WorldWideScience

Sample records for pure siderophore type

  1. Purification of siderophores of Alcaligenes faecalis on Amberlite XAD.

    Science.gov (United States)

    Sayyed, R Z; Chincholkar, S B

    2006-05-01

    Studies on siderophore production using Alcaligenes faecalis BCCM ID 2374 revealed hydroxamate and catecholate type of siderophores at 347 microg mL-1. These fractions were purified on Amberlite XAD-4 column, which resulted in the separation of two bands having absorption maxima at 264 and 224 nm. The amount of pure siderophore obtained in powdered form from first and second fraction was 297 and 50 microg mL-1 respectively.

  2. Rhizoferrin: a complexone type siderophore of the Mucorales and entomophthorales (Zygomycetes).

    Science.gov (United States)

    Thieken, A; Winkelmann, G

    1992-07-01

    The present investigation presents evidence that rhizoferrin, a novel polycarboxylate or complexone-type siderophore, originally isolated from Rhizopus microsporus, represents the common siderophore within the Zygomycetes. Thus, rhizoferrin could be detected by HPLC analysis in various families of the Mucorales, e.g., Rhizopus microsporus var. rhizopodiformis, Mucor mucedo and Phycomyces nitens (Mucoraceae), Chaetostylum fresenii and Cokeromyces recurvatus (Thamnidiaceae), Cunninghamella elegans and Mycotypha africana (Choanephoraceae) and Mortierella vinacea (Mortierellaceae) and in Basidiobolus microsporus (Entomophthorales). The function of rhizoferrin as a siderophore in the fungus R. microsporus var. rhizopodiformis was demonstrated by time- and concentration-dependent uptake of [55Fe]-labelled rhizoferrin, yielding saturation kinetics with values of Km = 8 microM and V(max) = 1.2 nmol min-1 (mg dry wt)-1.

  3. The Expansion Postponement in Pure Type Systems

    Institute of Scientific and Technical Information of China (English)

    宋方敏

    1997-01-01

    The expansion postponement problem in Pure Type Systems is an open problem raised by R.Pollack in 1992.In this paper,the author presents a set of necessary and sufficient conditions for this problem and a set of sufficient conditions for it.The author also gives some properties for pure typ systems without the expansion rule.

  4. Production of the Catechol Type Siderophore Bacillibactin by the Honey Bee Pathogen Paenibacillus larvae

    Science.gov (United States)

    Garcia-Gonzalez, Eva; Poppinga, Lena; Süssmuth, Roderich D.; Genersch, Elke

    2014-01-01

    The Gram-positive bacterium Paenibacillus larvae is the etiological agent of American Foulbrood. This bacterial infection of honey bee brood is a notifiable epizootic posing a serious threat to global honey bee health because not only individual larvae but also entire colonies succumb to the disease. In the recent past considerable progress has been made in elucidating molecular aspects of host pathogen interactions during pathogenesis of P. larvae infections. Especially the sequencing and annotation of the complete genome of P. larvae was a major step forward and revealed the existence of several giant gene clusters coding for non-ribosomal peptide synthetases which might act as putative virulence factors. We here present the detailed analysis of one of these clusters which we demonstrated to be responsible for the biosynthesis of bacillibactin, a P. larvae siderophore. We first established culture conditions allowing the growth of P. larvae under iron-limited conditions and triggering siderophore production by P. larvae. Using a gene disruption strategy we linked siderophore production to the expression of an uninterrupted bacillibactin gene cluster. In silico analysis predicted the structure of a trimeric trithreonyl lactone (DHB-Gly-Thr)3 similar to the structure of bacillibactin produced by several Bacillus species. Mass spectrometric analysis unambiguously confirmed that the siderophore produced by P. larvae is identical to bacillibactin. Exposure bioassays demonstrated that P. larvae bacillibactin is not required for full virulence of P. larvae in laboratory exposure bioassays. This observation is consistent with results obtained for bacillibactin in other pathogenic bacteria. PMID:25237888

  5. Microbial Siderophores

    Science.gov (United States)

    Budzikiewicz, Herbert

    Iron is of great importance for many metabolic processes since the redox potential between its two valence states Fe2+ and Fe3+ lies within the range of physiological processes. Actually, iron is not a rare element, it is fourth in abundance in the earth crust, but it is not readily available for microorganisms. In the soil ferric oxide hydrates are formed at pH values around seven and the concentration of free Fe3+ is at best 10-17 mol/dm3 while about 10-6 mol/dm3 would be needed. In living organisms iron is usually strongly bound to peptidic substances such as transferrins. To increase the supply of soluble iron microorganisms other than those living in an acidic habitat may circumvent the problem by reduction of Fe3+ to Fe2+ (182), which seems to be of major importance for marine phytoplankton (151); see also amphiphilic marine bacteria (Sect.2.8) and Fe2+ binding ligands (Sect. 7) below. An important alternative is the production of Fe3+ chelating compounds, so-called siderophores. Siderophores are secondary metabolites with masses below 2,000 Da and a high affinity to Fe3+. Small iron-siderophore complexes can enter the cell via unspecific porins, larger ones need a transport system that recognizes the ferri-siderophore at the cell surface. In the cell, iron is released mostly by reduction to the less strongly bound Fe2+ state (137), and the free siderophore is re-exported ("shuttle mechanism"); for a modified shuttle system see pyoverdins (Sect. 2.1) and amonabactins (Sect. 2.7). Rarely the siderophore is degraded in the periplasmatic space as, e.g. enterobactin (Sect. 2.7). Alternatively Fe3+ is transferred at the cell surface from the ferri-siderophore to a trans-membrane transport system ("taxi mechanism"). A probably archaic and unspecific variety of the taxi mechanism comprises the reduction of Fe3+ at the cell surface (see ferrichrome A, Sect. 2.6 (99, 105)). The terms "shuttle" and "taxi mechanism" were coined by Raymond and Carrano (296).

  6. Growth stimulation of Brevibacterium sp. by siderophores

    NARCIS (Netherlands)

    Noordman, W.H.; Reissbrodt, R.; Bongers, R.S.; Rademaker, J.L.W.; Bockelmann, W.; Smit, G.

    2006-01-01

    To assess which types of siderophores are typically produced by Brevibacterium and how siderophore production and utilization traits are distributed within this genus. Methods and Results: During co-cultivation experiments it was found that growth of B. linens Br5 was stimulated by B. linens NIZO B1

  7. The Bradyrhizobium japonicum fegA gene encodes an iron-regulated outer membrane protein with similarity to hydroxamate-type siderophore receptors.

    Science.gov (United States)

    LeVier, K; Guerinot, M L

    1996-12-01

    Iron is important in the symbiosis between soybean and its nitrogen-fixing endosymbiont Bradyrhizobium japonicum, yet little is known about rhizobial iron acquisition strategies. Analysis of outer membrane proteins (OMPs) from B. japonicum 61A152 identified three iron-regulated OMPs in the size range of several known receptors for Fe(III)-scavenging siderophores. One of the iron-regulated proteins, FegA, was purified and microsequenced, and a reverse genetics approach was used to clone a fegA-containing DNA fragment. Sequencing of this fragment revealed a single open reading frame of 750 amino acids. A putative N-terminal signal sequence of 14 amino acids which would result in a mature protein of 736 amino acids with a molecular mass of 80,851 Da was predicted. FegA shares significant amino acid similarity with several Fe(III)-siderophore receptors from gram-negative bacteria and has greater than 50% amino acid similarity and 33% amino acid identity with two [corrected] bacterial receptors for hydroxamate-type Fe(III)-siderophores. A dendrogram describing total inferred sequence similarity among 36 TonB-dependent OMPs was constructed; FegA grouped with Fe(III)-hydroxamate receptors. The transcriptional start site of fegA was mapped by primer extension analysis, and a putative Fur-binding site was found in the promoter. Primer extension and RNA slot blot analysis demonstrated that fegA was expressed only in cells grown under iron-limiting conditions. This is the first report of the cloning of a gene encoding a putative Fe(III)-siderophore receptor from nitrogen-fixing rhizobia.

  8. Ambitwistor pure spinor string in a type II supergravity background

    Energy Technology Data Exchange (ETDEWEB)

    Chandia, Osvaldo [Departamento de Ciencias, Facultad de Artes Liberales, Universidad Adolfo Ibáñez,Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez,Diagonal Las Torres 2640, Peñalolén, Santiago (Chile); Vallilo, Brenno Carlini [Departamento de Ciencias Físicas, Facultad de Ciencias Exactas, Universidad Andres Bello,República 220, Santiago (Chile)

    2015-06-30

    We construct the ambitwistor pure spinor string in a general type II supergravity background in the semi-classical regime. Almost all supergravity constraints are obtained from nilpotency of the BRST charge and further consistency conditions from additional world-sheet the case of AdS{sub 5}×S{sup 5} background.

  9. Siderophore sorption to clays.

    Science.gov (United States)

    Maurice, Patricia A; Haack, Elizabeth A; Mishra, Bhoopesh

    2009-08-01

    Siderophores are low molecular weight organic ligands exuded by some aerobic organisms and plants to acquire Fe under Fe-limited conditions. The hydroxamate siderophores may sorb to aluminosilicate clays through a variety of mechanisms depending upon the nature of the clay and of the siderophore along with solution conditions such as pH, ionic strength, and presence of metal cations. They may also affect metal binding to clays. Here, we review previous studies of siderophore sorption to aluminosilicate clays; briefly discuss how the techniques of X-ray diffractometry, Fourier-transform infrared spectroscopy, and X-ray absorption spectroscopy may be applied to such studies; review effects of siderophores on metal sorption to clays; and highlight some areas for future research.

  10. Pure Spinor Superstrings on Generic type IIA Supergravity Backgrounds

    CERN Document Server

    D'Auria, R; Grassi, P A; Trigiante, M

    2008-01-01

    We derive the Free Differential Algebra for type IIA supergravity in 10 dimensions in the string frame. We provide all fermionic terms for all curvatures. We derive the Green-Schwarz sigma model for type IIA superstring based on the FDA construction and we check its invariance under kappa-symmetry. Finally, we derive the pure spinor sigma model and we check the BRST invariance. The present derivation has the advantage that the resulting sigma model is constructed in terms of the superfields appearing in the FDA and therefore one can directly relate a supergravity background with the corresponding sigma model. The complete explicit form of the BRST transformations is given and some new pure spinor constraints are obtained. Finally, the explicit form of the action is given.

  11. On conformally flat and type N pure radiation metrics

    CERN Document Server

    Podolsky, Jiri

    2009-01-01

    We study pure radiation spacetimes of algebraic types O and N with a possible cosmological constant. In particular, we present explicit transformations which put these metrics, that were recently re-derived by Edgar, Vickers and Machado Ramos, into a general Ozsvath-Robinson-Rozga form. By putting all such metrics into the unified coordinate system we confirm that their derivation based on the GIF formalism is correct. We identify only few trivial differences.

  12. A purely flexible lightweight membrane-type acoustic metamaterial

    Science.gov (United States)

    Ma, Fuyin; Wu, Jiu Hui; Huang, Meng; Zhang, Weiquan; Zhang, Siwen

    2015-05-01

    This paper proposes a purely flexible lightweight membrane-type acoustic structure, wherein one kind of flexible lightweight rubber material takes the roles of mass and stiffness and another type of lightweight flexible EVA (ethylene-vinyl acetate copolymer) or plastic material functions as the localized stiffness for each unit. Because both the scatterers and base are constituted by the same material, this type of structure breaks the limitation that the metamaterials and phononic crystals need different materials with relatively large density and elasticity modulus ratios to play the roles of the scatterers and base respectively. Based on the band structures with different units, mass block shapes and size parameters, it is suggested that the shapes of the mass block can significantly affect the band structure. In addition, this type of structure could not only open a full band gap in the low-frequency range below 500 Hz, but also obtain an ultra-low-frequency bending wave band gap in the range below 100 Hz. Finally, we take into account the semi-infinite medium as a component, and calculate the sound transmission loss (STL) to evaluate the interaction between the structure and air. An experimental validation employing the cylindrical mass structure was developed to directly support the simulation results. Since the structures proposed in this study have achieved a purely flexible lightweight design, there exists an important promotion effect to realize the engineering applications of the acoustic metamaterials in practice.

  13. Siderophore-Mediated Iron Sequestering by Shewanella putrefaciens

    Science.gov (United States)

    Gram, Lone

    1994-01-01

    The iron-sequestering abilities of 51 strains of Shewanella putrefaciens isolated from different sources (fish, water, and warm-blooded animals) were assessed. Thirty strains (60%) produced siderophores in heat-sterilized fish juice as determined by the chrome-azurol-S assay. All cultures were negative for the catechol-type siderophore, whereas 24 of the 30 siderophore-producing strains tested positive in the Csáky test, indicating the production of siderophores of the hydroxamate type. Siderophore-producing S. putrefaciens could to some degree cross-feed on the siderophores of other S. putrefaciens strains and on compounds produced by an Aeromonas salmonicida strain under iron-limited conditions. The siderophores of S. putrefaciens were not sufficiently strong to inhibit growth of other bacteria under iron-restricted conditions. However, siderophore-producing Pseudomonas bacteria were always inhibitory to S. putrefaciens under iron-limited conditions. Growth of siderophore-producing strains under iron-limited conditions induced the formation of one major new outer membrane protein of approximately 72 kDa. Two outer membrane proteins of approximately 53 and 23 kDa were not seen when iron was restricted. Images PMID:16349298

  14. Siderophore: Structural And Functional Characterisation – A Comprehensive Review

    Directory of Open Access Journals (Sweden)

    Sah Stuti

    2015-09-01

    Full Text Available Plants and microbes have enormous importance in our daily life. Iron is said to be the fourth most abundant element in the earth's crust from soil, still many plants face problem in uptaking iron because it is found in insoluble form, which severely restricts the bioavailability of this metal. In response to this, microorganisms present in soil such as Pseudomonas sp., Enterobacter genera, Bacillus and Rhodococcus produce special iron carriers or iron-binding compounds called as ‘siderphores’ or ‘siderochromes’. This paper is an attempt to review the importance of siderphores in enhancing plants’ iron utilisation strategies, the mode of transport of siderophores along with iron across the memberane and depending on the difference in their chemical structure, functional moiety and their source of isolation of four different types of siderophore (hydroxamates, catecholates, carboxylates and siderophore with mixed ligand. Siderophore and their derivative have large application in agriculture as to increase soil fertility and as biocontrol for fungal pathogen. This review unlike other reviews includes (1 types of siderophore, (2 the structural difference amongst them, (3 siderophore biosynthesis, (4 transport mechanism, (5 the genetics of siderophore and (6 their efficacy in human life.

  15. The matrix type of purely infinite simple Leavitt path algebras

    CERN Document Server

    Abrams, Gene

    2009-01-01

    Let $R$ denote the purely infinite simple unital Leavitt path algebra $L(E)$. We completely determine the pairs of positive integers $(c,d)$ for which there is an isomorphism of matrix rings $M_c(R)\\cong M_d(R)$, in terms of the order of $[1_R]$ in the Grothendieck group $K_0(R)$.

  16. Siderophores for molecular imaging applications.

    Science.gov (United States)

    Petrik, Milos; Zhai, Chuangyan; Haas, Hubertus; Decristoforo, Clemens

    2017-01-01

    This review covers publications on siderophores applied for molecular imaging applications, mainly for radionuclide-based imaging. Siderophores are low molecular weight chelators produced by bacteria and fungi to scavenge essential iron. Research on these molecules has a continuing history over the past 50 years. Many biomedical applications have been developed, most prominently the use of the siderophore desferrioxamine (DFO) to tackle iron overload related diseases. Recent research described the upregulation of siderophore production and transport systems during infection. Replacing iron in siderophores by radionuclides, the most prominent Ga-68 for PET, opens approaches for targeted imaging of infection; the proof of principle has been reported for fungal infections using (68)Ga-triacetylfusarinine C (TAFC). Additionally, fluorescent siderophores and therapeutic conjugates have been described and may be translated to optical imaging and theranostic applications. Siderophores have also been applied as bifunctional chelators, initially DFO as chelator for Ga-67 and more recently for Zr-89 where it has become the standard chelator in Immuno-PET. Improved DFO constructs and bifunctional chelators based on cyclic siderophores have recently been developed for Ga-68 and Zr-89 and show promising properties for radiopharmaceutical development in PET. A huge potential from basic biomedical research on siderophores still awaits to be utilized for clinical and translational imaging.

