    Yellavajjala, Ravi Kiran

    The broader aim of this research is to develop fundamental understanding of ductile fracture process in structural steels, propose robust computational models to quantify the associated damage, and provide numerical tools to simplify the implementation of these computational models into general finite element framework. Mechanical testing on different geometries of test specimens made of ASTM A992 steels is conducted to experimentally characterize the ductile fracture at different stress states under monotonic and ultra-low cycle fatigue (ULCF) loading. Scanning electron microscopy studies of the fractured surfaces is conducted to decipher the underlying microscopic damage mechanisms that cause fracture in ASTM A992 steels. Detailed micromechanical analyses for monotonic and cyclic loading are conducted to understand the influence of stress triaxiality and Lode parameter on the void growth phase of ductile fracture. Based on monotonic analyses, an uncoupled micromechanical void growth model is proposed to predict ductile fracture. This model is then incorporated in to finite element program as a weakly coupled model to simulate the loss of load carrying capacity in the post microvoid coalescence regime for high triaxialities. Based on the cyclic analyses, an uncoupled micromechanics based cyclic void growth model is developed to predict the ULCF life of ASTM A992 steels subjected to high stress triaxialities. Furthermore, a computational fracture locus for ASTM A992 steels is developed and incorporated in to finite element program as an uncoupled ductile fracture model. This model can be used to predict the ductile fracture initiation under monotonic loading in a wide range of triaxiality and Lode parameters. Finally, a coupled microvoid elongation and dilation based continuum damage model is proposed, implemented, calibrated and validated. This model is capable of simulating the local softening caused by the various phases of ductile fracture process under

  1. Virus-like particle-based human vaccines: quality assessment based on structural and functional properties.

    Science.gov (United States)

    Zhao, Qinjian; Li, Shaowei; Yu, Hai; Xia, Ningshao; Modis, Yorgo

    2013-11-01

    Human vaccines against three viruses use recombinant virus-like particles (VLPs) as the antigen: hepatitis B virus, human papillomavirus, and hepatitis E virus. VLPs are excellent prophylactic vaccine antigens because they are self-assembling bionanoparticles (20 to 60 nm in diameter) that expose multiple epitopes on their surface and faithfully mimic the native virions. Here we summarize the long journey of these vaccines from bench to patients. The physical properties and structural features of each recombinant VLP vaccine are described. With the recent licensure of Hecolin against hepatitis E virus adding a third disease indication to prophylactic VLP-based vaccines, we review how the crucial quality attributes of VLP-based human vaccines against all three disease indications were assessed, controlled, and improved during bioprocessing through an array of structural and functional analyses.

  2. Structural Response Analysis under Dependent Variables Based on Probability Boxes

    National Research Council Canada - National Science Library

    Xiao, Z; Yang, G

    2015-01-01

      This paper considers structural response analysis when structural uncertainty parameters distribution cannot be specified precisely due to lack of information and there are complex dependencies in the variables...

  3. MODELING METHOD FOR PRODUCT STRUCTURE MAPPING BASED ON REVERSE SOLVING OF LOCUS AND MOTION

    Institute of Scientific and Technical Information of China (English)

    ZHANG Shuyou; YI Guodong; XU Xiaofeng

    2007-01-01

    Aiming at the problem of structure design in reverse-design of mechanism, a structure mapping method based on reverse solving of locus and motion (RSLM) is presented. The mechanism scheme meeting the requirements of geometric and structural features is obtained through RSLM. The element instance subsets related to component are established based on the element type mapping, pair structure type mapping and design knowledge mapping between components and elements layer by layer. The assembly position mapping of elements is established based on the topological structure information of mechanism scheme, and the product modeling of structure mapping is realized. The algorithm program and prototype system of product structure mapping based on RSLM are developed. Application samples show that the method implements the integration of scheme design, assembly design and structure design, and modeling for product structure mapping based on RSLM. The feasibility of assembly is analyzed in scheme design that contributes to reducing the design error, and raising the design efficiency and quality.

  4. ASSESSMENT OF CHAROLAIS BULLS POPULATION STRUCTURE BASED ON SNPs ANALYSES

    Directory of Open Access Journals (Sweden)

    Nina Moravčíková

    2014-02-01

    Full Text Available The aim of this study was identification of SNPs in leptin (LEP, leptin receptor (LEPR, growth hormone (GH and specific pituitary transcription factor (Pit-1 genes in order to analyze genetic structure of Charolais bulls’ population. The total numbers of genomic DNA samples were taken from 52 breeding bulls and analyzed by PCR-RFLP method. After digestion with restriction enzymes were detected in bulls’ population alleles with frequency: LEP/Sau3AI A 0.83 and B 0.17 (±0.037; LEPR/BseGI C 0.95 and T 0.05 (±0.021, GH/AluI L 0.62 and V 0.38 (±0.048 and Pit1/HinfI A 0.40 and B 0.60 (±0.048. Based on the observed vs. expected genotypes frequencies population across loci were in Hardy-Weinberg equilibrium (P>0.05, only in case of Pit-1 locus was detected disequilibrium. Predominant were in analyzed breeding bulls LEP/Sau3AIAA (0.69, LEPR/T945MCC (0.90, GH/AluILL (0.43 and Pit-1/HinfIAB (0.65 genotypes. The observed heterozygosity of SNPs was also transferred to the low (LEP/Sau3AI/0.248 and LEPR/T945M/0.088 or median polymorphic information content (GH/AluI/0.366 and Pit-1/HinfI/0.370. Within genetic variability estimating negative (LEPR/T945M and Pit-1/HinfI and positive values (LEP/Sau3AI and GH/AluI of fixation indexes FIS indicating slight heterozygote excess or deficiency based on analyzed genetic marker were observed.

  5. Electronic Structure of Graphene and Germanene Based on Double Hexagonal Structure

    Science.gov (United States)

    Naji, S.; Belhaj, A.; Labrim, H.; Benyoussef, A.; El Kenz, A.

    2013-11-01

    In this paper, we study the electronic structure of monolayer materials based on a double hexagonal geometry with (1×1) and (√ 3 × √ 3)R30o superstructures. Inspired from the two-dimensional root system of an exceptional Lie algebra called G2, this hexagonal atomic configuration involves two hexagons of unequal side length at angle 30°. The principal unit hexagonal cell contains twelve atoms instead of the usual configuration involving only six ones relying only on the (1×1) superstructure. Using ab initio calculations based on FPLO9.00-34 code, we investigate numerically the graphene and the germanene with the double hexagonal geometry. In particular, we find that the usual electronic properties and the lattice parameters of such materials are modified. More precisely, the lattice parameters are increased. It has been shown that, in the single hexagonal geometry, the grapheme and the germanene behave as a gapless semiconductor and a semi-metallic, respectively. In double hexagonal geometry however, both materials becomes metallic.

  6. Electronic structure of nitride-based quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Winkelnkemper, Momme

    2008-11-07

    In the present work the electronic and optical properties of In{sub x}Ga{sub 1-x}N/GaN and GaN/AlN QDs are studied by means of eight-band k.p theory. Experimental results are interpreted in detail using the theoretical results. The k.p model for the QD electronicstructure calculations accounts for strain, piezo- and pyroelectric effects, spin-orbit and crystal-field splitting, and is implemented for arbitrarily shaped QDs on a finite differences grid. Few-particle corrections are included using the self-consistent Hartree method. Band parameters for the wurtzite and zinc-blende phases of GaN, AlN, and InN are derived from first-principle G{sub 0}W{sub 0} band-structure calculations. Reliable values are also provided for parameters that have not been determined experimentally yet. The electronic properties of nitride QDs are dominated by the large built-in piezo- and pyroelectric fields, which lead to a pronounced red-shift of excitonic transition energies and extremely long radiative lifetimes in large GaN/AlN QDs. In In{sub x}Ga{sub 1-x}N/GaN QDs these fields induce a pronounced dependence of the radiative excitonic lifetimes on the exact QD shape and composition. It is demonstrated that the resulting variations of the radiative lifetimes in an inhomogeneous QD ensemble are the origin of the multi-exponential luminescence decay frequently observed in time-resolved ensemble measurements on In{sub x}Ga{sub 1-x}N/GaN QDs. A polarization mechanism in nitride QDs based on strain-induced valence-band mixing effects is discovered. Due to the valence-band structure of wurtzite group-III nitrides and the specific strain situation in c-plane QDs, the confined hole states are formed predominantly by the two highest valence bands. In particular, the hole ground state (h{sub 0} {identical_to} h{sub A}) is formed by the A band, and the first excited hole state (h{sub 1} {identical_to} h{sub B}) by the B band. It is shown that the interband transitions involving h{sub A} or h

  7. An ISVD-based Euclidian structure from motion for smartphones

    Science.gov (United States)

    Masiero, A.; Guarnieri, A.; Vettore, A.; Pirotti, F.

    2014-06-01

    The development of Mobile Mapping systems over the last decades allowed to quickly collect georeferenced spatial measurements by means of sensors mounted on mobile vehicles. Despite the large number of applications that can potentially take advantage of such systems, because of their cost their use is currently typically limited to certain specialized organizations, companies, and Universities. However, the recent worldwide diffusion of powerful mobile devices typically embedded with GPS, Inertial Navigation System (INS), and imaging sensors is enabling the development of small and compact mobile mapping systems. More specifically, this paper considers the development of a 3D reconstruction system based on photogrammetry methods for smartphones (or other similar mobile devices). The limited computational resources available in such systems and the users' request for real time reconstructions impose very stringent requirements on the computational burden of the 3D reconstruction procedure. This work takes advantage of certain recently developed mathematical tools (incremental singular value decomposition) and of photogrammetry techniques (structure from motion, Tomasi-Kanade factorization) to access very computationally efficient Euclidian 3D reconstruction of the scene. Furthermore, thanks to the presence of instrumentation for localization embedded in the device, the obtained 3D reconstruction can be properly georeferenced.

  8. Synthesis, structural and fungicidal studies of hydrazone based coordination compounds.

    Science.gov (United States)

    Sharma, Amit Kumar; Chandra, Sulekh

    2013-02-15

    The coordination compounds of the Co(II), Ni(II) and Cu(II) metal ions derived from imine based ligand, benzil bis(carbohydarzone) were structurally and pharmaceutically studied. The compounds have the general stoichiometry [M(L)]X(2) and [Co(L)X(2)], where M=Ni(II) and Cu(II), and X=NO(3)(-) and Cl(-) ions. The analytical techniques like elemental analyses, molar conductance measurements, magnetic susceptibility measurements, IR, UV/Visible, NMR, ESI mass and EPR were used to study the compounds. The key IR bands, i.e., amide I, amide II and amide III stretching vibrations accounts for the tetradentate metal binding nature of the ligand. The electronic and EPR spectral results suggest the square planar Ni(II) and Cu(II) complexes (g(iso)=2.11-2.22) and tetragonal geometry Co(II) complexes (g(iso)=2.10-2.17). To explore the compounds in the biological field, they were examined against the opportunistic pathogens, i.e., Alternaria brassicae, Aspergillus niger and Fusarium oxysporum. The partial covalent character of metal-ligand bond is supported by the orbital reduction factor k (0.62-0.92) and nephalauxetic parameter β (0.55-0.57).

  9. Structural controllability of complex networks based on preferential matching.

    Science.gov (United States)

    Zhang, Xizhe; Lv, Tianyang; Yang, XueYing; Zhang, Bin

    2014-01-01

    Minimum driver node sets (MDSs) play an important role in studying the structural controllability of complex networks. Recent research has shown that MDSs tend to avoid high-degree nodes. However, this observation is based on the analysis of a small number of MDSs, because enumerating all of the MDSs of a network is a #P problem. Therefore, past research has not been sufficient to arrive at a convincing conclusion. In this paper, first, we propose a preferential matching algorithm to find MDSs that have a specific degree property. Then, we show that the MDSs obtained by preferential matching can be composed of high- and medium-degree nodes. Moreover, the experimental results also show that the average degree of the MDSs of some networks tends to be greater than that of the overall network, even when the MDSs are obtained using previous research method. Further analysis shows that whether the driver nodes tend to be high-degree nodes or not is closely related to the edge direction of the network.

  10. [Sub-field imaging spectrometer design based on Offner structure].

    Science.gov (United States)

    Wu, Cong-Jun; Yan, Chang-Xiang; Liu, Wei; Dai, Hu

    2013-08-01

    To satisfy imaging spectrometers's miniaturization, lightweight and large field requirements in space application, the current optical design of imaging spectrometer with Offner structure was analyzed, and an simple method to design imaging spectrometer with concave grating based on current ways was given. Using the method offered, the sub-field imaging spectrometer with 400 km altitude, 0.4-1.0 microm wavelength range, 5 F-number of 720 mm focal length and 4.3 degrees total field was designed. Optical fiber was used to transfer the image in telescope's focal plane to three slits arranged in the same plane so as to achieve subfield. The CCD detector with 1 024 x 1 024 and 18 microm x 18 microm was used to receive the image of the three slits after dispersing. Using ZEMAX software optimization and tolerance analysis, the system can satisfy 5 nm spectrum resolution and 5 m field resolution, and the MTF is over 0.62 with 28 lp x mm(-1). The field of the system is almost 3 times that of similar instruments used in space probe.

  11. Molecular Docking and Structure-Based Drug Design Strategies

    Directory of Open Access Journals (Sweden)

    Leonardo G. Ferreira

    2015-07-01

    Full Text Available Pharmaceutical research has successfully incorporated a wealth of molecular modeling methods, within a variety of drug discovery programs, to study complex biological and chemical systems. The integration of computational and experimental strategies has been of great value in the identification and development of novel promising compounds. Broadly used in modern drug design, molecular docking methods explore the ligand conformations adopted within the binding sites of macromolecular targets. This approach also estimates the ligand-receptor binding free energy by evaluating critical phenomena involved in the intermolecular recognition process. Today, as a variety of docking algorithms are available, an understanding of the advantages and limitations of each method is of fundamental importance in the development of effective strategies and the generation of relevant results. The purpose of this review is to examine current molecular docking strategies used in drug discovery and medicinal chemistry, exploring the advances in the field and the role played by the integration of structure- and ligand-based methods.

  12. Prediction of Silicon-Based Layered Structures for Optoelectronic Applications

    Science.gov (United States)

    Luo, Wei; Ma, Yanming; Gong, Xingao; Xiang, Hongjun; CCMG Team

    2015-03-01

    A method based on the particle swarm optimization (PSO) algorithm is presented to design quasi-two-dimensional (Q2D) materials. With this development, various single-layer and bi-layer materials in C, Si, Ge, Sn, and Pb were predicted. A new Si bi-layer structure is found to have a much-favored energy than the previously widely accepted configuration. Both single-layer and bi-layer Si materials have small band gaps, limiting their usages in optoelectronic applications. Hydrogenation has therefore been used to tune the electronic and optical properties of Si layers. We discover two hydrogenated materials of layered Si8H2andSi6H2 possessing quasi-direct band gaps of 0.75 eV and 1.59 eV, respectively. Their potential applications for light emitting diode and photovoltaics are proposed and discussed. Our study opened up the possibility of hydrogenated Si layered materials as next-generation optoelectronic devices.

