WorldWideScience

Sample records for quantitative multispectral biosensing

  1. On multi-spectral quantitative photoacoustic tomography in diffusive regime

    International Nuclear Information System (INIS)

    Bal, Guillaume; Ren, Kui

    2012-01-01

    The objective of quantitative photoacoustic tomography (qPAT) is to reconstruct the diffusion, absorption and Grüneisen thermodynamic coefficients of heterogeneous media from knowledge of the interior absorbed radiation. It has been shown in Bal and Ren (2011 Inverse Problems 27 075003), based on diffusion theory, that with data acquired at one given wavelength, all three coefficients cannot be reconstructed uniquely. In this work, we study the multi-spectral qPAT problem and show that when multiple wavelength data are available, all coefficients can be reconstructed simultaneously under minor prior assumptions. Moreover, the reconstructions are shown to be very stable. We present some numerical simulations that support the theoretical results. (paper)

  2. Determination of γ-rays emitting radionuclides in surface water: application of a quantitative biosensing method

    International Nuclear Information System (INIS)

    Wolterbeek, H. Th.; Van der Meer, A. J. G. M.

    1995-01-01

    A quantitative biosensing method has been developed for the determination of γ-rays emitting radionuclides in surface water. The method is based on the concept that at equilibrium the specific radioactivity in the biosensor is equal to the specific radioactivity in water. The method consists of the measurement of both the radionuclide and the related stable isotope (element) in the biosensor and the determination of the element in water. This three-way analysis eliminates problems such as unpredictable biosensor behaviour, effects of water elemental composition or further abiotic parameters on accumulation levels: what remains is the generally high enrichment (bioaccumulation factor BCF) of elements and radionuclides in the biosensor material. Using water plants, the method is shown to be three to five orders of magnitude more sensitive than the direct analysis of water. (author)

  3. Determination of {gamma}-rays emitting radionuclides in surface water: application of a quantitative biosensing method

    Energy Technology Data Exchange (ETDEWEB)

    Wolterbeek, H Th; Van der Meer, A. J. G. M. [Delft University of Technology, Interfaculty Reactor Institute, Mekelweg 15, 2629 JB Delft (Netherlands)

    1995-12-01

    A quantitative biosensing method has been developed for the determination of {gamma}-rays emitting radionuclides in surface water. The method is based on the concept that at equilibrium the specific radioactivity in the biosensor is equal to the specific radioactivity in water. The method consists of the measurement of both the radionuclide and the related stable isotope (element) in the biosensor and the determination of the element in water. This three-way analysis eliminates problems such as unpredictable biosensor behaviour, effects of water elemental composition or further abiotic parameters on accumulation levels: what remains is the generally high enrichment (bioaccumulation factor BCF) of elements and radionuclides in the biosensor material. Using water plants, the method is shown to be three to five orders of magnitude more sensitive than the direct analysis of water. (author)

  4. Multispectral colour analysis for quantitative evaluation of pseudoisochromatic color deficiency tests

    Science.gov (United States)

    Ozolinsh, Maris; Fomins, Sergejs

    2010-11-01

    Multispectral color analysis was used for spectral scanning of Ishihara and Rabkin color deficiency test book images. It was done using tunable liquid-crystal LC filters built in the Nuance II analyzer. Multispectral analysis keeps both, information on spatial content of tests and on spectral content. Images were taken in the range of 420-720nm with a 10nm step. We calculated retina neural activity charts taking into account cone sensitivity functions, and processed charts in order to find the visibility of latent symbols in color deficiency plates using cross-correlation technique. In such way the quantitative measure is found for each of diagnostics plate for three different color deficiency carrier types - protanopes, deutanopes and tritanopes. Multispectral color analysis allows to determine the CIE xyz color coordinates of pseudoisochromatic plate design elements and to perform statistical analysis of these data to compare the color quality of available color deficiency test books.

  5. Quantitatively differentiating microstructural variations of skeletal muscle tissues by multispectral Mueller matrix imaging

    Science.gov (United States)

    Dong, Yang; He, Honghui; He, Chao; Ma, Hui

    2016-10-01

    Polarized light is sensitive to the microstructures of biological tissues and can be used to detect physiological changes. Meanwhile, spectral features of the scattered light can also provide abundant microstructural information of tissues. In this paper, we take the backscattering polarization Mueller matrix images of bovine skeletal muscle tissues during the 24-hour experimental time, and analyze their multispectral behavior using quantitative Mueller matrix parameters. In the processes of rigor mortis and proteolysis of muscle samples, multispectral frequency distribution histograms (FDHs) of the Mueller matrix elements can reveal rich qualitative structural information. In addition, we analyze the temporal variations of the sample using the multispectral Mueller matrix transformation (MMT) parameters. The experimental results indicate that the different stages of rigor mortis and proteolysis for bovine skeletal muscle samples can be judged by these MMT parameters. The results presented in this work show that combining with the multispectral technique, the FDHs and MMT parameters can characterize the microstructural variation features of skeletal muscle tissues. The techniques have the potential to be used as tools for quantitative assessment of meat qualities in food industry.

  6. Quantitative imaging of tumor vasculature using multispectral optoacoustic tomography (MSOT)

    Science.gov (United States)

    Tomaszewski, Michal R.; Quiros-Gonzalez, Isabel; Joseph, James; Bohndiek, Sarah E.

    2017-03-01

    The ability to evaluate tumor oxygenation in the clinic could indicate prognosis and enable treatment monitoring, since oxygen deficient cancer cells are often more resistant to chemotherapy and radiotherapy. MultiSpectral Optoacoustic Tomography (MSOT) is a hybrid technique combining the high contrast of optical imaging with spatial resolution and penetration depth similar to ultrasound. We hypothesized that MSOT could reveal both tumor vascular density and function based on modulation of blood oxygenation. We performed MSOT on nude mice (n=8) bearing subcutaneous xenograft PC3 tumors using an inVision 256 (iThera Medical). The mice were maintained under inhalation anesthesia during imaging and respired oxygen content was modified from 21% to 100% and back. After imaging, Hoechst 33348 was injected to indicate vascular perfusion and permeability. Tumors were then extracted for histopathological analysis and fluorescence microscopy. The acquired data was analyzed to extract a bulk measurement of blood oxygenation (SO2MSOT) from the whole tumor using different approaches. The tumors were also automatically segmented into 5 regions to investigate the effect of depth on SO2MSOT. Baseline SO2MSOT values at 21% and 100% oxygen breathing showed no relationship with ex vivo measures of vascular density or function, while the change in SO2MSOT showed a strong negative correlation to Hoechst intensity (r=- 0.92, p=0.0016). Tumor voxels responding to oxygen challenge were spatially heterogeneous. We observed a significant drop in SO2 MSOT value with tumor depth following a switch of respiratory gas from air to oxygen (0.323+/-0.017 vs. 0.11+/-0.05, p=0.009 between 0 and 1.5mm depth), but no such effect for air breathing (0.265+/-0.013 vs. 0.19+/-0.04, p=0.14 between 0 and 1.5mm depth). Our results indicate that in subcutaneous prostate tumors, baseline SO2MSOT levels do not correlate to tumor vascular density or function while the magnitude of the response to oxygen

  7. Multi-spectral quantitative phase imaging based on filtration of light via ultrasonic wave

    Science.gov (United States)

    Machikhin, A. S.; Polschikova, O. V.; Ramazanova, A. G.; Pozhar, V. E.

    2017-07-01

    A new digital holographic microscopy scheme for multi-spectral quantitative phase imaging is proposed and implemented. It is based on acousto-optic filtration of wide-band low-coherence light at the entrance of a Mach-Zehnder interferometer, recording and digital processing of interferograms. The key requirements for the acousto-optic filter are discussed. The effectiveness of the technique is demonstrated by calculating the phase maps of human red blood cells at multiple wavelengths in the range 770-810 nm. The scheme can be used for the measurement of dispersion of thin films and biological samples.

  8. Using Non-Invasive Multi-Spectral Imaging to Quantitatively Assess Tissue Vasculature

    Energy Technology Data Exchange (ETDEWEB)

    Vogel, A; Chernomordik, V; Riley, J; Hassan, M; Amyot, F; Dasgeb, B; Demos, S G; Pursley, R; Little, R; Yarchoan, R; Tao, Y; Gandjbakhche, A H

    2007-10-04

    This research describes a non-invasive, non-contact method used to quantitatively analyze the functional characteristics of tissue. Multi-spectral images collected at several near-infrared wavelengths are input into a mathematical optical skin model that considers the contributions from different analytes in the epidermis and dermis skin layers. Through a reconstruction algorithm, we can quantify the percent of blood in a given area of tissue and the fraction of that blood that is oxygenated. Imaging normal tissue confirms previously reported values for the percent of blood in tissue and the percent of blood that is oxygenated in tissue and surrounding vasculature, for the normal state and when ischemia is induced. This methodology has been applied to assess vascular Kaposi's sarcoma lesions and the surrounding tissue before and during experimental therapies. The multi-spectral imaging technique has been combined with laser Doppler imaging to gain additional information. Results indicate that these techniques are able to provide quantitative and functional information about tissue changes during experimental drug therapy and investigate progression of disease before changes are visibly apparent, suggesting a potential for them to be used as complementary imaging techniques to clinical assessment.

  9. Assessing the accuracy of hyperspectral and multispectral satellite imagery for categorical and quantitative mapping of salinity stress in sugarcane fields

    NARCIS (Netherlands)

    Hamzeh, Saied; Naseri, Abd Ali; Alavipanah, Seyed Kazem; Bartholomeus, Harm; Herold, Martin

    2016-01-01

    This study evaluates the feasibility of hyperspectral and multispectral satellite imagery for categorical and quantitative mapping of salinity stress in sugarcane fields located in the southwest of Iran. For this purpose a Hyperion image acquired on September 2, 2010 and a Landsat7 ETM+ image

  10. Estimation of the number of fluorescent end-members for quantitative analysis of multispectral FLIM data.

    Science.gov (United States)

    Gutierrez-Navarro, Omar; Campos-Delgado, Daniel U; Arce-Santana, Edgar R; Maitland, Kristen C; Cheng, Shuna; Jabbour, Joey; Malik, Bilal; Cuenca, Rodrigo; Jo, Javier A

    2014-05-19

    Multispectral fluorescence lifetime imaging (m-FLIM) can potentially allow identifying the endogenous fluorophores present in biological tissue. Quantitative description of such data requires estimating the number of components in the sample, their characteristic fluorescent decays, and their relative contributions or abundances. Unfortunately, this inverse problem usually requires prior knowledge about the data, which is seldom available in biomedical applications. This work presents a new methodology to estimate the number of potential endogenous fluorophores present in biological tissue samples from time-domain m-FLIM data. Furthermore, a completely blind linear unmixing algorithm is proposed. The method was validated using both synthetic and experimental m-FLIM data. The experimental m-FLIM data include in-vivo measurements from healthy and cancerous hamster cheek-pouch epithelial tissue, and ex-vivo measurements from human coronary atherosclerotic plaques. The analysis of m-FLIM data from in-vivo hamster oral mucosa identified healthy from precancerous lesions, based on the relative concentration of their characteristic fluorophores. The algorithm also provided a better description of atherosclerotic plaques in term of their endogenous fluorophores. These results demonstrate the potential of this methodology to provide quantitative description of tissue biochemical composition.

  11. A sensitive and quantitative biosensing method for the determination of {gamma}-ray emitting radionuclides in surface water

    Energy Technology Data Exchange (ETDEWEB)

    Wolterbeek, H.Th.; Meer, A.J.G.M. van der [Technische Univ. Delft (Netherlands). Interfacultair Reactor Inst.

    1996-11-01

    A quantitative and sensitive biosensing method has been developed for the determination of {gamma}-ray emitting radionuclides in surface water. The method is based on the concept that at equilibrium the specific radioactivity in the biosensor is equal to the specific radioactivity in water. The method consists of the measurement of both the radionuclide and the element in the biosensor and the determination of the element level in water. This three-way analysis eliminates problems such as unpredictable biosensor behaviour, effects of water elemental composition or further abiotic parameters: what remains is the generally high enrichment (bioaccumulation factor BCF) of elements and radionuclides in the biosensor material. Measurements were performed with floating water plants (Azolla filiculoides Lamk., Spirodela polyrhiza/Lemna sp.) and the fully submerged water plant Ceratophyllum demersum L., which were sampled from ditch water. Concentrations of elements and radionuclides were determined in both water and biosensor plants, using Neutron Activation Analysis (NAA), ICP-MS, and {gamma}-ray spectrometry, respectively. For the latter, both 1 litre samples (Marinelli-geometry) and 1 cm{sup 3} samples (well-type detectors) were applied in measurements. (author).

  12. A sensitive and quantitative biosensing method for the determination of γ-ray emitting radionuclides in surface water

    International Nuclear Information System (INIS)

    Wolterbeek, H.Th.; Meer, A.J.G.M. van der

    1996-01-01

    A quantitative and sensitive biosensing method has been developed for the determination of γ-ray emitting radionuclides in surface water. The method is based on the concept that at equilibrium the specific radioactivity in the biosensor is equal to the specific radioactivity in water. The method consists of the measurement of both the radionuclide and the element in the biosensor and the determination of the element level in water. This three-way analysis eliminates problems such as unpredictable biosensor behaviour, effects of water elemental composition or further abiotic parameters: what remains is the generally high enrichment (bioaccumulation factor BCF) of elements and radionuclides in the biosensor material. Measurements were performed with floating water plants (Azolla filiculoides Lamk., Spirodela polyrhiza/Lemna sp.) and the fully submerged water plant Ceratophyllum demersum L., which were sampled from ditch water. Concentrations of elements and radionuclides were determined in both water and biosensor plants, using Neutron Activation Analysis (NAA), ICP-MS, and γ-ray spectrometry, respectively. For the latter, both 1 litre samples (Marinelli-geometry) and 1 cm 3 samples (well-type detectors) were applied in measurements. (author)

  13. Quantitative functional optical imaging of the human skin using multi-spectral imaging

    International Nuclear Information System (INIS)

    Kainerstorfer, J. M.

    2010-01-01

    Light tissue interactions can be described by the physical principles of absorption and scattering. Based on those parameters, different tissue types and analytes can be distinguished. Extracting blood volume and oxygenation is of particular interest in clinical routines for tumor diagnostics and treatment follow up, since they are parameters of angiogenic processes. The quantification of those analytes in tissue can be done by physical modeling of light tissue interaction. The physical model used here is the random walk theory. However, for quantification and clinical usefulness, one has to account for multiple challenges. First, one must consider the effect of topology of the sample on measured physical parameters. Second, diffusion of light inside the tissue is dependent on the structure of the sample imaged. Thus, the structural conformation has to be taken into account. Third, clinical translation of imaging modalities is often hindered due to the complicated post-processing of data, not providing results in real-time. In this thesis, two imaging modalities are being utilized, where the first one, diffuse multi-spectral imaging, is based on absorption contrast and spectral characteristics and the second one, Optical Coherence Tomography (OCT), is based on scattering changes within the tissue. Multi-spectral imaging can provide spatial distributions of blood volume and blood oxygenation and OCT yields 3D structural images with micrometer resolution. In order to address the challenges mentioned above, a curvature correction algorithm for taking the topology into account was developed. Without taking curvature of the object into account, reconstruction of optical properties is not accurate. The method developed removes this artifact and recovers the underlying data, without the necessity of measuring the object's shape. The next step was to recover blood volume and oxygenation values in real time. Principal Component Analysis (PCA) on multi spectral images is

  14. Quantitative mouse brain phenotyping based on single and multispectral MR protocols

    Science.gov (United States)

    Badea, Alexandra; Gewalt, Sally; Avants, Brian B.; Cook, James J.; Johnson, G. Allan

    2013-01-01

    Sophisticated image analysis methods have been developed for the human brain, but such tools still need to be adapted and optimized for quantitative small animal imaging. We propose a framework for quantitative anatomical phenotyping in mouse models of neurological and psychiatric conditions. The framework encompasses an atlas space, image acquisition protocols, and software tools to register images into this space. We show that a suite of segmentation tools (Avants, Epstein et al., 2008) designed for human neuroimaging can be incorporated into a pipeline for segmenting mouse brain images acquired with multispectral magnetic resonance imaging (MR) protocols. We present a flexible approach for segmenting such hyperimages, optimizing registration, and identifying optimal combinations of image channels for particular structures. Brain imaging with T1, T2* and T2 contrasts yielded accuracy in the range of 83% for hippocampus and caudate putamen (Hc and CPu), but only 54% in white matter tracts, and 44% for the ventricles. The addition of diffusion tensor parameter images improved accuracy for large gray matter structures (by >5%), white matter (10%), and ventricles (15%). The use of Markov random field segmentation further improved overall accuracy in the C57BL/6 strain by 6%; so Dice coefficients for Hc and CPu reached 93%, for white matter 79%, for ventricles 68%, and for substantia nigra 80%. We demonstrate the segmentation pipeline for the widely used C57BL/6 strain, and two test strains (BXD29, APP/TTA). This approach appears promising for characterizing temporal changes in mouse models of human neurological and psychiatric conditions, and may provide anatomical constraints for other preclinical imaging, e.g. fMRI and molecular imaging. This is the first demonstration that multiple MR imaging modalities combined with multivariate segmentation methods lead to significant improvements in anatomical segmentation in the mouse brain. PMID:22836174

  15. The Impact of Quantitative Data Provided by a Multi-spectral Digital Skin Lesion Analysis Device on Dermatologists'Decisions to Biopsy Pigmented Lesions.

    Science.gov (United States)

    Farberg, Aaron S; Winkelmann, Richard R; Tucker, Natalie; White, Richard; Rigel, Darrell S

    2017-09-01

    BACKGROUND: Early diagnosis of melanoma is critical to survival. New technologies, such as a multi-spectral digital skin lesion analysis (MSDSLA) device [MelaFind, STRATA Skin Sciences, Horsham, Pennsylvania] may be useful to enhance clinician evaluation of concerning pigmented skin lesions. Previous studies evaluated the effect of only the binary output. OBJECTIVE: The objective of this study was to determine how decisions dermatologists make regarding pigmented lesion biopsies are impacted by providing both the underlying classifier score (CS) and associated probability risk provided by multi-spectral digital skin lesion analysis. This outcome was also compared against the improvement reported with the provision of only the binary output. METHODS: Dermatologists attending an educational conference evaluated 50 pigmented lesions (25 melanomas and 25 benign lesions). Participants were asked if they would biopsy the lesion based on clinical images, and were asked this question again after being shown multi-spectral digital skin lesion analysis data that included the probability graphs and classifier score. RESULTS: Data were analyzed from a total of 160 United States board-certified dermatologists. Biopsy sensitivity for melanoma improved from 76 percent following clinical evaluation to 92 percent after quantitative multi-spectral digital skin lesion analysis information was provided ( p quantitative data were provided. Negative predictive value also increased (68% vs. 91%, panalysis (64% vs. 86%, p data into physician evaluation of pigmented lesions led to both increased sensitivity and specificity, thereby resulting in more accurate biopsy decisions.

  16. Quantitative analysis of aircraft multispectral-scanner data and mapping of water-quality parameters in the James River in Virginia

    Science.gov (United States)

    Johnson, R. W.; Bahn, G. S.

    1977-01-01

    Statistical analysis techniques were applied to develop quantitative relationships between in situ river measurements and the remotely sensed data that were obtained over the James River in Virginia on 28 May 1974. The remotely sensed data were collected with a multispectral scanner and with photographs taken from an aircraft platform. Concentration differences among water quality parameters such as suspended sediment, chlorophyll a, and nutrients indicated significant spectral variations. Calibrated equations from the multiple regression analysis were used to develop maps that indicated the quantitative distributions of water quality parameters and the dispersion characteristics of a pollutant plume entering the turbid river system. Results from further analyses that use only three preselected multispectral scanner bands of data indicated that regression coefficients and standard errors of estimate were not appreciably degraded compared with results from the 10-band analysis.

  17. Remote quantitative analysis of minerals based on multispectral line-calibrated laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Wan, Xiong; Wang, Peng

    2014-01-01

    Laser-induced breakdown spectroscopy (LIBS) is a feasible remote sensing technique used for mineral analysis in some unapproachable places where in situ probing is needed, such as analysis of radioactive elements in a nuclear leak or the detection of elemental compositions and contents of minerals on planetary and lunar surfaces. Here a compact custom 15 m focus optical component, combining a six times beam expander with a telescope, has been built, with which the laser beam of a 1064 nm Nd ; YAG laser is focused on remote minerals. The excited LIBS signals that reveal the elemental compositions of minerals are collected by another compact single lens-based signal acquisition system. In our remote LIBS investigations, the LIBS spectra of an unknown ore have been detected, from which the metal compositions are obtained. In addition, a multi-spectral line calibration (MSLC) method is proposed for the quantitative analysis of elements. The feasibility of the MSLC and its superiority over a single-wavelength determination have been confirmed by comparison with traditional chemical analysis of the copper content in the ore.

  18. Method using in vivo quantitative spectroscopy to guide design and optimization of low-cost, compact clinical imaging devices: emulation and evaluation of multispectral imaging systems

    Science.gov (United States)

    Saager, Rolf B.; Baldado, Melissa L.; Rowland, Rebecca A.; Kelly, Kristen M.; Durkin, Anthony J.

    2018-04-01

    With recent proliferation in compact and/or low-cost clinical multispectral imaging approaches and commercially available components, questions remain whether they adequately capture the requisite spectral content of their applications. We present a method to emulate the spectral range and resolution of a variety of multispectral imagers, based on in-vivo data acquired from spatial frequency domain spectroscopy (SFDS). This approach simulates spectral responses over 400 to 1100 nm. Comparing emulated data with full SFDS spectra of in-vivo tissue affords the opportunity to evaluate whether the sparse spectral content of these imagers can (1) account for all sources of optical contrast present (completeness) and (2) robustly separate and quantify sources of optical contrast (crosstalk). We validate the approach over a range of tissue-simulating phantoms, comparing the SFDS-based emulated spectra against measurements from an independently characterized multispectral imager. Emulated results match the imager across all phantoms (<3 % absorption, <1 % reduced scattering). In-vivo test cases (burn wounds and photoaging) illustrate how SFDS can be used to evaluate different multispectral imagers. This approach provides an in-vivo measurement method to evaluate the performance of multispectral imagers specific to their targeted clinical applications and can assist in the design and optimization of new spectral imaging devices.

  19. Biosensing International Research and Development

    CERN Document Server

    Schultz, Jerome; Mrksich, Milan

    2006-01-01

    The goal of this book is to disseminate information on the worldwide status and trends in biosensing R&D to government decisionmakers and the research community. The contributors critically analyze and compare biosensing research in the United States with that being pursued in Japan, Europe and other major industrialized countries. Biosensing includes systems that incorporate a variety of means, including electrical, electronic, and photonic devices; biological materials (e.g., tissue, enzymes, nucleic acids, etc.); and chemical analysis to produce detectable signals for the monitoring or identification of biological phenomena. In a broader sense, the study of biosensing includes any approach to detection of biological elements and the associated software or computer identification technologies (e.g., imaging) that identify biological characteristics. Biosensing is finding a growing number of applications in a wide variety of areas, including biomedicine, food production and processing, and detection of b...

  20. Quantitative MR imaging of intra-orbital structures: Tissue-specific measurements and age dependency compared to extra-orbital structures using multispectral quantitative MR imaging.

    Science.gov (United States)

    Watanabe, Memi; Buch, Karen; Fujita, Akifumi; Jara, Hernán; Qureshi, Muhammad Mustafa; Sakai, Osamu

    2017-08-01

    The orbit can be affected by unique pathologic conditions and often requires MRI evaluation. The purpose of this study was to investigate the age-related changes in multiple intra-orbital structures using quantitative MRI (qMRI). Thirty-eight subjects (20 males, 18 females; ages 0.5-87 years) underwent MRI with a mixed turbo spin echo sequence. T1 and T2 measurements were obtained within ROI in 6 intra-orbital structures (medial and lateral rectus muscles, medial and lateral retrobulbar fat, lacrimal gland, and optic nerve), and compared with those of corresponding extra-orbital structures (masseter muscle, subcutaneous cheek fat, buccal fat, parotid gland, and frontal white matter). Statistical analyses were performed using Pearson's correlation coefficients. T1 and T2 values of the extra-ocular muscles increased with age, with higher T1 and T2 values compared to the masseter muscles. Retrobulbar fat showed significant age-associated increases in T1 values in the lateral side and in T2 values in both sides. T1 and T2 values in the lacrimal gland increased with age, while the parotid gland showed an age-associated increase in T2 values and decrease in T1 values. Optic nerves demonstrated age-related changes, similar to that of frontal white matter; rapid decreases with age in T1 and T2 times in early stages of life, and slight increases in T1 and T2 times later in life. Intra-orbital structures demonstrated specific qMRI measurements and aging patterns, which were different from extra-orbital structures. Location-specific age-related changes of intra-orbital structures should be considered in the qMRI assessment of the orbital pathology.

  1. CDC BioSense: Tarrant County, Texas

    Data.gov (United States)

    U.S. Department of Health & Human Services — The Tarrant County Public Health (TCPH) and Biosense collaboration is an effort to visualize TCPH health data collected by Biosense using Google Fusion Table...

  2. Interrogating Biosensing in Everyday Life

    DEFF Research Database (Denmark)

    Merrill, Nick; Wong, Richmond; Howell, Noura

    2017-01-01

    This workshop seeks to expand our understanding and imaginations regarding the possible roles biosensors (sensors measuring humans) can-and should-play in everyday life. By applying a critical lens to issues of interpretation, representation, and experience around biosensing and biosensors, we ai...

  3. Multispectral Imaging for Determination of Astaxanthin Concentration in Salmonids

    DEFF Research Database (Denmark)

    Dissing, Bjørn Skovlund; Nielsen, Michael Engelbrecht; Ersbøll, Bjarne Kjær

    2011-01-01

    Multispectral imaging has been evaluated for characterization of the concentration of a specific cartenoid pigment; astaxanthin. 59 fillets of rainbow trout, Oncorhynchus mykiss, were filleted and imaged using a rapid multispectral imaging device for quantitative analysis. The multispectral imaging...... device captures reflection properties in 19 distinct wavelength bands, prior to determination of the true concentration of astaxanthin. The samples ranged from 0.20 to 4.34 mu g per g fish. A PLSR model was calibrated to predict astaxanthin concentration from novel images, and showed good results...... concentration in rainbow trout fillets....

  4. Advances in Biosensing Methods

    Directory of Open Access Journals (Sweden)

    Reema Taneja

    2007-02-01

    Full Text Available A fractal analysis is presented for the binding and dissociation (if applicable kinetics of analyte-receptor reactions occurring on biosensor surfaces. The applications of the biosensors have appeared in the recent literature. The examples provided together provide the reader with a perspective of the advances in biosensors that are being used to detect analytes of interest. This should also stimulate interest in applying biosensors to other areas of application. The fractal analysis limits the evaluation of the rate constants for binding and dissociation (if applicable for the analyte-receptor reactions occurring in biosensor surfaces. The fractal dimension provides a quantitative measure of the degree of heterogeneity on the biosensor surface. Predictive relations are presented that relate the binding co-efficient with the degree of heterogeneity or the fractal dimension on the biosensor surface

  5. Multispectral imaging for biometrics

    Science.gov (United States)

    Rowe, Robert K.; Corcoran, Stephen P.; Nixon, Kristin A.; Ostrom, Robert E.

    2005-03-01

    Automated identification systems based on fingerprint images are subject to two significant types of error: an incorrect decision about the identity of a person due to a poor quality fingerprint image and incorrectly accepting a fingerprint image generated from an artificial sample or altered finger. This paper discusses the use of multispectral sensing as a means to collect additional information about a finger that significantly augments the information collected using a conventional fingerprint imager based on total internal reflectance. In the context of this paper, "multispectral sensing" is used broadly to denote a collection of images taken under different polarization conditions and illumination configurations, as well as using multiple wavelengths. Background information is provided on conventional fingerprint imaging. A multispectral imager for fingerprint imaging is then described and a means to combine the two imaging systems into a single unit is discussed. Results from an early-stage prototype of such a system are shown.

  6. Noble Metal Nanoparticles for Biosensing Applications

    Directory of Open Access Journals (Sweden)

    Pedro V. Baptista

    2012-02-01

    Full Text Available In the last decade the use of nanomaterials has been having a great impact in biosensing. In particular, the unique properties of noble metal nanoparticles have allowed for the development of new biosensing platforms with enhanced capabilities in the specific detection of bioanalytes. Noble metal nanoparticles show unique physicochemical properties (such as ease of functionalization via simple chemistry and high surface-to-volume ratios that allied with their unique spectral and optical properties have prompted the development of a plethora of biosensing platforms. Additionally, they also provide an additional or enhanced layer of application for commonly used techniques, such as fluorescence, infrared and Raman spectroscopy. Herein we review the use of noble metal nanoparticles for biosensing strategies—from synthesis and functionalization to integration in molecular diagnostics platforms, with special focus on those that have made their way into the diagnostics laboratory.

  7. Multispectral Image Feature Points

    Directory of Open Access Journals (Sweden)

    Cristhian Aguilera

    2012-09-01

    Full Text Available This paper presents a novel feature point descriptor for the multispectral image case: Far-Infrared and Visible Spectrum images. It allows matching interest points on images of the same scene but acquired in different spectral bands. Initially, points of interest are detected on both images through a SIFT-like based scale space representation. Then, these points are characterized using an Edge Oriented Histogram (EOH descriptor. Finally, points of interest from multispectral images are matched by finding nearest couples using the information from the descriptor. The provided experimental results and comparisons with similar methods show both the validity of the proposed approach as well as the improvements it offers with respect to the current state-of-the-art.

  8. Multispectral analytical image fusion

    International Nuclear Information System (INIS)

    Stubbings, T.C.

    2000-04-01

    With new and advanced analytical imaging methods emerging, the limits of physical analysis capabilities and furthermore of data acquisition quantities are constantly pushed, claiming high demands to the field of scientific data processing and visualisation. Physical analysis methods like Secondary Ion Mass Spectrometry (SIMS) or Auger Electron Spectroscopy (AES) and others are capable of delivering high-resolution multispectral two-dimensional and three-dimensional image data; usually this multispectral data is available in form of n separate image files with each showing one element or other singular aspect of the sample. There is high need for digital image processing methods enabling the analytical scientist, confronted with such amounts of data routinely, to get rapid insight into the composition of the sample examined, to filter the relevant data and to integrate the information of numerous separate multispectral images to get the complete picture. Sophisticated image processing methods like classification and fusion provide possible solution approaches to this challenge. Classification is a treatment by multivariate statistical means in order to extract analytical information. Image fusion on the other hand denotes a process where images obtained from various sensors or at different moments of time are combined together to provide a more complete picture of a scene or object under investigation. Both techniques are important for the task of information extraction and integration and often one technique depends on the other. Therefore overall aim of this thesis is to evaluate the possibilities of both techniques regarding the task of analytical image processing and to find solutions for the integration and condensation of multispectral analytical image data in order to facilitate the interpretation of the enormous amounts of data routinely acquired by modern physical analysis instruments. (author)

  9. Multispectral thermal imaging

    Energy Technology Data Exchange (ETDEWEB)

    Weber, P.G.; Bender, S.C.; Borel, C.C.; Clodius, W.B.; Smith, B.W. [Los Alamos National Lab., NM (United States). Space and Remote Sensing Sciences Group; Garrett, A.; Pendergast, M.M. [Westinghouse Savannah River Corp., Aiken, SC (United States). Savannah River Technology Center; Kay, R.R. [Sandia National Lab., Albuquerque, NM (United States). Monitoring Systems and Technology Center

    1998-12-01

    Many remote sensing applications rely on imaging spectrometry. Here the authors use imaging spectrometry for thermal and multispectral signatures measured from a satellite platform enhanced with a combination of accurate calibrations and on-board data for correcting atmospheric distortions. The approach is supported by physics-based end-to-end modeling and analysis, which permits a cost-effective balance between various hardware and software aspects. The goal is to develop and demonstrate advanced technologies and analysis tools toward meeting the needs of the customer; at the same time, the attributes of this system can address other applications in such areas as environmental change, agriculture, and volcanology.

  10. Biosensing by WGM Microspherical Resonators

    Directory of Open Access Journals (Sweden)

    Giancarlo C. Righini

    2016-06-01

    Full Text Available Whispering gallery mode (WGM microresonators, thanks to their unique properties, have allowed researchers to achieve important results in both fundamental research and engineering applications. Among the various geometries, microspheres are the simplest 3D WGM resonators; the total optical loss in such resonators can be extremely low, and the resulting extraordinarily high Q values of 108–109 lead to high energy density, narrow resonant-wavelength lines and a lengthy cavity ringdown. They can also be coated in order to better control their properties or to increase their functionality. Their very high sensitivity to changes in the surrounding medium has been exploited for several sensing applications: protein adsorption, trace gas detection, impurity detection in liquids, structural health monitoring of composite materials, detection of electric fields, pressure sensing, and so on. In the present paper, after a general introduction to WGM resonators, attention is focused on spherical microresonators, either in bulk or in bubble format, to their fabrication, characterization and functionalization. The state of the art in the area of biosensing is presented, and the perspectives of further developments are discussed.

  11. Prospects of Nanobiomaterials for Biosensing

    Directory of Open Access Journals (Sweden)

    Ravindra P. Singh

    2011-01-01

    Full Text Available Progress and development in biosensor development will inevitably focus upon the technology of the nanomaterials that offer promise to solve the biocompatibility and biofouling problems. The biosensors using smart nanomaterials have applications for rapid, specific, sensitive, inexpensive, in-field, on-line and/or real-time detection of pesticides, antibiotics, pathogens, toxins, proteins, microbes, plants, animals, foods, soil, air, and water. Thus, biosensors are excellent analytical tools for pollution monitoring, by which implementation of legislative provisions to safeguard our biosphere could be made effectively plausible. The current trends and challenges with nanomaterials for various applications will have focus biosensor development and miniaturization. All these growing areas will have a remarkable influence on the development of new ultrasensitive biosensing devices to resolve the severe pollution problems in the future that not only challenges the human health but also affects adversely other various comforts to living entities. This review paper summarizes recent progress in the development of biosensors by integrating functional biomolecules with different types of nanomaterials, including metallic nanoparticles, semiconductor nanoparticles, magnetic nanoparticles, inorganic/organic hybrid, dendrimers, and carbon nanotubes/graphene.

  12. NanoBiosensing Principles, Development and Application

    CERN Document Server

    Ju, Huangxian; Wang, Joseph

    2011-01-01

    This book will cover the full scope of nanobiosensing, which combines the newest research results in the cross-disciplines of chemistry, biology, and materials science with biosensing and bioanalysis to develop novel detection principles, sensing mechanisms, and device engineering methods. It not only covers the important types of nanomaterials for biosensing applications, including carbon nanotubes, carbon nanofiber, quantum dots, fullerenes, fluorescent and biological molecules, etc., but also illustrates a wide range of sensing principles, including electrochemical detection, fluorescence, chemiluminesence, antibody-antigen interactions, and magnetic detection. The book details novel developments in the methodology and devices of biosensing and bioanalysis combined with nanoscience and nanotechnology, as well as their applications in biomedicine and environmental monitoring. Furthermore, the reported works on the application and biofunction of nanoparticles have attracted extensive attention and interest, ...

  13. Skin condition measurement by using multispectral imaging system (Conference Presentation)

    Science.gov (United States)

    Jung, Geunho; Kim, Sungchul; Kim, Jae Gwan

    2017-02-01

    There are a number of commercially available low level light therapy (LLLT) devices in a market, and face whitening or wrinkle reduction is one of targets in LLLT. The facial improvement could be known simply by visual observation of face, but it cannot provide either quantitative data or recognize a subtle change. Clinical diagnostic instruments such as mexameter can provide a quantitative data, but it costs too high for home users. Therefore, we designed a low cost multi-spectral imaging device by adding additional LEDs (470nm, 640nm, white LED, 905nm) to a commercial USB microscope which has two LEDs (395nm, 940nm) as light sources. Among various LLLT skin treatments, we focused on getting melanin and wrinkle information. For melanin index measurements, multi-spectral images of nevus were acquired and melanin index values from color image (conventional method) and from multi-spectral images were compared. The results showed that multi-spectral analysis of melanin index can visualize nevus with a different depth and concentration. A cross section of wrinkle on skin resembles a wedge which can be a source of high frequency components when the skin image is Fourier transformed into a spatial frequency domain map. In that case, the entropy value of the spatial frequency map can represent the frequency distribution which is related with the amount and thickness of wrinkle. Entropy values from multi-spectral images can potentially separate the percentage of thin and shallow wrinkle from thick and deep wrinkle. From the results, we found that this low cost multi-spectral imaging system could be beneficial for home users of LLLT by providing the treatment efficacy in a quantitative way.

  14. Biosensing with optical fiber gratings

    Science.gov (United States)

    Chiavaioli, Francesco; Baldini, Francesco; Tombelli, Sara; Trono, Cosimo; Giannetti, Ambra

    2017-06-01

    Optical fiber gratings (OFGs), especially long-period gratings (LPGs) and etched or tilted fiber Bragg gratings (FBGs), are playing an increasing role in the chemical and biochemical sensing based on the measurement of a surface refractive index (RI) change through a label-free configuration. In these devices, the electric field evanescent wave at the fiber/surrounding medium interface changes its optical properties (i.e. intensity and wavelength) as a result of the RI variation due to the interaction between a biological recognition layer deposited over the fiber and the analyte under investigation. The use of OFG-based technology platforms takes the advantages of optical fiber peculiarities, which are hardly offered by the other sensing systems, such as compactness, lightness, high compatibility with optoelectronic devices (both sources and detectors), and multiplexing and remote measurement capability as the signal is spectrally modulated. During the last decade, the growing request in practical applications pushed the technology behind the OFG-based sensors over its limits by means of the deposition of thin film overlays, nanocoatings, and nanostructures, in general. Here, we review efforts toward utilizing these nanomaterials as coatings for high-performance and low-detection limit devices. Moreover, we review the recent development in OFG-based biosensing and identify some of the key challenges for practical applications. While high-performance metrics are starting to be achieved experimentally, there are still open questions pertaining to an effective and reliable detection of small molecules, possibly up to single molecule, sensing in vivo and multi-target detection using OFG-based technology platforms.

  15. Biosensing with optical fiber gratings

    Directory of Open Access Journals (Sweden)

    Chiavaioli Francesco

    2017-06-01

    Full Text Available Optical fiber gratings (OFGs, especially long-period gratings (LPGs and etched or tilted fiber Bragg gratings (FBGs, are playing an increasing role in the chemical and biochemical sensing based on the measurement of a surface refractive index (RI change through a label-free configuration. In these devices, the electric field evanescent wave at the fiber/surrounding medium interface changes its optical properties (i.e. intensity and wavelength as a result of the RI variation due to the interaction between a biological recognition layer deposited over the fiber and the analyte under investigation. The use of OFG-based technology platforms takes the advantages of optical fiber peculiarities, which are hardly offered by the other sensing systems, such as compactness, lightness, high compatibility with optoelectronic devices (both sources and detectors, and multiplexing and remote measurement capability as the signal is spectrally modulated. During the last decade, the growing request in practical applications pushed the technology behind the OFG-based sensors over its limits by means of the deposition of thin film overlays, nanocoatings, and nanostructures, in general. Here, we review efforts toward utilizing these nanomaterials as coatings for high-performance and low-detection limit devices. Moreover, we review the recent development in OFG-based biosensing and identify some of the key challenges for practical applications. While high-performance metrics are starting to be achieved experimentally, there are still open questions pertaining to an effective and reliable detection of small molecules, possibly up to single molecule, sensing in vivo and multi-target detection using OFG-based technology platforms.

  16. Multispectral Microimager for Astrobiology

    Science.gov (United States)

    Sellar, R. Glenn; Farmer, Jack D.; Kieta, Andrew; Huang, Julie

    2006-01-01

    A primary goal of the astrobiology program is the search for fossil records. The astrobiology exploration strategy calls for the location and return of samples indicative of environments conducive to life, and that best capture and preserve biomarkers. Successfully returning samples from environments conducive to life requires two primary capabilities: (1) in situ mapping of the mineralogy in order to determine whether the desired minerals are present; and (2) nondestructive screening of samples for additional in-situ testing and/or selection for return to laboratories for more in-depth examination. Two of the most powerful identification techniques are micro-imaging and visible/infrared spectroscopy. The design and test results are presented from a compact rugged instrument that combines micro-imaging and spectroscopic capability to provide in-situ analysis, mapping, and sample screening capabilities. Accurate reflectance spectra should be a measure of reflectance as a function of wavelength only. Other compact multispectral microimagers use separate LEDs (light-emitting diodes) for each wavelength and therefore vary the angles of illumination when changing wavelengths. When observing a specularly-reflecting sample, this produces grossly inaccurate spectra due to the variation in the angle of illumination. An advanced design and test results are presented for a multispectral microimager which demonstrates two key advances relative to previous LED-based microimagers: (i) acquisition of actual reflectance spectra in which the flux is a function of wavelength only, rather than a function of both wavelength and illumination geometry; and (ii) increase in the number of spectral bands to eight bands covering a spectral range of 468 to 975 nm.

  17. Highly sensitive biosensing based on interference from light scattering in capillary tubes

    DEFF Research Database (Denmark)

    Sørensen, H.S.; Larsen, N.B.; Latham, J.C.

    2006-01-01

    Human IgG interactions with surface bound protein A are monitored label-free using microinterferometric backscatter detection. An electromagnetic wave-based model is developed and used to quantitatively describe the change in interference pattern as a consequence of the molecular interaction...... to other specific interacting layers, and simplicity of the optical sensor make this technique a powerful tool in biosensing. (c) 2006 American Institute of Physics....

  18. Considerations on Circuit Design and Data Acquisition of a Portable Surface Plasmon Resonance Biosensing System

    Directory of Open Access Journals (Sweden)

    Keke Chang

    2015-08-01

    Full Text Available The aim of this study was to develop a circuit for an inexpensive portable biosensing system based on surface plasmon resonance spectroscopy. This portable biosensing system designed for field use is characterized by a special structure which consists of a microfluidic cell incorporating a right angle prism functionalized with a biomolecular identification membrane, a laser line generator and a data acquisition circuit board. The data structure, data memory capacity and a line charge-coupled device (CCD array with a driving circuit for collecting the photoelectric signals are intensively focused on and the high performance analog-to-digital (A/D converter is comprehensively evaluated. The interface circuit and the photoelectric signal amplifier circuit are first studied to obtain the weak signals from the line CCD array in this experiment. Quantitative measurements for validating the sensitivity of the biosensing system were implemented using ethanol solutions of various concentrations indicated by volume fractions of 5%, 8%, 15%, 20%, 25%, and 30%, respectively, without a biomembrane immobilized on the surface of the SPR sensor. The experiments demonstrated that it is possible to detect a change in the refractive index of an ethanol solution with a sensitivity of 4.99838 × 105 ΔRU/RI in terms of the changes in delta response unit with refractive index using this SPR biosensing system, whereby the theoretical limit of detection of 3.3537 × 10−5 refractive index unit (RIU and a high linearity at the correlation coefficient of 0.98065. The results obtained from a series of tests confirmed the practicality of this cost-effective portable SPR biosensing system.

  19. Biosensing Using Magnetic Particle Detection Techniques

    Directory of Open Access Journals (Sweden)

    Yi-Ting Chen

    2017-10-01

    Full Text Available Magnetic particles are widely used as signal labels in a variety of biological sensing applications, such as molecular detection and related strategies that rely on ligand-receptor binding. In this review, we explore the fundamental concepts involved in designing magnetic particles for biosensing applications and the techniques used to detect them. First, we briefly describe the magnetic properties that are important for bio-sensing applications and highlight the associated key parameters (such as the starting materials, size, functionalization methods, and bio-conjugation strategies. Subsequently, we focus on magnetic sensing applications that utilize several types of magnetic detection techniques: spintronic sensors, nuclear magnetic resonance (NMR sensors, superconducting quantum interference devices (SQUIDs, sensors based on the atomic magnetometer (AM, and others. From the studies reported, we note that the size of the MPs is one of the most important factors in choosing a sensing technique.

  20. Computational multispectral video imaging [Invited].

    Science.gov (United States)

    Wang, Peng; Menon, Rajesh

    2018-01-01

    Multispectral imagers reveal information unperceivable to humans and conventional cameras. Here, we demonstrate a compact single-shot multispectral video-imaging camera by placing a micro-structured diffractive filter in close proximity to the image sensor. The diffractive filter converts spectral information to a spatial code on the sensor pixels. Following a calibration step, this code can be inverted via regularization-based linear algebra to compute the multispectral image. We experimentally demonstrated spectral resolution of 9.6 nm within the visible band (430-718 nm). We further show that the spatial resolution is enhanced by over 30% compared with the case without the diffractive filter. We also demonstrate Vis-IR imaging with the same sensor. Because no absorptive color filters are utilized, sensitivity is preserved as well. Finally, the diffractive filters can be easily manufactured using optical lithography and replication techniques.

  1. Homogeneous Biosensing Based on Magnetic Particle Labels

    KAUST Repository

    Schrittwieser, Stefan

    2016-06-06

    The growing availability of biomarker panels for molecular diagnostics is leading to an increasing need for fast and sensitive biosensing technologies that are applicable to point-of-care testing. In that regard, homogeneous measurement principles are especially relevant as they usually do not require extensive sample preparation procedures, thus reducing the total analysis time and maximizing ease-of-use. In this review, we focus on homogeneous biosensors for the in vitro detection of biomarkers. Within this broad range of biosensors, we concentrate on methods that apply magnetic particle labels. The advantage of such methods lies in the added possibility to manipulate the particle labels by applied magnetic fields, which can be exploited, for example, to decrease incubation times or to enhance the signal-to-noise-ratio of the measurement signal by applying frequency-selective detection. In our review, we discriminate the corresponding methods based on the nature of the acquired measurement signal, which can either be based on magnetic or optical detection. The underlying measurement principles of the different techniques are discussed, and biosensing examples for all techniques are reported, thereby demonstrating the broad applicability of homogeneous in vitro biosensing based on magnetic particle label actuation.

  2. Homogeneous Biosensing Based on Magnetic Particle Labels

    Science.gov (United States)

    Schrittwieser, Stefan; Pelaz, Beatriz; Parak, Wolfgang J.; Lentijo-Mozo, Sergio; Soulantica, Katerina; Dieckhoff, Jan; Ludwig, Frank; Guenther, Annegret; Tschöpe, Andreas; Schotter, Joerg

    2016-01-01

    The growing availability of biomarker panels for molecular diagnostics is leading to an increasing need for fast and sensitive biosensing technologies that are applicable to point-of-care testing. In that regard, homogeneous measurement principles are especially relevant as they usually do not require extensive sample preparation procedures, thus reducing the total analysis time and maximizing ease-of-use. In this review, we focus on homogeneous biosensors for the in vitro detection of biomarkers. Within this broad range of biosensors, we concentrate on methods that apply magnetic particle labels. The advantage of such methods lies in the added possibility to manipulate the particle labels by applied magnetic fields, which can be exploited, for example, to decrease incubation times or to enhance the signal-to-noise-ratio of the measurement signal by applying frequency-selective detection. In our review, we discriminate the corresponding methods based on the nature of the acquired measurement signal, which can either be based on magnetic or optical detection. The underlying measurement principles of the different techniques are discussed, and biosensing examples for all techniques are reported, thereby demonstrating the broad applicability of homogeneous in vitro biosensing based on magnetic particle label actuation. PMID:27275824

  3. Homogeneous Biosensing Based on Magnetic Particle Labels

    KAUST Repository

    Schrittwieser, Stefan; Pelaz, Beatriz; Parak, Wolfgang; Lentijo Mozo, Sergio; Soulantica, Katerina; Dieckhoff, Jan; Ludwig, Frank; Guenther, Annegret; Tschö pe, Andreas; Schotter, Joerg

    2016-01-01

    The growing availability of biomarker panels for molecular diagnostics is leading to an increasing need for fast and sensitive biosensing technologies that are applicable to point-of-care testing. In that regard, homogeneous measurement principles are especially relevant as they usually do not require extensive sample preparation procedures, thus reducing the total analysis time and maximizing ease-of-use. In this review, we focus on homogeneous biosensors for the in vitro detection of biomarkers. Within this broad range of biosensors, we concentrate on methods that apply magnetic particle labels. The advantage of such methods lies in the added possibility to manipulate the particle labels by applied magnetic fields, which can be exploited, for example, to decrease incubation times or to enhance the signal-to-noise-ratio of the measurement signal by applying frequency-selective detection. In our review, we discriminate the corresponding methods based on the nature of the acquired measurement signal, which can either be based on magnetic or optical detection. The underlying measurement principles of the different techniques are discussed, and biosensing examples for all techniques are reported, thereby demonstrating the broad applicability of homogeneous in vitro biosensing based on magnetic particle label actuation.

  4. Multispectral histogram normalization contrast enhancement

    Science.gov (United States)

    Soha, J. M.; Schwartz, A. A.

    1979-01-01

    A multispectral histogram normalization or decorrelation enhancement which achieves effective color composites by removing interband correlation is described. The enhancement procedure employs either linear or nonlinear transformations to equalize principal component variances. An additional rotation to any set of orthogonal coordinates is thus possible, while full histogram utilization is maintained by avoiding the reintroduction of correlation. For the three-dimensional case, the enhancement procedure may be implemented with a lookup table. An application of the enhancement to Landsat multispectral scanning imagery is presented.

  5. Multispectral Landsat images of Antartica

    Energy Technology Data Exchange (ETDEWEB)

    Lucchitta, B.K.; Bowell, J.A.; Edwards, K.L.; Eliason, E.M.; Fergurson, H.M.

    1988-01-01

    The U.S. Geological Survey has a program to map Antarctica by using colored, digitally enhanced Landsat multispectral scanner images to increase existing map coverage and to improve upon previously published Landsat maps. This report is a compilation of images and image mosaic that covers four complete and two partial 1:250,000-scale quadrangles of the McMurdo Sound region.

  6. Monitoring temporal microstructural variations of skeletal muscle tissues by multispectral Mueller matrix polarimetry

    Science.gov (United States)

    Dong, Yang; He, Honghui; He, Chao; Ma, Hui

    2017-02-01

    Mueller matrix polarimetry is a powerful tool for detecting microscopic structures, therefore can be used to monitor physiological changes of tissue samples. Meanwhile, spectral features of scattered light can also provide abundant microstructural information of tissues. In this paper, we take the 2D multispectral backscattering Mueller matrix images of bovine skeletal muscle tissues, and analyze their temporal variation behavior using multispectral Mueller matrix parameters. The 2D images of the Mueller matrix elements are reduced to the multispectral frequency distribution histograms (mFDHs) to reveal the dominant structural features of the muscle samples more clearly. For quantitative analysis, the multispectral Mueller matrix transformation (MMT) parameters are calculated to characterize the microstructural variations during the rigor mortis and proteolysis processes of the skeletal muscle tissue samples. The experimental results indicate that the multispectral MMT parameters can be used to judge different physiological stages for bovine skeletal muscle tissues in 24 hours, and combining with the multispectral technique, the Mueller matrix polarimetry and FDH analysis can monitor the microstructural variation features of skeletal muscle samples. The techniques may be used for quick assessment and quantitative monitoring of meat qualities in food industry.

  7. Multispectral biometrics systems and applications

    CERN Document Server

    Zhang, David; Gong, Yazhuo

    2016-01-01

    Describing several new biometric technologies, such as high-resolution fingerprint, finger-knuckle-print, multi-spectral backhand, 3D fingerprint, tongueprint, 3D ear, and multi-spectral iris recognition technologies, this book analyzes a number of efficient feature extraction, matching and fusion algorithms and how potential systems have been developed. Focusing on how to develop new biometric technologies based on the requirements of applications, and how to design efficient algorithms to deliver better performance, the work is based on the author’s research with experimental results under different challenging conditions described in the text. The book offers a valuable resource for researchers, professionals and postgraduate students working in the fields of computer vision, pattern recognition, biometrics, and security applications, amongst others.

  8. Multispectral recordings and analysis of psoriasis lesions

    DEFF Research Database (Denmark)

    Clemmensen, Line Katrine Harder; Ersbøll, Bjarne Kjær

    2006-01-01

    An objective method to evaluate the severeness of psoriasis lesions is proposed. In order to obtain objectivity multi-spectral imaging is used. The multi-spectral images give rise to a large p, small n problem which is solved by use of elastic net model selection. The method is promising for furt......An objective method to evaluate the severeness of psoriasis lesions is proposed. In order to obtain objectivity multi-spectral imaging is used. The multi-spectral images give rise to a large p, small n problem which is solved by use of elastic net model selection. The method is promising...

  9. Multispectral Panoramic Imaging System, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — International Electronic Machines Corporation, a leader in the design of precision imaging systems, will develop an innovative multispectral, panoramic imaging...

  10. Nanostructure materials for biosensing and bioimaging applications

    Science.gov (United States)

    Law, Wing Cheung

    In the first part of the thesis our work on a surface plasmon resonance (SPR) biosensor will be presented. It will begin with understanding the working principle of SPR sensing technology and the basic concept of SPR biosensing. In SPR technology, there are different coupling schemes to excite surface plasmons such as prism coupler, grating coupler and waveguide coupler. Our setup will be based on the attenuated total reflection (ATR) prism coupling configuration. A gold sensing film is attached to one face of the prism. The samples are flowing over the gold surface and the light source is directed to the prism side. The reflected beam containing SPR information is collected and analyzed. SPR biosensors have become powerful tools in biological and chemical sensing application because of their capability of real-time monitoring and label-free sensing. Quantitative measurements such as the binding kinetics and the binding affinity between two biomolecules can be readily calculated from the SPR sensorgram. In our design, SPR phase will be monitored using photoelastic modulation (PEM) technique. The PEM is used to produce a modulation signal so that the phase quantity can be extracted by measuring the relative amplitudes of the harmonic signals. Since this system contains no moving component and only single beam and single detector are used, precise component alignment, which may be troublesome in making the setup compact and robust, can be eliminated. In order to demonstrate the operation of the proposed approach, two experiments were performed. The first one was to measure the refractive index change caused by varying the concentration of glycerin-water mixtures. The second one was to monitor the binding reactions between biotin and streptavidin--BSA complex at the sensor surface. Recently, the use of metallic nanoparticle on SPR platform has received great attention due to the capability of sensitivity enhancement. Although the mechanism of the enhancement is still

  11. Microcantilever-based platforms as biosensing tools.

    Science.gov (United States)

    Alvarez, Mar; Lechuga, Laura M

    2010-05-01

    The fast and progressive growth of the biotechnology and pharmaceutical fields forces the development of new and powerful sensing techniques for process optimization and detection of biomolecules at very low concentrations. During the last years, the simplest MEMS structures, i.e. microcantilevers, have become an emerging and promising technology for biosensing applications, due to their small size, fast response, high sensitivity and their compatible integration into "lab-on-a-chip" devices. This article provides an overview of some of the most interesting bio-detections carried out during the last 2-3 years with the microcantilever-based platforms, which highlight the continuous expansion of this kind of sensor in the medical diagnosis field, reaching limits of detection at the single molecule level.

  12. Microneedle arrays for biosensing and drug delivery

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Joseph; Windmiller, Joshua Ray; Narayan, Roger; Miller, Philip

    2017-08-29

    Methods, structures, and systems are disclosed for biosensing and drug delivery techniques. In one aspect, a device for detecting an analyte and/or releasing a biochemical into a biological fluid can include an array of hollowed needles, in which each needle includes a protruded needle structure including an exterior wall forming a hollow interior and an opening at a terminal end of the protruded needle structure that exposes the hollow interior, and a probe inside the exterior wall to interact with one or more chemical or biological substances that come in contact with the probe via the opening to produce a probe sensing signal, and an array of wires that are coupled to probes of the array of hollowed needles, respectively, each wire being electrically conductive to transmit the probe sensing signal produced by a respective probe.

  13. Microneedle arrays for biosensing and drug delivery

    Science.gov (United States)

    Wang, Joseph; Windmiller, Joshua Ray; Narayan, Roger; Miller, Philip; Polsky, Ronen; Edwards, Thayne L.

    2017-08-22

    Methods, structures, and systems are disclosed for biosensing and drug delivery techniques. In one aspect, a^ device for detecting an analyte and/or releasing a biochemical into a biological fluid can include an array of hollowed needles, in which each needle includes a protruded needle structure including an exterior wall forming a hollow interior and an opening at a terminal end of the protruded needle structure that exposes the hollow interior, and a probe inside the exterior wall to interact with one or more chemical or biological substances that come in contact with the probe via the opening to produce a probe sensing signal, and an array of wires that are coupled to probes of the array of hollowed needles, respectively, each wire being electrically conductive to transmit the probe sensing signal produced by a respective probe.

  14. Multispectral colormapping using penalized least square regression

    DEFF Research Database (Denmark)

    Dissing, Bjørn Skovlund; Carstensen, Jens Michael; Larsen, Rasmus

    2010-01-01

    The authors propose a novel method to map a multispectral image into the device independent color space CIE-XYZ. This method provides a way to visualize multispectral images by predicting colorvalues from spectral values while maintaining interpretability and is tested on a light emitting diode...... that the interpretability improves significantly but comes at the cost of slightly worse predictability....

  15. Multispectral imaging of wok fried vegetables

    DEFF Research Database (Denmark)

    Løje, Hanne; Dissing, Bjørn Skovlund; Clemmensen, Line Katrine Harder

    2011-01-01

    This paper shows how multispectral images can be used to assess color change over time in wok fried vegetables. We present results where feature selection was performed with sparse methods from the multispectral images to detect the color changes of wok fried carrots and celeriac stored at +5°C...

  16. Multi Texture Analysis of Colorectal Cancer Continuum Using Multispectral Imagery.

    Directory of Open Access Journals (Sweden)

    Ahmad Chaddad

    Full Text Available This paper proposes to characterize the continuum of colorectal cancer (CRC using multiple texture features extracted from multispectral optical microscopy images. Three types of pathological tissues (PT are considered: benign hyperplasia, intraepithelial neoplasia and carcinoma.In the proposed approach, the region of interest containing PT is first extracted from multispectral images using active contour segmentation. This region is then encoded using texture features based on the Laplacian-of-Gaussian (LoG filter, discrete wavelets (DW and gray level co-occurrence matrices (GLCM. To assess the significance of textural differences between PT types, a statistical analysis based on the Kruskal-Wallis test is performed. The usefulness of texture features is then evaluated quantitatively in terms of their ability to predict PT types using various classifier models.Preliminary results show significant texture differences between PT types, for all texture features (p-value < 0.01. Individually, GLCM texture features outperform LoG and DW features in terms of PT type prediction. However, a higher performance can be achieved by combining all texture features, resulting in a mean classification accuracy of 98.92%, sensitivity of 98.12%, and specificity of 99.67%.These results demonstrate the efficiency and effectiveness of combining multiple texture features for characterizing the continuum of CRC and discriminating between pathological tissues in multispectral images.

  17. CLASSIFICATION BY USING MULTISPECTRAL POINT CLOUD DATA

    Directory of Open Access Journals (Sweden)

    C. T. Liao

    2012-07-01

    Full Text Available Remote sensing images are generally recorded in two-dimensional format containing multispectral information. Also, the semantic information is clearly visualized, which ground features can be better recognized and classified via supervised or unsupervised classification methods easily. Nevertheless, the shortcomings of multispectral images are highly depending on light conditions, and classification results lack of three-dimensional semantic information. On the other hand, LiDAR has become a main technology for acquiring high accuracy point cloud data. The advantages of LiDAR are high data acquisition rate, independent of light conditions and can directly produce three-dimensional coordinates. However, comparing with multispectral images, the disadvantage is multispectral information shortage, which remains a challenge in ground feature classification through massive point cloud data. Consequently, by combining the advantages of both LiDAR and multispectral images, point cloud data with three-dimensional coordinates and multispectral information can produce a integrate solution for point cloud classification. Therefore, this research acquires visible light and near infrared images, via close range photogrammetry, by matching images automatically through free online service for multispectral point cloud generation. Then, one can use three-dimensional affine coordinate transformation to compare the data increment. At last, the given threshold of height and color information is set as threshold in classification.

  18. Classification by Using Multispectral Point Cloud Data

    Science.gov (United States)

    Liao, C. T.; Huang, H. H.

    2012-07-01

    Remote sensing images are generally recorded in two-dimensional format containing multispectral information. Also, the semantic information is clearly visualized, which ground features can be better recognized and classified via supervised or unsupervised classification methods easily. Nevertheless, the shortcomings of multispectral images are highly depending on light conditions, and classification results lack of three-dimensional semantic information. On the other hand, LiDAR has become a main technology for acquiring high accuracy point cloud data. The advantages of LiDAR are high data acquisition rate, independent of light conditions and can directly produce three-dimensional coordinates. However, comparing with multispectral images, the disadvantage is multispectral information shortage, which remains a challenge in ground feature classification through massive point cloud data. Consequently, by combining the advantages of both LiDAR and multispectral images, point cloud data with three-dimensional coordinates and multispectral information can produce a integrate solution for point cloud classification. Therefore, this research acquires visible light and near infrared images, via close range photogrammetry, by matching images automatically through free online service for multispectral point cloud generation. Then, one can use three-dimensional affine coordinate transformation to compare the data increment. At last, the given threshold of height and color information is set as threshold in classification.

  19. Plasmonic interferometers: From physics to biosensing applications

    Science.gov (United States)

    Zeng, Xie

    Optical interferometry has a long history and wide range of applications. In recent years, plasmonic interferometer arouses great interest due to its compact size and enhanced light-matter interaction. They have demonstrated attractive applications in biomolecule sensing, optical modulation/switching, and material characterization, etc. In this work, we first propose a practical far-field method to extract the intrinsic phase dispersion, revealing important phase information during interactions among free-space light, nanostructure, and SPs. The proposed approach is confirmed by both simulation and experiment. Then we design novel plasmonic interferometer structure for sensitive optical sensing applications. To overcome two major limitations suffered by previously reported double-slit plasmonic Mach-Zehnder interferometer (PMZI), two new schemes are proposed and investigated. (1) A PMZI based on end-fire coupling improves the SP coupling efficiency and enhance the interference contrast more than 50 times. (2) In another design, a multi-layered metal-insulator-metal PMZI releases the requirement for single-slit illumination, which enables sensitive, high-throughput sensing applications based on intensity modulation. We develop a sensitive, low-cost and high-throughput biosensing platform based on intensity modulation using ring-hole plasmonic interferometers. This biosensor is then integrated with cell-phone-based microscope, which is promising to develop a portable sensor for point-of-care diagnostics, epidemic disease control and food safety monitoring.

  20. Corrosion resistant metallic glasses for biosensing applications

    Science.gov (United States)

    Sagasti, Ariane; Lopes, Ana Catarina; Lasheras, Andoni; Palomares, Verónica; Carrizo, Javier; Gutierrez, Jon; Barandiaran, J. Manuel

    2018-04-01

    We report the fabrication by melt spinning, the magnetic and magnetoelastic characterization and corrosion behaviour study (by potentiodynamic methods) of an Fe-based, Fe-Ni-Cr-Si-B metallic glass to be used as resonant platform for biological and chemical detection purposes. The same study has been performed in Fe-Co-Si-B (with excellent magnetoelastic properties) and Fe-Ni-B (with good corrosion properties due to the substitution of Co by Ni) composition amorphous alloys. The well-known, commercial metallic glass with high corrosion resistance Metglas 2826MB®(Fe40Ni38Mo4B18), widely used for such biological and chemical detection purposes, has been also fully characterized and used as reference. For our Fe-Ni-Cr-Si-B alloy, we have measured values of magnetization (1.22 T), magnetostriction (11.5 ppm) and ΔE effect (6.8 %) values, as well as corrosion potential (-0.25 V), current density (2.54 A/m2), and polarization resistance (56.22 Ω.cm2) that make this composition very promising for the desired biosensing applications. The obtained parameters from our exhaustive characterization are compared with the values obtained for the other different composition metallic glasses and discussed in terms of Ni and Cr content.

  1. Micro-incubator for bacterial biosensing applications

    Science.gov (United States)

    Clasen, Estine; Land, Kevin; Joubert, Trudi-Heleen

    2016-02-01

    The presence of Escherichia coli (E. coli ) is a commonly used indicator micro-organism to determine whether water is safe for human consumption.1 This paper discusses the design of a micro-incubator that can be applied to concentrate bacteria prior to environmental water quality screening tests. High sensitivity and rapid test time is essential and there is a great need for these tests to be implemented on-site without the use of a laboratory infrastructure. In the light of these requirements, a mobile micro-incubator was designed, manufactured and characterised. A polydimethylsiloxane (PDMS) receptacle has been designed to house the 1-5 ml cell culture sample.2 A nano-silver printed electronics micro-heater has been designed to incubate the bacterial sample, with an array of temperature sensors implemented to accurately measure the sample temperature at various locations in the cell culture well. The micro-incubator limits the incubation temperature range to 37+/-3 °C in order to ensure near optimal growth of the bacteria at all times.3 The incubation time is adjustable between 30 minutes and 9 hours with a maximum rise time of 15 minutes to reach the set-point temperature. The surface area of the printed nano silver heating element is 500 mm2. Electrical and COMSOL Multiphysics simulations are included in order to give insight on micro-incubator temperature control. The design and characterization of this micro-incubator allows for further research in biosensing applications.

  2. Corrosion resistant metallic glasses for biosensing applications

    Directory of Open Access Journals (Sweden)

    Ariane Sagasti

    2018-04-01

    Full Text Available We report the fabrication by melt spinning, the magnetic and magnetoelastic characterization and corrosion behaviour study (by potentiodynamic methods of an Fe-based, Fe-Ni-Cr-Si-B metallic glass to be used as resonant platform for biological and chemical detection purposes. The same study has been performed in Fe-Co-Si-B (with excellent magnetoelastic properties and Fe-Ni-B (with good corrosion properties due to the substitution of Co by Ni composition amorphous alloys. The well-known, commercial metallic glass with high corrosion resistance Metglas 2826MB®(Fe40Ni38Mo4B18, widely used for such biological and chemical detection purposes, has been also fully characterized and used as reference. For our Fe-Ni-Cr-Si-B alloy, we have measured values of magnetization (1.22 T, magnetostriction (11.5 ppm and ΔE effect (6.8 % values, as well as corrosion potential (-0.25 V, current density (2.54 A/m2, and polarization resistance (56.22 Ω.cm2 that make this composition very promising for the desired biosensing applications. The obtained parameters from our exhaustive characterization are compared with the values obtained for the other different composition metallic glasses and discussed in terms of Ni and Cr content.

  3. Electrochemical biosensing based on polypyrrole/titania nanotube hybrid

    Energy Technology Data Exchange (ETDEWEB)

    Xie, Yibing, E-mail: ybxie@seu.edu.cn; Zhao, Ye

    2013-12-01

    The glucose oxidase (GOD) modified polypyrrole/titania nanotube enzyme electrode is fabricated for electrochemical biosensing application. The titania nanotube array is grown directly on a titanium substrate through an anodic oxidation process. A thin film of polypyrrole is coated onto titania nanotube array to form polypyrrole/titania nanotube hybrid through a normal pulse voltammetry process. GOD-polypyrrole/titania nanotube enzyme electrode is prepared by the covalent immobilization of GOD onto polypyrrole/titania nanotube hybrid via the cross-linker of glutaraldehyde. The morphology and microstructure of nanotube electrodes are characterized by field emission scanning electron microscopy and Fourier transform infrared analysis. The biosensing properties of this nanotube enzyme electrode have been investigated by means of cyclic voltammetry and chronoamperometry. The hydrophilic polypyrrole/titania nanotube hybrid provides highly accessible nanochannels for GOD encapsulation, presenting good enzymatic affinity. As-formed GOD-polypyrrole/titania nanotube enzyme electrode well conducts bioelectrocatalytic oxidation of glucose, exhibiting a good biosensing performance with a high sensitivity, low detection limit and wide linear detection range. - Graphical abstract: The schematic diagram presents the fabrication of glucose oxidase modified polypyrrole/titania (GOD-PPy/TiO{sub 2}) nanotube enzyme electrode for biosensing application. - Highlights: • Hydrophilic polypyrrole/titania nanotube hybrid is well used as biosensing substrate. • Polypyrrole promotes GOD immobilization on titania nanotubes via glutaraldehyde. • GOD-polypyrrole/titania enzyme electrode shows good bioelectrocatalytic reactivity.

  4. Electrochemical biosensing based on polypyrrole/titania nanotube hybrid

    International Nuclear Information System (INIS)

    Xie, Yibing; Zhao, Ye

    2013-01-01

    The glucose oxidase (GOD) modified polypyrrole/titania nanotube enzyme electrode is fabricated for electrochemical biosensing application. The titania nanotube array is grown directly on a titanium substrate through an anodic oxidation process. A thin film of polypyrrole is coated onto titania nanotube array to form polypyrrole/titania nanotube hybrid through a normal pulse voltammetry process. GOD-polypyrrole/titania nanotube enzyme electrode is prepared by the covalent immobilization of GOD onto polypyrrole/titania nanotube hybrid via the cross-linker of glutaraldehyde. The morphology and microstructure of nanotube electrodes are characterized by field emission scanning electron microscopy and Fourier transform infrared analysis. The biosensing properties of this nanotube enzyme electrode have been investigated by means of cyclic voltammetry and chronoamperometry. The hydrophilic polypyrrole/titania nanotube hybrid provides highly accessible nanochannels for GOD encapsulation, presenting good enzymatic affinity. As-formed GOD-polypyrrole/titania nanotube enzyme electrode well conducts bioelectrocatalytic oxidation of glucose, exhibiting a good biosensing performance with a high sensitivity, low detection limit and wide linear detection range. - Graphical abstract: The schematic diagram presents the fabrication of glucose oxidase modified polypyrrole/titania (GOD-PPy/TiO 2 ) nanotube enzyme electrode for biosensing application. - Highlights: • Hydrophilic polypyrrole/titania nanotube hybrid is well used as biosensing substrate. • Polypyrrole promotes GOD immobilization on titania nanotubes via glutaraldehyde. • GOD-polypyrrole/titania enzyme electrode shows good bioelectrocatalytic reactivity

  5. MEMS-Based Power Generation Techniques for Implantable Biosensing Applications

    Directory of Open Access Journals (Sweden)

    Jonathan Lueke

    2011-01-01

    Full Text Available Implantable biosensing is attractive for both medical monitoring and diagnostic applications. It is possible to monitor phenomena such as physical loads on joints or implants, vital signs, or osseointegration in vivo and in real time. Microelectromechanical (MEMS-based generation techniques can allow for the autonomous operation of implantable biosensors by generating electrical power to replace or supplement existing battery-based power systems. By supplementing existing battery-based power systems for implantable biosensors, the operational lifetime of the sensor is increased. In addition, the potential for a greater amount of available power allows additional components to be added to the biosensing module, such as computational and wireless and components, improving functionality and performance of the biosensor. Photovoltaic, thermovoltaic, micro fuel cell, electrostatic, electromagnetic, and piezoelectric based generation schemes are evaluated in this paper for applicability for implantable biosensing. MEMS-based generation techniques that harvest ambient energy, such as vibration, are much better suited for implantable biosensing applications than fuel-based approaches, producing up to milliwatts of electrical power. High power density MEMS-based approaches, such as piezoelectric and electromagnetic schemes, allow for supplemental and replacement power schemes for biosensing applications to improve device capabilities and performance. In addition, this may allow for the biosensor to be further miniaturized, reducing the need for relatively large batteries with respect to device size. This would cause the implanted biosensor to be less invasive, increasing the quality of care received by the patient.

  6. MEMS-based power generation techniques for implantable biosensing applications.

    Science.gov (United States)

    Lueke, Jonathan; Moussa, Walied A

    2011-01-01

    Implantable biosensing is attractive for both medical monitoring and diagnostic applications. It is possible to monitor phenomena such as physical loads on joints or implants, vital signs, or osseointegration in vivo and in real time. Microelectromechanical (MEMS)-based generation techniques can allow for the autonomous operation of implantable biosensors by generating electrical power to replace or supplement existing battery-based power systems. By supplementing existing battery-based power systems for implantable biosensors, the operational lifetime of the sensor is increased. In addition, the potential for a greater amount of available power allows additional components to be added to the biosensing module, such as computational and wireless and components, improving functionality and performance of the biosensor. Photovoltaic, thermovoltaic, micro fuel cell, electrostatic, electromagnetic, and piezoelectric based generation schemes are evaluated in this paper for applicability for implantable biosensing. MEMS-based generation techniques that harvest ambient energy, such as vibration, are much better suited for implantable biosensing applications than fuel-based approaches, producing up to milliwatts of electrical power. High power density MEMS-based approaches, such as piezoelectric and electromagnetic schemes, allow for supplemental and replacement power schemes for biosensing applications to improve device capabilities and performance. In addition, this may allow for the biosensor to be further miniaturized, reducing the need for relatively large batteries with respect to device size. This would cause the implanted biosensor to be less invasive, increasing the quality of care received by the patient.