  17. Iron(III)-siderophore coordination chemistry: Reactivity of marine siderophores.

    Science.gov (United States)

    Butler, Alison; Theisen, Roslyn M

    2010-02-01

    Two remarkable features of many siderophores produced by oceanic bacteria are the prevalence of an α-hydroxy-carboxylic acid functionality either in the form of the amino acid β-hydroxy aspartic acid or in the form of citric acid, as well as the predominance of amphiphilic siderophores. This review will provide an overview of the photoreactivity that takes place when siderophores containing β-hydroxy aspartic acid and citric acid are coordinated to iron(III). This photoreactivity raises questions about the role of this photochemistry in microbial iron acquisition as well as upper-ocean iron cycling. The self-assembly of amphiphilic siderophores and the coordination-induced phase-change of the micelle-to-vesicle transformation will also be reviewed. The distinctive photosensitive and self-assembly properties of marine siderophores hint at possibly new microbial iron acquisition mechanisms.

  18. Growth of Actinobacillus pleuropneumoniae is promoted by exogenous hydroxamate and catechol siderophores.

    OpenAIRE

    Diarra, M. S.; Dolence, J A; Dolence, E K; Darwish, I; Miller, M.J.; Malouin, F; Jacques, M.

    1996-01-01

    Siderophores bind ferric ions and are involved in receptor-specific iron transport into bacteria. Six types of siderophores were tested against strains representing the 12 different serotypes of Actinobacillus pleuropneumoniae. Ferrichrome and bis-catechol-based siderophores showed strong growth-promoting activities for A. pleuropneumoniae in a disk diffusion assay. Most strains of A. pleuropneumoniae tested were able to use ferrichrome (21 of 22 or 95%), ferrichrome A (20 of 22 or 90%), and ...

  19. Pure Testicular Seminoma Relapsing Late with Somatic Type Malignancy

    Directory of Open Access Journals (Sweden)

    Klaus-Peter Dieckmann

    2017-01-01

    Full Text Available Background. Somatic type malignancy (STM occurs in 2% of all germ cell tumours (GCTs. The prognosis is unfavourable and the origin is poorly understood. Pathogenetic hypotheses involve direct transformation of teratoma, origin from totipotent cancer cells, or derivation from yolk sac tumour elements. Case Presentation. A 31-year-old patient was cured from testicular seminoma clinical stage IIc by orchiectomy and cisplatin-based chemotherapy. Nine years later, he experienced a late relapse with a mass sized 5×6 cm located at the former metastatic site. As no remission occurred after chemotherapy with three cycles of cisplatin, ifosfamide and etoposide, the mass was surgically resected. Histologically, the specimen consisted of neurofibroma with areas of malignant peripheral nerve sheath tumour and spots with mature bone formation. FISH analysis disclosed isochromosome 12p in the majority of evaluated cells suggesting somatic type malignancy (STM of GCT. The patient is well 1 year after surgery. Conclusion. The pathogenesis of this STM remains enigmatic. The origin from GCT was evidenced by documentation of isochromosome 12p. Unrecognized teratomatous elements in the primary and totipotent cancer cells surviving the first chemotherapy could be hypothesized to represent the origin. STM developing from seminoma cells would be another novel hypothesis.

  20. Pure-type superconducting permanent-magnet undulator.

    Science.gov (United States)

    Tanaka, Takashi; Tsuru, Rieko; Kitamura, Hideo

    2005-07-01

    A novel synchrotron radiation source is proposed that utilizes bulk-type high-temperature superconductors (HTSCs) as permanent magnets (PMs) by in situ magnetization. Arrays of HTSC blocks magnetized by external magnetic fields are placed below and above the electron path instead of conventional PMs, generating a periodic magnetic field with an offset. Two methods are presented to magnetize the HTSCs and eliminate the field offset, enabling the HTSC arrays to work as a synchrotron radiation source. An analytical formula to calculate the peak field achieved in a device based on this scheme is derived in a two-dimensional form for comparison with synchrotron radiation sources using conventional PMs. Experiments were performed to demonstrate the principle of the proposed scheme and the results have been found to be very promising.

  1. Siderophores: More than Stealing Iron

    Directory of Open Access Journals (Sweden)

    Judith Behnsen

    2016-11-01

    Full Text Available Siderophores are small molecular iron chelators that are produced by microbes and whose most notable function is to sequester iron from the host and provide this essential metal nutrient to microbes. Recent studies have proposed additional, noncanonical roles for siderophores, including the acquisition of noniron metals and modulation of host functions. Recently, Holden et al. (V. I. Holden, P. Breen, S. Houle, C. M. Dozois, and M. A. Bachman, mBio 7:e01397-16, 2016, http://dx.doi.org/10.1128/mBio.01397-16 showed that siderophores secreted by Klebsiella pneumoniae during lung infection induce stabilization of the transcription factor HIF-1α, increase the expression of proinflammatory cytokines in the lung, and promote dissemination of K. pneumoniae to the spleen. Thus, their study demonstrated novel roles for siderophores in vivo, beyond iron sequestration. The interaction of siderophores with host cells further promotes the pathogenicity of K. pneumoniae and is likely relevant for other pathogens that also secrete siderophores in the host.

  2. Obtaining a class of Type N pure radiation metrics using invariant operators

    CERN Document Server

    Ramos, M P M

    2004-01-01

    We develop further the integration procedure in the generalised invariant formalism, and demonstrate its efficiency by obtaining a class of Petrov type N pure radiation metrics without any explicit integration, and with comparatively little detailed calculations. The method is similar to the one exploited by Edgar and Vickers when deriving the general conformally flat pure radiation metric. A major addition to the technique is the introduction of non-intrinsic elements in generalised invariant formalism, which can be exploited to keep calculations manageable.

  3. Siderophores: The special ingredient to cyanobacterial blooms

    Science.gov (United States)

    Du, Xue; Creed, Irena; Trick, Charles

    2013-04-01

    Freshwater lakes provide a number of significant ecological services including clean drinking water, habitat for aquatic biota, and economic benefits. The provision of these ecological services, as well as the health of these aquatic systems, is threatened by the excessive growth of algae, specifically, cyanobacteria. Historically, blooms have been linked to eutrophication but recent occurrences indicate that there are less dramatic changes that induce these blooms. Iron is an essential micronutrient required for specific essential metabolic pathways; however, the amount of biologically available iron in naturally occurring lake ranges from saturation to much lower than cell transport affinities. To assist in the modulation of iron availabilities, cyanobacteria in culture produce low molecular weight compounds that function in an iron binding and acquisition system; nevertheless, this has yet to be confirmed in naturally occurring lakes. This project explored the relationship of P, N and in particular, Fe, in the promotion of cyanobacteria harmful algal blooms in 30 natural freshwater lakes located in and around the Elk Island National Park, Alberta. It is hypothesized that cyanobacteria produce and utilize iron chelators called siderophores in low Fe and nitrogen (N) conditions, creating a competitive advantage over other algae in freshwater lakes. Lakes were selected to represent a range of iron availability to explore the nutrient composition of lakes that propagated cyanobacteria harmful algal blooms (cHABs) compared to lakes that did not. Lake water was analyzed for nutrients, microbial composition, siderophore concentration, and toxin concentration. Modifications were made to optimize the Czaky and Arnow tests for hydroxamate- and catecholate-type siderophores, respectively, for field conditions. Preliminary results indicate the presence of iron-binding ligands (0.11-2.34 mg/L) in freshwater lakes characterized by widely ranging Fe regimes (0.04-2.74 mg

  4. Pure annihilation type $ D\\to PP(V)$ decays in the perturbative QCD approach

    CERN Document Server

    Zou, Zhi-Tian; Lü, Cai-Dian

    2013-01-01

    The annihilation type diagrams are difficult to calculate in any kind of models or method. Encouraged by the the successful calculation of pure annihilation type B decays in the perturbative QCD factorization approach, we calculate the pure annihilation type $D\\to PP(V)$ decays in the perturbative QCD approach based on the $k_T$ factorization. Although the expansion parameter $1/m_D$ is not very small, our leading order numerical results agree with the existing experiment data for most channels. We expect the more accurate observation from experiments, which can help us learn about the dynamics of $D$ meson weak decays.

  5. Staphyloferrin A as siderophore-component in fluoroquinolone-based Trojan horse antibiotics.

    Science.gov (United States)

    Milner, Stephen J; Seve, Alexandra; Snelling, Anna M; Thomas, Gavin H; Kerr, Kevin G; Routledge, Anne; Duhme-Klair, Anne-Kathrin

    2013-06-07

    A series of fluoroquinolone conjugates was synthesised by linking the carboxylic acid functionality of the carboxylate-type siderophore staphyloferrin A and its derivatives to the piperazinyl nitrogen of ciprofloxacin and norfloxacin via amide bond formation. Four siderophore-drug conjugates were screened against a panel of bacteria associated with infection in humans. Whilst no activity was found against ciprofloxacin- or norfloxacin-resistant bacteria, one of the conjugates retained antibacterial activity against fluoroquinolone-susceptible strains although the structure of its lysine-based siderophore component differs from that of the natural siderophore staphyloferrin A. In contrast, three ornithine-based siderophore conjugates showed significantly reduced activity against strains that are susceptible to their respective parent fluoroquinolones, regardless of the type of fluoroquinolone attached or chirality at the ornithine Cα-atom. The loss of potency observed for the (R)- and (S)-ornithine-based ciprofloxacin conjugates correlates with their reduced inhibitory activity against the target enzyme DNA gyrase.

  6. Effect of metals on a siderophore producing bacterial isolate and its implications on microbial assisted bioremediation of metal contaminated soils.

    Science.gov (United States)

    Gaonkar, Teja; Bhosle, Saroj

    2013-11-01

    A bacterial isolate producing siderophore under iron limiting conditions, was isolated from mangroves of Goa. Based on morphological, biochemical, chemotaxonomical and 16S rDNA studies, the isolate was identified as Bacillus amyloliquefaciens NAR38.1. Preliminary characterization of the siderophore indicated it to be catecholate type with dihydroxy benzoate as the core component. Optimum siderophore production was observed at pH 7 in mineral salts medium (MSM) without any added iron with glucose as the carbon source. Addition of NaCl in the growth medium showed considerable decrease in siderophore production above 2% NaCl. Fe(+2) and Fe(+3) below 2 μM and 40 μM concentrations respectively, induced siderophore production, above which the production was repressed. Binding studies of the siderophore with Fe(+2) and Fe(+3) indicated its high affinity towards Fe(+3). The siderophore concentration in the extracellular medium was enhanced when MSM was amended with essential metals Zn, Co, Mo and Mn, however, decreased with Cu, while the concentration was reduced with abiotic metals As, Pb, Al and Cd. Significant increase in extracellular siderophore production was observed with Pb and Al at concentrations of 50 μM and above. The effect of metals on siderophore production was completely mitigated in presence of Fe. The results implicate effect of metals on the efficiency of siderophore production by bacteria for potential application in bioremediation of metal contaminated iron deficient soils especially in the microbial assisted phytoremediation processes.

  7. Growth and siderophore production of Xylella fastidiosa under iron-limited conditions.

    Science.gov (United States)

    Silva-Stenico, Maria Estela; Pacheco, Flávia Tereza Hansen; Rodrigues, Jorge Luiz Mazza; Carrilho, Emanuel; Tsai, Siu Mui

    2005-01-01

    In this study, the production of siderophores by Xylella fastidiosa from the citrus bacteria isolate 31b9a5c (FAPESP - ONSA, Brazil) was investigated. The preliminary evidence supporting the existence of siderophore in X. fastidiosa was found during the evaluation of sequencing data generated in our lab using the BLAST-X tool, which indicated putative open reading frames (ORFs) associated with iron-binding proteins. In an iron-limited medium siderophores were detected in the supernatant of X. fastidiosa cultures. The endophytic bacterium Methylobacterium extorquens was also evaluated. Capillary electrophoresis was used to separate putative siderophores produced by X. fastidiosa. The bacterial culture supernatants of X. fastidiosa were identified negative for hydroxamate and catechol and positive for M. extorquens that secreted hydroxamate-type siderophores.

  8. Growth of Actinobacillus pleuropneumoniae is promoted by exogenous hydroxamate and catechol siderophores.

    Science.gov (United States)

    Diarra, M S; Dolence, J A; Dolence, E K; Darwish, I; Miller, M J; Malouin, F; Jacques, M

    1996-03-01

    Siderophores bind ferric ions and are involved in receptor-specific iron transport into bacteria. Six types of siderophores were tested against strains representing the 12 different serotypes of Actinobacillus pleuropneumoniae. Ferrichrome and bis-catechol-based siderophores showed strong growth-promoting activities for A. pleuropneumoniae in a disk diffusion assay. Most strains of A. pleuropneumoniae tested were able to use ferrichrome (21 of 22 or 95%), ferrichrome A (20 of 22 or 90%), and lysine-based bis-catechol (20 of 22 or 90%), while growth of 36% (8 of 22) was promoted by a synthetic hydroxamate, N5-acetyl-N5-hydroxy-L-ornithine tripeptide. A. pleuropneumoniae serotype 1 (strain FMV 87-682) and serotype 5 (strain 2245) exhibited a distinct yellow halo around colonies on Chrome Azurol S agar plates, suggesting that both strains can produce an iron chelator (siderophore) in response to iron stress. The siderophore was found to be neither a phenolate nor a hydroxamate by the chemical tests of Arnow and Csaky, respectively. This is the first report demonstrating the production of an iron chelator and the use of exogenous siderophores by A. pleuropneumoniae. A spermidine-based bis-catechol siderophore conjugated to a carbacephalosporin was shown to inhibit growth of A. pleuropneumoniae. A siderophore-antibiotic-resistant strain was isolated and shown to have lost the ability to use ferrichrome, synthetic hydroxamate, or catechol-based siderophores when grown under conditions of iron restriction. This observation indicated that a common iron uptake pathway, or a common intermediate, for hydroxamate- and catechol-based siderophores may exist in A. pleuropneumoniae.

  9. Accumulation of rare earth elements by siderophore-forming Arthrobacter luteolus isolated from rare earth environment of Chavara, India

    Indian Academy of Sciences (India)

    E S Challaraj Emmanuel; T Ananthi; B Anandkumar; S Maruthamuthu

    2012-03-01

    In this study, Arthrobacter luteolus, isolated from rare earth environment of Chavara (Quilon district, Kerala, India), were found to produce catechol-type siderophores. The bacterial strain accumulated rare earth elements such as samarium and scandium. The siderophores may play a role in the accumulation of rare earth elements. Catecholate siderophore and low-molecular-weight organic acids were found to be present in experiments with Arthrobacter luteolus. The influence of siderophore on the accumulation of rare earth elements by bacteria has been extensively discussed.

  10. Basic types of nonuniformities and their manifestation in the galvanomagnetic properties of especially pure silicon

    Energy Technology Data Exchange (ETDEWEB)

    Ostroborodova, V.V.

    1987-12-01

    A method is proposed for analyzing the type of nonuniformities in a single-crystalline pure material based on the changes in the asymmetry resistances, determined from the magnitudes of the external potentials on the Hall contacts, in a magnetic field. By comparing their magnetic-field dependences with the analogous dependences of the Hall constant and of the resistivity, measured with different polarities of the voltage applied to the sample, it is shown that the asymmetry resistances are the parameters which are most sensitive to nonuniformity. It was found that nonuniformities of the compensation type, i.e., space-charge regions in which the minority carriers make an appreciable contribution to the Hall constant, are systematically manifested in crystals of especially pure high-resistance silicon. The effective Hall factors were calculated under the conditions of Hall bipolarity of the impurity conductivity and the results are compared with the experimental data.

  11. Catechol Siderophore Transport by Vibrio cholerae

    OpenAIRE

    Wyckoff, Elizabeth E.; Allred, Benjamin E.; Raymond, Kenneth N.; Payne, Shelley M

    2015-01-01

    Siderophores, small iron-binding molecules secreted by many microbial species, capture environmental iron for transport back into the cell. Vibrio cholerae synthesizes and uses the catechol siderophore vibriobactin and also uses siderophores secreted by other species, including enterobactin produced by Escherichia coli. E. coli secretes both canonical cyclic enterobactin and linear enterobactin derivatives likely derived from its cleavage by the enterobactin esterase Fes. We show here that V....