  13. An endoscopic 3D scanner based on structured light.

    Science.gov (United States)

    Schmalz, Christoph; Forster, Frank; Schick, Anton; Angelopoulou, Elli

    2012-07-01

    We present a new endoscopic 3D scanning system based on Single Shot Structured Light. The proposed design makes it possible to build an extremely small scanner. The sensor head contains a catadioptric camera and a pattern projection unit. The paper describes the working principle and calibration procedure of the sensor. The prototype sensor head has a diameter of only 3.6mm and a length of 14mm. It is mounted on a flexible shaft. The scanner is designed for tubular cavities and has a cylindrical working volume of about 30mm length and 30mm diameter. It acquires 3D video at 30 frames per second and typically generates approximately 5000 3D points per frame. By design, the resolution varies over the working volume, but is generally better than 200μm. A prototype scanner has been built and is evaluated in experiments with phantoms and biological samples. The recorded average error on a known test object was 92μm.

  14. Auction-based resource allocation game under a hierarchical structure

    Science.gov (United States)

    Cui, Yingying; Zou, Suli; Ma, Zhongjing

    2016-01-01

    This paper studies a class of auction-based resource allocation games under a hierarchical structure, such that each supplier is assigned a certain amount of resource from a single provider and allocates it to its buyers with auction mechanisms. To implement the efficient allocations for the underlying hierarchical system, we first design an auction mechanism, for each local system composed of a supplier and its buyers, which inherits the advantages of the progressive second price mechanism. By employing a dynamic algorithm, each local system converges to its own efficient Nash equilibrium, at which the efficient resource allocation is achieved and the bidding prices of all the buyers in this local system are identical with each other. After the local systems reach their own equilibria respectively, the resources assigned to suppliers are readjusted via a dynamic hierarchical algorithm with respect to the bidding prices associated with the implemented equilibria of local systems. By applying the proposed hierarchical process, the formulated hierarchical system can converge to the efficient allocation under certain mild conditions. The developed results in this work are demonstrated with simulations.

  15. Neutrino-nucleus reactions based on recent structure studies

    Energy Technology Data Exchange (ETDEWEB)

    Suzuki, Toshio [Department of Physics and Graduate School of Integrated Basic Sciences, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550 (Japan); National Astronomical Observatory of Japan, Mitaka, Tokyo 181-8588 (Japan)

    2015-05-15

    Neutrino-nucleus reactions are studied with the use of new shell model Hamiltonians, which have proper tensor components in the interactions and prove to be successful in the description of Gamow-Teller (GT) strengths in nuclei. The new Hamiltonians are applied to obtain new neutrino-nucleus reaction cross sections in {sup 12}C, {sup 13}C, {sup 56}Fe and {sup 56}Ni induced by solar and supernova neutrinos. The element synthesis by neutrino processes in supernova explosions is discussed with the new cross sections. The enhancement of the production yields of {sup 7}Li, {sup 11}B and {sup 55}Mn is obtained while fragmented GT strength in {sup 56}Ni with two-peak structure is found to result in smaller e-capture rates at stellar environments. The monopole-based universal interaction with tensor force of π+ρ meson exchanges is used to evaluate GT strength in {sup 40}Ar and ν-induced reactions on {sup 40}Ar. It is found to reproduce well the experimental GT strength in {sup 40}Ar.

  16. Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Sung-Hou; Shin, Dong Hae; Hou, Jingtong; Chandonia, John-Marc; Das, Debanu; Choi, In-Geol; Kim, Rosalind; Kim, Sung-Hou

    2007-09-02

    Advances in sequence genomics have resulted in an accumulation of a huge number of protein sequences derived from genome sequences. However, the functions of a large portion of them cannot be inferred based on the current methods of sequence homology detection to proteins of known functions. Three-dimensional structure can have an important impact in providing inference of molecular function (physical and chemical function) of a protein of unknown function. Structural genomics centers worldwide have been determining many 3-D structures of the proteins of unknown functions, and possible molecular functions of them have been inferred based on their structures. Combined with bioinformatics and enzymatic assay tools, the successful acceleration of the process of protein structure determination through high throughput pipelines enables the rapid functional annotation of a large fraction of hypothetical proteins. We present a brief summary of the process we used at the Berkeley Structural Genomics Center to infer molecular functions of proteins of unknown function.

  17. Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.

    Science.gov (United States)

    Shin, Dong Hae; Hou, Jingtong; Chandonia, John-Marc; Das, Debanu; Choi, In-Geol; Kim, Rosalind; Kim, Sung-Hou

    2007-09-01

    Advances in sequence genomics have resulted in an accumulation of a huge number of protein sequences derived from genome sequences. However, the functions of a large portion of them cannot be inferred based on the current methods of sequence homology detection to proteins of known functions. Three-dimensional structure can have an important impact in providing inference of molecular function (physical and chemical function) of a protein of unknown function. Structural genomics centers worldwide have been determining many 3-D structures of the proteins of unknown functions, and possible molecular functions of them have been inferred based on their structures. Combined with bioinformatics and enzymatic assay tools, the successful acceleration of the process of protein structure determination through high throughput pipelines enables the rapid functional annotation of a large fraction of hypothetical proteins. We present a brief summary of the process we used at the Berkeley Structural Genomics Center to infer molecular functions of proteins of unknown function.

  18. Ionic liquids based on dicyanamide anion: influence of structural variations in cationic structures on ionic conductivity.

    Science.gov (United States)

    Yoshida, Yukihiro; Baba, Osamu; Saito, Gunzi

    2007-05-10

    A series of dicyanamide [N(CN)2]-based ionic liquids were prepared using 1-alkyl-3-methylimidazolium cations with different alkyl chain lengths and ethyl-containing heterocyclic cations with different ring structures, and the influence of such structural variations on their thermal property, density, electrochemical window, viscosity, ionic conductivity, and solvatochromic effects was investigated. We found that the 1,3-dimethylimidazolium salt shows the highest ionic conductivity among ionic liquids free from halogenated anions (3.6 x 10(-2) S cm(-1) at 25 degrees C), and the elongation of the alkyl chain causes the pronounced depression of fluidity and ionic conductivity. Also, such an elongation gives rise to the increase in the degree of ion association in the liquids, mainly caused by the van der Waals interactions between alkyl chains. N(CN)2 salts with 1-ethyl-2-methylpyrazolium (EMP) and N-ethyl-N-methylpyrrolidinium (PY(12)) cations as well as 1-ethyl-3-methylimidazolium (EMI) cation are liquids at room temperature (RT), while the N-ethylthiazolium salt shows a melting event at higher temperature (57 degrees C). Among the three RT ionic liquids with ethyl-containing cations, RT ionic conductivity follows the order EMI > PY(12) > EMP, which does not coincide with the order of fluidity at RT (EMI > EMP > PY(12)). Such a discrepancy is originated from a high degree of ion dissociation in the PY(12) salt, which was manifested in the Walden rule deviation and solvatochromic effects. A series of N(CN)2/C(CN)3 binary mixtures of the EMI salts were also prepared. RT ionic conductivity decreases linearly with increasing the molar fraction of C(CN)3 anion.

  19. A novel two-stage discrete crack method based on the screened Poisson equation and local mesh refinement

    Science.gov (United States)

    Areias, P.; Rabczuk, T.; de Sá, J. César

    2016-12-01

    We propose an alternative crack propagation algorithm which effectively circumvents the variable transfer procedure adopted with classical mesh adaptation algorithms. The present alternative consists of two stages: a mesh-creation stage where a local damage model is employed with the objective of defining a crack-conforming mesh and a subsequent analysis stage with a localization limiter in the form of a modified screened Poisson equation which is exempt of crack path calculations. In the second stage, the crack naturally occurs within the refined region. A staggered scheme for standard equilibrium and screened Poisson equations is used in this second stage. Element subdivision is based on edge split operations using a constitutive quantity (damage). To assess the robustness and accuracy of this algorithm, we use five quasi-brittle benchmarks, all successfully solved.

  20. Novel optical filters based on curved grating structure

    Science.gov (United States)

    Wang, Jia-Xian; Zhao, Jing; Qiu, Weibin; Lin, Zhili; Huang, Yixin; Chen, Houbo; Qiu, Pingping

    2017-03-01

    A novel modified Rowland grating structure is proposed in this paper. Optical filters with the proposed structure are designed and fabricated with both high input and output angles. The passband width, coupling loss of the filters are investigated as a function of the output waveguide width. Nearly aberration free diffraction filters with an ultracompact footprint less than 0.5 mm2 were obtained with the proposed structure.

  1. Trends in information theory-based chemical structure codification.

    Science.gov (United States)

    Barigye, Stephen J; Marrero-Ponce, Yovani; Pérez-Giménez, Facundo; Bonchev, Danail

    2014-08-01

    This report offers a chronological review of the most relevant applications of information theory in the codification of chemical structure information, through the so-called information indices. Basically, these are derived from the analysis of the statistical patterns of molecular structure representations, which include primitive global chemical formulae, chemical graphs, or matrix representations. Finally, new approaches that attempt to go "back to the roots" of information theory, in order to integrate other information-theoretic measures in chemical structure coding are discussed.

  2. X-ray structure based evaluation of analogs of citalopram

    DEFF Research Database (Denmark)

    Topiol, Sid; Bang-Andersen, Benny; Sanchez, Connie

    2017-01-01

    analogs, showing distinct structure-activity relationship (SAR) at both sites that is independent of the SAR at the other site. Analogs with a higher affinity and selectivity than benchmark R-Citalopram (R-Cit) for the S2 versus the S1 site were identified. We deploy structural and computational analyses...... to explain this SAR and demonstrate the potential utility of the newly emerging X-ray structures within the neurotransmitter:sodium Symporter family for drug design....

  3. Metamaterial based embedded acoustic filters for structural applications

    Directory of Open Access Journals (Sweden)

    Hongfei Zhu

    2013-09-01

    Full Text Available We investigate the use of acoustic metamaterials to design structural materials with frequency selective characteristics. By exploiting the properties of acoustic metamaterials, we tailor the propagation characteristics of the host structure to effectively filter the constitutive harmonics of an incoming broadband excitation. The design approach exploits the characteristics of acoustic waveguides coupled by cavity modes. By properly designing the cavity we can tune the corresponding resonant mode and, therefore, coupling the waveguide at a prescribed frequency. This structural design can open new directions to develop broadband passive vibrations and noise control systems fully integrated in structural components.

  4. Stochastic Finite Elements in Reliability-Based Structural Optimization

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Engelund, S.

    1995-01-01

    Application of stochastic finite elements in structural optimization is considered. It is shown how stochastic fields modelling e.g. the modulus of elasticity can be discretized in stochastic variables and how a sensitivity analysis of the reliability of a structural system with respect to optimi......Application of stochastic finite elements in structural optimization is considered. It is shown how stochastic fields modelling e.g. the modulus of elasticity can be discretized in stochastic variables and how a sensitivity analysis of the reliability of a structural system with respect...

  5. Stochastic Finite Elements in Reliability-Based Structural Optimization

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Engelund, S.

    Application of stochastic finite elements in structural optimization is considered. It is shown how stochastic fields modelling e.g. the modulus of elasticity can be discretized in stochastic variables and how a sensitivity analysis of the reliability of a structural system with respect to optimi......Application of stochastic finite elements in structural optimization is considered. It is shown how stochastic fields modelling e.g. the modulus of elasticity can be discretized in stochastic variables and how a sensitivity analysis of the reliability of a structural system with respect...

  6. Synthesis, structural, spectroscopic and biological studies of Schiff base complexes

    Science.gov (United States)

    Diab, M. A.; El-Sonbati, A. Z.; Shoair, A. F.; Eldesoky, A. M.; El-Far, N. M.

    2017-08-01

    Schiff base ligand 4-((pyridin-2- yl)methyleneamino)-1,2-dihydro-2,3-dimethyl-1-phenylpyrazol-5-one (PDMP) and its complexes were prepared and characterized on the basis of elemental analysis, IR, mass spectra and thermogravimetric analysis. All results confirm that the complexes have 1:1 (M: PMDP) stoichiometric formula [M(PMDP)Cl2H2O ] (M = Cu(II), Co(II), Ni(II) and Mn(II)), [Cd(PMDP)Cl2] and the ligand behaves as a bi/tridentate forming five-membered chelating ring towards the metal ions, bonding through azomethine nitrogen/exocyclic carbonyl oxygen, azomethine pyridine nitrogen and exocyclic carbonyl oxygen. The shift in the band positions of the groups involved in coordination has been utilized to estimate the metal-nitrogen and/or oxygen bond lengths. The complexes of Co(II), Ni(II) and Cu(II) are paramagnetic and the magnetic as well as spectral data suggest octahedral geometry, whereas the Cd(II) complex is tetrahedral. The XRD studies show that both the ligand and its metal complexes (1 and 3) show polycrystalline with crystal structure. Molecular docking was used to predict the binding between PMDP ligand and the receptors. The corrosion inhibition of mild steel in 2 M HCl solution by PDMP was explored utilizing potentiodynamic polarization, electrochemical impedance spectroscopy (EIS) and (EFM) electrochemical frequency modulation method. Potentiodynamic polarization demonstrated that PDMP compound is mixed-type inhibitor. EIS spectra exhibit one capacitive loop and confirm the protective ability. The percentage of inhibition efficiency was found to increase with increasing the inhibitor concentration.

  7. Structure-based substrate screening for an enzyme

    Directory of Open Access Journals (Sweden)

    Wei Dongzhi

    2009-08-01

    Full Text Available Abstract Background Nowadays, more and more novel enzymes can be easily found in the whole enzyme pool with the rapid development of genetic operation. However, experimental work for substrate screening of a new enzyme is laborious, time consuming and costly. On the other hand, many computational methods have been widely used in lead screening of drug design. Seeing that the ligand-target protein system in drug design and the substrate-enzyme system in enzyme applications share the similar molecular recognition mechanism, we aim to fulfill the goal of substrate screening by in silico means in the present study. Results A computer-aided substrate screening (CASS system which was based on the enzyme structure was designed and employed successfully to help screen substrates of Candida antarctica lipase B (CALB. In this system, restricted molecular docking which was derived from the mechanism of the enzyme was applied to predict the energetically favorable poses of substrate-enzyme complexes. Thereafter, substrate conformation, distance between the oxygen atom of the alcohol part of the ester (in some compounds, this oxygen atom was replaced by nitrogen atom of the amine part of acid amine or sulfur atom of the thioester and the hydrogen atom of imidazole of His224, distance between the carbon atom of the carbonyl group of the compound and the oxygen atom of hydroxyl group of Ser105 were used sequentially as the criteria to screen the binding poses. 223 out of 233 compounds were identified correctly for the enzyme by this screening system. Such high accuracy guaranteed the feasibility and reliability of the CASS system. Conclusion The idea of computer-aided substrate screening is a creative combination of computational skills and enzymology. Although the case studied in this paper is tentative, high accuracy of the CASS system sheds light on the field of computer-aided substrate screening.

  8. Evaluation of structural safety of existing structures, based on actual material properties and geometry

    NARCIS (Netherlands)

    Bijlaard, F.S.K.