  7. SERS substrates for in-situ biosensing (Conference Presentation)

    Science.gov (United States)

    Venugopalan, Priyamvada; Quilis, Nestor; Jakub, Dostalek; Wolfgang, Knoll

    2017-06-01

    Abstract: Recent years have seen a rapid progress in the field of surface-enhanced Raman spectroscopy (SERS) which is attributed to the thriving field of plasmonics [1]. SERS is a susceptible technique that can address basic scientific questions and technological problems. In both cases, it is highly dependent upon the plasmonic substrate, where excitation of the localized surface plasmon resonance enhances the vibrational scattering signal of the analyte molecules adsorbed on to the surface [2]. In this work, using finite difference time domain (FDTD) method we investigate the optical properties of plasmonic nanostructures with tuned plasmonic resonances as a function of dielectric environment and geometric parameters. An optimized geometry will be discussed based on the plasmonic resonant position and the SERS intensity. These SERS substrates will be employed for the detection of changes in conformation caused by interactions between an aptamer and analyte molecules. This will be done by using a microfluidic channel designed within the configuration of the lab-on-a-chip concept based on the intensity changes of the SERS signal. More efficient and reproducible results are obtained for such a quantitative measurement of analytes at low concentration levels. We will also demonstrate that the plasmonic substrates fabricated by top down approach such as e-beam lithography (EBL) and laser interference lithography (LIL) are highly reproducible, robust and can result in high electric field enhancement. Our results demonstrate the potential to use SERS substrates for highly sensitive detection schemes opening up the window for a wide range of applications including biomedical diagnostics, forensic investigation etc. Acknowledgement: This work was supported by the Austrian Science Fund (FWF), project NANOBIOSENSOR (I 2647). References: [1] J. N. Anker, W. P. Hall, O. Lyandres, N. C. Shah, J. Zhao and R. P. V. Duyne., " Biosensing with plasmonic nanosensors," Nature

  8. Carbon Nanostructures for Tagging in Electrochemical Biosensing: A Review

    Directory of Open Access Journals (Sweden)

    Paloma Yáñez-Sedeño

    2017-01-01

    Full Text Available Growing demand for developing ultrasensitive electrochemical bioassays has led to the design of numerous signal amplification strategies. In this context, carbon-based nanomaterials have been demonstrated to be excellent tags for greatly amplifying the transduction of recognition events and simplifying the protocols used in electrochemical biosensing. This relevant role is due to the carbon-nanomaterials’ large surface area, excellent biological compatibility and ease functionalization and, in some cases, intrinsic electrochemistry. These carbon-based nanomaterials involve well-known carbon nanotubes (CNTs and graphene as well as the more recent use of other carbon nanoforms. This paper briefly discusses the advantages of using carbon nanostructures and their hybrid nanocomposites for amplification through tagging in electrochemical biosensing platforms and provides an updated overview of some selected examples making use of labels involving carbon nanomaterials, acting both as carriers for signal elements and as electrochemical tracers, applied to the electrochemical biosensing of relevant (biomarkers.

  9. Phase sensitive spectral domain interferometry for label free biomolecular interaction analysis and biosensing applications

    Science.gov (United States)

    Chirvi, Sajal

    -channel label-free biosensing applications is introduced. Simultaneous interrogation of multiple biosensors is achievable with a single spectral domain phase sensitive interferometer by coding the individual sensograms in coherence-multiplexed channels. Experimental results demonstrating multiplexed quantitative biomolecular interaction analysis of antibodies binding to antigen coated functionalized biosensor chip surfaces on different platforms are presented.

  10. Multispectral Palmprint Recognition Using a Quaternion Matrix

    Directory of Open Access Journals (Sweden)

    Yafeng Li

    2012-04-01

    Full Text Available Palmprints have been widely studied for biometric recognition for many years. Traditionally, a white light source is used for illumination. Recently, multispectral imaging has drawn attention because of its high recognition accuracy. Multispectral palmprint systems can provide more discriminant information under different illuminations in a short time, thus they can achieve better recognition accuracy. Previously, multispectral palmprint images were taken as a kind of multi-modal biometrics, and the fusion scheme on the image level or matching score level was used. However, some spectral information will be lost during image level or matching score level fusion. In this study, we propose a new method for multispectral images based on a quaternion model which could fully utilize the multispectral information. Firstly, multispectral palmprint images captured under red, green, blue and near-infrared (NIR illuminations were represented by a quaternion matrix, then principal component analysis (PCA and discrete wavelet transform (DWT were applied respectively on the matrix to extract palmprint features. After that, Euclidean distance was used to measure the dissimilarity between different features. Finally, the sum of two distances and the nearest neighborhood classifier were employed for recognition decision. Experimental results showed that using the quaternion matrix can achieve a higher recognition rate. Given 3000 test samples from 500 palms, the recognition rate can be as high as 98.83%.

  11. Cerium phosphate nanotubes: synthesis, characterization and biosensing

    Science.gov (United States)

    Meng, Ling; Yang, Lige; Zhou, Bo; Cai, Chenxin

    2009-01-01

    Cerium phosphate (CeP) nanotubes have been synthesized and confirmed by x-ray diffraction (XRD) and transmission electron microscopy (TEM). The 1D nanomaterial has a monoclinic crystal structure with a mean width of 15-20 nm and a length up to several micrometers. The nanotubes have been employed as electrode substrates for immobilization and direct electrochemistry of heme proteins/enzymes with myoglobin (Mb) as a model. The electrochemical characteristics of the Mb-CeP/GC electrode were studied by voltammetry. After being immobilized on the nanotubes, Mb can keep its natural structure and undergo effective direct electron transfer reaction with a pair of well-defined redox peaks at -(367 ± 3) mV (pH 7.5). The apparent electron transfer rate constant is (9.1 ± 1.4) s-1. The electrode displays good features in the electrocatalytic reduction of H2O2, and thus can be used as a biosensor for detecting the substrate with a low detection limit (0.5 ± 0.05 µM), a wide linear range (0.01-2 mM), high sensitivity (14.4 ± 1.2 µA mM-1), as well as good stability and reproducibility. CeP nanotubes can become a simple and effective biosensing platform for the integration of heme proteins/enzymes and electrodes, which can provide analytical access to a large group of enzymes for a wide range of bioelectrochemical applications.

  12. Cerium phosphate nanotubes: synthesis, characterization and biosensing

    International Nuclear Information System (INIS)

    Meng Ling; Yang Lige; Zhou Bo; Cai Chenxin

    2009-01-01

    Cerium phosphate (CeP) nanotubes have been synthesized and confirmed by x-ray diffraction (XRD) and transmission electron microscopy (TEM). The 1D nanomaterial has a monoclinic crystal structure with a mean width of 15-20 nm and a length up to several micrometers. The nanotubes have been employed as electrode substrates for immobilization and direct electrochemistry of heme proteins/enzymes with myoglobin (Mb) as a model. The electrochemical characteristics of the Mb-CeP/GC electrode were studied by voltammetry. After being immobilized on the nanotubes, Mb can keep its natural structure and undergo effective direct electron transfer reaction with a pair of well-defined redox peaks at -(367 ± 3) mV (pH 7.5). The apparent electron transfer rate constant is (9.1 ± 1.4) s -1 . The electrode displays good features in the electrocatalytic reduction of H 2 O 2 , and thus can be used as a biosensor for detecting the substrate with a low detection limit (0.5 ± 0.05 μM), a wide linear range (0.01-2 mM), high sensitivity (14.4 ± 1.2 μA mM -1 ), as well as good stability and reproducibility. CeP nanotubes can become a simple and effective biosensing platform for the integration of heme proteins/enzymes and electrodes, which can provide analytical access to a large group of enzymes for a wide range of bioelectrochemical applications.

  13. Microneedles for Transdermal Biosensing: Current Picture and Future Direction.

    Science.gov (United States)

    Ventrelli, Letizia; Marsilio Strambini, Lucanos; Barillaro, Giuseppe

    2015-12-09

    A novel trend is rapidly emerging in the use of microneedles, which are a miniaturized replica of hypodermic needles with length-scales of hundreds of micrometers, aimed at the transdermal biosensing of analytes of clinical interest, e.g., glucose, biomarkers, and others. Transdermal biosensing via microneedles offers remarkable opportunities for moving biosensing technologies and biochips from research laboratories to real-field applications, and envisages easy-to-use point-of-care microdevices with pain-free, minimally invasive, and minimal-training features that are very attractive for both developed and emerging countries. In addition to this, microneedles for transdermal biosensing offer a unique possibility for the development of biochips provided with end-effectors for their interaction with the biological system under investigation. Direct and efficient collection of the biological sample to be analyzed will then become feasible in situ at the same length-scale of the other biochip components by minimally trained personnel and in a minimally invasive fashion. This would eliminate the need for blood extraction using hypodermic needles and reduce, in turn, related problems, such as patient infections, sample contaminations, analysis artifacts, etc. The aim here is to provide a thorough and critical analysis of state-of-the-art developments in this novel research trend, and to bridge the gap between microneedles and biosensors. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Impedance nanopore biosensor: influence of pore dimensions on biosensing performance.

    Science.gov (United States)

    Kant, Krishna; Yu, Jingxian; Priest, Craig; Shapter, Joe G; Losic, Dusan

    2014-03-07

    Knowledge about electrochemical and electrical properties of nanopore structures and the influence of pore dimensions on these properties is important for the development of nanopore biosensing devices. The aim of this study was to explore the influence of nanopore dimensions (diameter and length) on biosensing performance using non-faradic electrochemical impedance spectroscopy (EIS). Nanoporous alumina membranes (NPAMs) prepared by self-ordered electrochemical anodization of aluminium were used as model nanopore sensing platforms. NPAMs with different pore diameters (25-65 nm) and lengths (4-18 μm) were prepared and the internal pore surface chemistry was modified by covalently attaching streptavidin and biotin. The performance of this antibody nanopore biosensing platform was evaluated using various concentrations of biotin as a model analyte. EIS measurements of pore resistivity and conductivity were carried out for pores with different diameters and lengths. The results showed that smaller pore dimensions of 25 nm and pore lengths up to 10 μm provide better biosensing performance.

  15. GPC and quantitative phase imaging

    DEFF Research Database (Denmark)

    Palima, Darwin; Banas, Andrew Rafael; Villangca, Mark Jayson

    2016-01-01

    shaper followed by the potential of GPC for biomedical and multispectral applications where we experimentally demonstrate the active light shaping of a supercontinuum laser over most of the visible wavelength range. Finally, we discuss how GPC can be advantageously applied for Quantitative Phase Imaging...

  16. Multispectral analysis of multimodal images

    Energy Technology Data Exchange (ETDEWEB)

    Kvinnsland, Yngve; Brekke, Njaal (Dept. of Surgical Sciences, Univ. of Bergen, Bergen (Norway)); Taxt, Torfinn M.; Gruener, Renate (Dept. of Biomedicine, Univ. of Bergen, Bergen (Norway))

    2009-02-15

    An increasing number of multimodal images represent a valuable increase in available image information, but at the same time it complicates the extraction of diagnostic information across the images. Multispectral analysis (MSA) has the potential to simplify this problem substantially as unlimited number of images can be combined, and tissue properties across the images can be extracted automatically. Materials and methods. We have developed a software solution for MSA containing two algorithms for unsupervised classification, an EM-algorithm finding multinormal class descriptions and the k-means clustering algorithm, and two for supervised classification, a Bayesian classifier using multinormal class descriptions and a kNN-algorithm. The software has an efficient user interface for the creation and manipulation of class descriptions, and it has proper tools for displaying the results. Results. The software has been tested on different sets of images. One application is to segment cross-sectional images of brain tissue (T1- and T2-weighted MR images) into its main normal tissues and brain tumors. Another interesting set of images are the perfusion maps and diffusion maps, derived images from raw MR images. The software returns segmentation that seem to be sensible. Discussion. The MSA software appears to be a valuable tool for image analysis with multimodal images at hand. It readily gives a segmentation of image volumes that visually seems to be sensible. However, to really learn how to use MSA, it will be necessary to gain more insight into what tissues the different segments contain, and the upcoming work will therefore be focused on examining the tissues through for example histological sections.

  17. Online Multi-Spectral Meat Inspection

    DEFF Research Database (Denmark)

    Nielsen, Jannik Boll; Larsen, Anders Boesen Lindbo

    2013-01-01

    We perform an explorative study on multi-spectral image data from a prototype device developed for fast online quality inspection of meat products. Because the camera setup is built for speed, we sacrifice exact pixel correspondences between the different bands of the multi-spectral images. Our...... work is threefold as we 1) investigate the color distributions and construct a model to describe pork loins, 2) classify the different components in pork loins (meat, fat, membrane), and 3) detect foreign objects on the surface of pork loins. Our investigation shows that the color distributions can...

  18. Multispectral Imaging of Wok-Fried Vegetables

    DEFF Research Database (Denmark)

    Clemmensen, Line Katrine Harder; Dissing, Bjørn Skovlund; Hyldig, Grethe

    2012-01-01

    Quality control in the food industry is often performed by measuring various chemical compounds in the food involved. The authors propose an imaging concept for acquiring high-quality multispectral images to evaluate optical reflection changes in carrots and celeriac over a period of 14 days....... For comparison, sensory analysis was performed on the same samples. Prior to multispectral image recording, the vegetables were prefried and frozen at -30 °C for 4 months. During the 14 days of image recording, the vegetables were kept at +5 °C. In this period, surface changes and thereby reflectance properties...

  19. An operative quantitative analysis of multispectral images of the eyeground

    Science.gov (United States)

    Lisenko, S. A.; Kugeiko, M. M.; Firago, V. A.; Kubarko, A. I.

    2014-09-01

    In the approximation of a four-layer model of the eyeground, we have studied the information content of photographs of the eyeground obtained in different spectral intervals from the visible range of the spectrum. We have shown that, under conditions of a priori uncertainty of all parameters of the eyeground that affect spectral fluxes of light multiply scattered by the eyeground, the two-dimensional distributions of the following parameters can be determined: (i) the contents of hemoglobin and macular pigment in the retina; (ii) the contents of melanin in the pigment epithelium and choroid; (iii) the degree of blood oxygenation; and (iv) the structural parameter of the retina, which characterizes the volume concentration of its effective scatterers. Based on results of a numerical simulation of the light-transfer process in the medium under study, we have determined regression relationships between parameters of the eyeground and spectral characteristics of its image and have proposed a method for the operative retrieval of parameter maps of the eyeground, which uses the determined regressions.

  20. Precision Viticulture from Multitemporal, Multispectral Very High Resolution Satellite Data

    Science.gov (United States)

    Kandylakis, Z.; Karantzalos, K.

    2016-06-01

    In order to exploit efficiently very high resolution satellite multispectral data for precision agriculture applications, validated methodologies should be established which link the observed reflectance spectra with certain crop/plant/fruit biophysical and biochemical quality parameters. To this end, based on concurrent satellite and field campaigns during the veraison period, satellite and in-situ data were collected, along with several grape samples, at specific locations during the harvesting period. These data were collected for a period of three years in two viticultural areas in Northern Greece. After the required data pre-processing, canopy reflectance observations, through the combination of several vegetation indices were correlated with the quantitative results from the grape/must analysis of grape sampling. Results appear quite promising, indicating that certain key quality parameters (like brix levels, total phenolic content, brix to total acidity, anthocyanin levels) which describe the oenological potential, phenolic composition and chromatic characteristics can be efficiently estimated from the satellite data.

  1. Selective biosensing of Staphylococcus aureus using chitosan quantum dots

    Science.gov (United States)

    Abdelhamid, Hani Nasser; Wu, Hui-Fen

    2018-01-01

    Selective biosensing of Staphylococcus aureus (S. aureus) using chitosan modified quantum dots (CTS@CdS QDs) in the presence of hydrogen peroxide is reported. The method is based on the intrinsic positive catalase activity of S. aureus. CTS@CdS quantum dots provide high dispersion in aqueous media with high fluorescence emission. Staphylococcus aureus causes a selective quenching of the fluorescence emission of CTS@CdS QDs in the presence of H2O2 compared to other pathogens such as Escherichia coli and Pseudomonas aeruginosa. The intrinsic enzymatic character of S. aureus (catalase positive) offers selective and fast biosensing. The present method is highly selective for positive catalase species and requires no expensive reagents such as antibodies, aptamers or microbeads. It could be extended for other species that are positive catalase.

  2. Nucleic acid-functionalized transition metal nanosheets for biosensing applications.

    Science.gov (United States)

    Mo, Liuting; Li, Juan; Liu, Qiaoling; Qiu, Liping; Tan, Weihong

    2017-03-15

    In clinical diagnostics, as well as food and environmental safety practices, biosensors are powerful tools for monitoring biological or biochemical processes. Two-dimensional (2D) transition metal nanomaterials, including transition metal chalcogenides (TMCs) and transition metal oxides (TMOs), are receiving growing interest for their use in biosensing applications based on such unique properties as high surface area and fluorescence quenching abilities. Meanwhile, nucleic acid probes based on Watson-Crick base-pairing rules are also being widely applied in biosensing based on their excellent recognition capability. In particular, the emergence of functional nucleic acids in the 1980s, especially aptamers, has substantially extended the recognition capability of nucleic acids to various targets, ranging from small organic molecules and metal ions to proteins and cells. Based on π-π stacking interaction between transition metal nanosheets and nucleic acids, biosensing systems can be easily assembled. Therefore, the combination of 2D transition metal nanomaterials and nucleic acids brings intriguing opportunities in bioanalysis and biomedicine. In this review, we summarize recent advances of nucleic acid-functionalized transition metal nanosheets in biosensing applications. The structure and properties of 2D transition metal nanomaterials are first discussed, emphasizing the interaction between transition metal nanosheets and nucleic acids. Then, the applications of nucleic acid-functionalized transition metal nanosheet-based biosensors are discussed in the context of different signal transducing mechanisms, including optical and electrochemical approaches. Finally, we provide our perspectives on the current challenges and opportunities in this promising field. Copyright © 2016 Elsevier B.V. All rights reserved.

  3. PAN-SHARPENING APPROACHES BASED ON UNMIXING OF MULTISPECTRAL REMOTE SENSING IMAGERY

    Directory of Open Access Journals (Sweden)

    G. Palubinskas

    2016-06-01

    Full Text Available Model based analysis or explicit definition/listing of all models/assumptions used in the derivation of a pan-sharpening method allows us to understand the rationale or properties of existing methods and shows a way for a proper usage or proposal/selection of new methods ‘better’ satisfying the needs of a particular application. Most existing pan-sharpening methods are based mainly on the two models/assumptions: spectral consistency for high resolution multispectral data (physical relationship between multispectral and panchromatic data in a high resolution scale and spatial consistency for multispectral data (so-called Wald’s protocol first property or relationship between multispectral data in different resolution scales. Two methods, one based on a linear unmixing model and another one based on spatial unmixing, are described/proposed/modified which respect models assumed and thus can produce correct or physically justified fusion results. Earlier mentioned property ‘better’ should be measurable quantitatively, e.g. by means of so-called quality measures. The difficulty of a quality assessment task in multi-resolution image fusion or pan-sharpening is that a reference image is missing. Existing measures or so-called protocols are still not satisfactory because quite often the rationale or assumptions used are not valid or not fulfilled. From a model based view it follows naturally that a quality assessment measure can be defined as a combination of error model residuals using common or general models assumed in all fusion methods. Thus in this paper a comparison of the two earlier proposed/modified pan-sharpening methods is performed. Preliminary experiments based on visual analysis are carried out in the urban area of Munich city for optical remote sensing multispectral data and panchromatic imagery of the WorldView-2 satellite sensor.

  4. Airborne Multi-Spectral Minefield Survey

    Science.gov (United States)

    2005-05-01

    Swedish Defence Research Agency), GEOSPACE (Austria), GTD ( Ingenieria de Sistemas y Software Industrial, Spain), IMEC (Ineruniversity MicroElectronic...RTO-MP-SET-092 18 - 1 UNCLASSIFIED/UNLIMITED UNCLASSIFIED/UNLIMITED Airborne Multi-Spectral Minefield Survey Dirk-Jan de Lange, Eric den...actions is the severe lack of baseline information. To respond to this in a rapid way, cost-efficient data acquisition methods are a key issue. de

  5. Supervised Classification Performance of Multispectral Images

    OpenAIRE

    Perumal, K.; Bhaskaran, R.

    2010-01-01

    Nowadays government and private agencies use remote sensing imagery for a wide range of applications from military applications to farm development. The images may be a panchromatic, multispectral, hyperspectral or even ultraspectral of terra bytes. Remote sensing image classification is one amongst the most significant application worlds for remote sensing. A few number of image classification algorithms have proved good precision in classifying remote sensing data. But, of late, due to the ...

  6. A survey of classical methods and new trends in pansharpening of multispectral images

    Directory of Open Access Journals (Sweden)

    Katsaggelos Aggelos

    2011-01-01

    Full Text Available Abstract There exist a number of satellites on different earth observation platforms, which provide multispectral images together with a panchromatic image, that is, an image containing reflectance data representative of a wide range of bands and wavelengths. Pansharpening is a pixel-level fusion technique used to increase the spatial resolution of the multispectral image while simultaneously preserving its spectral information. In this paper, we provide a review of the pan-sharpening methods proposed in the literature giving a clear classification of them and a description of their main characteristics. Finally, we analyze how the quality of the pansharpened images can be assessed both visually and quantitatively and examine the different quality measures proposed for that purpose.

  7. Multispectral Imaging in Cultural Heritage Conservation

    Science.gov (United States)

    Del Pozo, S.; Rodríguez-Gonzálvez, P.; Sánchez-Aparicio, L. J.; Muñoz-Nieto, A.; Hernández-López, D.; Felipe-García, B.; González-Aguilera, D.

    2017-08-01

    This paper sums up the main contribution derived from the thesis entitled "Multispectral imaging for the analysis of materials and pathologies in civil engineering, constructions and natural spaces" awarded by CIPA-ICOMOS for its connection with the preservation of Cultural Heritage. This thesis is framed within close-range remote sensing approaches by the fusion of sensors operating in the optical domain (visible to shortwave infrared spectrum). In the field of heritage preservation, multispectral imaging is a suitable technique due to its non-destructive nature and its versatility. It combines imaging and spectroscopy to analyse materials and land covers and enables the use of a variety of different geomatic sensors for this purpose. These sensors collect both spatial and spectral information for a given scenario and a specific spectral range, so that, their smaller storage units save the spectral properties of the radiation reflected by the surface of interest. The main goal of this research work is to characterise different construction materials as well as the main pathologies of Cultural Heritage elements by combining active and passive sensors recording data in different ranges. Conclusions about the suitability of each type of sensor and spectral range are drawn in relation to each particular case study and damage. It should be emphasised that results are not limited to images, since 3D intensity data from laser scanners can be integrated with 2D data from passive sensors obtaining high quality products due to the added value that metric brings to multispectral images.

  8. MULTISPECTRAL IMAGING IN CULTURAL HERITAGE CONSERVATION

    Directory of Open Access Journals (Sweden)

    S. Del Pozo

    2017-08-01

    Full Text Available This paper sums up the main contribution derived from the thesis entitled "Multispectral imaging for the analysis of materials and pathologies in civil engineering, constructions and natural spaces" awarded by CIPA-ICOMOS for its connection with the preservation of Cultural Heritage. This thesis is framed within close-range remote sensing approaches by the fusion of sensors operating in the optical domain (visible to shortwave infrared spectrum. In the field of heritage preservation, multispectral imaging is a suitable technique due to its non-destructive nature and its versatility. It combines imaging and spectroscopy to analyse materials and land covers and enables the use of a variety of different geomatic sensors for this purpose. These sensors collect both spatial and spectral information for a given scenario and a specific spectral range, so that, their smaller storage units save the spectral properties of the radiation reflected by the surface of interest. The main goal of this research work is to characterise different construction materials as well as the main pathologies of Cultural Heritage elements by combining active and passive sensors recording data in different ranges. Conclusions about the suitability of each type of sensor and spectral range are drawn in relation to each particular case study and damage. It should be emphasised that results are not limited to images, since 3D intensity data from laser scanners can be integrated with 2D data from passive sensors obtaining high quality products due to the added value that metric brings to multispectral images.

  9. Water Mapping Using Multispectral Airborne LIDAR Data

    Science.gov (United States)

    Yan, W. Y.; Shaker, A.; LaRocque, P. E.

    2018-04-01

    This study investigates the use of the world's first multispectral airborne LiDAR sensor, Optech Titan, manufactured by Teledyne Optech to serve the purpose of automatic land-water classification with a particular focus on near shore region and river environment. Although there exist recent studies utilizing airborne LiDAR data for shoreline detection and water surface mapping, the majority of them only perform experimental testing on clipped data subset or rely on data fusion with aerial/satellite image. In addition, most of the existing approaches require manual intervention or existing tidal/datum data for sample collection of training data. To tackle the drawbacks of previous approaches, we propose and develop an automatic data processing workflow for land-water classification using multispectral airborne LiDAR data. Depending on the nature of the study scene, two methods are proposed for automatic training data selection. The first method utilizes the elevation/intensity histogram fitted with Gaussian mixture model (GMM) to preliminarily split the land and water bodies. The second method mainly relies on the use of a newly developed scan line elevation intensity ratio (SLIER) to estimate the water surface data points. Regardless of the training methods being used, feature spaces can be constructed using the multispectral LiDAR intensity, elevation and other features derived from these parameters. The comprehensive workflow was tested with two datasets collected for different near shore region and river environment, where the overall accuracy yielded better than 96 %.

  10. Aptamer-Modified Magnetic Beads in Biosensing

    Science.gov (United States)

    Scheper, Thomas; Walter, Johanna-Gabriela

    2018-01-01

    Magnetic beads (MBs) are versatile tools for the purification, detection, and quantitative analysis of analytes from complex matrices. The superparamagnetic property of magnetic beads qualifies them for various analytical applications. To provide specificity, MBs can be decorated with ligands like aptamers, antibodies and peptides. In this context, aptamers are emerging as particular promising ligands due to a number of advantages. Most importantly, the chemical synthesis of aptamers enables straightforward and controlled chemical modification with linker molecules and dyes. Moreover, aptamers facilitate novel sensing strategies based on their oligonucleotide nature that cannot be realized with conventional peptide-based ligands. Due to these benefits, the combination of aptamers and MBs was already used in various analytical applications which are summarized in this article. PMID:29601533

  11. Optimizing biosensing properties on undecylenic Acid-functionalized diamond.

    Science.gov (United States)

    Zhong, Yu Lin; Chong, Kwok Feng; May, Paul W; Chen, Zhi-Kuan; Loh, Kian Ping

    2007-05-08

    The optimization of biosensing efficiency on a diamond platform depends on the successful coupling of biomolecules on the surface, and also on effective signal transduction in the biorecognition events. In terms of biofunctionalization of diamond surfaces, surface electrochemical studies of diamond modified with undecylenic acid (UA), with and without headgroup protection, were performed. The direct photochemical coupling method employing UA was found to impart a higher density of carboxylic acid groups on the diamond surface compared to that using trifluoroethyl undecenoate (TFEU) as the protecting group during the coupling process. Non-faradic impedimetric DNA sensing revealed that lightly doped diamond gives better signal transduction sensitivity compared to highly doped diamond.

  12. Label-free and selective nonlinear fiber-optical biosensing

    DEFF Research Database (Denmark)

    Ott, Johan Raunkjær; Heuck, Mikkel; Agger, Christian

    2008-01-01

    We demonstrate that the inherent nonlinearity of a microstructured optical fiber (MOF) may be used to achieve label-free selective biosensing, thereby eliminating the need for post-processing of the fiber. This first nonlinear biosensor utilizes a change in the modulational instability (MI) gain...... for optimizing the sensitivity. The nonlinear sensor shows a sensitivity of around 10.4nm/nm, defined as the shift in resonance wavelength per nm biolayer, which is a factor of 7.5 higher than the hitherto only demonstrated label-free MOF biosensor....

  13. Advances in sensing and biosensing of bisphenols: A review.

    Science.gov (United States)

    Dhanjai; Sinha, Ankita; Wu, Lingxia; Lu, Xianbo; Chen, Jiping; Jain, Rajeev

    2018-01-15

    Bisphenols (BPs) are well known endocrine disrupting chemicals (EDCs) that cause adverse effects on the environment, biotic life and human health. BPs have been studied extensively because of an increasing concern for the safety of the environment and for human health. They are major raw materials for manufacturing polycarbonates, thermal papers and epoxy resins and are considered hazardous environmental contaminants. A vast array of sensors and biosensors have been developed for the sensitive screening of BPs based on carbon nanomaterials (carbon nanotubes, fullerenes, graphene and graphene oxide), quantum dots, metal and metal oxide nanocomposites, polymer nanocomposites, metal organic frameworks, ionic liquids and molecularly imprinted polymers. This review is devoted mainly to a variety of sensitive, selective and reliable sensing and biosensing methods for the detection of BPs using electrochemistry, fluorescence, colorimetry, surface plasmon resonance, luminescence, ELISAs, circular dichroism, resonance Rayleigh scattering and adsorption techniques in plastic products, food samples, food packaging, industrial wastes, pharmaceutical products, human body fluids and many other matrices. It summarizes the advances in sensing and biosensing methods for the detection of BPs since 2010. Furthermore, the article discusses challenges and future perspectives in the development of novel sensing methods for the detection of BP analogs. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Aptamer-Modified Semiconductor Quantum Dots for Biosensing Applications.

    Science.gov (United States)

    Wen, Lin; Qiu, Liping; Wu, Yongxiang; Hu, Xiaoxiao; Zhang, Xiaobing

    2017-07-28

    Semiconductor quantum dots have attracted extensive interest in the biosensing area because of their properties, such as narrow and symmetric emission with tunable colors, high quantum yield, high stability and controllable morphology. The introduction of various reactive functional groups on the surface of semiconductor quantum dots allows one to conjugate a spectrum of ligands, antibodies, peptides, or nucleic acids for broader and smarter applications. Among these ligands, aptamers exhibit many advantages including small size, high chemical stability, simple synthesis with high batch-to-batch consistency and convenient modification. More importantly, it is easy to introduce nucleic acid amplification strategies and/or nanomaterials to improve the sensitivity of aptamer-based sensing systems. Therefore, the combination of semiconductor quantum dots and aptamers brings more opportunities in bioanalysis. Here we summarize recent advances on aptamer-functionalized semiconductor quantum dots in biosensing applications. Firstly, we discuss the properties and structure of semiconductor quantum dots and aptamers. Then, the applications of biosensors based on aptamer-modified semiconductor quantum dots by different signal transducing mechanisms, including optical, electrochemical and electrogenerated chemiluminescence approaches, is discussed. Finally, our perspectives on the challenges and opportunities in this promising field are provided.

  15. Aptamer-Modified Semiconductor Quantum Dots for Biosensing Applications

    Directory of Open Access Journals (Sweden)

    Lin Wen

    2017-07-01

    Full Text Available Semiconductor quantum dots have attracted extensive interest in the biosensing area because of their properties, such as narrow and symmetric emission with tunable colors, high quantum yield, high stability and controllable morphology. The introduction of various reactive functional groups on the surface of semiconductor quantum dots allows one to conjugate a spectrum of ligands, antibodies, peptides, or nucleic acids for broader and smarter applications. Among these ligands, aptamers exhibit many advantages including small size, high chemical stability, simple synthesis with high batch-to-batch consistency and convenient modification. More importantly, it is easy to introduce nucleic acid amplification strategies and/or nanomaterials to improve the sensitivity of aptamer-based sensing systems. Therefore, the combination of semiconductor quantum dots and aptamers brings more opportunities in bioanalysis. Here we summarize recent advances on aptamer-functionalized semiconductor quantum dots in biosensing applications. Firstly, we discuss the properties and structure of semiconductor quantum dots and aptamers. Then, the applications of biosensors based on aptamer-modified semiconductor quantum dots by different signal transducing mechanisms, including optical, electrochemical and electrogenerated chemiluminescence approaches, is discussed. Finally, our perspectives on the challenges and opportunities in this promising field are provided.

  16. Plasmonic Nanomaterial-Based Optical Biosensing Platforms for Virus Detection

    Directory of Open Access Journals (Sweden)

    Jaewook Lee

    2017-10-01

    Full Text Available Plasmonic nanomaterials (P-NM are receiving attention due to their excellent properties, which include surface-enhanced Raman scattering (SERS, localized surface plasmon resonance (LSPR effects, plasmonic resonance energy transfer (PRET, and magneto optical (MO effects. To obtain such plasmonic properties, many nanomaterials have been developed, including metal nanoparticles (MNP, bimetallic nanoparticles (bMNP, MNP-decorated carbon nanotubes, (MNP-CNT, and MNP-modified graphene (MNP-GRP. These P-NMs may eventually be applied to optical biosensing systems due to their unique properties. Here, probe biomolecules, such as antibodies (Ab, probe DNA, and probe aptamers, were modified on the surface of plasmonic materials by chemical conjugation and thiol chemistry. The optical property change in the plasmonic nanomaterials was monitored based on the interaction between the probe biomolecules and target virus. After bioconjugation, several optical properties, including fluorescence, plasmonic absorbance, and diffraction angle, were changed to detect the target biomolecules. This review describes several P-NMs as potential candidates of optical sensing platforms and introduces various applications in the optical biosensing field.

  17. Fingerprint enhancement using a multispectral sensor

    Science.gov (United States)

    Rowe, Robert K.; Nixon, Kristin A.

    2005-03-01

    The level of performance of a biometric fingerprint sensor is critically dependent on the quality of the fingerprint images. One of the most common types of optical fingerprint sensors relies on the phenomenon of total internal reflectance (TIR) to generate an image. Under ideal conditions, a TIR fingerprint sensor can produce high-contrast fingerprint images with excellent feature definition. However, images produced by the same sensor under conditions that include dry skin, dirt on the skin, and marginal contact between the finger and the sensor, are likely to be severely degraded. This paper discusses the use of multispectral sensing as a means to collect additional images with new information about the fingerprint that can significantly augment the system performance under both normal and adverse sample conditions. In the context of this paper, "multispectral sensing" is used to broadly denote a collection of images taken under different illumination conditions: different polarizations, different illumination/detection configurations, as well as different wavelength illumination. Results from three small studies using an early-stage prototype of the multispectral-TIR (MTIR) sensor are presented along with results from the corresponding TIR data. The first experiment produced data from 9 people, 4 fingers from each person and 3 measurements per finger under "normal" conditions. The second experiment provided results from a study performed to test the relative performance of TIR and MTIR images when taken under extreme dry and dirty conditions. The third experiment examined the case where the area of contact between the finger and sensor is greatly reduced.

  18. Reproducible high-resolution multispectral image acquisition in dermatology

    Science.gov (United States)

    Duliu, Alexandru; Gardiazabal, José; Lasser, Tobias; Navab, Nassir

    2015-07-01

    Multispectral image acquisitions are increasingly popular in dermatology, due to their improved spectral resolution which enables better tissue discrimination. Most applications however focus on restricted regions of interest, imaging only small lesions. In this work we present and discuss an imaging framework for high-resolution multispectral imaging on large regions of interest.

  19. Multispectral data compression through transform coding and block quantization

    Science.gov (United States)

    Ready, P. J.; Wintz, P. A.

    1972-01-01

    Transform coding and block quantization techniques are applied to multispectral aircraft scanner data, and digitized satellite imagery. The multispectral source is defined and an appropriate mathematical model proposed. The Karhunen-Loeve, Fourier, and Hadamard encoders are considered and are compared to the rate distortion function for the equivalent Gaussian source and to the performance of the single sample PCM encoder.

  20. Utilization of Multispectral Images for Meat Color Measurements

    DEFF Research Database (Denmark)

    Trinderup, Camilla Himmelstrup; Dahl, Anders Lindbjerg; Carstensen, Jens Michael

    2013-01-01

    This short paper describes how the use of multispectral imaging for color measurement can be utilized in an efficient and descriptive way for meat scientists. The basis of the study is meat color measurements performed with a multispectral imaging system as well as with a standard colorimeter...... of color and color variance than what is obtained by the standard colorimeter....

  1. BEE FORAGE MAPPING BASED ON MULTISPECTRAL IMAGES LANDSAT

    Directory of Open Access Journals (Sweden)

    A. Moskalenko

    2016-10-01

    Full Text Available Possibilities of bee forage identification and mapping based on multispectral images have been shown in the research. Spectral brightness of bee forage has been determined with the use of satellite images. The effectiveness of some methods of image classification for mapping of bee forage is shown. Keywords: bee forage, mapping, multispectral images, image classification.

  2. Precise Multi-Spectral Dermatological Imaging

    DEFF Research Database (Denmark)

    Gomez, David Delgado; Carstensen, Jens Michael; Ersbøll, Bjarne Kjær

    2004-01-01

    In this work, an integrated imaging system to obtain accurate and reproducible multi-spectral dermatological images is proposed. The system is made up of an integrating sphere, light emitting diodes and a generic monochromatic camera. The system can collect up to 10 different spectral bands....... These spectral bands vary from ultraviolet to near infrared. The welldefined and diffuse illumination of the optically closed scene aims to avoid shadows and specular reflections. Furthermore, the system has been developed to guarantee the reproducibility of the collected images. This allows for comparative...

  3. Highly Protable Airborne Multispectral Imaging System

    Science.gov (United States)

    Lehnemann, Robert; Mcnamee, Todd

    2001-01-01

    A portable instrumentation system is described that includes and airborne and a ground-based subsytem. It can acquire multispectral image data over swaths of terrain ranging in width from about 1.5 to 1 km. The system was developed especially for use in coastal environments and is well suited for performing remote sensing and general environmental monitoring. It includes a small,munpilotaed, remotely controlled airplance that carries a forward-looking camera for navigation, three downward-looking monochrome video cameras for imaging terrain in three spectral bands, a video transmitter, and a Global Positioning System (GPS) reciever.

  4. Design and fabrication of multispectral optics using expanded glass map

    Science.gov (United States)

    Bayya, Shyam; Gibson, Daniel; Nguyen, Vinh; Sanghera, Jasbinder; Kotov, Mikhail; Drake, Gryphon; Deegan, John; Lindberg, George

    2015-06-01

    As the desire to have compact multispectral imagers in various DoD platforms is growing, the dearth of multispectral optics is widely felt. With the limited number of material choices for optics, these multispectral imagers are often very bulky and impractical on several weight sensitive platforms. To address this issue, NRL has developed a large set of unique infrared glasses that transmit from 0.9 to > 14 μm in wavelength and expand the glass map for multispectral optics with refractive indices from 2.38 to 3.17. They show a large spread in dispersion (Abbe number) and offer some unique solutions for multispectral optics designs. The new NRL glasses can be easily molded and also fused together to make bonded doublets. A Zemax compatible glass file has been created and is available upon request. In this paper we present some designs, optics fabrication and imaging, all using NRL materials.

  5. Automated oil spill detection with multispectral imagery

    Science.gov (United States)

    Bradford, Brian N.; Sanchez-Reyes, Pedro J.

    2011-06-01

    In this publication we present an automated detection method for ocean surface oil, like that which existed in the Gulf of Mexico as a result of the April 20, 2010 Deepwater Horizon drilling rig explosion. Regions of surface oil in airborne imagery are isolated using red, green, and blue bands from multispectral data sets. The oil shape isolation procedure involves a series of image processing functions to draw out the visual phenomenological features of the surface oil. These functions include selective color band combinations, contrast enhancement and histogram warping. An image segmentation process then separates out contiguous regions of oil to provide a raster mask to an analyst. We automate the detection algorithm to allow large volumes of data to be processed in a short time period, which can provide timely oil coverage statistics to response crews. Geo-referenced and mosaicked data sets enable the largest identified oil regions to be mapped to exact geographic coordinates. In our simulation, multispectral imagery came from multiple sources including first-hand data collected from the Gulf. Results of the simulation show the oil spill coverage area as a raster mask, along with histogram statistics of the oil pixels. A rough square footage estimate of the coverage is reported if the image ground sample distance is available.

  6. Oximetry using multispectral imaging: theory and application

    Science.gov (United States)

    MacKenzie, Lewis E.; Harvey, Andrew R.

    2018-06-01

    Multispectral imaging (MSI) is a technique for measurement of blood oxygen saturation in vivo that can be applied using various imaging modalities to provide new insights into physiology and disease development. This tutorial aims to provide a thorough introduction to the theory and application of MSI oximetry for researchers new to the field, whilst also providing detailed information for more experienced researchers. The optical theory underlying two-wavelength oximetry, three-wavelength oximetry, pulse oximetry, and multispectral oximetry algorithms are described in detail. The varied challenges of applying MSI oximetry to in vivo applications are outlined and discussed, covering: the optical properties of blood and tissue, optical paths in blood vessels, tissue auto-fluorescence, oxygen diffusion, and common oximetry artefacts. Essential image processing techniques for MSI are discussed, in particular, image acquisition, image registration strategies, and blood vessel line profile fitting. Calibration and validation strategies for MSI are discussed, including comparison techniques, physiological interventions, and phantoms. The optical principles and unique imaging capabilities of various cutting-edge MSI oximetry techniques are discussed, including photoacoustic imaging, spectroscopic optical coherence tomography, and snapshot MSI.

  7. Multispectral open-air intraoperative fluorescence imaging.

    Science.gov (United States)

    Behrooz, Ali; Waterman, Peter; Vasquez, Kristine O; Meganck, Jeff; Peterson, Jeffrey D; Faqir, Ilias; Kempner, Joshua

    2017-08-01

    Intraoperative fluorescence imaging informs decisions regarding surgical margins by detecting and localizing signals from fluorescent reporters, labeling targets such as malignant tissues. This guidance reduces the likelihood of undetected malignant tissue remaining after resection, eliminating the need for additional treatment or surgery. The primary challenges in performing open-air intraoperative fluorescence imaging come from the weak intensity of the fluorescence signal in the presence of strong surgical and ambient illumination, and the auto-fluorescence of non-target components, such as tissue, especially in the visible spectral window (400-650 nm). In this work, a multispectral open-air fluorescence imaging system is presented for translational image-guided intraoperative applications, which overcomes these challenges. The system is capable of imaging weak fluorescence signals with nanomolar sensitivity in the presence of surgical illumination. This is done using synchronized fluorescence excitation and image acquisition with real-time background subtraction. Additionally, the system uses a liquid crystal tunable filter for acquisition of multispectral images that are used to spectrally unmix target fluorescence from non-target auto-fluorescence. Results are validated by preclinical studies on murine models and translational canine oncology models.

  8. A Microfluidic Love-Wave Biosensing Device for PSA Detection Based on an Aptamer Beacon Probe.

    Science.gov (United States)

    Zhang, Feng; Li, Shuangming; Cao, Kang; Wang, Pengjuan; Su, Yan; Zhu, Xinhua; Wan, Ying

    2015-06-11

    A label-free and selective aptamer beacon-based Love-wave biosensing device was developed for prostate specific antigen (PSA) detection. The device consists of the following parts: LiTaO3 substrate with SiO2 film as wave guide layer, two set of inter-digital transducers (IDT), gold film for immobilization of the biorecongniton layer and a polydimethylsiloxane (PDMS) microfluidic channels. DNA aptamer, or "artificial antibody", was used as the specific biorecognition probe for PSA capture. Some nucleotides were added to the 3'-end of the aptamer to form a duplex with the 3'-end, turning the aptamer into an aptamer-beacon. Taking advantage of the selective target-induced assembly changes arising from the "aptamer beacon", highly selective and specific detection of PSA was achieved. Furthermore, PDMS microfluidic channels were designed and fabricated to realize automated quantitative sample injection. After optimization of the experimental conditions, the established device showed good performance for PSA detection between 10 ng/mL to 1 μg/mL, with a detection limit of 10 ng/mL. The proposed sensor might be a promising alternative for point of care diagnostics.

  9. Whole-body and multispectral photoacoustic imaging of adult zebrafish

    Science.gov (United States)

    Huang, Na; Xi, Lei

    2016-10-01

    Zebrafish is a top vertebrate model to study developmental biology and genetics, and it is becoming increasingly popular for studying human diseases due to its high genome similarity to that of humans and the optical transparency in embryonic stages. However, it becomes difficult for pure optical imaging techniques to volumetric visualize the internal organs and structures of wild-type zebrafish in juvenile and adult stages with excellent resolution and penetration depth. Even with the establishment of mutant lines which remain transparent over the life cycle, it is still a challenge for pure optical imaging modalities to image the whole body of adult zebrafish with micro-scale resolution. However, the method called photoacoustic imaging that combines all the advantages of the optical imaging and ultrasonic imaging provides a new way to image the whole body of the zebrafish. In this work, we developed a non-invasive photoacoustic imaging system with optimized near-infrared illumination and cylindrical scanning to image the zebrafish. The lateral and axial resolution yield to 80 μm and 600 μm, respectively. Multispectral strategy with wavelengths from 690 nm to 930 nm was employed to image various organs inside the zebrafish. From the reconstructed images, most major organs and structures inside the body can be precisely imaged. Quantitative and statistical analysis of absorption for organs under illumination with different wavelengths were carried out.

  10. Frequency position modulation using multi-spectral projections

    Science.gov (United States)

    Goodman, Joel; Bertoncini, Crystal; Moore, Michael; Nousain, Bryan; Cowart, Gregory

    2012-10-01

    In this paper we present an approach to harness multi-spectral projections (MSPs) to carefully shape and locate tones in the spectrum, enabling a new and robust modulation in which a signal's discrete frequency support is used to represent symbols. This method, called Frequency Position Modulation (FPM), is an innovative extension to MT-FSK and OFDM and can be non-uniformly spread over many GHz of instantaneous bandwidth (IBW), resulting in a communications system that is difficult to intercept and jam. The FPM symbols are recovered using adaptive projections that in part employ an analog polynomial nonlinearity paired with an analog-to-digital converter (ADC) sampling at a rate at that is only a fraction of the IBW of the signal. MSPs also facilitate using commercial of-the-shelf (COTS) ADCs with uniform-sampling, standing in sharp contrast to random linear projections by random sampling, which requires a full Nyquist rate sample-and-hold. Our novel communication system concept provides an order of magnitude improvement in processing gain over conventional LPI/LPD communications (e.g., FH- or DS-CDMA) and facilitates the ability to operate in interference laden environments where conventional compressed sensing receivers would fail. We quantitatively analyze the bit error rate (BER) and processing gain (PG) for a maximum likelihood based FPM demodulator and demonstrate its performance in interference laden conditions.

  11. Different techniques of multispectral data analysis for vegetation fraction retrieval

    Science.gov (United States)

    Kancheva, Rumiana; Georgiev, Georgi

    2012-07-01

    Vegetation monitoring is one of the most important applications of remote sensing technologies. In respect to farmlands, the assessment of crop condition constitutes the basis of growth, development, and yield processes monitoring. Plant condition is defined by a set of biometric variables, such as density, height, biomass amount, leaf area index, and etc. The canopy cover fraction is closely related to these variables, and is state-indicative of the growth process. At the same time it is a defining factor of the soil-vegetation system spectral signatures. That is why spectral mixtures decomposition is a primary objective in remotely sensed data processing and interpretation, specifically in agricultural applications. The actual usefulness of the applied methods depends on their prediction reliability. The goal of this paper is to present and compare different techniques for quantitative endmember extraction from soil-crop patterns reflectance. These techniques include: linear spectral unmixing, two-dimensional spectra analysis, spectral ratio analysis (vegetation indices), spectral derivative analysis (red edge position), colorimetric analysis (tristimulus values sum, chromaticity coordinates and dominant wavelength). The objective is to reveal their potential, accuracy and robustness for plant fraction estimation from multispectral data. Regression relationships have been established between crop canopy cover and various spectral estimators.

  12. An integrated compact airborne multispectral imaging system using embedded computer

    Science.gov (United States)

    Zhang, Yuedong; Wang, Li; Zhang, Xuguo

    2015-08-01

    An integrated compact airborne multispectral imaging system using embedded computer based control system was developed for small aircraft multispectral imaging application. The multispectral imaging system integrates CMOS camera, filter wheel with eight filters, two-axis stabilized platform, miniature POS (position and orientation system) and embedded computer. The embedded computer has excellent universality and expansibility, and has advantages in volume and weight for airborne platform, so it can meet the requirements of control system of the integrated airborne multispectral imaging system. The embedded computer controls the camera parameters setting, filter wheel and stabilized platform working, image and POS data acquisition, and stores the image and data. The airborne multispectral imaging system can connect peripheral device use the ports of the embedded computer, so the system operation and the stored image data management are easy. This airborne multispectral imaging system has advantages of small volume, multi-function, and good expansibility. The imaging experiment results show that this system has potential for multispectral remote sensing in applications such as resource investigation and environmental monitoring.

  13. Polymer-Graphene Nanocomposite Materials for Electrochemical Biosensing.

    Science.gov (United States)

    Sobolewski, Peter; Piwowarczyk, Magdalena; Fray, Mirosława El

    2016-07-01

    Biosensing is an important and rapidly developing field, with numerous potential applications in health care, food processing, and environmental control. Polymer-graphene nanocomposites aim to leverage the unique, attractive properties of graphene by combining them with those of a polymer matrix. Molecular imprinted polymers, in particular, offer the promise of artificial biorecognition elements. A variety of polymers, including intrinsically conducting polymers (polyaniline, polypyrrole), bio-based polymers (chitosan, polycatechols), and polycationic polymers (poly(diallyldimethylammonium chloride), polyethyleneimine), have been utilized as matrices for graphene-based nanofillers, yielding sensitive biosensors for various biomolecules, such as proteins, nucleic acids, and small molecules. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Current trends in electrochemical sensing and biosensing of DNA methylation.

    Science.gov (United States)

    Krejcova, Ludmila; Richtera, Lukas; Hynek, David; Labuda, Jan; Adam, Vojtech

    2017-11-15

    DNA methylation plays an important role in physiological and pathological processes. Several genetic diseases and most malignancies tend to be associated with aberrant DNA methylation. Among other analytical methods, electrochemical approaches have been successfully employed for characterisation of DNA methylation patterns that are essential for the diagnosis and treatment of particular diseases. This article discusses current trends in the electrochemical sensing and biosensing of DNA methylation. Particularly, it provides an overview of applied electrode materials, electrode modifications and biorecognition elements applications with an emphasis on strategies that form the core DNA methylation detection approaches. The three main strategies as (i) bisulfite treatment, (ii) cleavage by restriction endonucleases, and (iii) immuno/affinity reaction were described in greater detail. Additionally, the availability of the reviewed platforms for early cancer diagnosis and the approval of methylation inhibitors for anticancer therapy were discussed. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. In vitro osteosarcoma biosensing using THz time domain spectroscopy

    Science.gov (United States)

    Ferguson, Bradley S.; Liu, Haibo; Hay, Shelley; Findlay, David; Zhang, Xi-Cheng; Abbott, Derek

    2004-03-01

    Terahertz time domain spectroscopy (THz-TDS) has a wide range of applications from semiconductor diagnostics to biosensing. Recent attention has focused on bio-applications and several groups have noted the ability of THz-TDS to differentiate basal cell carcinoma tissue from healthy dermal tissue ex vivo. The contrast mechanism is unclear but has been attributed to increased interstitial water in cancerous tissue. In this work we investigate the THz response of human osteosarcoma cells and normal human bone cells grown in culture to isolate the cells' responses from other effects. A classification algorithms based on a frequency selection by genetic algorithm is used to attempt to differentiate between the cell types based on the THz spectra. Encouraging preliminary results have been obtained.

  16. Nanostructured gold and platinum electrodes on silicon structures for biosensing

    International Nuclear Information System (INIS)

    Ogurtsov, V I; Sheehan, M M

    2005-01-01

    Gold and platinum metal electrodes on Si/SiO 2 having undergone anisotropic potassium hydroxide (KOH) etch treatment are considered. This treatment etches at different rates and directions in the material resulting in creation of numerous pyramid shaped holes in the silicon substrate. This surface is used to make metal electrodes with increased electrode efficiency. The electrodes can serve as the sensors or as the sensor substrates (for surface polymer modification) and because both gold and platinum are inert they have applications for food safety biosensing. Wine, an economically significant food product, was chosen as a matrix, and impedance spectroscopy (EIS) was selected as a method of investigation of electrode behaviour. Based on results of EIS, different complexity equivalent circuits were determined by applying fitting mean square root optimisation of sensor complex impedance measurements

  17. In Vitro and In Vivo SERS Biosensing for Disease Diagnosis

    Directory of Open Access Journals (Sweden)

    T. Joshua Moore

    2018-05-01

    Full Text Available For many disease states, positive outcomes are directly linked to early diagnosis, where therapeutic intervention would be most effective. Recently, trends in disease diagnosis have focused on the development of label-free sensing techniques that are sensitive to low analyte concentrations found in the physiological environment. Surface-enhanced Raman spectroscopy (SERS is a powerful vibrational spectroscopy that allows for label-free, highly sensitive, and selective detection of analytes through the amplification of localized electric fields on the surface of a plasmonic material when excited with monochromatic light. This results in enhancement of the Raman scattering signal, which allows for the detection of low concentration analytes, giving rise to the use of SERS as a diagnostic tool for disease. Here, we present a review of recent developments in the field of in vivo and in vitro SERS biosensing for a range of disease states including neurological disease, diabetes, cardiovascular disease, cancer, and viral disease.

  18. New Trends in Food Allergens Detection: Toward Biosensing Strategies.

    Science.gov (United States)

    Alves, Rita C; Barroso, M Fátima; González-García, María Begoña; Oliveira, M Beatriz P P; Delerue-Matos, Cristina

    2016-10-25

    Food allergens are a real threat to sensitized individuals. Although food labeling is crucial to provide information to consumers with food allergies, accidental exposure to allergenic proteins may result from undeclared allergenic substances by means of food adulteration, fraud or uncontrolled cross-contamination. Allergens detection in foodstuffs can be a very hard task, due to their presence usually in trace amounts, together with the natural interference of the matrix. Methods for allergens analysis can be mainly divided in two large groups: the immunological assays and the DNA-based ones. Mass spectrometry has also been used as a confirmatory tool. Recently, biosensors appeared as innovative, sensitive, selective, environmentally friendly, cheaper and fast techniques (especially when automated and/or miniaturized), able to effectively replace the classical methodologies. In this review, we present the advances in the field of food allergens detection toward the biosensing strategies and discuss the challenges and future perspectives of this technology.

  19. Label-acquired magnetorotation for biosensing: An asynchronous rotation assay

    International Nuclear Information System (INIS)

    Hecht, Ariel; Kinnunen, Paivo; McNaughton, Brandon; Kopelman, Raoul

    2011-01-01

    This paper presents a novel application of magnetic particles for biosensing, called label-acquired magnetorotation (LAM). This method is based on a combination of the traditional sandwich assay format with the asynchronous magnetic bead rotation (AMBR) method. In label-acquired magnetorotation, an analyte facilitates the binding of a magnetic label bead to a nonmagnetic solid phase sphere, forming a sandwich complex. The sandwich complex is then placed in a rotating magnetic field, where the rotational frequency of the sandwich complex is a function of the amount of analyte attached to the surface of the sphere. Here, we use streptavidin-coated beads and biotin-coated particles as analyte mimics, to be replaced by proteins and other biological targets in future work. We show this sensing method to have a dynamic range of two orders of magnitude.

  20. Cylindrical optical resonators: fundamental properties and bio-sensing characteristics

    Science.gov (United States)

    Khozeymeh, Foroogh; Razaghi, Mohammad

    2018-04-01

    In this paper, detailed theoretical analysis of cylindrical resonators is demonstrated. As illustrated, these kinds of resonators can be used as optical bio-sensing devices. The proposed structure is analyzed using an analytical method based on Lam's approximation. This method is systematic and has simplified the tedious process of whispering-gallery mode (WGM) wavelength analysis in optical cylindrical biosensors. By this method, analysis of higher radial orders of high angular momentum WGMs has been possible. Using closed-form analytical equations, resonance wavelengths of higher radial and angular order WGMs of TE and TM polarization waves are calculated. It is shown that high angular momentum WGMs are more appropriate for bio-sensing applications. Some of the calculations are done using a numerical non-linear Newton method. A perfect match of 99.84% between the analytical and the numerical methods has been achieved. In order to verify the validity of the calculations, Meep simulations based on the finite difference time domain (FDTD) method are performed. In this case, a match of 96.70% between the analytical and FDTD results has been obtained. The analytical predictions are in good agreement with other experimental work (99.99% match). These results validate the proposed analytical modelling for the fast design of optical cylindrical biosensors. It is shown that by extending the proposed two-layer resonator structure analyzing scheme, it is possible to study a three-layer cylindrical resonator structure as well. Moreover, by this method, fast sensitivity optimization in cylindrical resonator-based biosensors has been possible. Sensitivity of the WGM resonances is analyzed as a function of the structural parameters of the cylindrical resonators. Based on the results, fourth radial order WGMs, with a resonator radius of 50 μm, display the most bulk refractive index sensitivity of 41.50 (nm/RIU).

  1. Nanostructuring of biosensing electrodes with nanodiamonds for antibody immobilization.

    Science.gov (United States)

    Zhang, Wenli; Patel, Kush; Schexnider, Andrew; Banu, Shirin; Radadia, Adarsh D

    2014-02-25

    While chemical vapor deposition of diamond films is currently cost prohibitive for biosensor construction, in this paper, we show that sonication-assisted nanostructuring of biosensing electrodes with nanodiamonds (NDs) allows harnessing the hydrolytic stability of the diamond biofunctionalization chemistry for real-time continuous sensing, while improving the detector sensitivity and stability. We find that the higher surface coverages were important for improved bacterial capture and can be achieved through proper choice of solvent, ND concentration, and seeding time. A mixture of methanol and dimethyl sulfoxide provides the highest surface coverage (33.6 ± 3.4%) for the NDs with positive zeta-potential, compared to dilutions of dimethyl sulfoxide with acetone, ethanol, isopropyl alcohol, or water. Through impedance spectroscopy of ND-seeded interdigitated electrodes (IDEs), we found that the ND seeds serve as electrically conductive islands only a few nanometers apart. Also we show that the seeded NDs are amply hydrogenated to be decorated with antibodies using the UV-alkene chemistry, and higher bacterial captures can be obtained compared to our previously reported work with diamond films. When sensing bacteria from 10(6) cfu/mL E. coli O157:H7, the resistance to charge transfer at the IDEs decreased by ∼ 38.8%, which is nearly 1.5 times better than that reported previously using redox probes. Further in the case of 10(8) cfu/mL E. coli O157:H7, the charge transfer resistance changed by ∼ 46%, which is similar to the magnitude of improvement reported using magnetic nanoparticle-based sample enrichment prior to impedance detection. Thus ND seeding allows impedance biosensing in low conductivity solutions with competitive sensitivity.

  2. Magnetoresistive biosensors for quantitative proteomics

    Science.gov (United States)

    Zhou, Xiahan; Huang, Chih-Cheng; Hall, Drew A.

    2017-08-01

    Quantitative proteomics, as a developing method for study of proteins and identification of diseases, reveals more comprehensive and accurate information of an organism than traditional genomics. A variety of platforms, such as mass spectrometry, optical sensors, electrochemical sensors, magnetic sensors, etc., have been developed for detecting proteins quantitatively. The sandwich immunoassay is widely used as a labeled detection method due to its high specificity and flexibility allowing multiple different types of labels. While optical sensors use enzyme and fluorophore labels to detect proteins with high sensitivity, they often suffer from high background signal and challenges in miniaturization. Magnetic biosensors, including nuclear magnetic resonance sensors, oscillator-based sensors, Hall-effect sensors, and magnetoresistive sensors, use the specific binding events between magnetic nanoparticles (MNPs) and target proteins to measure the analyte concentration. Compared with other biosensing techniques, magnetic sensors take advantage of the intrinsic lack of magnetic signatures in biological samples to achieve high sensitivity and high specificity, and are compatible with semiconductor-based fabrication process to have low-cost and small-size for point-of-care (POC) applications. Although still in the development stage, magnetic biosensing is a promising technique for in-home testing and portable disease monitoring.

  3. Lattice algebra approach to multispectral analysis of ancient documents.

    Science.gov (United States)

    Valdiviezo-N, Juan C; Urcid, Gonzalo

    2013-02-01

    This paper introduces a lattice algebra procedure that can be used for the multispectral analysis of historical documents and artworks. Assuming the presence of linearly mixed spectral pixels captured in a multispectral scene, the proposed method computes the scaled min- and max-lattice associative memories to determine the purest pixels that best represent the spectra of single pigments. The estimation of fractional proportions of pure spectra at each image pixel is used to build pigment abundance maps that can be used for subsequent restoration of damaged parts. Application examples include multispectral images acquired from the Archimedes Palimpsest and a Mexican pre-Hispanic codex.

  4. Optical nano-biosensing interface via nucleic acid amplification strategy: construction and application.

    Science.gov (United States)

    Zhou, Hong; Liu, Jing; Xu, Jing-Juan; Zhang, Shu-Sheng; Chen, Hong-Yuan

    2018-03-21

    Modern optical detection technology plays a critical role in current clinical detection due to its high sensitivity and accuracy. However, higher requirements such as extremely high detection sensitivity have been put forward due to the clinical needs for the early finding and diagnosing of malignant tumors which are significant for tumor therapy. The technology of isothermal amplification with nucleic acids opens up avenues for meeting this requirement. Recent reports have shown that a nucleic acid amplification-assisted modern optical sensing interface has achieved satisfactory sensitivity and accuracy, high speed and specificity. Compared with isothermal amplification technology designed to work completely in a solution system, solid biosensing interfaces demonstrated better performances in stability and sensitivity due to their ease of separation from the reaction mixture and the better signal transduction on these optical nano-biosensing interfaces. Also the flexibility and designability during the construction of these nano-biosensing interfaces provided a promising research topic for the ultrasensitive detection of cancer diseases. In this review, we describe the construction of the burgeoning number of optical nano-biosensing interfaces assisted by a nucleic acid amplification strategy, and provide insightful views on: (1) approaches to the smart fabrication of an optical nano-biosensing interface, (2) biosensing mechanisms via the nucleic acid amplification method, (3) the newest strategies and future perspectives.

  5. Synchronous atmospheric radiation correction of GF-2 satellite multispectral image

    Science.gov (United States)

    Bian, Fuqiang; Fan, Dongdong; Zhang, Yan; Wang, Dandan

    2018-02-01

    GF-2 remote sensing products have been widely used in many fields for its high-quality information, which provides technical support for the the macroeconomic decisions. Atmospheric correction is the necessary part in the data preprocessing of the quantitative high resolution remote sensing, which can eliminate the signal interference in the radiation path caused by atmospheric scattering and absorption, and reducting apparent reflectance into real reflectance of the surface targets. Aiming at the problem that current research lack of atmospheric date which are synchronization and region matching of the surface observation image, this research utilize the MODIS Level 1B synchronous data to simulate synchronized atmospheric condition, and write programs to implementation process of aerosol retrieval and atmospheric correction, then generate a lookup table of the remote sensing image based on the radioactive transfer model of 6S (second simulation of a satellite signal in the solar spectrum) to correct the atmospheric effect of multispectral image from GF-2 satellite PMS-1 payload. According to the correction results, this paper analyzes the pixel histogram of the reflectance spectrum of the 4 spectral bands of PMS-1, and evaluates the correction results of different spectral bands. Then conducted a comparison experiment on the same GF-2 image based on the QUAC. According to the different targets respectively statistics the average value of NDVI, implement a comparative study of NDVI from two different results. The degree of influence was discussed by whether to adopt synchronous atmospheric date. The study shows that the result of the synchronous atmospheric parameters have significantly improved the quantitative application of the GF-2 remote sensing data.

  6. Multispectral tissue characterization for intestinal anastomosis optimization

    Science.gov (United States)

    Cha, Jaepyeong; Shademan, Azad; Le, Hanh N. D.; Decker, Ryan; Kim, Peter C. W.; Kang, Jin U.; Krieger, Axel

    2015-10-01

    Intestinal anastomosis is a surgical procedure that restores bowel continuity after surgical resection to treat intestinal malignancy, inflammation, or obstruction. Despite the routine nature of intestinal anastomosis procedures, the rate of complications is high. Standard visual inspection cannot distinguish the tissue subsurface and small changes in spectral characteristics of the tissue, so existing tissue anastomosis techniques that rely on human vision to guide suturing could lead to problems such as bleeding and leakage from suturing sites. We present a proof-of-concept study using a portable multispectral imaging (MSI) platform for tissue characterization and preoperative surgical planning in intestinal anastomosis. The platform is composed of a fiber ring light-guided MSI system coupled with polarizers and image analysis software. The system is tested on ex vivo porcine intestine tissue, and we demonstrate the feasibility of identifying optimal regions for suture placement.

  7. Peach Flower Monitoring Using Aerial Multispectral Imaging

    Directory of Open Access Journals (Sweden)

    Ryan Horton

    2017-01-01

    Full Text Available One of the tools for optimal crop production is regular monitoring and assessment of crops. During the growing season of fruit trees, the bloom period has increased photosynthetic rates that correlate with the fruiting process. This paper presents the development of an image processing algorithm to detect peach blossoms on trees. Aerial images of peach (Prunus persica trees were acquired from both experimental and commercial peach orchards in the southwestern part of Idaho using an off-the-shelf unmanned aerial system (UAS, equipped with a multispectral camera (near-infrared, green, blue. The image processing algorithm included contrast stretching of the three bands to enhance the image and thresholding segmentation method to detect the peach blossoms. Initial results showed that the image processing algorithm could detect peach blossoms with an average detection rate of 84.3% and demonstrated good potential as a monitoring tool for orchard management.

  8. Automated road network extraction from high spatial resolution multi-spectral imagery

    Science.gov (United States)

    Zhang, Qiaoping

    For the last three decades, the Geomatics Engineering and Computer Science communities have considered automated road network extraction from remotely-sensed imagery to be a challenging and important research topic. The main objective of this research is to investigate the theory and methodology of automated feature extraction for image-based road database creation, refinement or updating, and to develop a series of algorithms for road network extraction from high resolution multi-spectral imagery. The proposed framework for road network extraction from multi-spectral imagery begins with an image segmentation using the k-means algorithm. This step mainly concerns the exploitation of the spectral information for feature extraction. The road cluster is automatically identified using a fuzzy classifier based on a set of predefined road surface membership functions. These membership functions are established based on the general spectral signature of road pavement materials and the corresponding normalized digital numbers on each multi-spectral band. Shape descriptors of the Angular Texture Signature are defined and used to reduce the misclassifications between roads and other spectrally similar objects (e.g., crop fields, parking lots, and buildings). An iterative and localized Radon transform is developed for the extraction of road centerlines from the classified images. The purpose of the transform is to accurately and completely detect the road centerlines. It is able to find short, long, and even curvilinear lines. The input image is partitioned into a set of subset images called road component images. An iterative Radon transform is locally applied to each road component image. At each iteration, road centerline segments are detected based on an accurate estimation of the line parameters and line widths. Three localization approaches are implemented and compared using qualitative and quantitative methods. Finally, the road centerline segments are grouped into a

  9. Development of a surface plasmon resonance biosensing approach for the rapid detection of porcine circovirus type2 in sample solutions.

    Directory of Open Access Journals (Sweden)

    Jiandong Hu

    Full Text Available A sensitive and label-free analytical approach for the detection of porcine circovirus type 2 (PCV2 instead of PCV2 antibody in serum sample was systematically investigated in this research based on surface plasmon resonance (SPR with an establishment of special molecular identification membrane. The experimental device for constructing the biosensing analyzer is composed of an integrated biosensor, a home-made microfluidic module, and an electrical control circuit incorporated with a photoelectric converter. In order to detect the PCV2 using the surface plasmon resonance immunoassay, the mercaptopropionic acid has been used to bind the Au film in advance through the known form of the strong S-Au covalent bonds formed by the chemical radical of the mercaptopropionic acid and the Au film. PCV2 antibodies were bonded with the mercaptopropionic acid by covalent -CO-NH- amide bonding. For the purpose of evaluating the performance of this approach, the known concentrations of PCV2 Cap protein of 10 µg/mL, 7.5 µg/mL, 5 µg/mL, 2.5 µg/mL, 1 µg/mL, and 0.5 µg/mL were prepared by diluting with PBS successively and then the delta response units (ΔRUs were measured individually. Using the data collected from the linear CCD array, the ΔRUs gave a linear response over a wide concentration range of standard known concentrations of PCV2 Cap protein with the R-Squared value of 0.99625. The theoretical limit of detection was calculated to be 0.04 µg/mL for the surface plasmon resonance biosensing approach. Correspondingly, the recovery rate ranged from 81.0% to 89.3% was obtained. In contrast to the PCV2 detection kits, this surface plasmon resonance biosensing system was validated through linearity, precision and recovery, which demonstrated that the surface plasmon resonance immunoassay is reliable and robust. It was concluded that the detection method which is associated with biomembrane properties is expected to contribute much to determine the PCV2

  10. MRO CRISM MULTISPECTRAL REDUCED DATA RECORD V1.0

    Data.gov (United States)

    National Aeronautics and Space Administration — This dataset contains CRISM Multispectral Reduced Data Records (MRDRs). MRDRs are organized into 30 subdirectories named by the Mars Chart containing the MRDR, e.g....

  11. Landsat 1-5 Multispectral Scanner V1

    Data.gov (United States)

    National Aeronautics and Space Administration — Abstract: The Landsat Multispectral Scanner (MSS) was a sensor onboard Landsats 1 through 5 and acquired images of the Earth nearly continuously from July 1972 to...

  12. Active Multispectral Band Selection and Reflectance Measurement System

    National Research Council Canada - National Science Library

    Rennich, Bradley

    1999-01-01

    .... To aid in the selection of these bands, a novel multispectral band selection technique is presented based on the cross-correlation of the material class reflectance spectra over a wavelength range of 1 - 5 microns...

  13. Optimal wavelength band clustering for multispectral iris recognition.

    Science.gov (United States)

    Gong, Yazhuo; Zhang, David; Shi, Pengfei; Yan, Jingqi

    2012-07-01

    This work explores the possibility of clustering spectral wavelengths based on the maximum dissimilarity of iris textures. The eventual goal is to determine how many bands of spectral wavelengths will be enough for iris multispectral fusion and to find these bands that will provide higher performance of iris multispectral recognition. A multispectral acquisition system was first designed for imaging the iris at narrow spectral bands in the range of 420 to 940 nm. Next, a set of 60 human iris images that correspond to the right and left eyes of 30 different subjects were acquired for an analysis. Finally, we determined that 3 clusters were enough to represent the 10 feature bands of spectral wavelengths using the agglomerative clustering based on two-dimensional principal component analysis. The experimental results suggest (1) the number, center, and composition of clusters of spectral wavelengths and (2) the higher performance of iris multispectral recognition based on a three wavelengths-bands fusion.

  14. New Capabilities in the Astrophysics Multispectral Archive Search Engine

    Science.gov (United States)

    Cheung, C. Y.; Kelley, S.; Roussopoulos, N.

    The Astrophysics Multispectral Archive Search Engine (AMASE) uses object-oriented database techniques to provide a uniform multi-mission and multi-spectral interface to search for data in the distributed archives. We describe our experience of porting AMASE from Illustra object-relational DBMS to the Informix Universal Data Server. New capabilities and utilities have been developed, including a spatial datablade that supports Nearest Neighbor queries.

  15. Novel instrumentation of multispectral imaging technology for detecting tissue abnormity

    Science.gov (United States)

    Yi, Dingrong; Kong, Linghua

    2012-10-01

    Multispectral imaging is becoming a powerful tool in a wide range of biological and clinical studies by adding spectral, spatial and temporal dimensions to visualize tissue abnormity and the underlying biological processes. A conventional spectral imaging system includes two physically separated major components: a band-passing selection device (such as liquid crystal tunable filter and diffraction grating) and a scientific-grade monochromatic camera, and is expensive and bulky. Recently micro-arrayed narrow-band optical mosaic filter was invented and successfully fabricated to reduce the size and cost of multispectral imaging devices in order to meet the clinical requirement for medical diagnostic imaging applications. However the challenging issue of how to integrate and place the micro filter mosaic chip to the targeting focal plane, i.e., the imaging sensor, of an off-shelf CMOS/CCD camera is not reported anywhere. This paper presents the methods and results of integrating such a miniaturized filter with off-shelf CMOS imaging sensors to produce handheld real-time multispectral imaging devices for the application of early stage pressure ulcer (ESPU) detection. Unlike conventional multispectral imaging devices which are bulky and expensive, the resulting handheld real-time multispectral ESPU detector can produce multiple images at different center wavelengths with a single shot, therefore eliminates the image registration procedure required by traditional multispectral imaging technologies.