  12. Bacterial Siderophores and their Biotechnological applications

    Digital Repository Service at National Institute of Oceanography (India)

    Mohandass, C.

    similar in structure to the siderophores and disrupting their normal functioning is now possible. Research to find out more effective and preferably cheaper chelating agents than desferrioxamine for use in chelation therapy will no doubt continue. Our...). It is further confirmed by spectrophotometric assay (Shenker et al., 1992). Research on siderophores Siderophore synthesis, their structure, properties and uses have been studied from many terrestrial microorganisms (Teintze et al., 1981; Smith et. al., 1985...

  13. Optimised chronic infection models demonstrate that siderophore 'cheating' in Pseudomonas aeruginosa is context specific.

    Science.gov (United States)

    Harrison, Freya; McNally, Alan; da Silva, Ana C; Heeb, Stephan; Diggle, Stephen P

    2017-07-11

    The potential for siderophore mutants of Pseudomonas aeruginosa to attenuate virulence during infection, and the possibility of exploiting this for clinical ends, have attracted much discussion. This has largely been based on the results of in vitro experiments conducted in iron-limited growth medium, in which siderophore mutants act as social 'cheats:' increasing in frequency at the expense of the wild type to result in low-productivity, low-virulence populations dominated by mutants. We show that insights from in vitro experiments cannot necessarily be transferred to infection contexts. First, most published experiments use an undefined siderophore mutant. Whole-genome sequencing of this strain revealed a range of mutations affecting phenotypes other than siderophore production. Second, iron-limited medium provides a very different environment from that encountered in chronic infections. We conducted cheating assays using defined siderophore deletion mutants, in conditions designed to model infected fluids and tissue in cystic fibrosis lung infection and non-healing wounds. Depending on the environment, siderophore loss led to cheating, simple fitness defects, or no fitness effect at all. Our results show that it is crucial to develop defined in vitro models in order to predict whether siderophores are social, cheatable and suitable for clinical exploitation in specific infection contexts.The ISME Journal advance online publication, 11 July 2017; doi:10.1038/ismej.2017.103.

  14. Catechol Siderophore Transport by Vibrio cholerae.

    Science.gov (United States)

    Wyckoff, Elizabeth E; Allred, Benjamin E; Raymond, Kenneth N; Payne, Shelley M

    2015-09-01

    Siderophores, small iron-binding molecules secreted by many microbial species, capture environmental iron for transport back into the cell. Vibrio cholerae synthesizes and uses the catechol siderophore vibriobactin and also uses siderophores secreted by other species, including enterobactin produced by Escherichia coli. E. coli secretes both canonical cyclic enterobactin and linear enterobactin derivatives likely derived from its cleavage by the enterobactin esterase Fes. We show here that V. cholerae does not use cyclic enterobactin but instead uses its linear derivatives. V. cholerae lacked both a receptor for efficient transport of cyclic enterobactin and enterobactin esterase to promote removal of iron from the ferrisiderophore complex. To further characterize the transport of catechol siderophores, we show that the linear enterobactin derivatives were transported into V. cholerae by either of the catechol siderophore receptors IrgA and VctA, which also transported the synthetic siderophore MECAM [1,3,5-N,N',N″-tris-(2,3-dihydroxybenzoyl)-triaminomethylbenzene]. Vibriobactin is transported via the additional catechol siderophore receptor ViuA, while the Vibrio fluvialis siderophore fluvibactin was transported by all three catechol receptors. ViuB, a putative V. cholerae siderophore-interacting protein (SIP), functionally substituted for the E. coli ferric reductase YqjH, which promotes the release of iron from the siderophore in the bacterial cytoplasm. In V. cholerae, ViuB was required for the use of vibriobactin but was not required for the use of MECAM, fluvibactin, ferrichrome, or the linear derivatives of enterobactin. This suggests the presence of another protein in V. cholerae capable of promoting the release of iron from these siderophores. Vibrio cholerae is a major human pathogen and also serves as a model for the Vibrionaceae, which include other serious human and fish pathogens. The ability of these species to persist and acquire essential

  15. Catechol Siderophore Transport by Vibrio cholerae

    Science.gov (United States)

    Allred, Benjamin E.; Raymond, Kenneth N.; Payne, Shelley M.

    2015-01-01

    ABSTRACT Siderophores, small iron-binding molecules secreted by many microbial species, capture environmental iron for transport back into the cell. Vibrio cholerae synthesizes and uses the catechol siderophore vibriobactin and also uses siderophores secreted by other species, including enterobactin produced by Escherichia coli. E. coli secretes both canonical cyclic enterobactin and linear enterobactin derivatives likely derived from its cleavage by the enterobactin esterase Fes. We show here that V. cholerae does not use cyclic enterobactin but instead uses its linear derivatives. V. cholerae lacked both a receptor for efficient transport of cyclic enterobactin and enterobactin esterase to promote removal of iron from the ferrisiderophore complex. To further characterize the transport of catechol siderophores, we show that the linear enterobactin derivatives were transported into V. cholerae by either of the catechol siderophore receptors IrgA and VctA, which also transported the synthetic siderophore MECAM [1,3,5-N,N′,N″-tris-(2,3-dihydroxybenzoyl)-triaminomethylbenzene]. Vibriobactin is transported via the additional catechol siderophore receptor ViuA, while the Vibrio fluvialis siderophore fluvibactin was transported by all three catechol receptors. ViuB, a putative V. cholerae siderophore-interacting protein (SIP), functionally substituted for the E. coli ferric reductase YqjH, which promotes the release of iron from the siderophore in the bacterial cytoplasm. In V. cholerae, ViuB was required for the use of vibriobactin but was not required for the use of MECAM, fluvibactin, ferrichrome, or the linear derivatives of enterobactin. This suggests the presence of another protein in V. cholerae capable of promoting the release of iron from these siderophores. IMPORTANCE Vibrio cholerae is a major human pathogen and also serves as a model for the Vibrionaceae, which include other serious human and fish pathogens. The ability of these species to persist and

  16. Siderophore Biosynthesis Governs the Virulence of Uropathogenic Escherichia coli by Coordinately Modulating the Differential Metabolism.

    Science.gov (United States)

    Su, Qiao; Guan, Tianbing; He, Yan; Lv, Haitao

    2016-04-01

    Urinary tract infections impose substantial health burdens on women worldwide. Urinary tract infections often incur a high risk of recurrence and antibiotic resistance, and uropathogenic E. coli accounts for approximately 80% of clinically acquired cases. The diagnosis of, treatment of, and drug development for urinary tract infections remain substantial challenges due to the complex pathogenesis of this condition. The clinically isolated UPEC 83972 strain was found to produce four siderophores: yersiniabactin, aerobactin, salmochelin, and enterobactin. The biosyntheses of some of these siderophores implies that the virulence of UPEC is mediated via the targeting of primary metabolism. However, the differential modulatory roles of siderophore biosyntheses on the differential metabolomes of UPEC and non-UPEC strains remain incompletely understood. In the present study, we sought to investigate how the differential metabolomes can be used to distinguish UPEC from non-UPEC strains and to determine the associated regulatory roles of siderophore biosynthesis. Our results are the first to demonstrate that the identified differential metabolomes strongly differentiated UPEC from non-UPEC strains. Furthermore, we performed metabolome assays of mutants with different patterns of siderophore deletions; the data revealed that the mutations of all four siderophores exerted a stronger modulatory role on the differential metabolomes of the UPEC and non-UPEC strains relative to the mutation of any single siderophore and that this modulatory role primarily involved amino acid metabolism, oxidative phosphorylation in the carbon fixation pathway, and purine and pyrimidine metabolism. Surprisingly, the modulatory roles were strongly dependent on the type and number of mutated siderophores. Taken together, these results demonstrated that siderophore biosynthesis coordinately modulated the differential metabolomes and thus may indicate novel targets for virulence-based diagnosis

  17. A primary pure pancreatic-type acinar cell carcinoma of the stomach: a case report.

    Science.gov (United States)

    Kim, Kyoung Min; Kim, Chan Young; Hong, Seung-Mo; Jang, Kyu Yun

    2017-01-19

    Acinar cell carcinoma represents only 1-2% of exocrine pancreatic neoplasms. On exceptionally rare occasions, primary acinar cell carcinoma can occur in ectopic locations. Herein, we report a case of pure pancreatic-type acinar cell carcinoma arising in the stomach. A 54-year-old male presented with a gastric submucosal mass detected by endoscopic examination. Laparoscopic wedge resection was performed. Macroscopically, the 2.7 cm yellowish mass was located in the submucosa of the stomach. Microscopically, the tumor was well circumscribed and had a homogeneous acinar architecture. The tumor cells were small and had a minimal amount of cytoplasm. The nuclei of the tumor cells were round to oval with finely dispersed chromatin. The tumor cells were strongly positive for α1-antitrypsin, chymotrypsin, and α1-antichymotrypsin immunostaining, consistent with pancreatic exocrine differentiation. There was no clinical or radiologic evidence of primary pancreatic or head and neck tumors. After surgical resection of the tumor, there was no recurrence or metastasis during 33 months follow-up. In this report, we have presented a rare case of primary pure pancreatic-type acinar cell carcinoma arising in the stomach and suggest that it could be helpful if the pathologist were aware that pancreatic-type acinar cell carcinoma could arise in the stomach as a polypoid submucosal tumor in the routine diagnostic field of gastric endoscopy.

  18. STUDY OF CATECHOL SIDEROPHORE FROM A NEWLY ISOLATED Azotobacter sp. SUP-III FOR ITS ANTIMICROBIAL PROPERTY

    Directory of Open Access Journals (Sweden)

    Shirishkumar Supanekar

    2013-12-01

    Full Text Available In present study, the isolate SUP III showed maximum siderophore production in Burk’s medium with maximum 43% decolorization of CAS reagent in liquid CAS assay. Optimum yield of siderophore was obtained at pH 7.2. The culture was identified as Azotobacter sp. based on 16S rRNA gene sequencing and phylogenetic studies using MEGA 4. The siderophore extraction and purification was achieved using XAD2 column. Colorimetric reactions prove that purified siderophore is of catecholate type. Fourier – transform infrared (FTIR analysis showed peaks at 3402 cm-1, 1652 cm-1, 1032 cm-1, and 1112 cm-1 which supported the colorimetric results. Antimicrobial activity of the purified siderophore showed significant zones of inhibition for some pathogens. This type of study has not been previously reported in this area.

  19. Systematic experimental study of pure shear type dielectric elastomer membranes with different electrode and film thicknesses

    Science.gov (United States)

    Hodgins, M.; Seelecke, S.

    2016-09-01

    An approach to reduce the voltage required for dielectric elastomer actuators is to reduce film thickness. However, if the electrode thickness is not similarly reduced, the electrode’s mechanical behavior can increasingly and negatively impact the overall actuator behavior. This effect is yet to be studied and quantified for pure shear type specimens; a type recommended in a recent DE standardization journal publication. Therefore, in this work, using pure shear specimens, a comparative study of membrane actuators of different film thickness (20, 50 and 100 μm) is performed. Electrodes of different thicknesses are screen printed and tested in a uniaxial test device. The stiffening effect due to the solid-state electrodes is demonstrated by performing force-elongation tests for specimens with and without electrodes. Additionally the importance of thin electrodes (relative to film thickness) was demonstrated through a number of electromechanical tests. Isotonic tests revealed a lower electro-mechanical sensitivity for the 20 μm film when compared with the 50 and 100 μm films. This was attributed to the relatively thick electrodes. Best actuation results were achieved when the total electrode thickness was at least 15x thinner than the dielectric membrane thickness.

  20. Iron(III)–siderophore coordination chemistry: Reactivity of marine siderophores

    OpenAIRE

    Butler, Alison; Theisen, Roslyn M.

    2010-01-01

    Two remarkable features of many siderophores produced by oceanic bacteria are the prevalence of an α-hydroxy-carboxylic acid functionality either in the form of the amino acid β-hydroxy aspartic acid or in the form of citric acid, as well as the predominance of amphiphilic siderophores. This review will provide an overview of the photoreactivity that takes place when siderophores containing β-hydroxy aspartic acid and citric acid are coordinated to iron(III). This photoreactivity raises quest...

  1. Contribution to modeling the viscosity Arrhenius-type equation for saturated pure fluids

    Science.gov (United States)

    Tian, Jianxiang; Zhang, Laibin

    2016-09-01

    Recently, Haj-Kacem et al. proposed an equation modeling the relationship between the two parameters of viscosity Arrhenius-type equations [Fluid Phase Equilibria 383, 11 (2014)]. The authors found that the two parameters are dependent upon each other in an exponential function form. In this paper, we reconsidered their ideas and calculated the two parameter values for 49 saturated pure fluids by using the experimental data in the NIST WebBook. Our conclusion is different with the ones of Haj-Kacem et al. We found that (the linearity shown by) the Arrhenius equation stands strongly only in low temperature range and that the two parameters of the Arrhenius equation are independent upon each other in the whole temperature range from the triple point to the critical point.

  2. Production and Characterization of Desmalonichrome Relative Binding Affinity for Uranyl Ions in Relation to Other Siderophores

    Energy Technology Data Exchange (ETDEWEB)

    Mo, Kai-For; Dai, Ziyu; Wunschel, David S.

    2016-06-24

    Siderophores are Fe binding secondary metabolites that have been investigated for their uranium binding properties. Much of the previous work has focused on characterizing hydroxamate types of siderophores, such as desferrioxamine B, for their uranyl binding affinity. Carboxylate forms of these metabolites hold potential to be more efficient chelators of uranyl, yet they have not been widely studied and are more difficult to obtain. Desmalonichrome is a carboxylate siderophore which is not commercially available and so was obtained from the ascomycete fungus Fusarium oxysporum cultivated under Fe depleted conditions. The relative affinity for uranyl binding of desmalonichrome was investigated using a competitive analysis of binding affinities between uranyl acetate and different concentrations of iron(III) chloride using electrospray ionization mass spectrometry (ESI-MS). In addition to desmalonichrome, three other siderophores, including two hydroxamates (desferrioxamine B and desferrichrome) and one carboxylate (desferrichrome A) were studied to understand their relative affinities for the uranyl ion at two pH values. The binding affinities of hydroxymate siderophores to uranyl ion were found to decrease to a greater degree at lower pH as the concentration of Fe (III) ion increases. On the other hand, lowering pH has little impact on the binding affinities between carboxylate siderophores and uranyl ion. Desmalonichrome was shown to have the greatest relative affinity for uranyl at any pH and Fe(III) concentration. These results suggest that acidic functional groups in the ligands are critical for strong chelation with uranium at lower pH.

  3. Azospirillum brasilense siderophores with antifungal activity against Colletotrichum acutatum.

    Science.gov (United States)

    Tortora, María L; Díaz-Ricci, Juan C; Pedraza, Raúl O

    2011-04-01

    Anthracnose, caused by the fungus Colletotrichum acutatum is one of the most important diseases in strawberry crop. Due to environmental pollution and resistance produced by chemical fungicides, nowadays biological control is considered a good alternative for crop protection. Among biocontrol agents, there are plant growth-promoting bacteria, such as members of the genus Azospirillum. In this work, we demonstrate that under iron limiting conditions different strains of A. brasilense produce siderophores, exhibiting different yields and rates of production according to their origin. Chemical assays revealed that strains REC2 and REC3 secrete catechol type siderophores, including salicylic acid, detected by thin layer chromatography coupled with fluorescence spectroscopy and gas chromatography-mass spectrometry analysis. Siderophores produced by them showed in vitro antifungal activity against C. acutatum M11. Furthermore, this latter coincided with results obtained from phytopathological tests performed in planta, where a reduction of anthracnose symptoms on strawberry plants previously inoculated with A. brasilense was observed. These outcomes suggest that some strains of A. brasilense could act as biocontrol agent preventing anthracnose disease in strawberry.