    1999-01-01

    This paper presents an overview of the structural assessment of existing structures in comparison to that of newly designed structures. The role of measuring geometrical data and testing the material properties is explained. The method provides objective criteria to judge the safety of existing stru

  9. Tensor based structure estimation in multi-channel images

    DEFF Research Database (Denmark)

    Schou, Jesper; Dierking, Wolfgang; Skriver, Henning

    2000-01-01

    . In the second part tensors are used for representing the structure information. This approach has the advantage, that tensors can be averaged either spatially or by applying several images, and the resulting tensor provides information of the average strength as well as orientation of the structure...

  10. Statistical analysis of minimum cost path based structural brain connectivity

    NARCIS (Netherlands)

    De Boer, R.; Schaap, M.; Van der Lijn, F.; Vrooman, H.A.; De Groot, M.; Van der Lugt, A.; Ikram, M.A.; Vernooij, M.W.; Breteler, M.M.B.; Niessen, W.J.

    2010-01-01

    Diffusion MRI can be used to study the structural connectivity within the brain. Brain connectivity is often represented by a binary network whose topology can be studied using graph theory. We present a framework for the construction of weighted structural brain networks, containing information abo

  11. Gradient-based optimization in nonlinear structural dynamics

    DEFF Research Database (Denmark)

    Dou, Suguang

    The intrinsic nonlinearity of mechanical structures can give rise to rich nonlinear dynamics. Recently, nonlinear dynamics of micro-mechanical structures have contributed to developing new Micro-Electro-Mechanical Systems (MEMS), for example, atomic force microscope, passive frequency divider, fr...

  12. Structural similarity based kriging for quantitative structure activity and property relationship modeling.

    Science.gov (United States)

    Teixeira, Ana L; Falcao, Andre O

    2014-07-28

    Structurally similar molecules tend to have similar properties, i.e. closer molecules in the molecular space are more likely to yield similar property values while distant molecules are more likely to yield different values. Based on this principle, we propose the use of a new method that takes into account the high dimensionality of the molecular space, predicting chemical, physical, or biological properties based on the most similar compounds with measured properties. This methodology uses ordinary kriging coupled with three different molecular similarity approaches (based on molecular descriptors, fingerprints, and atom matching) which creates an interpolation map over the molecular space that is capable of predicting properties/activities for diverse chemical data sets. The proposed method was tested in two data sets of diverse chemical compounds collected from the literature and preprocessed. One of the data sets contained dihydrofolate reductase inhibition activity data, and the second molecules for which aqueous solubility was known. The overall predictive results using kriging for both data sets comply with the results obtained in the literature using typical QSPR/QSAR approaches. However, the procedure did not involve any type of descriptor selection or even minimal information about each problem, suggesting that this approach is directly applicable to a large spectrum of problems in QSAR/QSPR. Furthermore, the predictive results improve significantly with the similarity threshold between the training and testing compounds, allowing the definition of a confidence threshold of similarity and error estimation for each case inferred. The use of kriging for interpolation over the molecular metric space is independent of the training data set size, and no reparametrizations are necessary when more compounds are added or removed from the set, and increasing the size of the database will consequentially improve the quality of the estimations. Finally it is shown

  13. Prediction of protein continuum secondary structure with probabilistic models based on NMR solved structures

    Directory of Open Access Journals (Sweden)

    Bailey Timothy L

    2006-02-01

    Full Text Available Abstract Background The structure of proteins may change as a result of the inherent flexibility of some protein regions. We develop and explore probabilistic machine learning methods for predicting a continuum secondary structure, i.e. assigning probabilities to the conformational states of a residue. We train our methods using data derived from high-quality NMR models. Results Several probabilistic models not only successfully estimate the continuum secondary structure, but also provide a categorical output on par with models directly trained on categorical data. Importantly, models trained on the continuum secondary structure are also better than their categorical counterparts at identifying the conformational state for structurally ambivalent residues. Conclusion Cascaded probabilistic neural networks trained on the continuum secondary structure exhibit better accuracy in structurally ambivalent regions of proteins, while sustaining an overall classification accuracy on par with standard, categorical prediction methods.

  14. Stochastic margin-based structure learning of Bayesian network classifiers.

    Science.gov (United States)

    Pernkopf, Franz; Wohlmayr, Michael

    2013-02-01

    The margin criterion for parameter learning in graphical models gained significant impact over the last years. We use the maximum margin score for discriminatively optimizing the structure of Bayesian network classifiers. Furthermore, greedy hill-climbing and simulated annealing search heuristics are applied to determine the classifier structures. In the experiments, we demonstrate the advantages of maximum margin optimized Bayesian network structures in terms of classification performance compared to traditionally used discriminative structure learning methods. Stochastic simulated annealing requires less score evaluations than greedy heuristics. Additionally, we compare generative and discriminative parameter learning on both generatively and discriminatively structured Bayesian network classifiers. Margin-optimized Bayesian network classifiers achieve similar classification performance as support vector machines. Moreover, missing feature values during classification can be handled by discriminatively optimized Bayesian network classifiers, a case where purely discriminative classifiers usually require mechanisms to complete unknown feature values in the data first.

  15. Community structure of complex networks based on continuous neural network

    Science.gov (United States)

    Dai, Ting-ting; Shan, Chang-ji; Dong, Yan-shou

    2017-09-01

    As a new subject, the research of complex networks has attracted the attention of researchers from different disciplines. Community structure is one of the key structures of complex networks, so it is a very important task to analyze the community structure of complex networks accurately. In this paper, we study the problem of extracting the community structure of complex networks, and propose a continuous neural network (CNN) algorithm. It is proved that for any given initial value, the continuous neural network algorithm converges to the eigenvector of the maximum eigenvalue of the network modularity matrix. Therefore, according to the stability of the evolution of the network symbol will be able to get two community structure.

  16. High-Throughput Sequencing Based Methods of RNA Structure Investigation

    DEFF Research Database (Denmark)

    Kielpinski, Lukasz Jan

    In this thesis we describe the development of four related methods for RNA structure probing that utilize massive parallel sequencing. Using them, we were able to gather structural data for multiple, long molecules simultaneously. First, we have established an easy to follow experimental and comp......In this thesis we describe the development of four related methods for RNA structure probing that utilize massive parallel sequencing. Using them, we were able to gather structural data for multiple, long molecules simultaneously. First, we have established an easy to follow experimental...... and computational protocol for detecting the reverse transcription termination sites (RTTS-Seq). This protocol was subsequently applied to hydroxyl radical footprinting of three dimensional RNA structures to give a probing signal that correlates well with the RNA backbone solvent accessibility. Moreover, we applied...

  17. Vibration based structural health monitoring in fibre reinforced composites employing the modal strain energy method

    NARCIS (Netherlands)

    Ooijevaar, T.H.; Loendersloot, R.; Warnet, L.L.; Boer, de A.; Akkerman, R.

    2009-01-01

    The feasibility of a vibration based damage identification method is shown. The Modal Strain Energy method is applied to a T-joint structure. Both finite element analysis and experimental validation of an undamaged and delaminated structure are presented.

  18. Automated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinement.

    Science.gov (United States)

    Xu, Dong; Zhang, Jian; Roy, Ambrish; Zhang, Yang

    2011-01-01

    I-TASSER is an automated pipeline for protein tertiary structure prediction using multiple threading alignments and iterative structure assembly simulations. In CASP9 experiments, two new algorithms, QUARK and fragment-guided molecular dynamics (FG-MD), were added to the I-TASSER pipeline for improving the structural modeling accuracy. QUARK is a de novo structure prediction algorithm used for structure modeling of proteins that lack detectable template structures. For distantly homologous targets, QUARK models are found useful as a reference structure for selecting good threading alignments and guiding the I-TASSER structure assembly simulations. FG-MD is an atomic-level structural refinement program that uses structural fragments collected from the PDB structures to guide molecular dynamics simulation and improve the local structure of predicted model, including hydrogen-bonding networks, torsion angles, and steric clashes. Despite considerable progress in both the template-based and template-free structure modeling, significant improvements on protein target classification, domain parsing, model selection, and ab initio folding of β-proteins are still needed to further improve the I-TASSER pipeline. Copyright © 2011 Wiley-Liss, Inc.

  19. Plasmon resonance optical tuning based on photosensitive composite structures

    DEFF Research Database (Denmark)

    Gilardi, Giovanni; Xiao, Sanshui; Mortensen, N. Asger

    2014-01-01

    This paper reports a numerical investigation of a periodic metallic structure sandwiched between two quartz plates. The volume comprised between the quartz plates and the metallic structure is infiltrated by a mixture of azo-dye-doped liquid crystal. The exposure to a low power visible light beam...... modifies the azo dye molecular configuration, thus allowing the wavelength shift of the resonance of the system. The wavelength shift depends on the geometry of the periodic structure and it also depends on the intensity of the visible light beam....

  20. Cold cathodes based on carbonic nanostructured layered structures

    Directory of Open Access Journals (Sweden)

    Belyanin A. F.

    2013-06-01

    Full Text Available The paper describes formation conditions for and the structure of diamond-like materials films used in the manufacture of layered cold cathodes of emission electronics devices. The authors study the structure and field emission properties of layered structures with polycluster diamond and diamond-like carbon films (DCF formed by various methods. It has been found that the best emission properties are characteristic of DCFs obtained by cathode sputtering. Emission from the surface of such films occurs on the boundaries of the globules.

  1. Electromagnetic Simulations of Helical-Based Ion Acceleration Structures

    CERN Document Server

    Nelson, Scott D; Caporaso, George; Friedman, Alex; Poole, Brian R; Waldron, William

    2005-01-01

    Helix structures have been proposed* for accelerating low energy ion beams using MV/m fields in order to increase the coupling effeciency of the pulsed power system and to tailor the electromagnetic wave propagation speed with the particle beam speed as the beam gains energy. Calculations presented here show the electromagnetic field as it propagates along the helix structure, field stresses around the helix structure (for voltage breakdown determination), optimizations to the helix and driving pulsed power waveform, and simulations showing test particles interacting with the simulated time varying fields.

  2. Topological Optimization of Continuum Structure based on ANSYS

    Directory of Open Access Journals (Sweden)

    Li Xue-ping

    2017-01-01

    Full Text Available Topology optimization is at the phase of structural concept design and the result of it is foundation for succeeding design, therefore, structural topology optimization is more important to engineering design. in this thesis, in order to seek the optimal structure shape of the winch’s mounting bracket of ROV simulator, topology optimization design of it by finite element analysis software ANSYS was carried out. the results show that the topology optimization method is an effective optimization method and indicate that the method is correct and effective, it has a certain engineering application prospect.

  3. Novel bio-based thermoset resins based on epoxidized vegetable oils for structural adhesives

    Science.gov (United States)

    Sivasubramanian, Shivshankar

    Conventional engineered wood composites are bonded for the most part through formaldehyde-based structural adhesives such as urea formaldehyde (UF), melamine formaldehyde (MF), phenol formaldehyde (PF) and resorcinol formaldehyde (RF). Formaldehyde is a known human carcinogen; the occupational exposure and emission after manufacturing of these binders is raising more and more concern. With increasing emphasis on environmental issues, there is clear incentive to replace these hazardous conventional formaldehyde-based binders with cco-friendly resins having similar properties but derived from renewable sources, bearing in mind the economics of the structural wood composite industry. In this thesis, the curing reaction of bio-derived epoxy thermosets with inexpensive, low-toxicity precursors, including polyimines and amino acids was investigated. Epoxidized linseed oil (ELO) and epoxidized soybean oil (ESO) were successfully crosslinked with both branched polyethyleneimine (PEI) and triethylenetetramine (fETA). Epoxidized castor oil (ECO) was crosslinked with polyethyleneimine (PEI), having different molecular weights. Curing conditions were optimized through solvent uptake and soluble fraction analysis. Finally, the mechanical properties of the optimized compositions of rigid bioepoxies were evaluated using dynamic mechanical rheological testing (DMRT). While not as stiff as conventional materials, optimized materials have sufficient room temperature moduli to show promise for coatings and as binders in engineered wood products.

  4. Effects of Piezoelectric (PZT) Sensor Bonding and the Characteristics of the Host Structure on Impedance Based Structural Health Monitoring

    Science.gov (United States)

    Jalloh, Abdul

    2005-01-01

    This study was conducted to investigate the effects of certain factors on the impedance signal in structural health monitoring. These factors were: the quality of the bond between the sensor and the host structure, and the characteristics of the host structure, such as geometry, mass, and material properties. This work was carried out to answer a set of questions, related to these factors, that were developed by the project team. The project team was comprised of Dr. Doug Ramers and Dr. Abdul Jalloh of the Summer Faculty Fellowship Program, Mr. Arnaldo Colon- Perez, a student intern from the University of Puerto Rico of Turabo, and Mr. John Lassiter and Mr. Bob Engberg of the Structural and Dynamics Test Group at NASA Marshall Space Flight Center (MSFC). This study was based on a review of the literature on structural health monitoring to investigate the factors referred to above because there was not enough time to plan and conduct the appropriate tests at MSFC during the tenure of the Summer Faculty Fellowship Program project members. The surveyed literature documents works on structural health monitoring that were based on laboratory tests that were conducted using bolted trusses and other civil engineering type structures for the most part. These are not the typical types of structures used in designing and building NASA s space vehicles and systems. It was therefore recommended that tests be conducted using NASA type structures, such as pressure vessels, to validate the observations made in this report.

  5. Structural Protein-based Flexible Whispering Gallery Mode Resonators

    CERN Document Server

    Yilmaz, Huzeyfe; Shreiner, Robert; Szwejkowski, Chester J; Jung, Huihun; Hopkins, Patrick; Ozdemir, Sahin Kaya; Yang, Lan; Demirel, Melik C

    2016-01-01

    Nature provides a set of solutions for photonic structures that are finely tuned, organically diverse and optically efficient. Exquisite knowledge of structure-property relationships in proteins aids in the design of materials with desired properties for building devices with novel functionalities, which are difficult to achieve or previously unattainable. Recent bio-inspired photonic platforms made from proteinaceous materials lay the groundwork for many functional device applications, such as electroluminescence in peptide nucleic acids1, multiphoton absorption in amyloid fibers2 and silk waveguides and inverse opals3-5. Here we report whispering-gallery-mode (WGM) microresonators fabricated entirely from semi-crystalline structural proteins (i.e., squid ring teeth, SRT, from Loligo vulgaris and its recombinant, and silk from Bombyx mori) with unconventional thermo-optic response. We present a striking example of how small modifications at the molecular level lead to structural changes and alter macroscopic...

  6. MULTILEVEL INDEX STRUCTURE FOR INFORMATION FILTERING BASED ON USER CHARACTERISTIC

    Institute of Scientific and Technical Information of China (English)

    He jun; Zhou Mingtian

    2001-01-01

    Aimed at information overload and personalized characteristic of user information requirement, this letter presents a type of multilevel index structure and algorithm which is applied to large scale information filtering system and has better performance and stronger scalability.

  7. Design of LTCC-based Ceramic Structure for Chemical Microreactor

    Directory of Open Access Journals (Sweden)

    D. Belavic

    2012-04-01

    Full Text Available The design of ceramic chemical microreactor for the production of hydrogen needed in portable polymer-electrolyte membrane (PEM fuel cells is presented. The microreactor was developed for the steam reforming of liquid fuels with water into hydrogen. The complex three-dimensional ceramic structure of the microreactor includes evaporator(s, mixer(s, reformer and combustor. Low-temperature co-fired ceramic (LTCC technology was used to fabricate the ceramic structures with buried cavities and channels, and thick-film technology was used to make electrical heaters, temperature sensors and pressure sensors. The final 3D ceramic structure consists of 45 LTCC tapes. The dimensions of the structure are 75 × 41 × 9 mm3 and the weight is about 73 g.