  16. Object Classification Using Airborne Multispectral LiDAR Data

    Directory of Open Access Journals (Sweden)

    PAN Suoyan

    2018-02-01

    Full Text Available Airborne multispectral LiDAR system,which obtains surface geometry and spectral data of objects,simultaneously,has become a fast effective,large-scale spatial data acquisition method.Multispectral LiDAR data are characteristics of completeness and consistency of spectrum and spatial geometric information.Support vector machine (SVM,a machine learning method,is capable of classifying objects based on small samples.Therefore,by means of SVM,this paper performs land cover classification using multispectral LiDAR data. First,all independent point cloud with different wavelengths are merged into a single point cloud,where each pixel contains the three-wavelength spectral information.Next,the merged point cloud is converted into range and intensity images.Finally,land-cover classification is performed by means of SVM.All experiments were conducted on the Optech Titan multispectral LiDAR data,containing three individual point cloud collected by 532 nm,1024 nm,and 1550 nm laser beams.Experimental results demonstrate that ①compared to traditional single-wavelength LiDAR data,multispectral LiDAR data provide a promising solution to land use and land cover applications;②SVM is a feasible method for land cover classification of multispectral LiDAR data.

  17. Topographically Engineered Large Scale Nanostructures for Plasmonic Biosensing

    Science.gov (United States)

    Xiao, Bo; Pradhan, Sangram K.; Santiago, Kevin C.; Rutherford, Gugu N.; Pradhan, Aswini K.

    2016-04-01

    We demonstrate that a nanostructured metal thin film can achieve enhanced transmission efficiency and sharp resonances and use a large-scale and high-throughput nanofabrication technique for the plasmonic structures. The fabrication technique combines the features of nanoimprint and soft lithography to topographically construct metal thin films with nanoscale patterns. Metal nanogratings developed using this method show significantly enhanced optical transmission (up to a one-order-of-magnitude enhancement) and sharp resonances with full width at half maximum (FWHM) of ~15nm in the zero-order transmission using an incoherent white light source. These nanostructures are sensitive to the surrounding environment, and the resonance can shift as the refractive index changes. We derive an analytical method using a spatial Fourier transformation to understand the enhancement phenomenon and the sensing mechanism. The use of real-time monitoring of protein-protein interactions in microfluidic cells integrated with these nanostructures is demonstrated to be effective for biosensing. The perpendicular transmission configuration and large-scale structures provide a feasible platform without sophisticated optical instrumentation to realize label-free surface plasmon resonance (SPR) sensing.

  18. Printed organo-functionalized graphene for biosensing applications.

    Science.gov (United States)

    Wisitsoraat, A; Mensing, J Ph; Karuwan, C; Sriprachuabwong, C; Jaruwongrungsee, K; Phokharatkul, D; Daniels, T M; Liewhiran, C; Tuantranont, A

    2017-01-15

    Graphene is a highly promising material for biosensors due to its excellent physical and chemical properties which facilitate electron transfer between the active locales of enzymes or other biomaterials and a transducer surface. Printing technology has recently emerged as a low-cost and practical method for fabrication of flexible and disposable electronics devices. The combination of these technologies is promising for the production and commercialization of low cost sensors. In this review, recent developments in organo-functionalized graphene and printed biosensor technologies are comprehensively covered. Firstly, various methods for printing graphene-based fluids on different substrates are discussed. Secondly, different graphene-based ink materials and preparation methods are described. Lastly, biosensing performances of printed or printable graphene-based electrochemical and field effect transistor sensors for some important analytes are elaborated. The reported printed graphene based sensors exhibit promising properties with good reliability suitable for commercial applications. Among most reports, only a few printed graphene-based biosensors including screen-printed oxidase-functionalized graphene biosensor have been demonstrated. The technology is still at early stage but rapidly growing and will earn great attention in the near future due to increasing demand of low-cost and disposable biosensors. Copyright © 2016 Elsevier B.V. All rights reserved.

  19. Recent Advances in Bioprinting and Applications for Biosensing

    Directory of Open Access Journals (Sweden)

    Andrew D. Dias

    2014-04-01

    Full Text Available Future biosensing applications will require high performance, including real-time monitoring of physiological events, incorporation of biosensors into feedback-based devices, detection of toxins, and advanced diagnostics. Such functionality will necessitate biosensors with increased sensitivity, specificity, and throughput, as well as the ability to simultaneously detect multiple analytes. While these demands have yet to be fully realized, recent advances in biofabrication may allow sensors to achieve the high spatial sensitivity required, and bring us closer to achieving devices with these capabilities. To this end, we review recent advances in biofabrication techniques that may enable cutting-edge biosensors. In particular, we focus on bioprinting techniques (e.g., microcontact printing, inkjet printing, and laser direct-write that may prove pivotal to biosensor fabrication and scaling. Recent biosensors have employed these fabrication techniques with success, and further development may enable higher performance, including multiplexing multiple analytes or cell types within a single biosensor. We also review recent advances in 3D bioprinting, and explore their potential to create biosensors with live cells encapsulated in 3D microenvironments. Such advances in biofabrication will expand biosensor utility and availability, with impact realized in many interdisciplinary fields, as well as in the clinic.

  20. Trends in Flow-based Biosensing Systems for Pesticide Assessment

    Directory of Open Access Journals (Sweden)

    Jean-Louis Marty

    2006-10-01

    Full Text Available This review gives a survey on the state of the art of pesticide detection usingflow-based biosensing systems for sample screening. Although immunosensor systems havebeen proposed as powerful pesticide monitoring tools, this review is mainly focused onenzyme-based biosensors, as they are the most commonly employed when using a flowsystem. Among the different detection methods able to be integrated into flow-injectionanalysis (FIA systems, the electrochemical ones will be treated in more detail, due to theirhigh sensitivity, simple sample pretreatment, easy operational procedures and real-timedetection. During the last decade, new trends have been emerging in order to increase theenzyme stability, the sensitivity and selectivity of the measurements, and to lower thedetection limits. These approaches are based on (i the design of novel matrices for enzymeimmobilisation, (ii new manifold configurations of the FIA system, sometimes includingminiaturisation or lab-on-chip protocols thanks to micromachining technology, (iii the useof cholinesterase enzymes either from various commercial sources or genetically modifiedwith the aim of being more sensitive, (iv the incorporation of other highly specificenzymes, such as organophosphate hydrolase (OPH or parathion hydrolase (PH and (v thecombination of different electrochemical methods of detection. This article discusses thesenovel strategies and their advantages and limitations.

  1. Schottky-contact plasmonic dipole rectenna concept for biosensing.

    Science.gov (United States)

    Alavirad, Mohammad; Mousavi, Saba Siadat; Roy, Langis; Berini, Pierre

    2013-02-25

    Nanoantennas are key optical components for several applications including photodetection and biosensing. Here we present an array of metal nano-dipoles supporting surface plasmon polaritons (SPPs) integrated into a silicon-based Schottky-contact photodetector. Incident photons coupled to the array excite SPPs on the Au nanowires of the antennas which decay by creating "hot" carriers in the metal. The hot carriers may then be injected over the potential barrier at the Au-Si interface resulting in a photocurrent. High responsivities of 100 mA/W and practical minimum detectable powers of -12 dBm should be achievable in the infra-red (1310 nm). The device was then investigated for use as a biosensor by computing its bulk and surface sensitivities. Sensitivities of ∼ 250 nm/RIU (bulk) and ∼ 8 nm/nm (surface) in water are predicted. We identify the mode propagating and resonating along the nanowires of the antennas, we apply a transmission line model to describe the performance of the antennas, and we extract two useful formulas to predict their bulk and surface sensitivities. We prove that the sensitivities of dipoles are much greater than those of similar monopoles and we show that this difference comes from the gap in dipole antennas where electric fields are strongly enhanced.

  2. Stable graphene oxide-gold nanoparticle platforms for biosensing applications.

    Science.gov (United States)

    Hernández-Sánchez, Dania; Villabona-Leal, Giovanny; Saucedo-Orozco, Izcoatl; Bracamonte, Victoria; Pérez, Elías; Bittencourt, Carla; Quintana, Mildred

    2018-01-17

    Graphene oxide-gold nanoparticle (AuNPs@GO) hybrids were fabricated in water dispersions of graphene oxide (GO) and Au precursor completely free of stabilizing agents by UV-light irradiation. Gold nanoparticle (AuNP) nucleation, growth, and stabilization mechanisms at the surface of GO are discussed on the basis of UV-Vis, Raman, IR, and X-Ray photo-spectroscopy studies. The analyses of AuNPs@GO hybrids by transmission electron microscopy (TEM), thermogravimetric (TGA) and electrochemical tests show that they exhibit outstanding chemical, thermal and electrochemical stabilities. Thus, AuNPs@GO biosensing platforms were fabricated for surface enhanced Raman spectroscopy (SERS) detection of crystal violet (CV), a SERS standard molecule, and in a different set of experiments, for flavin adenine dinucleotide (FAD), a flavoprotein coenzyme that plays an important role in many oxidoreductase and reversible redox conversions in biochemical reactions. AuNPs@GO hybrids synthesized by using UV light irradiation show exceptional stability and high intensification of the Raman signals showing that they have high potential for use as biomedical probes for the detection, monitoring, and diagnosis of medical diseases.

  3. Fast Multispectral Radiometry for Particles Analysis

    International Nuclear Information System (INIS)

    Sharon, A.; Halevy, I.; Sattinger, D.; Yaar, I.; Krantz, L.; Pinhas, M.

    2014-01-01

    The radiological risk following detonation of radiological dispersal device (RDD) is highly depends the final particles’ size distribution remains after the detonation. In order to produce a realistic source term for the atmospheric dispersion model we should be able to predict the total fraction of aerosols created after the detonation as well as the respirable part of this fraction. The rest of the particles will not be dispersed downwind and hence them concentration will be calculated using much simpler models. The radiological risk out of radioactive (RA) material is highly depends on the particle size. Respirable size (<10 microns) of Alfa, Beta and Gamma emitters are all dangerous when inhaled into the body while larger aerosolos might be risky from a distance (Gamma emitters) or in an external body contact (Alfa, Beta and Gamma). Larger particles (which are not aerosols) are dangerous as fragments when penetrating the body (Alfa, Beta and Gamma) or when depositing on the ground as Gamma emitters. We show here that by using a fast multispectral radiometryfor the detonation fireball analysis it is possible to quantify the reduction of total amount of aerosols due to particles agglomeration with dirt

  4. Vicarious Calibration of Beijing-1 Multispectral Imagers

    Directory of Open Access Journals (Sweden)

    Zhengchao Chen

    2014-02-01

    Full Text Available For on-orbit calibration of the Beijing-1 multispectral imagers (Beijing-1/MS, a field calibration campaign was performed at the Dunhuang calibration site during September and October of 2008. Based on the in situ data and images from Beijing-1 and Terra/Moderate Resolution Imaging Spectroradiometer (MODIS, three vicarious calibration methods (i.e., reflectance-based, irradiance-based, and cross-calibration were used to calculate the top-of-atmosphere (TOA radiance of Beijing-1. An analysis was then performed to determine or identify systematic and accidental errors, and the overall uncertainty was assessed for each individual method. The findings show that the reflectance-based method has an uncertainty of more than 10% if the aerosol optical depth (AOD exceeds 0.2. The cross-calibration method is able to reach an error level within 7% if the images are selected carefully. The final calibration coefficients were derived from the irradiance-based data for 6 September 2008, with an uncertainty estimated to be less than 5%.

  5. Multispectral Stokes polarimetry for dermatoscopic imaging

    Science.gov (United States)

    Castillejos, Y.; Martínez-Ponce, Geminiano; Mora-Nuñez, Azael; Castro-Sanchez, R.

    2015-12-01

    Most of skin pathologies, including melanoma and basal/squamous cell carcinoma, are related to alterations in external and internal order. Usually, physicians rely on their empirical expertise to diagnose these ills normally assisted with dermatoscopes. When there exists skin cancer suspicion, a cytology or biopsy is made, but both laboratory tests imply an invasive procedure. In this regard, a number of non-invasive optical techniques have been proposed recently to improve the diagnostic certainty and assist in the early detection of cutaneous cancer. Herein, skin optical properties are derived with a multispectral polarimetric dermatoscope using three different illumination wavelength intervals centered at 470, 530 and 635nm. The optical device consist of two polarizing elements, a quarter-wave plate and a linear polarizer, rotating at a different angular velocity and a CCD array as the photoreceiver. The modulated signal provided by a single pixel in the acquired image sequence is analyzed with the aim of computing the Stokes parameters. Changes in polarization state of selected wavelengths provide information about the presence of skin pigments such as melanin and hemoglobin species as well as collagen structure, among other components. These skin attributes determine the local physiology or pathology. From the results, it is concluded that optical polarimetry will provide additional elements to dermatologists in their diagnostic task.

  6. Multispectral imaging of acute wound tissue oxygenation

    Directory of Open Access Journals (Sweden)

    Audrey Huong

    2017-05-01

    Full Text Available This paper investigates the appropriate range of values for the transcutaneous blood oxygen saturation (StO2 of granulating tissues and the surrounding tissue that can ensure timely wound recovery. This work has used a multispectral imaging system to collect wound images at wavelengths ranging between 520nm and 600nm with a resolution of 10nm. As part of this research, a pilot study was conducted on three injured individuals with superficial wounds of different wound ages at different skin locations. The StO2 value predicted for the examined wounds using the Extended Modified Lambert–Beer model revealed a mean StO2 of 61±10.3% compared to 41.6±6.2% at the surrounding tissues, and 50.1±1.53% for control sites. These preliminary results contribute to the existing knowledge on the possible range and variation of wound bed StO2 that are to be used as indicators of the functioning of the vasomotion system and wound health. This study has concluded that a high StO2 of approximately 60% and a large fluctuation in this value should precede a good progression in wound healing.

  7. Mobile phone-based biosensing: An emerging "diagnostic and communication" technology.

    Science.gov (United States)

    Quesada-González, Daniel; Merkoçi, Arben

    2017-06-15

    In this review we discuss recent developments on the use of mobile phones and similar devices for biosensing applications in which diagnostics and communications are coupled. Owing to the capabilities of mobile phones (their cameras, connectivity, portability, etc.) and to advances in biosensing, the coupling of these two technologies is enabling portable and user-friendly analytical devices. Any user can now perform quick, robust and easy (bio)assays anywhere and at any time. Among the most widely reported of such devices are paper-based platforms. Herein we provide an overview of a broad range of biosensing possibilities, from optical to electrochemical measurements; explore the various reported designs for adapters; and consider future opportunities for this technology in fields such as health diagnostics, safety & security, and environment monitoring. Copyright © 2016 Elsevier B.V. All rights reserved.

  8. Color enhancement in multispectral image of human skin

    Science.gov (United States)

    Mitsui, Masanori; Murakami, Yuri; Obi, Takashi; Yamaguchi, Masahiro; Ohyama, Nagaaki

    2003-07-01

    Multispectral imaging is receiving attention in medical color imaging, as high-fidelity color information can be acquired by the multispectral image capturing. On the other hand, as color enhancement in medical color image is effective for distinguishing lesion from normal part, we apply a new technique for color enhancement using multispectral image to enhance the features contained in a certain spectral band, without changing the average color distribution of original image. In this method, to keep the average color distribution, KL transform is applied to spectral data, and only high-order KL coefficients are amplified in the enhancement. Multispectral images of human skin of bruised arm are captured by 16-band multispectral camera, and the proposed color enhancement is applied. The resultant images are compared with the color images reproduced assuming CIE D65 illuminant (obtained by natural color reproduction technique). As a result, the proposed technique successfully visualizes unclear bruised lesions, which are almost invisible in natural color images. The proposed technique will provide support tool for the diagnosis in dermatology, visual examination in internal medicine, nursing care for preventing bedsore, and so on.

  9. Low SWaP multispectral sensors using dichroic filter arrays

    Science.gov (United States)

    Dougherty, John; Varghese, Ron

    2015-06-01

    The benefits of multispectral imaging are well established in a variety of applications including remote sensing, authentication, satellite and aerial surveillance, machine vision, biomedical, and other scientific and industrial uses. However, many of the potential solutions require more compact, robust, and cost-effective cameras to realize these benefits. The next generation of multispectral sensors and cameras needs to deliver improvements in size, weight, power, portability, and spectral band customization to support widespread deployment for a variety of purpose-built aerial, unmanned, and scientific applications. A novel implementation uses micro-patterning of dichroic filters1 into Bayer and custom mosaics, enabling true real-time multispectral imaging with simultaneous multi-band image acquisition. Consistent with color image processing, individual spectral channels are de-mosaiced with each channel providing an image of the field of view. This approach can be implemented across a variety of wavelength ranges and on a variety of detector types including linear, area, silicon, and InGaAs. This dichroic filter array approach can also reduce payloads and increase range for unmanned systems, with the capability to support both handheld and autonomous systems. Recent examples and results of 4 band RGB + NIR dichroic filter arrays in multispectral cameras are discussed. Benefits and tradeoffs of multispectral sensors using dichroic filter arrays are compared with alternative approaches - including their passivity, spectral range, customization options, and scalable production.

  10. A paper based graphene-nanocauliflower hybrid composite for point of care biosensing

    Science.gov (United States)

    Burrs, S. L.; Sidhu, R.; Bhargava, M.; Kiernan-Lewis, J.; Schwalb, N.; Rong, Y.; Gomes, C.; Claussen, J.; Vanegas, D. C.; McLamore, E. S.

    2016-05-01

    Graphene paper has diverse applications in printed circuit board electronics, bioassays, 3D cell culture, and biosensing. Although development of nanometal-graphene hybrid composites is commonplace in the sensing literature, to date there are only a few examples of nanometal-decorated graphene paper for use in biosensing. In this manuscript, we demonstrate the synthesis and application of Pt nano cauliflower-functionalized graphene paper for use in electrochemical biosensing of small molecules (glucose, acetone, methanol) or detection of pathogenic bacteria (Escherichia coli O157:H7). Raman spectroscopy, scanning electron microscopy and energy dispersive spectroscopy were used to show that graphene oxide deposited on nanocellulose crystals was partially reduced by both thermal and chemical treatment. Fractal platinum nanostructures were formed on the reduced graphene oxide paper, producing a conductive paper with an extremely high electroactive surface area, confirmed by cyclic voltammetry and electrochemical impedance spectroscopy. To show the broad applicability of the material, the platinum surface was functionalized with three different biomaterials: 1) glucose oxidase (via chitosan encapsulation); 2) a DNA aptamer (via covalent linking), or 3) a chemosensory protein (via his linking). We demonstrate the application of this device for point of care biosensing. The detection limit for both glucose (0.08 +/- 0.02 μM) and E. coli O157:H7 (1.3 +/- 0.1 CFU mL-1) were competitive with, or superior to, previously reported devices in the biosensing literature. The response time (6 sec for glucose and 10 min for E. coli) were also similar to silicon biochip and commercial electrode sensors. The results demonstrate that the nanocellulose-graphene-nanoplatinum material is an excellent paper-based platform for development of electrochemical biosensors targeting small molecules or whole cells for use in point of care biosensing.

  11. High-throughput automated system for statistical biosensing employing microcantilevers arrays

    DEFF Research Database (Denmark)

    Bosco, Filippo; Chen, Ching H.; Hwu, En T.

    2011-01-01

    In this paper we present a completely new and fully automated system for parallel microcantilever-based biosensing. Our platform is able to monitor simultaneously the change of resonance frequency (dynamic mode), of deflection (static mode), and of surface roughness of hundreds of cantilevers...... in a very short time over multiple biochemical reactions. We have proven that our system is capable to measure 900 independent microsensors in less than a second. Here, we report statistical biosensing results performed over a haptens-antibody assay, where complete characterization of the biochemical...

  12. Ferrocene-functionalized graphene electrode for biosensing applications

    Energy Technology Data Exchange (ETDEWEB)

    Rabti, Amal [Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology, Campus UAB, Bellaterra, 08193 Barcelona (Spain); Université de Tunis El–Manar, Faculté des Sciences de Tunis, Laboratoire de Chimie Analytique et Electrochimie (LR99ES15), Campus universitaire de Tunis El–Manar, 2092, Tunis (Tunisia); Mayorga-Martinez, Carmen C.; Baptista-Pires, Luis [Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology, Campus UAB, Bellaterra, 08193 Barcelona (Spain); Raouafi, Noureddine, E-mail: n.raouafi@fst.rnu.tn [Université de Tunis El–Manar, Faculté des Sciences de Tunis, Laboratoire de Chimie Analytique et Electrochimie (LR99ES15), Campus universitaire de Tunis El–Manar, 2092, Tunis (Tunisia); Merkoçi, Arben, E-mail: arben.merkoci@icn2.cat [Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology, Campus UAB, Bellaterra, 08193 Barcelona (Spain); ICREA, Barcelona, Catalonia (Spain)

    2016-07-05

    A novel ferrocene-functionalized reduced graphene oxide (rGO)-based electrode is proposed. It was fabricated by the drop casting of ferrocene-functionalized graphene onto polyester substrate as the working electrode integrated within screen-printed reference and counter electrodes. The ferrocene-functionalized rGO has been fully characterized using FTIR, XPS, contact angle measurements, SEM and TEM microscopy, and cyclic voltammetry. The XPS and EDX analysis showed the presence of Fe element related to the introduced ferrocene groups, which is confirmed by a clear CV signal at ca. 0.25 V vs. Ag/AgCl (0.1 KCl). Mediated redox catalysis of H{sub 2}O{sub 2} and bio-functionalization with glucose oxidase for glucose detection were achieved by the bioelectrode providing a proof for potential biosensing applications. - Graphical abstract: An easy-to-prepare standalone graphene electrode was obtained by the drop-casting ferrocene-functionalized rGO on PET polymer. This electrode can be used as an enzymeless electrochemical sensor for the detection of hydrogen peroxide or as an amperometric enzyme-based biosensor for sensitive glucose detection. - Highlights: • A novel ferrocene-functionalized reduced graphene oxide based electrode. • Ease of preparation by drop-casting of Fc-modified graphene and chitosan mixture. • Well-defined and exploitable ferrocene CV signal for sensing purposes. • Sensitive enzymeless detection of hydrogen peroxide at low potentials. • Enzymatic Sensitive detection of glucose on GOx-modified graphene electrode.

  13. GaN heterostructures for biosensing and radiation detection

    Energy Technology Data Exchange (ETDEWEB)

    Howgate, John D.

    2012-12-11

    In this thesis I show the results from our investigation of the interface between gallium nitride wide bandgap semiconductor heterostructures and (bio)molecular systems on their surfaces for biosensing, bioelectronics, and photoelectric applications, with a large emphasis on the processes arising from high energy ionizing irradiation, including heterostructure photoelectric gain mechanisms. Wide bandgap semiconductors, such as gallium nitride, have received increasing attention as potential components in advanced organic/inorganic hybrid systems. Working to further this topic, we determine a new semiconductor alignment required for low energy photo-induced charge transfer ionization of alkyl chains well below the energy normally required for molecular cleavage, show original results of the influence of binding methods on enzyme functionality in conjunction with a novel electrochemical and environmental control system and demonstrate new possibilities to significantly improve upon pH measurements through the use of high sensitivity devices. Furthermore, based on the extension of this work to support future studies of radiation effects on cell systems, we present a detailed characterization of new simultaneous chemical sensing and ionizing radiation dosimetry using single devices. We found that their pH sensitivity was retained during X-ray irradiation and that the fundamental characteristics can be used to separate the irradiation signal from the pH response without compromising operational stability. These data provide clear indications of the separate response mechanism tied to the presence of a two-dimensional electron gas channel. Here, we found new results exhibiting exceptionally high gains and independence of the well-known persistent photoconductivity for soft X-rays and high energy particles in the ultralow dose-rate regime. This material system provides the capability for high sensitivity and resolution real time monitoring, which is competitive with and

  14. Sol-gel encapsulation for controlled drug release and biosensing

    Science.gov (United States)

    Fang, Jonathan

    The main focus of this dissertation is to investigate the use of sol-gel encapsulation of biomolecules for controlled drug release and biosensing. Controlled drug release has advantages over conventional therapies in that it maintains a constant, therapeutic drug level in the body for prolonged periods of time. The anti-hypertensive drug Captopril was encapsulated in sol-gel materials of various forms, such as silica xerogels and nanoparticles. The primary objective was to show that sol-gel silica materials are promising drug carriers for controlled release by releasing Captopril at a release rate that is within a therapeutic range. We were able to demonstrate desired release for over a week from Captopril-doped silica xerogels and overall release from Captopril-doped silica nanoparticles. As an aside, the antibiotic Vancomycin was also encapsulated in these porous silica nanoparticles and desired release was obtained for several days in-vitro. The second part of the dissertation focuses on immobilizing antibodies and proteins in sol-gel to detect various analytes, such as hormones and amino acids. Sol-gel competitive immunoassays on antibody-doped silica xerogels were used for hormone detection. Calibration for insulin and C-peptide in standard solutions was obtained in the nM range. In addition, NASA-Ames is also interested in developing a reagentless biosensor using bacterial periplasmic binding proteins (bPBPs) to detect specific biomarkers, such as amino acids and phosphate. These bPBPs were doubly labeled with two different fluorophores and encapsulated in silica xerogels. Ligand-binding experiments were performed on the bPBPs in solution and in sol-gel. Ligand-binding was monitored by fluorescence resonance energy transfer (FRET) between the two fluorophores on the bPBP. Titration data show that one bPBP has retained its ligand-binding properties in sol-gel.

  15. Ferrocene-functionalized graphene electrode for biosensing applications

    International Nuclear Information System (INIS)

    Rabti, Amal; Mayorga-Martinez, Carmen C.; Baptista-Pires, Luis; Raouafi, Noureddine; Merkoçi, Arben

    2016-01-01

    A novel ferrocene-functionalized reduced graphene oxide (rGO)-based electrode is proposed. It was fabricated by the drop casting of ferrocene-functionalized graphene onto polyester substrate as the working electrode integrated within screen-printed reference and counter electrodes. The ferrocene-functionalized rGO has been fully characterized using FTIR, XPS, contact angle measurements, SEM and TEM microscopy, and cyclic voltammetry. The XPS and EDX analysis showed the presence of Fe element related to the introduced ferrocene groups, which is confirmed by a clear CV signal at ca. 0.25 V vs. Ag/AgCl (0.1 KCl). Mediated redox catalysis of H_2O_2 and bio-functionalization with glucose oxidase for glucose detection were achieved by the bioelectrode providing a proof for potential biosensing applications. - Graphical abstract: An easy-to-prepare standalone graphene electrode was obtained by the drop-casting ferrocene-functionalized rGO on PET polymer. This electrode can be used as an enzymeless electrochemical sensor for the detection of hydrogen peroxide or as an amperometric enzyme-based biosensor for sensitive glucose detection. - Highlights: • A novel ferrocene-functionalized reduced graphene oxide based electrode. • Ease of preparation by drop-casting of Fc-modified graphene and chitosan mixture. • Well-defined and exploitable ferrocene CV signal for sensing purposes. • Sensitive enzymeless detection of hydrogen peroxide at low potentials. • Enzymatic Sensitive detection of glucose on GOx-modified graphene electrode.

  16. GaN heterostructures for biosensing and radiation detection

    International Nuclear Information System (INIS)

    Howgate, John D.

    2012-01-01

    In this thesis I show the results from our investigation of the interface between gallium nitride wide bandgap semiconductor heterostructures and (bio)molecular systems on their surfaces for biosensing, bioelectronics, and photoelectric applications, with a large emphasis on the processes arising from high energy ionizing irradiation, including heterostructure photoelectric gain mechanisms. Wide bandgap semiconductors, such as gallium nitride, have received increasing attention as potential components in advanced organic/inorganic hybrid systems. Working to further this topic, we determine a new semiconductor alignment required for low energy photo-induced charge transfer ionization of alkyl chains well below the energy normally required for molecular cleavage, show original results of the influence of binding methods on enzyme functionality in conjunction with a novel electrochemical and environmental control system and demonstrate new possibilities to significantly improve upon pH measurements through the use of high sensitivity devices. Furthermore, based on the extension of this work to support future studies of radiation effects on cell systems, we present a detailed characterization of new simultaneous chemical sensing and ionizing radiation dosimetry using single devices. We found that their pH sensitivity was retained during X-ray irradiation and that the fundamental characteristics can be used to separate the irradiation signal from the pH response without compromising operational stability. These data provide clear indications of the separate response mechanism tied to the presence of a two-dimensional electron gas channel. Here, we found new results exhibiting exceptionally high gains and independence of the well-known persistent photoconductivity for soft X-rays and high energy particles in the ultralow dose-rate regime. This material system provides the capability for high sensitivity and resolution real time monitoring, which is competitive with and

  17. Feasibility in multispectral imaging for predicting the content of bioactive compounds in intact tomato fruit.

    Science.gov (United States)

    Liu, Changhong; Liu, Wei; Chen, Wei; Yang, Jianbo; Zheng, Lei

    2015-04-15

    Tomato is an important health-stimulating fruit because of the antioxidant properties of its main bioactive compounds, dominantly lycopene and phenolic compounds. Nowadays, product differentiation in the fruit market requires an accurate evaluation of these value-added compounds. An experiment was conducted to simultaneously and non-destructively measure lycopene and phenolic compounds content in intact tomatoes using multispectral imaging combined with chemometric methods. Partial least squares (PLS), least squares-support vector machines (LS-SVM) and back propagation neural network (BPNN) were applied to develop quantitative models. Compared with PLS and LS-SVM, BPNN model considerably improved the performance with coefficient of determination in prediction (RP(2))=0.938 and 0.965, residual predictive deviation (RPD)=4.590 and 9.335 for lycopene and total phenolics content prediction, respectively. It is concluded that multispectral imaging is an attractive alternative to the standard methods for determination of bioactive compounds content in intact tomatoes, providing a useful platform for infield fruit sorting/grading. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Weight Multispectral Reconstruction Strategy for Enhanced Reconstruction Accuracy and Stability With Cerenkov Luminescence Tomography.

    Science.gov (United States)

    Hongbo Guo; Xiaowei He; Muhan Liu; Zeyu Zhang; Zhenhua Hu; Jie Tian

    2017-06-01

    Cerenkov luminescence tomography (CLT) provides a novel technique for 3-D noninvasive detection of radiopharmaceuticals in living subjects. However, because of the severe scattering of Cerenkov light, the reconstruction accuracy and stability of CLT is still unsatisfied. In this paper, a modified weight multispectral CLT (wmCLT) reconstruction strategy was developed which split the Cerenkov radiation spectrum into several sub-spectral bands and weighted the sub-spectral results to obtain the final result. To better evaluate the property of the wmCLT reconstruction strategy in terms of accuracy, stability and practicability, several numerical simulation experiments and in vivo experiments were conducted and the results obtained were compared with the traditional multispectral CLT (mCLT) and hybrid-spectral CLT (hCLT) reconstruction strategies. The numerical simulation results indicated that wmCLT strategy significantly improved the accuracy of Cerenkov source localization and intensity quantitation and exhibited good stability in suppressing noise in numerical simulation experiments. And the comparison of the results achieved from different in vivo experiments further indicated significant improvement of the wmCLT strategy in terms of the shape recovery of the bladder and the spatial resolution of imaging xenograft tumors. Overall the strategy reported here will facilitate the development of nuclear and optical molecular tomography in theoretical study.

  19. Geometric Calibration and Radiometric Correction of the Maia Multispectral Camera

    Science.gov (United States)

    Nocerino, E.; Dubbini, M.; Menna, F.; Remondino, F.; Gattelli, M.; Covi, D.

    2017-10-01

    Multispectral imaging is a widely used remote sensing technique, whose applications range from agriculture to environmental monitoring, from food quality check to cultural heritage diagnostic. A variety of multispectral imaging sensors are available on the market, many of them designed to be mounted on different platform, especially small drones. This work focuses on the geometric and radiometric characterization of a brand-new, lightweight, low-cost multispectral camera, called MAIA. The MAIA camera is equipped with nine sensors, allowing for the acquisition of images in the visible and near infrared parts of the electromagnetic spectrum. Two versions are available, characterised by different set of band-pass filters, inspired by the sensors mounted on the WorlView-2 and Sentinel2 satellites, respectively. The camera details and the developed procedures for the geometric calibrations and radiometric correction are presented in the paper.

  20. Evaluation of non-invasive multispectral imaging as a tool for measuring the effect of systemic therapy in Kaposi sarcoma.

    Directory of Open Access Journals (Sweden)

    Jana M Kainerstorfer

    Full Text Available Diffuse multi-spectral imaging has been evaluated as a potential non-invasive marker of tumor response. Multi-spectral images of Kaposi sarcoma skin lesions were taken over the course of treatment, and blood volume and oxygenation concentration maps were obtained through principal component analysis (PCA of the data. These images were compared with clinical and pathological responses determined by conventional means. We demonstrate that cutaneous lesions have increased blood volume concentration and that changes in this parameter are a reliable indicator of treatment efficacy, differentiating responders and non-responders. Blood volume decreased by at least 20% in all lesions that responded by clinical criteria and increased in the two lesions that did not respond clinically. Responses as assessed by multi-spectral imaging also generally correlated with overall patient clinical response assessment, were often detectable earlier in the course of therapy, and are less subject to observer variability than conventional clinical assessment. Tissue oxygenation was more variable, with lesions often showing decreased oxygenation in the center surrounded by a zone of increased oxygenation. This technique could potentially be a clinically useful supplement to existing response assessment in KS, providing an early, quantitative, and non-invasive marker of treatment effect.

  1. Compact multispectral photodiode arrays using micropatterned dichroic filters

    Science.gov (United States)

    Chandler, Eric V.; Fish, David E.

    2014-05-01

    The next generation of multispectral instruments requires significant improvements in both spectral band customization and portability to support the widespread deployment of application-specific optical sensors. The benefits of spectroscopy are well established for numerous applications including biomedical instrumentation, industrial sorting and sensing, chemical detection, and environmental monitoring. In this paper, spectroscopic (and by extension hyperspectral) and multispectral measurements are considered. The technology, tradeoffs, and application fits of each are evaluated. In the majority of applications, monitoring 4-8 targeted spectral bands of optimized wavelength and bandwidth provides the necessary spectral contrast and correlation. An innovative approach integrates precision spectral filters at the photodetector level to enable smaller sensors, simplify optical designs, and reduce device integration costs. This method supports user-defined spectral bands to create application-specific sensors in a small footprint with scalable cost efficiencies. A range of design configurations, filter options and combinations are presented together with typical applications ranging from basic multi-band detection to stringent multi-channel fluorescence measurement. An example implementation packages 8 narrowband silicon photodiodes into a 9x9mm ceramic LCC (leadless chip carrier) footprint. This package is designed for multispectral applications ranging from portable color monitors to purpose- built OEM industrial and scientific instruments. Use of an eight-channel multispectral photodiode array typically eliminates 10-20 components from a device bill-of-materials (BOM), streamlining the optical path and shrinking the footprint by 50% or more. A stepwise design approach for multispectral sensors is discussed - including spectral band definition, optical design tradeoffs and constraints, and device integration from prototype through scalable volume production

  2. Lossless compression of multispectral images using spectral information

    Science.gov (United States)

    Ma, Long; Shi, Zelin; Tang, Xusheng

    2009-10-01

    Multispectral images are available for different purposes due to developments in spectral imaging systems. The sizes of multispectral images are enormous. Thus transmission and storage of these volumes of data require huge time and memory resources. That is why compression algorithms must be developed. A salient property of multispectral images is that strong spectral correlation exists throughout almost all bands. This fact is successfully used to predict each band based on the previous bands. We propose to use spectral linear prediction and entropy coding with context modeling for encoding multispectral images. Linear prediction predicts the value for the next sample and computes the difference between predicted value and the original value. This difference is usually small, so it can be encoded with less its than the original value. The technique implies prediction of each image band by involving number of bands along the image spectra. Each pixel is predicted using information provided by pixels in the previous bands in the same spatial position. As done in the JPEG-LS, the proposed coder also represents the mapped residuals by using an adaptive Golomb-Rice code with context modeling. This residual coding is context adaptive, where the context used for the current sample is identified by a context quantization function of the three gradients. Then, context-dependent Golomb-Rice code and bias parameters are estimated sample by sample. The proposed scheme was compared with three algorithms applied to the lossless compression of multispectral images, namely JPEG-LS, Rice coding, and JPEG2000. Simulation tests performed on AVIRIS images have demonstrated that the proposed compression scheme is suitable for multispectral images.

  3. Multi-spectral endogenous fluorescence imaging for bacterial differentiation

    Science.gov (United States)

    Chernomyrdin, Nikita V.; Babayants, Margarita V.; Korotkov, Oleg V.; Kudrin, Konstantin G.; Rimskaya, Elena N.; Shikunova, Irina A.; Kurlov, Vladimir N.; Cherkasova, Olga P.; Komandin, Gennady A.; Reshetov, Igor V.; Zaytsev, Kirill I.

    2017-07-01

    In this paper, the multi-spectral endogenous fluorescence imaging was implemented for bacterial differentiation. The fluorescence imaging was performed using a digital camera equipped with a set of visual bandpass filters. Narrowband 365 nm ultraviolet radiation passed through a beam homogenizer was used to excite the sample fluorescence. In order to increase a signal-to-noise ratio and suppress a non-fluorescence background in images, the intensity of the UV excitation was modulated using a mechanical chopper. The principal components were introduced for differentiating the samples of bacteria based on the multi-spectral endogenous fluorescence images.

  4. Fusion of multispectral and panchromatic images using multirate filter banks

    Institute of Scientific and Technical Information of China (English)

    Wang Hong; Jing Zhongliang; Li Jianxun

    2005-01-01

    In this paper, an image fusion method based on the filter banks is proposed for merging a high-resolution panchromatic image and a low-resolution multispectral image. Firstly, the filter banks are designed to merge different signals with minimum distortion by using cosine modulation. Then, the filter banks-based image fusion is adopted to obtain a high-resolution multispectral image that combines the spectral characteristic of low-resolution data with the spatial resolution of the panchromatic image. Finally, two different experiments and corresponding performance analysis are presented. Experimental results indicate that the proposed approach outperforms the HIS transform, discrete wavelet transform and discrete wavelet frame.

  5. Multi-spectral band selection for satellite-based systems

    International Nuclear Information System (INIS)

    Clodius, W.B.; Weber, P.G.; Borel, C.C.; Smith, B.W.

    1998-01-01

    The design of satellite based multispectral imaging systems requires the consideration of a number of tradeoffs between cost and performance. The authors have recently been involved in the design and evaluation of a satellite based multispectral sensor operating from the visible through the long wavelength IR. The criteria that led to some of the proposed designs and the modeling used to evaluate and fine tune the designs will both be discussed. These criteria emphasized the use of bands for surface temperature retrieval and the correction of atmospheric effects. The impact of cost estimate changes on the final design will also be discussed

  6. Multispectral image pansharpening based on the contourlet transform

    Energy Technology Data Exchange (ETDEWEB)

    Amro, Israa; Mateos, Javier, E-mail: iamro@correo.ugr.e, E-mail: jmd@decsai.ugr.e [Departamento de Ciencias de la Computacion e I.A., Universidad de Granada, 18071 Granada (Spain)

    2010-02-01

    Pansharpening is a technique that fuses the information of a low resolution multispectral image (MS) and a high resolution panchromatic image (PAN), usually remote sensing images, to provide a high resolution multispectral image. In the literature, this task has been addressed from different points of view being one of the most popular the wavelets based algorithms. Recently, the contourlet transform has been proposed. This transform combines the advantages of the wavelets transform with a more efficient directional information representation. In this paper we propose a new pansharpening method based on contourlets, compare with its wavelet counterpart and assess its performance numerically and visually.

  7. Influence of surface defects in ZnO thin films on its biosensing response characteristic

    Energy Technology Data Exchange (ETDEWEB)

    Saha, Shibu; Gupta, Vinay [Department of Physics and Astrophysics, University of Delhi, Delhi-110007 (India)

    2011-09-15

    Highly c-axis oriented zinc oxide (ZnO) thin films deposited by rf magnetron sputtering under varying processing pressure (20-50 mT) in a reactive gas mixture of argon and oxygen were studied for biosensing application. The as-deposited ZnO thin films were in a state of compressive stress having defects related to interstitial Zn and antisite oxygen. Glucose oxidase has been chosen as the model enzyme in the present study and was immobilized on the surface of ZnO thin films deposited on indium tin oxide coated Corning Glass substrate. The studies reveal a correlation between the biosensing characteristic and the presence of defects in the ZnO films. The ZnO films deposited under high pressure (50 mT) are found to be more sensitive for biosensing application due to availability of more surface area for effective immobilization of biomolecules and exhibits a suitable microenvironment with good electron transfer characteristic. The obtained results highlight the importance of desired microstate besides availability of suitable native defects in the ZnO thin film for exhibiting enhanced biosensing response.

  8. Bioengineering of Solution Processed Graphene for the Development of Ultrasensitive Flexible Biosensing Platform

    DEFF Research Database (Denmark)

    Halder, Arnab; Hemanth, Suhith; Keller, Stephan Sylvest

    2016-01-01

    Development of low-cost, flexible and ultrasensitive biosensing platforms for rapid detection of different human metabolites is of great importance for the healthcare, pharmaceuticals and biomedical diagnostics sectors. Synthesis of novel functionalized nanomaterials with high surface area is a key...

  9. Sensitivity of photonic crystal fiber grating sensors: biosensing, refractive index, strain, and temperature sensing

    DEFF Research Database (Denmark)

    Rindorf, Lars Henning; Bang, Ole

    2008-01-01

    We study the sensitivity of fiber grating sensors in the applications of strain, temperature, internal label-free biosensing, and internal refractive index sensing. New analytical expressions for the sensitivities, valid for photonic crystal fibers are rigorously derived. These are generally vali...

  10. Protein biomarker enrichment by biomarker antibody complex elution for immunoassay biosensing

    NARCIS (Netherlands)

    Sabatté, G.S.; Feitsma, H.; Evers, T.H.; Prins, M.W.J.

    2011-01-01

    It is very challenging to perform sample enrichment for protein biomarkers because proteins can easily change conformation and denature. In this paper we demonstrate protein enrichment suited for high-sensitivity integrated immuno-biosensing. The method enhances the concentration of the biomarkers

  11. Influence of surface defects in ZnO thin films on its biosensing response characteristic

    International Nuclear Information System (INIS)

    Saha, Shibu; Gupta, Vinay

    2011-01-01

    Highly c-axis oriented zinc oxide (ZnO) thin films deposited by rf magnetron sputtering under varying processing pressure (20-50 mT) in a reactive gas mixture of argon and oxygen were studied for biosensing application. The as-deposited ZnO thin films were in a state of compressive stress having defects related to interstitial Zn and antisite oxygen. Glucose oxidase has been chosen as the model enzyme in the present study and was immobilized on the surface of ZnO thin films deposited on indium tin oxide coated Corning Glass substrate. The studies reveal a correlation between the biosensing characteristic and the presence of defects in the ZnO films. The ZnO films deposited under high pressure (50 mT) are found to be more sensitive for biosensing application due to availability of more surface area for effective immobilization of biomolecules and exhibits a suitable microenvironment with good electron transfer characteristic. The obtained results highlight the importance of desired microstate besides availability of suitable native defects in the ZnO thin film for exhibiting enhanced biosensing response.

  12. Poly (N-isopropylacrylamide Microgel-Based Optical Devices for Sensing and Biosensing

    Directory of Open Access Journals (Sweden)

    Molla R. Islam

    2014-05-01

    Full Text Available Responsive polymer-based materials have found numerous applications due to their ease of synthesis and the variety of stimuli that they can be made responsive to. In this review, we highlight the group’s efforts utilizing thermoresponsive poly (N-isopropylacrylamide (pNIPAm microgel-based optical devices for various sensing and biosensing applications.

  13. IC Compatible Wafer Level Fabrication of Silicon Nanowire Field Effect Transistors for Biosensing Applications

    NARCIS (Netherlands)

    Moh, T.S.Y.

    2013-01-01

    In biosensing, nano-devices such as Silicon Nanowire Field Effect Transistors (SiNW FETs) are promising components/sensors for ultra-high sensitive detection, especially when samples are low in concentration or a limited volume is available. Current processing of SiNW FETs often relies on expensive

  14. Multispectral imaging based on a Smartphone with an external C-MOS camera for detection of seborrheic dermatitis on the scalp

    Science.gov (United States)

    Kim, Manjae; Kim, Sewoong; Hwang, Minjoo; Kim, Jihun; Je, Minkyu; Jang, Jae Eun; Lee, Dong Hun; Hwang, Jae Youn

    2017-02-01

    To date, the incident rates of various skin diseases have increased due to hereditary and environmental factors including stress, irregular diet, pollution, etc. Among these skin diseases, seborrheic dermatitis and psoriasis are a chronic/relapsing dermatitis involving infection and temporary alopecia. However, they typically exhibit similar symptoms, thus resulting in difficulty in discrimination between them. To prevent their associated complications and appropriate treatments for them, it is crucial to discriminate between seborrheic dermatitis and psoriasis with high specificity and sensitivity and further continuously/quantitatively to monitor the skin lesions during their treatment at other locations besides a hospital. Thus, we here demonstrate a mobile multispectral imaging system connected to a smartphone for selfdiagnosis of seborrheic dermatitis and further discrimination between seborrheic dermatitis and psoriasis on the scalp, which is the more challenging case. Using the system developed, multispectral imaging and analysis of seborrheic dermatitis and psoriasis on the scalp was carried out. It was here found that the spectral signatures of seborrheic dermatitis and psoriasis were discernable and thus seborrheic dermatitis on the scalp could be distinguished from psoriasis by using the system. In particular, the smartphone-based multispectral imaging and analysis moreover offered better discrimination between seborrheic dermatitis and psoriasis than the RGB imaging and analysis. These results suggested that the multispectral imaging system based on a smartphone has the potential for self-diagnosis of seborrheic dermatitis with high portability and specificity.

  15. Potential of multispectral imaging technology for rapid and non-destructive determination of the microbiological quality of beef filets during aerobic storage

    DEFF Research Database (Denmark)

    Panagou, Efstathios Z.; Papadopoulou, Olga; Carstensen, Jens Michael

    2014-01-01

    counts, namely Class 1 (TVC7.0log10CFU/g). Furthermore, PLS regression models were developed to provide quantitative estimations of microbial counts during meat storage. In both cases model validation was implemented with independent experiments at intermediate storage temperatures (2 and 10°C) using....... thermosphacta, and TVC, respectively. The results indicated that multispectral vision technology has significant potential as a rapid and non-destructive technique in assessing the microbiological quality of beef fillets....

  16. [Responses of vegetation changes to climatic variations in Panxi area based on the MODIS multispectral data].

    Science.gov (United States)

    Shao, Huai-Yong; Wu, Jin-Hui; Liu, Meng; Yang, Wu-Nian

    2014-01-01

    It is an important research area to quantitatively studying the relationship between global climatic change and vegetation change based on the remote sensing technology. Panxi area is the ecological barrier of the upper reaches of the Yangtze River, and it is essential for the stability of the ecological environment of Sichuan as well as that of the whole China. The present article analyzes the vegetation change in 2001-2008 and the relationship between vegetation change and climatic variations of Panxi area, based on MODIS multispectral data and meteorological data. The results indicate that NDVI is positively correlated with temperature and precipitation. The precipitation is the major factor that affects the change of vegetation in the Panxi region and the trend of NDVI is similar with autumn precipitation; while at the same time the influence of climate has a one-month-time-lag.

  17. Multi-spectral Image Analysis for Astaxanthin Coating Classification

    DEFF Research Database (Denmark)

    Ljungqvist, Martin Georg; Ersbøll, Bjarne Kjær; Nielsen, Michael Engelbrecht

    2011-01-01

    Industrial quality inspection using image analysis on astaxanthin coating in aquaculture feed pellets is of great importance for automatic production control. In this study multi-spectral image analysis of pellets was performed using LDA, QDA, SNV and PCA on pixel level and mean value of pixels...

  18. Using multi-spectral sensors for vegetation mapping

    CSIR Research Space (South Africa)

    Van Deventer, Heidi

    2016-07-01

    Full Text Available Wetland and estuarine vegetation is often difficult to detect and separate from adjacent land covers with multispectral sensors for a number of reasons. The spatial resolution of space-borne sensors is often insufficient for these features which...

  19. Quality assessment of butter cookies applying multispectral imaging

    DEFF Research Database (Denmark)

    Stenby Andresen, Mette; Dissing, Bjørn Skovlund; Løje, Hanne

    2013-01-01

    calculated for a statistical prediction model correlating multispectral images with a browning score. The browning score is calculated as a function of oven temperature and baking time. It is presented as a quadratic response surface. The investigated process window was the intervals 4–16 min and 160–200°C...

  20. A Novel Perceptual Hash Algorithm for Multispectral Image Authentication

    Directory of Open Access Journals (Sweden)

    Kaimeng Ding

    2018-01-01

    Full Text Available The perceptual hash algorithm is a technique to authenticate the integrity of images. While a few scholars have worked on mono-spectral image perceptual hashing, there is limited research on multispectral image perceptual hashing. In this paper, we propose a perceptual hash algorithm for the content authentication of a multispectral remote sensing image based on the synthetic characteristics of each band: firstly, the multispectral remote sensing image is preprocessed with band clustering and grid partition; secondly, the edge feature of the band subsets is extracted by band fusion-based edge feature extraction; thirdly, the perceptual feature of the same region of the band subsets is compressed and normalized to generate the perceptual hash value. The authentication procedure is achieved via the normalized Hamming distance between the perceptual hash value of the recomputed perceptual hash value and the original hash value. The experiments indicated that our proposed algorithm is robust compared to content-preserved operations and it efficiently authenticates the integrity of multispectral remote sensing images.

  1. Multispectral Imaging of Meat Quality - Color and Texture

    DEFF Research Database (Denmark)

    Trinderup, Camilla Himmelstrup

    transformations to the CIELAB color space, the common color space within food science. The results show that meat color assessment with a multispectral imaging is a great alternative to the traditional colorimeter, i.e. the vision system meets some of the limitations that the colorimeter possesses. To mention one...

  2. Multi-spectral lifetime imaging: methods and applications

    NARCIS (Netherlands)

    Fereidouni, F.

    2013-01-01

    The aim of this PhD project is to further develop multispectral life time imaging hardware and analyses methods. The hardware system, Lambda-Tau, generates a considerable amount of data at high speed. To fully exploit the power of this new hardware, fast and reliable data analyses methods are

  3. Multispectral linear array (MLA) focal plane mechanical and thermal design

    Science.gov (United States)

    Mitchell, A. S.; Kaminski, E. F.

    1982-01-01

    The mechanical and thermal design of an integrated focal plane subsystem of a Multispectral Linear Array (MLA) instrument is discussed in terms of focal-plane alignment, thermoelastic performance, and thermal requirements. The modular construction and thermal control of the focal plane array are discussed.

  4. Viability Prediction of Ricinus cummunis L. Seeds Using Multispectral Imaging

    DEFF Research Database (Denmark)

    Olesen, Merete Halkjær; Nikneshan, Pejman; Shrestha, Santosh

    2015-01-01

    The purpose of this study was to highlight the use of multispectral imaging in seed quality testing of castor seeds. Visually, 120 seeds were divided into three classes: yellow, grey and black seeds. Thereafter, images at 19 different wavelengths ranging from 375–970 nm were captured of all the s...

  5. Wetland Vegetation Integrity Assessment with Low Altitude Multispectral Uav Imagery

    Science.gov (United States)

    Boon, M. A.; Tesfamichael, S.

    2017-08-01

    The use of multispectral sensors on Unmanned Aerial Vehicles (UAVs) was until recently too heavy and bulky although this changed in recent times and they are now commercially available. The focus on the usage of these sensors is mostly directed towards the agricultural sector where the focus is on precision farming. Applications of these sensors for mapping of wetland ecosystems are rare. Here, we evaluate the performance of low altitude multispectral UAV imagery to determine the state of wetland vegetation in a localised spatial area. Specifically, NDVI derived from multispectral UAV imagery was used to inform the determination of the integrity of the wetland vegetation. Furthermore, we tested different software applications for the processing of the imagery. The advantages and disadvantages we experienced of these applications are also shortly presented in this paper. A JAG-M fixed-wing imaging system equipped with a MicaScene RedEdge multispectral camera were utilised for the survey. A single surveying campaign was undertaken in early autumn of a 17 ha study area at the Kameelzynkraal farm, Gauteng Province, South Africa. Structure-from-motion photogrammetry software was used to reconstruct the camera position's and terrain features to derive a high resolution orthoretified mosaic. MicaSense Atlas cloud-based data platform, Pix4D and PhotoScan were utilised for the processing. The WET-Health level one methodology was followed for the vegetation assessment, where wetland health is a measure of the deviation of a wetland's structure and function from its natural reference condition. An on-site evaluation of the vegetation integrity was first completed. Disturbance classes were then mapped using the high resolution multispectral orthoimages and NDVI. The WET-Health vegetation module completed with the aid of the multispectral UAV products indicated that the vegetation of the wetland is largely modified ("D" PES Category) and that the condition is expected to

  6. Multi-spectral confocal microendoscope for in-vivo imaging

    Science.gov (United States)

    Rouse, Andrew Robert

    The concept of in-vivo multi-spectral confocal microscopy is introduced. A slit-scanning multi-spectral confocal microendoscope (MCME) was built to demonstrate the technique. The MCME employs a flexible fiber-optic catheter coupled to a custom built slit-scan confocal microscope fitted with a custom built imaging spectrometer. The catheter consists of a fiber-optic imaging bundle linked to a miniature objective and focus assembly. The design and performance of the miniature objective and focus assembly are discussed. The 3mm diameter catheter may be used on its own or routed though the instrument channel of a commercial endoscope. The confocal nature of the system provides optical sectioning with 3mum lateral resolution and 30mum axial resolution. The prism based multi-spectral detection assembly is typically configured to collect 30 spectral samples over the visible chromatic range. The spectral sampling rate varies from 4nm/pixel at 490nm to 8nm/pixel at 660nm and the minimum resolvable wavelength difference varies from 7nm to 18nm over the same spectral range. Each of these characteristics are primarily dictated by the dispersive power of the prism. The MCME is designed to examine cellular structures during optical biopsy and to exploit the diagnostic information contained within the spectral domain. The primary applications for the system include diagnosis of disease in the gastro-intestinal tract and female reproductive system. Recent data from the grayscale imaging mode are presented. Preliminary multi-spectral results from phantoms, cell cultures, and excised human tissue are presented to demonstrate the potential of in-vivo multi-spectral imaging.

  7. Semiconductor Laser Multi-Spectral Sensing and Imaging

    Directory of Open Access Journals (Sweden)

    Han Q. Le

    2010-01-01

    Full Text Available Multi-spectral laser imaging is a technique that can offer a combination of the laser capability of accurate spectral sensing with the desirable features of passive multispectral imaging. The technique can be used for detection, discrimination, and identification of objects by their spectral signature. This article describes and reviews the development and evaluation of semiconductor multi-spectral laser imaging systems. Although the method is certainly not specific to any laser technology, the use of semiconductor lasers is significant with respect to practicality and affordability. More relevantly, semiconductor lasers have their own characteristics; they offer excellent wavelength diversity but usually with modest power. Thus, system design and engineering issues are analyzed for approaches and trade-offs that can make the best use of semiconductor laser capabilities in multispectral imaging. A few systems were developed and the technique was tested and evaluated on a variety of natural and man-made objects. It was shown capable of high spectral resolution imaging which, unlike non-imaging point sensing, allows detecting and discriminating objects of interest even without a priori spectroscopic knowledge of the targets. Examples include material and chemical discrimination. It was also shown capable of dealing with the complexity of interpreting diffuse scattered spectral images and produced results that could otherwise be ambiguous with conventional imaging. Examples with glucose and spectral imaging of drug pills were discussed. Lastly, the technique was shown with conventional laser spectroscopy such as wavelength modulation spectroscopy to image a gas (CO. These results suggest the versatility and power of multi-spectral laser imaging, which can be practical with the use of semiconductor lasers.

  8. Semiconductor laser multi-spectral sensing and imaging.

    Science.gov (United States)

    Le, Han Q; Wang, Yang

    2010-01-01

    Multi-spectral laser imaging is a technique that can offer a combination of the laser capability of accurate spectral sensing with the desirable features of passive multispectral imaging. The technique can be used for detection, discrimination, and identification of objects by their spectral signature. This article describes and reviews the development and evaluation of semiconductor multi-spectral laser imaging systems. Although the method is certainly not specific to any laser technology, the use of semiconductor lasers is significant with respect to practicality and affordability. More relevantly, semiconductor lasers have their own characteristics; they offer excellent wavelength diversity but usually with modest power. Thus, system design and engineering issues are analyzed for approaches and trade-offs that can make the best use of semiconductor laser capabilities in multispectral imaging. A few systems were developed and the technique was tested and evaluated on a variety of natural and man-made objects. It was shown capable of high spectral resolution imaging which, unlike non-imaging point sensing, allows detecting and discriminating objects of interest even without a priori spectroscopic knowledge of the targets. Examples include material and chemical discrimination. It was also shown capable of dealing with the complexity of interpreting diffuse scattered spectral images and produced results that could otherwise be ambiguous with conventional imaging. Examples with glucose and spectral imaging of drug pills were discussed. Lastly, the technique was shown with conventional laser spectroscopy such as wavelength modulation spectroscopy to image a gas (CO). These results suggest the versatility and power of multi-spectral laser imaging, which can be practical with the use of semiconductor lasers.

  9. A lanthanide complex with dual biosensing properties: CEST (chemical exchange saturation transfer) and BIRDS (biosensor imaging of redundant deviation in shifts) with europium DOTA-tetraglycinate.

    Science.gov (United States)

    Coman, Daniel; Kiefer, Garry E; Rothman, Douglas L; Sherry, A Dean; Hyder, Fahmeed

    2011-12-01

    Responsive contrast agents (RCAs) composed of lanthanide(III) ion (Ln3R) complexes with a variety of1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetate (DOTA4S) derivatives have shown great potential as molecular imaging agents for MR. A variety of LnDOTA–tetraamide complexes have been demonstrated as RCAs for molecular imaging using chemical exchange saturation transfer (CEST). The CEST method detects proton exchange between bulk water and any exchangeable sites on the ligand itself or an inner sphere of bound water that is shifted by a paramagnetic Ln3R ion bound in the core of the macrocycle. It has also been shown that molecular imaging is possible when the RCA itself is observed (i.e. not its effect on bulk water) using a method called biosensor imaging of redundant deviation in shifts (BIRDS). The BIRDS method utilizes redundant information stored in the nonexchangeable proton resonances emanating from the paramagnetic RCA for ambient factors such as temperature and/or pH.Thus, CEST and BIRDS rely on exchangeable and nonexchangeable protons, respectively, for biosensing. We posited that it would be feasible to combine these two biosensing features into the same RCA (i.e. dual CEST and BIRDS properties). A complex between europium(III) ion (Eu3R) and DOTA–tetraglycinate [DOTA–(gly)S4] was used to demonstrate that its CEST characteristics are preserved, while its BIRDS properties are also detectable. The in vitro temperature sensitivity of EuDOTA–(gly)S4 was used to show that qualitative MR contrast with CEST can be calibrated using quantitative MR mapping with BIRDS, thereby enabling quantitative molecular imaging at high spatial resolution.

  10. Use of multispectral images and chemometrics in tomato seed studies

    DEFF Research Database (Denmark)

    Shrestha, Santosh; Deleuran, Lise Christina; Gislum, René

    During the production of tomato seeds, green tomatoes are normally discarded before seed extraction irrespective of their maturity stage. Studies indicate that seeds from green tomatoes may reach be able to reach full germination capacity. Thus the potential of multispectral imaging for non......-destructive discrimination of seeds based on their germination capacity was investigated. A total of 840 seeds extracted from green and red tomatoes were divided into two sets; a training set and a test set consisting of 648 and 192 seeds respectively. Each set consisted of 96 seeds from green tomatoes. The multispectral...... images of the seeds were captured and normalized canonical discriminant analysis was used to analyse the images. Germination tests were performed and seeds that subsequently germinated were recorded as viable. The viable seeds were classified with 99% and 98% accuracy for the training and test set...

  11. Multispectral and polarimetric photodetection using a plasmonic metasurface

    Science.gov (United States)

    Pelzman, Charles; Cho, Sang-Yeon

    2018-01-01

    We present a metasurface-integrated Si 2-D CMOS sensor array for multispectral and polarimetric photodetection applications. The demonstrated sensor is based on the polarization selective extraordinary optical transmission from periodic subwavelength nanostructures, acting as artificial atoms, known as meta-atoms. The meta-atoms were created by patterning periodic rectangular apertures that support optical resonance at the designed spectral bands. By spatially separating meta-atom clusters with different lattice constants and orientations, the demonstrated metasurface can convert the polarization and spectral information of an optical input into a 2-D intensity pattern. As a proof-of-concept experiment, we measured the linear components of the Stokes parameters directly from captured images using a CMOS camera at four spectral bands. Compared to existing multispectral polarimetric sensors, the demonstrated metasurface-integrated CMOS system is compact and does not require any moving components, offering great potential for advanced photodetection applications.

  12. Automated segmentation of pigmented skin lesions in multispectral imaging

    International Nuclear Information System (INIS)

    Carrara, Mauro; Tomatis, Stefano; Bono, Aldo; Bartoli, Cesare; Moglia, Daniele; Lualdi, Manuela; Colombo, Ambrogio; Santinami, Mario; Marchesini, Renato

    2005-01-01

    The aim of this study was to develop an algorithm for the automatic segmentation of multispectral images of pigmented skin lesions. The study involved 1700 patients with 1856 cutaneous pigmented lesions, which were analysed in vivo by a novel spectrophotometric system, before excision. The system is able to acquire a set of 15 different multispectral images at equally spaced wavelengths between 483 and 951 nm. An original segmentation algorithm was developed and applied to the whole set of lesions and was able to automatically contour them all. The obtained lesion boundaries were shown to two expert clinicians, who, independently, rejected 54 of them. The 97.1% contour accuracy indicates that the developed algorithm could be a helpful and effective instrument for the automatic segmentation of skin pigmented lesions. (note)

  13. Multispectral Video-Microscope Modified for Skin Diagnostics

    Directory of Open Access Journals (Sweden)

    Rubins U.

    2014-12-01

    Full Text Available Commercial DinoLite AD413 digital microscope was modified for skin diagnostics purposes. The original LED ring (4 white and 4 ultraviolet light emitters of microscope was replaced by a custom-designed 16-LED ring module consisting of four LED groups (450, 545, 660 and 940 nm, and an onboard LED controller with USB hub was added. The video acquisition and LED switching are performed using custom-designed Matlab software which provides real-time spectral analysis of multi-spectral images and calculation of skin chromophore optical density. The developed multispectral video-microscope is mainly meant for diagnostics of skin malformations, e.g. skin cancerous lesions.

  14. Chemical Modification of Boron-Doped Diamond Electrodes for Applications to Biosensors and Biosensing.

    Science.gov (United States)

    Svítková, Jana; Ignat, Teodora; Švorc, Ľubomír; Labuda, Ján; Barek, Jiří

    2016-05-03

    Boron-doped diamond (BDD) is a prospective electrode material that possesses many exceptional properties including wide potential window, low noise, low and stable background current, chemical and mechanical stability, good biocompatibility, and last but not least exceptional resistance to passivation. These characteristics extend its usability in various areas of electrochemistry as evidenced by increasing number of published articles over the past two decades. The idea of chemically modifying BDD electrodes with molecular species attached to the surface for the purpose of creating a rational design has found promising applications in the past few years. BDD electrodes have appeared to be excellent substrate materials for various chemical modifications and subsequent application to biosensors and biosensing. Hence, this article presents modification strategies that have extended applications of BDD electrodes in electroanalytical chemistry. Different methods and steps of surface modification of this electrode material for biosensing and construction of biosensors are discussed.

  15. Functional Carbon Quantum Dots: A Versatile Platform for Chemosensing and Biosensing.

    Science.gov (United States)

    Feng, Hui; Qian, Zhaosheng

    2018-05-01

    Carbon quantum dot has emerged as a new promising fluorescent nanomaterial due to its excellent optical properties, outstanding biocompatibility and accessible fabrication methods, and has shown huge application perspective in a variety of areas, especially in chemosensing and biosensing applications. In this personal account, we give a brief overview of carbon quantum dots from its origin and preparation methods, present some advance on fluorescence origin of carbon quantum dots, and focus on development of chemosensors and biosensors based on functional carbon quantum dots. Comprehensive advances on functional carbon quantum dots as a versatile platform for sensing from our group are included and summarized as well as some typical examples from the other groups. The biosensing applications of functional carbon quantum dots are highlighted from selective assays of enzyme activity to fluorescent identification of cancer cells and bacteria. © 2018 The Chemical Society of Japan & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  16. OLED Hybrid Integrated Polymer Microfluidic Biosensing for Point of Care Testing

    Directory of Open Access Journals (Sweden)

    Ashwin Acharya

    2015-09-01

    Full Text Available This paper reports a microfluidic platform with external hybrid integration of an organic light emitting diode (OLED as an excitation source. This device can be used as a simple and cost effective biosensing element. The device is capable of rapid in-situ detection of biological elements such as sensing of interaction of antigen with fluorescent tagged antibody conjugates. These portable microfluidic systems have great potential for use an OLED in a single chip with very high accuracy and sensitivity for various point-of-care (POC diagnosis and lab on a chip (LOC applications, as the miniaturization of the biosensor is essential for handling smaller sample volumes in order to achieve high throughput. The biosensing element was successfully tested to detect anti-sheep IgG conjugates tagged to Alexafluor using a fluorescence based immunoassay method.

  17. Towards autonomous lab-on-a-chip devices for cell phone biosensing.

    Science.gov (United States)

    Comina, Germán; Suska, Anke; Filippini, Daniel

    2016-03-15

    Modern cell phones are a ubiquitous resource with a residual capacity to accommodate chemical sensing and biosensing capabilities. From the different approaches explored to capitalize on such resource, the use of autonomous disposable lab-on-a-chip (LOC) devices-conceived as only accessories to complement cell phones-underscores the possibility to entirely retain cell phones' ubiquity for distributed biosensing. The technology and principles exploited for autonomous LOC devices are here selected and reviewed focusing on their potential to serve cell phone readout configurations. Together with this requirement, the central aspects of cell phones' resources that determine their potential for analytical detection are examined. The conversion of these LOC concepts into universal architectures that are readable on unaccessorized phones is discussed within this context. Copyright © 2015 Elsevier B.V. All rights reserved.

  18. Combined Cell Culture-Biosensing Platform Using Vertically Aligned Patterned Peptide Nanofibers for Cellular Studies

    DEFF Research Database (Denmark)

    Taskin, Mehmet B.; Sasso, Luigi; Dimaki, Maria

    2013-01-01

    it possible to avoid a loss of sensitivity because of the diffusion of the sample. The obtained results showed that the peptide nanofibers were suitable as a cell culturing substrate for PC12 cells. The peptide nanofibers could be employed as an alternative biological material to increase the adherence......This Article presents the development of a combined cell culture–biosensing platform using vertically aligned self-assembled peptide nanofibers. Peptide nanofibers were patterned on a microchip containing gold microelectrodes to provide the cells with a 3D environment enabling them to grow...... and proliferate. Gold microelectrodes were functionalized with conductive polymers for the electrochemical detection of dopamine released from PC12 cells. The combined cell culture–biosensing platform assured a close proximity of the release site, the cells and the active surface of the sensor, thereby rendering...

  19. Electrochemical biosensing of galactose based on carbon materials: graphene versus multi-walled carbon nanotubes.

    Science.gov (United States)

    Dalkıran, Berna; Erden, Pınar Esra; Kılıç, Esma

    2016-06-01

    In this study, two enzyme electrodes based on graphene (GR), Co3O4 nanoparticles and chitosan (CS) or multi-walled carbon nanotubes (MWCNTs), Co3O4 nanoparticles, and CS, were fabricated as novel biosensing platforms for galactose determination, and their performances were compared. Galactose oxidase (GaOx) was immobilized onto the electrode surfaces by crosslinking with glutaraldehyde. Optimum working conditions of the biosensors were investigated and the analytical performance of the biosensors was compared with respect to detection limit, linearity, repeatability, and stability. The MWCNTs-based galactose biosensor provided about 1.6-fold higher sensitivity than its graphene counterpart. Moreover, the linear working range and detection limit of the MWCNTs-based galactose biosensor was superior to the graphene-modified biosensor. The successful application of the purposed biosensors for galactose biosensing in human serum samples was also investigated.

  20. Suitable combination of noble/ferromagnetic metal multilayers for enhanced magneto-plasmonic biosensing.

    Science.gov (United States)

    Regatos, David; Sepúlveda, Borja; Fariña, David; Carrascosa, Laura G; Lechuga, Laura M

    2011-04-25

    We present a theoretical and experimental study on the biosensing sensitivity of Au/Co/Au multilayers as transducers of the magneto-optic surface-plasmon-resonance (MOSPR) sensor. We demonstrate that the sensing response of these magneto-plasmonic (MP) transducers is a trade-off between the optical absorption and the magneto-optical activity, observing that the MP multilayer with larger MO effect does not provide the best sensing response. We show that it is possible to design highly-sensitive MP transducers able to largely surpass the limit of detection of the conventional surface-plasmon-resonance (SPR) sensor. This was proved comparing the biosensing performance of both sensors for the label-free detection of short DNA chains hybridization. For this purpose, we used and tested a novel label-free biofunctionalization protocol based on polyelectrolytes, which increases the resistance of MP transducers in aqueous environments.

  1. Understanding the role of thiol and disulfide self-assembled DNA receptor monolayers for biosensing applications.

    Science.gov (United States)

    Carrascosa, Laura G; Martínez, Lidia; Huttel, Yves; Román, Elisa; Lechuga, Laura M

    2010-09-01

    A detailed study of the immobilization of three differently sulfur-modified DNA receptors for biosensing applications is presented. The three receptors are DNA-(CH)n-SH-, DNA-(CH)n-SS-(CH)n-DNA, and DNA-(CH)n-SS-DMTO. Nanomechanical and surface plasmon resonance biosensors and fluorescence and radiolabelling techniques were used for the experimental evaluation. The results highlight the critical role of sulfur linker type in DNA self-assembly, affecting the kinetic adsorption and spatial distribution of DNA chains within the monolayer and the extent of chemisorption and physisorption. A spacer (mercaptohexanol, MCH) is used to evaluate the relative efficiencies of chemisorption of the three receptors by analysing the extent to which MCH can remove physisorbed molecules from each type of monolayer. It is demonstrated that -SH derivatization is the most suitable for biosensing purposes as it results in densely packed monolayers with the lowest ratio of physisorbed probes.

  2. Multispectral optical tweezers for molecular diagnostics of single biological cells

    Science.gov (United States)

    Butler, Corey; Fardad, Shima; Sincore, Alex; Vangheluwe, Marie; Baudelet, Matthieu; Richardson, Martin

    2012-03-01

    Optical trapping of single biological cells has become an established technique for controlling and studying fundamental behavior of single cells with their environment without having "many-body" interference. The development of such an instrument for optical diagnostics (including Raman and fluorescence for molecular diagnostics) via laser spectroscopy with either the "trapping" beam or secondary beams is still in progress. This paper shows the development of modular multi-spectral imaging optical tweezers combining Raman and Fluorescence diagnostics of biological cells.

  3. UTILIZING SAR AND MULTISPECTRAL INTEGRATED DATA FOR EMERGENCY RESPONSE

    Directory of Open Access Journals (Sweden)

    S. Havivi

    2016-06-01

    Full Text Available Satellite images are used widely in the risk cycle to understand the exposure, refine hazard maps and quickly provide an assessment after a natural or man-made disaster. Though there are different types of satellite images (e.g. optical, radar these have not been combined for risk assessments. The characteristics of different remote sensing data type may be extremely valuable for monitoring and evaluating the impacts of disaster events, to extract additional information thus making it available for emergency situations. To base this approach, two different change detection methods, for two different sensor's data were used: Coherence Change Detection (CCD for SAR data and Covariance Equalization (CE for multispectral imagery. The CCD provides an identification of the stability of an area, and shows where changes have occurred. CCD shows subtle changes with an accuracy of several millimetres to centimetres. The CE method overcomes the atmospheric effects differences between two multispectral images, taken at different times. Therefore, areas that had undergone a major change can be detected. To achieve our goals, we focused on the urban areas affected by the tsunami event in Sendai, Japan that occurred on March 11, 2011 which affected the surrounding area, coastline and inland. High resolution TerraSAR-X (TSX and Landsat 7 images, covering the research area, were acquired for the period before and after the event. All pre-processed and processed according to each sensor. Both results, of the optical and SAR algorithms, were combined by resampling the spatial resolution of the Multispectral data to the SAR resolution. This was applied by spatial linear interpolation. A score representing the damage level in both products was assigned. The results of both algorithms, high level of damage is shown in the areas closer to the sea and shoreline. Our approach, combining SAR and multispectral images, leads to more reliable information and provides a

  4. MULTISPECTRAL PANSHARPENING APPROACH USING PULSE-COUPLED NEURAL NETWORK SEGMENTATION

    Directory of Open Access Journals (Sweden)

    X. J. Li

    2018-04-01

    Full Text Available The paper proposes a novel pansharpening method based on the pulse-coupled neural network segmentation. In the new method, uniform injection gains of each region are estimated through PCNN segmentation rather than through a simple square window. Since PCNN segmentation agrees with the human visual system, the proposed method shows better spectral consistency. Our experiments, which have been carried out for both suburban and urban datasets, demonstrate that the proposed method outperforms other methods in multispectral pansharpening.