  4. Three-dimensional pure deflagration models with nucleosynthesis and synthetic observables for Type Ia supernovae

    CERN Document Server

    Fink, M; Seitenzahl, I R; Ciaraldi-Schoolmann, F; Roepke, F K; Sim, S A; Pakmor, R; Ruiter, A J; Hillebrandt, W

    2013-01-01

    We investigate whether pure deflagration models of Chandrasekhar-mass carbon-oxygen white dwarf stars can account for one or more sub-class of the observed population of Type Ia supernova (SN Ia) explosions. We compute a set of three-dimensional full-star hydrodynamic explosion models, in which the deflagration strength is parametrized using the multi-spot ignition approach. For each model, we calculate detailed nucleosynthesis yields in a post-processing step with a 384 nuclide nuclear network. We also compute synthetic observables with our three-dimensional Monte-Carlo radiative transfer code for comparison with observations. For weak and intermediate deflagration strengths (energy release E_nuc <~ 1.1 x 10^51 erg), we find that the explosion leaves behind a bound remnant enriched with 3 to 10 per cent (by mass) of deflagration ashes. However, we do not obtain the large kick velocities recently reported in the literature. We find that weak deflagrations with E_nuc ~ 0.5 x 10^51 erg fit well both the ligh...

  5. Siderophore production by uropathogenic Escherichia coli

    Directory of Open Access Journals (Sweden)

    Vagrali Manjula

    2009-01-01

    Full Text Available Urinary tract infection (UTI is one of the most frequently encountered problems in ambulatory medicine. The present study was designed to determine siderophore production as the urovirulence factor of Escherichia coli isolated from the patients of UTI. A total of 160 strains of E. coli isolated from urine of patients with clinically diagnosed UTI were included in the study and 50 fecal isolates of E. coli, siderophore production was seen in 156 (97.5%. In 50 fecal isolates, siderophore production was seen in 2 (4%. Siderophore production has been shown to be more frequent in E. coli from patients with UTI, than in fecal isolates. The results suggest that siderophore production positive strains can be considered as UPEC. Thus, although a great deal has been learned regarding E. coli virulence mechanisms in UTI, much remains to be learned and the practical application of our growing understanding of E. coli virulence factors to the prevention and treatment of UTI has to be continued.

  6. Genome mining and functional genomics for siderophore production in Aspergillus niger.

    Science.gov (United States)

    Franken, Angelique C W; Lechner, Beatrix E; Werner, Ernst R; Haas, Hubertus; Lokman, B Christien; Ram, Arthur F J; van den Hondel, Cees A M J J; de Weert, Sandra; Punt, Peter J

    2014-11-01

    Iron is an essential metal for many organisms, but the biologically relevant form of iron is scarce because of rapid oxidation resulting in low solubility. Simultaneously, excessive accumulation of iron is toxic. Consequently, iron uptake is a highly controlled process. In most fungal species, siderophores play a central role in iron handling. Siderophores are small iron-specific chelators that can be secreted to scavenge environmental iron or bind intracellular iron with high affinity. A second high-affinity iron uptake mechanism is reductive iron assimilation (RIA). As shown in Aspergillus fumigatus and Aspergillus nidulans, synthesis of siderophores in Aspergilli is predominantly under control of the transcription factors SreA and HapX, which are connected by a negative transcriptional feedback loop. Abolishing this fine-tuned regulation corroborates iron homeostasis, including heme biosynthesis, which could be biotechnologically of interest, e.g. the heterologous production of heme-dependent peroxidases. Aspergillus niger genome inspection identified orthologues of several genes relevant for RIA and siderophore metabolism, as well as sreA and hapX. Interestingly, genes related to synthesis of the common fungal extracellular siderophore triacetylfusarinine C were absent. Reverse-phase high-performance liquid chromatography (HPLC) confirmed the absence of triacetylfusarinine C, and demonstrated that the major secreted siderophores of A. niger are coprogen B and ferrichrome, which is also the dominant intracellular siderophore. In A. niger wild type grown under iron-replete conditions, the expression of genes involved in coprogen biosynthesis and RIA was low in the exponential growth phase but significantly induced during ascospore germination. Deletion of sreA in A. niger resulted in elevated iron uptake and increased cellular ferrichrome accumulation. Increased sensitivity toward phleomycin and high iron concentration reflected the toxic effects of excessive

  7. Exchange of iron by gallium in siderophores.

    Science.gov (United States)

    Emery, T

    1986-08-12

    Siderophores are iron transport compounds produced by numerous microorganisms and which strongly chelate Fe(III), but not Fe(II). Other trivalent metals, such as Al(III), Cr(III), or Ga(III), are not capable of significantly displacing iron from siderophores. However, I demonstrate here that Ga(III) can effectively displace iron under reducing conditions. With ascorbate as reductant and ferrozine as Fe(II) trapping agent, the kinetics of reductive displacement of iron by Ga(III) were followed spectroscopically by the increase of absorbance at 562 nm due to formation of the Fe(II)-ferrozine complex. No significant reduction of siderophore occurred in the absence of Ga(III). With excess Ga(III), the displacement was quantitative and very rapid. The rate of metal exchange was pseudo first order with respect to Ga(III) concentration and highly pH dependent, suggesting that siderophore ligands are displaced from the iron in a concerted mechanism by Ga(III) and protonation to expose the Fe(III) to reduction by ascorbate. Reaction rates were dependent upon the structure of the siderophore, being greatest for ferric rhodotorulic acid and slowest for ferrichrome A at pH 5.4. The pH profile for ferric rhodotorulic acid was unusual in that it showed a maximum at pH 6.5, while all other siderophores examined showed an increase in rate as pH was lowered from 7.0. The physiological significance of this reaction to the clinical use of gallium is discussed.

  8. Hydroxamate siderophore synthesis by Phialocephala fortinii, a typical dark septate fungal root endophyte.

    Science.gov (United States)

    Bartholdy; Berreck, M; Haselwandter, K

    2001-03-01

    The siderophore production of various isolates of Phialocephala fortinii was assessed quantitatively as well as qualitatively in batch assays under pure culture conditions at different pH values and iron(III) concentrations. We found a distinct effect of both of these parameters on siderophore synthesis and as well as on fungal growth. In comparative analyses of two of the isolates, maximum siderophore production was found at a pH in the range of pH 4.0 to 4.5 while, under the experimental conditions employed, the optimal concentration of ferric iron was determined to be between 20-40 microg iron (III) l(-1) (0.36-0.72 microM, respectively). HPLC analysis of the culture filtrate of most of the isolates of P. fortinii revealed the excretion of ferricrocin as main hydroxamate siderophore, followed by ferrirubin and ferrichrome C. The pattern of release of these three substances proved to be dependent on pH and iron(III) concentration of the culture medium, and to be specific for each isolate under investigation.

  9. Production, purification and chemical characterization of the catecholate siderophore from potent probiotic strains of Bacillus spp.

    Science.gov (United States)

    Patel, Anil K; Deshattiwar, Maroti K; Chaudhari, Bhushan L; Chincholkar, Sudhir B

    2009-01-01

    The aim of the present study was to characterize the probiotic qualities of Bacillus isolates and study their siderophore prior to possible siderophoregenic probiotic application for iron nutrition in animals and humans. Bacillus strains were selectively isolated from dairy waste and mango pulp waste. Best two siderophore positive isolates, JHT3 and DET6 showed high homology with Bacillus megaterium (98%) and B. subtilis (99%), respectively, using partial 16S-rRNA sequencing and biochemical characterization. These isolates produced catecholate type of siderophore under iron stressed conditions and were screened for probiotic properties as per WHO and FAO guidelines. Spores of these strains showed excellent tolerance in partially simulated gastrointestinal tract conditions and exhibited antimicrobial activity against organisms such as Staphylococcus aureus, Micrococcus flavus and Escherichia coli. Importantly, these isolates were susceptible to the most of the antibiotics tested, in conflict that they would not donate resistance determinants if administered in the form of probiotic preparations.

  10. Gram-positive siderophore-shuttle with iron-exchange from Fe-siderophore to apo-siderophore by Bacillus cereus YxeB.

    Science.gov (United States)

    Fukushima, Tatsuya; Allred, Benjamin E; Sia, Allyson K; Nichiporuk, Rita; Andersen, Ulla N; Raymond, Kenneth N

    2013-08-20

    Small molecule iron-chelators, siderophores, are very important in facilitating the acquisition of Fe(III), an essential element for pathogenic bacteria. Many Gram-negative outer-membrane transporters and Gram-positive lipoprotein siderophore-binding proteins have been characterized, and the binding ability of outer-membrane transporters and siderophore-binding proteins for Fe-siderophores has been determined. However, there is little information regarding the binding ability of these proteins for apo-siderophores, the iron-free chelators. Here we report that Bacillus cereus YxeB facilitates iron-exchange from Fe-siderophore to apo-siderophore bound to the protein, the first Gram-positive siderophore-shuttle system. YxeB binds ferrioxamine B (FO, Fe-siderophore)/desferrioxamine B (DFO, apo-siderophore) in vitro. Disc-diffusion assays and growth assays using the yxeB mutant reveal that YxeB is responsible for importing the FO. Cr-DFO (a FO analog) is bound by YxeB in vitro and B. cereus imports or binds Cr-DFO in vivo. In vivo uptake assays using Cr-DFO and FO and growth assays using DFO and Cr-DFO show that B. cereus selectively imports and uses FO when DFO is present. Moreover, in vitro competition assays using Cr-DFO and FO clearly demonstrate that YxeB binds only FO, not Cr-DFO, when DFO is bound to the protein. Iron-exchange from FO to DFO bound to YxeB must occur when DFO is initially bound by YxeB. Because the metal exchange rate is generally first order in replacement ligand concentration, protein binding of the apo-siderophore acts to dramatically enhance the iron exchange rate, a key component of the Gram-positive siderophore-shuttle mechanism.

  11. Siderophore and organic acid production in root nodule bacteria.

    Science.gov (United States)

    Carson, K C; Holliday, S; Glenn, A R; Dilworth, M J

    1992-01-01

    Nineteen strains of root nodule bacteria were grown under various iron regimes (0.1, 1.0 and 20 microM added iron) and tested for catechol and hydroxamate siderophore production and the excretion of malate and citrate. The growth response of the strains to iron differed markedly. For 12 strains (Bradyrhizobium strains NC92B and 32H1, B. japonicum USDA110 and CB1809, B. lupini WU8, cowpea Rhizobium NGR234, Rhizobium meliloti strains U45 and CC169, Rhizobium leguminosarum bv viciae WU235 and Rhizobium leguminosarum bv trifolii strains TA1, T1 and WU95) the mean generation time showed no variation with the 200-fold increase in iron concentration. In contrast, in Bradyrhizobium strains NC921, CB756 and TAL1000, B. japonicum strain 61A76 and R. leguminosarum bv viciae MNF300 there was a 2-5 fold decrease in growth rate at low iron. R. meliloti strains WSM419 and WSM540 showed decreased growth at high iron. All strains of root nodule bacteria tested gave a positive CAS (chrome azurol S) assay for siderophore production. No catechol-type siderophores were found in any strain, and only R. leguminosarum bv trifolii T1 and bv viciae WU235 produced hydroxamate under low iron (0.1 and 1.0 microM added iron). Malate was excreted by all strains grown under all iron regimes. Citrate was excreted by B. japonicum USDA110 and B. lupini WU8 in all iron concentrations, while Bradyrhizobium TAL1000, R. leguminosarum bv viciae MNF300 and B. japonicum 61A76 only produced citrate under low iron (0.1 and/or 1.0 microM added iron) during the stationary phase of growth.

  12. Biotechnology of siderophores in high-impact scientific fields.

    Science.gov (United States)

    De Serrano, Luis O

    2017-09-26

    Different aspects of bacterial and fungal siderophore biotechnological applications will be discussed. Areas of application presented include, but are not limited to agriculture, medicine, pharmacology, bioremediation, biodegradation and food industry. In agriculture-related applications, siderophores could be employed to enhance plant growth due to their uptake by rhizobia. Siderophores hindered the presence of plant pathogens in biocontrol strategies. Bioremediation studies on siderophores discuss mostly the mobilization of heavy metals and radionuclides; the emulsifying effects of siderophore-producing microorganisms in oil-contaminated environments are also presented. The different applications found in literature based in medicine and pharmacological approaches range from iron overload to drug delivery systems and, more recently, vaccines. Additional research should be done in siderophore production and their metabolic relevance to have a deeper understanding for future biotechnological advances.

  13. Reductive iron assimilation and intracellular siderophores assist extracellular siderophore-driven iron homeostasis and virulence

    Science.gov (United States)

    Iron is an essential nutrient and prudent iron acquisition and management are key traits of a successful pathogen. Fungi use nonribosomally synthesized secreted iron chelators (siderophores) or Reductive Iron Assimilation (RIA) mechanisms to acquire iron in a high affinity manner. Previous studies...

  14. Influence of downsizing of zeolite crystals on the orthorhombic ↔ monoclinic phase transition in pure silica MFI-type

    Science.gov (United States)

    Kabalan, Ihab; Michelin, Laure; Rigolet, Séverinne; Marichal, Claire; Daou, T. Jean; Lebeau, Bénédicte; Paillaud, Jean-Louis

    2016-08-01

    The impact of crystal size on the transition orthorhombic ↔ monoclinic phase in MFI-type purely silica zeolites is investigated between 293 and 473 K using 29Si MAS NMR and powder X-ray diffraction. Three silicalite-1 zeolites are synthesized: a material constituted of micron-sized crystals, pseudospherical nanometer-sized crystals and hierarchical porous zeolites with a mesoporous network created by the use of a gemini-type diquaternary ammonium surfactant giving nanosheet zeolites. Our results show for the first time that the orthorhombic ↔ monoclinic phase transition already known for micron-sized particles also occurs in nanometer-sized zeolite crystals whereas our data suggest that the extreme downsizing of the zeolite crystal to one unit cell in thickness leads to an extinction of the phase transition.

  15. Uranium extraction by complexation with siderophores

    Science.gov (United States)

    Bahamonde Castro, Cristina

    One of the major concerns of energy production is the environmental impact associated with the extraction of natural resources. Nuclear energy fuel is obtained from uranium, an abundant and naturally occurring element in the environment, but the currently used techniques for uranium extraction leave either a significant fingerprint (open pit mines) or a chemical residue that alters the pH of the environment (acid or alkali leaching). It is therefore clear that a new and greener approach to uranium extraction is needed. Bioleaching is one potential alternative. In bioleaching, complexants naturally produced from fungi or bacteria may be used to extract the uranium. In the following research, the siderophore enterobactin, which is naturally produced by bacteria to extract and solubilize iron from the environment, is evaluated to determine its potential for complexing with uranium. To determine whether enterobactin could be used for uranium extraction, its acid dissociation and its binding strength with the metal of interest must be determined. Due to the complexity of working with radioactive materials, lanthanides were used as analogs for uranium. In addition, polyprotic acids were used as structural and chemical analogs for the siderophore during method development. To evaluate the acid dissociation of enterobactin and the subsequent binding constants with lanthanides, three different analytical techniques were studied including: potentiometric titration, UltraViolet Visible (UV-Vis) spectrophotometry and Isothermal Titration Calorimetry (ITC). After evaluation of three techniques, a combination of ITC and potentiometric titrations was deemed to be the most viable way for studying the siderophore of interest. The results obtained from these studies corroborate the ideal pH range for enterobactin complexation to the lanthanide of interest and pave the way for determining the strength of complexation relative to other naturally occurring metals. Ultimately, this

  16. Characterization of a Bacillus subtilis transporter for petrobactin, an anthrax stealth siderophore

    Energy Technology Data Exchange (ETDEWEB)

    Zawadzka, A. M.; Kim, Y.; Maltseva, N; Nichiporuk, R; Fan, Y; Joachimiak, A; Raymond, KN (Biosciences Division); (Univ. of California)

    2009-12-22

    Iron deprivation activates the expression of components of the siderophore-mediated iron acquisition systems in Bacillus subtilis, including not only the synthesis and uptake of its siderophore bacillibactin but also expression of multiple ABC transporters for iron scavenging using xenosiderophores. The yclNOPQ operon is shown to encode the complete transporter for petrobactin (PB), a photoreactive 3,4-catecholate siderophore produced by many members of the B. cereus group, including B. anthracis. Isogenic disruption mutants in the yclNOPQ transporter, including permease YclN, ATPase YclP, and a substrate-binding protein YclQ, are unable to use either PB or the photoproduct of FePB (FePB{sup {nu}}) for iron delivery and growth, in contrast to the wild-type B. subtilis. Complementation of the mutations with the copies of the respective genes restores this capability. The YclQ receptor binds selectively iron-free and ferric PB, the PB precursor, 3,4-dihydroxybenzoic acid (3,4-DHB), and FePB{sup {nu}} with high affinity; the ferric complexes are seen in ESI-MS, implying strong electrostatic interaction between the protein-binding pocket and siderophore. The first structure of a Gram-positive siderophore receptor is presented. The 1.75-{angstrom} crystal structure of YclQ reveals a bilobal periplasmic binding protein (PBP) fold consisting of two {alpha}/{beta}/{alpha} sandwich domains connected by a long {alpha}-helix with the binding pocket containing conserved positively charged and aromatic residues and large enough to accommodate FePB. Orthologs of the B. subtilis PB-transporter YclNOPQ in PB-producing Bacilli are likely contributors to the pathogenicity of these species and provide a potential target for antibacterial strategies.