  8. Structure of histone-based chromatin in archaea

    National Research Council Canada - National Science Library

    Mattiroli, Francesca; Bhattacharyya, Sudipta; Dyer, Pamela N; White, Alison E; Sandman, Kathleen; Burkhart, Brett W; Byrne, Kyle R; Lee, Thomas; Aim, Natalie G; Santangelo, Thomas J; Reeve, John N; Luger, Karolin

    2017-01-01

    .... We report the crystal structure of an archaeal histone-DNA complex. DNA wraps around an extended polymer, formed by archaeal histone homodimers, in a quasi-continuous superhelix with the same geometry as DNA in the eukaryotic nucleosome...

  9. Inverse boundary element calculations based on structural modes

    DEFF Research Database (Denmark)

    Juhl, Peter Møller

    2007-01-01

    The inverse problem of calculating the flexural velocity of a radiating structure of a general shape from measurements in the field is often solved by combining a Boundary Element Method with the Singular Value Decomposition and a regularization technique. In their standard form these methods solve...... for the unknown normal velocities of the structure at the relatively large number of nodes in the numerical model. Efficiently the regularization technique smoothes the solution spatially, since a fast spatial variation is associated with high index singular values, which is filtered out or damped...... in the regularization. Hence, the effective number of degrees of freedom in the model is often much lower than the number of nodes in the model. The present paper deals with an alternative formulation possible for the subset of radiation problems in which a (structural) modal expansion is known for the structure...

  10. Shape Memory Alloy-Based Periodic Cellular Structures Project

    Data.gov (United States)

    National Aeronautics and Space Administration — This SBIR Phase II effort will continue to develop and demonstrate an innovative shape memory alloy (SMA) periodic cellular structural technology. Periodic cellular...

  11. Paired structures and other opposite-based models

    DEFF Research Database (Denmark)

    Rodríguez, J. Tinguaro; Franco, Camilo; Gómez, Daniel

    2015-01-01

    to a more complex valuation structure that still keeps the essence of being paired. In this way several neutral fuzzy sets can appear, in particular indeterminacy, ambivalence and conflict. Two consequences are then presented: on one hand, we will show how Atanassov´s Intuitionistic Fuzzy Sets can be viewed...... as a particular paired structure when the classical fuzzy negation is considered; on the other hand, the relationship of this model with bipolarity is reconsidered from our paired view....

  12. Decreasing Seismic Effects of Structures Using Base Isolation Systems

    OpenAIRE

    Baciu, Cristina-Elena; Atanasiu, Gabriela M.

    2014-01-01

    This paper presents many different energy dissipating dispositives that had been proposed to assist in mitigation the harmful effects of earthquakes on structures. The general details of the isolation systems were described, and a particular situation of an isolation system formed by elastomeric supports in the case study. Romania is a country with a strong seismicity, mainly in Vrancea zone, and the Earthquakes affect a large part of the state. To prevent any further structural damages, ...

  13. Structure analysis of growing network based on partial differential equations

    OpenAIRE

    Junbo JIA; Jin, Zhen

    2016-01-01

    The topological structure is one of the most important contents in the complex network research. Therein the node degree and the degree distribution are the most basic characteristic quantities to describe topological structure. In order to calculate the degree distribution, first of all, the node degree is considered as a continuous variable. Then, according to the Markov Property of growing network, the cumulative distribution function's evolution equation with time can be obtained. Finally...

  14. Structured light sheet fluorescence microscopy based on four beam interference.

    Science.gov (United States)

    Lei, Ming; Zumbusch, Andreas

    2010-08-30

    A 3D structured light sheet microscope using a four-faceted symmetric pyramid is presented. The sample is illuminated by the resulting four beam interference field. This approach combines advantages of standing wave and structured illumination microscopy. Examples of micrographs of fluorescently labeled Chinese hamster ovary (CHO) cells as well as of the compound eyes of drosophila are shown and the optical sectioning ability of our system is demonstrated. The capabilities and the limitations of the scheme are discussed.

  15. Distributed Damage Estimation for Prognostics based on Structural Model Decomposition

    Data.gov (United States)

    National Aeronautics and Space Administration — Model-based prognostics approaches capture system knowl- edge in the form of physics-based models of components that include how they fail. These methods consist of...

  16. Polylactide based nanocomposites: Processing, structure and performance relationship

    Science.gov (United States)

    Karami, Shahir

    The application of biodegradable polymers has been offered to the packing industry wishing to overcome the environmental consequence of employing the petroleum-based polymers. Furthermore, the unstable oil market urged the industry to look for the substitution of the renewable resources. Polylactide is known as the most popular biodegradable polymer developed on a large scale. Nevertheless, the growing contribution of polylactide to packing industry is somewhat restricted owing to its inherent brittleness and weak barrier properties. Therefore, the main objective of this thesis was defined to build a fundamental relationship between processing parameters and solid-state microstructure to improve the performance of polylactide. Polylactide nanocomposites were prepared through a multi-step melt compounding process. Dispersion of organically modified layered nanoparticles was detected by the WAXS and TEM characterizations, demonstrating the formation of intercalated nanocomposites. Relaxation spectrum exhibited the restricted dynamics of fraction of amorphous phase confined in polymer-particle interphase through dynamic rheological measurements. The fraction of rigid amorphous chains was estimated using TMDSC and DMA. This increased with nanoparticle content, levelling off upon the aggregation of nanoparticles. The annealing-induced molecular ordering was detected by FR-IR, increasing the rigid amorphous fraction. Cold crystallization was investigated during non-isothermal process using TMDSC. Crystallization kinetic was studied through the evaluation of Avrami parameters in isothermal process at the temperature range of Tg+30°C to Tg+70°C. The crystallization rate depressed with the nanoparticle content due to the enhanced fraction of rigid amorphous chains, as well as, the topological constraints derived from the formation of network structure. Nevertheless, the nanoparticles acted as heterogeneous nucleating sites upon devitrification of the rigid amorphous

  17. Vibration-based localisation of structural deterioration in frame-like civil engineering structures

    DEFF Research Database (Denmark)

    Ulriksen, Martin Dalgaard; Damkilde, Lars

    2016-01-01

    With the existing trend of minimising material use in typical frame-like civil engineering structures, such as buildings, bridges, and offshore platforms, these structures will typically be subjected to substantial wind induced vibrations. Besides being a source of disturbance for the occupants...

  18. Vibration-based localisation of structural deterioration in frame-like civil engineering structures

    DEFF Research Database (Denmark)

    Ulriksen, Martin Dalgaard; Damkilde, Lars

    2016-01-01

    With the existing trend of minimising material use in typical frame-like civil engineering structures, such as buildings, bridges, and offshore platforms, these structures will typically be subjected to substantial wind induced vibrations. Besides being a source of disturbance for the occupants...

  19. Comparison of sequence-based and structure-based phylogenetic trees of homologous proteins: Inferences on protein evolution

    Indian Academy of Sciences (India)

    S Balaji; N Srinivasan

    2007-01-01

    Several studies based on the known three-dimensional (3-D) structures of proteins show that two homologous proteins with insignificant sequence similarity could adopt a common fold and may perform same or similar biochemical functions. Hence, it is appropriate to use similarities in 3-D structure of proteins rather than the amino acid sequence similarities in modelling evolution of distantly related proteins. Here we present an assessment of using 3-D structures in modelling evolution of homologous proteins. Using a dataset of 108 protein domain families of known structures with at least 10 members per family we present a comparison of extent of structural and sequence dissimilarities among pairs of proteins which are inputs into the construction of phylogenetic trees. We find that correlation between the structure-based dissimilarity measures and the sequence-based dissimilarity measures is usually good if the sequence similarity among the homologues is about 30% or more. For protein families with low sequence similarity among the members, the correlation coefficient between the sequence-based and the structure-based dissimilarities are poor. In these cases the structure-based dendrogram clusters proteins with most similar biochemical functional properties better than the sequence-similarity based dendrogram. In multi-domain protein families and disulphide-rich protein families the correlation coefficient for the match of sequence-based and structure-based dissimilarity (SDM) measures can be poor though the sequence identity could be higher than 30%. Hence it is suggested that protein evolution is best modelled using 3-D structures if the sequence similarities (SSM) of the homologues are very low.

  20. Condition Based Maintenance of Space Exploration Vehicles Using Structural Health Monitoring Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Acellent Technologies proposes to develop an autonomous and automated diagnostic system for condition based maintenance (CBM) of safety critical structures for space...

  1. A methodological review of piezoelectric based acoustic wave generation and detection techniques for structural health monitoring

    National Research Council Canada - National Science Library

    Sun, Z; Rocha, B; Wu, K.-T; Mrad, N

    2013-01-01

    .... As condition based maintenance has emerged as a valuable approach to enhancing continued aircraft airworthiness while reducing the life cycle cost, its enabling structural health monitoring (SHM...

  2. Gamma radiation effects on siloxane-based additive manufactured structures

    Science.gov (United States)

    Schmalzer, Andrew M.; Cady, Carl M.; Geller, Drew; Ortiz-Acosta, Denisse; Zocco, Adam T.; Stull, Jamie; Labouriau, Andrea

    2017-01-01

    Siloxane-basedadditive manufactured structures prepared by the direct ink write (DIW) technology were exposed to ionizing irradiation in order to gauge radiolysis effects on structure-property relationships. These well-defined 3-D structures were subjected to moderate doses of gamma irradiation in an inert atmosphere and characterized by a suite of experimental methods. Changes in thermal, chemical, microstructure, and mechanical properties were evaluated by DSC, TGA, FT-IR, mass spectroscopy, EPR, solvent swelling, SEM, and uniaxial compressive load techniques. Our results demonstrated that 3-D structures made from aromatic-free siloxane resins exhibited hardening after being exposed to gamma radiation. This effect was accompanied by gas evolution, decreasing in crystallization levels, decreasing in solvent swelling and damage to the microstructure. Furthermore, long-lived radiation-induced radicals were not detected by EPR methods. Our results are consistent with cross-link formation being the dominant degradation mechanism over chain scission reactions. On the other hand, 3-D structures made from high phenyl content siloxane resins showed little radiation damage as evidenced by low off gassing.

  3. Structural assembly of molecular complexes based on residual dipolar couplings.

    Science.gov (United States)

    Berlin, Konstantin; O'Leary, Dianne P; Fushman, David

    2010-07-07

    We present and evaluate a rigid-body molecular docking method, called PATIDOCK, that relies solely on the three-dimensional structure of the individual components and the experimentally derived residual dipolar couplings (RDCs) for the complex. We show that, given an accurate ab initio predictor of the alignment tensor from a protein structure, it is possible to accurately assemble a protein-protein complex by utilizing the RDCs' sensitivity to molecular shape to guide the docking. The proposed docking method is robust against experimental errors in the RDCs and computationally efficient. We analyze the accuracy and efficiency of this method using experimental or synthetic RDC data for several proteins, as well as synthetic data for a large variety of protein-protein complexes. We also test our method on two protein systems for which the structure of the complex and steric-alignment data are available (Lys48-linked diubiquitin and a complex of ubiquitin and a ubiquitin-associated domain) and analyze the effect of flexible unstructured tails on the outcome of docking. The results demonstrate that it is fundamentally possible to assemble a protein-protein complex solely on the basis of experimental RDC data and the prediction of the alignment tensor from 3D structures. Thus, despite the purely angular nature of RDCs, they can be converted into intermolecular distance/translational constraints. Additionally, we show a method for combining RDCs with other experimental data, such as ambiguous constraints from interface mapping, to further improve structure characterization of protein complexes.

  4. Virtual earthquake engineering laboratory with physics-based degrading materials on parallel computers

    Science.gov (United States)

    Cho, In Ho

    For the last few decades, we have obtained tremendous insight into underlying microscopic mechanisms of degrading quasi-brittle materials from persistent and near-saintly efforts in laboratories, and at the same time we have seen unprecedented evolution in computational technology such as massively parallel computers. Thus, time is ripe to embark on a novel approach to settle unanswered questions, especially for the earthquake engineering community, by harmoniously combining the microphysics mechanisms with advanced parallel computing technology. To begin with, it should be stressed that we placed a great deal of emphasis on preserving clear meaning and physical counterparts of all the microscopic material models proposed herein, since it is directly tied to the belief that by doing so, the more physical mechanisms we incorporate, the better prediction we can obtain. We departed from reviewing representative microscopic analysis methodologies, selecting out "fixed-type" multidirectional smeared crack model as the base framework for nonlinear quasi-brittle materials, since it is widely believed to best retain the physical nature of actual cracks. Microscopic stress functions are proposed by integrating well-received existing models to update normal stresses on the crack surfaces (three orthogonal surfaces are allowed to initiate herein) under cyclic loading. Unlike the normal stress update, special attention had to be paid to the shear stress update on the crack surfaces, due primarily to the well-known pathological nature of the fixed-type smeared crack model---spurious large stress transfer over the open crack under nonproportional loading. In hopes of exploiting physical mechanism to resolve this deleterious nature of the fixed crack model, a tribology-inspired three-dimensional (3d) interlocking mechanism has been proposed. Following the main trend of tribology (i.e., the science and engineering of interacting surfaces), we introduced the base fabric of solid

  5. Structured matrix based methods for approximate polynomial GCD

    CERN Document Server

    Boito, Paola

    2011-01-01

    Defining and computing a greatest common divisor of two polynomials with inexact coefficients is a classical problem in symbolic-numeric computation. The first part of this book reviews the main results that have been proposed so far in the literature. As usual with polynomial computations, the polynomial GCD problem can be expressed in matrix form: the second part of the book focuses on this point of view and analyses the structure of the relevant matrices, such as Toeplitz, Toepliz-block and displacement structures. New algorithms for the computation of approximate polynomial GCD are presented, along with extensive numerical tests. The use of matrix structure allows, in particular, to lower the asymptotic computational cost from cubic to quadratic order with respect to polynomial degree. .

  6. Structure analysis of growing network based on partial differential equations

    Directory of Open Access Journals (Sweden)

    Junbo JIA

    2016-04-01

    Full Text Available The topological structure is one of the most important contents in the complex network research. Therein the node degree and the degree distribution are the most basic characteristic quantities to describe topological structure. In order to calculate the degree distribution, first of all, the node degree is considered as a continuous variable. Then, according to the Markov Property of growing network, the cumulative distribution function's evolution equation with time can be obtained. Finally, the partial differential equation (PDE model can be established through distortion processing. Taking the growing network with preferential and random attachment mechanism as an example, the PDE model is obtained. The analytic expression of degree distribution is obtained when this model is solved. Besides, the degree function over time is the same as the characteristic line of PDE. At last, the model is simulated. This PDE method of changing the degree distribution calculation into problem of solving PDE makes the structure analysis more accurate.