  5. Landscape functioning assessment using Landsat multispectral remote sensing data

    OpenAIRE

    Hesslerová, Petra

    2009-01-01

    The main aim of the dissertation thesis was to develop method, based on the use of multispectral satellite data and the theory of dissipation, allowing the analysis of landscape functioning. The theoretical basis is Prigogine's theory of dissipation and self-organization of structures in which energy dissipation is seen as the transformation of solar energy to other forms of energy. In this process the essential role play water availability and vegetation, which is able to bind solar radiatio...

  6. Multispectral imaging of the ocular fundus using light emitting diode illumination.

    Science.gov (United States)

    Everdell, N L; Styles, I B; Calcagni, A; Gibson, J; Hebden, J; Claridge, E

    2010-09-01

    We present an imaging system based on light emitting diode (LED) illumination that produces multispectral optical images of the human ocular fundus. It uses a conventional fundus camera equipped with a high power LED light source and a highly sensitive electron-multiplying charge coupled device camera. It is able to take pictures at a series of wavelengths in rapid succession at short exposure times, thereby eliminating the image shift introduced by natural eye movements (saccades). In contrast with snapshot systems the images retain full spatial resolution. The system is not suitable for applications where the full spectral resolution is required as it uses discrete wavebands for illumination. This is not a problem in retinal imaging where the use of selected wavelengths is common. The modular nature of the light source allows new wavelengths to be introduced easily and at low cost. The use of wavelength-specific LEDs as a source is preferable to white light illumination and subsequent filtering of the remitted light as it minimizes the total light exposure of the subject. The system is controlled via a graphical user interface that enables flexible control of intensity, duration, and sequencing of sources in synchrony with the camera. Our initial experiments indicate that the system can acquire multispectral image sequences of the human retina at exposure times of 0.05 s in the range of 500-620 nm with mean signal to noise ratio of 17 dB (min 11, std 4.5), making it suitable for quantitative analysis with application to the diagnosis and screening of eye diseases such as diabetic retinopathy and age-related macular degeneration.

  7. Multispectral image analysis for object recognition and classification

    Science.gov (United States)

    Viau, C. R.; Payeur, P.; Cretu, A.-M.

    2016-05-01

    Computer and machine vision applications are used in numerous fields to analyze static and dynamic imagery in order to assist or automate decision-making processes. Advancements in sensor technologies now make it possible to capture and visualize imagery at various wavelengths (or bands) of the electromagnetic spectrum. Multispectral imaging has countless applications in various fields including (but not limited to) security, defense, space, medical, manufacturing and archeology. The development of advanced algorithms to process and extract salient information from the imagery is a critical component of the overall system performance. The fundamental objective of this research project was to investigate the benefits of combining imagery from the visual and thermal bands of the electromagnetic spectrum to improve the recognition rates and accuracy of commonly found objects in an office setting. A multispectral dataset (visual and thermal) was captured and features from the visual and thermal images were extracted and used to train support vector machine (SVM) classifiers. The SVM's class prediction ability was evaluated separately on the visual, thermal and multispectral testing datasets.

  8. Quality assessment of butter cookies applying multispectral imaging

    Science.gov (United States)

    Andresen, Mette S; Dissing, Bjørn S; Løje, Hanne

    2013-01-01

    A method for characterization of butter cookie quality by assessing the surface browning and water content using multispectral images is presented. Based on evaluations of the browning of butter cookies, cookies were manually divided into groups. From this categorization, reference values were calculated for a statistical prediction model correlating multispectral images with a browning score. The browning score is calculated as a function of oven temperature and baking time. It is presented as a quadratic response surface. The investigated process window was the intervals 4–16 min and 160–200°C in a forced convection electrically heated oven. In addition to the browning score, a model for predicting the average water content based on the same images is presented. This shows how multispectral images of butter cookies may be used for the assessment of different quality parameters. Statistical analysis showed that the most significant wavelengths for browning predictions were in the interval 400–700 nm and the wavelengths significant for water prediction were primarily located in the near-infrared spectrum. The water prediction model was found to correctly estimate the average water content with an absolute error of 0.22%. From the images it was also possible to follow the browning and drying propagation from the cookie edge toward the center. PMID:24804036

  9. Use of Multispectral Imaging in Varietal Identification of Tomato

    DEFF Research Database (Denmark)

    Shrestha, Santosh; Deleuran, Lise Christina; Olesen, Merete Halkjær

    2015-01-01

    Abstract: Multispectral imaging is an emerging non-destructive technology. In this work its potential for varietal discrimination and identification of tomato cultivars of Nepal was investigated. Two sample sets were used for the study, one with two parents and their crosses and other with eleven...... obtained provide an opportunity of using multispectral imaging technology as a primary tool in a scientific community for identification/discrimination of plant varieties in regard to genetic purity and plant variety protection/registration.......Abstract: Multispectral imaging is an emerging non-destructive technology. In this work its potential for varietal discrimination and identification of tomato cultivars of Nepal was investigated. Two sample sets were used for the study, one with two parents and their crosses and other with eleven...... cultivars to study parents and offspring relationship and varietal identification respectively. Normalized canonical discriminant analysis (nCDA) and principal component analysis (PCA) were used to analyze and compare the results for parents and offspring study. Both the results showed clear discrimination...

  10. Multispectral fingerprinting for improved in vivo cell dynamics analysis

    Directory of Open Access Journals (Sweden)

    Cooper Cameron HJ

    2010-09-01

    Full Text Available Abstract Background Tracing cell dynamics in the embryo becomes tremendously difficult when cell trajectories cross in space and time and tissue density obscure individual cell borders. Here, we used the chick neural crest (NC as a model to test multicolor cell labeling and multispectral confocal imaging strategies to overcome these roadblocks. Results We found that multicolor nuclear cell labeling and multispectral imaging led to improved resolution of in vivo NC cell identification by providing a unique spectral identity for each cell. NC cell spectral identity allowed for more accurate cell tracking and was consistent during short term time-lapse imaging sessions. Computer model simulations predicted significantly better object counting for increasing cell densities in 3-color compared to 1-color nuclear cell labeling. To better resolve cell contacts, we show that a combination of 2-color membrane and 1-color nuclear cell labeling dramatically improved the semi-automated analysis of NC cell interactions, yet preserved the ability to track cell movements. We also found channel versus lambda scanning of multicolor labeled embryos significantly reduced the time and effort of image acquisition and analysis of large 3D volume data sets. Conclusions Our results reveal that multicolor cell labeling and multispectral imaging provide a cellular fingerprint that may uniquely determine a cell's position within the embryo. Together, these methods offer a spectral toolbox to resolve in vivo cell dynamics in unprecedented detail.

  11. Dual multispectral and 3D structured light laparoscope

    Science.gov (United States)

    Clancy, Neil T.; Lin, Jianyu; Arya, Shobhit; Hanna, George B.; Elson, Daniel S.

    2015-03-01

    Intraoperative feedback on tissue function, such as blood volume and oxygenation would be useful to the surgeon in cases where current clinical practice relies on subjective measures, such as identification of ischaemic bowel or tissue viability during anastomosis formation. Also, tissue surface profiling may be used to detect and identify certain pathologies, as well as diagnosing aspects of tissue health such as gut motility. In this paper a dual modality laparoscopic system is presented that combines multispectral reflectance and 3D surface imaging. White light illumination from a xenon source is detected by a laparoscope-mounted fast filter wheel camera to assemble a multispectral image (MSI) cube. Surface shape is then calculated using a spectrally-encoded structured light (SL) pattern detected by the same camera and triangulated using an active stereo technique. Images of porcine small bowel were acquired during open surgery. Tissue reflectance spectra were acquired and blood volume was calculated at each spatial pixel across the bowel wall and mesentery. SL features were segmented and identified using a `normalised cut' algoritm and the colour vector of each spot. Using the 3D geometry defined by the camera coordinate system the multispectral data could be overlaid onto the surface mesh. Dual MSI and SL imaging has the potential to provide augmented views to the surgeon supplying diagnostic information related to blood supply health and organ function. Future work on this system will include filter optimisation to reduce noise in tissue optical property measurement, and minimise spot identification errors in the SL pattern.

  12. COMPARISON OF RETINAL PATHOLOGY VISUALIZATION IN MULTISPECTRAL SCANNING LASER IMAGING.

    Science.gov (United States)

    Meshi, Amit; Lin, Tiezhu; Dans, Kunny; Chen, Kevin C; Amador, Manuel; Hasenstab, Kyle; Muftuoglu, Ilkay Kilic; Nudleman, Eric; Chao, Daniel; Bartsch, Dirk-Uwe; Freeman, William R

    2018-03-16

    To compare retinal pathology visualization in multispectral scanning laser ophthalmoscope imaging between the Spectralis and Optos devices. This retrospective cross-sectional study included 42 eyes from 30 patients with age-related macular degeneration (19 eyes), diabetic retinopathy (10 eyes), and epiretinal membrane (13 eyes). All patients underwent retinal imaging with a color fundus camera (broad-spectrum white light), the Spectralis HRA-2 system (3-color monochromatic lasers), and the Optos P200 system (2-color monochromatic lasers). The Optos image was cropped to a similar size as the Spectralis image. Seven masked graders marked retinal pathologies in each image within a 5 × 5 grid that included the macula. The average area with detected retinal pathology in all eyes was larger in the Spectralis images compared with Optos images (32.4% larger, P < 0.0001), mainly because of better visualization of epiretinal membrane and retinal hemorrhage. The average detection rate of age-related macular degeneration and diabetic retinopathy pathologies was similar across the three modalities, whereas epiretinal membrane detection rate was significantly higher in the Spectralis images. Spectralis tricolor multispectral scanning laser ophthalmoscope imaging had higher rate of pathology detection primarily because of better epiretinal membrane and retinal hemorrhage visualization compared with Optos bicolor multispectral scanning laser ophthalmoscope imaging.

  13. An Optical Biosensing Strategy Based on Selective Light Absorption and Wavelength Filtering from Chromogenic Reaction

    Directory of Open Access Journals (Sweden)

    Hyeong Jin Chun

    2018-03-01

    Full Text Available To overcome the time and space constraints in disease diagnosis via the biosensing approach, we developed a new signal-transducing strategy that can be applied to colorimetric optical biosensors. Our study is focused on implementation of a signal transduction technology that can directly translate the color intensity signals—that require complicated optical equipment for the analysis—into signals that can be easily counted with the naked eye. Based on the selective light absorption and wavelength-filtering principles, our new optical signaling transducer was built from a common computer monitor and a smartphone. In this signal transducer, the liquid crystal display (LCD panel of the computer monitor served as a light source and a signal guide generator. In addition, the smartphone was used as an optical receiver and signal display. As a biorecognition layer, a transparent and soft material-based biosensing channel was employed generating blue output via a target-specific bienzymatic chromogenic reaction. Using graphics editor software, we displayed the optical signal guide patterns containing multiple polygons (a triangle, circle, pentagon, heptagon, and 3/4 circle, each associated with a specified color ratio on the LCD monitor panel. During observation of signal guide patterns displayed on the LCD monitor panel using a smartphone camera via the target analyte-loaded biosensing channel as a color-filtering layer, the number of observed polygons changed according to the concentration of the target analyte via the spectral correlation between absorbance changes in a solution of the biosensing channel and color emission properties of each type of polygon. By simple counting of the changes in the number of polygons registered by the smartphone camera, we could efficiently measure the concentration of a target analyte in a sample without complicated and expensive optical instruments. In a demonstration test on glucose as a model analyte, we

  14. An Optical Biosensing Strategy Based on Selective Light Absorption and Wavelength Filtering from Chromogenic Reaction.

    Science.gov (United States)

    Chun, Hyeong Jin; Han, Yong Duk; Park, Yoo Min; Kim, Ka Ram; Lee, Seok Jae; Yoon, Hyun C

    2018-03-06

    To overcome the time and space constraints in disease diagnosis via the biosensing approach, we developed a new signal-transducing strategy that can be applied to colorimetric optical biosensors. Our study is focused on implementation of a signal transduction technology that can directly translate the color intensity signals-that require complicated optical equipment for the analysis-into signals that can be easily counted with the naked eye. Based on the selective light absorption and wavelength-filtering principles, our new optical signaling transducer was built from a common computer monitor and a smartphone. In this signal transducer, the liquid crystal display (LCD) panel of the computer monitor served as a light source and a signal guide generator. In addition, the smartphone was used as an optical receiver and signal display. As a biorecognition layer, a transparent and soft material-based biosensing channel was employed generating blue output via a target-specific bienzymatic chromogenic reaction. Using graphics editor software, we displayed the optical signal guide patterns containing multiple polygons (a triangle, circle, pentagon, heptagon, and 3/4 circle, each associated with a specified color ratio) on the LCD monitor panel. During observation of signal guide patterns displayed on the LCD monitor panel using a smartphone camera via the target analyte-loaded biosensing channel as a color-filtering layer, the number of observed polygons changed according to the concentration of the target analyte via the spectral correlation between absorbance changes in a solution of the biosensing channel and color emission properties of each type of polygon. By simple counting of the changes in the number of polygons registered by the smartphone camera, we could efficiently measure the concentration of a target analyte in a sample without complicated and expensive optical instruments. In a demonstration test on glucose as a model analyte, we could easily measure the

  15. Recent advances in lab-on-a-chip for biosensing applications

    DEFF Research Database (Denmark)

    Lafleur, Josiane P.; Jönsson, Alexander; Senkbeil, Silja

    2016-01-01

    The marriage of highly sensitive biosensor designs with the versatility in sample handling and fluidic manipulation offered by lab-on-a-chip systems promises to yield powerful tools for analytical and, in particular, diagnostic applications. The field where these two technologies meet is rapidly...... improvements to existing methods. Recent examples, showing a staggering variety of lab-on-a-chip systems for biosensing applications, are presented, tabularized for overview, and briefly discussed....

  16. Electroactive and biocompatible functionalization of graphene for the development of biosensing platforms

    DEFF Research Database (Denmark)

    Halder, Arnab; Zhang, Minwei; Chi, Qijin

    2017-01-01

    the polymer matrix. The as-prepared functional composite is electrochemically active and enables to accommodate enzymes stably. For proof-of-concept studies, two crucial redox enzymes for biosensors (i.e. cholesterol oxidase and glucose oxidase) are targeted. The enzyme integrated and RGO supported biosensing...... hybrid systems show high stability, excellent selectivity, good reproducibility and fast sensing response. As measured, the detection limit of the biosensors for glucose and cholesterol is 5 µM and 0.5 µM (S/N=3), respectively. The linear response range of the biosensor is from 0.1 to 15.5 mM for glucose...... and from 2.5 to 25 µM for cholesterol. Furthermore, this biosensing platform shows good anti-interference ability and reasonable stability. The nanohybrid biosensing materials can be combined with screen-printed electrodes, which are successfully used for measuring the glucose and cholesterol level of real...

  17. Ambient light-based optical biosensing platform with smartphone-embedded illumination sensor.

    Science.gov (United States)

    Park, Yoo Min; Han, Yong Duk; Chun, Hyeong Jin; Yoon, Hyun C

    2017-07-15

    We present a hand-held optical biosensing system utilizing a smartphone-embedded illumination sensor that is integrated with immunoblotting assay method. The smartphone-embedded illumination sensor is regarded as an alternative optical receiver that can replaces the conventional optical analysis apparatus because the illumination sensor can respond to the ambient light in a wide range of wavelengths, including visible and infrared. To demonstrate the biosensing applicability of our system employing the enzyme-mediated immunoblotting and accompanying light interference, various types of ambient light conditions including outdoor sunlight and indoor fluorescent were tested. For the immunoblotting assay, the biosensing channel generating insoluble precipitates as an end product of the enzymatic reaction is fabricated and mounted on the illumination sensor of the smartphone. The intensity of penetrating light arrives on the illumination sensor is inversely proportional to the amount of precipitates produced in the channel, and these changes are immediately analyzed and quantified via smartphone software. In this study, urinary C-terminal telopeptide fragment of type II collagen (uCTX-II), a biomarker of osteoarthritis diagnosis, was tested as a model analyte. The developed smartphone-based sensing system efficiently measured uCTX-II in the 0-5ng/mL concentration range with a high sensitivity and accuracy under various light conditions. These assay results show that the illumination sensor-based optical biosensor is suitable for point-of-care testing (POCT). Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Zinc oxide-potassium ferricyanide composite thin film matrix for biosensing applications

    Energy Technology Data Exchange (ETDEWEB)

    Saha, Shibu [Department of Physics and Astrophysics, University of Delhi, Delhi 110007 (India); Arya, Sunil K. [Department of Science and Technology Centre on Biomolecular Electronics, National Physical Laboratory, New Delhi 110012 (India); Singh, S.P. [Department of Engineering Science and Materials, University of Puerto Rico, Mayaguez, PR 00680 (United States); Sreenivas, K. [Department of Physics and Astrophysics, University of Delhi, Delhi 110007 (India); Malhotra, B.D. [Department of Science and Technology Centre on Biomolecular Electronics, National Physical Laboratory, New Delhi 110012 (India); Gupta, Vinay, E-mail: vgupta@physics.du.ac.in [Department of Physics and Astrophysics, University of Delhi, Delhi 110007 (India)

    2009-10-27

    Thin film of zinc oxide-potassium ferricyanide (ZnO-KFCN) composite has been deposited on indium tin oxide (ITO) coated corning glass using pulsed laser deposition (PLD). The composite thin film electrode has been exploited for amperometric biosensing in a mediator-free electrolyte. The composite matrix has the advantages of high iso-electric point of ZnO along with enhanced electron communication due to the presence of a redox species in the matrix itself. Glucose oxidase (GOx) has been chosen as the model enzyme for studying the application of the developed matrix to biosensing. The sensing response of the bio-electrode, GOx/ZnO-KFCN/ITO/glass, towards glucose was studied using cylic voltammetry (CV) and photometric assay. The bio-electrode exhibits good linearity from 2.78 mM to 11.11 mM glucose concentration. The low value of Michaelis-Menten constant (1.69 mM) indicates an enhanced affinity of the immobilized enzyme towards its substrate. A quassireversible system is obtained with the composite matrix. The results confirm promising application of the ZnO-KFCN composite matrix for amperometric biosensing applications in a mediator-less electrolyte that could lead to the realization of an integrated lab-on-chip device.

  19. Zinc oxide-potassium ferricyanide composite thin film matrix for biosensing applications

    International Nuclear Information System (INIS)

    Saha, Shibu; Arya, Sunil K.; Singh, S.P.; Sreenivas, K.; Malhotra, B.D.; Gupta, Vinay

    2009-01-01

    Thin film of zinc oxide-potassium ferricyanide (ZnO-KFCN) composite has been deposited on indium tin oxide (ITO) coated corning glass using pulsed laser deposition (PLD). The composite thin film electrode has been exploited for amperometric biosensing in a mediator-free electrolyte. The composite matrix has the advantages of high iso-electric point of ZnO along with enhanced electron communication due to the presence of a redox species in the matrix itself. Glucose oxidase (GOx) has been chosen as the model enzyme for studying the application of the developed matrix to biosensing. The sensing response of the bio-electrode, GOx/ZnO-KFCN/ITO/glass, towards glucose was studied using cylic voltammetry (CV) and photometric assay. The bio-electrode exhibits good linearity from 2.78 mM to 11.11 mM glucose concentration. The low value of Michaelis-Menten constant (1.69 mM) indicates an enhanced affinity of the immobilized enzyme towards its substrate. A quassireversible system is obtained with the composite matrix. The results confirm promising application of the ZnO-KFCN composite matrix for amperometric biosensing applications in a mediator-less electrolyte that could lead to the realization of an integrated lab-on-chip device.

  20. A Novel ZnO-Methylene Blue Nanocomposite Matrix for Biosensing Application

    Directory of Open Access Journals (Sweden)

    Shibu Saha

    2011-01-01

    Full Text Available A novel hybrid matrix of zinc oxide-methylene blue (ZnO-MB has been successfully developed for biosensing application. The introduction of methylene blue into the ZnO thin film leads to reduction in the charge transfer resistance and suggests an increase in the electron transfer capacity of the composite. Glucose oxidase (GOx was chosen as the model enzyme and effectively immobilized on the surface of hybrid ZnO-MB nanocomposite matrix. Electrochemical measurements were employed to study biosensing response of the GOx/ZnO-MB/ITO bioelectrode as a function of glucose concentration. The low oxidation potential (−0.23 V of the hybrid bioelectrode, in a mediatorless electrolyte, makes it resistant against interference from other bio-molecules. The low value of Michaelis-Menten constant (2.65 mM indicates that immobilized GOx retains its enzymatic activity significantly on the surface of nanocomposite hybrid matrix that results in an enhanced affinity towards its substrate (glucose. The ZnO-MB nanocomposite hybrid matrix, exhibiting enhanced sensing response (0.2 μAmM−1cm−2 with long shelf-life (>10 weeks, has potential for the realization of an integrated biosensing device.

  1. A multilevel multispectral data set analysis in the visible and infrared wavelength regions. [for land use remote sensing

    Science.gov (United States)

    Biehl, L. L.; Silva, L. F.

    1975-01-01

    Skylab multispectral scanner data, digitized Skylab color infrared (IR) photography, digitized Skylab black and white multiband photography, and Earth Resources Technology Satellite (ERTS) multispectral scanner data collected within a 24-hr time period over an area in south-central Indiana near Bloomington on June 9 and 10, 1973, were compared in a machine-aided land use analysis of the area. The overall classification performance results, obtained with nine land use classes, were 87% correct classification using the 'best' 4 channels of the Skylab multispectral scanner, 80% for the channels on the Skylab multispectral scanner which are spectrally comparable to the ERTS multispectral scanner, 88% for the ERTS multispectral scanner, 83% for the digitized color IR photography, and 76% for the digitized black and white multiband photography. The results indicate that the Skylab multispectral scanner may yield even higher classification accuracies when a noise-filtered multispectral scanner data set becomes available in the near future.

  2. Robust volume assessment of brain tissues for 3-dimensional fourier transformation MRI via a novel multispectral technique.

    Directory of Open Access Journals (Sweden)

    Jyh-Wen Chai

    Full Text Available A new TRIO algorithm method integrating three different algorithms is proposed to perform brain MRI segmentation in the native coordinate space, with no need of transformation to a standard coordinate space or the probability maps for segmentation. The method is a simple voxel-based algorithm, derived from multispectral remote sensing techniques, and only requires minimal operator input to depict GM, WM, and CSF tissue clusters to complete classification of a 3D high-resolution multislice-multispectral MRI data. Results showed very high accuracy and reproducibility in classification of GM, WM, and CSF in multislice-multispectral synthetic MRI data. The similarity indexes, expressing overlap between classification results and the ground truth, were 0.951, 0.962, and 0.956 for GM, WM, and CSF classifications in the image data with 3% noise level and 0% non-uniformity intensity. The method particularly allows for classification of CSF with 0.994, 0.961 and 0.996 of accuracy, sensitivity and specificity in images data with 3% noise level and 0% non-uniformity intensity, which had seldom performed well in previous studies. As for clinical MRI data, the quantitative data of brain tissue volumes aligned closely with the brain morphometrics in three different study groups of young adults, elderly volunteers, and dementia patients. The results also showed very low rates of the intra- and extra-operator variability in measurements of the absolute volumes and volume fractions of cerebral GM, WM, and CSF in three different study groups. The mean coefficients of variation of GM, WM, and CSF volume measurements were in the range of 0.03% to 0.30% of intra-operator measurements and 0.06% to 0.45% of inter-operator measurements. In conclusion, the TRIO algorithm exhibits a remarkable ability in robust classification of multislice-multispectral brain MR images, which would be potentially applicable for clinical brain volumetric analysis and explicitly promising

  3. Radiometric Cross-Calibration of GF-4 in Multispectral Bands

    Directory of Open Access Journals (Sweden)

    Aixia Yang

    2017-03-01

    Full Text Available The GaoFen-4 (GF-4, launched at the end of December 2015, is China’s first high-resolution geostationary optical satellite. A panchromatic and multispectral sensor (PMS is onboard the GF-4 satellite. Unfortunately, the GF-4 has no onboard calibration assembly, so on-orbit radiometric calibration is required. Like the charge-coupled device (CCD onboard HuanJing-1 (HJ or the wide field of view sensor (WFV onboard GaoFen-1 (GF-1, GF-4 also has a wide field of view, which provides challenges for cross-calibration with narrow field of view sensors, like the Landsat series. A new technique has been developed and used to calibrate HJ-1/CCD and GF-1/WFV, which is verified viable. The technique has three key steps: (1 calculate the surface using the bi-directional reflectance distribution function (BRDF characterization of a site, taking advantage of its uniform surface material and natural topographic variation using Landsat Enhanced Thematic Mapper Plus (ETM+/Operational Land Imager (OLI imagery and digital elevation model (DEM products; (2 calculate the radiance at the top-of-the atmosphere (TOA with the simulated surface reflectance using the atmosphere radiant transfer model; and (3 fit the calibration coefficients with the TOA radiance and corresponding Digital Number (DN values of the image. This study attempts to demonstrate the technique is also feasible to calibrate GF-4 multispectral bands. After fitting the calibration coefficients using the technique, extensive validation is conducted by cross-validation using the image pairs of GF-4/PMS and Landsat-8/OLI with similar transit times and close view zenith. The validation result indicates a higher accuracy and frequency than that given by the China Centre for Resources Satellite Data and Application (CRESDA using vicarious calibration. The study shows that the new technique is also quite feasible for GF-4 multispectral bands as a routine long-term procedure.

  4. Statistical Quality Assessment of Pre-fried Carrots Using Multispectral Imaging

    DEFF Research Database (Denmark)

    Sharifzadeh, Sara; Clemmensen, Line Katrine Harder; Løje, Hanne

    2013-01-01

    Multispectral imaging is increasingly being used for quality assessment of food items due to its non-invasive benefits. In this paper, we investigate the use of multispectral images of pre-fried carrots, to detect changes over a period of 14 days. The idea is to distinguish changes in quality from...

  5. Location deterministic biosensing from quantum-dot-nanowire assemblies

    International Nuclear Information System (INIS)

    Liu, Chao; Kim, Kwanoh; Fan, D. L.

    2014-01-01

    Semiconductor quantum dots (QDs) with high fluorescent brightness, stability, and tunable sizes, have received considerable interest for imaging, sensing, and delivery of biomolecules. In this research, we demonstrate location deterministic biochemical detection from arrays of QD-nanowire hybrid assemblies. QDs with diameters less than 10 nm are manipulated and precisely positioned on the tips of the assembled Gold (Au) nanowires. The manipulation mechanisms are quantitatively understood as the synergetic effects of dielectrophoretic (DEP) and alternating current electroosmosis (ACEO) due to AC electric fields. The QD-nanowire hybrid sensors operate uniquely by concentrating bioanalytes to QDs on the tips of nanowires before detection, offering much enhanced efficiency and sensitivity, in addition to the position-predictable rationality. This research could result in advances in QD-based biomedical detection and inspires an innovative approach for fabricating various QD-based nanodevices.

  6. Colorimetric detection for paper-based biosensing applications

    Science.gov (United States)

    Brink, C.; Joubert, T.-H.

    2016-02-01

    Research on affordable point-of-care health diagnostics is rapidly advancing1. Colorimetric biosensor applications are typically qualitative, but recently the focus has been shifted to quantitative measurements2,3. Although numerous qualitative point-of-care (POC) health diagnostic devices are available, the challenge exists of developing a quantitative colorimetric array reader system that complies with the ASSURED (Affordable, Sensitive, Specific, User-friendly, Rapid and Robust, Equipment-free, Deliverable to end-users) principles of the World Health Organization4. This paper presents a battery powered 8-bit tonal resolution colorimetric sensor circuit for paper microfluidic assays using low cost photo-detection circuitry and a low-power LED light source. A colorimetric 3×3-pixel array reader was developed for rural environments where resources and personnel are limited. The device sports an ultralow-power E-ink paper display. The colorimetric device includes integrated GPS functionality and EEPROM memory to log measurements with geo-tags for possible analysis of regional trends. The device competes with colour intensity measurement techniques using smartphone cameras, but proves to be a cheaper solution, compensating for the typical performance variations between cameras of different brands of smartphones. Inexpensive methods for quantifying bacterial assays have been shown using desktop scanners, which are not portable, and cameras, which suffer severely from changes in ambient light in different environments. Promising colorimetric detection results have been demonstrated using devices such as video cameras5, digital colour analysers6, flatbed scanners7 or custom portable readers8. The major drawback of most of these methods is the need for specialized instrumentation and for image analysis on a computer.

  7. Multispectral mid-infrared imaging using frequency upconversion

    DEFF Research Database (Denmark)

    Sanders, Nicolai Højer; Dam, Jeppe Seidelin; Jensen, Ole Bjarlin

    2013-01-01

    It has recently been shown that it is possible to upconvert infrared images to the near infrared region with high quantum efficiency and low noise by three-wave mixing with a laser field [1]. If the mixing laser is single-frequency, the upconverted image is simply a band-pass filtered version...... parameter, allowing for fast tuning and hence potentially fast image acquisition, paving the way for upconversion based real time multispectral imaging. In the present realization the upconversion module consists of an external cavity tapered diode laser in a Littrow configuration with a computer controlled...

  8. Multi-spectral optical scanners for commercial earth observation missions

    Science.gov (United States)

    Schröter, Karin; Engel, Wolfgang; Berndt, Klaus

    2017-11-01

    In recent years, a number of commercial Earth observation missions have been initiated with the aim to gather data in the visible and near-infrared wavelength range. Some of these missions aim at medium resolution (5 to 10 m) multi-spectral imaging with the special background of daily revisiting. Typical applications aim at monitoring of farming area for growth control and harvest prediction, irrigation control, or disaster monitoring such as hail damage in farming, or flood survey. In order to arrive at profitable business plans for such missions, it is mandatory to establish the space segment, i.e. the spacecraft with their opto -electronic payloads, at minimum cost while guaranteeing maximum reliability for mission success. As multiple spacecraft are required for daily revisiting, the solutions are typically based on micro-satellites. This paper presents designs for multi-spectral opto-electric scanners for this type of missions. These designs are drive n by minimum mass and power budgets of microsatellites, and the need for minimum cost. As a consequence, it is mandatory to arrive at thermally robust, compact telescope designs. The paper gives a comparison between refractive, catadioptric, and TMA optics. For mirror designs, aluminium and Zerodur mirror technologies are briefly discussed. State-of-the art focal plane designs are presented. The paper also addresses the choice of detector technologies such as CCDs and CMOS Active Pixel Sensors. The electronics of the multi-spectral scanners represent the main design driver regarding power consumption, reliability, and (most often) cost. It can be subdivided into the detector drive electronics, analog and digital data processing chains, the data mass memory unit, formatting and down - linking units, payload control electronics, and local power supply. The paper gives overviews and trade-offs between data compression strategies and electronics solutions, mass memory unit designs, and data formatting approaches

  9. Snapshot spectral and polarimetric imaging; target identification with multispectral video

    Science.gov (United States)

    Bartlett, Brent D.; Rodriguez, Mikel D.

    2013-05-01

    As the number of pixels continue to grow in consumer and scientific imaging devices, it has become feasible to collect the incident light field. In this paper, an imaging device developed around light field imaging is used to collect multispectral and polarimetric imagery in a snapshot fashion. The sensor is described and a video data set is shown highlighting the advantage of snapshot spectral imaging. Several novel computer vision approaches are applied to the video cubes to perform scene characterization and target identification. It is shown how the addition of spectral and polarimetric data to the video stream allows for multi-target identification and tracking not possible with traditional RGB video collection.

  10. Multispectral Image Analysis for Robust Prediction of Astaxanthin Coating

    DEFF Research Database (Denmark)

    Ljungqvist, Martin Georg; Frosch, Stina; Nielsen, Michael Engelbrecht

    2013-01-01

    The aim of this study was to investigate the possibility of predicting the type and concentration level of astaxanthin coating of aquaculture feed pellets using multispectral image analysis. We used both natural and synthetic astaxanthin, and we used several different concentration levels...... of synthetic astaxanthin in combination with four different recipes of feed pellets. We used a VideometerLab with 20 spectral bands in the range of 385-1050 nm. We used linear discriminant analysis and sparse linear discriminant analysis for classification and variable selection. We used partial least squares...

  11. SPEKTROP DPU: optoelectronic platform for fast multispectral imaging

    Science.gov (United States)

    Graczyk, Rafal; Sitek, Piotr; Stolarski, Marcin

    2010-09-01

    In recent years it easy to spot and increasing need of high-quality Earth imaging in airborne and space applications. This is due fact that government and local authorities urge for up to date topological data for administrative purposes. On the other hand, interest in environmental sciences, push for ecological approach, efficient agriculture and forests management are also heavily supported by Earth images in various resolutions and spectral ranges. "SPEKTROP DPU: Opto-electronic platform for fast multi-spectral imaging" paper describes architectural datails of data processing unit, part of universal and modular platform that provides high quality imaging functionality in aerospace applications.

  12. Multispectral atmospheric mapping sensor of mesoscale water vapor features

    Science.gov (United States)

    Menzel, P.; Jedlovec, G.; Wilson, G.; Atkinson, R.; Smith, W.

    1985-01-01

    The Multispectral atmospheric mapping sensor was checked out for specified spectral response and detector noise performance in the eight visible and three infrared (6.7, 11.2, 12.7 micron) spectral bands. A calibration algorithm was implemented for the infrared detectors. Engineering checkout flights on board the ER-2 produced imagery at 50 m resolution in which water vapor features in the 6.7 micron spectral band are most striking. These images were analyzed on the Man computer Interactive Data Access System (McIDAS). Ground truth and ancillary data was accessed to verify the calibration.

  13. Oxidative polymerization of 5-hydroxytryptamine to physically and chemically immobilize glucose oxidase for electrochemical biosensing.

    Science.gov (United States)

    Huang, Ting; Liu, Zaichun; Li, Yunlong; Li, Yanqiu; Chao, Long; Chen, Chao; Tan, Yueming; Xie, Qingji; Yao, Shouzhuo; Wu, Yuping

    2018-07-12

    Poly(5-hydroxytryptamine) (poly(5-HT)) is exploited as a new and efficient enzyme-immobilization matrix for amperometric and biofuel cell (BFC)-based biosensing. A GOx-poly(5-HT)-Pd nanoparticles (PdNPs) bionanocomposite is prepared by Na 2 PdCl 4 -initiated oxidized polymerization of 5-hydroxytryptamine (5-HT) in a neutral aqueous solution containing glucose oxidase (GOx), and this bionanocomposite and then chitosan (CS) are cast-coated on a Pd-plated Au electrode to yield a CS/GOx-poly(5-HT)-PdNPs/Pd plate /Au enzyme electrode. Scanning/transmission electron microscopy, UV-vis spectrophotometry and electrochemical quartz crystal microbalance are employed for material characterization and/or process monitoring. Under optimized conditions, the amperometric response of the enzyme electrode is linear with glucose concentration from 2.0 μM to 6.66 mM with a sensitivity of 110 μA mM -1  cm -2 , a limit of detection of 0.2 μM, and excellent operation/storage stability in the first-generation biosensing mode. The sensitivity is larger than those of some conventional electrodes under identical conditions. The enzyme electrode also works well in the second-generation biosensing mode. By using the enzyme electrode as the anode for glucose oxidation and a Pd plate /Au electrode as the cathode for KMnO 4 reduction, a monopolar BFC is constructed as a self-powered biosensor, the current response of which is linear with glucose concentration from 50 μM to 34.5 mM. Experiments also show that poly(5-HT) is a physical and chemical dual-immobilization matrix of enzyme, since the abundant amino groups in poly(5-HT) can be used for chemical bonding of GOx. Copyright © 2018 Elsevier B.V. All rights reserved.

  14. Structural studies of the mechanism for biosensing antibiotics in a fluorescein-labeled β-lactamase

    Directory of Open Access Journals (Sweden)

    Wong Kwok-Yin

    2011-03-01

    Full Text Available Abstract Background β-lactamase conjugated with environment-sensitive fluorescein molecule to residue 166 on the Ω-loop near its catalytic site is a highly effective biosensor for β-lactam antibiotics. Yet the molecular mechanism of such fluorescence-based biosensing is not well understood. Results Here we report the crystal structure of a Class A β-lactamase PenP from Bacillus licheniformis 749/C with fluorescein conjugated at residue 166 after E166C mutation, both in apo form (PenP-E166Cf and in covalent complex form with cefotaxime (PenP-E166Cf-cefotaxime, to illustrate its biosensing mechanism. In the apo structure the fluorescein molecule partially occupies the antibiotic binding site and is highly dynamic. In the PenP-E166Cf-cefatoxime complex structure the binding and subsequent acylation of cefotaxime to PenP displaces fluorescein from its original location to avoid steric clash. Such displacement causes the well-folded Ω-loop to become fully flexible and the conjugated fluorescein molecule to relocate to a more solvent exposed environment, hence enhancing its fluorescence emission. Furthermore, the fully flexible Ω-loop enables the narrow-spectrum PenP enzyme to bind cefotaxime in a mode that resembles the extended-spectrum β-lactamase. Conclusions Our structural studies indicate the biosensing mechanism of a fluorescein-labelled β-lactamase. Such findings confirm our previous proposal based on molecular modelling and provide useful information for the rational design of β-lactamase-based biosensor to detect the wide spectrum of β-lactam antibiotics. The observation of increased Ω-loop flexibility upon conjugation of fluorophore may have the potential to serve as a screening tool for novel β-lactamase inhibitors that target the Ω-loop and not the active site.

  15. Emerging trends in biosensing using stripping voltammetric detection of metal-containing nanolabels – A review

    Energy Technology Data Exchange (ETDEWEB)

    Kokkinos, Christos; Economou, Anastasios, E-mail: aeconomo@chem.uoa.gr

    2017-04-08

    Over the last years, nanomaterials have found many applications in the development of electrochemical biosensors. Among other functions, metal nanoparticles (NPs) and quantum dots (QDs) (semiconducting nanocrystals composed of metal salts) are increasingly being used as voltammetric labels in affinity biosensing. Labeling is based on the attachment of the label(s) on the target biomolecules or on a biorecognition reporting probe. After an appropriate specific affinity interaction between the target and the reporting probe, the metallic nanolabels are converted to the respective cations which are quantified by a voltammetric technique. The very use of metal-containing nanoprobes as labels provides a first amplification step since each nanoprobe can release a very significant number of detectable cations. When anodic stripping voltammetry (ASV) (in which a preconcentration step precedes the actual voltammetric scan) is further employed as the detection format, ultra-sensitive bioassays can be developed. The present paper reviews the emerging trends in affinity biosensing using ASV detection of metal-containing nanolabels. It provides a critical discussion of recent developments in ASV transduction and electrodes, novel strategies for signal enhancement, approaches for multiplexed detection as well as fluidics, paper-based and lab-on-a-chip devices. - Highlights: • This paper reviews the use of ASV for affinity biosensing with metal-containing nanolabels. • Both metal nanoparticles and quantum dots applications are considered. • Transducers and new electrode materials are covered. • Signal enhancement and multiplexing strategies are discussed. • Sensor arrays, paper-based, fluidic and lab-on-chip applications are described.

  16. Advanced materials for improving biosensing performances of propagating and localized plasmonic transducers

    Science.gov (United States)

    Manera, M. G.; Colombelli, A.; Convertino, A.; Rella, S.; De Lorenzis, E.; Taurino, A.; Malitesta, C.; Rella, R.

    2015-05-01

    Among all transduction methodologies reported in the field of solid state optical chemical sensors, the attention has been focused onto the optical sensing characterization by using propagating and localized surface plasmon resonance (SPR) techniques. The research in this field is always oriented in the improvement of the sensing features in terms of sensitivity and limits of detection. To this purpose different strategies have been proposed to realize advanced materials for high sensitive plasmonic devices. In this work nanostructured silica nanowires decorated by gold nanoparticles and active magneto-plasmonic transductors are considered as new biosensing transductors useful to increase the performance of sensitive devices.

  17. Optical and Electric Multifunctional CMOS Image Sensors for On-Chip Biosensing Applications

    Directory of Open Access Journals (Sweden)

    Kiyotaka Sasagawa

    2010-12-01

    Full Text Available In this review, the concept, design, performance, and a functional demonstration of multifunctional complementary metal-oxide-semiconductor (CMOS image sensors dedicated to on-chip biosensing applications are described. We developed a sensor architecture that allows flexible configuration of a sensing pixel array consisting of optical and electric sensing pixels, and designed multifunctional CMOS image sensors that can sense light intensity and electric potential or apply a voltage to an on-chip measurement target. We describe the sensors’ architecture on the basis of the type of electric measurement or imaging functionalities.

  18. Portable multispectral imaging system for oral cancer diagnosis

    Science.gov (United States)

    Hsieh, Yao-Fang; Ou-Yang, Mang; Lee, Cheng-Chung

    2013-09-01

    This study presents the portable multispectral imaging system that can acquire the image of specific spectrum in vivo for oral cancer diagnosis. According to the research literature, the autofluorescence of cells and tissue have been widely applied to diagnose oral cancer. The spectral distribution is difference for lesions of epithelial cells and normal cells after excited fluorescence. We have been developed the hyperspectral and multispectral techniques for oral cancer diagnosis in three generations. This research is the third generation. The excited and emission spectrum for the diagnosis are acquired from the research of first generation. The portable system for detection of oral cancer is modified for existing handheld microscope. The UV LED is used to illuminate the surface of oral cavity and excite the cells to produce fluorescent. The image passes through the central channel and filters out unwanted spectrum by the selection of filter, and focused by the focus lens on the image sensor. Therefore, we can achieve the specific wavelength image via fluorescence reaction. The specificity and sensitivity of the system are 85% and 90%, respectively.

  19. Theoretical and experimental investigation of multispectral photoacoustic osteoporosis detection method

    Science.gov (United States)

    Steinberg, Idan; Hershkovich, Hadas Sara; Gannot, Israel; Eyal, Avishay

    2014-03-01

    Osteoporosis is a widespread disorder, which has a catastrophic impact on patients lives and overwhelming related to healthcare costs. Recently, we proposed a multispectral photoacoustic technique for early detection of osteoporosis. Such technique has great advantages over pure ultrasonic or optical methods as it allows the deduction of both bone functionality from the bone absorption spectrum and bone resistance to fracture from the characteristics of the ultrasound propagation. We demonstrated the propagation of multiple acoustic modes in animal bones in-vitro. To further investigate the effects of multiple wavelength excitations and of induced osteoporosis on the PA signal a multispectral photoacoustic system is presented. The experimental investigation is based on measuring the interference of multiple acoustic modes. The performance of the system is evaluated and a simple two mode theoretical model is fitted to the measured phase signals. The results show that such PA technique is accurate and repeatable. Then a multiple wavelength excitation is tested. It is shown that the PA response due to different excitation wavelengths revels that absorption by the different bone constitutes has a profound effect on the mode generation. The PA response is measured in single wavelength before and after induced osteoporosis. Results show that induced osteoporosis alters the measured amplitude and phase in a consistent manner which allows the detection of the onset of osteoporosis. These results suggest that a complete characterization of the bone over a region of both acoustic and optical frequencies might be used as a powerful tool for in-vivo bone evaluation.

  20. An Algorithm for Pedestrian Detection in Multispectral Image Sequences

    Science.gov (United States)

    Kniaz, V. V.; Fedorenko, V. V.

    2017-05-01

    The growing interest for self-driving cars provides a demand for scene understanding and obstacle detection algorithms. One of the most challenging problems in this field is the problem of pedestrian detection. Main difficulties arise from a diverse appearances of pedestrians. Poor visibility conditions such as fog and low light conditions also significantly decrease the quality of pedestrian detection. This paper presents a new optical flow based algorithm BipedDetet that provides robust pedestrian detection on a single-borad computer. The algorithm is based on the idea of simplified Kalman filtering suitable for realization on modern single-board computers. To detect a pedestrian a synthetic optical flow of the scene without pedestrians is generated using slanted-plane model. The estimate of a real optical flow is generated using a multispectral image sequence. The difference of the synthetic optical flow and the real optical flow provides the optical flow induced by pedestrians. The final detection of pedestrians is done by the segmentation of the difference of optical flows. To evaluate the BipedDetect algorithm a multispectral dataset was collected using a mobile robot.

  1. Portable Multispectral Colorimeter for Metallic Ion Detection and Classification.

    Science.gov (United States)

    Braga, Mauro S; Jaimes, Ruth F V V; Borysow, Walter; Gomes, Osmar F; Salcedo, Walter J

    2017-07-28

    This work deals with a portable device system applied to detect and classify different metallic ions as proposed and developed, aiming its application for hydrological monitoring systems such as rivers, lakes and groundwater. Considering the system features, a portable colorimetric system was developed by using a multispectral optoelectronic sensor. All the technology of quantification and classification of metallic ions using optoelectronic multispectral sensors was fully integrated in the embedded hardware FPGA ( Field Programmable Gate Array) technology and software based on virtual instrumentation (NI LabView ® ). The system draws on an indicative colorimeter by using the chromogen reagent of 1-(2-pyridylazo)-2-naphthol (PAN). The results obtained with the signal processing and pattern analysis using the method of the linear discriminant analysis, allows excellent results during detection and classification of Pb(II), Cd(II), Zn(II), Cu(II), Fe(III) and Ni(II) ions, with almost the same level of performance as for those obtained from the Ultravioled and visible (UV-VIS) spectrophotometers of high spectral resolution.

  2. Portable Multispectral Colorimeter for Metallic Ion Detection and Classification

    Directory of Open Access Journals (Sweden)

    Mauro S. Braga

    2017-07-01

    Full Text Available This work deals with a portable device system applied to detect and classify different metallic ions as proposed and developed, aiming its application for hydrological monitoring systems such as rivers, lakes and groundwater. Considering the system features, a portable colorimetric system was developed by using a multispectral optoelectronic sensor. All the technology of quantification and classification of metallic ions using optoelectronic multispectral sensors was fully integrated in the embedded hardware FPGA ( Field Programmable Gate Array technology and software based on virtual instrumentation (NI LabView®. The system draws on an indicative colorimeter by using the chromogen reagent of 1-(2-pyridylazo-2-naphthol (PAN. The results obtained with the signal processing and pattern analysis using the method of the linear discriminant analysis, allows excellent results during detection and classification of Pb(II, Cd(II, Zn(II, Cu(II, Fe(III and Ni(II ions, with almost the same level of performance as for those obtained from the Ultravioled and visible (UV-VIS spectrophotometers of high spectral resolution.

  3. Automatic Hotspot and Sun Glint Detection in UAV Multispectral Images.

    Science.gov (United States)

    Ortega-Terol, Damian; Hernandez-Lopez, David; Ballesteros, Rocio; Gonzalez-Aguilera, Diego

    2017-10-15

    Last advances in sensors, photogrammetry and computer vision have led to high-automation levels of 3D reconstruction processes for generating dense models and multispectral orthoimages from Unmanned Aerial Vehicle (UAV) images. However, these cartographic products are sometimes blurred and degraded due to sun reflection effects which reduce the image contrast and colour fidelity in photogrammetry and the quality of radiometric values in remote sensing applications. This paper proposes an automatic approach for detecting sun reflections problems (hotspot and sun glint) in multispectral images acquired with an Unmanned Aerial Vehicle (UAV), based on a photogrammetric strategy included in a flight planning and control software developed by the authors. In particular, two main consequences are derived from the approach developed: (i) different areas of the images can be excluded since they contain sun reflection problems; (ii) the cartographic products obtained (e.g., digital terrain model, orthoimages) and the agronomical parameters computed (e.g., normalized vegetation index-NVDI) are improved since radiometric defects in pixels are not considered. Finally, an accuracy assessment was performed in order to analyse the error in the detection process, getting errors around 10 pixels for a ground sample distance (GSD) of 5 cm which is perfectly valid for agricultural applications. This error confirms that the precision in the detection of sun reflections can be guaranteed using this approach and the current low-cost UAV technology.

  4. Adaptive Residual Interpolation for Color and Multispectral Image Demosaicking.

    Science.gov (United States)

    Monno, Yusuke; Kiku, Daisuke; Tanaka, Masayuki; Okutomi, Masatoshi

    2017-12-01

    Color image demosaicking for the Bayer color filter array is an essential image processing operation for acquiring high-quality color images. Recently, residual interpolation (RI)-based algorithms have demonstrated superior demosaicking performance over conventional color difference interpolation-based algorithms. In this paper, we propose adaptive residual interpolation (ARI) that improves existing RI-based algorithms by adaptively combining two RI-based algorithms and selecting a suitable iteration number at each pixel. These are performed based on a unified criterion that evaluates the validity of an RI-based algorithm. Experimental comparisons using standard color image datasets demonstrate that ARI can improve existing RI-based algorithms by more than 0.6 dB in the color peak signal-to-noise ratio and can outperform state-of-the-art algorithms based on training images. We further extend ARI for a multispectral filter array, in which more than three spectral bands are arrayed, and demonstrate that ARI can achieve state-of-the-art performance also for the task of multispectral image demosaicking.

  5. SENSOR CORRECTION AND RADIOMETRIC CALIBRATION OF A 6-BAND MULTISPECTRAL IMAGING SENSOR FOR UAV REMOTE SENSING

    Directory of Open Access Journals (Sweden)

    J. Kelcey

    2012-07-01

    Full Text Available The increased availability of unmanned aerial vehicles (UAVs has resulted in their frequent adoption for a growing range of remote sensing tasks which include precision agriculture, vegetation surveying and fine-scale topographic mapping. The development and utilisation of UAV platforms requires broad technical skills covering the three major facets of remote sensing: data acquisition, data post-processing, and image analysis. In this study, UAV image data acquired by a miniature 6-band multispectral imaging sensor was corrected and calibrated using practical image-based data post-processing techniques. Data correction techniques included dark offset subtraction to reduce sensor noise, flat-field derived per-pixel look-up-tables to correct vignetting, and implementation of the Brown- Conrady model to correct lens distortion. Radiometric calibration was conducted with an image-based empirical line model using pseudo-invariant features (PIFs. Sensor corrections and radiometric calibration improve the quality of the data, aiding quantitative analysis and generating consistency with other calibrated datasets.

  6. A multispectral scanner survey of the Rocky Flats Environmental Technology Site and surrounding area, Golden, Colorado

    International Nuclear Information System (INIS)

    Brewster, S.B. Jr.; Brickey, D.W.; Ross, S.L.; Shines, J.E.

    1997-04-01

    Aerial multispectral scanner imagery was collected of the Rocky Flats Environmental Technology Site in Golden, Colorado, on June 3, 5, 6, and 7, 1994, using a Daedalus AADS1268 multispectral scanner and coincident aerial color and color infrared photography. Flight altitudes were 4,500 feet (1372 meters) above ground level to match prior 1989 survey data; 2,000 feet (609 meters) above ground level for sitewide vegetation mapping; and 1,000 feet (304 meters) above ground level for selected areas of special interest. A multispectral survey was initiated to improve the existing vegetation classification map, to identify seeps and springs, and to generate ARC/INFO Geographic Information System compatible coverages of the vegetation and wetlands for the entire site including the buffer zone. The multispectral scanner imagery and coincident aerial photography were analyzed for the detection, identification, and mapping of vegetation and wetlands. The multispectral scanner data were processed digitally while the color and color infrared photography were manually photo-interpreted to define vegetation and wetlands. Several standard image enhancement techniques were applied to the multispectral scanner data to assist image interpretation. A seep enhancement was applied and a color composite consisting of multispectral scanner channels 11, 7, and 5 (thermal infrared, mid-infrared, and red bands, respectively) proved most useful for detecting seeps, seep zones, and springs. The predawn thermal infrared data were also useful in identifying and locating seeps. The remote sensing data, mapped wetlands, and ancillary Geographic Information System compatible data sets were spatially analyzed for seeps

  7. Polarization-induced local pore-wall functionalization for biosensing: from micropore to nanopore.

    Science.gov (United States)

    Liu, Jie; Pham, Pascale; Haguet, Vincent; Sauter-Starace, Fabien; Leroy, Loïc; Roget, André; Descamps, Emeline; Bouchet, Aurélie; Buhot, Arnaud; Mailley, Pascal; Livache, Thierry

    2012-04-03

    The use of biological-probe-modified solid-state pores in biosensing is currently hindered by difficulties in pore-wall functionalization. The surface to be functionalized is small and difficult to target and is usually chemically similar to the bulk membrane. Herein, we demonstrate the contactless electrofunctionalization (CLEF) approach and its mechanism. This technique enables the one-step local functionalization of the single pore wall fabricated in a silica-covered silicon membrane. CLEF is induced by polarization of the pore membrane in an electric field and requires a sandwich-like composition and a conducting or semiconducting core for the pore membrane. The defects in the silica layer of the micropore wall enable the creation of an electric pathway through the silica layer, which allows electrochemical reactions to take place locally on the pore wall. The pore diameter is not a limiting factor for local wall modification using CLEF. Nanopores with a diameter of 200 nm fabricated in a silicon membrane and covered with native silica layer have been successfully functionalized with this method, and localized pore-wall modification was obtained. Furthermore, through proof-of-concept experiments using ODN-modified nanopores, we show that functionalized nanopores are suitable for translocation-based biosensing.

  8. Preparation, Modification, Characterization, and Biosensing Application of Nanoporous Gold Using Electrochemical Techniques.

    Science.gov (United States)

    Bhattarai, Jay K; Neupane, Dharmendra; Nepal, Bishal; Mikhaylov, Vasilii; Demchenko, Alexei V; Stine, Keith J

    2018-03-16

    Nanoporous gold (np-Au), because of its high surface area-to-volume ratio, excellent conductivity, chemical inertness, physical stability, biocompatibility, easily tunable pores, and plasmonic properties, has attracted much interested in the field of nanotechnology. It has promising applications in the fields of catalysis, bio/chemical sensing, drug delivery, biomolecules separation and purification, fuel cell development, surface-chemistry-driven actuation, and supercapacitor design. Many chemical and electrochemical procedures are known for the preparation of np-Au. Recently, researchers are focusing on easier and controlled ways to tune the pores and ligaments size of np-Au for its use in different applications. Electrochemical methods have good control over fine-tuning pore and ligament sizes. The np-Au electrodes that are prepared using electrochemical techniques are robust and are easier to handle for their use in electrochemical biosensing. Here, we review different electrochemical strategies for the preparation, post-modification, and characterization of np-Au along with the synergistic use of both electrochemistry and np-Au for applications in biosensing.

  9. Preparation, Modification, Characterization, and Biosensing Application of Nanoporous Gold Using Electrochemical Techniques

    Directory of Open Access Journals (Sweden)

    Jay K. Bhattarai

    2018-03-01

    Full Text Available Nanoporous gold (np-Au, because of its high surface area-to-volume ratio, excellent conductivity, chemical inertness, physical stability, biocompatibility, easily tunable pores, and plasmonic properties, has attracted much interested in the field of nanotechnology. It has promising applications in the fields of catalysis, bio/chemical sensing, drug delivery, biomolecules separation and purification, fuel cell development, surface-chemistry-driven actuation, and supercapacitor design. Many chemical and electrochemical procedures are known for the preparation of np-Au. Recently, researchers are focusing on easier and controlled ways to tune the pores and ligaments size of np-Au for its use in different applications. Electrochemical methods have good control over fine-tuning pore and ligament sizes. The np-Au electrodes that are prepared using electrochemical techniques are robust and are easier to handle for their use in electrochemical biosensing. Here, we review different electrochemical strategies for the preparation, post-modification, and characterization of np-Au along with the synergistic use of both electrochemistry and np-Au for applications in biosensing.

  10. Biosensing utilizing the motion of magnetic microparticles in a microfluidic system

    KAUST Repository

    Giouroudi, Ioanna

    2010-10-23

    The study for the design of a compact and inexpensive biosensing device, which can be operated either by primary care personnel or by patients as opposed to skilled operators, is presented. The main parts of the proposed device are a microfluidic channel, permanent magnets and functionalized magnetic microparticles. The innovative aspect of the proposed biosensing method is that it utilizes the volumetric increase of magnetic microparticles when analyte binds to their surface. Their velocity decreases drastically when they are accelerated by an externally applied magnetic force within a microfluidic channel. This effect is utilized to detect the presence of analyte e.g. microbes. Analytical calculations showed that a decrease in velocity of approximately 23% can be achieved due to the volumetric change of a magnetic microparticle of View the MathML source1μm diameter when HIV virions of approximately View the MathML source0,135μm are bound to its surface and by keeping its magnetic properties the same. Preliminary experiments were carried out utilizing superparamagnetic microparticles coated with streptavidin and polystyrene microparticles coated with biotin.

  11. Investigation of molybdenum-crosslinker interfaces for affinity based electrochemical biosensing applications

    Science.gov (United States)

    Kamakoti, Vikramshankar; Shanmugam, Nandhinee Radha; Tanak, Ambalika Sanjeev; Jagannath, Badrinath; Prasad, Shalini

    2018-04-01

    Molybdenum (Mo) has been investigated for implementation as an electrode material for affinity based biosensing towards devloping flexibe electronic biosensors. Treatment of the native oxide of molybdenum was investigated through two surface treatment strategies namely thiol and carbodiimide crosslinking methods. The binding interaction between cross-linker molecules and Mo electrode surface has been characterized using Fourier Transform Infrared Spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS) and optical microscopy. The efficacy of treatment of Mo with its native oxide using carbodiimide cross linking methodology was established. The carbodiimide cross-linking chemistry was found to possess better surface coverage and binding affinity with Molybdenum electrode surface when compared to thiol cross-linking chemistry.Electrochemical characterization of Mo electrode using Electrochemical Impedance Spectroscopy (EIS) and Cyclic Voltametry (CV) techniques was performed to evaluate the effect of ionic properties of solution buffer on the Mo electrode's performance. Affinity based biosensing of C-Reactive Protein (CRP) has been demonstrated on a flexible nanoporous polymeric substrate with detection threshold of 100 pg/ml in synthetic urine buffer medium. The biosensor has been evaluated to be developed as a dipstick based point of care device for detection of biomarkers in urine.

  12. A Graphene-Based Biosensing Platform Based on Regulated Release of an Aptameric DNA Biosensor.

    Science.gov (United States)

    Mao, Yu; Chen, Yongli; Li, Song; Lin, Shuo; Jiang, Yuyang

    2015-11-09

    A novel biosensing platform was developed by integrating an aptamer-based DNA biosensor with graphene oxide (GO) for rapid and facile detection of adenosine triphosphate (ATP, as a model target). The DNA biosensor, which is locked by GO, is designed to contain two sensing modules that include recognition site for ATP and self-replication track that yields the nicking domain for Nt.BbvCI. By taking advantage of the different binding affinity of single-stranded DNA, double-stranded DNA and aptamer-target complex toward GO, the DNA biosensor could be efficiently released from GO in the presence of target with the help of a complementary DNA strand (CPDNA) that partially hybridizes to the DNA biosensor. Then, the polymerization/nicking enzyme synergetic isothermal amplification could be triggered, leading to the synthesis of massive DNA amplicons, thus achieving an enhanced sensitivity with a wide linear dynamic response range of four orders of magnitude and good selectivity. This biosensing strategy expands the applications of GO-DNA nanobiointerfaces in biological sensing, showing great potential in fundamental research and biomedical diagnosis.

  13. Graphene Nanosheets/Poly(3,4-ethylenedioxythiophene) Nanotubes Composite Materials for Electrochemical Biosensing Applications

    International Nuclear Information System (INIS)

    Huang, Tzu-Yen; Kung, Chung-Wei; Wang, Jen-Yuan; Lee, Min-Han; Chen, Lin-Chi; Chu, Chih-Wei; Ho, Kuo-Chuan

    2015-01-01

    Highlights: • Novel composite materials contain 2D rGO nanosheets and 1D PEDOT nanotubes. • 3D nanocomposite film effectively improved the sensitivity for analyte detection. • The rGO/PEDOT NTs film shows good catalytic activities toward hydrazine and H 2 O 2 . • The rGO/PEDOT NTs film also exhibits high selectivity from the interference test. -- Graphical abstract: Display Omitted -- Abstract: In this study, we developed the novel composite materials containing reduced graphene oxide (rGO) nanosheets and poly(3,4-ethylenedioxythiophene) nanotubes (PEDOT NTs) for electrochemical biosensing applications. Transmission electron microscopy, scanning electron microscopy and atomic force microscopy suggested that the rGO nanosheets cover the substrate uniformly, and the PEDOT NTs act as a conducting bridge to connect the rGO sheets. By combining the two materials, it's expected to enhance the conductivity of the film and improve the surface coverage. We applied the rGO/PEDOT NTs composite for electrochemical detection of hydrazine and hydrogen peroxide; noticeable improvements in electrochemical activity and reactivity were observed compared to those of the pristine rGO and PEDOT NTs electrodes. This may be attributed to the better surface coverage of the rGO/PEDOT NTs modified electrode with superior conductivity. Furthermore, interference tests indicate that the rGO/PEDOT NTs composite film exhibits high selectivity toward the analyte. The rGO/PEDOT NTs composite thus provides a potential platform for biosensing applications

  14. FT-IR microspectroscopy characterization of supports for enzyme immobilization in biosensing applications

    Science.gov (United States)

    Portaccio, M.; Della Ventura, B.; Gabrovska, K.; Marinov, I.; Godjevargova, T.; Mita, D. G.; Lepore, M.

    2010-04-01

    The investigation of materials suitable for enzyme immobilization in biosensing applications has a widespread interest. There are many studies on physico-chemical properties of these materials at macroscopic level but few studies have been devoted to examine and correlate these properties at microscopic level. FT-IR spectroscopy with Micro-Attenuated Total Reflection (Micro-ATR) approach can be extremely useful for understanding a variety of aspects of materials which can be used for optimising immobilization procedures. Moreover, this experimental approach is particularly simple to use (no sample preparation is required) and minimally invasive. Using a Perkin Elmer Spectrum One FT-IR spectrometer equipped with a mercury-cadmium-telluride detector and a micro-ATR element we investigated different materials used for immobilization procedures with various enzymes widely used for biosensing in environmental and clinical applications. In particular, composite membranes constituted by a chemically modified poly-acrylonitrile (PAN) membrane plus layers of tethered chitosan of different molecular weight have been examined. Also silica gel matrices without and with glucose oxidase have been investigated. Spectra have been analysed and the contribution of principal functional groups has been evidenced.

  15. Optical detection of Prorocentrum donghaiense blooms based on multispectral reflectance

    Institute of Scientific and Technical Information of China (English)

    TAO Bangyi; PAN Delu; MAO Zhihua; SHEN Yuzhang; ZHU Qiankun; CHEN Jianyu

    2013-01-01

    Prorocentrum donghaiense is one of the most common red tide causative dinoflagellates in the Changjiang (Yangtze) River Estuary and the adjacent area of the East China Sea. It causes large-scale blooms in late spring and early summer that lead to widespread ecologic and economic damage. A means for distinguish-ing dinoflagellate blooms from diatom (Skeletonema costatum) blooms is desired. On the basis of measure-ments of remote sensing reflectance [Rrs(λ)] and inherent optical parameters, the potential of using a mul-tispectral approach is assessed for discriminating the algal blooms due to P. donghaiense from those due to S. costatum. The behavior of two reflectance ratios [R1 =Rrs(560)/Rrs(532) and R2 =Rrs(708)/Rrs(665)], suggests that differentiation of P. donghaiense blooms from diatom bloom types is possible from the current band setup of ocean color sensors. It is found that there are two reflectance ratio regimes that indicate a bloom is dominated by P. donghaiense: (1) R1 >1.55 and R2 1.75 and R2 ?1.0. Various sensitivity analyses are conducted to investigate the effects of the variation in varying levels of chlorophyll concentration and colored dissolved organic matter (CDOM) as well as changes in the backscattering ratio (bbp/bp) on the efficacy of this multispectral approach. Results indicate that the intensity and inherent op-tical properties of the algal species explain much of the behavior of the two ratios. Although backscattering influences the amplitude of Rrs(λ), especially in the 530 and 560 nm bands, the discrimination between P. donghaiense and diatoms is not significantly affected by the variation of bbp/bp. Since a CDOM(440) in coastal areas of the ECS is typically lower than 1.0 m−1 in most situations, the presence of CDOM does not interfere with this discrimination, even as SCDOM varies from 0.01 to 0.026 nm−1. Despite all of these effects, the dis-crimination of P. donghaiense blooms from diatom blooms based on multispectral

  16. Multispectral UV imaging for determination of the tablet coating thickness

    DEFF Research Database (Denmark)

    Novikova, Anna; Carstensen, Jens Michael; Zeitler, J. Axel

    2017-01-01

    The applicability of off-line multispectral ultraviolet (UV) imaging in combination with multivariate data analysis was investigated to determine the coating thickness and its distribution on the tablet surface during lab scale coating. The UV imaging results were compared with the weight gain...... measured for each individual tablet and the corresponding coating thickness and its distribution measured by terahertz pulsed imaging (TPI). Three different tablet formulations were investigated, two of which contained UV active tablet cores. Three coating formulations were applied: Aquacoat® ECD (a mainly...... translucent coating) and Eudragit® NE (a turbid coating containing solid particles). It was shown that UV imaging is a fast and non-destructive method to predict individual tablet weight gain as well as coating thickness. The coating thickness distribution profiles determined by UV imaging correlated...

  17. Application of support vector machine for classification of multispectral data

    International Nuclear Information System (INIS)

    Bahari, Nurul Iman Saiful; Ahmad, Asmala; Aboobaider, Burhanuddin Mohd

    2014-01-01

    In this paper, support vector machine (SVM) is used to classify satellite remotely sensed multispectral data. The data are recorded from a Landsat-5 TM satellite with resolution of 30x30m. SVM finds the optimal separating hyperplane between classes by focusing on the training cases. The study area of Klang Valley has more than 10 land covers and classification using SVM has been done successfully without any pixel being unclassified. The training area is determined carefully by visual interpretation and with the aid of the reference map of the study area. The result obtained is then analysed for the accuracy and visual performance. Accuracy assessment is done by determination and discussion of Kappa coefficient value, overall and producer accuracy for each class (in pixels and percentage). While, visual analysis is done by comparing the classification data with the reference map. Overall the study shows that SVM is able to classify the land covers within the study area with a high accuracy

  18. Multispectral analysis and cone signal modelling of pseudoisochromatic test plates

    International Nuclear Information System (INIS)

    Luse, K; Ozolinsh, M; Gutmane, A; Fomins, S

    2013-01-01

    The aim of the study is to determine the consistency of the desired colour reproduction of the stimuli using calibrated printing technology available to anyone (EpsonStylus Pro 7800 printer was). 24 colour vision assessment plates created in the University of Latvia were analysed right after their fabrication on august 2012 and after intense use for 7 months (colour vision screening on 700 people). Multispectral imagery results indicate that the alignment of the samples after seven months of use has maintained on the CIExy confusion lines of deutan deficiency type, but the shift towards achromatic area in the diagram indicate decrease in the total colour difference (ΔE* ab ) of test background (achromatic) areas and stimuli (chromatic) areas, thus affecting the testing outcome and deficiency severity level classification ability of the plates

  19. Development of a multispectral autoradiography using a coded aperture

    Science.gov (United States)

    Noto, Daisuke; Takeda, Tohoru; Wu, Jin; Lwin, Thet T.; Yu, Quanwen; Zeniya, Tsutomu; Yuasa, Tetsuya; Hiranaka, Yukio; Itai, Yuji; Akatsuka, Takao

    2000-11-01

    Autoradiography is a useful imaging technique to understand biological functions using tracers including radio isotopes (RI's). However, it is not easy to describe the distribution of different kinds of tracers simultaneously by conventional autoradiography using X-ray film or Imaging plate. Each tracer describes each corresponding biological function. Therefore, if we can simultaneously estimate distribution of different kinds of tracer materials, the multispectral autoradiography must be a quite powerful tool to better understand physiological mechanisms of organs. So we are developing a system using a solid state detector (SSD) with high energy- resolution. Here, we introduce an imaging technique with a coded aperture to get spatial and spectral information more efficiently. In this paper, the imaging principle is described, and its validity and fundamental property are discussed by both simulation and phantom experiments with RI's such as 201Tl, 99mTc, 67Ga, and 123I.

  20. Some aspects of adaptive transform coding of multispectral data

    Science.gov (United States)

    Ahmed, N.; Natarajan, T.

    1977-01-01

    This paper concerns a data compression study pertaining to multi-spectral scanner (MSS) data. The motivation for this undertaking is the need for securing data compression of images obtained in connection with the Landsat Follow-On Mission, where a compression of at least 6:1 is required. The MSS data used in this study consisted of four scenes: Tristate, consisting of 256 pels per row and a total of 512 rows - i.e., (256x512), (2) Sacramento (256x512), (3) Portland (256x512), and (4) Bald Knob (200x256). All these scenes were on digital tape at 6 bits/pel. The corresponding reconstructed scenes of 1 bit/pel (i.e., a 6:1 compression) are included.

  1. Pulsed Raman fiber laser and multispectral imaging in three dimensions

    DEFF Research Database (Denmark)

    Andersen, Joachim F.; Busck, Jens; Heiselberg, Henning

    2006-01-01

    Raman scattering in single-mode optical fibers is exploited to generate multispectral light from a green nanolaser with high pulse repetition rate. Each pulse triggers a picosecond camera and measures the distance by time-of-flight in each of the 0.5 Mpixels. Three-dimensional images...... are then constructed with submillimeter accuracy for all visible colors. The generation of a series of Stokes peaks by Raman scattering in a Si fiber is discussed in detail and the laser radar technique is demonstrated. The data recording takes only a few seconds, and the high accuracy 3D color imaging works at ranges...... up to ∼200 m. Applications for optical tomography in highly scattering media such as water and human tissue are mentioned. © 2006 Optical Society of America....

  2. Multi-spectral pyrometer for gas turbine blade temperature measurement

    Science.gov (United States)

    Gao, Shan; Wang, Lixin; Feng, Chi

    2014-09-01

    To achieve the highest possible turbine inlet temperature requires to accurately measuring the turbine blade temperature. If the temperature of blade frequent beyond the design limits, it will seriously reduce the service life. The problem for the accuracy of the temperature measurement includes the value of the target surface emissivity is unknown and the emissivity model is variability and the thermal radiation of the high temperature environment. In this paper, the multi-spectral pyrometer is designed provided mainly for range 500-1000°, and present a model corrected in terms of the error due to the reflected radiation only base on the turbine geometry and the physical properties of the material. Under different working conditions, the method can reduce the measurement error from the reflect radiation of vanes, make measurement closer to the actual temperature of the blade and calculating the corresponding model through genetic algorithm. The experiment shows that this method has higher accuracy measurements.

  3. Dual-emissive quantum dots for multispectral intraoperative fluorescence imaging.

    Science.gov (United States)

    Chin, Patrick T K; Buckle, Tessa; Aguirre de Miguel, Arantxa; Meskers, Stefan C J; Janssen, René A J; van Leeuwen, Fijs W B

    2010-09-01

    Fluorescence molecular imaging is rapidly increasing its popularity in image guided surgery applications. To help develop its full surgical potential it remains a challenge to generate dual-emissive imaging agents that allow for combined visible assessment and sensitive camera based imaging. To this end, we now describe multispectral InP/ZnS quantum dots (QDs) that exhibit a bright visible green/yellow exciton emission combined with a long-lived far red defect emission. The intensity of the latter emission was enhanced by X-ray irradiation and allows for: 1) inverted QD density dependent defect emission intensity, showing improved efficacies at lower QD densities, and 2) detection without direct illumination and interference from autofluorescence. Copyright 2010 Elsevier Ltd. All rights reserved.