  17. Characterization of a Bacillus subtilis transporter for petrobactin, an anthrax stealth siderophore.

    Science.gov (United States)

    Zawadzka, Anna M; Kim, Youngchang; Maltseva, Natalia; Nichiporuk, Rita; Fan, Yao; Joachimiak, Andrzej; Raymond, Kenneth N

    2009-12-22

    Iron deprivation activates the expression of components of the siderophore-mediated iron acquisition systems in Bacillus subtilis, including not only the synthesis and uptake of its siderophore bacillibactin but also expression of multiple ABC transporters for iron scavenging using xenosiderophores. The yclNOPQ operon is shown to encode the complete transporter for petrobactin (PB), a photoreactive 3,4-catecholate siderophore produced by many members of the B. cereus group, including B. anthracis. Isogenic disruption mutants in the yclNOPQ transporter, including permease YclN, ATPase YclP, and a substrate-binding protein YclQ, are unable to use either PB or the photoproduct of FePB (FePB(nu)) for iron delivery and growth, in contrast to the wild-type B. subtilis. Complementation of the mutations with the copies of the respective genes restores this capability. The YclQ receptor binds selectively iron-free and ferric PB, the PB precursor, 3,4-dihydroxybenzoic acid (3,4-DHB), and FePB(nu) with high affinity; the ferric complexes are seen in ESI-MS, implying strong electrostatic interaction between the protein-binding pocket and siderophore. The first structure of a gram-positive siderophore receptor is presented. The 1.75-A crystal structure of YclQ reveals a bilobal periplasmic binding protein (PBP) fold consisting of two alpha/beta/alpha sandwich domains connected by a long alpha-helix with the binding pocket containing conserved positively charged and aromatic residues and large enough to accommodate FePB. Orthologs of the B. subtilis PB-transporter YclNOPQ in PB-producing Bacilli are likely contributors to the pathogenicity of these species and provide a potential target for antibacterial strategies.

  18. Simulation of pure and defective wurtzite-type ZnO

    Energy Technology Data Exchange (ETDEWEB)

    Maldonado, Frank; Stashans, Arvids [Grupo de FisicoquImica de Materiales, Instituto de Quimica Aplicada, Universidad Tecnica Particular de Loja, Apartado 11-01-608, Loja (Ecuador)], E-mail: arvids@utpl.edu.ec

    2009-12-15

    Changes in the structural and electronic properties of zinc oxide (ZnO) due to the O vacancy and F-centre were studied using a semi-empirical quantum-chemical approach based on Hartree-Fock theory. A periodic supercell of 128 atoms was exploited throughout the study. The semi-empirical parameters for the Zn atom are obtained by reproducing the main properties of the ZnO crystal as well as the first three ionization potentials of the Zn atom. The perturbation imposed by the defect leads to atomic relaxation, which is computed and discussed in detail. It is found that electron density redistribution in the vicinity of defects plays an important role in the determination of atomic movements. The introduction of an oxygen vacancy generates a local one-electron energy level placed below the conduction band while the presence of an F-centre produces a local energy level just above the upper valence band of the material. The deep situation of the local energy level corresponding to the F-centre implies that the F-centre cannot serve as a source of unintentional n-type electrical conductivity in ZnO. Changes in the chemical bonding are observed, showing that it becomes slightly more covalent because of oxygen-vacancy-type defects.

  19. Identification of a siderophore utilization locus in nontypeable Haemophilus influenzae

    Directory of Open Access Journals (Sweden)

    Seale Thomas W

    2010-04-01

    Full Text Available Abstract Background Haemophilus influenzae has an absolute aerobic growth requirement for either heme, or iron in the presence of protoporphyrin IX. Both iron and heme in the mammalian host are strictly limited in their availability to invading microorganisms. Many bacterial species overcome iron limitation in their environment by the synthesis and secretion of small iron binding molecules termed siderophores, which bind iron and deliver it into the bacterial cell via specific siderophore receptor proteins on the bacterial cell surface. There are currently no reports of siderophore production or utilization by H. influenzae. Results Comparative genomics revealed a putative four gene operon in the recently sequenced nontypeable H. influenzae strain R2846 that encodes predicted proteins exhibiting significant identity at the amino acid level to proteins involved in the utilization of the siderophore ferrichrome in other bacterial species. No siderophore biosynthesis genes were identified in the R2846 genome. Both comparative genomics and a PCR based analysis identified several additional H. influenzae strains possessing this operon. In growth curve assays strains containing the genes were able to utilize ferrichrome as an iron source. H. influenzae strains lacking the operon were unable to obtain iron from ferrichrome. An insertional mutation in one gene of the operon abrogated the ability of strains to utilize ferrichrome. In addition transcription of genes in the identified operon were repressible by high iron/heme levels in the growth media. Conclusions We have identified an iron/heme-repressible siderophore utilization locus present in several nontypeable H. influenzae strains. The same strains do not possess genes encoding proteins associated with siderophore synthesis. The siderophore utilization locus may enable the utilization of siderophores produced by other microorganisms in the polymicrobial environmental niche of the human nasopharynx

  20. Transcriptional analysis of the Bordetella alcaligin siderophore biosynthesis operon.

    Science.gov (United States)

    Kang, H Y; Armstrong, S K

    1998-02-01

    The alc gene cluster of Bordetella pertussis includes three genes, alcA, alcB, and alcC, which are involved in alcaligin siderophore biosynthesis in response to iron starvation. The production of AlcA, AlcB, and AlcC in Bordetella cells and the transcriptional organization of alcA, alcB, and alcC were investigated by using a set of three alc'-'lacZ gene fusion constructs that were contiguous with the known promoter upstream of alcA and extended to fusion junctions within each alc cistron. All three alc'-'lacZ fusions exhibited iron-repressible reporter gene expression which was abolished by deletion of the 105-bp alcA promoter-operator region. In an immunoblot analysis using a monoclonal antibody specific for beta-galactosidase, the AlcA-LacZ, AlcB-LacZ, and AlcC-LacZ hybrid proteins were detected in Bordetella cells grown under iron-depleted conditions. A B. pertussis mutant in which the 105-bp alcA promoter-operator region was deleted by allelic exchange was unable to produce detectable levels of siderophore. Hybridization analysis using gene-specific probes showed that alc-specific transcript levels in the mutant were negligible compared with those of the wild-type parent. These results confirm that alcA, alcB, and alcC are cotranscribed from an iron-regulated control region immediately upstream of alcA. Transcript analysis using hybridization probes representing regions downstream of alcC demonstrated that alc transcription extends approximately 3.6 kb further downstream from the alcC coding region, suggesting the cotranscription of additional, uncharacterized alcaligin system genes.

  1. Mechanism of Non-Steady State Dissolution of Goethite in the Presence of Siderophores

    Science.gov (United States)

    Reichard, P. U.; Kretzschmar, R.; Kraemer, S. M.

    2003-12-01

    reproducible and the magnitude of dissolved iron corresponds to the reaction time of goethite with oxalate. Analogous non-steady state experiments were conducted, but with two other siderophores or citrate to induce non-steady state conditions: 40 microM of the bacterial siderophore desferrioxamine B (DFO-B), 40 microM of the fungal siderophore Ferrichrome, and 3 mM of citrate. Fast dissolution of iron was observed as a response to non-steady state. We also substituted the non-siderophore ligand oxalate by 500 microM citrate or 750 microM malonate and again observed fast dissolution after the non-steady state siderophore additions. Independent of the type of the ligands, a reproducible fast dissolution of iron followed by steady state dissolution was observed after the addition of the non-steady state ligand concentrations. Thus it can be said that the reproducible fast dissolution of iron under non-steady state conditions represents a general geochemical mechanism and an important process in the context of biological iron acquisition in natural systems. References Marschner, H., Roemheld, V. et al. (1986). "Different Strategies in Higher-Plants in Mobilization and Uptake of Iron". Journal of Plant Nutrition 9(3-7): 695-713. Roemheld, V. and Marschner, H. (1986)." Evidence for a Specific Uptake System for Iron Phytosiderophore in Roots of Grasses". Plant Physiology 80(1): 175-180.

  2. Fungal NRPS-dependent siderophores: From function to prediction

    DEFF Research Database (Denmark)

    Sørensen, Jens Laurids; Knudsen, Michael; Hansen, Frederik Teilfeldt

    2014-01-01

    discuss the function of siderophores in relation to fungal iron uptake mechanisms and their importance for coexistence with host organisms. The chemical nature of the major groups of siderophores and their regulation is described along with the function and architecture of the large multi-domain enzymes...... responsible for siderophore synthesis, namely the non-ribosomal peptide synthetases (NRPSs). Finally, we present the most recent advances in our understanding of the structural biology of fungal NRPSs and discuss opportunities for the development of a fungal NRPS prediction server...

  3. Fungal NRPS-dependent siderophores: From function to prediction

    DEFF Research Database (Denmark)

    Sørensen, Jens Laurids; Knudsen, Michael; Hansen, Frederik Teilfeldt

    2014-01-01

    discuss the function of siderophores in relation to fungal iron uptake mechanisms and their importance for coexistence with host organisms. The chemical nature of the major groups of siderophores and their regulation is described along with the function and architecture of the large multi-domain enzymes...... responsible for siderophore synthesis, namely the non-ribosomal peptide synthetases (NRPSs). Finally, we present the most recent advances in our understanding of the structural biology of fungal NRPSs and discuss opportunities for the development of a fungal NRPS prediction server...

  4. Six Siderophore-Producing Microorganisms Identified in Biological Soil Crusts

    Science.gov (United States)

    Noonan, K.; Anbar, A. D.; Garcia-Pichel, F.; Poret-peterson, A. T.; Hartnett, H. E.

    2011-12-01

    Biological soil crusts (BSCs) are diverse microbial communities that colonize soils in arid and semi-arid environments. Cyanobacteria in BSCs are pioneer organisms that increase ecosystem habitability by providing fixed carbon (C) and nitrogen (N) as well as by reducing water run-off and increasing infiltration. Photosynthesis and N fixation, in particular, require a variety of metals in large quantities, and yet, metals are predominantly insoluble in the environments where BSCs thrive. Therefore, BSC organisms must have efficient strategies for extracting metals from soil minerals. We hypothesized that BSC microbes, particularly the cyanobacteria, produce siderophores to serve their metal-acquisition needs. Siderophores are small organic compounds that bind Fe with high affinity and are produced by a variety of microorganisms, including cyanobacteria. Most siderophores bind Fe, primarily; however, some can also bind Mo, V, and Cu. Soil siderophores are released by microbes to increase the solubility of metals from minerals and to facilitate microbial uptake. Thus, siderophores serve as chemical weathering agents and provide a direct link between soil microbes and minerals. Studying siderophore production in BSCs provides insight into how BSCs tackle the challenge of acquiring insoluble metals, and may help conservationists determine useful fertilizers for BSC growth by facilitating metal acquisition. Biological soil crusts were collected near Moab, UT. Soil slurries were prepared in deionized water and transferred to modified BG-11 agar plates. The O-CAS agar plate assay was used to screen organisms for siderophore production. Siderophore producing microbes were isolated and identified by16S rRNA gene sequencing. Cultures were then grown in 3 L batch cultures under metal limitation, and siderophore presence was monitored using the traditional liquid CAS assay. After siderophore detection, cells were removed by centrifugation, organic compounds were separated using

  5. Extracellular siderophores of rapidly growing Aspergillus nidulans and Penicillium chrysogenum

    OpenAIRE

    Charlang, G; Horowitz, R M; Lowy, P H; Ng, B.; Poling, S M; Horowitz, N. H.

    1982-01-01

    The highly active extracellular siderophores previously detected in young cultures of Aspergillus nidulans and Penicillium chrysogenum have been identified as the cyclic ester fusigen (fusarinine C), and its open-chain form, fusigen B (fusarinine B).

  6. Identification of the hydroxamate siderophore ferricrocin in Cladosporium cladosporioides.

    Science.gov (United States)

    Pourhassan, Nina; Gagnon, René; Wichard, Thomas; Bellenger, Jean-Philippe

    2014-04-01

    The hydroxamate siderophore ferricrocin was identified in Cladosporium cladosporioides growth medium by solid phase extraction and ultra high pressure liquid chromatography coupled to a time of flight mass spectrometer (UHPLC/QTOF-MS). Both desferricrocin and ferricrocin were detected in the extracellular medium assisted by high resolution mass spectrometry. This is the first identification of a hydroxamate siderophore in Cladosporium cladosporioides. This finding emphasizes the common meaning of ferricrocin in fungi.

  7. Detection of mycobacterial siderophores and implications for diagnostics

    OpenAIRE

    McBride, Nicholas S.

    2012-01-01

    Mycobacterium tuberculosis (Mtb) is a pervasive human pathogen that continues to kill 1.8 million people every year. Acquisition of iron within the host is vital to the pathogenicity of Mtb and to accomplish this it produces siderophores called mycobactins and carboxymycobactins. This dissertation has sought to build a simple assay for detection and quantification of mycobacterial siderophores that has potential applications in tuberculosis (TB) diagnosis. This assay has been tested a...

  8. A series of pure inorganic eight-connected self-catenated network based on Silverton-type polyoxometalate

    Science.gov (United States)

    Tan, Huaqiao; Chen, Weilin; Li, Yang-Guang; Liu, Ding; Chen, Limin; Wang, Enbo

    2009-03-01

    In this paper, three pure inorganic eight-connected self-catenated networks based on the Silverton-type polyoxometalate [CeMo 12O 42] 8- with lanthanide, transition metal and alkali metal cations as linkers: [Li(H 2O) 4] 2Co(H 2O) 4Ce(H 2O) 3[CeMo 12O 42]·3H 2O (1), H 0.5[Li(H 2O) 4] 2.5[Ni(H 2O) 4] 0.5Ce(H 2O) 3[CeMo 12O 42]·3H 2O (2) and H[Li(H 2O) 4] 3Ce(H 2O) 3[CeMo 12O 42]·3H 2O (3) have been successfully synthesized and characterized by elemental analysis, IR spectroscopy, thermal gravimetric analysis, X-ray photoelectron spectroscopy, electrochemical analyses and single crystal X-ray diffraction. The single crystal X-ray diffraction analyses reveal that compounds 1- 3 are isostructural. The [Ce IVMo 12O 42] 8- polyoxoanions are connected by Ce 4+ to form the infinite 1D chains. And then the parallel stacking chains linked by transition metal cations and lithium ions construct to an eight-connected self-catenated 4 2456 3 topology framework.

  9. Effect of Dose-Response of Zinc and Manganese on Siderophores Production

    Directory of Open Access Journals (Sweden)

    Mehri Ines

    2012-01-01

    Full Text Available Problem statement: This study was conducted to find and determine whether the siderophores of the four environmental Pseudomonas spp. isolates possess a sequestering activity towards essential transition metals (Zn and Mn other than iron. Approach: Four fluorescent Pseudomonads isolated from various environments, were characterized analytically (Isoelectric focusing, biologically (pyoverdine-mediated uptake and genetically (16S rDNA sequencing. By means of spectrophotometric measurements, it was possible to establish and compare the levels of pyoverdine production, in two different nutrient-poor media. Results: The strains were assigned, by sequencing, to P. fluorescens, P. aeruginosa, P. putida and P. mosselii isolated, respectively from soil, compost, sea water and waste water treatment plant. These bacterial strains were recognized as producing diver’s yellow-green siderophores types, when grown under conditions of iron starvation. The highest metabolite concentration was obtained with PsC132 and PsTp171 strains isolated respectively from compost and waste water treatment plant, in CAA medium. Strains grown in CAA medium exhibit a higher PVD level compared to SM medium. Mn (II was found to promote pyoverdine biosynthesis, but rather, Zn (II had no significant effect on siderophore production when compared to control medium. For both strains PsS29 and PsC132, the increase of iron concentration quenched siderophore production especially above 20 μM. Pyoverdine level declined with the high concentration of zinc but increased with Manganese concentration ranging up to 70 μM (in case of PsC132 and 300 μM (in case of PsS29. Conclusion/Recommendations: The ability of fluorescent Pseudomonas, isolated from wastewater treatment plant and from compost, to sequester zinc, point to a unique advantage of these species for divers bioremediation applications.