  7. Structural Bases of Stability-Function Tradeoffs in Enzymes

    Energy Technology Data Exchange (ETDEWEB)

    Beadle, Beth M; Shoichet, Brian K [NWU, MED

    2010-03-05

    The structures of enzymes reflect two tendencies that appear opposed. On one hand, they fold into compact, stable structures; on the other hand, they bind a ligand and catalyze a reaction. To be stable, enzymes fold to maximize favorable interactions, forming a tightly packed hydrophobic core, exposing hydrophilic groups, and optimizing intramolecular hydrogen-bonding. To be functional, enzymes carve out an active site for ligand binding, exposing hydrophobic surface area, clustering like charges, and providing unfulfilled hydrogen bond donors and acceptors. Using AmpC {beta}-lactamase, an enzyme that is well-characterized structurally and mechanistically, the relationship between enzyme stability and function was investigated by substituting key active-site residues and measuring the changes in stability and activity. Substitutions of catalytic residues Ser64, Lys67, Tyr150, Asn152, and Lys315 decrease the activity of the enzyme by 10{sup 3}-10{sup 5}-fold compared to wild-type. Concomitantly, many of these substitutions increase the stability of the enzyme significantly, by up to 4.7 kcal/mol. To determine the structural origins of stabilization, the crystal structures of four mutant enzymes were determined to between 1.90 {angstrom} and 1.50 {angstrom} resolution. These structures revealed several mechanisms by which stability was increased, including mimicry of the substrate by the substituted residue (S64D), relief of steric strain (S64G), relief of electrostatic strain (K67Q), and improved polar complementarity (N152H). These results suggest that the preorganization of functionality characteristic of active sites has come at a considerable cost to enzyme stability. In proteins of unknown function, the presence of such destabilized regions may indicate the presence of a binding site.

  8. Recreation of architectural structures using procedural modeling based on volumes

    Directory of Open Access Journals (Sweden)

    Santiago Barroso Juan

    2013-11-01

    Full Text Available While the procedural modeling of buildings and other architectural structures has evolved very significantly in recent years, there is noticeable absence of high-level tools that allow a designer, an artist or an historian, creating important buildings or architectonic structures in a particular city. In this paper we present a tool for creating buildings in a simple and clear, following rules that use the language and methodology of creating their own buildings, and hiding the user the algorithmic details of the creation of the model.

  9. An Adaptive Combinatorial Morphological Filter Based on Omnidirectional Structuring Elements

    Institute of Scientific and Technical Information of China (English)

    ZHAO Chunhui; HUI Junying; SUN Shenghe

    2001-01-01

    A new adaptive morphological filter is proposed in this paper. The filter utilizes the omnidirectional structuring elements and morphological open-closing or clos-opening operations. The outputs of the morphological operations by each structuring element are linear weighted processed by means of the adaptive method under the constrained least mean absolute (CLMA) error criterion. The new filter is applied to restore a noisy image and compared with the traditional morphological filters. The simulation results have shown that the new filter possesses effective noise suppression without blurring the geometrical features of the image.

  10. Knowledge base and neural network approach for protein secondary structure prediction.

    Science.gov (United States)

    Patel, Maulika S; Mazumdar, Himanshu S

    2014-11-21

    Protein structure prediction is of great relevance given the abundant genomic and proteomic data generated by the genome sequencing projects. Protein secondary structure prediction is addressed as a sub task in determining the protein tertiary structure and function. In this paper, a novel algorithm, KB-PROSSP-NN, which is a combination of knowledge base and modeling of the exceptions in the knowledge base using neural networks for protein secondary structure prediction (PSSP), is proposed. The knowledge base is derived from a proteomic sequence-structure database and consists of the statistics of association between the 5-residue words and corresponding secondary structure. The predicted results obtained using knowledge base are refined with a Backpropogation neural network algorithm. Neural net models the exceptions of the knowledge base. The Q3 accuracy of 90% and 82% is achieved on the RS126 and CB396 test sets respectively which suggest improvement over existing state of art methods.

  11. Protein Classification Based on Analysis of Local Sequence-Structure Correspondence

    Energy Technology Data Exchange (ETDEWEB)

    Zemla, A T

    2006-02-13

    The goal of this project was to develop an algorithm to detect and calculate common structural motifs in compared structures, and define a set of numerical criteria to be used for fully automated motif based protein structure classification. The Protein Data Bank (PDB) contains more than 33,000 experimentally solved protein structures, and the Structural Classification of Proteins (SCOP) database, a manual classification of these structures, cannot keep pace with the rapid growth of the PDB. In our approach called STRALCP (STRucture Alignment based Clustering of Proteins), we generate detailed information about global and local similarities between given set of structures, identify similar fragments that are conserved within analyzed proteins, and use these conserved regions (detected structural motifs) to classify proteins.

  12. Mining small RNA structure elements in untranslated regions of human and mouse mRNAs using structure-based alignment

    Directory of Open Access Journals (Sweden)

    Wen Dongrong

    2008-04-01

    Full Text Available Abstract Background UnTranslated Regions (UTRs of mRNAs contain regulatory elements for various aspects of mRNA metabolism, such as mRNA localization, translation, and mRNA stability. Several RNA stem-loop structures in UTRs have been experimentally identified, including the histone 3' UTR stem-loop structure (HSL3 and iron response element (IRE. These stem-loop structures are conserved among mammalian orthologs, and exist in a group of genes encoding proteins involved in the same biological pathways. It is not known to what extent RNA structures like these exist in all mammalian UTRs. Results In this paper we took a systematic approach, named GLEAN-UTR, to identify small stem-loop RNA structure elements in UTRs that are conserved between human and mouse orthologs and exist in multiple genes with common Gene Ontology terms. This approach resulted in 90 distinct RNA structure groups containing 748 structures, with HSL3 and IRE among the top hits based on conservation of structure. Conclusion Our result indicates that there may exist many conserved stem-loop structures in mammalian UTRs that are involved in coordinate post-transcriptional regulation of biological pathways.

  13. Fault Tolerant Control for Civil Structures Based on LMI Approach

    Directory of Open Access Journals (Sweden)

    Chunxu Qu

    2013-01-01

    Full Text Available The control system may lose the performance to suppress the structural vibration due to the faults in sensors or actuators. This paper designs the filter to perform the fault detection and isolation (FDI and then reforms the control strategy to achieve the fault tolerant control (FTC. The dynamic equation of the structure with active mass damper (AMD is first formulated. Then, an estimated system is built to transform the FDI filter design problem to the static gain optimization problem. The gain is designed to minimize the gap between the estimated system and the practical system, which can be calculated by linear matrix inequality (LMI approach. The FDI filter is finally used to isolate the sensor faults and reform the FTC strategy. The efficiency of FDI and FTC is validated by the numerical simulation of a three-story structure with AMD system with the consideration of sensor faults. The results show that the proposed FDI filter can detect the sensor faults and FTC controller can effectively tolerate the faults and suppress the structural vibration.

  14. Exploratory Visualization of Graphs Based on Community Structure

    Science.gov (United States)

    Liu, Yujie

    2013-01-01

    Communities, also called clusters or modules, are groups of nodes which probably share common properties and/or play similar roles within a graph. They widely exist in real networks such as biological, social, and information networks. Allowing users to interactively browse and explore the community structure, which is essential for understanding…

  15. Performance based investigations of structural systems under fire

    DEFF Research Database (Denmark)

    Gentili, Filippo; Crosti, Chiara; Giuliani, Luisa

    2010-01-01

    of the construction after this time cannot always be granted. This is even more true in case of unaccounted events like human errors or rare but severe occurrence like a fire after explosion, which cannot be contemplated in the usual design. Even if a structure could be hardly designed to resist fully integer all...

  16. A damage mechanics based approach to structural deterioration and reliability

    Energy Technology Data Exchange (ETDEWEB)

    Bhattcharya, B.; Ellingwood, B. [Johns Hopkins Univ., Baltimore, MD (United States). Dept. of Civil Engineering

    1998-02-01

    Structural deterioration often occurs without perceptible manifestation. Continuum damage mechanics defines structural damage in terms of the material microstructure, and relates the damage variable to the macroscopic strength or stiffness of the structure. This enables one to predict the state of damage prior to the initiation of a macroscopic flaw, and allows one to estimate residual strength/service life of an existing structure. The accumulation of damage is a dissipative process that is governed by the laws of thermodynamics. Partial differential equations for damage growth in terms of the Helmholtz free energy are derived from fundamental thermodynamical conditions. Closed-form solutions to the equations are obtained under uniaxial loading for ductile deformation damage as a function of plastic strain, for creep damage as a function of time, and for fatigue damage as function of number of cycles. The proposed damage growth model is extended into the stochastic domain by considering fluctuations in the free energy, and closed-form solutions of the resulting stochastic differential equation are obtained in each of the three cases mentioned above. A reliability analysis of a ring-stiffened cylindrical steel shell subjected to corrosion, accidental pressure, and temperature is performed.

  17. Electronic-Structure-Based Design of Ordered Alloys

    DEFF Research Database (Denmark)

    Bligaard, Thomas; Andersson, M.P.; Jacobsen, Karsten Wedel

    2006-01-01

    We describe some recent advances in the methodology of using electronic structure calculations for materials design. The methods have been developed for the design of ordered metallic alloys and metal alloy catalysts, but the considerations we present are relevant for the atomic-scale computation...

  18. Automated structural health monitoring based on adaptive kernel spectral clustering

    Science.gov (United States)

    Langone, Rocco; Reynders, Edwin; Mehrkanoon, Siamak; Suykens, Johan A. K.

    2017-06-01

    Structural health monitoring refers to the process of measuring damage-sensitive variables to assess the functionality of a structure. In principle, vibration data can capture the dynamics of the structure and reveal possible failures, but environmental and operational variability can mask this information. Thus, an effective outlier detection algorithm can be applied only after having performed data normalization (i.e. filtering) to eliminate external influences. Instead, in this article we propose a technique which unifies the data normalization and damage detection steps. The proposed algorithm, called adaptive kernel spectral clustering (AKSC), is initialized and calibrated in a phase when the structure is undamaged. The calibration process is crucial to ensure detection of early damage and minimize the number of false alarms. After the calibration, the method can automatically identify new regimes which may be associated with possible faults. These regimes are discovered by means of two complementary damage (i.e. outlier) indicators. The proposed strategy is validated with a simulated example and with real-life natural frequency data from the Z24 pre-stressed concrete bridge, which was progressively damaged at the end of a one-year monitoring period.

  19. PEG-bis phosphonic acid based ionic supramolecular structures

    DEFF Research Database (Denmark)

    Gonzalez, Lidia; Skov, Anne Ladegaard; Hvilsted, Søren

    2014-01-01

    A number of supramolecular structures are prepared by mixing stoichiometric amounts of a phosphonic acid terminated poly(ethylene glycol) with propargyl amine, hexamethylene diamine, tris(2-aminoethyl)amine, and the first generation of a poly(propylene imine) dendrimer in turn at room temperature...

  20. Structuring of expanded snacks based on patato ingredients : a review

    NARCIS (Netherlands)

    Sman, van der R.G.M.; Broeze, J.

    2013-01-01

    In this paper we review the current knowledge on the structuring via bubble expansion of starchy snacks, which are formulated on the basis of potato ingredients. These snacks are rarely discussed in scientific literature, but there are a scant number of patents dealing with various formulations and

  1. Vibration based structural health monitoring of composite skin-stiffener structures

    NARCIS (Netherlands)

    Ooijevaar, T.H.

    2014-01-01

    Composite materials combine a high strength and stiffness with a relatively low density. These materials can, however, exhibit complex types of damage, like transverse cracks and delaminations. These damage scenarios can severely influence the structural performance of a component. Periodic

  2. A novel predictor for protein structural class based on integrated information of the secondary structure sequence.

    Science.gov (United States)

    Zhang, Lichao; Zhao, Xiqiang; Kong, Liang; Liu, Shuxia

    2014-08-01

    The structural class has become one of the most important features for characterizing the overall folding type of a protein and played important roles in many aspects of protein research. At present, it is still a challenging problem to accurately predict protein structural class for low-similarity sequences. In this study, an 18-dimensional integrated feature vector is proposed by fusing the information about content and position of the predicted secondary structure elements. The consistently high accuracies of jackknife and 10-fold cross-validation tests on different low-similarity benchmark datasets show that the proposed method is reliable and stable. Comparison of our results with other methods demonstrates that our method is an effective computational tool for protein structural class prediction, especially for low-similarity sequences.

  3. Are institutional missions aligned with journal-based or document-based disciplinary structures?

    Energy Technology Data Exchange (ETDEWEB)

    Klavans, R.; Boyack, K.W.

    2016-07-01

    Missions represent the underlying purpose of an institution. These missions can be focused (finding a cure for cancer) or diverse (providing all health services to a local population). They might be aimed at basic research (finding new sub-atomic particles) or very applied (forecasting tomorrow’s weather). Missions can be extremely practical (building i-phones) or abstract (creating maps of scientific inquiry). Our primary focus is on those institutions that are also contributing to society’s knowledge about scientific and technical phenomena. The publications of these institutions are, to some degree, an implicit statement of their mission. Institutions focusing on a cure for cancer will publish articles associated with cancer, while hospitals will publish in a diverse set of medical specialties. Institutions focused on subatomic particles publish in specialized physics journals. While the publication profile of an institution is obviously not the same as an institution’s mission, it is typically consistent with its mission. In this study we analyze the publication profiles of over 4400 institutions using Scopus data to determine if their institutional missions are best explained using a journal-based classification system or a document-based classification system. The structure of this article is as follows. The background section places this work in the context of two streams of research – the accuracies of different document classification systems, and the effect of different national contexts (specifically wealth, health and democracy) on science systems and their impact. We then describe our data and methods before addressing two questions: Do the missions of certain types of institutions align with journal-based or article-based disciplines, and does this vary with national context (wealth, health and democracy). We conclude with a discussion of limitations and possible areas for further investigation. (Author)

  4. Agent Types and Structures based on Analysis of Building Design

    DEFF Research Database (Denmark)

    Hartvig, Susanne C

    1997-01-01

    Based on an anaysis of building design an initial division of design agent into five classes: information collectors, generators, modifiers amd evaluators is presented.......Based on an anaysis of building design an initial division of design agent into five classes: information collectors, generators, modifiers amd evaluators is presented....

  5. Structure-based analysis of HU-DNA binding.

    Science.gov (United States)

    Swinger, Kerren K; Rice, Phoebe A

    2007-01-26

    HU and IHF are prokaryotic proteins that induce very large bends in DNA. They are present in high concentrations in the bacterial nucleoid and aid in chromosomal compaction. They also function as regulatory cofactors in many processes, such as site-specific recombination and the initiation of replication and transcription. HU and IHF have become paradigms for understanding DNA bending and indirect readout of sequence. While IHF shows significant sequence specificity, HU binds preferentially to certain damaged or distorted DNAs. However, none of the structurally diverse HU substrates previously studied in vitro is identical with the distorted substrates in the recently published Anabaena HU(AHU)-DNA cocrystal structures. Here, we report binding affinities for AHU and the DNA in the cocrystal structures. The binding free energies for formation of these AHU-DNA complexes range from approximately 10-14.5 kcal/mol, representing K(d) values in the nanomolar to low picomolar range, and a maximum stabilization of at least approximately 6.3 kcal/mol relative to complexes with undistorted, non-specific DNA. We investigated IHF binding and found that appropriate structural distortions can greatly enhance its affinity. On the basis of the coupling of structural and relevant binding data, we estimate the amount of conformational strain in an IHF-mediated DNA kink that is relieved by a nick (at least 0.76 kcal/mol) and pinpoint the location of the strain. We show that AHU has a sequence preference for an A+T-rich region in the center of its DNA-binding site, correlating with an unusually narrow minor groove. This is similar to sequence preferences shown by the eukaryotic nucleosome.