  4. Multispectral Photogrammetric Data Acquisition and Processing Forwall Paintings Studies

    Science.gov (United States)

    Pamart, A.; Guillon, O.; Faraci, S.; Gattet, E.; Genevois, M.; Vallet, J. M.; De Luca, L.

    2017-02-01

    In the field of wall paintings studies different imaging techniques are commonly used for the documentation and the decision making in term of conservation and restoration. There is nowadays some challenging issues to merge scientific imaging techniques in a multimodal context (i.e. multi-sensors, multi-dimensions, multi-spectral and multi-temporal approaches). For decades those CH objects has been widely documented with Technical Photography (TP) which gives precious information to understand or retrieve the painting layouts and history. More recently there is an increasing demand of the use of digital photogrammetry in order to provide, as one of the possible output, an orthophotomosaic which brings a possibility for metrical quantification of conservators/restorators observations and actions planning. This paper presents some ongoing experimentations of the LabCom MAP-CICRP relying on the assumption that those techniques can be merged through a common pipeline to share their own benefits and create a more complete documentation.

  5. Fast Multispectral Fireball Analyses and the Relation to Particles’ Aerosolization

    International Nuclear Information System (INIS)

    Sharon, A.; Halevy, I.; Sattinger, D.; Berenstein, Z.; Neuman, R.; Banaim, P.; Pinhas, M.; Yaar, I.

    2014-01-01

    One of the key questions in analyzing the consequent risk following an explosion of radiological dispersal device (RDD) is the final radioactive particles’ size distribution caused by the detonation. Fine, respirable, aerosols behave different when compare it to large, non respirable, aerosols or to inertial particles. While aerosols (both, respirable and non respirable) are trapped inside the detonation cloud moving downwind with the cloud, heavier, inertial particles escape the initial fireball and settled on the ground at a short distances due to hydrodynamic drug. Respirable aerosols are mostly risky when inhaled into the body (internal radiation) while non respirable are risky as an external exposure agents (both on the skin and from a distance). Knowing the size distribution of the radioactive particles will, thus, enable more realistic risk assessment predictions of such events. Fast multispectral radiometry of detonation fireballs can be used as novel tool for the estimation of the RA material final size distribution

  6. Spatial clustering of pixels of a multispectral image

    Science.gov (United States)

    Conger, James Lynn

    2014-08-19

    A method and system for clustering the pixels of a multispectral image is provided. A clustering system computes a maximum spectral similarity score for each pixel that indicates the similarity between that pixel and the most similar neighboring. To determine the maximum similarity score for a pixel, the clustering system generates a similarity score between that pixel and each of its neighboring pixels and then selects the similarity score that represents the highest similarity as the maximum similarity score. The clustering system may apply a filtering criterion based on the maximum similarity score so that pixels with similarity scores below a minimum threshold are not clustered. The clustering system changes the current pixel values of the pixels in a cluster based on an averaging of the original pixel values of the pixels in the cluster.

  7. A Multispectral Micro-Imager for Lunar Field Geology

    Science.gov (United States)

    Nunez, Jorge; Farmer, Jack; Sellar, Glenn; Allen, Carlton

    2009-01-01

    Field geologists routinely assign rocks to one of three basic petrogenetic categories (igneous, sedimentary or metamorphic) based on microtextural and mineralogical information acquired with a simple magnifying lens. Indeed, such observations often comprise the core of interpretations of geological processes and history. The Multispectral Microscopic Imager (MMI) uses multi-wavelength, light-emitting diodes (LEDs) and a substrate-removed InGaAs focal-plane array to create multispectral, microscale reflectance images of geological samples (FOV 32 X 40 mm). Each pixel (62.5 microns) of an image is comprised of 21 spectral bands that extend from 470 to 1750 nm, enabling the discrimination of a wide variety of rock-forming minerals, especially Fe-bearing phases. MMI images provide crucial context information for in situ robotic analyses using other onboard analytical instruments (e.g. XRD), or for the selection of return samples for analysis in terrestrial labs. To further assess the value of the MMI as a tool for lunar exploration, we used a field-portable, tripod-mounted version of the MMI to image a variety of Apollo samples housed at the Lunar Experiment Laboratory, NASA s Johnson Space Center. MMI images faithfully resolved the microtextural features of samples, while the application of ENVI-based spectral end member mapping methods revealed the distribution of Fe-bearing mineral phases (olivine, pyroxene and magnetite), along with plagioclase feldspars within samples. Samples included a broad range of lithologies and grain sizes. Our MMI-based petrogenetic interpretations compared favorably with thin section-based descriptions published in the Lunar Sample Compendium, revealing the value of MMI images for astronaut and rover-mediated lunar exploration.

  8. Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging

    International Nuclear Information System (INIS)

    Chaudhari, Abhijit J; Darvas, Felix; Bading, James R; Moats, Rex A; Conti, Peter S; Smith, Desmond J; Cherry, Simon R; Leahy, Richard M

    2005-01-01

    For bioluminescence imaging studies in small animals, it is important to be able to accurately localize the three-dimensional (3D) distribution of the underlying bioluminescent source. The spectrum of light produced by the source that escapes the subject varies with the depth of the emission source because of the wavelength-dependence of the optical properties of tissue. Consequently, multispectral or hyperspectral data acquisition should help in the 3D localization of deep sources. In this paper, we describe a framework for fully 3D bioluminescence tomographic image acquisition and reconstruction that exploits spectral information. We describe regularized tomographic reconstruction techniques that use semi-infinite slab or FEM-based diffusion approximations of photon transport through turbid media. Singular value decomposition analysis was used for data dimensionality reduction and to illustrate the advantage of using hyperspectral rather than achromatic data. Simulation studies in an atlas-mouse geometry indicated that sub-millimeter resolution may be attainable given accurate knowledge of the optical properties of the animal. A fixed arrangement of mirrors and a single CCD camera were used for simultaneous acquisition of multispectral imaging data over most of the surface of the animal. Phantom studies conducted using this system demonstrated our ability to accurately localize deep point-like sources and show that a resolution of 1.5 to 2.2 mm for depths up to 6 mm can be achieved. We also include an in vivo study of a mouse with a brain tumour expressing firefly luciferase. Co-registration of the reconstructed 3D bioluminescent image with magnetic resonance images indicated good anatomical localization of the tumour

  9. Determining quality and maturity of pomegranates using multispectral imaging

    Directory of Open Access Journals (Sweden)

    Rasool Khodabakhshian

    2017-10-01

    Full Text Available In this paper, we investigated the use of multispectral imaging technique to quantify pomegranate fruit quality. Three quality factors including total soluble solids (TSS, pH and firmness were studied at four different maturity stages of 88, 109, 124 and 143 days after full bloom (DAFB and were correlated with the spectral information extracted from images taken at four wavelength spectra. TSS, pH and firmness of the same samples were recorded using nondestructive methods and then modeled with their corresponding spectral data using partial least squire regression (PLSR. The correlation coefficient (r, RMSEC and RPD for the calibration models was found to be: r = 0.97, RMSEC = 0.21 °Brix and RPD = 6.7 °Brix for TSS; r = 0.93, RMSEC = 0.035 and RPD = 5.01 for pH; r = 0.95, RMSEC = 0.65 N and RPD = 5.65 N for firmness. Also these parameters for the validation models were as follows: r = 0.97, RMSEP = 0.22 °Brix and RPD = 5.77 °Brix for TSS; r = 0.94, RMSEP = 0.038 and RPD = 4.98 for pH; r = 0.94, RMSEP = 0.68 N and RPD = 5.33 N for firmness. The results demonstrated the capability of multispectral imaging and chemometrics as useful techniques to nondestructively monitoring pomegranate main quality attributes.

  10. Preliminary PCA/TT Results on MRO CRISM Multispectral Images

    Science.gov (United States)

    Klassen, David R.; Smith, M. D.

    2010-10-01

    Mars Reconnaissance Orbiter arrived at Mars in March 2006 and by September had achieved its science-phase orbit with the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) beginning its visible to near-infrared (VIS/NIR) spectral imaging shortly thereafter. One goal of CRISM is to fill in the spatial gaps between the various targeted observations, eventually mapping the entire surface. Due to the large volume of data this would create, the instrument works in a reduced spectral sampling mode creating "multispectral” images. From these data we can create image cubes using 64 wavelengths from 0.410 to 3.923 µm. We present here our analysis of these multispectral mode data products using Principal Components Analysis (PCA) and Target Transformation (TT) [1]. Previous work with ground-based images [2-5] has shown that over an entire visible hemisphere, there are only three to four meaningful components using 32-105 wavelengths over 1.5-4.1 µm the first two are consistent over all temporal scales. The TT retrieved spectral endmembers show nearly the same level of consistency [5]. The preliminary work on the CRISM images cubes implies similar results; three to four significant principal components that are fairly consistent over time. These components are then used in TT to find spectral endmembers which can be used to characterize the surface reflectance for future use in radiative transfer cloud optical depth retrievals. We present here the PCA/TT results comparing the principal components and recovered endmembers from six reconstructed CRISM multi-spectral image cubes. References: [1] Bandfield, J. L., et al. (2000) JGR, 105, 9573. [2] Klassen, D. R. and Bell III, J. F. (2001) BAAS 33, 1069. [3] Klassen, D. R. and Bell III, J. F. (2003) BAAS, 35, 936. [4] Klassen, D. R., Wark, T. J., Cugliotta, C. G. (2005) BAAS, 37, 693. [5] Klassen, D. R. (2009) Icarus, 204, 32.

  11. Light, shadows and surface characteristics: the multispectral Portable Light Dome

    Science.gov (United States)

    Watteeuw, Lieve; Hameeuw, Hendrik; Vandermeulen, Bruno; Van der Perre, Athena; Boschloos, Vanessa; Delvaux, Luc; Proesmans, Marc; Van Bos, Marina; Van Gool, Luc

    2016-11-01

    A multispectral, multidirectional, portable and dome-shaped acquisition system is developed within the framework of the research projects RICH (KU Leuven) and EES (RMAH, Brussels) in collaboration with the ESAT-VISICS research group (KU Leuven). The multispectral Portable Light Dome (MS PLD) consists of a hemispherical structure, an overhead camera and LEDs emitting in five parts of the electromagnetic spectrum regularly covering the dome's inside surface. With the associated software solution, virtual relighting and enhancements can be applied in a real-time, interactive manner. The system extracts genuine 3D and shading information based on a photometric stereo algorithm. This innovative approach allows for instantaneous alternations between the computations in the infrared, red, green, blue and ultraviolet spectra. The MS PLD system has been tested for research ranging from medieval manuscript illuminations to ancient Egyptian artefacts. Preliminary results have shown that it documents and measures the 3D surface structure of objects, re-visualises underdrawings, faded pigments and inscriptions, and examines the MS results in combination with the actual relief characteristics of the physical object. Newly developed features are reflection maps and histograms, analytic visualisations of the reflection properties of all separate LEDs or selected areas. In its capacity as imaging technology, the system acts as a tool for the analysis of surface materials (e.g. identification of blue pigments, gold and metallic surfaces). Besides offering support in answering questions of attribution and monitoring changes and decay of materials, the PLD also contributes to the identification of materials, all essential factors when making decisions in the conservation protocol.

  12. Field-effect sensors - from pH sensing to biosensing: sensitivity enhancement using streptavidin-biotin as a model system.

    Science.gov (United States)

    Lowe, Benjamin M; Sun, Kai; Zeimpekis, Ioannis; Skylaris, Chris-Kriton; Green, Nicolas G

    2017-11-06

    Field-Effect Transistor sensors (FET-sensors) have been receiving increasing attention for biomolecular sensing over the last two decades due to their potential for ultra-high sensitivity sensing, label-free operation, cost reduction and miniaturisation. Whilst the commercial application of FET-sensors in pH sensing has been realised, their commercial application in biomolecular sensing (termed BioFETs) is hindered by poor understanding of how to optimise device design for highly reproducible operation and high sensitivity. In part, these problems stem from the highly interdisciplinary nature of the problems encountered in this field, in which knowledge of biomolecular-binding kinetics, surface chemistry, electrical double layer physics and electrical engineering is required. In this work, a quantitative analysis and critical review has been performed comparing literature FET-sensor data for pH-sensing with data for sensing of biomolecular streptavidin binding to surface-bound biotin systems. The aim is to provide the first systematic, quantitative comparison of BioFET results for a single biomolecular analyte, specifically streptavidin, which is the most commonly used model protein in biosensing experiments, and often used as an initial proof-of-concept for new biosensor designs. This novel quantitative and comparative analysis of the surface potential behaviour of a range of devices demonstrated a strong contrast between the trends observed in pH-sensing and those in biomolecule-sensing. Potential explanations are discussed in detail and surface-chemistry optimisation is shown to be a vital component in sensitivity-enhancement. Factors which can influence the response, yet which have not always been fully appreciated, are explored and practical suggestions are provided on how to improve experimental design.

  13. Color and textural quality of packaged wild rocket measured by multispectral imaging

    DEFF Research Database (Denmark)

    Løkke, Mette Marie; Seefeldt, Helene Fast; Skov, Thomas

    2013-01-01

    Green color and texture are important attributes for the perception of freshness of wild rocket. Packaging of green leafy vegetables can postpone senescence and yellowing, but a drawback is the risk of anaerobic respiration leading to loss of tissue integrity and development of an olive-brown color....... The hypothesis underlying this paper is that color and textural quality of packaged wild rocket leaves can be predicted by multispectral imaging for faster evaluation of visual quality of leafy green vegetables in scientific experiments. Multispectral imaging was correlated to sensory evaluation of packaged wild...... rocket quality. CIELAB values derived from the multispectral images and from a spectrophotometer changed during storage, but the data were insufficient to describe variation in sensory perceived color and texture. CIELAB values from the multispectral images allowed for a more detailed determination...

  14. Diagnosing hypoxia in murine models of rheumatoid arthritis from reflectance multispectral images

    Science.gov (United States)

    Glinton, Sophie; Naylor, Amy J.; Claridge, Ela

    2017-07-01

    Spectra computed from multispectral images of murine models of Rheumatoid Arthritis show a characteristic decrease in reflectance within the 600-800nm region which is indicative of the reduction in blood oxygenation and is consistent with hypoxia.

  15. Concentric circular ring and nanodisk optical antenna enhanced multispectral quantum dot infrared photodetector with spectral localization

    International Nuclear Information System (INIS)

    Zhang, Yingjie; Kemsri, Thitikorn; Li, Lin; Lu, Xuejun; Gu, Guiru

    2017-01-01

    In this paper, we report a concentric circular ring and nanodisk plasmonic optical antenna (POA) enhanced multispectral quantum dot infrared photodetector (QDIP). The circular ring and the nanodisk POA structures are designed to have plasmonic resonant wavelengths in the longwave infrared (LWIR) and the midwave infrared (MWIR) spectral regimes, respectively. The electric field ( E -field) distributions are simulated and show spectral localization due to the distinct plasmonic resonant wavelengths of the POA structures. The circular ring is found to enhance the E -fields in the nanodisk regions due to the mutual coupling. A concentric circular ring and nanodisk POA enhanced multispectral QDIP was fabricated and tested. Multispectral enhancement was observed. The enhancement is compared to that of a QDIP with only the circular ring POA structure. The experiment data agree with the simulation. The concentric circular ring and nanodisk POA provides a compact planar structure for multispectral QDIP enhancement. (paper)

  16. A multispectral scanner survey of the Idaho National Engineering Laboratory and the Hanford Reservation

    International Nuclear Information System (INIS)

    Brewster, S.B. Jr.; Howard, M.E.; Shines, J.E.

    1994-09-01

    An airborne multispectral scanner survey of selected sites on the Idaho National Engineering Laboratory and the Hanford Reservation was performed in mid-November 1993. Aerial multispectral scanner and photography data were acquired coincidentally with the Big O experiment at both locations. To illustrate two potential applications, the multispectral scanner data were digitally enhanced to facilitate the detection of soil disturbance and evidence of surface water transport. The main conclusion of this study was that multispectral data acquired under these conditions can be useful for soil disturbance detection. The imagery did not prove as useful, however, for direct indications of surface water transport. It was possible to infer some water transport patterns from dry water beds, but only if surface indications were present

  17. Development of a Mobile Multispectral Imaging Platform for Precise Field Phenotyping

    Czech Academy of Sciences Publication Activity Database

    Svensgaard, J.; Roitsch, Thomas; Christensen, C.

    2014-01-01

    Roč. 4, č. 3 (2014), s. 322-336 ISSN 2073-4395 Institutional support: RVO:67179843 Keywords : field phenotyping * multispectral imaging * supervised classification * canonical discriminant analysis * vegetation coverage * NDVI Subject RIV: EH - Ecology, Behaviour

  18. Indium tin oxide with zwitterionic interfacial design for biosensing applications in complex matrices

    Energy Technology Data Exchange (ETDEWEB)

    Darwish, Nadia T.; Alias, Yatimah; Khor, Sook Mei, E-mail: naomikhor@um.edu.my

    2015-01-15

    Graphical abstract: - Highlights: • The incorporation of a linker and antifouling molecules is an important interfacial design for both affinity and enzymatic biosensors. • The resistance to non-specific protein adsorptions of BSA–FITC and RBITC–Cyt c were determined by confocal laser scanning microscopy. • The antifouling interface allows detection of target analytes in highly complicated biological matrices. - Abstract: Biosensing interfaces consisting of linker molecules (COOH or NH{sub 2}) and charged, antifouling moieties ((-SO{sup 3−} and N{sup +}(Me){sub 3}) for biosensing applications were prepared for the first time by the in situ deposition of mixtures of aryl diazonium cations on indium tin oxide (ITO) electrodes. A linker molecule is required for the attachment of biorecognition molecules (e.g., antibodies, enzymes, DNA chains, and aptamers) close to the transducer surface. The attached molecules improve the biosensing sensitivity and also provide a short response time for analyte detection. Thus, the incorporation of a linker and antifouling molecules is an important interfacial design for both affinity and enzymatic biosensors. The reductive adsorption behavior and electrochemical measurement were studied for (1) an individual compound and (2) a mixture of antifouling zwitterionic molecules together with linker molecules [combination 1: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 1,4-phenylenediamine (PPD); combination 2: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 4-aminobenzoic acid (PABA)] of aryl diazonium cations grafted onto an ITO electrode. The mixture ratios of SP:TMAP:PPD and SP:TMAP:PABA that provided the greatest resistance to non-specific protein adsorptions of bovine serum albumin labeled with fluorescein isothiocyanate (BSA–FITC) and cytochrome c labeled with rhodamine B isothiocyanate (RBITC–Cyt c) were determined by confocal laser scanning microscopy (CLSM). For the surface antifouling study

  19. Indium tin oxide with zwitterionic interfacial design for biosensing applications in complex matrices

    International Nuclear Information System (INIS)

    Darwish, Nadia T.; Alias, Yatimah; Khor, Sook Mei

    2015-01-01

    Graphical abstract: - Highlights: • The incorporation of a linker and antifouling molecules is an important interfacial design for both affinity and enzymatic biosensors. • The resistance to non-specific protein adsorptions of BSA–FITC and RBITC–Cyt c were determined by confocal laser scanning microscopy. • The antifouling interface allows detection of target analytes in highly complicated biological matrices. - Abstract: Biosensing interfaces consisting of linker molecules (COOH or NH 2 ) and charged, antifouling moieties ((-SO 3− and N + (Me) 3 ) for biosensing applications were prepared for the first time by the in situ deposition of mixtures of aryl diazonium cations on indium tin oxide (ITO) electrodes. A linker molecule is required for the attachment of biorecognition molecules (e.g., antibodies, enzymes, DNA chains, and aptamers) close to the transducer surface. The attached molecules improve the biosensing sensitivity and also provide a short response time for analyte detection. Thus, the incorporation of a linker and antifouling molecules is an important interfacial design for both affinity and enzymatic biosensors. The reductive adsorption behavior and electrochemical measurement were studied for (1) an individual compound and (2) a mixture of antifouling zwitterionic molecules together with linker molecules [combination 1: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 1,4-phenylenediamine (PPD); combination 2: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 4-aminobenzoic acid (PABA)] of aryl diazonium cations grafted onto an ITO electrode. The mixture ratios of SP:TMAP:PPD and SP:TMAP:PABA that provided the greatest resistance to non-specific protein adsorptions of bovine serum albumin labeled with fluorescein isothiocyanate (BSA–FITC) and cytochrome c labeled with rhodamine B isothiocyanate (RBITC–Cyt c) were determined by confocal laser scanning microscopy (CLSM). For the surface antifouling study, we used 2

  20. Indium tin oxide with zwitterionic interfacial design for biosensing applications in complex matrices

    Science.gov (United States)

    Darwish, Nadia T.; Alias, Yatimah; Khor, Sook Mei

    2015-01-01

    Biosensing interfaces consisting of linker molecules (COOH or NH2) and charged, antifouling moieties ((sbnd SO3- and N+(Me)3) for biosensing applications were prepared for the first time by the in situ deposition of mixtures of aryl diazonium cations on indium tin oxide (ITO) electrodes. A linker molecule is required for the attachment of biorecognition molecules (e.g., antibodies, enzymes, DNA chains, and aptamers) close to the transducer surface. The attached molecules improve the biosensing sensitivity and also provide a short response time for analyte detection. Thus, the incorporation of a linker and antifouling molecules is an important interfacial design for both affinity and enzymatic biosensors. The reductive adsorption behavior and electrochemical measurement were studied for (1) an individual compound and (2) a mixture of antifouling zwitterionic molecules together with linker molecules [combination 1: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 1,4-phenylenediamine (PPD); combination 2: 4-sulfophenyl (SP), 4-trimethylammoniophenyl (TMAP), and 4-aminobenzoic acid (PABA)] of aryl diazonium cations grafted onto an ITO electrode. The mixture ratios of SP:TMAP:PPD and SP:TMAP:PABA that provided the greatest resistance to non-specific protein adsorptions of bovine serum albumin labeled with fluorescein isothiocyanate (BSA-FITC) and cytochrome c labeled with rhodamine B isothiocyanate (RBITC-Cyt c) were determined by confocal laser scanning microscopy (CLSM). For the surface antifouling study, we used 2-[2-(2-methoxyethoxy) ethoxy]acetic acid (OEG) as a standard control because of its prominent antifouling properties. Surface compositions of combinations 1 and 2 were characterized using X-ray photoelectron spectroscopy (XPS). Field-emission scanning electron microscopy (FE-SEM) was used to characterize the morphology of the grafted films to confirm the even distribution between linker and antifouling molecules grafted onto the ITO surfaces

  1. Detecting early stage pressure ulcer on dark skin using multispectral imager

    Science.gov (United States)

    Yi, Dingrong; Kong, Linghua; Sprigle, Stephen; Wang, Fengtao; Wang, Chao; Liu, Fuhan; Adibi, Ali; Tummala, Rao

    2010-02-01

    We are developing a handheld multispectral imaging device to non-invasively inspect stage I pressure ulcers in dark pigmented skins without the need of touching the patient's skin. This paper reports some preliminary test results of using a proof-of-concept prototype. It also talks about the innovation's impact to traditional multispectral imaging technologies and the fields that will potentially benefit from it.

  2. AgNPs-3D nanostructure enhanced electrochemiluminescence of CdSe quantum dot coupled with strand displacement amplification for sensitive biosensing of DNA

    International Nuclear Information System (INIS)

    Jiao, Meng; Jie, Guifen; Tan, Lu; Niu, Shuyan

    2017-01-01

    A novel strategy using Ag nanoparticles-3D (AgNPs-3D) nanostructure enhanced electrochemiluminescence (ECL) of CdSe quantum dots (QDs) coupled with strand displacement amplification (SDA) for sensitive biosensing of DNA was successfully designed. The prepared CdSe QDs with intense ECL were assembled on the poly (diallyldimethylammonium chloride) (PDDA) graphene oxide (GO) nanocomposites modified electrode, then gold nanoparticles (NPs) as the quenching probe was conjugated to the QDs, ECL signal was efficiently quenched. The target DNA induced cycling SDA and generated a large number of DNA s1. The released DNA s1 could open the hairpin DNA with quenching probe. So the presence of low levels of target DNA can potentially result in a significant enhancement of ECL signal. Furthermore, large number of AgNPs were then in situ reduced in the 3D DNA skeleton on the electrode, which dramaticlly enhanced ECL signal of QDs owing to the excellent electrical conductivity, and the much amplified ECL signal change has a quantitative relation with the target DNA. So by combining the AgNPs-3D nanostructure and cycling SDA to achieve greatly amplified detection of DNA, the promising ECL strategy could provide a highly sensitive platform for various biomolecules and has a good prospect for clinical diagnosis in the future. - Graphical abstract: A novel strategy using AgNPs-3D nanostructure enhanced electrochemiluminescence of CdSe quantum dot coupled with DNA strand displacement amplification for sensitive biosensing of DNA was successfully designed, the proposed biosensor can be expected to be an emerging alternative for straightforward nucleic acid detection in complex samples with an easy and rapid way. - Highlights: • AgNPs-3D nanostructure for enhancing ECL signal of CdSe QDs was successfully designed. • A new dual amplification strategy for detection of DNA by using AgNPs-3D nanostructure coupled with SDA was developed. • It is for the first time AgNPs-3D nanostructure

  3. Utility of multispectral imaging for nuclear classification of routine clinical histopathology imagery

    Directory of Open Access Journals (Sweden)

    Harvey Neal R

    2007-07-01

    Full Text Available Abstract Background We present an analysis of the utility of multispectral versus standard RGB imagery for routine H&E stained histopathology images, in particular for pixel-level classification of nuclei. Our multispectral imagery has 29 spectral bands, spaced 10 nm within the visual range of 420–700 nm. It has been hypothesized that the additional spectral bands contain further information useful for classification as compared to the 3 standard bands of RGB imagery. We present analyses of our data designed to test this hypothesis. Results For classification using all available image bands, we find the best performance (equal tradeoff between detection rate and false alarm rate is obtained from either the multispectral or our "ccd" RGB imagery, with an overall increase in performance of 0.79% compared to the next best performing image type. For classification using single image bands, the single best multispectral band (in the red portion of the spectrum gave a performance increase of 0.57%, compared to performance of the single best RGB band (red. Additionally, red bands had the highest coefficients/preference in our classifiers. Principal components analysis of the multispectral imagery indicates only two significant image bands, which is not surprising given the presence of two stains. Conclusion Our results indicate that multispectral imagery for routine H&E stained histopathology provides minimal additional spectral information for a pixel-level nuclear classification task than would standard RGB imagery.

  4. In Situ Synthesis of Reduced Graphene Oxide and Gold Nanocomposites for Nanoelectronics and Biosensing

    Directory of Open Access Journals (Sweden)

    Chen Peng

    2011-01-01

    Full Text Available Abstract In this study, an in situ chemical synthesis approach has been developed to prepare graphene–Au nanocomposites from chemically reduced graphene oxide (rGO in aqueous media. UV–Vis absorption, atomic force microscopy, scanning electron microscopy, transmission electron microscopy, and Raman spectroscopy were used to demonstrate the successful attachment of Au nanoparticles to graphene sheets. Configured as field-effect transistors (FETs, the as-synthesized single-layered rGO-Au nanocomposites exhibit higher hole mobility and conductance when compared to the rGO sheets, promising its applications in nanoelectronics. Furthermore, we demonstrate that the rGO-Au FETs are able to label-freely detect DNA hybridization with high sensitivity, indicating its potentials in nanoelectronic biosensing.

  5. Biosensing with Förster Resonance Energy Transfer Coupling between Fluorophores and Nanocarbon Allotropes

    Directory of Open Access Journals (Sweden)

    Shaowei Ding

    2015-06-01

    Full Text Available Nanocarbon allotropes (NCAs, including zero-dimensional carbon dots (CDs, one-dimensional carbon nanotubes (CNTs and two-dimensional graphene, exhibit exceptional material properties, such as unique electrical/thermal conductivity, biocompatibility and high quenching efficiency, that make them well suited for both electrical/electrochemical and optical sensors/biosensors alike. In particular, these material properties have been exploited to significantly enhance the transduction of biorecognition events in fluorescence-based biosensing involving Förster resonant energy transfer (FRET. This review analyzes current advances in sensors and biosensors that utilize graphene, CNTs or CDs as the platform in optical sensors and biosensors. Widely utilized synthesis/fabrication techniques, intrinsic material properties and current research examples of such nanocarbon, FRET-based sensors/biosensors are illustrated. The future outlook and challenges for the research field are also detailed.

  6. A review of biosensing techniques for detection of trace carcinogen contamination in food products.

    Science.gov (United States)

    Li, Zhanming; Yu, Yue; Li, Zhiliang; Wu, Tao

    2015-04-01

    Carcinogen contaminations in the food chain, for example heavy metal ions, pesticides, acrylamide, and mycotoxins, have caused serious health problems. A major objective of food-safety research is the identification and prevention of exposure to these carcinogens, because of their impossible-to-reverse tumorigenic effects. However, carcinogen detection is difficult because of their trace-level presence in food. Thus, reliable and accurate separation and determination methods are essential to protect food safety and human health. This paper summarizes the state of the art in separation and determination methods for analyzing carcinogen contamination, especially the advances in biosensing methods. Furthermore, the application of promising technology including nanomaterials, imprinted polymers, and microdevices is detailed. Challenges and perspectives are also discussed.

  7. Third generation biosensing matrix based on Fe-implanted ZnO thin film

    International Nuclear Information System (INIS)

    Saha, Shibu; Gupta, Vinay; Sreenivas, K.; Tan, H. H.; Jagadish, C.

    2010-01-01

    Third generation biosensor based on Fe-implanted ZnO (Fe-ZnO) thin film has been demonstrated. Implantation of Fe in rf-sputtered ZnO thin film introduces redox center along with shallow donor level and thereby enhance its electron transfer property. Glucose oxidase (GOx), chosen as model enzyme, has been immobilized on the surface of the matrix. Cyclic voltammetry and photometric assay show that the prepared bioelectrode, GOx/Fe-ZnO/ITO/Glass is sensitive to the glucose concentration with enhanced response of 0.326 μA mM -1 cm -2 and low Km of 2.76 mM. The results show promising application of Fe-implanted ZnO thin film as an attractive matrix for third generation biosensing.

  8. Nitrite Biosensing via Selective Enzymes—A Long but Promising Route

    Directory of Open Access Journals (Sweden)

    M. Gabriela Almeida

    2010-12-01

    Full Text Available The last decades have witnessed a steady increase of the social and political awareness for the need of monitoring and controlling environmental and industrial processes. In the case of nitrite ion, due to its potential toxicity for human health, the European Union has recently implemented a number of rules to restrict its level in drinking waters and food products. Although several analytical protocols have been proposed for nitrite quantification, none of them enable a reliable and quick analysis of complex samples. An alternative approach relies on the construction of biosensing devices using stable enzymes, with both high activity and specificity for nitrite. In this paper we review the current state-of-the-art in the field of electrochemical and optical biosensors using nitrite reducing enzymes as biorecognition elements and discuss the opportunities and challenges in this emerging market.

  9. Development of a surface plasmon resonance and nanomechanical biosensing hybrid platform for multiparametric reading.

    Science.gov (United States)

    Alvarez, Mar; Fariña, David; Escuela, Alfonso M; Sendra, Jose Ramón; Lechuga, Laura M

    2013-01-01

    We have developed a hybrid platform that combines two well-known biosensing technologies based on quite different transducer principles: surface plasmon resonance and nanomechanical sensing. The new system allows the simultaneous and real-time detection of two independent parameters, refractive index change (Δn), and surface stress change (Δσ) when a biomolecular interaction takes place. Both parameters have a direct relation with the mass coverage of the sensor surface. The core of the platform is a common fluid cell, where the solution arrives to both sensor areas at the same time and under the same conditions (temperature, velocity, diffusion, etc.).The main objective of this integration is to achieve a better understanding of the physical behaviour of the transducers during sensing, increasing the information obtained in real time in one single experiment. The potential of the hybrid platform is demonstrated by the detection of DNA hybridization.

  10. Third generation biosensing matrix based on Fe-implanted ZnO thin film

    Science.gov (United States)

    Saha, Shibu; Gupta, Vinay; Sreenivas, K.; Tan, H. H.; Jagadish, C.

    2010-09-01

    Third generation biosensor based on Fe-implanted ZnO (Fe-ZnO) thin film has been demonstrated. Implantation of Fe in rf-sputtered ZnO thin film introduces redox center along with shallow donor level and thereby enhance its electron transfer property. Glucose oxidase (GOx), chosen as model enzyme, has been immobilized on the surface of the matrix. Cyclic voltammetry and photometric assay show that the prepared bioelectrode, GOx/Fe-ZnO/ITO/Glass is sensitive to the glucose concentration with enhanced response of 0.326 μA mM-1 cm-2 and low Km of 2.76 mM. The results show promising application of Fe-implanted ZnO thin film as an attractive matrix for third generation biosensing.

  11. Surface-functionalized nanoparticles for biosensing and imaging-guided therapeutics

    Science.gov (United States)

    Jiang, Shan; Win, Khin Yin; Liu, Shuhua; Teng, Choon Peng; Zheng, Yuangang; Han, Ming-Yong

    2013-03-01

    In this article, the very recent progress of various functional inorganic nanomaterials is reviewed including their unique properties, surface functionalization strategies, and applications in biosensing and imaging-guided therapeutics. The proper surface functionalization renders them with stability, biocompatibility and functionality in physiological environments, and further enables their targeted use in bioapplications after bioconjugation via selective and specific recognition. The surface-functionalized nanoprobes using the most actively studied nanoparticles (i.e., gold nanoparticles, quantum dots, upconversion nanoparticles, and magnetic nanoparticles) make them an excellent platform for a wide range of bioapplications. With more efforts in recent years, they have been widely developed as labeling probes to detect various biological species such as proteins, nucleic acids and ions, and extensively employed as imaging probes to guide therapeutics such as drug/gene delivery and photothermal/photodynamic therapy.

  12. Porous silicon platform for optical detection of functionalized magnetic particles biosensing.

    Science.gov (United States)

    Ko, Pil Ju; Ishikawa, Ryousuke; Sohn, Honglae; Sandhu, Adarsh

    2013-04-01

    The physical properties of porous materials are being exploited for a wide range of applications including optical biosensors, waveguides, gas sensors, micro capacitors, and solar cells. Here, we review the fast, easy and inexpensive electrochemical anodization based fabrication porous silicon (PSi) for optical biosensing using functionalized magnetic particles. Combining magnetically labeled biomolecules with PSi offers a rapid and one-step immunoassay and real-time detection by magnetic manipulation of superparamagnetic beads (SPBs) functionalized with target molecules onto corresponding probe molecules immobilized inside nano-pores of PSi. We first give an introduction to electrochemical and chemical etching procedures used to fabricate a wide range of PSi structures. Next, we describe the basic properties of PSi and underlying optical scattering mechanisms that govern their unique optical properties. Finally, we give examples of our experiments that demonstrate the potential of combining PSi and magnetic beads for real-time point of care diagnostics.

  13. Robust label-free biosensing using microdisk laser arrays with on-chip references.

    Science.gov (United States)

    Wondimu, S F; Hippler, M; Hussal, C; Hofmann, A; Krämmer, S; Lahann, J; Kalt, H; Freude, W; Koos, C

    2018-02-05

    Whispering-gallery mode (WGM) microdisk lasers show great potential for highly sensitive label-free detection in large-scale sensor arrays. However, when used in practical applications under normal ambient conditions, these devices suffer from temperature fluctuations and photobleaching. Here we demonstrate that these challenges can be overcome by a novel referencing scheme that allows for simultaneous compensation of temperature drift and photobleaching. The technique relies on reference structures protected by locally dispensed passivation materials, and can be scaled to extended arrays of hundreds of devices. We prove the viability of the concept in a series of experiments, demonstrating robust and sensitive label-free detection over a wide range of constant or continuously varying temperatures. To the best of our knowledge, these measurements represent the first demonstration of biosensing in active WGM devices with simultaneous compensation of both photobleaching and temperature drift.

  14. Pulsed Biosensing

    Czech Academy of Sciences Publication Activity Database

    Fink, Dietmar; Hernandez, G. M.; Vacík, Jiří; Alfonta, L.

    2011-01-01

    Roč. 11, č. 4 (2011), s. 1084-1087 ISSN 1530-437X R&D Projects: GA ČR GAP107/11/1856 Institutional research plan: CEZ:AV0Z10480505 Keywords : Irradiated polymers Subject RIV: JJ - Other Materials Impact factor: 1.520, year: 2011

  15. Biosensing of matrix metalloproteinase activity with Cd-free quantum dots

    Science.gov (United States)

    Plumley, John Bryan

    Quantum dots (QDs) have become attractive in the biomedical field on account of their superior optical properties and stability, in comparison to traditional fluorophores. QDs also have properties which make them ideal for complex in vivo conditions. However, toxicity has been a chief concern in the eventual implementation of QDs for in vivo applications such as biosensing and tumor imaging. Commercially available QDs contain a notoriously noxious Cd component and therefore continuous research has gone into developing QDs without toxic heavy metals, generally Cd, that would still yield comparable performance in terms of their optical properties. Nonetheless, even in the case of Cd-free QDs, toxicity should be evaluated on a case by case basis, as other properties such as size, coating, stability, and charge can affect toxicity of nanomaterials as well, making it a very complex issue. With the high promise of QDs in the field of biomedical development as a motivation, this work strives to develop the efficient and repeatable synthesis of Cd-free QDs with high stability and luminescence, with proven low toxicity, and the ability to detect active matrix metalloproteinase (MMP) in a biosensing system, designed to identify direct biomarkers for pathological conditions, which in turn would enable early disease diagnosis and better treatment development. In this work, highly luminescent ZnSe:Mn/ZnS QDs have been synthesized, characterized, and modified with peptides with a bioconjugation procedure that utilized thiol-metal affinity. Experiments aiming at MMP detection were conducted using the peptide/QD conjugates. In addition, the ApoTox-Glo(TM) Triplex assay was utilized to evaluate cytotoxicity, and a safe concentration below 0.125 microM was identified for peptide-coated ZnSe:Mn/ZnS QDs in water. Finally, in contribution to developing an in vivo fiberoptic system for sensing MMP activity, the QDs were successfully tethered to silica and MMP detection was demonstrated

  16. Platinum nanoparticles functionalized nitrogen doped graphene platform for sensitive electrochemical glucose biosensing

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Zhanjun, E-mail: zjyang@yzu.edu.cn; Cao, Yue; Li, Juan; Jian, Zhiqin; Zhang, Yongcai; Hu, Xiaoya

    2015-04-29

    Highlights: • An efficient PtNPs@NG nanocomposite was prepared for the immobilization of enzyme. • A novel electrochemical glucose biosensor was constructed based on this PtNPs@NG. • The proposed glucose biosensor showed high sensitivity and low detection limit. • The PtNPs@NG composite provided a promising platform for biosensing applications. - Abstract: In this work, we reported an efficient platinum nanoparticles functionalized nitrogen doped graphene (PtNPs@NG) nanocomposite for devising novel electrochemical glucose biosensor for the first time. The fabricated PtNPs@NG and biosensor were characterized using transmission electron microscopy, high-resolution transmission electron microscopy, X-ray photoelectron spectroscopy, static water contact angle, UV–vis spectroscopy, electrochemical impedance spectra and cyclic voltammetry, respectively. PtNPs@NG showed large surface area and excellent biocompatibility, and enhanced the direct electron transfer between enzyme molecules and electrode surface. The glucose oxidase (GOx) immobilized on PtNPs@NG nanocomposite retained its bioactivity, and exhibited a surface controlled, quasi-reversible and fast electron transfer process. The constructed glucose biosensor showed wide linear range from 0.005 to 1.1 mM with high sensitivity of 20.31 mA M{sup −1} cm{sup −2}. The detection limit was calculated to be 0.002 mM at signal-to-noise of 3, which showed 20-fold decrease in comparison with single NG-based electrochemical biosensor for glucose. The proposed glucose biosensor also demonstrated excellent selectivity, good reproducibility, acceptable stability, and could be successfully applied in the detection of glucose in serum samples at the applied potential of −0.33 V. This research provided a promising biosensing platform for the development of excellent electrochemical biosensors.

  17. Platinum nanoparticles functionalized nitrogen doped graphene platform for sensitive electrochemical glucose biosensing

    International Nuclear Information System (INIS)

    Yang, Zhanjun; Cao, Yue; Li, Juan; Jian, Zhiqin; Zhang, Yongcai; Hu, Xiaoya

    2015-01-01

    Highlights: • An efficient PtNPs@NG nanocomposite was prepared for the immobilization of enzyme. • A novel electrochemical glucose biosensor was constructed based on this PtNPs@NG. • The proposed glucose biosensor showed high sensitivity and low detection limit. • The PtNPs@NG composite provided a promising platform for biosensing applications. - Abstract: In this work, we reported an efficient platinum nanoparticles functionalized nitrogen doped graphene (PtNPs@NG) nanocomposite for devising novel electrochemical glucose biosensor for the first time. The fabricated PtNPs@NG and biosensor were characterized using transmission electron microscopy, high-resolution transmission electron microscopy, X-ray photoelectron spectroscopy, static water contact angle, UV–vis spectroscopy, electrochemical impedance spectra and cyclic voltammetry, respectively. PtNPs@NG showed large surface area and excellent biocompatibility, and enhanced the direct electron transfer between enzyme molecules and electrode surface. The glucose oxidase (GOx) immobilized on PtNPs@NG nanocomposite retained its bioactivity, and exhibited a surface controlled, quasi-reversible and fast electron transfer process. The constructed glucose biosensor showed wide linear range from 0.005 to 1.1 mM with high sensitivity of 20.31 mA M −1 cm −2 . The detection limit was calculated to be 0.002 mM at signal-to-noise of 3, which showed 20-fold decrease in comparison with single NG-based electrochemical biosensor for glucose. The proposed glucose biosensor also demonstrated excellent selectivity, good reproducibility, acceptable stability, and could be successfully applied in the detection of glucose in serum samples at the applied potential of −0.33 V. This research provided a promising biosensing platform for the development of excellent electrochemical biosensors

  18. Interconnecting wearable devices with nano-biosensing implants through optical wireless communications

    Science.gov (United States)

    Johari, Pedram; Pandey, Honey; Jornet, Josep M.

    2018-02-01

    Major advancements in the fields of electronics, photonics and wireless communication have enabled the development of compact wearable devices, with applications in diverse domains such as fitness, wellness and medicine. In parallel, nanotechnology is enabling the development of miniature sensors that can detect events at the nanoscale with unprecedented accuracy. On this matter, in vivo implantable Surface Plasmon Resonance (SPR) nanosensors have been proposed to analyze circulating biomarkers in body fluids for the early diagnosis of a myriad of diseases, ranging from cardiovascular disorders to different types of cancer. In light of these results, in this paper, an architecture is proposed to bridge the gap between these two apparently disjoint paradigms, namely, the commercial wearable devices and the advanced nano-biosensing technologies. More specifically, this paper thoroughly assesses the feasibility of the wireless optical intercommunications of an SPR-based nanoplasmonic biochip -implanted subcutaneously in the wrist-, with a nanophotonic wearable smart band which is integrated by an array of nano-lasers and photon-detectors for distributed excitation and measurement of the nanoplasmonic biochip. This is done through a link budget analysis which captures the peculiarities of the intra-body optical channel at (sub) cellular level, the strength of the SPR nanosensor reflection, as well as the capabilities of the nanolasers (emission power, spectrum) and the nano photon-detectors (sensitivity and noise equivalent power). The proposed analysis guides the development of practical communication designs between the wearable devices and nano-biosensing implants, which paves the way through early-stage diagnosis of severe diseases.

  19. Nanomaterials-based enzyme electrochemical biosensors operating through inhibition for biosensing applications.

    Science.gov (United States)

    Kurbanoglu, Sevinc; Ozkan, Sibel A; Merkoçi, Arben

    2017-03-15

    In recent years great progress has been made in applying nanomaterials to design novel biosensors. Use of nanomaterials offers to biosensing platforms exceptional optical, electronic and magnetic properties. Nanomaterials can increase the surface of the transducing area of the sensors that in turn bring an increase in catalytic behaviors. They have large surface-to-volume ratio, controlled morphology and structure that also favor miniaturization, an interesting advantage when the sample volume is a critical issue. Biosensors have great potential for achieving detect-to-protect devices: devices that can be used in detections of pollutants and other treating compounds/analytes (drugs) protecting citizens' life. After a long term focused scientific and financial efforts/supports biosensors are expected now to fulfill their promise such as being able to perform sampling and analysis of complex samples with interest for clinical or environment fields. Among all types of biosensors, enzymatic biosensors, the most explored biosensing devices, have an interesting property, the inherent inhibition phenomena given the enzyme-substrate complex formation. The exploration of such phenomena is making remarkably important their application as research and applied tools in diagnostics. Different inhibition biosensor systems based on nanomaterials modification has been proposed and applied. The role of nanomaterials in inhibition-based biosensors for the analyses of different groups of drugs as well as contaminants such as pesticides, phenolic compounds and others, are discussed in this review. This deep analysis of inhibition-based biosensors that employ nanomaterials will serve researchers as a guideline for further improvements and approaching of these devices to real sample applications so as to reach society needs and such biosensor market demands. Copyright © 2016 Elsevier B.V. All rights reserved.

  20. Application of 2D Non-Graphene Materials and 2D Oxide Nanostructures for Biosensing Technology

    Directory of Open Access Journals (Sweden)

    Kateryna Shavanova

    2016-02-01

    Full Text Available The discovery of graphene and its unique properties has inspired researchers to try to invent other two-dimensional (2D materials. After considerable research effort, a distinct “beyond graphene” domain has been established, comprising the library of non-graphene 2D materials. It is significant that some 2D non-graphene materials possess solid advantages over their predecessor, such as having a direct band gap, and therefore are highly promising for a number of applications. These applications are not limited to nano- and opto-electronics, but have a strong potential in biosensing technologies, as one example. However, since most of the 2D non-graphene materials have been newly discovered, most of the research efforts are concentrated on material synthesis and the investigation of the properties of the material. Applications of 2D non-graphene materials are still at the embryonic stage, and the integration of 2D non-graphene materials into devices is scarcely reported. However, in recent years, numerous reports have blossomed about 2D material-based biosensors, evidencing the growing potential of 2D non-graphene materials for biosensing applications. This review highlights the recent progress in research on the potential of using 2D non-graphene materials and similar oxide nanostructures for different types of biosensors (optical and electrochemical. A wide range of biological targets, such as glucose, dopamine, cortisol, DNA, IgG, bisphenol, ascorbic acid, cytochrome and estradiol, has been reported to be successfully detected by biosensors with transducers made of 2D non-graphene materials.

  1. High Throughput Multispectral Image Processing with Applications in Food Science.

    Directory of Open Access Journals (Sweden)

    Panagiotis Tsakanikas

    Full Text Available Recently, machine vision is gaining attention in food science as well as in food industry concerning food quality assessment and monitoring. Into the framework of implementation of Process Analytical Technology (PAT in the food industry, image processing can be used not only in estimation and even prediction of food quality but also in detection of adulteration. Towards these applications on food science, we present here a novel methodology for automated image analysis of several kinds of food products e.g. meat, vanilla crème and table olives, so as to increase objectivity, data reproducibility, low cost information extraction and faster quality assessment, without human intervention. Image processing's outcome will be propagated to the downstream analysis. The developed multispectral image processing method is based on unsupervised machine learning approach (Gaussian Mixture Models and a novel unsupervised scheme of spectral band selection for segmentation process optimization. Through the evaluation we prove its efficiency and robustness against the currently available semi-manual software, showing that the developed method is a high throughput approach appropriate for massive data extraction from food samples.

  2. Terahertz detectors for long wavelength multi-spectral imaging.

    Energy Technology Data Exchange (ETDEWEB)

    Lyo, Sungkwun Kenneth; Wanke, Michael Clement; Reno, John Louis; Shaner, Eric Arthur; Grine, Albert D.

    2007-10-01

    The purpose of this work was to develop a wavelength tunable detector for Terahertz spectroscopy and imaging. Our approach was to utilize plasmons in the channel of a specially designed field-effect transistor called the grating-gate detector. Grating-gate detectors exhibit narrow-linewidth, broad spectral tunability through application of a gate bias, and no angular dependence in their photoresponse. As such, if suitable sensitivity can be attained, they are viable candidates for Terahertz multi-spectral focal plane arrays. When this work began, grating-gate gate detectors, while having many promising characteristics, had a noise-equivalent power (NEP) of only 10{sup -5} W/{radical}Hz. Over the duration of this project, we have obtained a true NEP of 10{sup -8} W/{radical}Hz and a scaled NEP of 10{sup -9}W/{radical}Hz. The ultimate goal for these detectors is to reach a NEP in the 10{sup -9{yields}-10}W/{radical}Hz range; we have not yet seen a roadblock to continued improvement.

  3. Multispectral image enhancement processing for microsat-borne imager

    Science.gov (United States)

    Sun, Jianying; Tan, Zheng; Lv, Qunbo; Pei, Linlin

    2017-10-01

    With the rapid development of remote sensing imaging technology, the micro satellite, one kind of tiny spacecraft, appears during the past few years. A good many studies contribute to dwarfing satellites for imaging purpose. Generally speaking, micro satellites weigh less than 100 kilograms, even less than 50 kilograms, which are slightly larger or smaller than the common miniature refrigerators. However, the optical system design is hard to be perfect due to the satellite room and weight limitation. In most cases, the unprocessed data captured by the imager on the microsatellite cannot meet the application need. Spatial resolution is the key problem. As for remote sensing applications, the higher spatial resolution of images we gain, the wider fields we can apply them. Consequently, how to utilize super resolution (SR) and image fusion to enhance the quality of imagery deserves studying. Our team, the Key Laboratory of Computational Optical Imaging Technology, Academy Opto-Electronics, is devoted to designing high-performance microsat-borne imagers and high-efficiency image processing algorithms. This paper addresses a multispectral image enhancement framework for space-borne imagery, jointing the pan-sharpening and super resolution techniques to deal with the spatial resolution shortcoming of microsatellites. We test the remote sensing images acquired by CX6-02 satellite and give the SR performance. The experiments illustrate the proposed approach provides high-quality images.

  4. Multispectral UV Imaging for Determination of the Tablet Coating Thickness.

    Science.gov (United States)

    Novikova, Anna; Carstensen, Jens M; Zeitler, J Axel; Rades, Thomas; Leopold, Claudia S

    2017-06-01

    The applicability of off-line multispectral UV imaging in combination with multivariate data analysis was investigated to determine the coating thickness and its distribution on the tablet surface during lab-scale coating. The UV imaging results were compared with the weight gain measured for each individual tablet and the corresponding coating thickness and its distribution measured by terahertz pulsed imaging (TPI). Three different tablet formulations were investigated, 2 of which contained UV-active tablet cores. Three coating formulations were applied: Aquacoat® ECD (a mainly translucent coating) and Eudragit® NE (a turbid coating containing solid particles). It was shown that UV imaging is a fast and nondestructive method to predict individual tablet weight gain as well as coating thickness. The coating thickness distribution profiles determined by UV imaging correlated to the results of the TPI measurements. UV imaging appears to hold a significant potential as a process analytical technology tool for determination of the tablet coating thickness and its distribution resulting from its high measurement speed, high molar absorptivity, and a high scattering coefficient, in addition to relatively low costs. Copyright © 2017 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.

  5. Design Considerations, Modeling and Analysis for the Multispectral Thermal Imager

    International Nuclear Information System (INIS)

    Borel, C.C.; Clodius, W.B.; Cooke, B.J.; Smith, B.W.; Weber, P.G.

    1999-01-01

    The design of remote sensing systems is driven by the need to provide cost-effective, substantive answers to questions posed by our customers. This is especially important for space-based systems, which tend to be expensive, and which generally cannot be changed after they are launched. We report here on the approach we employed in developing the desired attributes of a satellite mission, namely the Multispectral Thermal Imager. After an initial scoping study, we applied a procedure which we call: ''End-to-end modeling and analysis (EEM).'' We began with target attributes, translated to observable signatures and then propagated the signatures through the atmosphere to the sensor location. We modeled the sensor attributes to yield a simulated data stream, which was then analyzed to retrieve information about the original target. The retrieved signature was then compared to the original to obtain a figure of merit: hence the term ''end-to-end modeling and analysis.'' We base the EEM in physics to ensure high fidelity and to permit scaling. As the actual design of the payload evolves, and as real hardware is tested, we can update the EEM to facilitate trade studies, and to judge, for example, whether components that deviate from specifications are acceptable

  6. Measuring Leaf Water Content Using Multispectral Terrestrial Laser Scanning

    Science.gov (United States)

    Junttila, S.; Vastaranta, M.; Linnakoski, R.; Sugano, J.; Kaartinen, H.; Kukko, A.; Holopainen, M.; Hyyppä, H.; Hyyppä, J.

    2017-10-01

    Climate change is increasing the amount and intensity of disturbance events, i.e. drought, pest insect outbreaks and fungal pathogens, in forests worldwide. Leaf water content (LWC) is an early indicator of tree stress that can be measured remotely using multispectral terrestrial laser scanning (MS-TLS). LWC affects leaf reflectance in the shortwave infrared spectrum which can be used to predict LWC from spatially explicit MS-TLS intensity data. Here, we investigated the relationship between LWC and MS-TLS intensity features at 690 nm, 905 nm and 1550 nm wavelengths with Norway spruce seedlings in greenhouse conditions. We found that a simple ratio of 905 nm and 1550 nm wavelengths was able to explain 84 % of the variation (R2) in LWC with a respective prediction accuracy of 0.0041 g/cm2. Our results showed that MS-TLS can be used to estimate LWC with a reasonable accuracy in environmentally stable conditions.

  7. Design and development of an airborne multispectral imaging system

    Science.gov (United States)

    Kulkarni, Rahul R.; Bachnak, Rafic; Lyle, Stacey; Steidley, Carl W.

    2002-08-01

    Advances in imaging technology and sensors have made airborne remote sensing systems viable for many applications that require reasonably good resolution at low cost. Digital cameras are making their mark on the market by providing high resolution at very high rates. This paper describes an aircraft-mounted imaging system (AMIS) that is being designed and developed at Texas A&M University-Corpus Christi (A&M-CC) with the support of a grant from NASA. The approach is to first develop and test a one-camera system that will be upgraded into a five-camera system that offers multi-spectral capabilities. AMIS will be low cost, rugged, portable and has its own battery power source. Its immediate use will be to acquire images of the Coastal area in the Gulf of Mexico for a variety of studies covering vast spectra from near ultraviolet region to near infrared region. This paper describes AMIS and its characteristics, discusses the process for selecting the major components, and presents the progress.

  8. Spatial Quality of Manually Geocoded Multispectral and Multiresolution Mosaics

    Directory of Open Access Journals (Sweden)

    Andrija Krtalić

    2008-05-01

    Full Text Available The digital airborne multisensor and multiresolution system for collection of information (images about mine suspected area was created, within European commission project Airborne Minefield Area Reduction (ARC, EC IST-2000-25300, http://www.arc.vub.ac.be to gain a better perspective in mine suspected areas (MSP in the Republic of Croatia. The system consists of a matrix camera (visible and near infrared range of electromagnetic spectrum, 0.4-1.1 µm, thermal (thermal range of electromagnetic spectrum, 8-14 µm and a hyperspectral linear scanner. Because of a specific purpose and seeking object on the scene, the flights for collecting the images took place at heights from 130 m to 900 m above the ground. The result of a small relative flight height and large MSPs was a large number of images which cover MSPs. Therefore, the need for merging images in largest parts, for a better perspective in whole MSPs and the interaction of detected object influences on the scene appeared. The mentioned system did not dispose of the module for automatic mosaicking and geocoding, so mosaicking and after that geocoding were done manually. This process made the classification of the scene (better distinguishing of objects on the scene and fusion of multispectral and multiresolution images after that possible. Classification and image fusion can be even done by manually mosaicking and geocoding. This article demonstrated this claim.

  9. High Throughput Multispectral Image Processing with Applications in Food Science.

    Science.gov (United States)

    Tsakanikas, Panagiotis; Pavlidis, Dimitris; Nychas, George-John

    2015-01-01

    Recently, machine vision is gaining attention in food science as well as in food industry concerning food quality assessment and monitoring. Into the framework of implementation of Process Analytical Technology (PAT) in the food industry, image processing can be used not only in estimation and even prediction of food quality but also in detection of adulteration. Towards these applications on food science, we present here a novel methodology for automated image analysis of several kinds of food products e.g. meat, vanilla crème and table olives, so as to increase objectivity, data reproducibility, low cost information extraction and faster quality assessment, without human intervention. Image processing's outcome will be propagated to the downstream analysis. The developed multispectral image processing method is based on unsupervised machine learning approach (Gaussian Mixture Models) and a novel unsupervised scheme of spectral band selection for segmentation process optimization. Through the evaluation we prove its efficiency and robustness against the currently available semi-manual software, showing that the developed method is a high throughput approach appropriate for massive data extraction from food samples.

  10. Assessing carotid atherosclerosis by fiber-optic multispectral photoacoustic tomography

    Science.gov (United States)

    Hui, Jie; Li, Rui; Wang, Pu; Phillips, Evan; Bruning, Rebecca; Liao, Chien-Sheng; Sturek, Michael; Goergen, Craig J.; Cheng, Ji-Xin

    2015-03-01

    Atherosclerotic plaque at the carotid bifurcation is the underlying cause of the majority of ischemic strokes. Noninvasive imaging and quantification of the compositional changes preceding gross anatomic changes within the arterial wall is essential for diagnosis of disease. Current imaging modalities such as duplex ultrasound, computed tomography, positron emission tomography are limited by the lack of compositional contrast and the detection of flow-limiting lesions. Although high-resolution magnetic resonance imaging has been developed to characterize atherosclerotic plaque composition, its accessibility for wide clinical use is limited. Here, we demonstrate a fiber-based multispectral photoacoustic tomography system for excitation of lipids and external acoustic detection of the generated ultrasound. Using sequential ultrasound imaging of ex vivo preparations we achieved ~2 cm imaging depth and chemical selectivity for assessment of human arterial plaques. A multivariate curve resolution alternating least squares analysis method was applied to resolve the major chemical components, including intravascular lipid, intramuscular fat, and blood. These results show the promise of detecting carotid plaque in vivo through esophageal fiber-optic excitation of lipids and external acoustic detection of the generated ultrasound. This imaging system has great potential for serving as a point-ofcare device for early diagnosis of carotid artery disease in the clinic.

  11. MEASURING LEAF WATER CONTENT USING MULTISPECTRAL TERRESTRIAL LASER SCANNING

    Directory of Open Access Journals (Sweden)

    S. Junttila

    2017-10-01

    Full Text Available Climate change is increasing the amount and intensity of disturbance events, i.e. drought, pest insect outbreaks and fungal pathogens, in forests worldwide. Leaf water content (LWC is an early indicator of tree stress that can be measured remotely using multispectral terrestrial laser scanning (MS-TLS. LWC affects leaf reflectance in the shortwave infrared spectrum which can be used to predict LWC from spatially explicit MS-TLS intensity data. Here, we investigated the relationship between LWC and MS-TLS intensity features at 690 nm, 905 nm and 1550 nm wavelengths with Norway spruce seedlings in greenhouse conditions. We found that a simple ratio of 905 nm and 1550 nm wavelengths was able to explain 84 % of the variation (R2 in LWC with a respective prediction accuracy of 0.0041 g/cm2. Our results showed that MS-TLS can be used to estimate LWC with a reasonable accuracy in environmentally stable conditions.

  12. Inland wetland change detection using aircraft MSS [multispectral scanner] data

    International Nuclear Information System (INIS)

    Jensen, J.R.; Ramsey, E.W.; Mackey, H.E. Jr.; Sharitz, R.R.; Christensen, E.J.

    1986-01-01

    Nontidal wetlands in a portion of the Savannah River swamp forest affected by reactor cooling water discharges were mapped using March 31, 1981 and April 29, 1985 high-resolution aircraft multispectral scanner (MSS) data. Due to the inherent distortion in the aircraft MSS data and the complex spectral characteristics of the wetland vegetation, it was necessary to implement multiple techniques in the registration and classification of the MSS imagery of the Pen Branch Delta on each date. In particular, it was necessary to use a piecewise-linear registration process over relatively small regions to perform image-to-image registration. When performing unsupervised classification, an iterative ''cluster busting'' technique was used, which simplified the cluster labeling process. These procedures allowed important wetland vegetation categories to be identified on each date. The multiple-date classification maps were then evaluated using a post-classification comparison technique yielding change classes that were of value in determining the extent of inland wetland change in this region

  13. Active multispectral imaging system for photodiagnosis and personalized phototherapies

    Energy Technology Data Exchange (ETDEWEB)

    Ugarte, M. F., E-mail: marta.ugarte@uem.es, E-mail: sbriz@fis.uc3m.es; Chávarri, L.; Padrón, V. M. [Industrial Engineering Department, Universidad Europea de Madrid, C/ Tajo, s/n 28670 Villaviciosa de Odón, Madrid (Spain); Briz, S., E-mail: marta.ugarte@uem.es, E-mail: sbriz@fis.uc3m.es [Physics Department, Universidad Carlos III de Madrid, Avda. de la Universidad, 30,28911 Leganés, Madrid (Spain); García-Cuesta, E. [Computer Science and Telecommunications Department, Universidad Europea de Madrid, C/ Tajo, s/n 28670 Villaviciosa de Odón, Madrid (Spain)

    2014-10-15

    The proposed system has been designed to identify dermatopathologies or to apply personalized phototherapy treatments. The system emits electromagnetic waves in different spectral bands in the range of visible and near infrared to irradiate the target (skin or any other object) to be spectrally characterized. Then, an imaging sensor measures the target response to the stimulus at each spectral band and, after processing, the system displays in real time two images. In one of them the value of each pixel corresponds to the more reflected wavenumber whereas in the other image the pixel value represents the energy absorbed at each band. The diagnosis capability of this system lies in its multispectral design, and the phototherapy treatments are adapted to the patient and his lesion by measuring his absorption capability. This “in situ” absorption measurement allows us to determine the more appropriate duration of the treatment according to the wavelength and recommended dose. The main advantages of this system are its low cost, it does not have moving parts or complex mechanisms, it works in real time, and it is easy to handle. For these reasons its widespread use in dermatologist consultation would facilitate the work of the dermatologist and would improve the efficiency of diagnosis and treatment. In fact the prototype has already been successfully applied to pathologies such as carcinomas, melanomas, keratosis, and nevi.

  14. Active multispectral imaging system for photodiagnosis and personalized phototherapies

    International Nuclear Information System (INIS)

    Ugarte, M. F.; Chávarri, L.; Padrón, V. M.; Briz, S.; García-Cuesta, E.

    2014-01-01

    The proposed system has been designed to identify dermatopathologies or to apply personalized phototherapy treatments. The system emits electromagnetic waves in different spectral bands in the range of visible and near infrared to irradiate the target (skin or any other object) to be spectrally characterized. Then, an imaging sensor measures the target response to the stimulus at each spectral band and, after processing, the system displays in real time two images. In one of them the value of each pixel corresponds to the more reflected wavenumber whereas in the other image the pixel value represents the energy absorbed at each band. The diagnosis capability of this system lies in its multispectral design, and the phototherapy treatments are adapted to the patient and his lesion by measuring his absorption capability. This “in situ” absorption measurement allows us to determine the more appropriate duration of the treatment according to the wavelength and recommended dose. The main advantages of this system are its low cost, it does not have moving parts or complex mechanisms, it works in real time, and it is easy to handle. For these reasons its widespread use in dermatologist consultation would facilitate the work of the dermatologist and would improve the efficiency of diagnosis and treatment. In fact the prototype has already been successfully applied to pathologies such as carcinomas, melanomas, keratosis, and nevi

  15. Assigning Main Orientation to an EOH Descriptor on Multispectral Images

    Directory of Open Access Journals (Sweden)

    Yong Li

    2015-07-01

    Full Text Available This paper proposes an approach to compute an EOH (edge-oriented histogram descriptor with main orientation. EOH has a better matching ability than SIFT (scale-invariant feature transform on multispectral images, but does not assign a main orientation to keypoints. Alternatively, it tends to assign the same main orientation to every keypoint, e.g., zero degrees. This limits EOH to matching keypoints between images of translation misalignment only. Observing this limitation, we propose assigning to keypoints the main orientation that is computed with PIIFD (partial intensity invariant feature descriptor. In the proposed method, SIFT keypoints are detected from images as the extrema of difference of Gaussians, and every keypoint is assigned to the main orientation computed with PIIFD. Then, EOH is computed for every keypoint with respect to its main orientation. In addition, an implementation variant is proposed for fast computation of the EOH descriptor. Experimental results show that the proposed approach performs more robustly than the original EOH on image pairs that have a rotation misalignment.

  16. Evaluating Multispectral Snowpack Reflectivity With Changing Snow Correlation Lengths

    Science.gov (United States)

    Kang, Do Hyuk; Barros, Ana P.; Kim, Edward J.

    2016-01-01

    This study investigates the sensitivity of multispectral reflectivity to changing snow correlation lengths. Matzler's ice-lamellae radiative transfer model was implemented and tested to evaluate the reflectivity of snow correlation lengths at multiple frequencies from the ultraviolet (UV) to the microwave bands. The model reveals that, in the UV to infrared (IR) frequency range, the reflectivity and correlation length are inversely related, whereas reflectivity increases with snow correlation length in the microwave frequency range. The model further shows that the reflectivity behavior can be mainly attributed to scattering rather than absorption for shallow snowpacks. The largest scattering coefficients and reflectivity occur at very small correlation lengths (approximately 10(exp -5 m) for frequencies higher than the IR band. In the microwave range, the largest scattering coefficients are found at millimeter wavelengths. For validation purposes, the ice-lamella model is coupled with a multilayer snow physics model to characterize the reflectivity response of realistic snow hydrological processes. The evolution of the coupled model simulated reflectivities in both the visible and the microwave bands is consistent with satellite-based reflectivity observations in the same frequencies. The model results are also compared with colocated in situ snow correlation length measurements (Cold Land Processes Field Experiment 2002-2003). The analysis and evaluation of model results indicate that the coupled multifrequency radiative transfer and snow hydrology modeling system can be used as a forward operator in a data-assimilation framework to predict the status of snow physical properties, including snow correlation length.

  17. Cloud-based processing of multi-spectral imaging data

    Science.gov (United States)

    Bernat, Amir S.; Bolton, Frank J.; Weiser, Reuven; Levitz, David

    2017-03-01

    Multispectral imaging holds great promise as a non-contact tool for the assessment of tissue composition. Performing multi - spectral imaging on a hand held mobile device would allow to bring this technology and with it knowledge to low resource settings to provide a state of the art classification of tissue health. This modality however produces considerably larger data sets than white light imaging and requires preliminary image analysis for it to be used. The data then needs to be analyzed and logged, while not requiring too much of the system resource or a long computation time and battery use by the end point device. Cloud environments were designed to allow offloading of those problems by allowing end point devices (smartphones) to offload computationally hard tasks. For this end we present a method where the a hand held device based around a smartphone captures a multi - spectral dataset in a movie file format (mp4) and compare it to other image format in size, noise and correctness. We present the cloud configuration used for segmenting images to frames where they can later be used for further analysis.

  18. Application of a novel new multispectral nanoparticle tracking technique

    Science.gov (United States)

    McElfresh, Cameron; Harrington, Tyler; Vecchio, Kenneth S.

    2018-06-01

    Fast, reliable, and accurate particle size analysis techniques must meet the demands of evolving industrial and academic research in areas of functionalized nanoparticle synthesis, advanced materials development, and other nanoscale enabled technologies. In this study a new multispectral particle tracking analysis (m-PTA) technique enabled by the ViewSizer™ 3000 (MANTA Instruments, USA) was evaluated using solutions of monomodal and multimodal gold and polystyrene latex nanoparticles, as well as a spark eroded polydisperse 316L stainless steel nanopowder, and large (non-Brownian) borosilicate particles. It was found that m-PTA performed comparably to the DLS in evaluation of monomodal particle size distributions. When measuring bimodal, trimodal and polydisperse solutions, the m-PTA technique overwhelmingly outperformed traditional dynamic light scattering (DLS) in both peak detection and relative particle concentration analysis. It was also observed that the m-PTA technique is less susceptible to large particle overexpression errors. The ViewSizer™ 3000 was also found to be successful in accurately evaluating sizes and concentrations of monomodal and bimodal sinking borosilicate particles.

  19. Multispectral Image classification using the theories of neural networks

    International Nuclear Information System (INIS)

    Ardisasmita, M.S.; Subki, M.I.R.

    1997-01-01

    Image classification is the one of the important part of digital image analysis. the objective of image classification is to identify and regroup the features occurring in an image into one or several classes in terms of the object. basic to the understanding of multispectral classification is the concept of the spectral response of an object as a function of the electromagnetic radiation and the wavelength of the spectrum. new approaches to classification has been developed to improve the result of analysis, these state-of-the-art classifiers are based upon the theories of neural networks. Neural network classifiers are algorithmes which mimic the computational abilities of the human brain. Artificial neurons are simple emulation's of biological neurons; they take in information from sensors or other artificial neurons, perform very simple operations on this data, and pass the result to other recognize the spectral signature of each image pixel. Neural network image classification has been divided into supervised and unsupervised training procedures. In the supervised approach, examples of each cover type can be located and the computer can compute spectral signatures to categorize all pixels in a digital image into several land cover classes. In supervised classification, spectral signatures are generated by mathematically grouping and it does not require analyst-specified training data. Thus, in the supervised approach we define useful information categories and then examine their spectral reparability; in the unsupervised approach the computer determines spectrally sapable classes and then we define thei information value

  20. An Improved Pansharpening Method for Misaligned Panchromatic and Multispectral Data.

    Science.gov (United States)

    Li, Hui; Jing, Linhai; Tang, Yunwei; Ding, Haifeng

    2018-02-11

    Numerous pansharpening methods were proposed in recent decades for fusing low-spatial-resolution multispectral (MS) images with high-spatial-resolution (HSR) panchromatic (PAN) bands to produce fused HSR MS images, which are widely used in various remote sensing tasks. The effect of misregistration between MS and PAN bands on quality of fused products has gained much attention in recent years. An improved method for misaligned MS and PAN imagery is proposed, through two improvements made on a previously published method named RMI (reduce misalignment impact). The performance of the proposed method was assessed by comparing with some outstanding fusion methods, such as adaptive Gram-Schmidt and generalized Laplacian pyramid. Experimental results show that the improved version can reduce spectral distortions of fused dark pixels and sharpen boundaries between different image objects, as well as obtain similar quality indexes with the original RMI method. In addition, the proposed method was evaluated with respect to its sensitivity to misalignments between MS and PAN bands. It is certified that the proposed method is more robust to misalignments between MS and PAN bands than the other methods.

  1. Multispectral fluorescence imaging techniques for nondestructive food safety inspection

    Science.gov (United States)

    Kim, Moon S.; Lefcourt, Alan M.; Chen, Yud-Ren

    2004-03-01

    The use of spectral sensing has gained acceptance as a rapid means for nondestructive inspection of postharvest food produce. Current technologies generally use color or a single wavelength camera technology. The applicability and sensitivity of these techniques can be expanded through the use of multiple wavelengths. Reflectance in the Vis/NIR is the prevalent spectral technique. Fluorescence, compared to reflectance, is regarded as a more sensitive technique due to its dynamic responses to subtle changes in biological entities. Our laboratory has been exploring fluorescence as a potential means for detection of quality and wholesomeness of food products. Applications of fluorescence sensing require an understanding of the spectral characteristics emanating from constituents and potential contaminants. A number of factors affecting fluorescence emission characteristics are discussed. Because of relatively low fluorescence quantum yield from biological samples, a system with a powerful pulse light source such as a laser coupled with a gated detection device is used to harvest fluorescence, in the presence of ambient light. Several fluorescence sensor platforms developed in our laboratory, including hyperspectral imaging, and laser-induced fluorescence (LIF) and steady-state fluorescence imaging systems with multispectral capabilities are presented. We demonstrate the potential uses of recently developed fluorescence imaging platforms in food safety inspection of apples contaminated with animal feces.

  2. Assigning Main Orientation to an EOH Descriptor on Multispectral Images.

    Science.gov (United States)

    Li, Yong; Shi, Xiang; Wei, Lijun; Zou, Junwei; Chen, Fang

    2015-07-01

    This paper proposes an approach to compute an EOH (edge-oriented histogram) descriptor with main orientation. EOH has a better matching ability than SIFT (scale-invariant feature transform) on multispectral images, but does not assign a main orientation to keypoints. Alternatively, it tends to assign the same main orientation to every keypoint, e.g., zero degrees. This limits EOH to matching keypoints between images of translation misalignment only. Observing this limitation, we propose assigning to keypoints the main orientation that is computed with PIIFD (partial intensity invariant feature descriptor). In the proposed method, SIFT keypoints are detected from images as the extrema of difference of Gaussians, and every keypoint is assigned to the main orientation computed with PIIFD. Then, EOH is computed for every keypoint with respect to its main orientation. In addition, an implementation variant is proposed for fast computation of the EOH descriptor. Experimental results show that the proposed approach performs more robustly than the original EOH on image pairs that have a rotation misalignment.