  10. Production, optimization and probiotic characterization of potential lactic acid bacteria producing siderophores

    Directory of Open Access Journals (Sweden)

    Smita H. Panda

    2017-02-01

    Full Text Available The aim of the study was to characterize the probiotic qualities and siderophore production of Enterococcus and Bacillus isolates for possible application for iron nutrition in human and animals strains were selectively isolated from different dairy sources and infant faecal matter. Isolates SB10, JC13 and IFM22 were found to produce maximum siderophore ranging from 65–90% at an optimum pH 7, incubation period of 96 h, agitation speed of 150 rpm and inoculum volume of 15%. SB10 and JC13 were found to show high homology with Enterococcus spp. and IFM22 with Bacillus spp., using partial 16S rRNA sequencing and biochemical characterization. All the three isolates produced hydroxymate type of siderophores under iron stressed conditions and screened for probiotic characters as per WHO guidelines. Strains have shown excellent tolerance to acid, bile salt, sodium chloride and phenol. They were non-haemolytic in nature and exhibited high hydrophobicity and autoaggregation. Our isolates proved to be potent probiotic strains due to their survival under highly acidic conditions and higher tolerance to bile salt. In addition, its colonization efficiency was proved by exhibiting high autoaggregation and hydrophobicity.

  11. Adsorption behavior of microbes on a QCM chip modified with an artificial siderophore-Fe3+ complex.

    Science.gov (United States)

    Inomata, Tomohiko; Eguchi, Hiroshi; Funahashi, Yasuhiro; Ozawa, Tomohiro; Masuda, Hideki

    2012-01-17

    Three hydroxamate-type artificial siderophores with terminal NH(2) groups, tris[2-{3-(N-acyl-N-hydroxamino)propylamido}propyl]aminomethane (1-3, acyl-R group = Me, Et, and Ph, respectively), and their Fe(3+) complexes, 4-6, were prepared. The stability constant (log β) of 4 was estimated to be about 31 by its EDTA titration. The biological activities of 4-6 for Microbacterium flavescens, which is a hydroxamate-type siderophore, auxotrophic gram-positive microbe, clearly indicated that they permeated the cell membrane depending on their terminal bulky acyl-R groups. These artificial siderophore complexes, 4-6, were modified on Au electrode surfaces with the terminal NH(2) group (4-6/Au). The surface modification of 4-6 was confirmed by several electrochemical measurements. The quartz crystal microbalance (QCM) chips were also modified with 4-6. Microbe adsorption measurements using these modified QCM chips for M. flavescens, Pseudomonas putida, and Eschrichia coli were performed. The QCM chips have the ability to adsorb microbes selectively as a result of the differences in the interactions between the structures of Fe(3+)-artificial siderophore complexes and their receptors or binding proteins within the cell membrane.

  12. The Aspergillus fumigatus siderophore biosynthetic gene sidA, encoding L-ornithine N5-oxygenase, is required for virulence.

    Science.gov (United States)

    Hissen, Anna H T; Wan, Adrian N C; Warwas, Mark L; Pinto, Linda J; Moore, Margo M

    2005-09-01

    Aspergillus fumigatus is the leading cause of invasive mold infection and is a serious problem in immunocompromised populations worldwide. We have previously shown that survival of A. fumigatus in serum may be related to secretion of siderophores. In this study, we identified and characterized the sidA gene of A. fumigatus, which encodes l-ornithine N(5)-oxygenase, the first committed step in hydroxamate siderophore biosynthesis. A. fumigatus sidA codes for a protein of 501 amino acids with significant homology to other fungal l-ornithine N(5)-oxygenases. A stable DeltasidA strain was created by deletion of A. fumigatus sidA. This strain was unable to synthesize the siderophores N',N",N'''-triacetylfusarinine C (TAF) and ferricrocin. Growth of the DeltasidA strain was the same as that of the wild type in rich media; however, the DeltasidA strain was unable to grow in low-iron defined media or media containing 10% human serum unless supplemented with TAF or ferricrocin. No significant differences in ferric reduction activities were observed between the parental strain and the DeltasidA strain, indicating that blocking siderophore secretion did not result in upregulation of this pathway. Unlike the parental strain, the DeltasidA strain was unable to remove iron from human transferrin. A rescued strain (DeltasidA + sidA) was constructed; it produced siderophores and had the same growth as the wild type on iron-limited media. Unlike the wild-type and rescued strains, the DeltasidA strain was avirulent in a mouse model of invasive aspergillosis, indicating that sidA is necessary for A. fumigatus virulence.

  13. Microsatellite diversity of the Nordic type of goats in relation to breed conservation: how relevant is pure ancestry?

    Science.gov (United States)

    Lenstra, J A; Tigchelaar, J; Biebach, I; Hallsson, J H; Kantanen, J; Nielsen, V H; Pompanon, F; Naderi, S; Rezaei, H-R; Saether, N; Ertugrul, O; Grossen, C; Camenisch, G; Vos-Loohuis, M; van Straten, M; de Poel, E A; Windig, J; Oldenbroek, K

    2017-02-01

    In the last decades, several endangered breeds of livestock species have been re-established effectively. However, the successful revival of the Dutch and Danish Landrace goats involved crossing with exotic breeds and the ancestry of the current populations is therefore not clear. We have generated genotypes for 27 FAO-recommended microsatellites of these landraces and three phenotypically similar Nordic-type landraces and compared these breeds with central European, Mediterranean and south-west Asian goats. We found decreasing levels of genetic diversity with increasing distance from the south-west Asian domestication site with a south-east-to-north-west cline that is clearly steeper than the Mediterranean east-to-west cline. In terms of genetic diversity, the Dutch Landrace comes next to the isolated Icelandic breed, which has an extremely low diversity. The Norwegian coastal goat and the Finnish and Icelandic landraces are clearly related. It appears that by a combination of mixed origin and a population bottleneck, the Dutch and Danish Land-races are separated from the other breeds. However, the current Dutch and Danish populations with the multicoloured and long-horned appearance effectively substitute for the original breed, illustrating that for conservation of cultural heritage, the phenotype of a breed is more relevant than pure ancestry and the genetic diversity of the original breed. More in general, we propose that for conservation, the retention of genetic diversity of an original breed and of the visual phenotype by which the breed is recognized and defined needs to be considered separately.

  14. Comparative Genomic Analysis of Delftia tsuruhatensis MTQ3 and the Identification of Functional NRPS Genes for Siderophore Production

    Directory of Open Access Journals (Sweden)

    Haimeng Guo

    2016-01-01

    Full Text Available Plant growth-promoting rhizobacteria (PGPR are a group of rhizosphere bacteria that promote plant growth. Delftia tsuruhatensis MTQ3 is a member of PGPR that produces siderophores. The draft genome sequence of MTQ3 has been reported. Here, we analyzed the genome sequence of MTQ3 and performed a comparative genome analysis of four sequenced Delftia strains, revealing genetic relationships among these strains. In addition, genes responsible for bacteriocin and nonribosomal peptide synthesis were detected in the genomes of each strain. To reveal the functions of NRPS genes in siderophore production in D. tsuruhatensis MTQ3, three NRPS genes were knocked out to obtain the three mutants MTQ3-Δ1941, MTQ3-Δ1945, and MTQ3-Δ1946, which were compared with the wild-type strain. In qualitative and quantitative analyses using CAS assay, the mutants failed to produce siderophores. Accordingly, the NRPS genes in MTQ3 were functionally related to siderophore production. These results clarify one mechanism by which plant growth is promoted in MTQ3 and have important applications in agricultural production.

  15. Discovery of a siderophore export system essential for virulence of Mycobacterium tuberculosis.

    Science.gov (United States)

    Wells, Ryan M; Jones, Christopher M; Xi, Zhaoyong; Speer, Alexander; Danilchanka, Olga; Doornbos, Kathryn S; Sun, Peibei; Wu, Fangming; Tian, Changlin; Niederweis, Michael

    2013-01-01

    Iron is an essential nutrient for most bacterial pathogens, but is restricted by the host immune system. Mycobacterium tuberculosis (Mtb) utilizes two classes of small molecules, mycobactins and carboxymycobactins, to capture iron from the human host. Here, we show that an Mtb mutant lacking the mmpS4 and mmpS5 genes did not grow under low iron conditions. A cytoplasmic iron reporter indicated that the double mutant experienced iron starvation even under high-iron conditions. Loss of mmpS4 and mmpS5 did not change uptake of carboxymycobactin by Mtb. Thin layer chromatography showed that the ΔmmpS4/S5 mutant was strongly impaired in biosynthesis and secretion of siderophores. Pull-down experiments with purified proteins demonstrated that MmpS4 binds to a periplasmic loop of the associated transporter protein MmpL4. This interaction was corroborated by genetic experiments. While MmpS5 interacted only with MmpL5, MmpS4 interacted with both MmpL4 and MmpL5. These results identified MmpS4/MmpL4 and MmpS5/MmpL5 as siderophore export systems in Mtb and revealed that the MmpL proteins transport small molecules other than lipids. MmpS4 and MmpS5 resemble periplasmic adapter proteins of tripartite efflux pumps of Gram-negative bacteria, however, they are not only required for export but also for efficient siderophore synthesis. Membrane association of MbtG suggests a link between siderophore synthesis and transport. The structure of the soluble domain of MmpS4 (residues 52-140) was solved by NMR and indicates that mycobacterial MmpS proteins constitute a novel class of transport accessory proteins. The bacterial burden of the mmpS4/S5 deletion mutant in mouse lungs was lower by 10,000-fold and none of the infected mice died within 180 days compared to wild-type Mtb. This is the strongest attenuation observed so far for Mtb mutants lacking genes involved in iron utilization. In conclusion, this study identified the first components of novel siderophore export systems which

  16. Pyoverdine, the Major Siderophore in Pseudomonas aeruginosa, Evades NGAL Recognition

    Directory of Open Access Journals (Sweden)

    Mary E. Peek

    2012-01-01

    Full Text Available Pseudomonas aeruginosa is the most common pathogen that persists in the cystic fibrosis lungs. Bacteria such as P. aeruginosa secrete siderophores (iron-chelating molecules and the host limits bacterial growth by producing neutrophil-gelatinase-associated lipocalin (NGAL that specifically scavenges bacterial siderophores, therefore preventing bacteria from establishing infection. P. aeruginosa produces a major siderophore known as pyoverdine, found to be important for bacterial virulence and biofilm development. We report that pyoverdine did not bind to NGAL, as measured by tryptophan fluorescence quenching, while enterobactin bound to NGAL effectively causing a strong response. The experimental data indicate that pyoverdine evades NGAL recognition. We then employed a molecular modeling approach to simulate the binding of pyoverdine to human NGAL using NGAL’s published crystal structures. The docking of pyoverdine to NGAL predicted nine different docking positions; however, neither apo- nor ferric forms of pyoverdine docked into the ligand-binding site in the calyx of NGAL where siderophores are known to bind. The molecular modeling results offer structural support that pyoverdine does not bind to NGAL, confirming the results obtained in the tryptophan quenching assay. The data suggest that pyoverdine is a stealth siderophore that evades NGAL recognition allowing P. aeruginosa to establish chronic infections in CF lungs.

  17. New and efficient method using Saccharomyces cerevisiae mutants for identification of siderophores produced by microorganisms.

    Science.gov (United States)

    Park, Yong-Sung; Kim, Ji-Hyun; Chang, Hyo-Ihl; Kim, Seung-Wook; Paik, Hyun-Dong; Kang, Chang-Won; Kim, Tae-Hyoung; Sung, Ha-Chin; Yun, Cheol-Won

    2007-09-01

    The separation and identification of siderophores produced by microorganisms is a time-consuming and an expensive procedure. We have developed a new and efficient method to identify siderophores using well-established Saccharomyces cerevisiae deletion mutants. The Deltafet3,arn strains fail to sustain growth, even when specific siderophores are supplied, and mutants are siderophore-specific: Deltafet3,arn2 for triacetylfusarinine C (TAFC), Deltafet3,arn1,sit1 for ferrichrome (FC), and Deltafet3,sit1 for ferrioxamine B (FOB). The culture broth of Fusarium graminearum was separated by HPLC, and each peak was subjected to a plate assay using S. cerevisiae mutants. We have found that each peak contained specific siderophores produced by F. graminearum, and these coincided with reference siderophores. This method is quite novel because nobody tried this method to identify the siderophores. Furthermore, this method will save time and cost in the identification of siderophores produced by microorganisms.

  18. Siderophores in Cloud Waters and Potential Impact on Atmospheric Chemistry: Production by Microorganisms Isolated at the Puy de Dôme Station.

    Science.gov (United States)

    Vinatier, Virginie; Wirgot, Nolwenn; Joly, Muriel; Sancelme, Martine; Abrantes, Magali; Deguillaume, Laurent; Delort, Anne-Marie

    2016-09-06

    A total of 450 bacteria and yeast strains isolated from cloud waters sampled at the puy de Dôme station in France (1465 m) were screened for their ability to produce siderophores. To achieve this, a high-throughput method in 96-well plates was adapted from the CAS (chrome azurol S) method. Notably, 42% of the isolates were siderophore producers. This production was examined according to the phyla of the tested strains and the type of chelating functional groups (i.e., hydroxamate, catechol, and mixed type). The most active bacteria in the clouds belong to the γ-Proteobacteria class, among which the Pseudomonas genus is the most frequently encountered. γ-Proteobacteria are produced in the majority of mixed function siderophores, such as pyoverdines, which bear a photoactive group. Finally, siderophore production was shown to vary with the origin of the air masses. The organic speciation of iron remains largely unknown in warm clouds. Our results suggest that siderophores could partly chelate Fe(III) in cloud waters and thus potentially impact the chemistry of the atmospheric aqueous phase.

  19. Adsorption of enterobactin to metal oxides and the role of siderophores in bacterial adhesion to metals.

    Science.gov (United States)

    Upritchard, Hamish G; Yang, Jing; Bremer, Philip J; Lamont, Iain L; McQuillan, A James

    2011-09-01

    The potential contribution of chemical bonds formed between bacterial cells and metal surfaces during biofilm initiation has received little attention. Previous work has suggested that bacterial siderophores may play a role in bacterial adhesion to metals. It has now been shown using in situ ATR-IR spectroscopy that enterobactin, a catecholate siderophore secreted by Escherichia coli, forms covalent bonds with particle films of titanium dioxide, boehmite (AlOOH), and chromium oxide-hydroxide which model the surfaces of metals of significance in medical and industrial settings. Adsorption of enterobactin to the metal oxides occurred through the 2,3-dihydroxybenzoyl moieties, with the trilactone macrocycle having little involvement. Vibrational modes of the 2,3-dihydroxybenzoyl moiety of enterobactin, adsorbed to TiO(2), were assigned by comparing the observed IR spectra with those calculated by the density functional method. Comparison of the observed adsorbate IR spectrum with the calculated spectra of catecholate-type [H(2)NCOC(6)H(3)O(2)Ti(OH)(4)](2-) and salicylate-type [H(2)NCOC(6)H(3)O(2)HTi(OH)(4)](2-) surface complexes indicated that the catecholate type is dominant. Analysis of the spectra for enterobactin in solution and that adsorbed to TiO(2) revealed that the amide of the 2,3-dihydroxybenzoylserine group reorientates during coordination to surface Ti(IV) ions. Investigation into the pH dependence of enterobactin adsorption to TiO(2) surfaces showed that all 2,3-dihydroxybenzoyl groups are involved. Infrared absorption bands attributed to adsorbed enterobactin were also strongly evident for E. coli cells attached to TiO(2) particle films. These studies give evidence of enterobactin-metal bond formation and further suggest the generality of siderophore involvement in bacterial biofilm initiation on metal surfaces.