  6. Structure-based Analysis to Hu-DNA Binding

    Energy Technology Data Exchange (ETDEWEB)

    Swinger,K.; Rice, P.

    2007-01-01

    HU and IHF are prokaryotic proteins that induce very large bends in DNA. They are present in high concentrations in the bacterial nucleoid and aid in chromosomal compaction. They also function as regulatory cofactors in many processes, such as site-specific recombination and the initiation of replication and transcription. HU and IHF have become paradigms for understanding DNA bending and indirect readout of sequence. While IHF shows significant sequence specificity, HU binds preferentially to certain damaged or distorted DNAs. However, none of the structurally diverse HU substrates previously studied in vitro is identical with the distorted substrates in the recently published Anabaena HU(AHU)-DNA cocrystal structures. Here, we report binding affinities for AHU and the DNA in the cocrystal structures. The binding free energies for formation of these AHU-DNA complexes range from 10-14.5 kcal/mol, representing K{sub d} values in the nanomolar to low picomolar range, and a maximum stabilization of at least 6.3 kcal/mol relative to complexes with undistorted, non-specific DNA. We investigated IHF binding and found that appropriate structural distortions can greatly enhance its affinity. On the basis of the coupling of structural and relevant binding data, we estimate the amount of conformational strain in an IHF-mediated DNA kink that is relieved by a nick (at least 0.76 kcal/mol) and pinpoint the location of the strain. We show that AHU has a sequence preference for an A+T-rich region in the center of its DNA-binding site, correlating with an unusually narrow minor groove. This is similar to sequence preferences shown by the eukaryotic nucleosome.

  7. A molecular dynamics study on the structural and electronic properties of two-dimensional icosahedral B12 cluster based structures

    Science.gov (United States)

    Kah, Cherno Baba; Yu, M.; Jayanthi, C. S.; Wu, S. Y.

    2014-03-01

    Our previous study on one-dimensional icosahedral B12 cluster (α-B12) based chain [Bulletin of APS Annual Meeting, p265 (2013)] and ring structures has prompted us to study the two-dimensional (2D) α-B12 based structures. Recently, we have carried out a systematic molecular dynamics study on the structural stabilities and electronic properties of the 2D α-B12 based structures using the SCED-LCAO method [PRB 74, 15540 (2006)]. We have considered several types of symmetry for these 2D structures such as δ3, δ4, δ6 (flat triangular), and α' types. We have found that the optimized structures are energetically in the order of δ6 < α' < δ3 < δ4 which is different from the energy order of α'< δ6 < δ4 < δ3 found in the 2D boron monolayer sheets [ACS Nano 6, 7443 (2012)]. A detailed discussion of this study will be presented. The first author acknowledges the McSweeny Fellowship for supporting his research in this work.

  8. Guided Lamb wave based 2-D spiral phased array for structural health monitoring of thin panel structures

    Science.gov (United States)

    Yoo, Byungseok

    2011-12-01

    In almost all industries of mechanical, aerospace, and civil engineering fields, structural health monitoring (SHM) technology is essentially required for providing the reliable information of structural integrity of safety-critical structures, which can help reduce the risk of unexpected and sometimes catastrophic failures, and also offer cost-effective inspection and maintenance of the structures. State of the art SHM research on structural damage diagnosis is focused on developing global and real-time technologies to identify the existence, location, extent, and type of damage. In order to detect and monitor the structural damage in plate-like structures, SHM technology based on guided Lamb wave (GLW) interrogation is becoming more attractive due to its potential benefits such as large inspection area coverage in short time, simple inspection mechanism, and sensitivity to small damage. However, the GLW method has a few critical issues such as dispersion nature, mode conversion and separation, and multiple-mode existence. Phased array technique widely used in all aspects of civil, military, science, and medical industry fields may be employed to resolve the drawbacks of the GLW method. The GLW-based phased array approach is able to effectively examine and analyze complicated structural vibration responses in thin plate structures. Because the phased sensor array operates as a spatial filter for the GLW signals, the array signal processing method can enhance a desired signal component at a specific direction while eliminating other signal components from other directions. This dissertation presents the development, the experimental validation, and the damage detection applications of an innovative signal processing algorithm based on two-dimensional (2-D) spiral phased array in conjunction with the GLW interrogation technique. It starts with general backgrounds of SHM and the associated technology including the GLW interrogation method. Then, it is focused on the

  9. Kinematics and dynamics of deployable structures with scissor-like-elements based on screw theory

    Science.gov (United States)

    Sun, Yuantao; Wang, Sanmin; Mills, James K.; Zhi, Changjian

    2014-07-01

    Because the deployable structures are complex multi-loop structures and methods of derivation which lead to simpler kinematic and dynamic equations of motion are the subject of research effort, the kinematics and dynamics of deployable structures with scissor-like-elements are presented based on screw theory and the principle of virtual work respectively. According to the geometric characteristic of the deployable structure examined, the basic structural unit is the common scissor-like-element(SLE). First, a spatial deployable structure, comprised of three SLEs, is defined, and the constraint topology graph is obtained. The equations of motion are then derived based on screw theory and the geometric nature of scissor elements. Second, to develop the dynamics of the whole deployable structure, the local coordinates of the SLEs and the Jacobian matrices of the center of mass of the deployable structure are derived. Then, the equivalent forces are assembled and added in the equations of motion based on the principle of virtual work. Finally, dynamic behavior and unfolded process of the deployable structure are simulated. Its figures of velocity, acceleration and input torque are obtained based on the simulate results. Screw theory not only provides an efficient solution formulation and theory guidance for complex multi-closed loop deployable structures, but also extends the method to solve dynamics of deployable structures. As an efficient mathematical tool, the simper equations of motion are derived based on screw theory.

  10. TECTONIC ZONING OF THE SEDIMENTARY COVER OF THE SEA OF OKHOTSK BASED ON LITHOPHYSICAL, STRUCTURAL AND STRUCTURAL-LITHOPHYSICAL INDICATORS

    Directory of Open Access Journals (Sweden)

    V. P. Semakin

    2015-09-01

    Full Text Available In terms of tectonics, the Sea of Okhotsk (Fig.1 is the epi-Mesozoic Okhotsk plate comprising the heterogeneous basement that is mainly pre-Cenozoic (the lower structural stage and the sedimentary cover that is mainly represented by the Paleogenic-Neogenic-Quaternary deposits with the Upper Cretaceous sedimentary rocks observed locally without a visible hiatus (the upper structural stage.Results of tectonic zoning of the sedimentary cover based on  lithophysical indicators (Fig. 2 are represented in the format of maps showing lithophysical complexes (LC within the limits of four regional seismo-stratigraphic complexes/structural layers (RSSC I-IV corresponding to the following time intervals: the pre-Oligocene К2-P1-2 (RSSC I, the Oligocene – Lower Miocene P3-N11 (RSSC II, the Lower-Mid Miocene N11-2 (RSSC III, and the Upper Miocene – Pliocene N13-N2 (RSSC IV. Diverse lithological-facies associations composing the RSSCs are grouped into the following lithophysical complexes (LC: 1 - coal-bearing silty-clayey-sandy terrigenous, 2 - sandy-silty-clayey terrigenous, 3 - silty-clayey-siliceous, and 4 - sandy-silty-clayey volcanic [Sergeyev, 2006].Tectonic zoning of the sedimentary cover based on structural indicators is carried out with reference to the sediment-thickness map [Sergeyev, 2006], including a significantly revised segment showing the area of the Deryugin basin [Semakin, Kochergin, 2013]. Results of such zoning are represented in the format of a structural-tectonic map (Fig. 3 showing orientations and morphology of the structural elements of the sedimentary cover, the thickness of the sedimentary cover, and amplitudes of relative uplifts and troughs.With reference to the structural-tectonic map (see Fig 3, the structural elements of different orders are grouped by their sizes, spatial positions and orientations and thus comprise tectonic sistems (Fig. 4, structural zones (Fig. 5 that unclude relative uplifts and troughs that are

  11. Evaluation for Rationalization of the Industrial Structure Based on Grey Relevancy Degree

    Institute of Scientific and Technical Information of China (English)

    RongdaChen; TaoWang

    2004-01-01

    Rationalization of Industrial Structure is essential characteristic of economic development and key to promote sustained, stable, coordinated economic development as well. Based on Grey Relevancy Degree, the paper is to analyze industry structure in Wenzhou, China. And give the evaluation for rationalization of industrial structure.

  12. Structure-sequence based analysis for identification of conserved regions in proteins

    Science.gov (United States)

    Zemla, Adam T; Zhou, Carol E; Lam, Marisa W; Smith, Jason R; Pardes, Elizabeth

    2013-05-28

    Disclosed are computational methods, and associated hardware and software products for scoring conservation in a protein structure based on a computationally identified family or cluster of protein structures. A method of computationally identifying a family or cluster of protein structures in also disclosed herein.

  13. Bayesian Network Structure Learning Based On Rough Set and Mutual Information

    Directory of Open Access Journals (Sweden)

    Zuhong Feng

    2013-09-01

    Full Text Available Abstract In Bayesian network structure learning for incomplete data set, a common problem is too many attributes causing low efficiency and high computation complexity. In this paper, an algorithm of attribute reduction based on rough set is introduced. The algorithm can effectively reduce the dimension of attributes and quickly determine the network structure using mutual information for Bayesian network structure learning.

  14. Vibration based structural health monitoring in fibre reinforced composites employing the modal strain energy method

    NARCIS (Netherlands)

    Loendersloot, Richard; Ooijevaar, Ted; Warnet, Laurent; Akkerman, Remko; Boer, de André; Meguid, S.A.; Gomes, J.F.S.

    2009-01-01

    The feasibility of a vibration based damage identification method is investigated. The Modal Strain Energy method is applied to a T–beam structure. The dynamic response of an intact structure and a damaged, delaminated structure is analysed employing a commercially available Finite Element package.

  15. Broadband terahertz metamaterial absorber based on sectional asymmetric structures

    Science.gov (United States)

    Gong, Cheng; Zhan, Mingzhou; Yang, Jing; Wang, Zhigang; Liu, Haitao; Zhao, Yuejin; Liu, Weiwei

    2016-01-01

    We suggest and demonstrate the concept and design of sectional asymmetric structures which can manipulate the metamaterial absorber’s working bandwidth with maintaining the other inherent advantages. As an example, a broadband terahertz perfect absorber is designed to confirm its effectiveness. The absorber’s each cell integrates four sectional asymmetric rings, and the entire structure composed of Au and Si3N4 is only 1.9 μm thick. The simulation results show the bandwidth with absorptivity being larger than 90% is extended by about 2.8 times comparing with the conventional square ring absorber. The composable small cell, ultra-thin, and broadband absorption with polarization and incident angle insensitivity will make the absorber suitable for the applications of focal plane array terahertz imaging. PMID:27571941

  16. Non-orthodox combinatorial models based on discordant structures

    CERN Document Server

    Romanov, V F

    2010-01-01

    This paper introduces a novel method for compact representation of sets of n-dimensional binary sequences in a form of compact triplets structures (CTS), supposing both logic and arithmetic interpretations of data. Suitable illustration of CTS application is the unique graph-combinatorial model for the classic intractable 3-Satisfiability problem and a polynomial algorithm for the model synthesis. The method used for Boolean formulas analysis and classification by means of the model is defined as a bijective mapping principle for sets of components of discordant structures to a basic set. The statistic computer-aided experiment showed efficiency of the algorithm in a large scale of problem dimension parameters, including those that make enumeration procedures of no use. The formulated principle expands resources of constructive approach to investigation of intractable problems.

  17. Risk-based Optimization and Reliability Levels of Coastal Structures

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Burcharth, Hans F.

    2005-01-01

     Identification of optimum reliability levels for coastal structures is considered. A class of breakwaters is considered where no human injuries can be expected in cases of failure. The optimum reliability level is identified by minimizing the total costs over the service life of the structure......, including building costs, maintenance and repair costs, downtime costs and decommission costs. Different formulations are considered. Stochastic models are presented for the main failure modes for rubble mound breakwaters without superstructures, typically used for outer protection of basins. The influence...... on the minimumcost reliability levels is investigated for different values of the real rate of interest, the service lifetime, the downtime costs due to malfunction and the decommission costs....

  18. Risk-based Optimization and Reliability Levels of Coastal Structures

    DEFF Research Database (Denmark)

    Sørensen, John Dalsgaard; Burcharth, H. F.

    Identification of optimum reliability levels for coastal structures is considered. A class of breakwaters is considered where no human injuries can be expected in cases of failure. The optimum reliability level is identified by minimizing the total costs over the service life of the structure......, including building costs, maintenance and repair costs, downtime costs and decommission costs. Different formulations are considered. Stochastic models are presented for the main failure modes for rubble mound breakwaters without superstructures, typically used for outer protection of basins. The influence...... on the minimumcost reliability levels is investigated for different values of the real rate of interest, the service lifetime, the downtime costs due to malfunction and the decommission costs....

  19. Structure-based prediction of protein-folding transition paths

    CERN Document Server

    Jacobs, William M

    2016-01-01

    We propose a general theory to describe the distribution of protein-folding transition paths. We show that transition paths follow a predictable sequence of high-free-energy transient states that are separated by free-energy barriers. Each transient state corresponds to the assembly of one or more discrete, cooperative units, which are determined directly from the native structure. We show that the transition state on a folding pathway is reached when a small number of critical contacts are formed between a specific set of substructures, after which folding proceeds downhill in free energy. This approach suggests a natural resolution for distinguishing parallel folding pathways and provides a simple means to predict the rate-limiting step in a folding reaction. Our theory identifies a common folding mechanism for proteins with diverse native structures and establishes general principles for the self-assembly of polymers with specific interactions.

  20. A chaos-based image encryption algorithm using alternate structure

    Institute of Scientific and Technical Information of China (English)

    ZHANG YiWei; WANG YuMin; SHEN XuBang

    2007-01-01

    Combined with two chaotic maps, a novel alternate structure is applied to image cryptosystem. In proposed algorithm, a general cat-map is used for permutation and diffusion, as well as the OCML (one-way coupled map lattice), which is applied for substitution. These two methods are operated alternately in every round of encryption process, where two subkeys employed in different chaotic maps are generated through the masterkey spreading. Decryption has the same structure with the encryption algorithm, but the masterkey in each round should be reversely ordered in decryption. The cryptanalysis shows that the proposed algorithm bears good immunities to many forms of attacks. Moreover, the algorithm features high execution speed and compact program, which is suitable for various software and hardware applications.