  3. Microstructured optical fiber-based luminescent biosensing: Is there any light at the end of the tunnel? - A review.

    Science.gov (United States)

    Pidenko, Sergey A; Burmistrova, Natalia A; Shuvalov, Andrey A; Chibrova, Anastasiya A; Skibina, Yulia S; Goryacheva, Irina Y

    2018-08-17

    This review covers the current state of the art of luminescent biosensors based on various types of microstructured optical fiber. The unique optical and structural properties of this type of optical fiber make them one of the most promising integrated platforms for bioassays. The individual sections of this review are devoted to a) classification of microstructured optical fibers, b) microstructured optical fiber materials, c) aspects of biosensing based on the biomolecules incorporated into the microstructured optical fibers, and d) development of models for prediction of the efficiency of luminescent signal processing. The authors' views on current trends and limitations of microstructured optical fibers for biosensing as well as the most promising areas and technologies for application in analytical practice are presented. Copyright © 2017 Elsevier B.V. All rights reserved.

  4. Quantitative research.

    Science.gov (United States)

    Watson, Roger

    2015-04-01

    This article describes the basic tenets of quantitative research. The concepts of dependent and independent variables are addressed and the concept of measurement and its associated issues, such as error, reliability and validity, are explored. Experiments and surveys – the principal research designs in quantitative research – are described and key features explained. The importance of the double-blind randomised controlled trial is emphasised, alongside the importance of longitudinal surveys, as opposed to cross-sectional surveys. Essential features of data storage are covered, with an emphasis on safe, anonymous storage. Finally, the article explores the analysis of quantitative data, considering what may be analysed and the main uses of statistics in analysis.

  5. Quantitative habitability.

    Science.gov (United States)

    Shock, Everett L; Holland, Melanie E

    2007-12-01

    A framework is proposed for a quantitative approach to studying habitability. Considerations of environmental supply and organismal demand of energy lead to the conclusions that power units are most appropriate and that the units for habitability become watts per organism. Extreme and plush environments are revealed to be on a habitability continuum, and extreme environments can be quantified as those where power supply only barely exceeds demand. Strategies for laboratory and field experiments are outlined that would quantify power supplies, power demands, and habitability. An example involving a comparison of various metabolisms pursued by halophiles is shown to be well on the way to a quantitative habitability analysis.

  6. Inverse analysis of non-uniform temperature distributions using multispectral pyrometry

    Science.gov (United States)

    Fu, Tairan; Duan, Minghao; Tian, Jibin; Shi, Congling

    2016-05-01

    Optical diagnostics can be used to obtain sub-pixel temperature information in remote sensing. A multispectral pyrometry method was developed using multiple spectral radiation intensities to deduce the temperature area distribution in the measurement region. The method transforms a spot multispectral pyrometer with a fixed field of view into a pyrometer with enhanced spatial resolution that can give sub-pixel temperature information from a "one pixel" measurement region. A temperature area fraction function was defined to represent the spatial temperature distribution in the measurement region. The method is illustrated by simulations of a multispectral pyrometer with a spectral range of 8.0-13.0 μm measuring a non-isothermal region with a temperature range of 500-800 K in the spot pyrometer field of view. The inverse algorithm for the sub-pixel temperature distribution (temperature area fractions) in the "one pixel" verifies this multispectral pyrometry method. The results show that an improved Levenberg-Marquardt algorithm is effective for this ill-posed inverse problem with relative errors in the temperature area fractions of (-3%, 3%) for most of the temperatures. The analysis provides a valuable reference for the use of spot multispectral pyrometers for sub-pixel temperature distributions in remote sensing measurements.

  7. Wide field-of-view dual-band multispectral muzzle flash detection

    Science.gov (United States)

    Montoya, J.; Melchor, J.; Spiliotis, P.; Taplin, L.

    2013-06-01

    Sensor technologies are undergoing revolutionary advances, as seen in the rapid growth of multispectral methodologies. Increases in spatial, spectral, and temporal resolution, and in breadth of spectral coverage, render feasible sensors that function with unprecedented performance. A system was developed that addresses many of the key hardware requirements for a practical dual-band multispectral acquisition system, including wide field of view and spectral/temporal shift between dual bands. The system was designed using a novel dichroic beam splitter and dual band-pass filter configuration that creates two side-by-side images of a scene on a single sensor. A high-speed CMOS sensor was used to simultaneously capture data from the entire scene in both spectral bands using a short focal-length lens that provided a wide field-of-view. The beam-splitter components were arranged such that the two images were maintained in optical alignment and real-time intra-band processing could be carried out using only simple arithmetic on the image halves. An experiment related to limitations of the system to address multispectral detection requirements was performed. This characterized the system's low spectral variation across its wide field of view. This paper provides lessons learned on the general limitation of key hardware components required for multispectral muzzle flash detection, using the system as a hardware example combined with simulated multispectral muzzle flash and background signatures.

  8. Multispectral code excited linear prediction coding and its application in magnetic resonance images.

    Science.gov (United States)

    Hu, J H; Wang, Y; Cahill, P T

    1997-01-01

    This paper reports a multispectral code excited linear prediction (MCELP) method for the compression of multispectral images. Different linear prediction models and adaptation schemes have been compared. The method that uses a forward adaptive autoregressive (AR) model has been proven to achieve a good compromise between performance, complexity, and robustness. This approach is referred to as the MFCELP method. Given a set of multispectral images, the linear predictive coefficients are updated over nonoverlapping three-dimensional (3-D) macroblocks. Each macroblock is further divided into several 3-D micro-blocks, and the best excitation signal for each microblock is determined through an analysis-by-synthesis procedure. The MFCELP method has been applied to multispectral magnetic resonance (MR) images. To satisfy the high quality requirement for medical images, the error between the original image set and the synthesized one is further specified using a vector quantizer. This method has been applied to images from 26 clinical MR neuro studies (20 slices/study, three spectral bands/slice, 256x256 pixels/band, 12 b/pixel). The MFCELP method provides a significant visual improvement over the discrete cosine transform (DCT) based Joint Photographers Expert Group (JPEG) method, the wavelet transform based embedded zero-tree wavelet (EZW) coding method, and the vector tree (VT) coding method, as well as the multispectral segmented autoregressive moving average (MSARMA) method we developed previously.

  9. A Cost Effective Multi-Spectral Scanner for Natural Gas Detection

    Energy Technology Data Exchange (ETDEWEB)

    Yudaya Sivathanu; Jongmook Lim; Vinoo Narayanan; Seonghyeon Park

    2005-12-07

    The objective of this project is to design, fabricate and demonstrate a cost effective, multi-spectral scanner for natural gas leak detection in transmission and distribution pipelines. During the first year of the project, a laboratory version of the multi-spectral scanner was designed, fabricated, and tested at EnUrga Inc. The multi-spectral scanner was also evaluated using a blind Department of Energy study at the Rocky Mountain Oilfield Testing Center. The performance of the scanner was inconsistent during the blind study. However, most of the leaks were outside the view of the multi-spectral scanner that was developed during the first year of the project. Therefore, a definite evaluation of the capability of the scanner was not obtained. Despite the results, sufficient number of plumes was detected fully confirming the feasibility of the multi-spectral scanner. During the second year, the optical design of the scanner was changed to improve the sensitivity of the system. Laboratory tests show that the system can reliably detect small leaks (20 SCFH) at 30 to 50 feet. A prototype scanner was built and evaluated during the second year of the project. Only laboratory evaluations were completed during the second year. The laboratory evaluations show the feasibility of using the scanner to determine natural gas pipeline leaks. Further field evaluations and optimization of the scanner are required before commercialization of the scanner can be initiated.

  10. LANDSAT 8 MULTISPECTRAL AND PANSHARPENED IMAGERY PROCESSING ON THE STUDY OF CIVIL ENGINEERING ISSUES

    Directory of Open Access Journals (Sweden)

    M. A. Lazaridou

    2016-06-01

    Full Text Available Scientific and professional interests of civil engineering mainly include structures, hydraulics, geotechnical engineering, environment, and transportation issues. Topics included in the context of the above may concern urban environment issues, urban planning, hydrological modelling, study of hazards and road construction. Land cover information contributes significantly on the study of the above subjects. Land cover information can be acquired effectively by visual image interpretation of satellite imagery or after applying enhancement routines and also by imagery classification. The Landsat Data Continuity Mission (LDCM – Landsat 8 is the latest satellite in Landsat series, launched in February 2013. Landsat 8 medium spatial resolution multispectral imagery presents particular interest in extracting land cover, because of the fine spectral resolution, the radiometric quantization of 12bits, the capability of merging the high resolution panchromatic band of 15 meters with multispectral imagery of 30 meters as well as the policy of free data. In this paper, Landsat 8 multispectral and panchromatic imageries are being used, concerning surroundings of a lake in north-western Greece. Land cover information is extracted, using suitable digital image processing software. The rich spectral context of the multispectral image is combined with the high spatial resolution of the panchromatic image, applying image fusion – pansharpening, facilitating in this way visual image interpretation to delineate land cover. Further processing concerns supervised image classification. The classification of pansharpened image preceded multispectral image classification. Corresponding comparative considerations are also presented.

  11. Feasibility study and quality assessment of unmanned aircraft system-derived multispectral images

    Science.gov (United States)

    Chang, Kuo-Jen

    2017-04-01

    The purpose of study is to explore the precision and the applicability of UAS-derived multispectral images. In this study, the Micro-MCA6 multispectral camera was mounted on quadcopter. The Micro-MCA6 shoot images synchronized of each single band. By means of geotagged images and control points, the orthomosaic images of each single band generated firstly by 14cm resolution. The multispectral image was merged complete with 6 bands. In order to improve the spatial resolution, the 6 band image fused with 9cm resolution image taken from RGB camera. Quality evaluation of the image is verified of the each single band by using control points and check points. The standard deviations of errors are within 1 to 2 pixel resolution of each band. The quality of the multispectral image is compared with 3 cm resolution orthomosaic RGB image gathered from UAV in the same mission, as well. The standard deviations of errors are within 2 to 3 pixel resolution. The result shows that the errors resulting from the blurry and the band dislocation of the objects edge identification. To the end, the normalized difference vegetation index (NDVI) extracted from the image to explore the condition of vegetation and the nature of the environment. This study demonstrates the feasibility and the capability of the high resolution multispectral images.

  12. Detection of Melanoma Metastases in Resected Human Lymph Nodes by Noninvasive Multispectral Photoacoustic Imaging

    Directory of Open Access Journals (Sweden)

    Gerrit Cornelis Langhout

    2014-01-01

    Full Text Available Objective. Sentinel node biopsy in patients with cutaneous melanoma improves staging, provides prognostic information, and leads to an increased survival in node-positive patients. However, frozen section analysis of the sentinel node is not reliable and definitive histopathology evaluation requires days, preventing intraoperative decision-making and immediate therapy. Photoacoustic imaging can evaluate intact lymph nodes, but specificity can be hampered by other absorbers such as hemoglobin. Near infrared multispectral photoacoustic imaging is a new approach that has the potential to selectively detect melanin. The purpose of the present study is to examine the potential of multispectral photoacoustic imaging to identify melanoma metastasis in human lymph nodes. Methods. Three metastatic and nine benign lymph nodes from eight melanoma patients were scanned ex vivo using a Vevo LAZR© multispectral photoacoustic imager and were spectrally analyzed per pixel. The results were compared to histopathology as gold standard. Results. The nodal volume could be scanned within 20 minutes. An unmixing procedure was proposed to identify melanoma metastases with multispectral photoacoustic imaging. Ultrasound overlay enabled anatomical correlation. The penetration depth of the photoacoustic signal was up to 2 cm. Conclusion. Multispectral three-dimensional photoacoustic imaging allowed for selective identification of melanoma metastases in human lymph nodes.

  13. A Comparative Study of Land Cover Classification by Using Multispectral and Texture Data

    Directory of Open Access Journals (Sweden)

    Salman Qadri

    2016-01-01

    Full Text Available The main objective of this study is to find out the importance of machine vision approach for the classification of five types of land cover data such as bare land, desert rangeland, green pasture, fertile cultivated land, and Sutlej river land. A novel spectra-statistical framework is designed to classify the subjective land cover data types accurately. Multispectral data of these land covers were acquired by using a handheld device named multispectral radiometer in the form of five spectral bands (blue, green, red, near infrared, and shortwave infrared while texture data were acquired with a digital camera by the transformation of acquired images into 229 texture features for each image. The most discriminant 30 features of each image were obtained by integrating the three statistical features selection techniques such as Fisher, Probability of Error plus Average Correlation, and Mutual Information (F + PA + MI. Selected texture data clustering was verified by nonlinear discriminant analysis while linear discriminant analysis approach was applied for multispectral data. For classification, the texture and multispectral data were deployed to artificial neural network (ANN: n-class. By implementing a cross validation method (80-20, we received an accuracy of 91.332% for texture data and 96.40% for multispectral data, respectively.

  14. Landsat 8 Multispectral and Pansharpened Imagery Processing on the Study of Civil Engineering Issues

    Science.gov (United States)

    Lazaridou, M. A.; Karagianni, A. Ch.

    2016-06-01

    Scientific and professional interests of civil engineering mainly include structures, hydraulics, geotechnical engineering, environment, and transportation issues. Topics included in the context of the above may concern urban environment issues, urban planning, hydrological modelling, study of hazards and road construction. Land cover information contributes significantly on the study of the above subjects. Land cover information can be acquired effectively by visual image interpretation of satellite imagery or after applying enhancement routines and also by imagery classification. The Landsat Data Continuity Mission (LDCM - Landsat 8) is the latest satellite in Landsat series, launched in February 2013. Landsat 8 medium spatial resolution multispectral imagery presents particular interest in extracting land cover, because of the fine spectral resolution, the radiometric quantization of 12bits, the capability of merging the high resolution panchromatic band of 15 meters with multispectral imagery of 30 meters as well as the policy of free data. In this paper, Landsat 8 multispectral and panchromatic imageries are being used, concerning surroundings of a lake in north-western Greece. Land cover information is extracted, using suitable digital image processing software. The rich spectral context of the multispectral image is combined with the high spatial resolution of the panchromatic image, applying image fusion - pansharpening, facilitating in this way visual image interpretation to delineate land cover. Further processing concerns supervised image classification. The classification of pansharpened image preceded multispectral image classification. Corresponding comparative considerations are also presented.

  15. The multispectral instrument of the Sentinel2 program

    Science.gov (United States)

    Cazaubiel, V.; Chorvalli, Vincent; Miesch, Christophe

    2017-11-01

    The Sentinel-2 program will provide a permanent record of comprehensive data to help inform the agricul-tural sector (utilisation, coverage), forestry industry (population, damage, forest fires), disaster control (management, early warning) and humanitarian relief programmes. Sentinel-2 will also be able to observe natural disasters such as floods, volcanic eruptions, subsidence and landslides. In the Sentinel-2 mission programme, Astrium in Friedrichshafen is responsible for the satellite's system design and platform, as well as for satellite integration and testing. Astrium Toulouse will supply the Multi-Spectral imaging Instrument (MSI), and Astrium Spain will be in charge of the satellite's structure and will produce its thermal equipment and cable harness. The industrial core team also comprises Jena Optronik (Germany), Boostec (France), Sener and GMV (Spain). Sentinel-2 is intended to image the Earth's landmasses from its orbit for at least 7.25 years. In addition, its onboardresources will be designed so that the mission can be prolonged by an extra five years. From 2012 onwards, the 1.1-metric-ton satellite will circle the Earth in a sun-synchronous, polar orbit at an altitude of 786kilometres, fully covering the planet's landmasses in just ten days. The multi-spectral instrument (MSI) will generate optical images in 13 spectral channels in the visible and shortwave infrared range down to a resolution of 10 metres with an image width of 290 kilometres. The instrument is composed of two main parts: • The telescope assembly , combining in one instrument both VNIR and SWIR channels, is mounted on the upper plate of the Bus • The Video and Compression Electronic Units mounted inside the Bus. This telescope is based on a Three Mirror Anastigmat optical concept. This three mirror optical combination is corrected from spherical aberration, coma and astigmatism. It provides a large field of view with very good optical quality. The telescope mirrors and

  16. An adaptive regularization parameter choice strategy for multispectral bioluminescence tomography

    Energy Technology Data Exchange (ETDEWEB)

    Feng Jinchao; Qin Chenghu; Jia Kebin; Han Dong; Liu Kai; Zhu Shouping; Yang Xin; Tian Jie [Medical Image Processing Group, Institute of Automation, Chinese Academy of Sciences, P. O. Box 2728, Beijing 100190 (China); College of Electronic Information and Control Engineering, Beijing University of Technology, Beijing 100124 (China); Medical Image Processing Group, Institute of Automation, Chinese Academy of Sciences, P. O. Box 2728, Beijing 100190 (China); Medical Image Processing Group, Institute of Automation, Chinese Academy of Sciences, P. O. Box 2728, Beijing 100190 (China) and School of Life Sciences and Technology, Xidian University, Xi' an 710071 (China)

    2011-11-15

    Purpose: Bioluminescence tomography (BLT) provides an effective tool for monitoring physiological and pathological activities in vivo. However, the measured data in bioluminescence imaging are corrupted by noise. Therefore, regularization methods are commonly used to find a regularized solution. Nevertheless, for the quality of the reconstructed bioluminescent source obtained by regularization methods, the choice of the regularization parameters is crucial. To date, the selection of regularization parameters remains challenging. With regards to the above problems, the authors proposed a BLT reconstruction algorithm with an adaptive parameter choice rule. Methods: The proposed reconstruction algorithm uses a diffusion equation for modeling the bioluminescent photon transport. The diffusion equation is solved with a finite element method. Computed tomography (CT) images provide anatomical information regarding the geometry of the small animal and its internal organs. To reduce the ill-posedness of BLT, spectral information and the optimal permissible source region are employed. Then, the relationship between the unknown source distribution and multiview and multispectral boundary measurements is established based on the finite element method and the optimal permissible source region. Since the measured data are noisy, the BLT reconstruction is formulated as l{sub 2} data fidelity and a general regularization term. When choosing the regularization parameters for BLT, an efficient model function approach is proposed, which does not require knowledge of the noise level. This approach only requests the computation of the residual and regularized solution norm. With this knowledge, we construct the model function to approximate the objective function, and the regularization parameter is updated iteratively. Results: First, the micro-CT based mouse phantom was used for simulation verification. Simulation experiments were used to illustrate why multispectral data were used

  17. Active multispectral reflection fingerprinting of persistent chemical agents

    Science.gov (United States)

    Tholl, H. D.; Münzhuber, F.; Kunz, J.; Raab, M.; Rattunde, M.; Hugger, S.; Gutty, F.; Grisard, A.; Larat, C.; Papillon, D.; Schwarz, M.; Lallier, E.; Kastek, M.; Piatkowski, T.; Brygo, F.; Awanzino, C.; Wilsenack, F.; Lorenzen, A.

    2017-10-01

    Remote detection of toxic chemicals of very low vapour pressure deposited on surfaces in form of liquid films, droplets or powder is a capability that is needed to protect operators and equipment in chemical warfare scenarios and in industrial environments. Infrared spectroscopy is a suitable means to support this requirement. Available instruments based on passive emission spectroscopy have difficulties in discriminating the infrared emission spectrum of the surface background from that of the contamination. Separation of background and contamination is eased by illuminating the surface with a spectrally tune-able light source and by analyzing the reflectivity spectrum. The project AMURFOCAL (Active Multispectral Reflection Fingerprinting of Persistent Chemical Agents) has the research topic of stand-off detection and identification of chemical warfare agents (CWAs) with amplified quantum cascade laser technology in the long-wave infrared spectral range. The project was conducted under the Joint Investment Programme (JIP) on CBRN protection funded through the European Defence Agency (EDA). The AMURFOCAL instrument comprises a spectrally narrow tune-able light source with a broadband infrared detector and chemometric data analysis software. The light source combines an external cavity quantum cascade laser (EC-QCL) with an optical parametric amplifier (OPA) to boost the peak output power of a short laser pulse tune-able over the infrared fingerprint region. The laser beam is focused onto a target at a distance between 10 and 20 m. A 3D data cube is registered by tuning the wavelength of the laser emission while recording the received signal scattered off the target using a multi-element infrared detector. A particular chemical is identified through the extraction of its characteristic spectral fingerprint out of the measured data. The paper describes the AMURFOCAL instrument, its functional units, and its principles of operation.

  18. RIGOROUS GEOREFERENCING OF ALSAT-2A PANCHROMATIC AND MULTISPECTRAL IMAGERY

    Directory of Open Access Journals (Sweden)

    I. Boukerch

    2013-04-01

    Full Text Available The exploitation of the full geometric capabilities of the High-Resolution Satellite Imagery (HRSI, require the development of an appropriate sensor orientation model. Several authors studied this problem; generally we have two categories of geometric models: physical and empirical models. Based on the analysis of the metadata provided with ALSAT-2A, a rigorous pushbroom camera model can be developed. This model has been successfully applied to many very high resolution imagery systems. The relation between the image and ground coordinates by the time dependant collinearity involving many coordinates systems has been tested. The interior orientation parameters must be integrated in the model, the interior parameters can be estimated from the viewing angles corresponding to the pointing directions of any detector, these values are derived from cubic polynomials provided in the metadata. The developed model integrates all the necessary elements with 33 unknown. All the approximate values of the 33 unknowns parameters may be derived from the informations contained in the metadata files provided with the imagery technical specifications or they are simply fixed to zero, so the condition equation is linearized and solved using SVD in a least square sense in order to correct the initial values using a suitable number of well-distributed GCPs. Using Alsat-2A images over the town of Toulouse in the south west of France, three experiments are done. The first is about 2D accuracy analysis using several sets of parameters. The second is about GCPs number and distribution. The third experiment is about georeferencing multispectral image by applying the model calculated from panchromatic image.

  19. Preliminary Results Of PCA On MRO CRISM Multispectral Images

    Science.gov (United States)

    Klassen, David R.; Smith, M. D.

    2008-09-01

    Mars Reconnaissance Orbiter arrived at Mars in March 2006 and by September had achieved its science-phase orbit with the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) beginning its visible to near-infrared (VIS/NIR) spectral imaging shortly thereafter. One of the goals of CRISM is to fill in the spatial gaps between the various targeted observations, eventually mapping the entire surface. Due to the large volume of data this would create, the instrument works in a reduced spectral sampling mode creating "multispectral” images. From this data we can create image cubes using 70 wavelengths from 0.410 to 3.504 µm. We present here a preliminary analysis of these multispectral mode data products using the technique of Principal Components Analysis. Previous work with ground-based images has shown that over an entire visible hemisphere, there are only three to four meaningful components out of 32-105 wavelengths over 1.5-4.1 µm. The first two of these components are fairly consistent over all time intervals from day-to-day and season-to-season. [1-4] The preliminary work on the CRISM images cubes implies similar results_three to four significant principal components that are fairly consistent over time. We will show these components and a rough linear mixture modeling based on in-data spectral endmembers derived from the extrema of the principal components [5]. References: [1] Klassen, D. R. and Bell III, J. F. (2001) BAAS 33, 1069. [2] Klassen, D. R. and Bell III, J. F. (2003) BAAS, 35, 936. [3] Klassen, D. R., Wark, T. J., Cugliotta, C. G. (2005) BAAS, 37, 693. [4] Klassen, D. R. and Bell III, J. F. (2007) in preparation. [5] Klassen, D. R. and Bell III, J. F. (2000) BAAS, 32, 1105.

  20. Multispectral Observations of Explosive Gas Emissions from Santiaguito, Guatemala

    Science.gov (United States)

    Carn, S. A.; Watson, M.; Thomas, H.; Rodriguez, L. A.; Campion, R.; Prata, F. J.

    2016-12-01

    Santiaguito volcano, Guatemala, has been persistently active for decades, producing frequent explosions from its actively growing lava dome. Repeated release of volcanic gases contains information about conduit processes during the cyclical explosions at Santiaguito, but the composition of the gas phase and the amount of volatiles released in each explosion remains poorly constrained. In addition to its persistent activity, Santiaguito offers an exceptional opportunity to investigate lava dome degassing processes since the upper surface of the active lava dome can be viewed from the summit of neighboring Santa Maria. In January 2016 we conducted multi-spectral observations of Santiaguito's explosive eruption plumes and passive degassing from multiple perspectives as part of the first NSF-sponsored `Workshop on Volcanoes' instrument deployment. Gas measurements included open-path Fourier-Transform infrared (OP-FTIR) spectroscopy from the Santa Maria summit, coincident with ultraviolet (UV) and infrared (IR) camera and UV Differential Optical Absorption Spectroscopy (DOAS) from the El Mirador site below Santiaguito's active Caliente lava dome. Using the OP-FTIR in passive mode with the Caliente lava dome as the source of IR radiation, we were able to collect IR spectra at high temporal resolution prior to and during two explosions of Santiaguito on 7-8 January, with volcanic SO2 and H2O emissions detected. UV and IR camera data provide constraints on the total SO2 burden in the emissions (and potentially the volcanic ash burden), which coupled with the FTIR gas ratios provides new constraints on the mass and composition of volatiles driving explosions at Santiaguito. All gas measurements indicate significant volatile release during explosions with limited degassing during repose periods. In this presentation we will present ongoing analysis of the unique Santiaguito gas dataset including estimation of the total volatile mass released in explosions and an

  1. Multispectral imaging of organ viability during uterine transplantation surgery

    Science.gov (United States)

    Clancy, Neil T.; Saso, Srdjan; Stoyanov, Danail; Sauvage, Vincent; Corless, David J.; Boyd, Michael; Noakes, David E.; Thum, Meen-Yau; Ghaem-Maghami, Sadaf; Smith, J. R.; Elson, Daniel S.

    2014-02-01

    Uterine transplantation surgery has been proposed as a treatment for permanent absolute uterine factor infertility (AUFI) in the case of loss of the uterus. Due to the complexity of the vasculature correct reanastomosis of the blood supply during transplantation surgery is a crucial step to ensure reperfusion and viability of the organ. While techniques such as fluorescent dye imaging have been proposed to visualise perfusion there is no gold standard for intraoperative visualisation of tissue oxygenation. In this paper results from a liquid crystal tuneable filter (LCTF)-based multispectral imaging (MSI) laparoscope are described. The system was used to monitor uterine oxygen saturation (SaO2) before and after transplantation. Results from surgeries on two animal models (rabbits and sheep) are presented. A feature-based registration algorithm was used to correct for misalignment induced by breathing or peristalsis in the tissues of interest prior to analysis. An absorption spectrum was calculated at each spatial pixel location using reflectance data from a reference standard, and the relative contributions from oxy- and deoxyhaemoglobin were calculated using a least squares regression algorithm with non-negativity constraints. Results acquired during animal surgeries show that cornual oxygenation changes are consistent with those observed in point measurements taken using a pulse oximeter, showing reduced SaO2 following reanastomosis. Values obtained using the MSI laparoscope were lower than those taken with the pulse oximeter, which may be due to the latter's use of the pulsatile arterial blood signal. Future work incorporating immunological test results will help to correlate SaO2 levels with surgical outcomes.

  2. A virtual seed file: the use of multispectral image analysis in the management of genebank seed accessions

    DEFF Research Database (Denmark)

    Adsetts Edberg Hansen, Michael; R. Hay, Fiona; Carstensen, Jens Michael

    2015-01-01

    We present a method for multispectral seed phenotyping as a fast and robust tool for managing genebank accessions. A multispectral vision system was used to take images of the seeds of 20 diverse varieties of rice (approximately 30 seeds for each variety). This was followed by extraction of feature...

  3. Multispectral imaging reveals biblical-period inscription unnoticed for half a century.

    Directory of Open Access Journals (Sweden)

    Shira Faigenbaum-Golovin

    Full Text Available Most surviving biblical period Hebrew inscriptions are ostraca-ink-on-clay texts. They are poorly preserved and once unearthed, fade rapidly. Therefore, proper and timely documentation of ostraca is essential. Here we show a striking example of a hitherto invisible text on the back side of an ostracon revealed via multispectral imaging. This ostracon, found at the desert fortress of Arad and dated to ca. 600 BCE (the eve of Judah's destruction by Nebuchadnezzar, has been on display for half a century. Its front side has been thoroughly studied, while its back side was considered blank. Our research revealed three lines of text on the supposedly blank side and four "new" lines on the front side. Our results demonstrate the need for multispectral image acquisition for both sides of all ancient ink ostraca. Moreover, in certain cases we recommend employing multispectral techniques for screening newly unearthed ceramic potsherds prior to disposal.

  4. High-speed multispectral videography with a periscope array in a spectral shaper.

    Science.gov (United States)

    Hashimoto, Kazuki; Mizuno, Hikaru; Nakagawa, Keiichi; Horisaki, Ryoichi; Iwasaki, Atsushi; Kannari, Fumihiko; Sakuma, Ichiro; Goda, Keisuke

    2014-12-15

    We present a simple method for continuous snapshot multispectral imaging or multispectral videography that achieves high-speed spectral video recording without the need for mechanical scanning and much computation for datacube construction. The enabling component of this method is an array of periscopes placed in a prism-based spectral shaper that spectrally separates the image without image deformation. As a proof-of-principle demonstration, we show five-color multispectral video recording in the visible range (200×200 pixels per spectral image frame) at a record high frame rate of at least 2800 frames per second. Our experimental results indicate that this method holds promise for various industrial and biomedical applications such as remote sensing, food inspection, and endoscopy.

  5. Quantitative Finance

    Science.gov (United States)

    James, Jessica

    2017-01-01

    Quantitative finance is a field that has risen to prominence over the last few decades. It encompasses the complex models and calculations that value financial contracts, particularly those which reference events in the future, and apply probabilities to these events. While adding greatly to the flexibility of the market available to corporations and investors, it has also been blamed for worsening the impact of financial crises. But what exactly does quantitative finance encompass, and where did these ideas and models originate? We show that the mathematics behind finance and behind games of chance have tracked each other closely over the centuries and that many well-known physicists and mathematicians have contributed to the field.

  6. Foreign object detection in multispectral X-ray images of food items using sparse discriminant analysis

    DEFF Research Database (Denmark)

    Einarsson, Gudmundur; Jensen, Janus Nørtoft; Paulsen, Rasmus Reinhold

    2017-01-01

    Non-invasive food inspection and quality assurance are becoming viable techniques in food production due to the introduction of fast and accessible multispectral X-ray scanners. However, the novel devices produce massive amount of data and there is a need for fast and accurate algorithms for proc......Non-invasive food inspection and quality assurance are becoming viable techniques in food production due to the introduction of fast and accessible multispectral X-ray scanners. However, the novel devices produce massive amount of data and there is a need for fast and accurate algorithms...... computational properties, which allows for fast classification of items in new images....

  7. Vicarious Radiometric Calibration of a Multispectral Camera on Board an Unmanned Aerial System

    Directory of Open Access Journals (Sweden)

    Susana Del Pozo

    2014-02-01

    Full Text Available Combinations of unmanned aerial platforms and multispectral sensors are considered low-cost tools for detailed spatial and temporal studies addressing spectral signatures, opening a broad range of applications in remote sensing. Thus, a key step in this process is knowledge of multi-spectral sensor calibration parameters in order to identify the physical variables collected by the sensor. This paper discusses the radiometric calibration process by means of a vicarious method applied to a high-spatial resolution unmanned flight using low-cost artificial and natural covers as control and check surfaces, respectively.

  8. Improvement in glucose biosensing response of electrochemically grown polypyrrole nanotubes by incorporating crosslinked glucose oxidase.

    Science.gov (United States)

    Palod, Pragya Agar; Singh, Vipul

    2015-10-01

    In this paper a novel enzymatic glucose biosensor has been reported in which platinum coated alumina membranes (Anodisc™s) have been employed as templates for the growth of polypyrrole (PPy) nanotube arrays using electrochemical polymerization. The PPy nanotube arrays were grown on Anodisc™s of pore diameter 100 nm using potentiostatic electropolymerization. In order to optimize the polymerization time, immobilization of glucose oxidase (GOx) was first performed using physical adsorption followed by measuring its biosensing response which was examined amperometrically for increasing concentrations of glucose. In order to further improve the sensing performance of the biosensor fabricated for optimum polymerization duration, enzyme immobilization was carried out using cross-linking with glutaraldehyde and bovine serum albumin (BSA). Approximately six fold enhancement in the sensitivity was observed in the fabricated electrodes. The biosensors also showed a wide range of linear operation (0.2-13 mM), limit of detection of 50 μM glucose concentration, excellent selectivity for glucose, notable reliability for real sample detection and substantially improved shelf life. Copyright © 2015 Elsevier B.V. All rights reserved.

  9. Molecularly imprinted polymers for sample preparation and biosensing in food analysis: Progress and perspectives.

    Science.gov (United States)

    Ashley, Jon; Shahbazi, Mohammad-Ali; Kant, Krishna; Chidambara, Vinayaka Aaydha; Wolff, Anders; Bang, Dang Duong; Sun, Yi

    2017-05-15

    Molecularly imprinted polymers (MIPs) are biomimetics which can selectively bind to analytes of interest. One of the most interesting areas where MIPs have shown the biggest potential is food analysis. MIPs have found use as sorbents in sample preparation attributed to the high selectivity and high loading capacity. MIPs have been intensively employed in classical solid-phase extraction and solid-phase microextraction. More recently, MIPs have been combined with magnetic bead extraction, which greatly simplifies sample handling procedures. Studies have consistently shown that MIPs can effectively minimize complex food matrix effects, and improve recoveries and detection limits. In addition to sample preparation, MIPs have also been viewed as promising alternatives to bio-receptors due to the inherent molecular recognition abilities and the high stability in harsh chemical and physical conditions. MIPs have been utilized as receptors in biosensing platforms such as electrochemical, optical and mass biosensors to detect various analytes in food. In this review, we will discuss the current state-of-the-art of MIP synthesis and applications in the context of food analysis. We will highlight the imprinting methods which are applicable for imprinting food templates, summarize the recent progress in using MIPs for preparing and analysing food samples, and discuss the current limitations in the commercialisation of MIPs technology. Finally, future perspectives will be given. Copyright © 2017 Elsevier B.V. All rights reserved.

  10. Chitosan: An undisputed bio-fabrication material for tissue engineering and bio-sensing applications.

    Science.gov (United States)

    Baranwal, Anupriya; Kumar, Ashutosh; Priyadharshini, A; Oggu, Gopi Suresh; Bhatnagar, Ira; Srivastava, Ananya; Chandra, Pranjal

    2018-04-15

    Biopolymers have been serving the mankind in various ways since long. Over the last few years, these polymers have found great demand in various domains which includes bio medicine, tissue engineering, bio sensor fabrications etc. because of their excellent bio compatibility. In this context, chitosan has found global attention due to its environmentally benign nature, biocompatibility, biodegradability, and ease of availability. In last one decade or so, extensive research in active biomaterials, like chitosan has led to the development of novel delivery systems for drugs, genes, and biomolecules; and regenerative medicine. Additionally, chitosan has also witnessed its usage in functionalization of biocompatible materials, nanoparticle (NP) synthesis, and immobilization of various bio-recognition elements (BREs) to form active bio-surfaces with great ease. Keeping these aspects in mind, we have written a comprehensive review which aims to acquaint its readers with the exceptional properties of chitosan and its usage in the domain of biomedicine, tissue engineering, and biosensor fabrication. Herein, we have briefly explained various aspects of direct utilization of chitosan and then presented vivid strategies towards formulation of chitosan based nanocomposites for biomedicine, tissue engineering, and biosensing applications. Copyright © 2018 Elsevier B.V. All rights reserved.

  11. Urea impedimetric biosensing using electrospun nanofibers modified with zinc oxide nanoparticles

    Science.gov (United States)

    Migliorini, Fernanda L.; Sanfelice, Rafaela C.; Mercante, Luiza A.; Andre, Rafaela S.; Mattoso, Luiz H. C.; Correa, Daniel. S.

    2018-06-01

    Reliable analytical techniques to evaluate dairy products, including milk, are of outmost importance to ensure food safety against contaminants. Among possible substances employed as adulterants in milk, urea raises deep concern due to its harmful effects to consumer's health. In the present study, a biosensing platform was developed to be applied in the electrochemical detection of urea. The sensing platform was fabricated using polymeric electrospun nanofibers of polyamide 6 (PA6) and polypyrrole (PPy) deposited onto fluorine doped tin oxide (FTO) electrodes, which were then modified with zinc oxide nanoparticles (ZnO). This material showed excellent properties for the immobilization of urease enzyme, conferring the FTO/PA6/PPy/ZnO/urease electrode high sensitivity for urea detection within the concentration range between 0.1 and 250 mg dL-1 with a limit of detection of 0.011 mg dL-1. The results achieved evidence the potential of electrospun nanofibers-based electrodes for applications in biosensors aiming at dairy products analysis.

  12. In situ biosensing of the nanomechanical property and electrochemical spectroscopy of Streptococcus mutans-containing biofilms

    Science.gov (United States)

    Haochih Liu, Bernard; Li, Kun-Lin; Kang, Kai-Li; Huang, Wen-Ke; Liao, Jiunn-Der

    2013-07-01

    This work presents in situ biosensing approaches to study the nanomechanical and electrochemical behaviour of Streptococcus mutans biofilms under different cultivation conditions and microenvironments. The surface characteristics and sub-surface electrochemistry of the cell wall of S. mutans were measured by atomic force microscopy (AFM) based techniques to monitor the in situ biophysical status of biofilms under common anti-pathogenic procedures such as ultraviolet (UV) radiation and alcohol treatment. The AFM nanoindentation suggested a positive correlation between nanomechanical strength and the level of UV radiation of S. mutans; scanning impedance spectroscopy of dehydrated biofilms revealed reduced electrical resistance that is distinctive from that of living biofilms, which can be explained by the discharge of cytoplasm after alcohol treatment. Furthermore, the localized elastic moduli of four regions of the biofilm were studied: septum (Z-ring), cell wall, the interconnecting area between two cells and extracellular polymeric substance (EPS) area. The results indicated that cell walls exhibit the highest elastic modulus, followed by Z-ring, interconnect and EPS. Our approach provides an effective alternative for the characterization of the viability of living cells without the use of biochemical labelling tools such as fluorescence dyeing, and does not rely on surface binding or immobilization for detection. These AFM-based techniques can be very promising approaches when the conventional methods fall short.

  13. Highly anisotropic black phosphorous-graphene hybrid architecture for ultrassensitive plasmonic biosensing: Theoretical insight

    Science.gov (United States)

    Yuan, Yufeng; Yu, Xiantong; Ouyang, Qingling; Shao, Yonghong; Song, Jun; Qu, Junle; Yong, Ken-Tye

    2018-04-01

    This study proposed a novel highly anisotropic surface plasmon resonance (SPR) biosensor employing emerging 2D black phosphorus (BP) and graphene atomic layers. Light absorption and energy loss were well balanced by optimizing gold film thickness and number of BP layers to generate the strongest SPR excitation. The proposed SPR biosensor was designed by the phase-modulation approach and is more sensitive to biomolecule bindings, providing 3 orders of magnitude higher sensitivity than the red-shift in SPR angle. Our results show the optimized configuration was 48 nm Au film coated with 4-layer BP crystal to produce the sharpest phase variation (up to 89.8975°), and lowest minimum reflectivity (1.9119  ×  10-7). Detection sensitivity up to 7.4914  ×  104 degree/refractive index unit is almost 4.5 times enhanced compared to monolayer graphene-based SPR sensors with 48 nm Au film. The anisotropic BP layers act as a polarizer, so the proposed SPR biosensor would exhibit optically tunable detection sensitivity, making it a promising candidate for exploring highly anisotropic platforms in biosensing.

  14. Thickness controlled sol-gel silica films for plasmonic bio-sensing devices

    Energy Technology Data Exchange (ETDEWEB)

    Figus, Cristiana, E-mail: cristiana.figus@dsf.unica.it; Quochi, Francesco, E-mail: cristiana.figus@dsf.unica.it; Artizzu, Flavia, E-mail: cristiana.figus@dsf.unica.it; Saba, Michele, E-mail: cristiana.figus@dsf.unica.it; Marongiu, Daniela, E-mail: cristiana.figus@dsf.unica.it; Mura, Andrea; Bongiovanni, Giovanni [Dipartimento di Fisica - University of Cagliari, S.P. Km 0.7, I-09042 Monserrato (Canada) (Italy); Floris, Francesco; Marabelli, Franco; Patrini, Maddalena; Fornasari, Lucia [Dipartimento di Fisica - University of Pavia, Via Agostino Bassi 6, I-27100 Pavia (PV) (Italy); Pellacani, Paola; Valsesia, Andrea [Plasmore S.r.l. -Via Grazia Deledda 4, I-21020 Ranco (Vatican City State, Holy See) (Italy)

    2014-10-21

    Plasmonics has recently received considerable interest due to its potentiality in many fields as well as in nanobio-technology applications. In this regard, various strategies are required for modifying the surfaces of plasmonic nanostructures and to control their optical properties in view of interesting application such as bio-sensing, We report a simple method for depositing silica layers of controlled thickness on planar plasmonic structures. Tetraethoxysilane (TEOS) was used as silica precursor. The control of the silica layer thickness was obtained by optimizing the sol-gel method and dip-coating technique, in particular by properly tuning different parameters such as pH, solvent concentration, and withdrawal speed. The resulting films were characterized via atomic force microscopy (AFM), Fourier-transform (FT) spectroscopy, and spectroscopic ellipsometry (SE). Furthermore, by performing the analysis of surface plasmon resonances before and after the coating of the nanostructures, it was observed that the position of the resonance structures could be properly shifted by finely controlling the silica layer thickness. The effect of silica coating was assessed also in view of sensing applications, due to important advantages, such as surface protection of the plasmonic structure.

  15. Surface plasmon microscopy with low-cost metallic nanostructures for biosensing I

    Science.gov (United States)

    Lindquist, Nathan; Oh, Sang-Hyun; Otto, Lauren

    2012-02-01

    The field of plasmonics aims to manipulate light over dimensions smaller than the optical wavelength by exploiting surface plasmon resonances in metallic films. Typically, surface plasmons are excited by illuminating metallic nanostructures. For meaningful research in this exciting area, the fabrication of high-quality nanostructures is critical, and in an undergraduate setting, low-cost methods are desirable. Careful optical characterization of the metallic nanostructures is also required. Here, we present the use of novel, inexpensive nanofabrication techniques and the development of a customized surface plasmon microscopy setup for interdisciplinary undergraduate experiments in biosensing, surface-enhanced Raman spectroscopy, and surface plasmon imaging. A Bethel undergraduate student performs the nanofabrication in collaboration with the University of Minnesota. The rewards of mentoring undergraduate students in cooperation with a large research university are numerous, exposing them to a wide variety of opportunities. This research also interacts with upper-level, open-ended laboratory projects, summer research, a semester-long senior research experience, and will enable a large range of experiments into the future.

  16. Optimization of gold nanoring arrays for biosensing in the fiber-optic communication window

    International Nuclear Information System (INIS)

    Jiang, Hao; Sabarinathan, Jayshri; Li, Tingjie; Yang, Jun; Mittler, Silvia

    2013-01-01

    To improve the limit of detection in a nanoplasmonic sensor system, the optical performance of the metal nanostructures should be optimized according to the best spectral window of the measurement instrument. We propose that the spectral window from 1460 to 1610 nm can potentially provide ultrahigh instrumental resolution for biosensing. We optimized gold nanoring arrays such that the extinction peak position is inside the proposed window, the extinction peak is sharp enough to track the peak shift with high resolution and the figure of merit (sensitivity/linewidth) of the array is optimized at the same time. The peak-sharpening effect of the array caused by coherent interaction plays a central role in the optimization. The optimized array has a lattice constant in the range [1000 nm,1060 nm], a bulk index sensitivity of around 450 nm/RIU and a figure of merit larger than 4. It is an enabling sensor element for a near-infrared sensor chip with ultrahigh resolution. (paper)

  17. Single Mode SU8 Polymer Based Mach-Zehnder Interferometer for Bio-Sensing Application

    Science.gov (United States)

    Boiragi, Indrajit; Kundu, Sushanta; Makkar, Roshan; Chalapathi, Krishnamurthy

    2011-10-01

    This paper explains the influence of different parameters to the sensitivity of an optical waveguide Mach-Zehnder Interferometer (MZI) for real time detection of biomolecules. The sensing principle is based on the interaction of evanescence field with the biomolecules that get immobilized on sensing arm. The sensitivity has been calculated by varying the sensing window length, wavelength and concentration of bio-analyte. The maximum attainable sensitivity for the preferred design is the order of 10-8 RIU at 840 nm wavelength with a sensing window length of 1cm. All the simulation work has been carried out with Opti-BPMCAD for the optimization of MZI device parameters. The SU8 polymers are used as a core and clad material to fabricate the waveguide. The refractive index of cladding layer is optimized by varying the curing temperature for a fixed time period and the achieved index difference between core and clad is Δn = 0.0151. The fabricated MZI device has been characterized with LASER beam profiler at 840 nm wavelength. This study demonstrates the effectiveness of the different parameter to the sensitivity of a single mode optical waveguide Mach-Zehnder Interferometer for bio-sensing application.

  18. Immobilization of biomolecules on cysteamine-modified polyaniline film for highly sensitive biosensing.

    Science.gov (United States)

    Cai, Qi; Xu, Baojian; Ye, Lin; Di, Zengfeng; Zhang, Jishen; Jin, Qinghui; Zhao, Jianlong; Xue, Jian; Chen, Xianfeng

    2014-03-01

    We present a new cysteamine (CS)-modified polyaniline (PANI) film for highly efficient immobilization of biomolecules in biosensing technology. This electrochemical deposited PANI film treated with CS and glutaraldehyde could be employed as an excellent substrate for biomolecules immobilization. The parameters of PANI growth were optimized to obtain suitable surface morphology of films for biomolecules combination with the help of electron and atomic force microscopy. Cyclic voltammetry (CV) was utilized to illustrate the different electrochemical activities of each modified electrode. Due to the existence of sulfydryl group and amino group in CS, surface modification with CS was proven to reduce oxidized units on PANI film remarkably, as evidenced by both ATR-FTIR and Raman spectroscopy characterizations. Furthermore, bovine serum albumin (BSA) was used as the model protein to investigate the immobilization efficiency of biomolecules on the PANI film, comparative study using quartz crystal microbalance (QCM) showed that BSA immobilized on CS-modified PANI could be increased by at least 20% than that without CS-modified PANI in BSA solution with the concentration of 0.1-1mg/mL. The CS-modified PANI film would be significant for the immobilization and detection of biomolecules and especially promising in the application of immunosensor for ultrasensitive detection. © 2013 Published by Elsevier B.V.

  19. Fabrication of polyaniline/carboxymethyl cellulose/cellulose nanofibrous mats and their biosensing application

    International Nuclear Information System (INIS)

    Fu, Jiapeng; Pang, Zengyuan; Yang, Jie; Huang, Fenglin; Cai, Yibing; Wei, Qufu

    2015-01-01

    Graphical abstract: - Highlights: • PANI nanorods have been grown onto the surface of CMC/cellulose nanofibers for the fabrication of biosensor substrate material. • The proposed laccase biosensor exhibited a low detection limit and high sensitivity in the detection of catechol. • Hierarchical PANI/CMC/cellulose nanofibers are the promising material in the design of high-efficient biosensors. - Abstract: We report a facile approach to synthesizing and immobilizing polyaniline nanorods onto carboxymethyl cellulose (CMC)-modified cellulose nanofibers for their biosensing application. Firstly, the hierarchical PANI/CMC/cellulose nanofibers were fabricated by in situ polymerization of aniline on the CMC-modified cellulose nanofiber. Subsequently, the PANI/CMC/cellulose nanofibrous mat modified with laccase (Lac) was used as biosensor substrate material for the detection of catechol. PANI/CMC/cellulose nanofibers with highly conductive and three dimensional nanostructure were characterized by scanning electron microscopy (SEM), transmission electron microscope (TEM), Fourier transform infrared spectra (FT-IR), cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS). Under optimum conditions, the Lac/PANI/CMC/cellulose/glassy carbon electrode (GCE) exhibited a fast response time (within 8 s), a linear response range from 0.497 μM to 2.27 mM with a high sensitivity and low detection limit of 0.374 μM (3σ). The developed biosensor also displayed good repeatability, reproducibility as well as selectivity. The results indicated that the composite mat has potential application in enzyme biosensors

  20. Hybridization chain reaction: a versatile molecular tool for biosensing, bioimaging, and biomedicine.

    Science.gov (United States)

    Bi, Sai; Yue, Shuzhen; Zhang, Shusheng

    2017-07-17

    Developing powerful, simple and low-cost DNA amplification techniques is of great significance to bioanalysis and biomedical research. Thus far, many signal amplification strategies have been developed, such as polymerase chain reaction (PCR), rolling circle amplification (RCA), and DNA strand displacement amplification (SDA). In particular, hybridization chain reaction (HCR), a type of toehold-mediated strand displacement (TMSD) reaction, has attracted great interest because of its enzyme-free nature, isothermal conditions, simple protocols, and excellent amplification efficiency. In a typical HCR, an analyte initiates the cross-opening of two DNA hairpins, yielding nicked double helices that are analogous to alternating copolymers. As an efficient amplification platform, HCR has been utilized for the sensitive detection of a wide variety of analytes, including nucleic acids, proteins, small molecules, and cells. In recent years, more complicated sets of monomers have been designed to develop nonlinear HCR, such as branched HCR and even dendritic systems, achieving quadratic and exponential growth mechanisms. In addition, HCR has attracted enormous attention in the fields of bioimaging and biomedicine, including applications in fluorescence in situ hybridization (FISH) imaging, live cell imaging, and targeted drug delivery. In this review, we introduce the fundamentals of HCR and examine the visualization and analysis techniques for HCR products in detail. The most recent HCR developments in biosensing, bioimaging, and biomedicine are subsequently discussed with selected examples. Finally, the review provides insight into the challenges and future perspectives of HCR.

  1. Plasmonic bio-sensing for the Fenna-Matthews-Olson complex

    Science.gov (United States)

    Chen, Guang-Yin; Lambert, Neill; Shih, Yen-An; Liu, Meng-Han; Chen, Yueh-Nan; Nori, Franco

    2017-01-01

    We study theoretically the bio-sensing capabilities of metal nanowire surface plasmons. As a specific example, we couple the nanowire to specific sites (bacteriochlorophyll) of the Fenna-Matthews-Olson (FMO) photosynthetic pigment protein complex. In this hybrid system, we find that when certain sites of the FMO complex are subject to either the suppression of inter-site transitions or are entirely disconnected from the complex, the resulting variations in the excitation transfer rates through the complex can be monitored through the corresponding changes in the scattering spectra of the incident nanowire surface plasmons. We also find that these changes can be further enhanced by changing the ratio of plasmon-site couplings. The change of the Fano lineshape in the scattering spectra further reveals that “site 5” in the FMO complex plays a distinct role from other sites. Our results provide a feasible way, using single photons, to detect mutation-induced, or bleaching-induced, local defects or modifications of the FMO complex, and allows access to both the local and global properties of the excitation transfer in such systems.

  2. OLED-based biosensing platform with ZnO nanoparticles for enzyme immobilization

    Science.gov (United States)

    Cai, Yuankun; Shinar, Ruth; Shinar, Joseph

    2009-08-01

    Organic light-emitting diode (OLED)-based sensing platforms are attractive for photoluminescence (PL)-based monitoring of a variety of analytes. Among the promising OLED attributes for sensing applications is the thin and flexible size and design of the OLED pixel array that is used for PL excitation. To generate a compact, fielddeployable sensor, other major sensor components, such as the sensing probe and the photodetector, in addition to the thin excitation source, should be compact. To this end, the OLED-based sensing platform was tested with composite thin biosensing films, where oxidase enzymes were immobilized on ZnO nanoparticles, rather than dissolved in solution, to generate a more compact device. The analytes tested, glucose, cholesterol, and lactate, were monitored by following their oxidation reactions in the presence of oxygen and their respective oxidase enzymes. During such reactions, oxygen is consumed and its residual concentration, which is determined by the initial concentration of the above-mentioned analytes, is monitored. The sensors utilized the oxygen-sensitive dye Pt octaethylporphyrin, embedded in polystyrene. The enzymes were sandwiched between two thin ZnO layers, an approach that was found to improve the stability of the sensing probes.

  3. Electronic desalting for controlling the ionic environment in droplet-based biosensing platforms

    Energy Technology Data Exchange (ETDEWEB)

    Swaminathan, Vikhram Vilasur [Department of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Dak, Piyush; Alam, Muhammad A., E-mail: rbashir@illinois.edu, E-mail: alam@purdue.edu [School of Electrical and Computer Engineering, Purdue University, West Lafayette, Indiana 47907 (United States); Reddy, Bobby; Duarte-Guevara, Carlos; Zhong, Yu [Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Salm, Eric [Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Fischer, Andrew [Abbott Laboratories, 1921 Hurd Drive, Dept. 8482 LC2 M/S 2-33, Irving, Texas 75038 (United States); Liu, Yi-Shao [Taiwan Semiconductor Manufacturing Company, Hsinchu 300-78, Taiwan (China); Bashir, Rashid, E-mail: rbashir@illinois.edu, E-mail: alam@purdue.edu [Department of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States)

    2015-02-02

    The ability to control the ionic environment in saline waters and aqueous electrolytes is useful for desalination as well as electronic biosensing. We demonstrate a method of electronic desalting at micro-scale through on-chip micro electrodes. We show that, while desalting is limited in bulk solutions with unlimited availability of salts, significant desalting of ≥1 mM solutions can be achieved in sub-nanoliter volume droplets with diameters of ∼250 μm. Within these droplets, by using platinum-black microelectrodes and electrochemical surface treatments, we can enhance the electrode surface area to achieve >99% and 41% salt removal in 1 mM and 10 mM salt concentrations, respectively. Through self-consistent simulations and experimental measurements, we demonstrate that conventional double-layer theory over-predicts the desalting capacity and, hence, cannot be used to model systems that are mass limited or undergoing significant salt removal from the bulk. Our results will provide a better understanding of capacitive desalination, as well as a method for salt manipulation in high-throughput droplet-based microfluidic sensing platforms.

  4. Fabrication of polyaniline/carboxymethyl cellulose/cellulose nanofibrous mats and their biosensing application

    Energy Technology Data Exchange (ETDEWEB)

    Fu, Jiapeng, E-mail: firgexiao@sina.cn; Pang, Zengyuan, E-mail: pangzengyuan1212@163.com; Yang, Jie, E-mail: young1993@126.com; Huang, Fenglin, E-mail: flhuang@jiangnan.edu.cn; Cai, Yibing, E-mail: yibingcai@jiangnan.edu.cn; Wei, Qufu, E-mail: qfwei@jiangnan.edu.cn

    2015-09-15

    Graphical abstract: - Highlights: • PANI nanorods have been grown onto the surface of CMC/cellulose nanofibers for the fabrication of biosensor substrate material. • The proposed laccase biosensor exhibited a low detection limit and high sensitivity in the detection of catechol. • Hierarchical PANI/CMC/cellulose nanofibers are the promising material in the design of high-efficient biosensors. - Abstract: We report a facile approach to synthesizing and immobilizing polyaniline nanorods onto carboxymethyl cellulose (CMC)-modified cellulose nanofibers for their biosensing application. Firstly, the hierarchical PANI/CMC/cellulose nanofibers were fabricated by in situ polymerization of aniline on the CMC-modified cellulose nanofiber. Subsequently, the PANI/CMC/cellulose nanofibrous mat modified with laccase (Lac) was used as biosensor substrate material for the detection of catechol. PANI/CMC/cellulose nanofibers with highly conductive and three dimensional nanostructure were characterized by scanning electron microscopy (SEM), transmission electron microscope (TEM), Fourier transform infrared spectra (FT-IR), cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS). Under optimum conditions, the Lac/PANI/CMC/cellulose/glassy carbon electrode (GCE) exhibited a fast response time (within 8 s), a linear response range from 0.497 μM to 2.27 mM with a high sensitivity and low detection limit of 0.374 μM (3σ). The developed biosensor also displayed good repeatability, reproducibility as well as selectivity. The results indicated that the composite mat has potential application in enzyme biosensors.

  5. Biosensing based on magnetically induced self-assembly of particles in magnetic colloids.

    Science.gov (United States)

    Yang, Ye; Morimoto, Yoshitaka; Takamura, Tsukasa; Sandhu, Adarsh

    2012-03-01

    Superparamagnetic beads and nonmagnetic beads of different sizes were assembled to form a "ring-structure" in a magnetorheological (MR) fluid solution by the application of external magnetic fields. For superparamagnetic beads and non-magnetic beads functionalized with probe and target molecules, respectively, the ring-structure was maintained even after removing the external magnetic field due to biomolecular bonding. Several experiments are described, including the formation process of ring-structures with and without molecular interactions, the accelerating effect of external magnetic fields, and the effect of biotin concentration on the structures of the rings. We define the small nonmagnetic particles as "petals" because the whole structure looks like a flower. The number of remnant ring petals was a function of the concentration of target molecules in the concentration range of 0.0768 ng/ml-3.8419 ng/ml which makes this protocol a promising method for biosensing. Not only was the formation process rapid, but the resulting two-dimensional colloidal system also offers a simple method for reducing reagent consumption and waste generation.

  6. In situ biosensing of the nanomechanical property and electrochemical spectroscopy of Streptococcus mutans-containing biofilms

    International Nuclear Information System (INIS)

    Liu, Bernard Haochih; Li, Kun-Lin; Kang, Kai-Li; Huang, Wen-Ke; Liao, Jiunn-Der

    2013-01-01

    This work presents in situ biosensing approaches to study the nanomechanical and electrochemical behaviour of Streptococcus mutans biofilms under different cultivation conditions and microenvironments. The surface characteristics and sub-surface electrochemistry of the cell wall of S. mutans were measured by atomic force microscopy (AFM) based techniques to monitor the in situ biophysical status of biofilms under common anti-pathogenic procedures such as ultraviolet (UV) radiation and alcohol treatment. The AFM nanoindentation suggested a positive correlation between nanomechanical strength and the level of UV radiation of S. mutans; scanning impedance spectroscopy of dehydrated biofilms revealed reduced electrical resistance that is distinctive from that of living biofilms, which can be explained by the discharge of cytoplasm after alcohol treatment. Furthermore, the localized elastic moduli of four regions of the biofilm were studied: septum (Z-ring), cell wall, the interconnecting area between two cells and extracellular polymeric substance (EPS) area. The results indicated that cell walls exhibit the highest elastic modulus, followed by Z-ring, interconnect and EPS. Our approach provides an effective alternative for the characterization of the viability of living cells without the use of biochemical labelling tools such as fluorescence dyeing, and does not rely on surface binding or immobilization for detection. These AFM-based techniques can be very promising approaches when the conventional methods fall short. (paper)

  7. Ultrasmooth metallic films with buried nanostructures for backside reflection-mode plasmonic biosensing

    Energy Technology Data Exchange (ETDEWEB)

    Lindquist, N.C.; Johnson, T.W.; Jose, J.; Otto, L.M. [Laboratory of Nanostructures and Biosensing, Department of Electrical and Computer Engineering, University of Minnesota, Minneapolis, MN 55455 (United States); Oh, S.H. [Laboratory of Nanostructures and Biosensing, Department of Electrical and Computer Engineering, University of Minnesota, Minneapolis, MN 55455 (United States); Department of Biophysics and Chemical Biology, Seoul National University, Seoul, 151-747 (Korea, Republic of)

    2012-11-15

    A new plasmonic device architecture based on ultrasmooth metallic surfaces with buried plasmonic nanostructures is presented. Using template-stripping techniques, ultrathin gold films with less than 5 Aa surface roughness are optically coupled to an arbitrary arrangement of buried metallic gratings, rings, and nanodots. As a prototypical example, linear plasmonic gratings buried under an ultrasmooth 20 nm thick gold surface for biosensing are presented. The optical illumination and collection are completely decoupled from the microfluidic delivery of liquid samples due to the backside, reflection-mode geometry. This allows for sensing with opaque or highly scattering liquids. With the buried nanostructure design, high sensitivity and decoupled backside (reflective) optical access are maintained, as with traditional prism-based surface plasmon resonance (SPR) sensors. In addition, the benefits offered by nanoplasmonic sensors such as spectral tunability and high-resolution, wide-field SPR imaging with normal-incidence epi-illumination that is simple to construct and align are gained as well. Beyond sensing, the buried plasmonic nanostructures with ultrasmooth metallic surfaces can benefit nanophotonic waveguides, surface-enhanced spectroscopy, nanolithography, and optical trapping. (Copyright copyright 2012 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim)

  8. Synthesis and characterization of MgO nanocrystals for biosensing applications

    Energy Technology Data Exchange (ETDEWEB)

    Li, Hongji [Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering, Tianjin University of Technology, Tianjin 300384 (China); Li, Mingji, E-mail: limingji@163.com [Tianjin Key Laboratory of Film Electronic and Communication Devices, School of Electronics Information Engineering, Tianjin University of Technology, Tianjin 300384 (China); Qiu, Guojun [Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering, Tianjin University of Technology, Tianjin 300384 (China); Li, Cuiping; Qu, Changqing; Yang, Baohe [Tianjin Key Laboratory of Film Electronic and Communication Devices, School of Electronics Information Engineering, Tianjin University of Technology, Tianjin 300384 (China)

    2015-05-25

    Highlights: • MgO nanocrystals were prepared using DC arc plasma jet CVD method. • The growth time does not exceed 10 min in process of the synthesis. • The samples were found to consist of cubic MgO nanobelts and nanosheets. • Nanocrystals contain contacts, rough edges, vacancies, and doping defects. • The samples exhibited excellent electrochemical biosensing properties. - Abstract: MgO nanocrystals were prepared using a simple direct current arc plasma jet chemical vapor deposition method. Magnesium nitrate was used as source material and Mo film was used as a substrate and catalyst. The high-temperature plasma produced ensured rapid synthesis of the MgO nanocrystals. The as-prepared nanocrystals were characterized by field-emission scanning electron microscopy, high-resolution transmission electron microscopy, X-ray diffraction, energy-dispersive spectroscopy, Fourier transform infrared spectrometry, ultraviolet–visible spectrophotometry, and photoluminescence measurements. The as-synthesized samples were found to consist of cubic MgO nanobelts and nanosheets with large surface areas and low coordination oxide ions, and contained numerous contacts, rough edges, vacancies, and doping defects. The nanostructures exhibited excellent electrochemical sensing properties with high-sensing sensitivity toward ascorbic acid. Their high electrocatalytic activity was attributed to the effect of defects and the surface electron transfer ability of the one-dimensional MgO nanobelts.

  9. Multispectral Image Road Extraction Based Upon Automated Map Conflation

    Science.gov (United States)

    Chen, Bin

    Road network extraction from remotely sensed imagery enables many important and diverse applications such as vehicle tracking, drone navigation, and intelligent transportation studies. There are, however, a number of challenges to road detection from an image. Road pavement material, width, direction, and topology vary across a scene. Complete or partial occlusions caused by nearby buildings, trees, and the shadows cast by them, make maintaining road connectivity difficult. The problems posed by occlusions are exacerbated with the increasing use of oblique imagery from aerial and satellite platforms. Further, common objects such as rooftops and parking lots are made of materials similar or identical to road pavements. This problem of common materials is a classic case of a single land cover material existing for different land use scenarios. This work addresses these problems in road extraction from geo-referenced imagery by leveraging the OpenStreetMap digital road map to guide image-based road extraction. The crowd-sourced cartography has the advantages of worldwide coverage that is constantly updated. The derived road vectors follow only roads and so can serve to guide image-based road extraction with minimal confusion from occlusions and changes in road material. On the other hand, the vector road map has no information on road widths and misalignments between the vector map and the geo-referenced image are small but nonsystematic. Properly correcting misalignment between two geospatial datasets, also known as map conflation, is an essential step. A generic framework requiring minimal human intervention is described for multispectral image road extraction and automatic road map conflation. The approach relies on the road feature generation of a binary mask and a corresponding curvilinear image. A method for generating the binary road mask from the image by applying a spectral measure is presented. The spectral measure, called anisotropy-tunable distance (ATD

  10. Multispectral and Panchromatic used Enhancement Resolution and Study Effective Enhancement on Supervised and Unsupervised Classification Land – Cover

    Science.gov (United States)

    Salman, S. S.; Abbas, W. A.

    2018-05-01

    The goal of the study is to support analysis Enhancement of Resolution and study effect on classification methods on bands spectral information of specific and quantitative approaches. In this study introduce a method to enhancement resolution Landsat 8 of combining the bands spectral of 30 meters resolution with panchromatic band 8 of 15 meters resolution, because of importance multispectral imagery to extracting land - cover. Classification methods used in this study to classify several lands -covers recorded from OLI- 8 imagery. Two methods of Data mining can be classified as either supervised or unsupervised. In supervised methods, there is a particular predefined target, that means the algorithm learn which values of the target are associated with which values of the predictor sample. K-nearest neighbors and maximum likelihood algorithms examine in this work as supervised methods. In other hand, no sample identified as target in unsupervised methods, the algorithm of data extraction searches for structure and patterns between all the variables, represented by Fuzzy C-mean clustering method as one of the unsupervised methods, NDVI vegetation index used to compare the results of classification method, the percent of dense vegetation in maximum likelihood method give a best results.

  11. Multispectral UV imaging for surface analysis of MUPS tablets with special focus on the pellet distribution

    DEFF Research Database (Denmark)

    Novikova, Anna; Carstensen, Jens Michael; Rades, Thomas

    2016-01-01

    In the present study the applicability of multispectral UV imaging in combination with multivariate image analysis for surface evaluation of MUPS tablets was investigated with respect to the differentiation of the API pellets from the excipients matrix, estimation of the drug content as well as p...... image analysis is a promising approach for the automatic quality control of MUPS tablets during the manufacturing process....

  12. Multispectral Image Compression Based on DSC Combined with CCSDS-IDC

    Directory of Open Access Journals (Sweden)

    Jin Li

    2014-01-01

    Full Text Available Remote sensing multispectral image compression encoder requires low complexity, high robust, and high performance because it usually works on the satellite where the resources, such as power, memory, and processing capacity, are limited. For multispectral images, the compression algorithms based on 3D transform (like 3D DWT, 3D DCT are too complex to be implemented in space mission. In this paper, we proposed a compression algorithm based on distributed source coding (DSC combined with image data compression (IDC approach recommended by CCSDS for multispectral images, which has low complexity, high robust, and high performance. First, each band is sparsely represented by DWT to obtain wavelet coefficients. Then, the wavelet coefficients are encoded by bit plane encoder (BPE. Finally, the BPE is merged to the DSC strategy of Slepian-Wolf (SW based on QC-LDPC by deep coupling way to remove the residual redundancy between the adjacent bands. A series of multispectral images is used to test our algorithm. Experimental results show that the proposed DSC combined with the CCSDS-IDC (DSC-CCSDS-based algorithm has better compression performance than the traditional compression approaches.

  13. Multispectral televisional measuring control of the ecological state of waterbodies on the characteristics macrophytes

    Science.gov (United States)

    Petruk, Vasil; Kvaternyuk, Sergii; Kozachuk, Anastasia; Sailarbek, Saltanat; Gromaszek, Konrad

    2015-12-01

    Improved methods for multispectral measuring television monitoring of the ecological state of water bodies on the characteristics of macrophytes groups to assess complex human impact on their environment. Integral assessment of water pollution is based on research products of higher aquatic plants and their communities by optical methods.

  14. Spectral correction algorithm for multispectral CdTe x-ray detectors

    DEFF Research Database (Denmark)

    Christensen, Erik D.; Kehres, Jan; Gu, Yun

    2017-01-01

    Compared to the dual energy scintillator detectors widely used today, pixelated multispectral X-ray detectors show the potential to improve material identification in various radiography and tomography applications used for industrial and security purposes. However, detector effects, such as charge...

  15. Multispectral x-ray CT: multivariate statistical analysis for efficient reconstruction

    DEFF Research Database (Denmark)

    Kheirabadi, Mina; Mustafa, Wail; Lyksborg, Mark

    2017-01-01

    Recent developments in multispectral X-ray detectors allow for an efficient identification of materials based on their chemical composition. This has a range of applications including security inspection, which is our motivation. In this paper, we analyze data from a tomographic setup employing...

  16. Off-Resonance Suppression for Multispectral MR Imaging Near Metallic Implants

    NARCIS (Netherlands)

    den Harder, J. Chiel; van Yperen, Gert H.; Blume, Ulrike A.; Bos, Clemens

    Purpose: Metal artifact reduction in MRI within clinically feasible scan-times without through-plane aliasing. Theory and Methods: Existing metal artifact reduction techniques include view angle tilting (VAT), which resolves in-plane distortions, and multispectral imaging (MSI) techniques, such as

  17. A multispectral scanner survey of the Tonopah Test Range, Nevada. Date of survey: August 1993

    International Nuclear Information System (INIS)

    Brewster, S.B. Jr.; Howard, M.E.; Shines, J.E.

    1994-08-01

    The Multispectral Remote Sensing Department of the Remote Sensing Laboratory conducted an airborne multispectral scanner survey of a portion of the Tonopah Test Range, Nevada. The survey was conducted on August 21 and 22, 1993, using a Daedalus AADS1268 scanner and coincident aerial color photography. Flight altitudes were 5,000 feet (1,524 meters) above ground level for systematic coverage and 1,000 feet (304 meters) for selected areas of special interest. The multispectral scanner survey was initiated as part of an interim and limited investigation conducted to gather preliminary information regarding historical hazardous material release sites which could have environmental impacts. The overall investigation also includes an inventory of environmental restoration sites, a ground-based geophysical survey, and an aerial radiological survey. The multispectral scanner imagery and coincident aerial photography were analyzed for the detection, identification, and mapping of man-made soil disturbances. Several standard image enhancement techniques were applied to the data to assist image interpretation. A geologic ratio enhancement and a color composite consisting of AADS1268 channels 10, 7, and 9 (mid-infrared, red, and near-infrared spectral bands) proved most useful for detecting soil disturbances. A total of 358 disturbance sites were identified on the imagery and mapped using a geographic information system. Of these sites, 326 were located within the Tonopah Test Range while the remaining sites were present on the imagery but outside the site boundary. The mapped site locations are being used to support ongoing field investigations

  18. Multispectral image compression based on DSC combined with CCSDS-IDC.

    Science.gov (United States)

    Li, Jin; Xing, Fei; Sun, Ting; You, Zheng

    2014-01-01

    Remote sensing multispectral image compression encoder requires low complexity, high robust, and high performance because it usually works on the satellite where the resources, such as power, memory, and processing capacity, are limited. For multispectral images, the compression algorithms based on 3D transform (like 3D DWT, 3D DCT) are too complex to be implemented in space mission. In this paper, we proposed a compression algorithm based on distributed source coding (DSC) combined with image data compression (IDC) approach recommended by CCSDS for multispectral images, which has low complexity, high robust, and high performance. First, each band is sparsely represented by DWT to obtain wavelet coefficients. Then, the wavelet coefficients are encoded by bit plane encoder (BPE). Finally, the BPE is merged to the DSC strategy of Slepian-Wolf (SW) based on QC-LDPC by deep coupling way to remove the residual redundancy between the adjacent bands. A series of multispectral images is used to test our algorithm. Experimental results show that the proposed DSC combined with the CCSDS-IDC (DSC-CCSDS)-based algorithm has better compression performance than the traditional compression approaches.

  19. The method of multispectral image processing of phytoplankton processing for environmental control of water pollution

    Science.gov (United States)

    Petruk, Vasil; Kvaternyuk, Sergii; Yasynska, Victoria; Kozachuk, Anastasia; Kotyra, Andrzej; Romaniuk, Ryszard S.; Askarova, Nursanat

    2015-12-01

    The paper presents improvement of the method of environmental monitoring of water bodies based on bioindication by phytoplankton, which identify phytoplankton particles carried out on the basis of comparison array multispectral images using Bayesian classifier of solving function based on Mahalanobis distance. It allows to evaluate objectively complex anthropogenic and technological impacts on aquatic ecosystems.

  20. Red to far-red multispectral fluorescence image fusion for detection of fecal contamination on apples

    Science.gov (United States)

    This research developed a multispectral algorithm derived from hyperspectral line-scan fluorescence imaging under violet/blue LED excitation for detection of fecal contamination on Golden Delicious apples. Using a hyperspectral line-scan imaging system consisting of an EMCCD camera, spectrograph, an...