  20. Terpenols as substituents for the diastereoselective formation of enantiomerically pure triple lithium-bridged helicate type-coordination compounds.

    Science.gov (United States)

    Albrecht, M; Isaak, E; Shigemitsu, H; Moha, V; Raabe, G; Fröhlich, R

    2014-10-21

    The terpenols l(-)-borneol, (1S2S3S5R)-3-pinanol, (-)-menthol, and (-)-myrtenol are easily available chiral alcohols for the preparation of enantiomerically pure catechol esters -H2. Those ligands are used for the hierarchical assembly of triple lithium-bridged dinuclear titanium(iv) triscatecholate helicates Li[Li3()6Ti2]. In solution, the dimeric species are in a solvent dependent equilibrium with the monomer Li2[()3Ti]. The equilibrium is studied by (1)H NMR. CD spectroscopy indicates that the configuration at the complex units of the enantiomerically pure dimeric α-chiral derivatives Li[Li3()6Ti2] is opposite to the configuration of the monomers Li2[()3Ti]. For the γ-chiral complex Li2[()3Ti] only a de of 25% is observed and in this case no interpretation of the mechanism of stereocontrol is possible.

  1. The Impact of a Pure Protein Load on the Glucose Levels in Type 1 Diabetes Patients Treated with Insulin Pumps

    Directory of Open Access Journals (Sweden)

    Tomasz Klupa

    2015-01-01

    Full Text Available We aimed to estimate the impact of ingestion of a pure protein load on the glucose levels in T1DM patients treated with insulin pumps. We examined 10 T1DM patients (6 females, mean age—32.3 years, mean HbA1c—6.8% treated with insulin pumps equipped with a continuous glucose monitoring system (CGMS. In Phase I, baseline insulin infusion was optimized to minimize the differences in fasting glucose levels to less than 30 mg/dL between any two time points between 9 a.m. and 3 p.m. In Phase II, the patients were exposed to single pure protein load. CGMS record was performed and the glucose pattern was defined for 6 hours of each phase. The maximal glucose level increment was similar for the entire duration of the fasting and the protein load test (26.6 versus 27.6 mg/dL, resp., P<0.78. There was only a borderline difference in change between baseline versus 6th hour glucose (12.5 and 19.0 mg/dL, P=0.04. Glucose variability, assessed by standard deviation of mean glucose levels, was 36.4 and 37.9 mg/dL, respectively (P=0.01. The administration of a pure protein load does not seem to have a clinically significant impact on glucose levels in T1DM patients treated with insulin pumps.

  2. The impact of a pure protein load on the glucose levels in type 1 diabetes patients treated with insulin pumps.

    Science.gov (United States)

    Klupa, Tomasz; Benbenek-Klupa, Teresa; Matejko, Bartlomiej; Mrozinska, Sandra; Malecki, Maciej T

    2015-01-01

    We aimed to estimate the impact of ingestion of a pure protein load on the glucose levels in T1DM patients treated with insulin pumps. We examined 10 T1DM patients (6 females, mean age-32.3 years, mean HbA1c-6.8%) treated with insulin pumps equipped with a continuous glucose monitoring system (CGMS). In Phase I, baseline insulin infusion was optimized to minimize the differences in fasting glucose levels to less than 30 mg/dL between any two time points between 9 a.m. and 3 p.m. In Phase II, the patients were exposed to single pure protein load. CGMS record was performed and the glucose pattern was defined for 6 hours of each phase. The maximal glucose level increment was similar for the entire duration of the fasting and the protein load test (26.6 versus 27.6 mg/dL, resp., P < 0.78). There was only a borderline difference in change between baseline versus 6th hour glucose (12.5 and 19.0 mg/dL, P = 0.04). Glucose variability, assessed by standard deviation of mean glucose levels, was 36.4 and 37.9 mg/dL, respectively (P = 0.01). The administration of a pure protein load does not seem to have a clinically significant impact on glucose levels in T1DM patients treated with insulin pumps.

  3. The Impact of a Pure Protein Load on the Glucose Levels in Type 1 Diabetes Patients Treated with Insulin Pumps

    Science.gov (United States)

    Klupa, Tomasz; Benbenek-Klupa, Teresa; Matejko, Bartlomiej; Mrozinska, Sandra; Malecki, Maciej T.

    2015-01-01

    We aimed to estimate the impact of ingestion of a pure protein load on the glucose levels in T1DM patients treated with insulin pumps. We examined 10 T1DM patients (6 females, mean age—32.3 years, mean HbA1c—6.8%) treated with insulin pumps equipped with a continuous glucose monitoring system (CGMS). In Phase I, baseline insulin infusion was optimized to minimize the differences in fasting glucose levels to less than 30 mg/dL between any two time points between 9 a.m. and 3 p.m. In Phase II, the patients were exposed to single pure protein load. CGMS record was performed and the glucose pattern was defined for 6 hours of each phase. The maximal glucose level increment was similar for the entire duration of the fasting and the protein load test (26.6 versus 27.6 mg/dL, resp., P < 0.78). There was only a borderline difference in change between baseline versus 6th hour glucose (12.5 and 19.0 mg/dL, P = 0.04). Glucose variability, assessed by standard deviation of mean glucose levels, was 36.4 and 37.9 mg/dL, respectively (P = 0.01). The administration of a pure protein load does not seem to have a clinically significant impact on glucose levels in T1DM patients treated with insulin pumps. PMID:25767510

  4. Role of Siderophores in Dissimilatory Iron Reduction in Arctic Soils : Effect of Direct Amendment of Siderophores to Arctic Soil

    Science.gov (United States)

    Srinivas, A. J.; Dinsdale, E. A.; Lipson, D.

    2014-12-01

    Dissimilatory iron reduction (DIR), where ferric iron (Fe3+) is reduced to ferrous iron (Fe2+) anaerobically, is an important respiratory pathway used by soil bacteria. DIR contributes to carbon dioxide (CO2) efflux from the wet sedge tundra biome in the Arctic Coastal Plain (ACP) in Alaska, and could competitively inhibit the production of methane, a stronger greenhouse gas than CO2, from arctic soils. The occurrence of DIR as a dominant anaerobic process depends on the availability of substantial levels of Fe3+ in soils. Siderophores are metabolites made by microbes to dissolve Fe3+ from soil minerals in iron deficient systems, making Fe3+ soluble for micronutrient uptake. However, as the ACP is not iron deficient, siderophores in arctic soils may play a vital role in anaerobic respiration by dissolving Fe3+ for DIR. We studied the effects of direct siderophore addition to arctic soils through a field study conducted in Barrow, Alaska, and a laboratory incubation study conducted at San Diego State University. In the field experiment, 50μM deferroxamine mesylate (a siderophore), 50μM trisodium nitrilotriacetate (an organic chelator) or an equal volume of water was added to isolated experimental plots, replicated in clusters across the landscape. Fe2+ concentrations were measured in soil pore water samples collected periodically to measure DIR over time in each. In the laboratory experiment, frozen soil samples obtained from drained thaw lake basins in the ACP, were cut into cores and treated with the above-mentioned compounds to the same final concentrations. Along with measuring Fe2+ concentrations, CO2 output was also measured to monitor DIR over time in each core. Experimental addition of siderophores to soils in both the field and laboratory resulted in increased concentrations of soluble Fe3+ and a sustained increase in Fe2+concentrations over time, along with increased respiration rates in siderophore-amended cores. These results show increased DIR in

  5. The Legionella pneumophila Siderophore Legiobactin Is a Polycarboxylate That Is Identical in Structure to Rhizoferrin.

    Science.gov (United States)

    Burnside, Denise M; Wu, Yuyang; Shafaie, Saman; Cianciotto, Nicholas P

    2015-10-01

    Legionella pneumophila, the agent of Legionnaires' disease, secretes a siderophore (legiobactin) that promotes bacterial infection of the lung. In past work, we determined that cytoplasmic LbtA (from Legiobactin gene A) promotes synthesis of legiobactin, inner membrane LbtB aids in export of the siderophore, and outer membrane LbtU and inner membrane LbtC help mediate ferrilegiobactin uptake and assimilation. However, the past studies examined legiobactin contained within bacterial culture supernatants. By utilizing high-pressure liquid chromatography that incorporates hydrophilic interaction-based chemistry, we have now purified legiobactin from supernatants of virulent strain 130b that is suitable for detailed chemical analysis. High-resolution mass spectrometry (MS) revealed that the molecular mass of (protonated) legiobactin is 437.140 Da. On the basis of the results obtained from both MS analysis and various forms of nuclear magnetic resonance, we found that legiobactin is composed of two citric acid residues linked by a putrescine bridge and thus is identical in structure to rhizoferrin, a polycarboxylate-type siderophore made by many fungi and several unrelated bacteria. Both purified legiobactin and rhizoferrin obtained from the fungus Cunninghamella elegans were able to promote Fe(3+) uptake by wild-type L. pneumophila as well as enhance growth of iron-starved bacteria. These results did not occur with 130b mutants lacking lbtU or lbtC, indicating that both endogenously made legiobactin and exogenously derived rhizoferrin are assimilated by L. pneumophila in an LbtU- and LbtC-dependent manner.

  6. The Impact of a Pure Protein Load on the Glucose Levels in Type 1 Diabetes Patients Treated with Insulin Pumps

    OpenAIRE

    Tomasz Klupa; Teresa Benbenek-Klupa; Bartlomiej Matejko; Sandra Mrozinska; Malecki, Maciej T.

    2015-01-01

    We aimed to estimate the impact of ingestion of a pure protein load on the glucose levels in T1DM patients treated with insulin pumps. We examined 10 T1DM patients (6 females, mean age—32.3 years, mean HbA1c—6.8%) treated with insulin pumps equipped with a continuous glucose monitoring system (CGMS). In Phase I, baseline insulin infusion was optimized to minimize the differences in fasting glucose levels to less than 30 mg/dL between any two time points between 9 a.m. and 3 p.m. In Phase II, ...

  7. Biofilm and siderophore effects on secondary waste water disinfection.

    Science.gov (United States)

    Saidi, N; Kouki, S; Mehri, I; Ben Rejeb, A; Belila, A; Hassen, A; Ouzari, H

    2011-10-01

    The efficiency of ultraviolet (UV) light disinfection of wastewater effluent using a large-scale pilot system was studied. The relationship between biofilm and siderophore production and UV doses received by Pseudomonas aeruginosa strain ATCC 15442 was determined. UV decreased pyoverdine production and enhanced biofilm production. Consequently external factors conditioned by both pyoverdine and biofilm may affect the UV effect on bacterial disinfection.

  8. Isolation and Characterization of Three Siderophores from Marine Bacteria

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    One new siderophore (3) along with the previously reported nocardamine (1) and schizokinen A (2) were iso-lated from the culture broth of three bacteria isolated from unidentified marine sponges. The minimal active con-centrations of the compounds by chrome azurol S (CAS) liquid assay are 5, 4 and 156 μg/mL, respectively.

  9. Siderophore production by mycorrhizal sorghum roots under micronutrient deficient condition

    Directory of Open Access Journals (Sweden)

    N. Aliasgharzad

    2009-05-01

    Full Text Available It has widely been accepted that mycorrhizal symbiosis improves micronutrients uptake by most of the plants. In this study, sorghum (Sorghum bicolor L. plants were grown in sterile perlite and were inoculated with either Glomus etunicatum (GE or G.intraradices (GI, while the control set was left un-inoculated. Rorison's nutrient solution with three levels of 0, half and full strength (C0, C0.5 and C1, respectively of Fe, Cu, Zn and Mn was applied to the pots during 85 days of growth period. Chrome azurol-S assay was used for determination of siderophores in root leachates on 45, 65 and 85 days after sowing (DAS. Siderophore production per unit volume of root was higher in mycorrhizal than non-mycorrhizal plants. Both GE and GI were efficient fungi in this respect. Siderophore production was significantly induced at C0 level of the micronutrients. Amount of siderophores produced on 45 and 85 DAS was more than 65 DAS. Mycorrhizal root colonization by GE or GI was not significantly affected by micronutrient levels.

  10. Pseudochelin A, a siderophore of Pseudoalteromonas piscicida S2040

    DEFF Research Database (Denmark)

    Sonnenschein, Eva; Stierhof, Marc; Goralczyk, Stephan

    2017-01-01

    A new siderophore containing a 4,5-dihydroimidazole moiety was isolated from Pseudoalteromonas piscicida S2040 together with myxochelins A and B, alteramide A and its cycloaddition product, and bromo- and dibromoalterochromides. The structure of pseudochelin A was established by spectroscopic tec...

  11. Purification and structural characterization of siderophore (corynebactin) from Corynebacterium diphtheriae.

    Science.gov (United States)

    Zajdowicz, Sheryl; Haller, Jon C; Krafft, Amy E; Hunsucker, Steve W; Mant, Colin T; Duncan, Mark W; Hodges, Robert S; Jones, David N M; Holmes, Randall K

    2012-01-01

    During infection, Corynebacterium diphtheriae must compete with host iron-sequestering mechanisms for iron. C. diphtheriae can acquire iron by a siderophore-dependent iron-uptake pathway, by uptake and degradation of heme, or both. Previous studies showed that production of siderophore (corynebactin) by C. diphtheriae is repressed under high-iron growth conditions by the iron-activated diphtheria toxin repressor (DtxR) and that partially purified corynebactin fails to react in chemical assays for catecholate or hydroxamate compounds. In this study, we purified corynebactin from supernatants of low-iron cultures of the siderophore-overproducing, DtxR-negative mutant strain C. diphtheriae C7(β) ΔdtxR by sequential anion-exchange chromatography on AG1-X2 and Source 15Q resins, followed by reverse-phase high-performance liquid chromatography (RP-HPLC) on Zorbax C8 resin. The Chrome Azurol S (CAS) chemical assay for siderophores was used to detect and measure corynebactin during purification, and the biological activity of purified corynebactin was shown by its ability to promote growth and iron uptake in siderophore-deficient mutant strains of C. diphtheriae under iron-limiting conditions. Mass spectrometry and NMR analysis demonstrated that corynebactin has a novel structure, consisting of a central lysine residue linked through its α- and ε- amino groups by amide bonds to the terminal carboxyl groups of two different citrate residues. Corynebactin from C. diphtheriae is structurally related to staphyloferrin A from Staphylococcus aureus and rhizoferrin from Rhizopus microsporus in which d-ornithine or 1,4-diaminobutane, respectively, replaces the central lysine residue that is present in corynebactin.

  12. Purification and structural characterization of siderophore (corynebactin from Corynebacterium diphtheriae.

    Directory of Open Access Journals (Sweden)

    Sheryl Zajdowicz

    Full Text Available During infection, Corynebacterium diphtheriae must compete with host iron-sequestering mechanisms for iron. C. diphtheriae can acquire iron by a siderophore-dependent iron-uptake pathway, by uptake and degradation of heme, or both. Previous studies showed that production of siderophore (corynebactin by C. diphtheriae is repressed under high-iron growth conditions by the iron-activated diphtheria toxin repressor (DtxR and that partially purified corynebactin fails to react in chemical assays for catecholate or hydroxamate compounds. In this study, we purified corynebactin from supernatants of low-iron cultures of the siderophore-overproducing, DtxR-negative mutant strain C. diphtheriae C7(β ΔdtxR by sequential anion-exchange chromatography on AG1-X2 and Source 15Q resins, followed by reverse-phase high-performance liquid chromatography (RP-HPLC on Zorbax C8 resin. The Chrome Azurol S (CAS chemical assay for siderophores was used to detect and measure corynebactin during purification, and the biological activity of purified corynebactin was shown by its ability to promote growth and iron uptake in siderophore-deficient mutant strains of C. diphtheriae under iron-limiting conditions. Mass spectrometry and NMR analysis demonstrated that corynebactin has a novel structure, consisting of a central lysine residue linked through its α- and ε- amino groups by amide bonds to the terminal carboxyl groups of two different citrate residues. Corynebactin from C. diphtheriae is structurally related to staphyloferrin A from Staphylococcus aureus and rhizoferrin from Rhizopus microsporus in which d-ornithine or 1,4-diaminobutane, respectively, replaces the central lysine residue that is present in corynebactin.