  1. Laser induced structural transformation in chalcogenide based superlattices

    Science.gov (United States)

    Zallo, Eugenio; Wang, Ruining; Bragaglia, Valeria; Calarco, Raffaella

    2016-05-01

    Superlattices made of alternating layers of nominal GeTe and Sb2Te3 have been studied by micro-Raman spectroscopy. A structural irreversible transformation into ordered GeSbTe alloy is induced by high power laser light exposure. The intensity ratio of anti-Stokes and Stokes scattering under laser illumination gives a maximum average temperature in the sample of 177 °C. The latter is lower than the growth temperature and of 400 °C necessary by annealing to transform the structure in a GeSbTe alloy. The absence of this configuration after in situ annealing even up to 300 °C evidences an electronic excitation induced-transition which brings the system into a different and stable crystalline state.

  2. Design and Analysis of Fuzzy Metagraph Based Data Structures

    Directory of Open Access Journals (Sweden)

    A.Thirunavukarasu

    2012-11-01

    Full Text Available Fuzzy metagraph is an emerging technique used in the design of many information processing systems like transaction processing systems, decision support systems, and workflow systems. Very often, evena carefully chosen graph data structure could be improvised to provide more efficiency in terms of time complexity or space complexity or both. In this paper, a well-designed fuzzy metagraph is proposed and distinct matrices have been developed to reduce the time-complexity. Fuzzy Expert System (FES integrated with theFuzzy Metagraph can yield excellent state-of-the-art decisions under complex circumstances which other graph structures find it very difficult. Thus a user with this effective decision making system can make effective and quick decisions to solve the problem.

  3. MOEA-Based Fuzzy Control for Seismically Excited Structures

    Science.gov (United States)

    Ning, Xiang-Liang; Tan, Ping; Zhou, Fu-Lin

    To guarantee the safety and functionality of structures simultaneously at different levels of seismic loadings, this paper proposes a multi-objective switching fuzzy control (MOSFC) strategy. MOSFC functions as a trigger with two control states considered. When the structure is at the state of linear, the main objection of control is the peak acceleration. On the other hand, once the nonlinear appears, the control of peak inter-storey drift is the main objection. Multi-objective genetic algorithm, NSGA-II, is employed for optimizing the fuzzy control rules. A scaled model of a six-storey building with two MR dampers installed at the two bottom floors is simulated here. Linear and Nonlinear numerical simulations demonstrate the effectiveness and robustness.

  4. Analysis of regular structures third degree based on chordal rings

    DEFF Research Database (Denmark)

    Bujnowski, Slawomir; Dubalski, Bozydar; Pedersen, Jens Myrup

    2009-01-01

      This paper presents an analysis of modified chordal rings third degree (CR3m) and modified double ring structure (N2Rm), which can be used as models of real networks. The proposed solutions are novel and different from the ones currently used since they have two chords of different lengths....... In the first part of paper, formulas for the basic parameters diameter and average path length were derived using optimal/ideal graphs, and used for indicating transmission properties of the structures. These analytical results were confirmed by comparison to a large number of computations on real graphs.  In...... the second part, these parameters were compared to the parameters of standard topologies, showing that the distances are shorter when having two different chord lengths....

  5. Virtual Lead Identification of Farnesyltransferase Inhibitors Based on Ligand and Structure-Based Pharmacophore Techniques

    Directory of Open Access Journals (Sweden)

    Nizar M. Mhaidat

    2013-05-01

    Full Text Available Farnesyltransferase enzyme (FTase is considered an essential enzyme in the Ras signaling pathway associated with cancer. Thus, designing inhibitors for this enzyme might lead to the discovery of compounds with effective anticancer activity. In an attempt to obtain effective FTase inhibitors, pharmacophore hypotheses were generated using structure-based and ligand-based approaches built in Discovery Studio v3.1. Knowing the presence of the zinc feature is essential for inhibitor’s binding to the active site of FTase enzyme; further customization was applied to include this feature in the generated pharmacophore hypotheses. These pharmacophore hypotheses were thoroughly validated using various procedures such as ROC analysis and ligand pharmacophore mapping. The validated pharmacophore hypotheses were used to screen 3D databases to identify possible hits. Those which were both high ranked and showed sufficient ability to bind the zinc feature in active site, were further refined by applying drug-like criteria such as Lipiniski’s “rule of five” and ADMET filters. Finally, the two candidate compounds (ZINC39323901 and ZINC01034774 were allowed to dock using CDOCKER and GOLD in the active site of FTase enzyme to optimize hit selection.

  6. DNA-Based Photonic Bandgap Structures and Devices

    Science.gov (United States)

    2009-11-29

    Genes to Machines: DNA Nanomechanical Devices, Trends in Biochemical Sciences 30, 119-125 (2005). 4. N.C. Seeman. Structural DNA Nanotechnology: An... kpc ≥ ω , k becomes purely real.. If the dispersion relation just given is written as =++ 22)( kpkak 1ε 2)( c ω , it resembles that for modes in a...waveguide. By analogy, the frequency region for which 1ε 22)( kpc < ω will be referred to as cutoff. IV. APPLICATIONS The presence of molecules

  7. Structuring Task-based Interaction through Collaborative Learning Techniques (2)

    Institute of Scientific and Technical Information of China (English)

    William Littlewood

    2004-01-01

    @@ Techniques for collaborative learning In this section the focus will move from broad strategies to specific techniques (often also called "structures") through which the strategies can be realized. It gives a selection of techniques which have proved (in my own experience as well as that of others) particularly useful in pro-viding contexts for practice, exploration and /or interaction in the second language classroom.

  8. Dispersion Based Photonic-Crystal Structures for RF Applications

    Science.gov (United States)

    2006-06-01

    dimensional FDTD simulation. In our experiment, we fabricated the device using a computer numerically controlled ( CNC ) router . A tapered planar structure is...millimeter-wave photonic crystals are fabricated in Rexolite slabs by a computer numerically controlled ( CNC ) micro-milling system. Using the millimeter...loss, and low cost. In particular, it can be fabricated using a CNC micro-milling machine. Also, its low index provides a weaker confinement in the

  9. Concept Vector for Similarity Measurement Based on Hierarchical Domain Structure

    OpenAIRE

    Hong Zhe Liu; Hong Bao; Xu

    2012-01-01

    The concept vector model generalizes standard representations of similarity concept in terms of tree-like structure. In the model, each concept node in the hierarchical tree has ancestor and descendent concept nodes composing its relevancy nodes, thus a concept node is represented as a concept vector according to its relevancy nodes' density and the similarity of the two concepts is obtained by computing cosine similarity between their vectors. In addition, the model is adjusted in terms of l...

  10. Micromechanism Based Modeling of Structural Life in Metal Matrix Composites

    Science.gov (United States)

    2007-11-02

    subsequent radial cracking. The work performed under this grant also included a program to experimentally characterize the morphology of Ti02 , one of...experimentally characterize the morphology of Ti02 , one of the primary stoichiometric oxides formed during oxidation of titanium, in order to develop more...accurate oxide layer growth models. An part of dm iffuu, Lhi growtn ana structure uf(thj— Ti02 mrirlr Inyrr, mnnnlilliii, rinmpli i i dlM! lllllilj

  11. A Lexically Based Proposal of Argument Structure Meaning

    Institute of Scientific and Technical Information of China (English)

    Adele E. Goldberg; Devin Casenhiser; Nitya Sethuraman

    2005-01-01

    @@ 1. Introduction Children conservatively produce syntactic patterns on a verb-by-verb basis (Akhtar and Tomasello, 1997;Baker, 1979; Bates and MacWhinney, 1987; Bowerman, 1982; Braine, 1976; Brooks and Tomasello, 1999;Gropen et al., 1989; Ingram and Thompson, 1996; Lieven et al., 1997; MacWhinney, 1982; Olguin and Tomasello, 1993; Schlesinger, 1982; Tomasello, 1992). Ultimately, however, generalizations over specific verbs are made, forming speakers' knowledge of argument structure patterns (Akhtar, 1999; Bowerman,1982; Brooks and Tomasello, 1999).

  12. Paired structures and other opposite-based models

    DEFF Research Database (Denmark)

    Rodríguez, J. Tinguaro; Franco, Camilo; Gómez, Daniel;

    2015-01-01

    In this paper we present a new class of fuzzy sets, paired fuzzy sets, that tries to overcome any conflict between families of fuzzy sets that share a main characteristic: that they are generated from two basic opposite fuzzy sets. Hence, the first issue is to formalize the notion of opposition, ...... as a particular paired structure when the classical fuzzy negation is considered; on the other hand, the relationship of this model with bipolarity is reconsidered from our paired view....

  13. Design and Analysis of Fuzzy Metagraph Based Data Structures

    OpenAIRE

    A.Thirunavukarasu; Dr. S. Uma Maheswari

    2012-01-01

    Fuzzy metagraph is an emerging technique used in the design of many information processing systems like transaction processing systems, decision support systems, and workflow systems. Very often, evena carefully chosen graph data structure could be improvised to provide more efficiency in terms of time complexity or space complexity or both. In this paper, a well-designed fuzzy metagraph is proposed and distinct matrices have been developed to reduce the time-complexity. Fuzzy Expert System (...

  14. Energy Efficiency of Laser Driven, Structure Based Accelerators

    Energy Technology Data Exchange (ETDEWEB)

    Siemann, R

    2004-04-21

    The acceleration efficiency of a laser driven linear accelerator is analyzed. The laser power, loss factor and impedances determine the maximum charge that can be accelerated and the efficiency of that acceleration. The accelerator structure can be incorporated into a laser cavity. The equation for the resultant laser pulse is derived and analyzed. A specific example is presented, and the steady-state laser pulse shapes, acceleration efficiency, and average unloaded gradient are calculated.

  15. Matroidal Structure of Generalized Rough Sets Based on Tolerance Relations

    Directory of Open Access Journals (Sweden)

    Hui Li

    2014-01-01

    of the generalized rough set based on the tolerance relation. The matroid can also induce a new relation. We investigate the connection between the original tolerance relation and the induced relation.

  16. Structure and property of Cu-based thermosensitive nanocomposite

    Institute of Scientific and Technical Information of China (English)

    LOU Bai-yang; XU Bin; MA Xiao-chun; LI Le-guo

    2006-01-01

    The Cu-based thermosensitive nanocomposites are made by high energy ball milling. The microstructures and properties of Cu-based thermosensitive nanocomposites are studied by transmission electron microscopy(TEM) and themosensitivity test. The effects of milling time on the microstructures and the thermosensitivity of Cu-based nanocomposite material are researched. The results show that the Cu-based nanocomposite can be made by high energy ball milling. As the milling time increases, the copper particle size decreases in the nanocomposite, then the thermoexpansivity of nanocomposite increases. The nanocomposite is of best thermoexpansivity when the milling time is up to 100 h. At 35-45 ℃, the nanocomposite shows good thermosensitivity.

  17. Structure-based view on [PSI(+)] prion properties.

    Science.gov (United States)

    Bondarev, Stanislav A; Zhouravleva, Galina A; Belousov, Mikhail V; Kajava, Andrey V

    2015-01-01

    Yeast [PSI(+)] prion is one of the most suitable and well characterized system for the investigation of the prion phenomenon. However, until recently, the lack of data on the 3D arrangement of Sup35p prion fibrils hindered progress in this area. The recent arrival in this field of new experimental techniques led to the parallel and in-register superpleated β-structure as a consensus model for Sup35p fibrils. Here, we analyzed the effect of amino acid substitutions of the Sup35 protein through the prism of this structural model. Application of a newly developed computational approach, called ArchCandy, gives us a better understanding of the effect caused by mutations on the fibril forming potential of Sup35 protein. This bioinformatics tool can be used for the design of new mutations with desired modification of prion properties. Thus, we provide examples of how today, having progress toward elucidation of the structural arrangement of Sup35p fibrils, researchers can advance more efficiently to a better understanding of prion [PSI(+)] stability and propagation.

  18. Novel Synthesis of Ferrocenyl Schiff Bases and Crystal Structure

    Institute of Scientific and Technical Information of China (English)

    ZHANG,Hui-Qing; ZHOU,Zhi-Ming; YU,Cong-Xuan

    2004-01-01

    @@ Ferrocenylimines have attracted additional interest due to their versatile utilities. They have been widely used as plant growth regulator, bactericide, fuel dope and new anticarcinogen.[1] And a large amount of ferrocenyl shiff bases were prepared in the past. However, study on ferrocenylimines as directing ortho metalation group (DMG) in the (-)-sparteine meditated synthesis of planar chiral ferrocene has not been reported. Herein, we synthesized a series of ferrocenyl schiff bases for this study.

  19. Syntheses and Structural Studies of Schiff Bases Involving Hydrogen Bonds

    OpenAIRE

    José Elguero; Rosa M. Claramunt; Dionisia Sanz; Almudena Perona

    2006-01-01

    New Schiff bases have been prepared by reacting 3-hydroxy-4-pyridine- carboxaldehyde with various amines. NMR spectroscopic methods provided clear evidence that the Schiff bases exist in the solid state and in solution as hydroxyimino tautomers with the E-configuration. A study of the stabilities of the tautomeric forms and the different conformers has been carried out using density functional calculations at the B3LYP/6-31G** level. © 2006 by MDPI.

  20. Nanowire-based polypyrrole hierarchical structures synthesized by a two-step electrochemical method.

    Science.gov (United States)

    Ge, Dongtao; Huang, Sanqing; Qi, Rucai; Mu, Jing; Shen, Yuqing; Shi, Wei

    2009-08-03

    A simple two-step electrochemical method is proposed for the synthesis of nanowire-based polypyrrole hierarchical structures. In the first step, microstructured polypyrrole films are prepared by electropolymerization. Then, polypyrrole nanowires are electrodeposited on the surface of the as-synthesized microstructured polypyrrole films. As a result, hierarchical structures of polypyrrole nanowires on polypyrrole microstructures are obtained. The surface wettabilities of the resulting nanowire-based polypyrrole hierarchical structures are examined. It is expected that this two-step method can be developed into a versatile route to produce nanowire-based polypyrrole hierarchical structures with different morphologies and surface properties.

  1. Towards Domain Ontology Creation Based on a Taxonomy Structure in Computer Vision

    Directory of Open Access Journals (Sweden)

    Sadgal mohamed

    2016-02-01

    Full Text Available In computer vision to create a knowledge base usable by information systems, we need a data structure facilitating the information access. Artificial intelligence community uses the ontologies to structure and represent the domain knowledge. This information structure can be used as a database of many geographic information systems (GIS or information systems treating real objects for example road scenes, besides it can be utilized by other systems. For this, we provide a process to create a taxonomy structure based on new hierarchical image clustering method. The hierarchical relation is based on visual object features and contributes to build domain ontology.

  2. International Workshop on Advanced Dynamics and Model Based Control of Structures and Machines

    CERN Document Server

    Belyaev, Alexander; Krommer, Michael

    2017-01-01

    The papers in this volume present and discuss the frontiers in the mechanics of controlled machines and structures. They are based on papers presented at the International Workshop on Advanced Dynamics and Model Based Control of Structures and Machines held in Vienna in September 2015. The workshop continues a series of international workshops held in Linz (2008) and St. Petersburg (2010).

  3. Scenario based approach to structural damage detection and its value in a risk and reliability perspective

    DEFF Research Database (Denmark)

    Hovgaard, Mads Knude; Hansen, Jannick Balleby; Brincker, Rune

    2013-01-01

    A scenario- and vibration based structural damage detection method is demonstrated though simulation. The method is Finite Element (FE) based. The value of the monitoring is calculated using structural reliability theory. A high cycle fatigue crack propagation model is assumed as the damage mecha...