  1. Multispectral fluorescence image algorithms for detection of frass on mature tomatoes

    Science.gov (United States)

    A multispectral algorithm derived from hyperspectral line-scan fluorescence imaging under violet LED excitation was developed for the detection of frass contamination on mature tomatoes. The algorithm utilized the fluorescence intensities at five wavebands, 515 nm, 640 nm, 664 nm, 690 nm, and 724 nm...

  2. Multispectral remote sensing of inland wetlands in South Carolina: selecting the appropriate sensor

    International Nuclear Information System (INIS)

    Jensen, J.R.; Hodgson, M.; Christensen, E.J.; Mackey, H.E.; Sharitz, R.R.

    1984-01-01

    This research summarizes the utility of remote sensing for mapping both local (SRP) and regional wetlands including: stream delta areas, using aircraft multispectral scanner (MSS) imagery and large scale aerial photography; the SRP river swamp, using aircraft MSS and LANDSAT thematic mapper imagery; the Savannah River watershed, using LANDSAT MSS Imagery

  3. Distant Determination of Bilirubin Distribution in Skin by Multi-Spectral Imaging

    Science.gov (United States)

    Saknite, I.; Jakovels, D.; Spigulis, J.

    2011-01-01

    For mapping the bilirubin distribution in bruised skin the multi-spectral imaging technique was employed, which made it possible to observe temporal changes of the bilirubin content in skin photo-types II and III. The obtained results confirm the clinical potential of this technique for skin bilirubin diagnostics.

  4. Employing airborne multispectral digital imagery to map Brazilian pepper infestation in south Texas.

    Science.gov (United States)

    A study was conducted in south Texas to determine the feasibility of using airborne multispectral digital imagery for differentiating the invasive plant Brazilian pepper (Schinus terebinthifolius) from other cover types. Imagery obtained in the visible, near infrared, and mid infrared regions of th...

  5. An image compression method for space multispectral time delay and integration charge coupled device camera

    International Nuclear Information System (INIS)

    Li Jin; Jin Long-Xu; Zhang Ran-Feng

    2013-01-01

    Multispectral time delay and integration charge coupled device (TDICCD) image compression requires a low-complexity encoder because it is usually completed on board where the energy and memory are limited. The Consultative Committee for Space Data Systems (CCSDS) has proposed an image data compression (CCSDS-IDC) algorithm which is so far most widely implemented in hardware. However, it cannot reduce spectral redundancy in multispectral images. In this paper, we propose a low-complexity improved CCSDS-IDC (ICCSDS-IDC)-based distributed source coding (DSC) scheme for multispectral TDICCD image consisting of a few bands. Our scheme is based on an ICCSDS-IDC approach that uses a bit plane extractor to parse the differences in the original image and its wavelet transformed coefficient. The output of bit plane extractor will be encoded by a first order entropy coder. Low-density parity-check-based Slepian—Wolf (SW) coder is adopted to implement the DSC strategy. Experimental results on space multispectral TDICCD images show that the proposed scheme significantly outperforms the CCSDS-IDC-based coder in each band

  6. Multispectral medical image fusion in Contourlet domain for computer based diagnosis of Alzheimer’s disease

    International Nuclear Information System (INIS)

    Bhateja, Vikrant; Moin, Aisha; Srivastava, Anuja; Bao, Le Nguyen; Lay-Ekuakille, Aimé; Le, Dac-Nhuong

    2016-01-01

    Computer based diagnosis of Alzheimer’s disease can be performed by dint of the analysis of the functional and structural changes in the brain. Multispectral image fusion deliberates upon fusion of the complementary information while discarding the surplus information to achieve a solitary image which encloses both spatial and spectral details. This paper presents a Non-Sub-sampled Contourlet Transform (NSCT) based multispectral image fusion model for computer-aided diagnosis of Alzheimer’s disease. The proposed fusion methodology involves color transformation of the input multispectral image. The multispectral image in YIQ color space is decomposed using NSCT followed by dimensionality reduction using modified Principal Component Analysis algorithm on the low frequency coefficients. Further, the high frequency coefficients are enhanced using non-linear enhancement function. Two different fusion rules are then applied to the low-pass and high-pass sub-bands: Phase congruency is applied to low frequency coefficients and a combination of directive contrast and normalized Shannon entropy is applied to high frequency coefficients. The superiority of the fusion response is depicted by the comparisons made with the other state-of-the-art fusion approaches (in terms of various fusion metrics).

  7. A workflow for extracting plot-level biophysical indicators from aerially acquired multispectral imagery

    Science.gov (United States)

    Advances in technologies associated with unmanned aerial vehicles (UAVs) has allowed for researchers, farmers and agribusinesses to incorporate UAVs coupled with various imaging systems into data collection activities and aid expert systems for making decisions. Multispectral imageries allow for a q...

  8. Airborne multispectral identification of individual cotton plants using consumer-grade cameras

    Science.gov (United States)

    Although multispectral remote sensing using consumer-grade cameras has successfully identified fields of small cotton plants, improvements to detection sensitivity are needed to identify individual or small clusters of plants. The imaging sensor of consumer-grade cameras are based on a Bayer patter...

  9. Multispectral medical image fusion in Contourlet domain for computer based diagnosis of Alzheimer’s disease

    Energy Technology Data Exchange (ETDEWEB)

    Bhateja, Vikrant, E-mail: bhateja.vikrant@gmail.com, E-mail: nhuongld@hus.edu.vn; Moin, Aisha; Srivastava, Anuja [Shri Ramswaroop Memorial Group of Professional Colleges (SRMGPC), Lucknow, Uttar Pradesh 226028 (India); Bao, Le Nguyen [Duytan University, Danang 550000 (Viet Nam); Lay-Ekuakille, Aimé [Department of Innovation Engineering, University of Salento, Lecce 73100 (Italy); Le, Dac-Nhuong, E-mail: bhateja.vikrant@gmail.com, E-mail: nhuongld@hus.edu.vn [Duytan University, Danang 550000 (Viet Nam); Haiphong University, Haiphong 180000 (Viet Nam)

    2016-07-15

    Computer based diagnosis of Alzheimer’s disease can be performed by dint of the analysis of the functional and structural changes in the brain. Multispectral image fusion deliberates upon fusion of the complementary information while discarding the surplus information to achieve a solitary image which encloses both spatial and spectral details. This paper presents a Non-Sub-sampled Contourlet Transform (NSCT) based multispectral image fusion model for computer-aided diagnosis of Alzheimer’s disease. The proposed fusion methodology involves color transformation of the input multispectral image. The multispectral image in YIQ color space is decomposed using NSCT followed by dimensionality reduction using modified Principal Component Analysis algorithm on the low frequency coefficients. Further, the high frequency coefficients are enhanced using non-linear enhancement function. Two different fusion rules are then applied to the low-pass and high-pass sub-bands: Phase congruency is applied to low frequency coefficients and a combination of directive contrast and normalized Shannon entropy is applied to high frequency coefficients. The superiority of the fusion response is depicted by the comparisons made with the other state-of-the-art fusion approaches (in terms of various fusion metrics).

  10. Application of multispectral imaging to determine quality attributes and ripeness stage in strawberry fruit.

    Directory of Open Access Journals (Sweden)

    Changhong Liu

    Full Text Available Multispectral imaging with 19 wavelengths in the range of 405-970 nm has been evaluated for nondestructive determination of firmness, total soluble solids (TSS content and ripeness stage in strawberry fruit. Several analysis approaches, including partial least squares (PLS, support vector machine (SVM and back propagation neural network (BPNN, were applied to develop theoretical models for predicting the firmness and TSS of intact strawberry fruit. Compared with PLS and SVM, BPNN considerably improved the performance of multispectral imaging for predicting firmness and total soluble solids content with the correlation coefficient (r of 0.94 and 0.83, SEP of 0.375 and 0.573, and bias of 0.035 and 0.056, respectively. Subsequently, the ability of multispectral imaging technology to classify fruit based on ripeness stage was tested using SVM and principal component analysis-back propagation neural network (PCA-BPNN models. The higher classification accuracy of 100% was achieved using SVM model. Moreover, the results of all these models demonstrated that the VIS parts of the spectra were the main contributor to the determination of firmness, TSS content estimation and classification of ripeness stage in strawberry fruit. These results suggest that multispectral imaging, together with suitable analysis model, is a promising technology for rapid estimation of quality attributes and classification of ripeness stage in strawberry fruit.

  11. UAV MULTISPECTRAL SURVEY TO MAP SOIL AND CROP FOR PRECISION FARMING APPLICATIONS

    Directory of Open Access Journals (Sweden)

    G. Sona

    2016-06-01

    Full Text Available New sensors mounted on UAV and optimal procedures for survey, data acquisition and analysis are continuously developed and tested for applications in precision farming. Procedures to integrate multispectral aerial data about soil and crop and ground-based proximal geophysical data are a recent research topic aimed to delineate homogeneous zones for the management of agricultural inputs (i.e., water, nutrients. Multispectral and multitemporal orthomosaics were produced over a test field (a 100 m x 200 m plot within a maize field, to map vegetation and soil indices, as well as crop heights, with suitable ground resolution. UAV flights were performed in two moments during the crop season, before sowing on bare soil, and just before flowering when maize was nearly at the maximum height. Two cameras, for color (RGB and false color (NIR-RG images, were used. The images were processed in Agisoft Photoscan to produce Digital Surface Model (DSM of bare soil and crop, and multispectral orthophotos. To overcome some difficulties in the automatic searching of matching points for the block adjustment of the crop image, also the scientific software developed by Politecnico of Milan was used to enhance images orientation. Surveys and image processing are described, as well as results about classification of multispectral-multitemporal orthophotos and soil indices.

  12. A fluorescent biosensing platform based on the polydopamine nanospheres intergrating with Exonuclease III-assisted target recycling amplification.

    Science.gov (United States)

    Qiang, Weibing; Wang, Xi; Li, Wei; Chen, Xiang; Li, Hui; Xu, Danke

    2015-09-15

    Rapid, cost-effective, sensitive and specific analysis of biomolecules is important in the modern healthcare system. Here, a fluorescent biosensing platform based on the polydopamine nanospheres (PDANS) intergrating with Exonuclease III (Exo III) was developed. Due to the interaction between the ssDNA and the PDANS, the fluorescence of 6-carboxyfluorescein (FAM) labelled in the probe would been quenched by PDANS through FRET. While, in the present of the target DNA, the probe DNA would hybridize with the target DNA to form the double-strand DNA complex. Thus, Exo III could catalyze the stepwise removal of mononucleotides from 3'-terminus in the probe DNA, releasing the target DNA. As the FAM was released from the probe DNA, the fluorescence would no longer been quenched, led to the signal on. As one target DNA molecule could undergo a number of cycles to trigger the degradation of abundant probe DNA, Exo III-assisted target recycling would led to the amplification of the signal. The detection limit for DNA was 5 pM, which was 20 times lower than that without Exo III. And the assay time was largely shortened due to the faster signal recovery kinetics. What is more, this target recycling strategy was also applied to conduct an aptamer-based biosensing platform. The fluorescence intensity was also enhanced for the assay of adenosine triphosphate (ATP). For the Exo III-assisted target recycling amplification, DNA and ATP were fast detected with high sensitivity and selectivity. This work provides opportunities to develop simple, rapid, economical, and sensitive biosensing platforms for biomedical diagnostics. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Solid-phase single molecule biosensing using dual-color colocalization of fluorescent quantum dot nanoprobes

    Science.gov (United States)

    Liu, Jianbo; Yang, Xiaohai; Wang, Kemin; Wang, Qing; Liu, Wei; Wang, Dong

    2013-10-01

    The development of solid-phase surface-based single molecule imaging technology has attracted significant interest during the past decades. Here we demonstrate a sandwich hybridization method for highly sensitive detection of a single thrombin protein at a solid-phase surface based on the use of dual-color colocalization of fluorescent quantum dot (QD) nanoprobes. Green QD560-modified thrombin binding aptamer I (QD560-TBA I) were deposited on a positive poly(l-lysine) assembled layer, followed by bovine serum albumin blocking. It allowed the thrombin protein to mediate the binding of the easily detectable red QD650-modified thrombin binding aptamer II (QD650-TBA II) to the QD560-TBA I substrate. Thus, the presence of the target thrombin can be determined based on fluorescent colocalization measurements of the nanoassemblies, without target amplification or probe separation. The detection limit of this assay reached 0.8 pM. This fluorescent colocalization assay has enabled single molecule recognition in a separation-free detection format, and can serve as a sensitive biosensing platform that greatly suppresses the nonspecific adsorption false-positive signal. This method can be extended to other areas such as multiplexed immunoassay, single cell analysis, and real time biomolecule interaction studies.The development of solid-phase surface-based single molecule imaging technology has attracted significant interest during the past decades. Here we demonstrate a sandwich hybridization method for highly sensitive detection of a single thrombin protein at a solid-phase surface based on the use of dual-color colocalization of fluorescent quantum dot (QD) nanoprobes. Green QD560-modified thrombin binding aptamer I (QD560-TBA I) were deposited on a positive poly(l-lysine) assembled layer, followed by bovine serum albumin blocking. It allowed the thrombin protein to mediate the binding of the easily detectable red QD650-modified thrombin binding aptamer II (QD650-TBA II) to

  14. Functional DNA-containing nanomaterials: cellular applications in biosensing, imaging, and targeted therapy.

    Science.gov (United States)

    Liang, Hao; Zhang, Xiao-Bing; Lv, Yifan; Gong, Liang; Wang, Ruowen; Zhu, Xiaoyan; Yang, Ronghua; Tan, Weihong

    2014-06-17

    CONSPECTUS: DNA performs a vital function as a carrier of genetic code, but in the field of nanotechnology, DNA molecules can catalyze chemical reactions in the cell, that is, DNAzymes, or bind with target-specific ligands, that is, aptamers. These functional DNAs with different modifications have been developed for sensing, imaging, and therapeutic systems. Thus, functional DNAs hold great promise for future applications in nanotechnology and bioanalysis. However, these functional DNAs face challenges, especially in the field of biomedicine. For example, functional DNAs typically require the use of cationic transfection reagents to realize cellular uptake. Such reagents enter the cells, increasing the difficulty of performing bioassays in vivo and potentially damaging the cell's nucleus. To address this obstacle, nanomaterials, such as metallic, carbon, silica, or magnetic materials, have been utilized as DNA carriers or assistants. In this Account, we describe selected examples of functional DNA-containing nanomaterials and their applications from our recent research and those of others. As models, we have chosen to highlight DNA/nanomaterial complexes consisting of gold nanoparticles, graphene oxides, and aptamer-micelles, and we illustrate the potential of such complexes in biosensing, imaging, and medical diagnostics. Under proper conditions, multiple ligand-receptor interactions, decreased steric hindrance, and increased surface roughness can be achieved from a high density of DNA that is bound to the surface of nanomaterials, resulting in a higher affinity for complementary DNA and other targets. In addition, this high density of DNA causes a high local salt concentration and negative charge density, which can prevent DNA degradation. For example, DNAzymes assembled on gold nanoparticles can effectively catalyze chemical reactions even in living cells. And it has been confirmed that DNA-nanomaterial complexes can enter cells more easily than free single

  15. Recent Advances in Nanoparticle-Based Förster Resonance Energy Transfer for Biosensing, Molecular Imaging and Drug Release Profiling

    Directory of Open Access Journals (Sweden)

    Nai-Tzu Chen

    2012-12-01

    Full Text Available Förster resonance energy transfer (FRET may be regarded as a “smart” technology in the design of fluorescence probes for biological sensing and imaging. Recently, a variety of nanoparticles that include quantum dots, gold nanoparticles, polymer, mesoporous silica nanoparticles and upconversion nanoparticles have been employed to modulate FRET. Researchers have developed a number of “visible” and “activatable” FRET probes sensitive to specific changes in the biological environment that are especially attractive from the biomedical point of view. This article reviews recent progress in bringing these nanoparticle-modulated energy transfer schemes to fruition for applications in biosensing, molecular imaging and drug delivery.

  16. Bio-sensing with butterfly wings: naturally occurring nano-structures for SERS-based malaria parasite detection.

    Science.gov (United States)

    Garrett, Natalie L; Sekine, Ryo; Dixon, Matthew W A; Tilley, Leann; Bambery, Keith R; Wood, Bayden R

    2015-09-07

    Surface enhanced Raman scattering (SERS) is a powerful tool with great potential to provide improved bio-sensing capabilities. The current 'gold-standard' method for diagnosis of malaria involves visual inspection of blood smears using light microscopy, which is time consuming and can prevent early diagnosis of the disease. We present a novel surface-enhanced Raman spectroscopy substrate based on gold-coated butterfly wings, which enabled detection of malarial hemozoin pigment within lysed blood samples containing 0.005% and 0.0005% infected red blood cells.

  17. Visible light induced photoelectrochemical biosensing based on oxygen-sensitive quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Wang Wenjing; Bao Lei [State Key Laboratory of Analytical Chemistry for Life Science, Department of Chemistry, Nanjing University, Nanjing 210093 (China); Lei Jianping, E-mail: jpl@nju.edu.cn [State Key Laboratory of Analytical Chemistry for Life Science, Department of Chemistry, Nanjing University, Nanjing 210093 (China); Tu Wenwen [State Key Laboratory of Analytical Chemistry for Life Science, Department of Chemistry, Nanjing University, Nanjing 210093 (China); Ju Huangxian, E-mail: hxju@nju.edu.cn [State Key Laboratory of Analytical Chemistry for Life Science, Department of Chemistry, Nanjing University, Nanjing 210093 (China)

    2012-09-26

    Highlights: Black-Right-Pointing-Pointer The near-infrared QDs are synthesized in an aqueous solution. Black-Right-Pointing-Pointer QDs-based biosensor exhibits visible-light induced cathodic photocurrent. Black-Right-Pointing-Pointer The oxygen dependency of the photocurrent is verified. Black-Right-Pointing-Pointer A photoelectrochemical strategy is established by coupling with enzymatic reaction. Black-Right-Pointing-Pointer Photoelectrochemical sensor shows high upper detection limit, acceptable stability and accuracy. - Abstract: A visible light induced photoelectrochemical biosensing platform based on oxygen-sensitive near-infrared quantum dots (NIR QDs) was developed for detection of glucose. The NIR QDs were synthesized in an aqueous solution, and characterized with scanning electron microscopy and X-ray photoelectron spectroscopy. The as-prepared NIR QDs were employed to construct oxygen-sensitive photoelectrochemical biosensor on a fluorine-doped tin oxide (FTO) electrode. The oxygen dependency of the photocurrent was investigated at as-prepared electrode, which demonstrated the signal of photocurrent is suppressed with the decreasing of oxygen. Coupling with the consumption of oxygen during enzymatic reaction, a photoelectrochemical strategy was proposed for the detection of substrate. Using glucose oxidase (GOx) as a model enzyme, that is, GOx was covalently attached to the surface of CdTe QDs, the resulting biosensor showed the sensitive response to glucose. Under the irradiation of visible light of a wavelength at 505 nm, the proposed photoelectrochemical method could detect glucose ranging from 0.1 mM to 11 mM with a detection limit of 0.04 mM. The photoelectrochemical biosensor showed a good performance with high upper detection limit, acceptable stability and accuracy, providing an alternative method for monitoring biomolecules and extending the application of near-infrared QDs.

  18. An innate immune system-mimicking, real-time biosensing of infectious bacteria.

    Science.gov (United States)

    Seo, Sung-Min; Jeon, Jin-Woo; Kim, Tae-Yong; Paek, Se-Hwan

    2015-09-07

    An animal cell-based biosensor was investigated to monitor bacterial contamination in an unattended manner by mimicking the innate immune response. The cells (RAW 264.7 cell line) were first attached onto the solid surfaces of a 96-well microtiter plate and co-incubated in the culture medium with a sample that might contain bacterial contaminants. As Toll-like receptors were present on the cell membrane surfaces, they acted as a sentinel by binding to pathogen-associated molecular patterns (PAMPs) of any contaminant. Such biological recognition initiates signal transmission along various pathways to produce different proinflammatory mediators, one of which, tumor necrosis factor-α (TNF-α) was measured using an immunosensor. To demonstrate automated bacterium monitoring, a capture antibody specific for TNF-α was immobilized on an optical fiber sensor tip and then used to measure complex formation in a label-free sensor system (e.g., Octet Red). The sensor response time depended significantly on the degree of agitation of the culture medium, controlling the biological recognition and further autocrine/paracrine signaling by cytokines. The response, particularly under non-agitated conditions, was also influenced by the medium volume, revealing a local gradient change of the cytokine concentration and also acidity, caused by bacterial growth near the bottom surfaces. A biosensor system retaining 50 μL medium and not employing agitation could be used for the early detection of bacterial contamination. This novel biosensing model was applied to the real-time monitoring of different bacteria, Shigella sonnei, Staphylococcus aureus, and Listeria monocytogenes. They (bacterial species, suggesting the concept of non-targeted bacterial real-time monitoring. This technique was further applied to real sample testing (e.g., with milk) to exemplify, for example, the food quality control process without using any additional sample pretreatment such as magnetic concentration.

  19. Preparation of graphene/nile blue nanocomposite: Application for oxygen reduction reaction and biosensing

    International Nuclear Information System (INIS)

    Shervedani, Reza Karimi; Amini, Akbar

    2015-01-01

    Highlights: •New nanocomposite is synthesized by electrochemical polymerization of Nile blue and reduction of GO on GCE. •The nanocomposite is characterized by SEM, UV–vis and electrochemical methods. •High electrocatalytic activity was observed for O 2 reduction on GNs-NB nanocomposite. •GCE-GNs-NB poly was tested successfully for immobilization of GOx and detection of glucose. -- Abstract: Nile blue/graphene (NB-GNs) nanocomposite was synthesized for the first time via a green and effective one-step electrochemical method, allowing to reduce graphene oxide (GO) and NB on the glassy carbon electrode (GCE) simultaneously and construct GCE-GNs-NB poly composite. The composite was characterized by scanning electron microscopy (SEM), UV–Vis spectroscopy, cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS). The electrochemical results obtained in the absence of any redox probe, where NB was active, allowed to trace step-by-step addition of the NB-GNs nanocomposite onto the GCE electrode surface, supporting formation of the GCE-GNs-NB poly composite. The electrocatalytic activity of the as-prepared GCE-GNs-NB poly towards O 2 reduction was studied in neutral medium. The results revealed excellent electrocatalytic performance for two-electron reduction of oxygen, suggesting its potential application as metal-free electrocatalysts for O 2 reduction reaction. Application of the GCE-GNs-NB poly in electrochemical biosensing was demonstrated by immobilization of glucose oxidase (GOx) on the surface of GCE-GNs-NB poly , and then, using it for sensing of glucose. The biosensor exhibited a linear response, from 0.2 to 2.0 mM glucose, with a low detection limit, 2.1 μM, and high sensitivity, 67.0 μA mM −1 cm −2 , obtained by cyclic voltammetry method. The proposed biosensor was successfully tested for determination of glucose in blood serum samples

  20. A novel approach for application of nylon membranes in the biosensing domain

    International Nuclear Information System (INIS)

    Farahmand, Elham; Ibrahim, Fatimah; Hosseini, Samira; Rothan, Hussin A.; Yusof, Rohana; Koole, Leo H.; Djordjevic, Ivan

    2015-01-01

    Graphical abstract: - Highlights: • Polymer coated nylon membranes as bioreceptor surfaces. • Carboxylated porous surface for protein immobilization. • High level of biosensing performance for dengue virus detection. - Abstract: In this paper we report the polymer-coated microporous nylon membranes and their application as platforms for protein immobilization and subsequent detection of the dengue virus (DV) in blood serum. Protein recognition experiments were performed with enzyme-linked immunosorbent assay (ELISA). The polymers used for coatings were synthesized by free-radical polymerization reaction between methyl methacrylate (MMA) and methacrylic acid (MAA) in different concentrations. The MAA monomer has carefully been chosen to generate polymers with pendant carboxyl (–COOH) groups, which also exist on polymer surfaces. A high degree of control over surface-exposed –COOH groups has been achieved through variation of monomers concentration in polymerization reaction. The general aspect of this work relies on the dengue antibody (Ab) immobilization on surface –COOH groups via physical attachment or covalent immobilization. Prior to Ab immobilization and ELISA experiment, polymer-coated nylon samples were analyzed in detail for their physical properties by atomic force microscopy (AFM), scanning electron microscopy (SEM), and water-in-air contact angle (WCA) measurements. Membranes were further analyzed by Fourier transform infrared spectroscopy (FTIR) in order to establish the relationship between wettability, porosity, and surface roughness with chemical composition and concentration of –COOH groups on the coating's surface. Optimized coatings have shown high sensitivity towards dengue Ab molecules, revealing fundamental aspect of polymer–protein interfaces as a function of surface –COOH groups’ concentration.

  1. A novel approach for application of nylon membranes in the biosensing domain

    Energy Technology Data Exchange (ETDEWEB)

    Farahmand, Elham; Ibrahim, Fatimah; Hosseini, Samira [Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia); Center for Innovation in Medical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia); Rothan, Hussin A.; Yusof, Rohana [Department of Molecular Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur 50603 (Malaysia); Koole, Leo H. [Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia); Center for Innovation in Medical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia); Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht (Netherlands); Djordjevic, Ivan, E-mail: ivandjordjevich@hotmail.com [Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia); Center for Innovation in Medical Engineering, Faculty of Engineering, University of Malaya, Kuala Lumpur 50603 (Malaysia)

    2015-10-30

    Graphical abstract: - Highlights: • Polymer coated nylon membranes as bioreceptor surfaces. • Carboxylated porous surface for protein immobilization. • High level of biosensing performance for dengue virus detection. - Abstract: In this paper we report the polymer-coated microporous nylon membranes and their application as platforms for protein immobilization and subsequent detection of the dengue virus (DV) in blood serum. Protein recognition experiments were performed with enzyme-linked immunosorbent assay (ELISA). The polymers used for coatings were synthesized by free-radical polymerization reaction between methyl methacrylate (MMA) and methacrylic acid (MAA) in different concentrations. The MAA monomer has carefully been chosen to generate polymers with pendant carboxyl (–COOH) groups, which also exist on polymer surfaces. A high degree of control over surface-exposed –COOH groups has been achieved through variation of monomers concentration in polymerization reaction. The general aspect of this work relies on the dengue antibody (Ab) immobilization on surface –COOH groups via physical attachment or covalent immobilization. Prior to Ab immobilization and ELISA experiment, polymer-coated nylon samples were analyzed in detail for their physical properties by atomic force microscopy (AFM), scanning electron microscopy (SEM), and water-in-air contact angle (WCA) measurements. Membranes were further analyzed by Fourier transform infrared spectroscopy (FTIR) in order to establish the relationship between wettability, porosity, and surface roughness with chemical composition and concentration of –COOH groups on the coating's surface. Optimized coatings have shown high sensitivity towards dengue Ab molecules, revealing fundamental aspect of polymer–protein interfaces as a function of surface –COOH groups’ concentration.

  2. Quantitative radiography

    International Nuclear Information System (INIS)

    Brase, J.M.; Martz, H.E.; Waltjen, K.E.; Hurd, R.L.; Wieting, M.G.

    1986-01-01

    Radiographic techniques have been used in nondestructive evaluation primarily to develop qualitative information (i.e., defect detection). This project applies and extends the techniques developed in medical x-ray imaging, particularly computed tomography (CT), to develop quantitative information (both spatial dimensions and material quantities) on the three-dimensional (3D) structure of solids. Accomplishments in FY 86 include (1) improvements in experimental equipment - an improved microfocus system that will give 20-μm resolution and has potential for increased imaging speed, and (2) development of a simple new technique for displaying 3D images so as to clearly show the structure of the object. Image reconstruction and data analysis for a series of synchrotron CT experiments conducted by LLNL's Chemistry Department has begun

  3. Mitigating the effect of optical back-scatter in multispectral underwater imaging

    International Nuclear Information System (INIS)

    Mortazavi, Halleh; Oakley, John P; Barkat, Braham

    2013-01-01

    Multispectral imaging is a very useful technique for extracting information from the underwater world. However, optical back-scatter changes the intensity value in each spectral band and this distorts the estimated spectrum. In this work, a filter is used to detect the level of optical back-scatter in each spectral band from a set of multispectral images. Extraction of underwater object spectra can be done by subtracting the estimated level of optical back-scatter and scaling the remainder in each spectral band from the captured image in the corresponding band. An experiment has been designed to show the performance of the proposed filter for correcting the set of multispectral underwater images and recovering the pixel spectra. The multispectral images are captured by a B/W CCD digital camera with a fast tunable liquid-crystal filter in 33 narrow spectral bands in clear and different levels of turbid water. Reference estimates for the optical back-scatter spectra are found by comparing a clear and a degraded set of multispectral images. The accuracy and consistency of the proposed method, the extended Oakley–Bu cost function, is examined by comparing the estimated values with the reference level of an optical back-scatter spectrum. The same comparison is made for the simple estimation approach. The results show that the simple method is not reliable and fail to estimate the level of optical back-scatter spectrum accurately. The results from processing experimental images in turbid water show that the effect of optical back-scatter can be mitigated in the image of each spectral band and, as a result, the spectra of the object can be recovered. However, for a very high level of turbid water the recovery is limited because of the effect of extinction. (paper)

  4. Quantitative lymphography

    International Nuclear Information System (INIS)

    Mostbeck, A.; Lofferer, O.; Kahn, P.; Partsch, H.; Koehn, H.; Bialonczyk, Ch.; Koenig, B.

    1984-01-01

    Labelled colloids and macromolecules are removed lymphatically. The uptake of tracer in the regional lymphnodes is a parameter of lymphatic flow. Due to great variations in patient shape - obesity, cachexia - and accompanying variations in counting efficiencies quantitative measurements with reasonable accuracy have not been reported to date. A new approach to regional absorption correction is based on the combination of transmission and emission scans for each patient. The transmission scan is used for calculation of an absorption correction matrix. Accurate superposition of the correction matrix and the emission scan is achieved by computing the centers of gravity of point sources and - in the case of aligning opposite views - by cross correlation of binary images. In phantom studies the recovery was high (98.3%) and the coefficient of variation of repeated measurement below 1%. In patient studies a standardized stress is a prerequisite for reliable and comparable results. Discrimination between normals (14.3 +- 4.2D%) and patients with lymphedema (2.05 +- 2.5D%) was highly significant using praefascial lymphography and sc injection. Clearence curve analysis of the activities at the injection site, however, gave no reliable data for this purpose. In normals, the uptake in lymphnodes after im injection is by one order of magnitude lower then the uptake after sc injection. The discrimination between normals and patients with postthromboic syndrome was significant. Lymphography after ic injection was in the normal range in 2/3 of the patients with lymphedema and is therefore of no diagnostic value. The difference in uptake after ic and sc injection demonstrated for the first time by our quantitative method provides new insights into the pathophysiology of lymphedema and needs further investigation. (Author)

  5. Quantitative Thermochronology

    Science.gov (United States)

    Braun, Jean; van der Beek, Peter; Batt, Geoffrey

    2006-05-01

    Thermochronology, the study of the thermal history of rocks, enables us to quantify the nature and timing of tectonic processes. Quantitative Thermochronology is a robust review of isotopic ages, and presents a range of numerical modeling techniques to allow the physical implications of isotopic age data to be explored. The authors provide analytical, semi-analytical, and numerical solutions to the heat transfer equation in a range of tectonic settings and under varying boundary conditions. They then illustrate their modeling approach built around a large number of case studies. The benefits of different thermochronological techniques are also described. Computer programs on an accompanying website at www.cambridge.org/9780521830577 are introduced through the text and provide a means of solving the heat transport equation in the deforming Earth to predict the ages of rocks and compare them directly to geological and geochronological data. Several short tutorials, with hints and solutions, are also included. Numerous case studies help geologists to interpret age data and relate it to Earth processes Essential background material to aid understanding and using thermochronological data Provides a thorough treatise on numerical modeling of heat transport in the Earth's crust Supported by a website hosting relevant computer programs and colour slides of figures from the book for use in teaching

  6. Influence of aspect ratio and surface defect density on hydrothermally grown ZnO nanorods towards amperometric glucose biosensing applications

    Science.gov (United States)

    Shukla, Mayoorika; Pramila; Dixit, Tejendra; Prakash, Rajiv; Palani, I. A.; Singh, Vipul

    2017-11-01

    In this work, hydrothermally grown ZnO Nanorods Array (ZNA) has been synthesized over Platinum (Pt) coated glass substrate, for biosensing applications. In-situ addition of strong oxidizing agent viz KMnO4 during hydrothermal growth was found to have profound effect on the physical properties of ZNA. Glucose oxidase (GOx) was later immobilized over ZNA by means of physical adsorption process. Further influence of varying aspect ratio, enzyme loading and surface defects on amperometric glucose biosensor has been analyzed. Significant variation in biosensor performance was observed by varying the amount of KMnO4 addition during the growth. Moreover, investigations revealed that the suppression of surface defects and aspect ratio variation of the ZNA played key role towards the observed improvement in the biosensor performance, thereby significantly affecting the sensitivity and response time of the fabricated biosensor. Among different biosensors fabricated having varied aspect ratio and surface defect density of ZNA, the best electrode resulted into sensitivity and response time to be 18.7 mA cm-2 M-1 and <5 s respectively. The observed results revealed that apart from high aspect ratio nanostructures and the extent of enzyme loading, surface defect density also hold a key towards ZnO nanostructures based bio-sensing applications.

  7. Biosensing of glucose in flow injection analysis system based on glucose oxidase-quantum dot modified pencil graphite electrode.

    Science.gov (United States)

    Sağlam, Özlem; Kızılkaya, Bayram; Uysal, Hüseyin; Dilgin, Yusuf

    2016-01-15

    A novel amperometric glucose biosensor was proposed in flow injection analysis (FIA) system using glucose oxidase (GOD) and Quantum dot (ZnS-CdS) modified Pencil Graphite Electrode (PGE). After ZnS-CdS film was electrochemically deposited onto PGE surface, GOD was immobilized on the surface of ZnS-CdS/PGE through crosslinking with chitosan (CT). A pair of well-defined reversible redox peak of GOD was observed at GOD/CT/ZnS-CdS/PGE based on enzyme electrode by direct electron transfer between the protein and electrode. Further, obtained GOD/CT/ZnS-CdS/PGE offers a disposable, low cost, selective and sensitive electrochemical biosensing of glucose in FIA system based on the decrease of the electrocatalytic response of the reduced form of GOD to dissolved oxygen. Under optimum conditions (flow rate, 1.3mL min(-1); transmission tubing length, 10cm; injection volume, 100μL; and constant applied potential, -500mV vs. Ag/AgCl), the proposed method displayed a linear response to glucose in the range of 0.01-1.0mM with detection limit of 3.0µM. The results obtained from this study would provide the basis for further development of the biosensing using PGE based FIA systems. Copyright © 2015 Elsevier B.V. All rights reserved.

  8. A universal and label-free impedimetric biosensing platform for discrimination of single nucleotide substitutions in long nucleic acid strands.

    Science.gov (United States)

    Mills, Dawn M; Martin, Christopher P; Armas, Stephanie M; Calvo-Marzal, Percy; Kolpashchikov, Dmitry M; Chumbimuni-Torres, Karin Y

    2018-06-30

    We report a label-free universal biosensing platform for highly selective detection of long nucleic acid strands. The sensor consists of an electrode-immobilized universal stem-loop (USL) probe and two adaptor strands that form a 4J structure in the presence of a specific DNA/RNA analyte. The sensor was characterized by electrochemical impedance spectroscopy (EIS) using K 3 [Fe(CN) 6 ]/K 4 [Fe(CN) 6 ] redox couple in solution. An increase in charge transfer resistance (R CT ) was observed upon 4J structure formation, the value of which depends on the analyte length. Cyclic voltammetry (CV) was used to further characterize the sensor and monitor the electrochemical reaction in conjunction with thickness measurements of the mixed DNA monolayer obtained using spectroscopic ellipsometry. In addition, the electron transfer was calculated at the electrode/electrolyte interface using a rotating disk electrode. Limits of detection in the femtomolar range were achieved for nucleic acid targets of different lengths (22 nt, 60 nt, 200 nt). The sensor produced only a background signal in the presence of single base mismatched analytes, even in hundred times excess in concentration. This label-free and highly selective biosensing platform is versatile and can be used for universal detection of nucleic acids of varied lengths which could revolutionize point of care diagnostics for applications such as bacterial or cancer screening. Copyright © 2018 Elsevier B.V. All rights reserved.

  9. Exploiting pH-Regulated Dimer-Tetramer Transformation of Concanavalin A to Develop Colorimetric Biosensing of Bacteria.

    Science.gov (United States)

    Xu, Xiahong; Yuan, Yuwei; Hu, Guixian; Wang, Xiangyun; Qi, Peipei; Wang, Zhiwei; Wang, Qiang; Wang, Xinquan; Fu, Yingchun; Li, Yanbin; Yang, Hua

    2017-05-03

    Gold nanoparticles (AuNPs) aggregation-based colorimetric biosensing remains a challenge for bacteria due to their large size. Here we propose a novel colorimetric biosensor for rapid detection of Escherichia coli O157:H7 (E. coli O157:H7) in milk samples based on pH-regulated transformation of dimer/tetramer of Concanavalin A (Con A) and the Con A-glycosyl recognition. Briefly, antibody-modified magnetic nanoparticles was used to capture and concentrate E. coli O157:H7 and then to label with Con A; pH adjusted to 5 was then applied to dissociate Con A tetramer to release dimer, which was collected and re-formed tetramer at pH of 7 to cause the aggregation of dextran-modified AuNPs. The interesting pH-dependent conformation-transformation behavior of Con A innovated the design of the release from the bacteria surface and then the reconstruction of Con A. Therefore, we realized the sensitive colorimetric biosensing of bacteria, which are much larger than AuNPs that is generally not suitable for this kind of method. The proposed biosensor exhibited a limit of detection down to 41 CFU/mL, short assay time (~95 min) and satisfactory specificity. The biosensor also worked well for the detection in milk sample, and may provide a universal concept for the design of colorimetric biosensors for bacteria and virus.

  10. Plasmonic nanoparticles-decorated diatomite biosilica: extending the horizon of on-chip chromatography and label-free biosensing.

    Science.gov (United States)

    Kong, Xianming; Li, Erwen; Squire, Kenny; Liu, Ye; Wu, Bo; Cheng, Li-Jing; Wang, Alan X

    2017-11-01

    Diatomite consists of fossilized remains of ancient diatoms and is a type of naturally abundant photonic crystal biosilica with multiple unique physical and chemical functionalities. In this paper, we explored the fluidic properties of diatomite as the matrix for on-chip chromatography and, simultaneously, the photonic crystal effects to enhance the plasmonic resonances of metallic nanoparticles for surface-enhanced Raman scattering (SERS) biosensing. The plasmonic nanoparticle-decorated diatomite biosilica provides a lab-on-a-chip capability to separate and detect small molecules from mixture samples with ultra-high detection sensitivity down to 1 ppm. We demonstrate the significant potential for biomedical applications by screening toxins in real biofluid, achieving simultaneous label-free biosensing of phenethylamine and miR21cDNA in human plasma with unprecedented sensitivity and specificity. To the best of our knowledge, this is the first time demonstration to detect target molecules from real biofluids by on-chip chromatography-SERS techniques. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Description of an Advantageous Optical Label-Free Biosensing Interferometric Read-Out Method to Measure Biological Species

    Directory of Open Access Journals (Sweden)

    Miguel Holgado

    2014-02-01

    Full Text Available In this article we report a new, simple, and reliable optical read-out detection method able to assess Rotavirus present in human sera as well as in the viral pollution sources. It is based on the interference of two interferometers used as biophotonic transducers. The method significantly improves the optical label-free biosensing response measuring both, the concentration of the AgR and its corresponding size. Two different immunoassays were carried out: Bovine Serum Albumin (BSA, and the recognition by its antibody (anti-BSA; and Rotavirus (AgR and the recognition by its antibody (anti-AgR. In the cases studied, and using as model interferometer a simple Fabry-Perot transducer, we demonstrate a biosensing enhancement of two orders of magnitude in the Limit of Detection (LoD. In fact, this read-out optical method may have significant implications to enhance other optical label-free photonic transducers reported in the scientific literature.

  12. An optical biosensing film for biochemical oxygen demand determination in seawater with an automatic flow sampling system

    Science.gov (United States)

    Xin, Lingling; Wang, Xudong; Guo, Guangmei; Wang, Xiaoru; Chen, Xi

    2007-09-01

    An on-line roboticized apparatus, including an optical biosensing film with an automatic flow sampling system, has been developed for biochemical oxygen demand (BOD) determination of seawater. The sensing film employed in the apparatus consisted of an organically modified silicate (ORMOSIL) film embedded with tri(4,7-diphenyl-1,10-phenanthroline) ruthenium(II) perchlorate. Three species of microorganism cultivated from seawater were immobilized in an ORMOSIL-polyvinyl alcohol matrix. Possible factors affecting BOD determination were studied, including sampling frequency, temperature, pH and sodium chloride concentration. Based on measurements of the linear fluctuant coefficients and the reproducibility of its response to seawater, the BOD apparatus showed the advantages of high veracity and short response time. Generally, the linear fluctuant coefficient (R2) in the BOD range 0.2-40 mg l-1 was 0.9945 when using a glucose/glutamate (GGA) BOD standard solution. A reproducible response for the BOD sensing film of within ±2.8% could be obtained in the 2 mg l-1 GGA solution. The BOD apparatus was applied to the BOD determination of seawater, and the values estimated by this biosensing apparatus correlated well with those determined by the conventional 5 day BOD (BOD5) test.

  13. Mosaic of gridded multibeam bathymetry and bathymetry derived from multispectral IKONOS satellite imagery of Tutuila Island, American Samoa, USA

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gridded multibeam bathymetry is integrated with bathymetry derived from multispectral IKONOS satellite data. Gridded (5 m cell size) multibeam bathymetry collected...

  14. Mosaic of gridded multibeam bathymetry and bathymetry derived from multispectral IKONOS satellite imagery of Rose Atoll, American Samoa, USA

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gridded multibeam bathymetry is integrated with bathymetry derived from multispectral IKONOS satellite data. Gridded (5 m cell size) multibeam bathymetry were...

  15. Mosaic of bathymetry derived from multispectral WV-2 satellite imagery of Agrihan Island, Territory of Mariana, USA (NODC Accession 0126914)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Bathymetric data derived from a multispectral World View-2 satellite image mosaiced to provide near complete coverage of nearshore terrain around the islands....

  16. A Lightweight Compact Multi-Spectral Imager Using Novel Computer-Generated Micro-Optics and Spectral-Extraction Algorithms

    Data.gov (United States)

    National Aeronautics and Space Administration — The objective of this NASA Early-stage research proposal is to demonstrate an ultra-compact, lightweight broadband hyper- and multi-spectral imaging system that is...

  17. Suspended sediment concentration and optical property observations of mixed-turbidity, coastal waters through multispectral ocean color inversion

    Science.gov (United States)

    Multispectral satellite ocean color data from high-turbidity areas of the coastal ocean contain information about the surface concentrations and optical properties of suspended sediments and colored dissolved organic matter (CDOM). Empirical and semi-analytical inversion algorit...

  18. Multispectral confocal microscopy images and artificial neural nets to monitor the photosensitizer uptake and degradation in Candida albicans cells

    Science.gov (United States)

    Romano, Renan A.; Pratavieira, Sebastião.; da Silva, Ana P.; Kurachi, Cristina; Guimarães, Francisco E. G.

    2017-07-01

    This study clearly demonstrates that multispectral confocal microscopy images analyzed by artificial neural networks provides a powerful tool to real-time monitoring photosensitizer uptake, as well as photochemical transformations occurred.

  19. The quantitative Morse theorem

    OpenAIRE

    Loi, Ta Le; Phien, Phan

    2013-01-01

    In this paper, we give a proof of the quantitative Morse theorem stated by {Y. Yomdin} in \\cite{Y1}. The proof is based on the quantitative Sard theorem, the quantitative inverse function theorem and the quantitative Morse lemma.

  20. Surface-Enhanced Raman Spectroscopy Based Quantitative Bioassay on Aptamer-Functionalized Nanopillars Using Large-Area Raman Mapping

    DEFF Research Database (Denmark)

    Yang, Jaeyoung; Palla, Mirko; Bosco, Filippo

    2013-01-01

    Surface-enhanced Raman spectroscopy (SERS) has been used in a variety of biological applications due to its high sensitivity and specificity. Here, we report a SERS-based biosensing approach for quantitative detection of biomolecules. A SERS substrate bearing gold-decorated silicon nanopillars......-to-spot variation in conventional SERS quantification. Furthermore, we have developed an analytical model capable of predicting experimental intensity distributions on the substrates for reliable quantification of biomolecules. Lastly, we have calculated the minimum needed area of Raman mapping for efficient...

  1. A Self-Powered Wearable Noninvasive Electronic-Skin for Perspiration Analysis Based on Piezo-Biosensing Unit Matrix of Enzyme/ZnO Nanoarrays.

    Science.gov (United States)

    Han, Wuxiao; He, Haoxuan; Zhang, Linlin; Dong, Chuanyi; Zeng, Hui; Dai, Yitong; Xing, Lili; Zhang, Yan; Xue, Xinyu

    2017-09-06

    The emerging multifunctional flexible electronic-skin for establishing body-electric interaction can enable real-time monitoring of personal health status as a new personalized medicine technique. A key difficulty in the device design is the flexible power supply. Here a self-powered wearable noninvasive electronic-skin for perspiration analysis has been realized on the basis of a piezo-biosensing unit matrix of enzyme/ZnO nanoarrays. The electronic-skin can detect lactate, glucose, uric acid, and urea in the perspiration, and no outside electrical power supply or battery is used in the biosensing process. The piezoelectric impulse of the piezo-biosensing units serves as the power supply and the data biosensor. The working mechanism can be ascribed to the piezoelectric-enzymatic-reaction coupling effect of enzyme/ZnO nanowires. The electronic-skin can real-time/continuously monitor the physiological state of a runner through analyzing the perspiration on his skin. This approach can promote the development of a new-type of body electric and self-powered biosensing electronic-skin.

  2. Object-based analysis of multispectral airborne laser scanner data for land cover classification and map updating

    Science.gov (United States)

    Matikainen, Leena; Karila, Kirsi; Hyyppä, Juha; Litkey, Paula; Puttonen, Eetu; Ahokas, Eero

    2017-06-01

    During the last 20 years, airborne laser scanning (ALS), often combined with passive multispectral information from aerial images, has shown its high feasibility for automated mapping processes. The main benefits have been achieved in the mapping of elevated objects such as buildings and trees. Recently, the first multispectral airborne laser scanners have been launched, and active multispectral information is for the first time available for 3D ALS point clouds from a single sensor. This article discusses the potential of this new technology in map updating, especially in automated object-based land cover classification and change detection in a suburban area. For our study, Optech Titan multispectral ALS data over a suburban area in Finland were acquired. Results from an object-based random forests analysis suggest that the multispectral ALS data are very useful for land cover classification, considering both elevated classes and ground-level classes. The overall accuracy of the land cover classification results with six classes was 96% compared with validation points. The classes under study included building, tree, asphalt, gravel, rocky area and low vegetation. Compared to classification of single-channel data, the main improvements were achieved for ground-level classes. According to feature importance analyses, multispectral intensity features based on several channels were more useful than those based on one channel. Automatic change detection for buildings and roads was also demonstrated by utilising the new multispectral ALS data in combination with old map vectors. In change detection of buildings, an old digital surface model (DSM) based on single-channel ALS data was also used. Overall, our analyses suggest that the new data have high potential for further increasing the automation level in mapping. Unlike passive aerial imaging commonly used in mapping, the multispectral ALS technology is independent of external illumination conditions, and there are

  3. Integrated Lateral Flow Device for Flow Control with Blood Separation and Biosensing

    Directory of Open Access Journals (Sweden)

    Veronica Betancur

    2017-12-01

    with the LFD. The developed LFD can be used as a flexible and versatile platform, and has the potential for detecting circulating biomarkers from whole blood. Sandwich-immunoassays can be performed directly on the LFD by patterning receptors for analytes on a desired substrate, and detections can be performed using a variety of sensing methods including nanoelectronic, colorimetric, or fluorescence sensors. The described bio-sensing technology presents an alternative for POC testing using small samples of human whole blood. It could benefit regions with limited access to healthcare, where delays in diagnosis can lead to quick deterioration of the quality of life and increase the morbidity and mortality.

  4. Efficient protein immobilization on polyethersolfone electrospun nanofibrous membrane via covalent binding for biosensing applications

    Energy Technology Data Exchange (ETDEWEB)

    Mahmoudifard, Matin [Institute for Nanoscience and Nanotechnology, Sharif University of Technology, Tehran (Iran, Islamic Republic of); Soudi, Sara [Stem Cell Biology Department, Stem Cell Technology Research Center, Tehran (Iran, Islamic Republic of); Department of Immunology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran (Iran, Islamic Republic of); Soleimani, Masoud [Department of Hematology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran (Iran, Islamic Republic of); Hosseinzadeh, Simzar [Nanotechnology and Tissue Engineering Department, Stem Cell Technology Research Center, Tehran (Iran, Islamic Republic of); School of Advanced Medical Technologies, Tehran University of Medical Sciences, Tehran (Iran, Islamic Republic of); Esmaeili, Elaheh [Institute for Nanoscience and Nanotechnology, Sharif University of Technology, Tehran (Iran, Islamic Republic of); Department of Hematology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran (Iran, Islamic Republic of); Vossoughi, Manouchehr, E-mail: vosoughi@sharif.edu [Institute for Nanoscience and Nanotechnology, Sharif University of Technology, Tehran (Iran, Islamic Republic of); Chemical and Petroleum Engineering Department, Sharif University of Technology, Tehran (Iran, Islamic Republic of)

    2016-01-01

    In this paper we introduce novel strategy for antibody immobilization using high surface area electrospun nanofibrous membrane based on ethyl-3-(3-dimethylaminopropyl)-carbodiimide/N-hydroxysuccinimide (EDC/NHS) coupling chemistry. To present the high performance of proposed biosensors, anti-staphylococcus enterotoxin B (anti-SEB) was used as a model to demonstrate the utility of our proposed system. Polymer solution of polyethersolfone was used to fabricate fine nanofibrous membrane. Moreover, industrial polyvinylidene fluoride membrane and conventional microtiter plate were also used to compare the efficiency of antibody immobilization. Scanning electron microscopy images were taken to study the morphology of the membranes. The surface activation of nanofibrous membrane was done with the help of O{sub 2} plasma. PES nanofibrous membrane with carboxyl functional groups for covalent attachment of antibodies were treated by EDC/NHS coupling agent. The quantity of antibody immobilization was measured by enzyme-linked immuno sorbent assay (ELISA) method. Attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR) spectroscopy was performed to confirm the covalent immobilization of antibody on membrane. Atomic force microscopy, scanning electron microscopy and invert fluorescence microscopy were used to analyze the antibody distribution pattern on solid surfaces. Results show that oxygen plasma treatment effectively increased the amount of antibody immobilization through EDC/NHS coupling chemistry. It was found that the use of nanofibrous membrane causes the improved detection signal of ELISA based biosensors in comparison to the standard assay carried out in the 96-well microtiter plate. This method has the potential to improve the ELISA-based biosensor and we believe that this technique can be used in various biosensing methods. - Highlights: • Introduction of novel strategy for antibody immobilization using high surface area electrospun

  5. Generating Multispectral VIIRS Imagery in Near Real-Time for Use by the National Weather Service in Alaska

    Science.gov (United States)

    Broderson, D.; Dierking, C.; Stevens, E.; Heinrichs, T. A.; Cherry, J. E.

    2016-12-01

    The Geographic Information Network of Alaska (GINA) at the University of Alaska Fairbanks (UAF) uses two direct broadcast antennas to receive data from a number of polar-orbiting weather satellites, including the Suomi National Polar Partnership (S-NPP) satellite. GINA uses data from S-NPP's Visible Infrared Imaging Radiometer Suite (VIIRS) to generate a variety of multispectral imagery products developed with the needs of the National Weather Service operational meteorologist in mind. Multispectral products have two primary advantages over single-channel products. First, they can more clearly highlight some terrain and meteorological features which are less evident in the component single channels. Second, multispectral present the information from several bands through just one image, thereby sparing the meteorologist unnecessary time interrogating the component single bands individually. With 22 channels available from the VIIRS instrument, the number of possible multispectral products is theoretically huge. A small number of products will be emphasized in this presentation, with the products chosen based on their proven utility in the forecasting environment. Multispectral products can be generated upstream of the end user or by the end user at their own workstation. The advantage and disadvantages of both approaches will be outlined. Lastly, the technique of improving the appearance of multispectral imagery by correcting for atmospheric reflectance at the shorter wavelengths will be described.

  6. SPECTRUM analysis of multispectral imagery in conjunction with wavelet/KLT data compression

    Energy Technology Data Exchange (ETDEWEB)

    Bradley, J.N.; Brislawn, C.M.

    1993-12-01

    The data analysis program, SPECTRUM, is used for fusion, visualization, and classification of multi-spectral imagery. The raw data used in this study is Landsat Thematic Mapper (TM) 7-channel imagery, with 8 bits of dynamic range per channel. To facilitate data transmission and storage, a compression algorithm is proposed based on spatial wavelet transform coding and KLT decomposition of interchannel spectral vectors, followed by adaptive optimal multiband scalar quantization. The performance of SPECTRUM clustering and visualization is evaluated on compressed multispectral data. 8-bit visualizations of 56-bit data show little visible distortion at 50:1 compression and graceful degradation at higher compression ratios. Two TM images were processed in this experiment: a 1024 x 1024-pixel scene of the region surrounding the Chernobyl power plant, taken a few months before the reactor malfunction, and a 2048 x 2048 image of Moscow and surrounding countryside.

  7. Digital staining for histopathology multispectral images by the combined application of spectral enhancement and spectral transformation.

    Science.gov (United States)

    Bautista, Pinky A; Yagi, Yukako

    2011-01-01

    In this paper we introduced a digital staining method for histopathology images captured with an n-band multispectral camera. The method consisted of two major processes: enhancement of the original spectral transmittance and the transformation of the enhanced transmittance to its target spectral configuration. Enhancement is accomplished by shifting the original transmittance with the scaled difference between the original transmittance and the transmittance estimated with m dominant principal component (PC) vectors;the m-PC vectors were determined from the transmittance samples of the background image. Transformation of the enhanced transmittance to the target spectral configuration was done using an nxn transformation matrix, which was derived by applying a least square method to the enhanced and target spectral training data samples of the different tissue components. Experimental results on the digital conversion of a hematoxylin and eosin (H&E) stained multispectral image to its Masson's trichrome stained (MT) equivalent shows the viability of the method.

  8. [A cloud detection algorithm for MODIS images combining Kmeans clustering and multi-spectral threshold method].

    Science.gov (United States)

    Wang, Wei; Song, Wei-Guo; Liu, Shi-Xing; Zhang, Yong-Ming; Zheng, Hong-Yang; Tian, Wei

    2011-04-01

    An improved method for detecting cloud combining Kmeans clustering and the multi-spectral threshold approach is described. On the basis of landmark spectrum analysis, MODIS data is categorized into two major types initially by Kmeans method. The first class includes clouds, smoke and snow, and the second class includes vegetation, water and land. Then a multi-spectral threshold detection is applied to eliminate interference such as smoke and snow for the first class. The method is tested with MODIS data at different time under different underlying surface conditions. By visual method to test the performance of the algorithm, it was found that the algorithm can effectively detect smaller area of cloud pixels and exclude the interference of underlying surface, which provides a good foundation for the next fire detection approach.

  9. Preliminary analysis of the forest health state based on multispectral images acquired by Unmanned Aerial Vehicle

    Directory of Open Access Journals (Sweden)

    Czapski Paweł

    2015-09-01

    Full Text Available The main purpose of this publication is to present the current progress of the work associated with the use of a lightweight unmanned platforms for various environmental studies. Current development in information technology, electronics and sensors miniaturisation allows mounting multispectral cameras and scanners on unmanned aerial vehicle (UAV that could only be used on board aircraft and satellites. Remote Sensing Division in the Institute of Aviation carries out innovative researches using multisensory platform and lightweight unmanned vehicle to evaluate the health state of forests in Wielkopolska province. In this paper, applicability of multispectral images analysis acquired several times during the growing season from low altitude (up to 800m is presented. We present remote sensing indicators computed by our software and common methods for assessing state of trees health. The correctness of applied methods is verified using analysis of satellite scenes acquired by Landsat 8 OLI instrument (Operational Land Imager.

  10. Comparison of a multispectral vision system and a colorimeter for the assessment of meat color

    DEFF Research Database (Denmark)

    Trinderup, Camilla Himmelstrup; Dahl, Anders Bjorholm; Jensen, Kirsten

    2015-01-01

    The color assessment ability of a multispectral vision system is investigated by a comparison study with color measurements from a traditional colorimeter. The experiment involves fresh and processed meat samples. Meat is a complex material; heterogeneous with varying scattering and reflectance...... are equally capable of measuring color. Moreover the vision system provides a more color rich assessment of fresh meat samples with a glossier surface, than the colorimeter. Careful studies of the different sources of variation enable an assessment of the order of magnitude of the variability between methods...... accounting for other sources of variation leading to the conclusion that color assessment using a multispectral vision system is superior to traditional colorimeter assessments. (C) 2014 Elsevier Ltd. All rights reserved....

  11. Application of Multilayer Perceptron with Automatic Relevance Determination on Weed Mapping Using UAV Multispectral Imagery.

    Science.gov (United States)

    Tamouridou, Afroditi A; Alexandridis, Thomas K; Pantazi, Xanthoula E; Lagopodi, Anastasia L; Kashefi, Javid; Kasampalis, Dimitris; Kontouris, Georgios; Moshou, Dimitrios

    2017-10-11

    Remote sensing techniques are routinely used in plant species discrimination and of weed mapping. In the presented work, successful Silybum marianum detection and mapping using multilayer neural networks is demonstrated. A multispectral camera (green-red-near infrared) attached on a fixed wing unmanned aerial vehicle (UAV) was utilized for the acquisition of high-resolution images (0.1 m resolution). The Multilayer Perceptron with Automatic Relevance Determination (MLP-ARD) was used to identify the S. marianum among other vegetation, mostly Avena sterilis L. The three spectral bands of Red, Green, Near Infrared (NIR) and the texture layer resulting from local variance were used as input. The S. marianum identification rates using MLP-ARD reached an accuracy of 99.54%. Τhe study had an one year duration, meaning that the results are specific, although the accuracy shows the interesting potential of S. marianum mapping with MLP-ARD on multispectral UAV imagery.

  12. Novelty Detection Classifiers in Weed Mapping: Silybum marianum Detection on UAV Multispectral Images.

    Science.gov (United States)

    Alexandridis, Thomas K; Tamouridou, Afroditi Alexandra; Pantazi, Xanthoula Eirini; Lagopodi, Anastasia L; Kashefi, Javid; Ovakoglou, Georgios; Polychronos, Vassilios; Moshou, Dimitrios

    2017-09-01

    In the present study, the detection and mapping of Silybum marianum (L.) Gaertn. weed using novelty detection classifiers is reported. A multispectral camera (green-red-NIR) on board a fixed wing unmanned aerial vehicle (UAV) was employed for obtaining high-resolution images. Four novelty detection classifiers were used to identify S. marianum between other vegetation in a field. The classifiers were One Class Support Vector Machine (OC-SVM), One Class Self-Organizing Maps (OC-SOM), Autoencoders and One Class Principal Component Analysis (OC-PCA). As input features to the novelty detection classifiers, the three spectral bands and texture were used. The S. marianum identification accuracy using OC-SVM reached an overall accuracy of 96%. The results show the feasibility of effective S. marianum mapping by means of novelty detection classifiers acting on multispectral UAV imagery.

  13. An improved feature extraction algorithm based on KAZE for multi-spectral image

    Science.gov (United States)

    Yang, Jianping; Li, Jun

    2018-02-01

    Multi-spectral image contains abundant spectral information, which is widely used in all fields like resource exploration, meteorological observation and modern military. Image preprocessing, such as image feature extraction and matching, is indispensable while dealing with multi-spectral remote sensing image. Although the feature matching algorithm based on linear scale such as SIFT and SURF performs strong on robustness, the local accuracy cannot be guaranteed. Therefore, this paper proposes an improved KAZE algorithm, which is based on nonlinear scale, to raise the number of feature and to enhance the matching rate by using the adjusted-cosine vector. The experiment result shows that the number of feature and the matching rate of the improved KAZE are remarkably than the original KAZE algorithm.

  14. Discrimination techniques employing both reflective and thermal multispectral signals. [for remote sensor technology

    Science.gov (United States)

    Malila, W. A.; Crane, R. B.; Richardson, W.

    1973-01-01

    Recent improvements in remote sensor technology carry implications for data processing. Multispectral line scanners now exist that can collect data simultaneously and in registration in multiple channels at both reflective and thermal (emissive) wavelengths. Progress in dealing with two resultant recognition processing problems is discussed: (1) More channels mean higher processing costs; to combat these costs, a new and faster procedure for selecting subsets of channels has been developed. (2) Differences between thermal and reflective characteristics influence recognition processing; to illustrate the magnitude of these differences, some explanatory calculations are presented. Also introduced, is a different way to process multispectral scanner data, namely, radiation balance mapping and related procedures. Techniques and potentials are discussed and examples presented.

  15. Registration of 3D and Multispectral Data for the Study of Cultural Heritage Surfaces

    Science.gov (United States)

    Chane, Camille Simon; Schütze, Rainer; Boochs, Frank; Marzani, Franck S.

    2013-01-01

    We present a technique for the multi-sensor registration of featureless datasets based on the photogrammetric tracking of the acquisition systems in use. This method is developed for the in situ study of cultural heritage objects and is tested by digitizing a small canvas successively with a 3D digitization system and a multispectral camera while simultaneously tracking the acquisition systems with four cameras and using a cubic target frame with a side length of 500 mm. The achieved tracking accuracy is better than 0.03 mm spatially and 0.150 mrad angularly. This allows us to seamlessly register the 3D acquisitions and to project the multispectral acquisitions on the 3D model. PMID:23322103

  16. Multispectral imaging as a potential tool for seed health testing of spinach (Spinacia oleracea L.)

    DEFF Research Database (Denmark)

    Olesen, M. Halkjaer; Carstensen, Jens Michael; Boelt, B.

    2011-01-01

    Seed health tests are time consuming and require substantial training for characterization of pathogenic fungi on seed. A new approach to use a multispectral vision system for identifying surface properties of different fungal infections has been tested in spinach (Spinacia oleracea L.) at Aarhus...... University. Our study demonstrates that multispectral imaging with wavelengths ranging from 395-970 nm can be used to distinguish between uninfected spinach seeds and seeds infected with Verticillium spp., Fusarium spp., Stemphylium botryosum, Cladosporium spp. and Alternaria alternata. Analytical separation...... based on mean pixel intensity, Canonical Discriminant Analysis (CDA) and classification by Jeffries-Matusita (JM) distance illustrates that a combination of Near Infrared spectra (NIR) and Visual spectra (VIS) is able to identify uninfected seeds from infected seeds ranging from 80-100%. Classification...

  17. Determination of astaxanthin concentration in Rainbow trout (Oncorhynchus mykiss) by multispectral image analysis

    DEFF Research Database (Denmark)

    Frosch, Stina; Dissing, Bjørn Skovlund; Ersbøll, Bjarne Kjær

    Astaxanthin is the single most expensive constituent in salmonide fish feed. Therefore control and optimization of the astaxanthin concentration from feed to fish is of paramount importance for a cost effective salmonide production. Traditionally, methods for astaxanthin determination include...... extraction of astaxanthin from the minced sample into a suitable solvent such as acetone or hexane before further analysis. The existing methods have several drawbacks including being destructive and labour consuming. Current state-of-the art vision systems for quality and process control in the fish...... to a larger degree than in a trichromatic image. In this study multispectral imaging has been evaluated for characterization of the concentration of astaxanthin in rainbow trout fillets. Rainbow trout’s (Oncorhynchus mykiss), were filleted and imaged using a rapid multispectral imaging device...

  18. Ship-Iceberg Discrimination in Sentinel-2 Multispectral Imagery by Supervised Classification

    Directory of Open Access Journals (Sweden)

    Peder Heiselberg

    2017-11-01

    Full Text Available The European Space Agency Sentinel-2 satellites provide multispectral images with pixel sizes down to 10 m. This high resolution allows for fast and frequent detection, classification and discrimination of various objects in the sea, which is relevant in general and specifically for the vast Arctic environment. We analyze several sets of multispectral image data from Denmark and Greenland fall and winter, and describe a supervised search and classification algorithm based on physical parameters that successfully finds and classifies all objects in the sea with reflectance above a threshold. It discriminates between objects like ships, islands, wakes, and icebergs, ice floes, and clouds with accuracy better than 90%. Pan-sharpening the infrared bands leads to classification and discrimination of ice floes and clouds better than 95%. For complex images with abundant ice floes or clouds, however, the false alarm rate dominates for small non-sailing boats.

  19. Self-training-based spectral image reconstruction for art paintings with multispectral imaging.

    Science.gov (United States)

    Xu, Peng; Xu, Haisong; Diao, Changyu; Ye, Zhengnan

    2017-10-20

    A self-training-based spectral reflectance recovery method was developed to accurately reconstruct the spectral images of art paintings with multispectral imaging. By partitioning the multispectral images with the k-means clustering algorithm, the training samples are directly extracted from the art painting itself to restrain the deterioration of spectral estimation caused by the material inconsistency between the training samples and the art painting. Coordinate paper is used to locate the extracted training samples. The spectral reflectances of the extracted training samples are acquired indirectly with a spectroradiometer, and the circle Hough transform is adopted to detect the circle measuring area of the spectroradiometer. Through simulation and a practical experiment, the implementation of the proposed method is explained in detail, and it is verified to have better reflectance recovery performance than that using the commercial target and is comparable to the approach using a painted color target.

  20. Extension of ERIM multispectral data processing capabilities through improved data handling techniques

    Science.gov (United States)

    Kriegler, F. J.

    1973-01-01

    The improvement and extension of the capabilities of the Environmental Research Institute of Michigan processing facility in handling multispectral data are discussed. Improvements consisted of implementing hardware modifications which permitted more rapid access to the recorded data through improved numbering and indexing of such data. In addition, techniques are discussed for handling data from sources other than the ERIM M-5 and M-7 scanner systems.

  1. Targeted detection of murine colonic dysplasia in vivo with flexible multispectral scanning fiber endoscopy

    Science.gov (United States)

    Joshi, Bishnu P.; Miller, Sharon J.; Lee, Cameron; Gustad, Adam; Seibel, Eric J.; Wang, Thomas D.

    2012-02-01

    We demonstrate a multi-spectral scanning fiber endoscope (SFE) that collects fluorescence images in vivo from three target peptides that bind specifically to murine colonic adenomas. This ultrathin endoscope was demonstrated in a genetically engineered mouse model of spontaneous colorectal adenomas based on somatic Apc (adenomatous polyposis coli) gene inactivation. The SFE delivers excitation at 440, 532, 635 nm with human patients by simultaneously visualizing multiple over expressed molecular targets unique to dysplasia.

  2. Near-infrared multispectral photoacoustic microscopy using a graded-index fiber amplifier

    Directory of Open Access Journals (Sweden)

    Takashi Buma

    2016-09-01

    Full Text Available We demonstrate optical resolution photoacoustic microscopy (OR-PAM of lipid-rich tissue using a multi-wavelength pulsed laser based on nonlinear fiber optics. 1047 nm laser pulses are converted to 1098, 1153, 1215, and 1270 nm pulses via stimulated Raman scattering in a graded-index multimode fiber. Multispectral PAM of a lipid phantom is demonstrated with our low-cost and simple technique.

  3. Pseudo colour visualization of fused multispectral laser scattering images for optical diagnosis of rheumatoid arthritis

    Science.gov (United States)

    Zabarylo, U.; Minet, O.

    2010-01-01

    Investigations on the application of optical procedures for the diagnosis of rheumatism using scattered light images are only at the beginning both in terms of new image-processing methods and subsequent clinical application. For semi-automatic diagnosis using laser light, the multispectral scattered light images are registered and overlapped to pseudo-coloured images, which depict diagnostically essential contents by visually highlighting pathological changes.

  4. Application of principal component analysis to multispectral imaging data for evaluation of pigmented skin lesions

    Science.gov (United States)

    Jakovels, Dainis; Lihacova, Ilze; Kuzmina, Ilona; Spigulis, Janis

    2013-11-01

    Non-invasive and fast primary diagnostics of pigmented skin lesions is required due to frequent incidence of skin cancer - melanoma. Diagnostic potential of principal component analysis (PCA) for distant skin melanoma recognition is discussed. Processing of the measured clinical multi-spectral images (31 melanomas and 94 nonmalignant pigmented lesions) in the wavelength range of 450-950 nm by means of PCA resulted in 87 % sensitivity and 78 % specificity for separation between malignant melanomas and pigmented nevi.

  5. Science Applications of a Multispectral Microscopic Imager for the Astrobiological Exploration of Mars

    Science.gov (United States)

    Farmer, Jack D.; Sellar, R. Glenn; Swayze, Gregg A.; Blaney, Diana L.

    2014-01-01

    Abstract Future astrobiological missions to Mars are likely to emphasize the use of rovers with in situ petrologic capabilities for selecting the best samples at a site for in situ analysis with onboard lab instruments or for caching for potential return to Earth. Such observations are central to an understanding of the potential for past habitable conditions at a site and for identifying samples most likely to harbor fossil biosignatures. The Multispectral Microscopic Imager (MMI) provides multispectral reflectance images of geological samples at the microscale, where each image pixel is composed of a visible/shortwave infrared spectrum ranging from 0.46 to 1.73 μm. This spectral range enables the discrimination of a wide variety of rock-forming minerals, especially Fe-bearing phases, and the detection of hydrated minerals. The MMI advances beyond the capabilities of current microimagers on Mars by extending the spectral range into the infrared and increasing the number of spectral bands. The design employs multispectral light-emitting diodes and an uncooled indium gallium arsenide focal plane array to achieve a very low mass and high reliability. To better understand and demonstrate the capabilities of the MMI for future surface missions to Mars, we analyzed samples from Mars-relevant analog environments with the MMI. Results indicate that the MMI images faithfully resolve the fine-scale microtextural features of samples and provide important information to help constrain mineral composition. The use of spectral endmember mapping reveals the distribution of Fe-bearing minerals (including silicates and oxides) with high fidelity, along with the presence of hydrated minerals. MMI-based petrogenetic interpretations compare favorably with laboratory-based analyses, revealing the value of the MMI for future in situ rover-mediated astrobiological exploration of Mars. Key Words: Mars—Microscopic imager—Multispectral imaging

  6. [A Method to Reconstruct Surface Reflectance Spectrum from Multispectral Image Based on Canopy Radiation Transfer Model].

    Science.gov (United States)

    Zhao, Yong-guang; Ma, Ling-ling; Li, Chuan-rong; Zhu, Xiao-hua; Tang, Ling-li

    2015-07-01

    Due to the lack of enough spectral bands for multi-spectral sensor, it is difficult to reconstruct surface retlectance spectrum from finite spectral information acquired by multi-spectral instrument. Here, taking into full account of the heterogeneity of pixel from remote sensing image, a method is proposed to simulate hyperspectral data from multispectral data based on canopy radiation transfer model. This method first assumes the mixed pixels contain two types of land cover, i.e., vegetation and soil. The sensitive parameters of Soil-Leaf-Canopy (SLC) model and a soil ratio factor were retrieved from multi-spectral data based on Look-Up Table (LUT) technology. Then, by combined with a soil ratio factor, all the parameters were input into the SLC model to simulate the surface reflectance spectrum from 400 to 2 400 nm. Taking Landsat Enhanced Thematic Mapper Plus (ETM+) image as reference image, the surface reflectance spectrum was simulated. The simulated reflectance spectrum revealed different feature information of different surface types. To test the performance of this method, the simulated reflectance spectrum was convolved with the Landsat ETM + spectral response curves and Moderate Resolution Imaging Spectrometer (MODIS) spectral response curves to obtain the simulated Landsat ETM+ and MODIS image. Finally, the simulated Landsat ETM+ and MODIS images were compared with the observed Landsat ETM+ and MODIS images. The results generally showed high correction coefficients (Landsat: 0.90-0.99, MODIS: 0.74-0.85) between most simulated bands and observed bands and indicated that the simulated reflectance spectrum was well simulated and reliable.

  7. An overview for the application of multispectral device for determination of alkaloid level in dioscorea hispida

    OpenAIRE

    Syazili Roslan; Mohd Hudzari Haji Razali; Wan Ishak Wan Ismail

    2012-01-01

    Recently with development of computer imaging, the application field of near infrared image processing becomes much wider. The potential of machine vision application in the determination of alkaloid in Dioscorea hispida rhizome was explored. A camera vision system used in this research is TETRACAM multispectral camera, which consists of three bands, namely red band (R), green band (G) and near infrared band (NIR). The first component is the hardware component that functions as an image acqui...

  8. Science applications of a multispectral microscopic imager for the astrobiological exploration of Mars.

    Science.gov (United States)

    Núñez, Jorge I; Farmer, Jack D; Sellar, R Glenn; Swayze, Gregg A; Blaney, Diana L

    2014-02-01

    Future astrobiological missions to Mars are likely to emphasize the use of rovers with in situ petrologic capabilities for selecting the best samples at a site for in situ analysis with onboard lab instruments or for caching for potential return to Earth. Such observations are central to an understanding of the potential for past habitable conditions at a site and for identifying samples most likely to harbor fossil biosignatures. The Multispectral Microscopic Imager (MMI) provides multispectral reflectance images of geological samples at the microscale, where each image pixel is composed of a visible/shortwave infrared spectrum ranging from 0.46 to 1.73 μm. This spectral range enables the discrimination of a wide variety of rock-forming minerals, especially Fe-bearing phases, and the detection of hydrated minerals. The MMI advances beyond the capabilities of current microimagers on Mars by extending the spectral range into the infrared and increasing the number of spectral bands. The design employs multispectral light-emitting diodes and an uncooled indium gallium arsenide focal plane array to achieve a very low mass and high reliability. To better understand and demonstrate the capabilities of the MMI for future surface missions to Mars, we analyzed samples from Mars-relevant analog environments with the MMI. Results indicate that the MMI images faithfully resolve the fine-scale microtextural features of samples and provide important information to help constrain mineral composition. The use of spectral endmember mapping reveals the distribution of Fe-bearing minerals (including silicates and oxides) with high fidelity, along with the presence of hydrated minerals. MMI-based petrogenetic interpretations compare favorably with laboratory-based analyses, revealing the value of the MMI for future in situ rover-mediated astrobiological exploration of Mars. Mars-Microscopic imager-Multispectral imaging-Spectroscopy-Habitability-Arm instrument.

  9. USING PASSIVE AND ACTIVE MULTISPECTRAL SENSORS ON THE CORRELATION WITH THE PHENOLOGICAL INDICES OF COTTON

    OpenAIRE

    Souza, Heloisa B.; Baio, Fabio H. R.; Neves, Danilo C.

    2017-01-01

    ABSTRACT: The investment in precision agriculture technologies has been growing as well the investment in vegetation index sensors with different types of data collection. This study aimed to evaluate the NDVI potential use obtained from passive and active multispectral sensors as phenological parameters indicator of cotton growth. The experiment was conducted in cultivated cotton fields during the harvest seasons of 2013/14 and 2014/15. The phenological variables analyzed in the field, were ...

  10. Estimation of Critical Parameters in Concrete Production Using Multispectral Vision Technology

    DEFF Research Database (Denmark)

    Hansen, Michael Edberg; Ersbøll, Bjarne Kjær; Carstensen, Jens Michael

    2005-01-01

    We analyze multispectral reflectance images of concrete aggregate material, and design computational measures of the important and critical parameters used in concrete production. The features extracted from the images are exploited as explanatory variables in regression models and used to predict...... aggregate type, water content, and size distribution. We analyze and validate the methods on five representative aggregate types, commonly used in concrete production. Using cross validation, the generated models proves to have a high performance in predicting all of the critical parameters....

  11. A Comparative Performance Analysis of Multispectral and RGB Imaging on HER2 Status Evaluation for the Prediction of Breast Cancer Prognosis.

    Science.gov (United States)

    Liu, Wenlou; Wang, Linwei; Liu, Jiuyang; Yuan, Jingping; Chen, Jiamei; Wu, Han; Xiang, Qingming; Yang, Guifang; Li, Yan

    2016-12-01

    Despite the extensive application of multispectral imaging (MSI) in biomedical multidisciplinary researches, there is a paucity of data available regarding the implication of MSI in tumor prognosis prediction. We compared the behaviors of multispectral (MS) and conventional red-green-blue (RGB) images on assessment of human epidermal growth factor receptor 2 (HER2) immunohistochemistry to explore their impact on outcome in patients with invasive breast cancer (BC). Tissue microarrays containing 240 BC patients were introduced to compare the performance of MS and RGB imaging methods on the quantitative assessment of HER2 status and the prognostic value of 5-year disease-free survival (5-DFS). Both the total and average signal optical density values of HER2 MS and RGB images were analyzed, and all patients were divided into two groups based on the different 5-DFS. The quantification of HER2 MS images was negatively correlated with 5-DFS in lymph node-negative and -positive patients (Panalysis indicated that the hazard ratio (HR) of HER2 MS was higher than that of HER2 RGB (HR=2.454; 95% confidence interval [CI], 1.636-3.681 vs HR=2.060; 95% CI, 1.361-3.119). Additionally, area under curve (AUC) by receiver operating characteristic analysis for HER2 MS was greater than that for HER2 RGB (AUC=0.649; 95% CI, 0.577-0.722 vs AUC=0.596; 95% CI, 0.522-0.670) in predicting the risk for recurrence. More importantly, the quantification of HER2 MS images has higher prediction accuracy than that of HER2 RGB images (69.6% vs 65.0%) on 5-DFS. Our study suggested that better information on BC prognosis could be obtained from the quantification of HER2 MS images and MS images might perform better in predicting BC prognosis than conventional RGB images. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

  12. A multispectral photon-counting double random phase encoding scheme for image authentication.

    Science.gov (United States)

    Yi, Faliu; Moon, Inkyu; Lee, Yeon H

    2014-05-20

    In this paper, we propose a new method for color image-based authentication that combines multispectral photon-counting imaging (MPCI) and double random phase encoding (DRPE) schemes. The sparsely distributed information from MPCI and the stationary white noise signal from DRPE make intruder attacks difficult. In this authentication method, the original multispectral RGB color image is down-sampled into a Bayer image. The three types of color samples (red, green and blue color) in the Bayer image are encrypted with DRPE and the amplitude part of the resulting image is photon counted. The corresponding phase information that has nonzero amplitude after photon counting is then kept for decryption. Experimental results show that the retrieved images from the proposed method do not visually resemble their original counterparts. Nevertheless, the original color image can be efficiently verified with statistical nonlinear correlations. Our experimental results also show that different interpolation algorithms applied to Bayer images result in different verification effects for multispectral RGB color images.

  13. Digital simulation of staining in histopathology multispectral images: enhancement and linear transformation of spectral transmittance.

    Science.gov (United States)

    Bautista, Pinky A; Yagi, Yukako

    2012-05-01

    Hematoxylin and eosin (H&E) stain is currently the most popular for routine histopathology staining. Special and/or immuno-histochemical (IHC) staining is often requested to further corroborate the initial diagnosis on H&E stained tissue sections. Digital simulation of staining (or digital staining) can be a very valuable tool to produce the desired stained images from the H&E stained tissue sections instantaneously. We present an approach to digital staining of histopathology multispectral images by combining the effects of spectral enhancement and spectral transformation. Spectral enhancement is accomplished by shifting the N-band original spectrum of the multispectral pixel with the weighted difference between the pixel's original and estimated spectrum; the spectrum is estimated using M transformed to the spectral configuration associated to its reaction to a specific stain by utilizing an N × N transformation matrix, which is derived through application of least mean squares method to the enhanced and target spectral transmittance samples of the different tissue components found in the image. Results of our experiments on the digital conversion of an H&E stained multispectral image to its Masson's trichrome stained equivalent show the viability of the method.

  14. A Multispectral Photon-Counting Double Random Phase Encoding Scheme for Image Authentication

    Directory of Open Access Journals (Sweden)

    Faliu Yi

    2014-05-01

    Full Text Available In this paper, we propose a new method for color image-based authentication that combines multispectral photon-counting imaging (MPCI and double random phase encoding (DRPE schemes. The sparsely distributed information from MPCI and the stationary white noise signal from DRPE make intruder attacks difficult. In this authentication method, the original multispectral RGB color image is down-sampled into a Bayer image. The three types of color samples (red, green and blue color in the Bayer image are encrypted with DRPE and the amplitude part of the resulting image is photon counted. The corresponding phase information that has nonzero amplitude after photon counting is then kept for decryption. Experimental results show that the retrieved images from the proposed method do not visually resemble their original counterparts. Nevertheless, the original color image can be efficiently verified with statistical nonlinear correlations. Our experimental results also show that different interpolation algorithms applied to Bayer images result in different verification effects for multispectral RGB color images.

  15. Capability Assessment and Performance Metrics for the Titan Multispectral Mapping Lidar

    Directory of Open Access Journals (Sweden)

    Juan Carlos Fernandez-Diaz

    2016-11-01

    Full Text Available In this paper we present a description of a new multispectral airborne mapping light detection and ranging (lidar along with performance results obtained from two years of data collection and test campaigns. The Titan multiwave lidar is manufactured by Teledyne Optech Inc. (Toronto, ON, Canada and emits laser pulses in the 1550, 1064 and 532 nm wavelengths simultaneously through a single oscillating mirror scanner at pulse repetition frequencies (PRF that range from 50 to 300 kHz per wavelength (max combined PRF of 900 kHz. The Titan system can perform simultaneous mapping in terrestrial and very shallow water environments and its multispectral capability enables new applications, such as the production of false color active imagery derived from the lidar return intensities and the automated classification of target and land covers. Field tests and mapping projects performed over the past two years demonstrate capabilities to classify five land covers in urban environments with an accuracy of 90%, map bathymetry under more than 15 m of water, and map thick vegetation canopies at sub-meter vertical resolutions. In addition to its multispectral and performance characteristics, the Titan system is designed with several redundancies and diversity schemes that have proven to be beneficial for both operations and the improvement of data quality.

  16. Compression of Multispectral Images with Comparatively Few Bands Using Posttransform Tucker Decomposition

    Directory of Open Access Journals (Sweden)

    Jin Li

    2014-01-01

    Full Text Available Up to now, data compression for the multispectral charge-coupled device (CCD images with comparatively few bands (MSCFBs is done independently on each multispectral channel. This compression codec is called a “monospectral compressor.” The monospectral compressor does not have a removing spectral redundancy stage. To fill this gap, we propose an efficient compression approach for MSCFBs. In our approach, the one dimensional discrete cosine transform (1D-DCT is performed on spectral dimension to exploit the spectral information, and the posttransform (PT in 2D-DWT domain is performed on each spectral band to exploit the spatial information. A deep coupling approach between the PT and Tucker decomposition (TD is proposed to remove residual spectral redundancy between bands and residual spatial redundancy of each band. Experimental results on multispectral CCD camera data set show that the proposed compression algorithm can obtain a better compression performance and significantly outperforms the traditional compression algorithm-based TD in 2D-DWT and 3D-DCT domain.

  17. High performance multi-spectral interrogation for surface plasmon resonance imaging sensors.

    Science.gov (United States)

    Sereda, A; Moreau, J; Canva, M; Maillart, E

    2014-04-15

    Surface plasmon resonance (SPR) sensing has proven to be a valuable tool in the field of surface interactions characterization, especially for biomedical applications where label-free techniques are of particular interest. In order to approach the theoretical resolution limit, most SPR-based systems have turned to either angular or spectral interrogation modes, which both offer very accurate real-time measurements, but at the expense of the 2-dimensional imaging capability, therefore decreasing the data throughput. In this article, we show numerically and experimentally how to combine the multi-spectral interrogation technique with 2D-imaging, while finding an optimum in terms of resolution, accuracy, acquisition speed and reduction in data dispersion with respect to the classical reflectivity interrogation mode. This multi-spectral interrogation methodology is based on a robust five parameter fitting of the spectral reflectivity curve which enables monitoring of the reflectivity spectral shift with a resolution of the order of ten picometers, and using only five wavelength measurements per point. In fine, such multi-spectral based plasmonic imaging system allows biomolecular interaction monitoring in a linear regime independently of variations of buffer optical index, which is illustrated on a DNA-DNA model case. © 2013 Elsevier B.V. All rights reserved.

  18. METHOD OF RADIOMETRIC DISTORTION CORRECTION OF MULTISPECTRAL DATA FOR THE EARTH REMOTE SENSING

    Directory of Open Access Journals (Sweden)

    A. N. Grigoriev

    2015-07-01

    Full Text Available The paper deals with technologies of ground secondary processing of heterogeneous multispectral data. The factors of heterogeneous data include uneven illumination of objects on the Earth surface caused by different properties of the relief. A procedure for the image restoration of spectral channels by means of terrain distortion compensation is developed. The object matter of this paper is to improve the quality of the results during image restoration of areas with large and medium landforms. Methods. Researches are based on the elements of the digital image processing theory, statistical processing of the observation results and the theory of multi-dimensional arrays. Main Results. The author has introduced operations on multidimensional arrays: concatenation and elementwise division. Extended model description for input data about the area is given. The model contains all necessary data for image restoration. Correction method for multispectral data radiometric distortions of the Earth remote sensing has been developed. The method consists of two phases: construction of empirical dependences for spectral reflectance on the relief properties and restoration of spectral images according to semiempirical data. Practical Relevance. Research novelty lies in developme nt of the application theory of multidimensional arrays with respect to the processing of multispectral data, together with data on the topography and terrain objects. The results are usable for development of radiometric data correction tools. Processing is performed on the basis of a digital terrain model without carrying out ground works connected with research of the objects reflective properties.

  19. Nondestructive and intuitive determination of circadian chlorophyll rhythms in soybean leaves using multispectral imaging

    Science.gov (United States)

    Pan, Wen-Juan; Wang, Xia; Deng, Yong-Ren; Li, Jia-Hang; Chen, Wei; Chiang, John Y.; Yang, Jian-Bo; Zheng, Lei

    2015-01-01

    The circadian clock, synchronized by daily cyclic environmental cues, regulates diverse aspects of plant growth and development and increases plant fitness. Even though much is known regarding the molecular mechanism of circadian clock, it remains challenging to quantify the temporal variation of major photosynthesis products as well as their metabolic output in higher plants in a real-time, nondestructive and intuitive manner. In order to reveal the spatial-temporal scenarios of photosynthesis and yield formation regulated by circadian clock, multispectral imaging technique has been employed for nondestructive determination of circadian chlorophyll rhythms in soybean leaves. By utilizing partial least square regression analysis, the determination coefficients R2, 0.9483 for chlorophyll a and 0.8906 for chlorophyll b, were reached, respectively. The predicted chlorophyll contents extracted from multispectral data showed an approximately 24-h rhythm which could be entrained by external light conditions, consistent with the chlorophyll contents measured by chemical analyses. Visualization of chlorophyll map in each pixel offers an effective way to analyse spatial-temporal distribution of chlorophyll. Our results revealed the potentiality of multispectral imaging as a feasible nondestructive universal assay for examining clock function and robustness, as well as monitoring chlorophyll a and b and other biochemical components in plants. PMID:26059057

  20. Development of a Portable 3CCD Camera System for Multispectral Imaging of Biological Samples

    Science.gov (United States)

    Lee, Hoyoung; Park, Soo Hyun; Noh, Sang Ha; Lim, Jongguk; Kim, Moon S.

    2014-01-01

    Recent studies have suggested the need for imaging devices capable of multispectral imaging beyond the visible region, to allow for quality and safety evaluations of agricultural commodities. Conventional multispectral imaging devices lack flexibility in spectral waveband selectivity for such applications. In this paper, a recently developed portable 3CCD camera with significant improvements over existing imaging devices is presented. A beam-splitter prism assembly for 3CCD was designed to accommodate three interference filters that can be easily changed for application-specific multispectral waveband selection in the 400 to 1000 nm region. We also designed and integrated electronic components on printed circuit boards with firmware programming, enabling parallel processing, synchronization, and independent control of the three CCD sensors, to ensure the transfer of data without significant delay or data loss due to buffering. The system can stream 30 frames (3-waveband images in each frame) per second. The potential utility of the 3CCD camera system was demonstrated in the laboratory for detecting defect spots on apples. PMID:25350510

  1. An Approach for Unsupervised Change Detection in Multitemporal VHR Images Acquired by Different Multispectral Sensors

    Directory of Open Access Journals (Sweden)

    Yady Tatiana Solano-Correa

    2018-03-01

    Full Text Available This paper proposes an approach for the detection of changes in multitemporal Very High Resolution (VHR optical images acquired by different multispectral sensors. The proposed approach, which is inspired by a recent framework developed to support the design of change-detection systems for single-sensor VHR remote sensing images, addresses and integrates in the general approach a strategy to effectively deal with multisensor information, i.e., to perform change detection between VHR images acquired by different multispectral sensors on two dates. This is achieved by the definition of procedures for the homogenization of radiometric, spectral and geometric image properties. These procedures map images into a common feature space where the information acquired by different multispectral sensors becomes comparable across time. Although the approach is general, here we optimize it for the detection of changes in vegetation and urban areas by employing features based on linear transformations (Tasseled Caps and Orthogonal Equations, which are shown to be effective for representing the multisensor information in a homogeneous physical way irrespectively of the considered sensor. Experiments on multitemporal images acquired by different VHR satellite systems (i.e., QuickBird, WorldView-2 and GeoEye-1 confirm the effectiveness of the proposed approach.

  2. Scattering and absorption measurements of cervical tissues measures using low cost multi-spectral imaging

    Science.gov (United States)

    Bernat, Amir S.; Bar-Am, Kfir; Cataldo, Leigh; Bolton, Frank J.; Kahn, Bruce S.; Levitz, David

    2018-02-01

    Cervical cancer is a leading cause of death for women in low resource settings. In order to better detect cervical dysplasia, a low cost multi-spectral colposcope was developed utilizing low costs LEDs and an area scan camera. The device is capable of both traditional colposcopic imaging and multi-spectral image capture. Following initial bench testing, the device was deployed to a gynecology clinic where it was used to image patients in a colposcopy setting. Both traditional colposcopic images and spectral data from patients were uploaded to a cloud server for remote analysis. Multi-spectral imaging ( 30 second capture) took place before any clinical procedure; the standard of care was followed thereafter. If acetic acid was used in the standard of care, a post-acetowhitening colposcopic image was also captured. In analyzing the data, normal and abnormal regions were identified in the colposcopic images by an expert clinician. Spectral data were fit to a theoretical model based on diffusion theory, yielding information on scattering and absorption parameters. Data were grouped according to clinician labeling of the tissue, as well as any additional clinical test results available (Pap, HPV, biopsy). Altogether, N=20 patients were imaged in this study, with 9 of them abnormal. In comparing normal and abnormal regions of interest from patients, substantial differences were measured in blood content, while differences in oxygen saturation parameters were more subtle. These results suggest that optical measurements made using low cost spectral imaging systems can distinguish between normal and pathological tissues.

  3. Recovery of Forest Canopy Parameters by Inversion of Multispectral LiDAR Data

    Directory of Open Access Journals (Sweden)

    Andrew Wallace

    2012-02-01

    Full Text Available We describe the use of Bayesian inference techniques, notably Markov chain Monte Carlo (MCMC and reversible jump MCMC (RJMCMC methods, to recover forest structural and biochemical parameters from multispectral LiDAR (Light Detection and Ranging data. We use a variable dimension, multi-layered model to represent a forest canopy or tree, and discuss the recovery of structure and depth profiles that relate to photochemical properties. We first demonstrate how simple vegetation indices such as the Normalized Differential Vegetation Index (NDVI, which relates to canopy biomass and light absorption, and Photochemical Reflectance Index (PRI which is a measure of vegetation light use efficiency, can be measured from multispectral data. We further describe and demonstrate our layered approach on single wavelength real data, and on simulated multispectral data derived from real, rather than simulated, data sets. This evaluation shows successful recovery of a subset of parameters, as the complete recovery problem is ill-posed with the available data. We conclude that the approach has promise, and suggest future developments to address the current difficulties in parameter inversion.

  4. Unmixing chromophores in human skin with a 3D multispectral optoacoustic mesoscopy system

    Science.gov (United States)

    Schwarz, Mathias; Aguirre, Juan; Soliman, Dominik; Buehler, Andreas; Ntziachristos, Vasilis

    2016-03-01

    The absorption of visible light by human skin is governed by a number of natural chromophores: Eumelanin, pheomelanin, oxyhemoglobin, and deoxyhemoglobin are the major absorbers in the visible range in cutaneous tissue. Label-free quantification of these tissue chromophores is an important step of optoacoustic (photoacoustic) imaging towards clinical application, since it provides relevant information in diseases. In tumor cells, for instance, there are metabolic changes (Warburg effect) compared to healthy cells, leading to changes in oxygenation in the environment of tumors. In malignant melanoma changes in the absorption spectrum have been observed compared to the spectrum of nonmalignant nevi. So far, optoacoustic imaging has been applied to human skin mostly in single-wavelength mode, providing anatomical information but no functional information. In this work, we excited the tissue by a tunable laser source in the spectral range from 413-680 nm with a repetition rate of 50 Hz. The laser was operated in wavelengthsweep mode emitting consecutive pulses at various wavelengths that allowed for automatic co-registration of the multispectral datasets. The multispectral raster-scan optoacoustic mesoscopy (MSOM) system provides a lateral resolution of melanin, oxyhemoglobin, and deoxyhemoglobin, three-dimensional absorption maps of all three absorbers were calculated from the multispectral dataset.

  5. A comparison of autonomous techniques for multispectral image analysis and classification

    Science.gov (United States)

    Valdiviezo-N., Juan C.; Urcid, Gonzalo; Toxqui-Quitl, Carina; Padilla-Vivanco, Alfonso

    2012-10-01

    Multispectral imaging has given place to important applications related to classification and identification of objects from a scene. Because of multispectral instruments can be used to estimate the reflectance of materials in the scene, these techniques constitute fundamental tools for materials analysis and quality control. During the last years, a variety of algorithms has been developed to work with multispectral data, whose main purpose has been to perform the correct classification of the objects in the scene. The present study introduces a brief review of some classical as well as a novel technique that have been used for such purposes. The use of principal component analysis and K-means clustering techniques as important classification algorithms is here discussed. Moreover, a recent method based on the min-W and max-M lattice auto-associative memories, that was proposed for endmember determination in hyperspectral imagery, is introduced as a classification method. Besides a discussion of their mathematical foundation, we emphasize their main characteristics and the results achieved for two exemplar images conformed by objects similar in appearance, but spectrally different. The classification results state that the first components computed from principal component analysis can be used to highlight areas with different spectral characteristics. In addition, the use of lattice auto-associative memories provides good results for materials classification even in the cases where some spectral similarities appears in their spectral responses.

  6. A Direct and Fast Methodology for Ship Recognition in Sentinel-2 Multispectral Imagery

    Directory of Open Access Journals (Sweden)

    Henning Heiselberg

    2016-12-01

    Full Text Available The European Space Agency satellite Sentinel-2 provides multispectral images with pixel sizes down to 10 m. This high resolution allows for ship detection and recognition by determining a number of important ship parameters. We are able to show how a ship position, its heading, length and breadth can be determined down to a subpixel resolution. If the ship is moving, its velocity can also be determined from its Kelvin waves. The 13 spectrally different visual and infrared images taken using multispectral imagery (MSI are “fingerprints” that allow for the recognition and identification of ships. Furthermore, the multispectral image profiles along the ship allow for discrimination between the ship, its turbulent wakes, and the Kelvin waves, such that the ship’s length and breadth can be determined more accurately even when sailing. The ship’s parameters are determined by using satellite imagery taken from several ships, which are then compared to known values from the automatic identification system. The agreement is on the order of the pixel resolution or better.

  7. Panoramic, Macro and Micro Multispectral Imaging: An Affordable System for Mapping Pigments on Artworks

    Directory of Open Access Journals (Sweden)

    Antonino Cosentino

    2015-07-01

    Full Text Available Multispectral imaging systems are used in art examinations to map and identify pigments, binders and areas of retouching. A monochromatic camera is combined with an appropriate wavelength selection system and acquires a variable number of spectral images of a scene. These images are then stacked into a reflectance imaging cube to reconstruct reflectance spectra from each of the images’ pixels. This paper presents an affordable multispectral imaging system composed of a monochromatic CCD camera and a set of only 12 interference filters for mapping pigments on works of art and for the tentative identification of such pigments. This work demonstrates the versatility of this set-up, a versatility enabling it to be applied to different tasks, involving examination and documentation of objects of varying size. Use of this multispectral camera for both panoramic and macro photography is discussed, together with the possibilities facilitated from the coupling of the system to a stereomicroscope and a compound microscope. This system is of particular interest for the cultural heritage sector because of its hardware simplicity and acquisition speed, as well as its lightness and small dimensions.

  8. Hyperspectral and multispectral data fusion based on linear-quadratic nonnegative matrix factorization

    Science.gov (United States)

    Benhalouche, Fatima Zohra; Karoui, Moussa Sofiane; Deville, Yannick; Ouamri, Abdelaziz

    2017-04-01

    This paper proposes three multisharpening approaches to enhance the spatial resolution of urban hyperspectral remote sensing images. These approaches, related to linear-quadratic spectral unmixing techniques, use a linear-quadratic nonnegative matrix factorization (NMF) multiplicative algorithm. These methods begin by unmixing the observable high-spectral/low-spatial resolution hyperspectral and high-spatial/low-spectral resolution multispectral images. The obtained high-spectral/high-spatial resolution features are then recombined, according to the linear-quadratic mixing model, to obtain an unobservable multisharpened high-spectral/high-spatial resolution hyperspectral image. In the first designed approach, hyperspectral and multispectral variables are independently optimized, once they have been coherently initialized. These variables are alternately updated in the second designed approach. In the third approach, the considered hyperspectral and multispectral variables are jointly updated. Experiments, using synthetic and real data, are conducted to assess the efficiency, in spatial and spectral domains, of the designed approaches and of linear NMF-based approaches from the literature. Experimental results show that the designed methods globally yield very satisfactory spectral and spatial fidelities for the multisharpened hyperspectral data. They also prove that these methods significantly outperform the used literature approaches.

  9. Electrical double layer modulation of hybrid room temperature ionic liquid/aqueous buffer interface for enhanced sweat based biosensing.

    Science.gov (United States)

    Jagannath, Badrinath; Muthukumar, Sriram; Prasad, Shalini

    2018-08-03

    We have investigated the role of kosmotropic anionic moieties and chaotropic cationic moieties of room temperature hydrophilic ionic liquids in enhancing the biosensing performance of affinity based immunochemical biosensors in human sweat. Two ionic liquids, 1-butyl-3-methylimidazolium tetrafluoroborate (BMIM[BF 4 ]) and choline dihydrogen phosphate (Choline[DHP]) were investigated in this study with Choline[DHP] being more kosmotropic in nature having a more protein stabilizing effect based on the hofmeister series. Non-faradaic interfacial charge transfer has been employed as the mechanism for evaluating the formation and the biosensing of capture probe antibodies in room temperature ionic liquids (RTILs)/aqueous human sweat interface. The charge of the ionic moieties were utilized to form compact electrical double layers around the antibodies for enhancing the stability of the antibody capture probes, which was evaluated through zeta potential measurements. The zeta potential measurements indicated stability of antibodies due to electrostatic repulsion of the RTIL charged moieties encompassing the antibodies, thus preventing any aggregation. Here, we report for the first time of non-faradaic electrochemical impedance spectroscopy equivalent circuit model analysis for analyzing and interpreting affinity based biosensing at hybrid electrode/ionic liquid-aqueous sweat buffer interface guided by the choice of the ionic liquid. Interleukin-6 (IL-6) and cortisol two commonly occurring biomarkers in human sweat were evaluated using this method. The limit of detection (LOD) obtained using both ionic liquids for IL-6 was 0.2 pg mL -1 with cross-reactivity studies indicating better performance of IL-6 detection using Choline[DHP] and no response to cross-reactive molecule. The LOD of 0.1 ng/mL was achieved for cortisol and the cross-reactivity studies indicated that cortisol antibody in BMIM[BF 4 ] did not show any signal response to cross-reactive molecules

  10. Surface Acoustic Waves (SAW-Based Biosensing for Quantification of Cell Growth in 2D and 3D Cultures

    Directory of Open Access Journals (Sweden)

    Tao Wang

    2015-12-01

    Full Text Available Detection and quantification of cell viability and growth in two-dimensional (2D and three-dimensional (3D cell cultures commonly involve harvesting of cells and therefore requires a parallel set-up of several replicates for time-lapse or dose–response studies. Thus, developing a non-invasive and touch-free detection of cell growth in longitudinal studies of 3D tumor spheroid cultures or of stem cell regeneration remains a major unmet need. Since surface acoustic waves (SAWs permit mass loading-based biosensing and have been touted due to their many advantages including low cost, small size and ease of assembly, we examined the potential of SAW-biosensing to detect and quantify cell growth. Herein, we demonstrate that a shear horizontal-surface acoustic waves (SH-SAW device comprising two pairs of resonators consisting of interdigital transducers and reflecting fingers can be used to quantify mass loading by the cells in suspension as well as within a 3D cell culture platform. A 3D COMSOL model was built to simulate the mass loading response of increasing concentrations of cells in suspension in the polydimethylsiloxane (PDMS well in order to predict the characteristics and optimize the design of the SH-SAW biosensor. The simulated relative frequency shift from the two oscillatory circuit systems (one of which functions as control were found to be concordant to experimental data generated with RAW264.7 macrophage and A549 cancer cells. In addition, results showed that SAW measurements per se did not affect viability of cells. Further, SH-SAW biosensing was applied to A549 cells cultured on a 3D electrospun nanofiber scaffold that generate tumor spheroids (tumoroids and the results showed the device's ability to detect changes in tumor spheroid growth over the course of eight days. Taken together, these results demonstrate the use of SH-SAW device for detection and quantification of cell growth changes over time in 2D suspension cultures and in

  11. Surface Acoustic Waves (SAW)-Based Biosensing for Quantification of Cell Growth in 2D and 3D Cultures.

    Science.gov (United States)

    Wang, Tao; Green, Ryan; Nair, Rajesh Ramakrishnan; Howell, Mark; Mohapatra, Subhra; Guldiken, Rasim; Mohapatra, Shyam Sundar

    2015-12-19

    Detection and quantification of cell viability and growth in two-dimensional (2D) and three-dimensional (3D) cell cultures commonly involve harvesting of cells and therefore requires a parallel set-up of several replicates for time-lapse or dose-response studies. Thus, developing a non-invasive and touch-free detection of cell growth in longitudinal studies of 3D tumor spheroid cultures or of stem cell regeneration remains a major unmet need. Since surface acoustic waves (SAWs) permit mass loading-based biosensing and have been touted due to their many advantages including low cost, small size and ease of assembly, we examined the potential of SAW-biosensing to detect and quantify cell growth. Herein, we demonstrate that a shear horizontal-surface acoustic waves (SH-SAW) device comprising two pairs of resonators consisting of interdigital transducers and reflecting fingers can be used to quantify mass loading by the cells in suspension as well as within a 3D cell culture platform. A 3D COMSOL model was built to simulate the mass loading response of increasing concentrations of cells in suspension in the polydimethylsiloxane (PDMS) well in order to predict the characteristics and optimize the design of the SH-SAW biosensor. The simulated relative frequency shift from the two oscillatory circuit systems (one of which functions as control) were found to be concordant to experimental data generated with RAW264.7 macrophage and A549 cancer cells. In addition, results showed that SAW measurements per se did not affect viability of cells. Further, SH-SAW biosensing was applied to A549 cells cultured on a 3D electrospun nanofiber scaffold that generate tumor spheroids (tumoroids) and the results showed the device's ability to detect changes in tumor spheroid growth over the course of eight days. Taken together, these results demonstrate the use of SH-SAW device for detection and quantification of cell growth changes over time in 2D suspension cultures and in 3D cell

  12. SCREEN-PRINTED TYROSINASE-CONTAINING ELECTRODES FOR THE BIOSENSING OF ENZYME INHIBITORS

    Science.gov (United States)

    Disposal amperometric inhibition biosensors have been microfabricated by screen printing a tyrosinase-containing carbon ink. The decrease in the substrate (catechol) steady-state current, caused by the addition of various pesticides and herbicides, offers convenient quantitation ...

  13. Supramolecular assembly affording a ratiometric two-photon fluorescent nanoprobe for quantitative detection and bioimaging.

    Science.gov (United States)

    Wang, Peng; Zhang, Cheng; Liu, Hong-Wen; Xiong, Mengyi; Yin, Sheng-Yan; Yang, Yue; Hu, Xiao-Xiao; Yin, Xia; Zhang, Xiao-Bing; Tan, Weihong

    2017-12-01

    Fluorescence quantitative analyses for vital biomolecules are in great demand in biomedical science owing to their unique detection advantages with rapid, sensitive, non-damaging and specific identification. However, available fluorescence strategies for quantitative detection are usually hard to design and achieve. Inspired by supramolecular chemistry, a two-photon-excited fluorescent supramolecular nanoplatform ( TPSNP ) was designed for quantitative analysis with three parts: host molecules (β-CD polymers), a guest fluorophore of sensing probes (Np-Ad) and a guest internal reference (NpRh-Ad). In this strategy, the TPSNP possesses the merits of (i) improved water-solubility and biocompatibility; (ii) increased tissue penetration depth for bioimaging by two-photon excitation; (iii) quantitative and tunable assembly of functional guest molecules to obtain optimized detection conditions; (iv) a common approach to avoid the limitation of complicated design by adjustment of sensing probes; and (v) accurate quantitative analysis by virtue of reference molecules. As a proof-of-concept, we utilized the two-photon fluorescent probe NHS-Ad-based TPSNP-1 to realize accurate quantitative analysis of hydrogen sulfide (H 2 S), with high sensitivity and good selectivity in live cells, deep tissues and ex vivo -dissected organs, suggesting that the TPSNP is an ideal quantitative indicator for clinical samples. What's more, TPSNP will pave the way for designing and preparing advanced supramolecular sensors for biosensing and biomedicine.

  14. Exploiting physical constraints for multi-spectral exo-planet detection

    Science.gov (United States)

    Thiébaut, Éric; Devaney, Nicholas; Langlois, Maud; Hanley, Kenneth

    2016-07-01

    We derive a physical model of the on-axis PSF for a high contrast imaging system such as GPI or SPHERE. This model is based on a multi-spectral Taylor series expansion of the diffraction pattern and predicts that the speckles should be a combination of spatial modes with deterministic chromatic magnification and weighting. We propose to remove most of the residuals by fitting this model on a set of images at multiple wavelengths and times. On simulated data, we demonstrate that our approach achieves very good speckle suppression without additional heuristic parameters. The residual speckles1, 2 set the most serious limitation in the detection of exo-planets in high contrast coronographic images provided by instruments such as SPHERE3 at the VLT, GPI4, 5 at Gemini, or SCExAO6 at Subaru. A number of post-processing methods have been proposed to remove as much as possible of the residual speckles while preserving the signal from the planets. These methods exploit the fact that the speckles and the planetary signal have different temporal and spectral behaviors. Some methods like LOCI7 are based on angular differential imaging8 (ADI), spectral differential imaging9, 10 (SDI), or on a combination of ADI and SDI.11 Instead of working on image differences, we propose to tackle the exo-planet detection as an inverse problem where a model of the residual speckles is fit on the set of multi-spectral images and, possibly, multiple exposures. In order to reduce the number of degrees of freedom, we impose specific constraints on the spatio-spectral distribution of stellar speckles. These constraints are deduced from a multi-spectral Taylor series expansion of the diffraction pattern for an on-axis source which implies that the speckles are a combination of spatial modes with deterministic chromatic magnification and weighting. Using simulated data, the efficiency of speckle removal by fitting the proposed multi-spectral model is compared to the result of using an approximation

  15. Comparing Individual Tree Segmentation Based on High Resolution Multispectral Image and Lidar Data

    Science.gov (United States)

    Xiao, P.; Kelly, M.; Guo, Q.

    2014-12-01

    This study compares the use of high-resolution multispectral WorldView images and high density Lidar data for individual tree segmentation. The application focuses on coniferous and deciduous forests in the Sierra Nevada Mountains. The tree objects are obtained in two ways: a hybrid region-merging segmentation method with multispectral images, and a top-down and bottom-up region-growing method with Lidar data. The hybrid region-merging method is used to segment individual tree from multispectral images. It integrates the advantages of global-oriented and local-oriented region-merging strategies into a unified framework. The globally most-similar pair of regions is used to determine the starting point of a growing region. The merging iterations are constrained within the local vicinity, thus the segmentation is accelerated and can reflect the local context. The top-down region-growing method is adopted in coniferous forest to delineate individual tree from Lidar data. It exploits the spacing between the tops of trees to identify and group points into a single tree based on simple rules of proximity and likely tree shape. The bottom-up region-growing method based on the intensity and 3D structure of Lidar data is applied in deciduous forest. It segments tree trunks based on the intensity and topological relationships of the points, and then allocate other points to exact tree crowns according to distance. The accuracies for each method are evaluated with field survey data in several test sites, covering dense and sparse canopy. Three types of segmentation results are produced: true positive represents a correctly segmented individual tree, false negative represents a tree that is not detected and assigned to a nearby tree, and false positive represents that a point or pixel cluster is segmented as a tree that does not in fact exist. They respectively represent correct-, under-, and over-segmentation. Three types of index are compared for segmenting individual tree

  16. The Huber’s Method-based Gas Concentration Reconstruction in Multicomponent Gas Mixtures from Multispectral Laser Measurements under Noise Overshoot Conditions

    Directory of Open Access Journals (Sweden)

    V. A. Gorodnichev

    2016-01-01

    Full Text Available Laser gas analysers are the most promising for the rapid quantitative analysis of gaseous air pollution. A laser gas analysis problem is that there are instable results in reconstruction of gas mixture components concentration under real noise in the recorded laser signal. This necessitates using the special processing algorithms. When reconstructing the quantitative composition of multi-component gas mixtures from the multispectral laser measurements are efficiently used methods such as Tikhonov regularization, quasi-solution search, and finding of Bayesian estimators. These methods enable using the single measurement results to determine the quantitative composition of gas mixtures under measurement noise. In remote sensing the stationary gas formations or in laboratory analysis of the previously selected (when the gas mixture is stationary air samples the reconstruction procedures under measurement noise of gas concentrations in multicomponent mixtures can be much simpler. The paper considers a problem of multispectral laser analysis of stationary gas mixtures for which it is possible to conduct a series of measurements. With noise overshoots in the recorded laser signal (and, consequently, overshoots of gas concentrations determined by a single measurement must be used stable (robust estimation techniques for substantial reducing an impact of the overshoots on the estimate of required parameters. The paper proposes the Huber method to determine gas concentrations in multicomponent mixtures under signal overshoot. To estimate the value of Huber parameter and the efficiency of Huber's method to find the stable estimates of gas concentrations in multicomponent stationary mixtures from the laser measurements the mathematical modelling was conducted. Science & Education of the Bauman MSTU 108 The mathematical modelling results show that despite the considerable difference among the errors of the mixture gas components themselves a character of

  17. Enhanced processing of SPOT multispectral satellite imagery for environmental monitoring and modelling

    Energy Technology Data Exchange (ETDEWEB)

    Clark, B.

    2010-07-01

    The Taita Hills in southeastern Kenya form the northernmost part of Africa's Eastern Arc Mountains, which have been identified by Conservation International as one of the top ten biodiversity hotspots on Earth. As with many areas of the developing world, over recent decades the Taita Hills have experienced significant population growth leading to associated major changes in land use and land cover (LULC), as well as escalating land degradation, particularly soil erosion. Multi-temporal medium resolution multispectral optical satellite data, such as imagery from the SPOT HRV, HRVIR, and HRG sensors, provides a valuable source of information for environmental monitoring and modelling at a landscape level at local and regional scales. However, utilization of multi-temporal SPOT data in quantitative remote sensing studies requires the removal of atmospheric effects and the derivation of surface reflectance factor (rho{sub s}). Furthermore, for areas of rugged terrain, such as the Taita Hills, topographic correction is necessary to derive comparable (rho{sub s}) throughout a SPOT scene. Reliable monitoring of LULC change over time and modelling of land degradation and human population distribution and abundance are of crucial importance to sustainable development, natural resource management, biodiversity conservation, and understanding and mitigating climate change and its impacts. The main purpose of this thesis was to develop and validate enhanced processing of SPOT satellite imagery for use in environmental monitoring and modelling at a landscape level, in regions of the developing world with limited ancillary data availability. The Taita Hills formed the application study site, whilst the Helsinki metropolitan region was used as a control site for validation and assessment of the applied atmospheric correction techniques, where multiangular (rho{sub s}) field measurements were taken and where horizontal visibility meteorological data concurrent with image

  18. Optical Microbubble Resonators with High Refractive Index Inner Coating for Bio-Sensing Applications: An Analytical Approach

    Directory of Open Access Journals (Sweden)

    Andrea Barucci

    2016-11-01

    Full Text Available The design of Whispering Gallery Mode Resonators (WGMRs used as an optical transducer for biosensing represents the first and crucial step towards the optimization of the final device performance in terms of sensitivity and Limit of Detection (LoD. Here, we propose an analytical method for the design of an optical microbubble resonator (OMBR-based biosensor. In order to enhance the OMBR sensing performance, we consider a polymeric layer of high refractive index as an inner coating for the OMBR. The effect of this layer and other optical/geometrical parameters on the mode field distribution, sensitivity and LoD of the OMBR is assessed and discussed, both for transverse electric (TE and transverse magnetic (TM polarization. The obtained results do provide physical insights for the development of OMBR-based biosensor.

  19. Surface-enhanced localized surface plasmon resonance biosensing of avian influenza DNA hybridization using subwavelength metallic nanoarrays

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Shin Ae; Jang, Sung Min; Kim, Sung June [School of Electrical Engineering and Computer Science, Seoul National University, Seoul 151-742 (Korea, Republic of); Byun, Kyung Min [Department of Biomedical Engineering, Kyung Hee University, Yongin 446-701 (Korea, Republic of); Kim, Kyujung; Kim, Donghyun [Program of Nanomedical Science and Technology, Yonsei University, Seoul 120-749 (Korea, Republic of); Ma, Kyungjae; Oh, Youngjin [School of Electrical and Electronic Engineering, Yonsei University, Seoul 120-749 (Korea, Republic of); Kim, Sung Guk [College of Veterinary Medicine, Cornell University, Ithaca, New York 14853 (United States); Shuler, Michael L, E-mail: kmbyun@khu.ac.kr [Department of Biomedical Engineering, Cornell University, Ithaca, New York 14853 (United States)

    2010-09-03

    We demonstrated enhanced localized surface plasmon resonance (SPR) biosensing based on subwavelength gold nanoarrays built on a thin gold film. Arrays of nanogratings (1D) and nanoholes (2D) with a period of 200 nm were fabricated by electron-beam lithography and used for the detection of avian influenza DNA hybridization. Experimental results showed that both nanoarrays provided significant sensitivity improvement and, especially, 1D nanogratings exhibited higher SPR signal amplification compared with 2D nanohole arrays. The sensitivity enhancement is associated with changes in surface-limited reaction area and strong interactions between bound molecules and localized plasmon fields. Our approach is expected to improve both the sensitivity and sensing resolution and can be applicable to label-free detection of DNA without amplification by polymerase chain reaction.

  20. A comparative study of graphene-hydrogel hybrid bionanocomposites for biosensing.

    Science.gov (United States)

    Burrs, S L; Vanegas, D C; Rong, Y; Bhargava, M; Mechulan, N; Hendershot, P; Yamaguchi, H; Gomes, C; McLamore, E S

    2015-03-07

    Hydrogels have become increasingly popular as immobilization materials for cells, enzymes and proteins for biosensing applications. Enzymatic biosensors that utilize hydrogel as an encapsulant have shown improvements over other immobilization techniques such as cross linking and covalent bonding. However, to date there are no studies which directly compare multiple hydrogel-graphene nanocomposites using the same enzyme and test conditions. This study compares the performance of four different hydrogels used as protein encapsulants in a mediator-free biosensor based on graphene-nanometal-enzyme composites. Alcohol oxidase (AOx) was encapsulated in chitosan poly-N-isopropylacrylamide (PNIPAAM), silk fibroin or cellulose nanocrystals (CNC) hydrogels, and then spin coated onto a nanoplatinum-graphene modified electrode. The transduction mechanism for the biosensor was based on AOx-catalyzed oxidation of methanol to produce hydrogen peroxide. To isolate the effect(s) of stimulus response on biosensor behavior, all experiments were conducted at 25 °C and pH 7.10. Electroactive surface area (ESA), electrochemical impedance spectroscopy (EIS), sensitivity to methanol, response time, limit of detection, and shelf life were measured for each bionanocomposite. Chitosan and PNIPAAM had the highest sensitivity (0.46 ± 0.2 and 0.3 ± 0.1 μA mM(-1), respectively) and electroactive surface area (0.2 ± 0.06 and 0.2 ± 0.02 cm(2), respectively), as well as the fastest response time (4.3 ± 0.8 and 4.8 ± 1.1 s, respectively). Silk and CNC demonstrated lower sensitivity (0.09 ± 0.02 and 0.15 ± 0.03 μA mM(-1), respectively), lower electroactive surface area (0.12 ± 0.02 and 0.09 ± 0.03 cm(2), respectively), and longer response time (8.9 ± 2.1 and 6.3 ± 0.8 s, respectively). The high porosity of chitosan, PNIPAAM, and silk gels led to excellent transport, which was significantly better than CNC bionanocomposites. Electrochemical performance of CNC bionanocomposites were

  1. Polymeric bionanocomposite cast thin films with in situ laccase-catalyzed polymerization of dopamine for biosensing and biofuel cell applications.

    Science.gov (United States)

    Tan, Yueming; Deng, Wenfang; Li, Yunyong; Huang, Zhao; Meng, Yue; Xie, Qingji; Ma, Ming; Yao, Shouzhuo

    2010-04-22

    We report here on the facile preparation of polymer-enzyme-multiwalled carbon nanotubes (MWCNTs) cast films accompanying in situ laccase (Lac)-catalyzed polymerization for electrochemical biosensing and biofuel cell applications. Lac-catalyzed polymerization of dopamine (DA) as a new substrate was examined in detail by UV-vis spectroscopy, cyclic voltammetry, quartz crystal microbalance, and scanning electron microscopy. Casting the aqueous mixture of DA, Lac and MWCNTs on a glassy carbon electrode (GCE) yielded a robust polydopamine (PDA)-Lac-MWCNTs/GCE that can sense hydroquinone with 643 microA mM(-1) cm(-2) sensitivity and 20-nM detection limit (S/N = 3). The DA substrate yielded the best biosensing performance, as compared with aniline, o-phenylenediamine, or o-aminophenol as the substrate for similar Lac-catalyzed polymerization. Casting the aqueous mixture of DA, glucose oxidase (GOx), Lac, and MWCNTs on a Pt electrode yielded a robust PDA-GOx-Lac-MWCNTs/Pt electrode that exhibits glucose-detection sensitivity of 68.6 microA mM(-1) cm(-2). In addition, 2,2'-azinobis (3-ethylbenzothiazoline-6-sulfonate) diammonium salt (ABTS) was also coimmobilized to yield a PDA-Lac-MWCNTs-ABTS/GCE that can effectively catalyze the reduction of O(2), and it was successfully used as the biocathode of a membraneless glucose/O(2) biofuel cell (BFC) in pH 5.0 Britton-Robinson buffer. The proposed biomacromolecule-immobilization platform based on enzyme-catalyzed polymerization may be useful for preparing many other multifunctional polymeric bionanocomposites for wide applications.

  2. Plasma-treated polystyrene film that enhances binding efficiency for sensitive and label-free protein biosensing

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Bihong [National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing 100190 (China); Li, Shaopeng [National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing 100190 (China); Department of Chemistry, Tsinghua University, Beijing 100084 (China); Song, Lusheng [National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing 100190 (China); Yang, Mo; Zhou, Wenfei; Tyagi, Deependra [National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing 100190 (China); University of Chinese Academy of Sciences, Yuquan Rd., 19(A), Beijing 100049 (China); Zhu, Jinsong, E-mail: jizhu88@gmail.com [National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing 100190 (China)

    2015-08-01

    Highlights: • A simple and robust plasma-treated ultrathin polystyrene film surface was developed for protein biosensing. • The surface was optimized by evaluating up to 120 types of fabrication parameters with high-throughput analytical methods. • The optimized surface showed a 620% improvement of the protein detection signal and 210% protein binding per immobilized protein ligand compared with a self-assembled monolayer surface. - Abstract: A plasma-treated ultrathin polystyrene (PS) film surface was explored as a simple, robust, and low-cost surface chemistry solution for protein biosensing applications. This surface could dramatically improve the binding efficiency of the protein–protein interactions, which is defined as the binding signal per immobilized ligand. The PS-modified protein biosensor was readily fabricated by spin coating and plasma treatment. Various parameters for fabrication, including the concentration of the PS solution, rate of spin coating, and duration of plasma treatment, were systematically optimized based on the improvement of fluorescence signal yielded by the microfluidic network-aided fluorescence immunoassay. The performance of the label-free protein detection on the optimized surfaces was further evaluated by surface plasmon resonance imaging (SPRi). PS surfaces with optimal fabrication parameters exhibited up to an 620% enhancement of the protein binding response and approximately 210% of the protein binding per immobilized protein ligand compared with a self-assembled monolayer (SAM) surface of 11-mercapto undecanoic acid (MUA). The relationship between the fabrication parameters used and changes to the surface chemistry and the morphological properties were characterized with atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS), and Fourier transform infrared spectroscopy (FTIR). It was revealed that the morphological changes observed in the plasma-treated PS film were the dominant factor for the

  3. Diamond nanoparticles as a way to improve electron transfer in sol–gel L-lactate biosensing platforms

    Energy Technology Data Exchange (ETDEWEB)

    Briones, M.; Casero, E. [Departamento de Química Analítica y Análisis Instrumental, Facultad de Ciencias, c/Francisco Tomás y Valiente, No7, Campus de Excelencia de la Universidad Autónoma de Madrid, 28049 Madrid (Spain); Vázquez, L. [Instituto de Ciencia de Materiales de Madrid (CSIC), c/Sor Juana Inés de la Cruz No3, Campus de Excelencia de la Universidad Autónoma de Madrid, 28049 Madrid (Spain); Pariente, F.; Lorenzo, E. [Departamento de Química Analítica y Análisis Instrumental, Facultad de Ciencias, c/Francisco Tomás y Valiente, No7, Campus de Excelencia de la Universidad Autónoma de Madrid, 28049 Madrid (Spain); Petit-Domínguez, M.D., E-mail: mdolores.petit@uam.es [Departamento de Química Analítica y Análisis Instrumental, Facultad de Ciencias, c/Francisco Tomás y Valiente, No7, Campus de Excelencia de la Universidad Autónoma de Madrid, 28049 Madrid (Spain)

    2016-02-18

    In the present work, we have included for the first time diamond nanoparticles (DNPs) in a sol–gel matrix derived from (3-mercaptopropyl)-trimethoxysilane (MPTS) in order to improve electron transfer in a lactate oxidase (LOx) based electrochemical biosensing platform. Firstly, an exhaustive AFM study, including topographical, surface potential (KFM) and capacitance gradient (CG) measurements, of each step involved in the biosensing platform development was performed. The platform is based on gold electrodes (Au) modified with the sol–gel matrix (Au/MPTS) in which diamond nanoparticles (Au/MPTS/DNPs) and lactate oxidase (Au/MPTS/DNPs/LOx) have been included. For the sake of comparison, we have also characterized a gold electrode directly modified with DNPs (Au/DNPs). Secondly, the electrochemical behavior of a redox mediator (hydroxymethyl-ferrocene, HMF) was evaluated at the platforms mentioned above. The response of Au/MPTS/DNPs/LOx towards lactate was obtained. A linear concentration range from 0.053 mM to 1.6 mM, a sensitivity of 2.6 μA mM{sup −1} and a detection limit of 16 μM were obtained. These analytical properties are comparable to other biosensors, presenting also as advantages that DNPs are inexpensive, environment-friendly and easy-handled nanomaterials. Finally, the developed biosensor was applied for lactate determination in wine samples. - Highlights: • We have included for the first time diamond nanoparticles (DNPs) in a sol–gel matrix for developing lactate biosensors. • DNPs facilitate electron-transfer within the sol–gel network in electrochemical biosensors. • Lactate biosensors show good sensitivity, detection limit, reproducibility and stability.

  4. Integrated lab-on-chip biosensing systems based on magnetic particle actuation : a comprehensive review

    NARCIS (Netherlands)

    Reenen, van A.; Jong, de A.M.; Toonder, den J.M.J.; Prins, M.W.J.

    2014-01-01

    The demand for easy to use and cost effective medical technologies inspires scientists to develop inno-vative lab-on-chip technologies for in-vitro diagnostic testing. To fulfill the medical needs, the tests should be rapid, sensitive, quantitative, miniaturizable, and need to integrate all steps

  5. Real-time label-free quantitative fluorescence microscopy-based detection of ATP using a tunable fluorescent nano-aptasensor platform.

    Science.gov (United States)

    Shrivastava, Sajal; Sohn, Il-Yung; Son, Young-Min; Lee, Won-Il; Lee, Nae-Eung

    2015-12-14

    Although real-time label-free fluorescent aptasensors based on nanomaterials are increasingly recognized as a useful strategy for the detection of target biomolecules with high fidelity, the lack of an imaging-based quantitative measurement platform limits their implementation with biological samples. Here we introduce an ensemble strategy for a real-time label-free fluorescent graphene (Gr) aptasensor platform. This platform employs aptamer length-dependent tunability, thus enabling the reagentless quantitative detection of biomolecules through computational processing coupled with real-time fluorescence imaging data. We demonstrate that this strategy effectively delivers dose-dependent quantitative readouts of adenosine triphosphate (ATP) concentration on chemical vapor deposited (CVD) Gr and reduced graphene oxide (rGO) surfaces, thereby providing cytotoxicity assessment. Compared with conventional fluorescence spectrometry methods, our highly efficient, universally applicable, and rational approach will facilitate broader implementation of imaging-based biosensing platforms for the quantitative evaluation of a range of target molecules.

  6. A novel multispectral glacier mapping method and its performance in Greenland

    Science.gov (United States)

    Citterio, M.; Fausto, R. S.; Ahlstrom, A. P.; Andersen, S. B.

    2014-12-01

    Multispectral land surface classification methods are widely used for mapping glacier outlines. Significant post-classification manual editing is typically required, and mapping glacier outlines over larger regions remains a rather labour intensive task. In this contribution we introduce a novel method for mapping glacier outlines from multispectral satellite imagery, requiring only minor manual editing.Over the last decade GLIMS (Global Land Ice Measurements from Space) improved the availability of glacier outlines, and in 2012 the Randolph Glacier Inventory (RGI) attained global coverage by compiling existing and new data sources in the wake of the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC AR5). With the launch of Landsat 8 in 2013 and the upcoming ESA (European Space Agency) Sentinel 2 missions, the availability of multispectral imagery may grow faster than our ability to process it into timely and reliable glacier outline products. Improved automatic classification methods would enable a full exploitation of these new data sources.We outline the theoretical basis of the proposed classification algorithm, provide a step by step walk-through from raw imagery to finished ice cover grids and vector glacier outlines, and evaluate the performance of the new method in mapping the outlines of glaciers, ice caps and the Greenland Ice Sheet from Landsat 8 OLI imagery. The classification output is compared against manually digitized ice margin positions, the RGI vectors, and the PROMICE (Programme for Monitoring of the Greenland Ice Sheet) aerophotogrammetric map of Greenland ice masses over a sector of the Disko Island surge cluster in West Greenland, the Qassimiut ice sheet lobe in South Greenland, and the A.P. Olsen ice cap in NE Greenland.

  7. [Multispectral Radiation Algorithm Based on Emissivity Model Constraints for True Temperature Measurement].

    Science.gov (United States)

    Liang, Mei; Sun, Xiao-gang; Luan, Mei-sheng

    2015-10-01

    Temperature measurement is one of the important factors for ensuring product quality, reducing production cost and ensuring experiment safety in industrial manufacture and scientific experiment. Radiation thermometry is the main method for non-contact temperature measurement. The second measurement (SM) method is one of the common methods in the multispectral radiation thermometry. However, the SM method cannot be applied to on-line data processing. To solve the problems, a rapid inversion method for multispectral radiation true temperature measurement is proposed and constraint conditions of emissivity model are introduced based on the multispectral brightness temperature model. For non-blackbody, it can be drawn that emissivity is an increasing function in the interval if the brightness temperature is an increasing function or a constant function in a range and emissivity satisfies an inequality of emissivity and wavelength in that interval if the brightness temperature is a decreasing function in a range, according to the relationship of brightness temperatures at different wavelengths. The construction of emissivity assumption values is reduced from multiclass to one class and avoiding the unnecessary emissivity construction with emissivity model constraint conditions on the basis of brightness temperature information. Simulation experiments and comparisons for two different temperature points are carried out based on five measured targets with five representative variation trends of real emissivity. decreasing monotonically, increasing monotonically, first decreasing with wavelength and then increasing, first increasing and then decreasing and fluctuating with wavelength randomly. The simulation results show that compared with the SM method, for the same target under the same initial temperature and emissivity search range, the processing speed of the proposed algorithm is increased by 19.16%-43.45% with the same precision and the same calculation results.

  8. Spot-5 multispectral image for 60-75 days of rice mapping

    International Nuclear Information System (INIS)

    Ramli, Mohd Amiruddin; Shariff, Abdul Rashid Mohamed; Bejo, Siti Khairunniza

    2014-01-01

    The objective of this study is to investigate the potential application of Spot-5 multispectral satellite data in monitoring rice cultivation areas in IADA (Integrated Agriculture Development Area) located at Kerian District, Perak Malaysia. Information of the rice cultivation areas is a global economic and environmental significance. Multi-spectral images acquired at high spatial resolution are an important tool, especially in agricultural applications. This paper addresses the relationship between normalize difference vegetation index (NDVI) and ancillary data acquired from Farmers Organization Authority (PPK) for 217 farmer's field in IADA Kerian. The results indicated that NDVI range 0.62 – 0.75 has a strong positive relationship with the ground survey area estimation with (r = 0.85; p <0.01) (r 2 = 0.722). The r 2 value of 0.722 indicated a statistically significant linear relationship between the rice area estimate using NDVI range 0.62 – 0.75 and on the ground surveyed data for 217 farmers' fields. The equation of unstandardized distribution can be described as Ŷ=0.0197+0.852x. The equation for standardized regression formula for this distribution is Ŷ= 0.850x. Thus, the results indicate that 60-75 days of rice area can be estimated from the following equation Ŷ=0.197+0.852x, where Ŷ is the predicted rice area and x is area calculated using NDVI range 0.62-0.75 in IADA Kerian Perak Malaysia. The results appear promising and rice mapping operations using SPOT-5 multispectral image data can be foreseen

  9. Comparison of Hyperspectral and Multispectral Satellites for Discriminating Land Cover in Northern California

    Science.gov (United States)

    Clark, M. L.; Kilham, N. E.

    2015-12-01

    Land-cover maps are important science products needed for natural resource and ecosystem service management, biodiversity conservation planning, and assessing human-induced and natural drivers of land change. Most land-cover maps at regional to global scales are produced with remote sensing techniques applied to multispectral satellite imagery with 30-500 m pixel sizes (e.g., Landsat, MODIS). Hyperspectral, or imaging spectrometer, imagery measuring the visible to shortwave infrared regions (VSWIR) of the spectrum have shown impressive capacity to map plant species and coarser land-cover associations, yet techniques have not been widely tested at regional and greater spatial scales. The Hyperspectral Infrared Imager (HyspIRI) mission is a VSWIR hyperspectral and thermal satellite being considered for development by NASA. The goal of this study was to assess multi-temporal, HyspIRI-like satellite imagery for improved land cover mapping relative to multispectral satellites. We mapped FAO Land Cover Classification System (LCCS) classes over 22,500 km2 in the San Francisco Bay Area, California using 30-m HyspIRI, Landsat 8 and Sentinel-2 imagery simulated from data acquired by NASA's AVIRIS airborne sensor. Random Forests (RF) and Multiple-Endmember Spectral Mixture Analysis (MESMA) classifiers were applied to the simulated images and accuracies were compared to those from real Landsat 8 images. The RF classifier was superior to MESMA, and multi-temporal data yielded higher accuracy than summer-only data. With RF, hyperspectral data had overall accuracy of 72.2% and 85.1% with full 20-class and reduced 12-class schemes, respectively. Multispectral imagery had lower accuracy. For example, simulated and real Landsat data had 7.5% and 4.6% lower accuracy than HyspIRI data with 12 classes, respectively. In summary, our results indicate increased mapping accuracy using HyspIRI multi-temporal imagery, particularly in discriminating different natural vegetation types, such as

  10. TESTING OF LAND COVER CLASSIFICATION FROM MULTISPECTRAL AIRBORNE LASER SCANNING DATA

    Directory of Open Access Journals (Sweden)

    K. Bakuła

    2016-06-01

    Full Text Available Multispectral Airborne Laser Scanning provides a new opportunity for airborne data collection. It provides high-density topographic surveying and is also a useful tool for land cover mapping. Use of a minimum of three intensity images from a multiwavelength laser scanner and 3D information included in the digital surface model has the potential for land cover/use classification and a discussion about the application of this type of data in land cover/use mapping has recently begun. In the test study, three laser reflectance intensity images (orthogonalized point cloud acquired in green, near-infrared and short-wave infrared bands, together with a digital surface model, were used in land cover/use classification where six classes were distinguished: water, sand and gravel, concrete and asphalt, low vegetation, trees and buildings. In the tested methods, different approaches for classification were applied: spectral (based only on laser reflectance intensity images, spectral with elevation data as additional input data, and spectro-textural, using morphological granulometry as a method of texture analysis of both types of data: spectral images and the digital surface model. The method of generating the intensity raster was also tested in the experiment. Reference data were created based on visual interpretation of ALS data and traditional optical aerial and satellite images. The results have shown that multispectral ALS data are unlike typical multispectral optical images, and they have a major potential for land cover/use classification. An overall accuracy of classification over 90% was achieved. The fusion of multi-wavelength laser intensity images and elevation data, with the additional use of textural information derived from granulometric analysis of images, helped to improve the accuracy of classification significantly. The method of interpolation for the intensity raster was not very helpful, and using intensity rasters with both first and

  11. Science applications of a multispectral microscopic imager for the astrobiological exploration of Mars

    Science.gov (United States)

    Nunez, Jorge; Farmer, Jack; Sellar, R. Glenn; Swayze, Gregg A.; Blaney, Diana L.

    2014-01-01

    Future astrobiological missions to Mars are likely to emphasize the use of rovers with in situ petrologic capabilities for selecting the best samples at a site for in situ analysis with onboard lab instruments or for caching for potential return to Earth. Such observations are central to an understanding of the potential for past habitable conditions at a site and for identifying samples most likely to harbor fossil biosignatures. The Multispectral Microscopic Imager (MMI) provides multispectral reflectance images of geological samples at the microscale, where each image pixel is composed of a visible/shortwave infrared spectrum ranging from 0.46 to 1.73 μm. This spectral range enables the discrimination of a wide variety of rock-forming minerals, especially Fe-bearing phases, and the detection of hydrated minerals. The MMI advances beyond the capabilities of current microimagers on Mars by extending the spectral range into the infrared and increasing the number of spectral bands. The design employs multispectral light-emitting diodes and an uncooled indium gallium arsenide focal plane array to achieve a very low mass and high reliability. To better understand and demonstrate the capabilities of the MMI for future surface missions to Mars, we analyzed samples from Mars-relevant analog environments with the MMI. Results indicate that the MMI images faithfully resolve the fine-scale microtextural features of samples and provide important information to help constrain mineral composition. The use of spectral endmember mapping reveals the distribution of Fe-bearing minerals (including silicates and oxides) with high fidelity, along with the presence of hydrated minerals. MMI-based petrogenetic interpretations compare favorably with laboratory-based analyses, revealing the value of the MMI for future in situ rover-mediated astrobiological exploration of Mars.

  12. An amperometric enzyme electrode and its biofuel cell based on a glucose oxidase-poly(3-anilineboronic acid)-Pd nanoparticles bionanocomposite for glucose biosensing.

    Science.gov (United States)

    Sun, Lingen; Ma, Yixuan; Zhang, Pei; Chao, Long; Huang, Ting; Xie, Qingji; Chen, Chao; Yao, Shouzhuo

    2015-06-01

    A new amperometric enzyme electrode and its biofuel cell were fabricated based on a glucose oxidase (GOx)-poly(3-anilineboronic acid) (PABA)-Pd nanoparticles (PdNPs) bionanocomposite for biosensing of glucose. Briefly, Pd was electroplated on a multiwalled carbon nanotubes (MWCNTs)-modified Au electrode, and the GOx-PABA-PdNPs bionanocomposite was prepared on the Pd(plate)/MWCNTs/Au electrode through the chemical oxidation of a GOx-3-anilineboronic acid adduct by Na2PdCl4, followed by electrode-modification with an outer-layer chitosan (CS) film. The thus-prepared CS/GOx-PABA-PdNPs/Pd(plate)/MWCNTs/Au electrode exhibited a linear amperometric response to glucose concentration from 2.0 μM to 4.5 mM with a sensitivity of 160 μA/mM/cm(2), sub-μM detection limit, and excellent operation/storage stability in the first-generation biosensing mode, as well as excellent analytical performance in the second-generation biosensing mode. The good recoveries of glucose obtained from spiked urine samples revealed the application potential of our amperometric enzyme electrode. In addition, a glucose/O2 biofuel cell was constructed using this enzyme electrode as the anode and a Pt/MWCNTs/Au electrode as the cathode, and this biofuel cell as a self-powered biosensing device showed a linear voltage response to glucose concentration from 100 μM to 13.5 mM with a sensitivity of 43.5 mV/mM/cm(2) and excellent operation/storage stability. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. CMOS Time-Resolved, Contact, and Multispectral Fluorescence Imaging for DNA Molecular Diagnostics

    Directory of Open Access Journals (Sweden)

    Nan Guo

    2014-10-01

    Full Text Available Instrumental limitations such as bulkiness and high cost prevent the fluorescence technique from becoming ubiquitous for point-of-care deoxyribonucleic acid (DNA detection and other in-field molecular diagnostics applications. The complimentary metal-oxide-semiconductor (CMOS technology, as benefited from process scaling, provides several advanced capabilities such as high integration density, high-resolution signal processing, and low power consumption, enabling sensitive, integrated, and low-cost fluorescence analytical platforms. In this paper, CMOS time-resolved, contact, and multispectral imaging are reviewed. Recently reported CMOS fluorescence analysis microsystem prototypes are surveyed to highlight the present state of the art.

  14. Classification of different tomato seed cultivars by multispectral visible-near infrared spectroscopy and chemometrics

    DEFF Research Database (Denmark)

    Shrestha, Santosh; Deleuran, Lise Christina; Gislum, René

    2016-01-01

    nm were extracted from multispectral images of tomato seeds. Principal component analysis (PCA) was used for data exploration, while partial least squares discriminant analysis (PLS-DA) and support vector machine discriminant analysis (SVM-DA) were used to classify the five different tomato cultivars....... The results showed very good classification accuracy for two independent test sets ranging from 94% to 100% for all tomato cultivars irrespective of chemometric methods. The overall classification error rates were 3.2% and 0.4% for the PLS-DA and SVM-DA calibration models, respectively. The results indicate...

  15. An application of the Self Organizing Map Algorithm to computer aided classification of ASTER multispectral data

    Directory of Open Access Journals (Sweden)

    Ferdinando Giacco

    2008-01-01

    Full Text Available In this paper we employ the Kohonen’s Self Organizing Map (SOM as a strategy for an unsupervised analysis of ASTER multispectral (MS images. In order to obtain an accurate clusterization we introduce as input for the network, in addition to spectral data, some texture measures extracted from IKONOS images, which gives a contribution to the classification of manmade structures. After clustering of SOM outcomes, we associated each cluster with a major land cover and compared them with prior knowledge of the scene analyzed.

  16. Transferring results from NIR-hyperspectral to NIR-multispectral imaging systems

    DEFF Research Database (Denmark)

    Calvini, Rosalba; Amigo Rubio, Jose Manuel; Ulrici, Alessandro

    2017-01-01

    commercially available filters matching the selected spectral regions, and used to calculate multivariate classification models with Partial Least Squares-Discriminant Analysis (PLS-DA) and sparse PLS-DA. Proper strategies for the definition of the training set and the selection of the most effective......Due to the differences in terms of both price and quality, the availability of effective instrumentation to discriminate between Arabica and Robusta coffee is extremely important. To this aim, the use of multispectral imaging systems could provide reliable and accurate real-time monitoring...

  17. The composite sequential clustering technique for analysis of multispectral scanner data

    Science.gov (United States)

    Su, M. Y.

    1972-01-01

    The clustering technique consists of two parts: (1) a sequential statistical clustering which is essentially a sequential variance analysis, and (2) a generalized K-means clustering. In this composite clustering technique, the output of (1) is a set of initial clusters which are input to (2) for further improvement by an iterative scheme. This unsupervised composite technique was employed for automatic classification of two sets of remote multispectral earth resource observations. The classification accuracy by the unsupervised technique is found to be comparable to that by traditional supervised maximum likelihood classification techniques. The mathematical algorithms for the composite sequential clustering program and a detailed computer program description with job setup are given.

  18. Rare earth-based low-index films for IR and multispectral thin film solutions

    Science.gov (United States)

    Stolze, Markus; Neff, Joe; Waibel, Friedrich

    2017-10-01

    Non-thoriated rare-earth fluoride based coating solutions involving DyF3 and YbF3 based films as well as non-wetting fluorohydrocarbon cap layers on such films, have been deposited, analyzed and partly optimized. Intermediate results for DyF3 based films from ion assisted e-gun deposition with O2 and N2 alone and as base for the non-wetting to-player as well as for YbF3 starting material with or without admixtures of CaF2 are discussed for low-loss LWIR and multispectral solutions.

  19. New Spectral Index for Detecting Wheat Yellow Rust Using Sentinel-2 Multispectral Imagery

    Directory of Open Access Journals (Sweden)

    Qiong Zheng

    2018-03-01

    Full Text Available Yellow rust is one of the most destructive diseases for winter wheat and has led to a significant decrease in winter wheat quality and yield. Identifying and monitoring yellow rust is of great importance for guiding agricultural production over large areas. Compared with traditional crop disease discrimination methods, remote sensing technology has proven to be a useful tool for accomplishing such a task at large scale. This study explores the potential of the Sentinel-2 Multispectral Instrument (MSI, a newly launched satellite with refined spatial resolution and three red-edge bands, for discriminating between yellow rust infection severities (i.e., healthy, slight, and severe in winter wheat. The corresponding simulative multispectral bands for the Sentinel-2 sensor were calculated by the sensor’s relative spectral response (RSR function based on the in situ hyperspectral data acquired at the canopy level. Three Sentinel-2 spectral bands, including B4 (Red, B5 (Re1, and B7 (Re3, were found to be sensitive bands using the random forest (RF method. A new multispectral index, the Red Edge Disease Stress Index (REDSI, which consists of these sensitive bands, was proposed to detect yellow rust infection at different severity levels. The overall identification accuracy for REDSI was 84.1% and the kappa coefficient was 0.76. Moreover, REDSI performed better than other commonly used disease spectral indexes for yellow rust discrimination at the canopy scale. The optimal threshold method was adopted for mapping yellow rust infection at regional scales based on realistic Sentinel-2 multispectral image data to further assess REDSI’s ability for yellow rust detection. The overall accuracy was 85.2% and kappa coefficient was 0.67, which was found through validation against a set of field survey data. This study suggests that the Sentinel-2 MSI has the potential for yellow rust discrimination, and the newly proposed REDSI has great robustness and

  20. Multispectral imaging as a potential tool for seed health testing of spinach (Spinacia oleracea L.)

    DEFF Research Database (Denmark)

    Olesen, M. Halkjaer; Carstensen, Jens Michael; Boelt, B.

    2011-01-01

    University. Our study demonstrates that multispectral imaging with wavelengths ranging from 395-970 nm can be used to distinguish between uninfected spinach seeds and seeds infected with Verticillium spp., Fusarium spp., Stemphylium botryosum, Cladosporium spp. and Alternaria alternata. Analytical separation...... using only NIR gave a separation of 26-88% between uninfected and Fusarium spp. infected seeds. Alternaria alternata and Fusarium spp. could be distinguished from each other and from Cladosporium spp., Verticillium spp. and Stemphylium spp. Separation of Cladosporium spp., Verticillium spp....... and Stemphylium spp. needs further development before practical application....