  4. Subspace-Based Algorithms for Structural Identification, Damage Detection, and Sensor Data Fusion

    Directory of Open Access Journals (Sweden)

    Goursat Maurice

    2007-01-01

    Full Text Available This paper reports on the theory and practice of covariance-driven output-only and input/output subspace-based identification and detection algorithms. The motivating and investigated application domain is vibration-based structural analysis and health monitoring of mechanical, civil, and aeronautic structures.

  5. DIRECT GEOREFERENCING OF UAV DATA BASED ON SIMPLE BUILDING STRUCTURES

    Directory of Open Access Journals (Sweden)

    W. Tampubolon

    2016-06-01

    Full Text Available Unmanned Aerial Vehicle (UAV data acquisition is more flexible compared with the more complex traditional airborne data acquisition. This advantage puts UAV platforms in a position as an alternative acquisition method in many applications including Large Scale Topographical Mapping (LSTM. LSTM, i.e. larger or equal than 1:10.000 map scale, is one of a number of prominent priority tasks to be solved in an accelerated way especially in third world developing countries such as Indonesia. As one component of fundamental geospatial data sets, large scale topographical maps are mandatory in order to enable detailed spatial planning. However, the accuracy of the products derived from the UAV data are normally not sufficient for LSTM as it needs robust georeferencing, which requires additional costly efforts such as the incorporation of sophisticated GPS Inertial Navigation System (INS or Inertial Measurement Unit (IMU on the platform and/or Ground Control Point (GCP data on the ground. To reduce the costs and the weight on the UAV alternative solutions have to be found. This paper outlines a direct georeferencing method of UAV data by providing image orientation parameters derived from simple building structures and presents results of an investigation on the achievable results in a LSTM application. In this case, the image orientation determination has been performed through sequential images without any input from INS/IMU equipment. The simple building structures play a significant role in such a way that geometrical characteristics have been considered. Some instances are the orthogonality of the building’s wall/rooftop and the local knowledge of the building orientation in the field. In addition, we want to include the Structure from Motion (SfM approach in order to reduce the number of required GCPs especially for the absolute orientation purpose. The SfM technique applied to the UAV data and simple building structures additionally presents an

  6. Direct Georeferencing of Uav Data Based on Simple Building Structures

    Science.gov (United States)

    Tampubolon, W.; Reinhardt, W.

    2016-06-01

    Unmanned Aerial Vehicle (UAV) data acquisition is more flexible compared with the more complex traditional airborne data acquisition. This advantage puts UAV platforms in a position as an alternative acquisition method in many applications including Large Scale Topographical Mapping (LSTM). LSTM, i.e. larger or equal than 1:10.000 map scale, is one of a number of prominent priority tasks to be solved in an accelerated way especially in third world developing countries such as Indonesia. As one component of fundamental geospatial data sets, large scale topographical maps are mandatory in order to enable detailed spatial planning. However, the accuracy of the products derived from the UAV data are normally not sufficient for LSTM as it needs robust georeferencing, which requires additional costly efforts such as the incorporation of sophisticated GPS Inertial Navigation System (INS) or Inertial Measurement Unit (IMU) on the platform and/or Ground Control Point (GCP) data on the ground. To reduce the costs and the weight on the UAV alternative solutions have to be found. This paper outlines a direct georeferencing method of UAV data by providing image orientation parameters derived from simple building structures and presents results of an investigation on the achievable results in a LSTM application. In this case, the image orientation determination has been performed through sequential images without any input from INS/IMU equipment. The simple building structures play a significant role in such a way that geometrical characteristics have been considered. Some instances are the orthogonality of the building's wall/rooftop and the local knowledge of the building orientation in the field. In addition, we want to include the Structure from Motion (SfM) approach in order to reduce the number of required GCPs especially for the absolute orientation purpose. The SfM technique applied to the UAV data and simple building structures additionally presents an effective tool

  7. Crack nucleation near stress concentrators in quasi-brittle materials

    Science.gov (United States)

    Demeshkin, A. G.; Kornev, V. M.; Kurguzov, V. D.

    2012-02-01

    The results of combined tension (compression) and shear experiments with plexiglass specimens are used to construct a Coulomb-Mohr-type strength curve. Fracture experiments were performed with plexiglass square plates with internal through cuts. The specimens were subjected to compression on a Zwick/Roell testing machine until cracks appeared. In the process of testing, nucleation of symmetric cracks was observed, which propagated as the load was further increased. The fracture character (tensile or shear) could not be decided until a subsequent numerical analysis of the plate stress-strain state was performed by the finite elementmethod. The stress concentration loci were found to coincide with the crack nucleation loci. In the plane ( σ, τ ), Mohr's circles were constructed for the stress states at the stress concentration points. If the point at which Mohr's curve touches the limit curve is known, then one can determine the plane on which the normal and tangential stresses attain critical values, and hence one can determine the crack propagation direction. The experimental results and numerical solutions were found to be in good agreement.

  8. Standardized Procedure Content And Data Structure Based On Human Factors Requirements For Computer-Based Procedures

    Energy Technology Data Exchange (ETDEWEB)

    Bly, Aaron; Oxstrand, Johanna; Le Blanc, Katya L

    2015-02-01

    Most activities that involve human interaction with systems in a nuclear power plant are guided by procedures. Traditionally, the use of procedures has been a paper-based process that supports safe operation of the nuclear power industry. However, the nuclear industry is constantly trying to find ways to decrease the human error rate, especially the human errors associated with procedure use. Advances in digital technology make computer-based procedures (CBPs) a valid option that provides further enhancement of safety by improving human performance related to procedure use. The transition from paper-based procedures (PBPs) to CBPs creates a need for a computer-based procedure system (CBPS). A CBPS needs to have the ability to perform logical operations in order to adjust to the inputs received from either users or real time data from plant status databases. Without the ability for logical operations the procedure is just an electronic copy of the paper-based procedure. In order to provide the CBPS with the information it needs to display the procedure steps to the user, special care is needed in the format used to deliver all data and instructions to create the steps. The procedure should be broken down into basic elements and formatted in a standard method for the CBPS. One way to build the underlying data architecture is to use an Extensible Markup Language (XML) schema, which utilizes basic elements to build each step in the smart procedure. The attributes of each step will determine the type of functionality that the system will generate for that step. The CBPS will provide the context for the step to deliver referential information, request a decision, or accept input from the user. The XML schema needs to provide all data necessary for the system to accurately perform each step without the need for the procedure writer to reprogram the CBPS. The research team at the Idaho National Laboratory has developed a prototype CBPS for field workers as well as the

  9. Pose Self-Measurement of Noncooperative Spacecraft Based on Solar Panel Triangle Structure

    OpenAIRE

    Jingzhou Song; Caixiu Cao

    2015-01-01

    Aiming at the recognition and location of noncooperative spacecraft, this paper presents a monocular vision pose measurement method based on solar triangle structure. First of all, an autonomous recognition algorithm of feature structure based on sliding window Hough transformation (SWHT) and inscribed circle of a triangle is proposed, and the image coordinates of feature points on the triangle can be obtained relying on this algorithm, combined with the P4P algorithm and the structure of spa...

  10. Seismic Responses of Asymmetric Base-Isolated Structures under Near-Fault Ground Motion

    Institute of Scientific and Technical Information of China (English)

    YE Kun; LI Li; FANG Qin-han

    2008-01-01

    An inter-story shear model of asymmetric base-isolated structures incorporating deformation of each isolation bearing was built, and a method to simultaneously simulate bi-directional near-fault and far-field ground motions was proposed. A comparative study on the dynamic responses of asymmetric base-isolated structures under near-fault and far-field ground motions were conducted to investigate the effects of eccentricity in the isolation system and in the superstructures, the ratio of the uncoupled torsional to lateral frequency of the superstructure and the pulse period of near-fault ground motions on the nonlinear seismic response of asymmetric base-isolated structures. Numerical results show that eccentricity in the isolation system makes asymmetric base-isolated structure more sensitive to near-fault ground motions, and the pulse period of near-fault ground motions plays an import role in governing the seismic responses of asymmetric base-isolated structures.

  11. Study Competition Channel Structure Based on the Differences of Cost and Products

    Institute of Scientific and Technical Information of China (English)

    ZHOU Lan; AI Xingzheng; ZHANG Chi

    2004-01-01

    The purpose of this paper is to expand Trivedig study on the influence of channel structure ,which based on product difference,to cost difference;and analyze the evolution course of channel structure under different conditions.We find that like product difference,cost difference have important influence on the choice of channel structure.This paper has improved the present result and provided proof for the choice of channel structure under different environments.

  12. Reference Sphere Positioning Measurement Based on Line-Structured Light Vision Sensor

    OpenAIRE

    2013-01-01

    The line-structured light vision sensor has been used widely in industrial vision measuring fields due to its simple structure, small volume, light weight, low cost, convenient calibration, and high accuracy of measurement. To locate the reference sphere precisely with line-structured light vision sensor, a mathematical model based on the measuring principle of line-structured light vision sensor is established in the paper. Then, the positioning measurement error is analyzed in detail. The e...

  13. Structure and Properties of Polysaccharide Based BioPolymer Gels

    Science.gov (United States)

    Prud'Homme, Robert K.

    2000-03-01

    Nature uses the pyranose ring as the basic building unit for a wideclass of biopolymers. Because of their biological origin these biopolymers naturally find application as food additives, rheology modifiers. These polymers range from being rigid skeletal material, such as cellulose that resist dissolution in water, to water soluble polymers, such as guar or carrageenan. The flexibility of the basic pyranose ring structure to provide materials with such a wide range of properties comes from the specific interactions that can be engineered by nature into the structure. We will present several examples of specific interactions for these systems: hydrogen bonding, hydrophobic interactions, and specific ion interactions. The relationship between molecular interations and rheology will be emphasized. Hydrogen bonding mediated by steric interference is used to control of solubility of starch and the rheology of guar gels. A more interesting example is the hydrogen bonding induced by chemical modification in konjac glucomannan that results in a gel that melts upon cooling. Hydrogen bonding interactions in xanthan lead to gel formation at very low polymer concentrations which is a result of the fine tuning of the polymer persistence length and total contour length. Given the function of xanthan in nature its molecular architecture has been optimized. Hydrophobic interactions in methylcellulose show a reverse temperature dependence arising from solution entropy. Carrageenan gelation upon the addition of specific cations will be addressed to show the interplay of polymer secondary structure on chemical reactivity. And finally the cis-hydroxyls on galactomannans permit crosslinking by a variety of metal ions some of which lead to "living gels" and some of which lead to permanently crosslinked networks.

  14. Structure Properties of Koch Networks Based on Networks Dynamical Systems

    CERN Document Server

    Zhai, Yinhu; Wang, Shaohui

    2016-01-01

    We introduce an informative labeling algorithm for the vertices of a family of Koch networks. Each of the labels is consisted of two parts, the precise position and the time adding to Koch networks. The shortest path routing between any two vertices is determined only on the basis of their labels, and the routing is calculated only by few computations. The rigorous solutions of betweenness centrality for every node and edge are also derived by the help of their labels. Furthermore, the community structure in Koch networks is studied by the current and voltage characteristics of its resistor networks.

  15. Attraction-Based Computation of Hyperbolic Lagrangian Coherent Structures

    CERN Document Server

    Karrasch, Daniel; Haller, George

    2014-01-01

    Recent advances enable the simultaneous computation of both attracting and repelling families of Lagrangian Coherent Structures (LCS) at the same initial or final time of interest. Obtaining LCS positions at intermediate times, however, has been problematic, because either the repelling or the attracting family is unstable with respect to numerical advection in a given time direction. Here we develop a new approach to compute arbitrary positions of hyperbolic LCS in a numerically robust fashion. Our approach only involves the advection of attracting material surfaces, thereby providing accurate LCS tracking at low computational cost. We illustrate the advantages of this approach on a simple model and on a turbulent velocity data set.

  16. Optoelectronic devices based on graded bandgap structures utilising electroplated semiconductors

    OpenAIRE

    2016-01-01

    The main aim of the work presented in this thesis is to develop low-cost multi-junction graded bandgap solar cells using electroplated semiconductors. The semiconductor materials explored in this research are CdSe, ZnTe, CdS, CdMnTe and CdTe thin films. These layers were characterised for their structural, compositional, morphological, optical, and electrical features using XRD, Raman spectroscopy, EDX, SEM, UV-Vis spectroscopy, PEC cell, C-V, I-V and UPS measurement techniques respectively. ...

  17. ASSESSMENT OF CHAROLAIS BULLS POPULATION STRUCTURE BASED ON SNPs ANALYSES

    OpenAIRE

    Nina Moravčíková; Tomáš Minarovič; Anna Trakovická

    2014-01-01

    The aim of this study was identification of SNPs in leptin (LEP), leptin receptor (LEPR), growth hormone (GH) and specific pituitary transcription factor (Pit-1) genes in order to analyze genetic structure of Charolais bulls’ population. The total numbers of genomic DNA samples were taken from 52 breeding bulls and analyzed by PCR-RFLP method. After digestion with restriction enzymes were detected in bulls’ population alleles with frequency: LEP/Sau3AI A 0.83 and B 0.17 (±0.037); LEPR/BseGI C...

  18. Term Structure of Interest Rates Based on Artificial Neural Network

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    In light of the nonlinear approaching capability of artificial neural networks ( ANN), the term structure of interest rates is predicted using The generalized regression neural network (GRNN) and back propagation (BP) neural networks models. The prediction performance is measured with US interest rate data. Then, RBF and BP models are compared with Vasicek's model and Cox-Ingersoll-Ross (CIR) model. The comparison reveals that neural network models outperform Vasicek's model and CIR model,which are more precise and closer to the real market situation.

  19. Investigation of structural responses of breakwaters for green water based on fluid-structure interaction analysis

    Directory of Open Access Journals (Sweden)

    Chi-Seung Lee

    2012-06-01

    Full Text Available In the present study, the structural response of breakwaters installed on container carriers against green water impact loads was numerically investigated on the basis of the fluid-structure interaction analysis. A series of numerical studies is carried out to induce breakwater collapse under such conditions, whereby a widely accepted fluid-structure interaction analysis technique is adopted to realistically consider the phenomenon of green water impact loads. In addition, the structural behaviour of these breakwaters under green water impact loads is investigated simultaneously throughout the transient analysis. A verification study of the numerical results is performed using data from actual collapse incidents of breakwaters on container carriers. On the basis of the results of a series of numerical analyses, the pressure distribution of green water was accurately predicted with respect to wave mass and velocity. It is expected that the proposed analytical methodology and predicted pressure distribution could be used as a practical guideline for the design of breakwaters on container carriers.

  20. Strengthening Structured Abstracts for Education Research: The Need for Claim-Based Structured Abstracts

    Science.gov (United States)

    Kelly, Anthony E.; Yin, Robert K.

    2007-01-01

    Recent policy recommendations involving the putative primacy of randomized clinical trials in educational settings have reignited research paradigm debates. The authors of this article use the vehicle of strengthening structured journal abstracts to point out the argumentative character of all education research claims. They offer suggestions to…