  13. Inhibition of the Flavin-Dependent Monooxygenase Siderophore A (SidA) Blocks Siderophore Biosynthesis and Aspergillus fumigatus Growth.

    Science.gov (United States)

    Martín Del Campo, Julia S; Vogelaar, Nancy; Tolani, Karishma; Kizjakina, Karina; Harich, Kim; Sobrado, Pablo

    2016-11-18

    Aspergillus fumigatus is an opportunistic fungal pathogen and the most common causative agent of fatal invasive mycoses. The flavin-dependent monooxygenase siderophore A (SidA) catalyzes the oxygen and NADPH dependent hydroxylation of l-ornithine (l-Orn) to N(5)-l-hydroxyornithine in the biosynthetic pathway of hydroxamate-containing siderophores in A. fumigatus. Deletion of the gene that codes for SidA has shown that it is essential in establishing infection in mice models. Here, a fluorescence polarization high-throughput assay was used to screen a 2320 compound library for inhibitors of SidA. Celastrol, a natural quinone methide, was identified as a noncompetitive inhibitor of SidA with a MIC value of 2 μM. Docking experiments suggest that celastrol binds across the NADPH and l-Orn pocket. Celastrol prevents A. fumigatus growth in blood agar. The addition of purified ferric-siderophore abolished the inhibitory effect of celastrol. Thus, celastrol inhibits A. fumigatus growth by blocking siderophore biosynthesis through SidA inhibiton.

  14. An update on iron acquisition by Legionella pneumophila: new pathways for siderophore uptake and ferric iron reduction.

    Science.gov (United States)

    Cianciotto, Nicholas P

    2015-01-01

    Iron acquisition is critical for the growth and pathogenesis of Legionella pneumophila, the causative agent of Legionnaires' disease. L. pneumophila utilizes two main modes of iron assimilation, namely ferrous iron uptake via the FeoB system and ferric iron acquisition through the action of the siderophore legiobactin. This review highlights recent studies concerning the mechanism of legiobactin assimilation, the impact of c-type cytochromes on siderophore production, the importance of legiobactin in lung infection and a newfound role for a bacterial pyomelanin in iron acquisition. These data demonstrate that key aspects of L. pneumophila iron acquisition are significantly distinct from those of long-studied, 'model' organisms. Indeed, L. pneumophila may represent a new paradigm for a variety of other intracellular parasites, pathogens and under-studied bacteria.

  15. Effect of salmon type and presence/absence of bone on color, sensory characteristics, and consumer acceptability of pureed and chunked infant food products.

    Science.gov (United States)

    DeSantos, F A; Ramamoorthi, L; Bechtel, P; Smiley, S; Brewer, M S

    2010-08-01

    Salmon-based infant food (puree) and toddler food (puree plus chunks) were manufactured from pink salmon, with and without bone, and from Sockeye salmon, with and without bone, to contain 45% salmon, 55% water, and 5% starch. Products were retort processed at 118 to 121 degrees C for 55 min in a steam-jacketed still retort. A trained descriptive panel (n = 7) evaluated infant and toddler foods separately. Instrumental color, pH, and water activity were also determined. Infant and toddler foods were also evaluated by a consumer panel (n = 104) of parents for product acceptability. During the manufacturing process (cooking, homogenization, retort processing), salmon infant food from pink salmon lost much of its characteristic pink color while that from sockeye salmon retained a greater amount. Bitterness was more evident in samples with bones. In the toddler food formulation containing chunks, the odor and flavor characteristics were influenced primarily by the type of salmon. The presence of bone affected visual pink color and lightness, and salmon odor only. Consumers scored products made with sockeye salmon as more acceptable despite the fact that they had more off-flavor than products from pink salmon. The appearance and thickness of the pureed infant food was more acceptable than the toddler food with chunks despite the chunky toddler product having more acceptable salmon flavor. This indicates that the color and appearance of the prototypes were the main drivers for liking. Of the total number of parents surveyed, 73% would feed this salmon product to their children.

  16. Pure red cell aplasia accompanied by autoimmune hemolytic anemia in a patient with type A viral hepatitis.

    Science.gov (United States)

    Koiso, Hiromi; Kobayashi, Satsuki; Ueki, Kazue; Hamada, Tetsuya; Tsukamoto, Norifumi; Karasawa, Masamitsu; Murakami, Hirokazu; Nojima, Yoshihisa

    2009-05-01

    A rare case of acute hepatitis A associated with autoimmune hemolytic anemia (AIHA) and pure red cell aplasia (PRCA) is reported. A 55-year-old woman consulted a doctor because of common cold-like symptoms and she was referred to our hospital in January 2007. Laboratory findings showed a marked elevation of serum transaminase and total bilirubin levels (AST 9,605 IU/l, ALT 5,546 IU/l and T-bil 4.14 mg/dl), and prolonged prothrombin time, findings which suggested the risk of progression to fulminant hepatitis, and she was treated with plasmapheresis and hemodialysis filtration on the first and second hospital days. She was diagnosed with severe acute hepatitis A based on the elevation of serum IgM anti-hepatitis A virus. On the 20th hospital day, her hemoglobin level began to decrease in spite of improving transaminase levels without any signs of gastrointestinal bleeding. Bilirubin and LDH elevation, haptoglobin decline and a positive direct Coombs test were detected and these findings indicated AIHA complication; however, the reticulocyte count decreased and bone marrow showed marked erythroid hypoplasia so the co-existence of PRCA was diagnosed. After oral prednisolone administration (1 mg/kg/day), her hemolytic anemia rapidly improved.

  17. Preparation of artificial canine femoral stem with HA-Ti ladder-type coating on plasma-sprayed pure Ti substrate and its performance evaluation

    Energy Technology Data Exchange (ETDEWEB)

    Zeng Xianlin, E-mail: zxlxhh@163.com [Department of Orthopedics, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022 (China); Li Jingfeng; Yang Shuhua; Zheng Qixin; Zou Zhenwei [Department of Orthopedics, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022 (China)

    2012-03-01

    An ideal, biological-type, artificial femoral stem prosthesis has good stability and improved bone-prosthesis bonding capacity. In the current study, pure hydroxyapatite (HA)-coated, cementless, artificial femoral stems were prepared by adopting different plasma spray powers and distances and were tested in terms of shear strength. The pure titanium (Ti) substrates, HA coatings, and composite Ti-HA ladder-type coatings prepared under vacuum and atmospheric conditions were examined to compare the shear strengths, microscopic constitutions, and structures of the coatings. The coating was fabricated and the bond strength was improved by adopting 35 kW of spray power and an 80 mm spray distance. The comparisons show that the shear strength of the Ti coating prepared under vacuum conditions was higher than that of the coating prepared under atmospheric conditions (P < 0.05). Moreover, the pressure-shear strength of the Ti + HAG + Ti + V group coating was statistically significantly different from those of the HA + Ti + V and HA + Ti + A groups (P < 0.05). The coatings were compared using scanning electron microscopy, X-ray diffraction, and infrared spectrum analysis. The composite HA-Ti ladder-type coating group, where pure Ti substrate was sprayed onto the Ti alloy under vacuum conditions, had a successive laminate structure. In addition, the intergranular bond in the HA surface layer on the gradient coating was compact and highly crystallized. Under vacuum conditions, the plasma-sprayed layer was characterized by higher tightness, moderate porosity, higher bonding strength to HA, and higher HA crystallinity. The proposed coating can be used in new, cementless, artificial femoral stems with improved bone-prosthesis bonding capacity and stability.

  18. Radioactive and stable metal bioaccumulation, crystalline compound and siderophore detection in Clavariadelphus truncatus

    Energy Technology Data Exchange (ETDEWEB)

    Gaso, M.I. [ININ, Ap. Post. 18-1027, C.P. 11801, Mexico D.F. (Mexico)], E-mail: migp@nuclear.inin.mx; Segovia, N. [Instituto de Geofisica, UNAM, Ciudad Universitaria, 04510 Mexico, D.F. (Mexico)], E-mail: nurina@terra.com.mx; Morton, O. [Instituto de Geofisica, UNAM, Ciudad Universitaria, 04510 Mexico, D.F. (Mexico)], E-mail: omorton@geofisica.unam.mx; Lopez, J.L. [Instituto de Geografia, UNAM, Ciudad Universitaria, 04510 Mexico, D.F. (Mexico)], E-mail: jlc@servidor.unam.mx; Machuca, A. [Departmento Forestal, Universidad de Concepcion, Los Angeles (Chile)], E-mail: angmachu@udec.cl; Hernandez, E. [Instituto de Geofisica, UNAM, Ciudad Universitaria, 04510 Mexico, D.F. (Mexico)], E-mail: aeliza@geofisica.unam.mx

    2007-09-15

    {sup 137}Cs and {sup 40}K activity concentrations and stable elements have been measured in Clavariadelphus truncatus collected in Mexico. Iron-chelating compounds of siderophore-type was also studied in the species. {sup 137}Cs and {sup 40}K were determined in soil and mushroom samples with HpGe gamma-ray spectrometry. Macro- and micro-elemental concentrations were determined by XRF and ICP-MS. Siderophore detection was obtained with a colorimetric assay and X-ray diffraction analysis was performed using a Siemens D5000 diffractometer. {sup 137}Cs geometric mean concentration in C. truncatus was 26 times higher as compared with other Mexican edible mushroom species, while {sup 40}K showed stability. Soil-C. truncatus concentration ratio for {sup 137}Cs and other micro-elements such as Cs, Rb and Pb were also higher than other Mexican edible species. The {sup 137}Cs committed effective dose due to the ingestion of C. truncatus was 8 x 10{sup -6} Sv year{sup -1}. The main crystalline structure found in C. truncatus was D-Mannitol.

  19. Unambiguous identification and discovery of bacterial siderophores by direct injection 21 Tesla Fourier transform ion cyclotron resonance mass spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Walker, Lawrence R.; Tfaily, Malak M.; Shaw, Jared B.; Hess, Nancy J.; Pasa Tolic, Ljiljana; Koppenaal, David W.

    2017-01-01

    Under iron-limiting conditions, bacteria produce low molecular mass Fe(III) binding molecules known as siderophores to sequester the Fe(III), along with other elements, increasing their bioavailibility. Siderophores are thought to influence iron cycling and biogeochemistry in both marine and terrestrial ecosystems and hence the need for rapid, confident characterization of these compounds has increased. In this study, the type of siderophores produced by two marine bacterial species, Synechococcus sp. PCC 7002 and Vibrio cyclitrophicus 1F53, were characterized using a newly developed 21T Fourier Transform Ion Cyclotron Resonance Mass Spectrometer (FTICR MS) with direct injection electrospray ionization. This technique allowed for the rapid detection of synechobactins from Synechococcus sp. PCC 7002 as well as amphibactins from Vibrio cyclitrophicus 1F53 based on high mass accuracy and resolution allowing for observation of specific Fe isotopic peaks and fine isotopic structure enables highly confident identification of these sideropohores. When combined with molecular network analysis two new amphibactins were discovered and verified by tandem MS. These results show that high-field FTICR MS is a powerful technique that will greatly improve the ability to rapidly identify and discover metal binding species in the environment.

  20. Siderocalin outwits the coordination chemistry of vibriobactin, a siderophore of Vibrio cholerae.

    Science.gov (United States)

    Allred, Benjamin E; Correnti, Colin; Clifton, Matthew C; Strong, Roland K; Raymond, Kenneth N

    2013-09-20

    The human protein siderocalin (Scn) inhibits bacterial iron acquisition by binding catechol siderophores. Several pathogenic bacteria respond by making stealth siderophores that are not recognized by Scn. Fluvibactin and vibriobactin, respectively of Vibrio fluvialis and Vibrio cholerae , include an oxazoline adjacent to a catechol. This chelating unit binds iron either in a catecholate or a phenolate-oxazoline coordination mode. The latter has been suggested to make vibriobactin a stealth siderophore without directly identifying the coordination mode in relation to Scn binding. We use Scn binding assays with the two siderophores and two oxazoline-substituted analogs and the crystal structure of Fe-fluvibactin:Scn to show that the oxazoline does not prevent Scn binding; hence, vibriobactin is not a stealth siderophore. We show that the phenolate-oxazoline coordination mode is present at physiological pH and is not bound by Scn. However, Scn binding shifts the coordination to the catecholate mode and thereby inactivates this siderophore.

  1. Nigribactin, a Novel Siderophore from Vibrio nigripulchritudo, Modulates Staphylococcus aureus Virulence Gene Expression

    DEFF Research Database (Denmark)

    Nielsen, Anita; Månsson, Maria; Wietz, Matthias

    2012-01-01

    3 expedition, a strain collection was established comprising bacteria that express antimicrobial activity against Vibrio anguillarum and/or Staphylococcus aureus. Within this collection we searched colony material, culture supernatants, and cell extracts for virulence modulating activity showing......) was a Vibrio nigripulchritudo. Extraction, purification and structural elucidation revealed a novel siderophore, designated nigribactin, which induces spa transcription. The effect of nigribactin on spa expression is likely to be independent from its siderophore activity, as another potent siderophore...

  2. Burkholderia cepacia XXVI siderophore with biocontrol capacity against Colletotrichum gloeosporioides.

    Science.gov (United States)

    de Los Santos-Villalobos, Sergio; Barrera-Galicia, Guadalupe Coyolxauhqui; Miranda-Salcedo, Mario Alberto; Peña-Cabriales, Juan José

    2012-08-01

    Colletotrichum gloeosporioides is the causal agent of anthracnose in mango. Burkholderia cepacia XXVI, isolated from mango rhizosphere and identified by 16S rDNA sequencing as a member of B. cepacia complex, was more effective than 6 other mango rhizosphere bacteria in inhibiting the model mango pathogen, C. gloeosporioides ATCC MYA 456. Biocontrol of this pathogen was demonstrated on Petri-dishes containing PDA by > 90 % reduction of surface colonization. The nature of the biocontrol metabolite(s) was characterized via a variety of tests. The inhibition was almost exclusively due to production of agar-diffusible, not volatile, metabolite(s). The diffusible metabolite(s) underwent thermal degradation at 70 and 121 °C (1 atm). Tests for indole acetic acid production and lytic enzyme activities (cellulase, glucanase and chitinase) by B. cepacia XXVI were negative, indicating that these metabolites were not involved in the biocontrol effect. Based on halo formation and growth inhibition of the pathogen on the diagnostic medium, CAS-agar, as well as colorimetric tests we surmised that strain XXVI produced a hydroxamate siderophore involved in the biocontrol effect observed. The minimal inhibitory concentration test showed that 0.64 μg ml(-1) of siderophore (Deferoxamine mesylate salt-equivalent) was sufficient to achieve 91.1 % inhibition of the pathogen growth on Petri-dishes containing PDA. The biocontrol capacity against C. gloeosporioides ATCC MYA 456 correlated directly with the siderophore production by B. cepacia XXVI: the highest concentration of siderophore production in PDB on day 7, 1.7 μg ml(-1) (Deferoxamine mesylate salt-equivalent), promoted a pathogen growth inhibition of 94.9 %. The growth of 5 additional strains of C. gloeosporioides (isolated from mango "Ataulfo" orchards located in the municipality of Chahuites, State of Oaxaca in Mexico) was also inhibited when confronted with B. cepacia XXVI. Results indicate that B. cepacia XXVI or its

  3. Unsaturated macrocyclic dihydroxamic acid siderophores produced by Shewanella putrefaciens using precursor-directed biosynthesis.

    Science.gov (United States)

    Soe, Cho Z; Codd, Rachel

    2014-04-18

    To acquire iron essential for growth, the bacterium Shewanella putrefaciens produces the macrocyclic dihydroxamic acid putrebactin (pbH2; [M + H(+)](+), m/zcalc 373.2) as its native siderophore. The assembly of pbH2 requires endogenous 1,4-diaminobutane (DB), which is produced from the ornithine decarboxylase (ODC)-catalyzed decarboxylation of l-ornithine. In this work, levels of endogenous DB were attenuated in S. putrefaciens cultures by augmenting the medium with the ODC inhibitor 1,4-diamino-2-butanone (DBO). The presence in the medium of DBO together with alternative exogenous non-native diamine substrates, (15)N2-1,4-diaminobutane ((15)N2-DB) or 1,4-diamino-2(E)-butene (E-DBE), resulted in the respective biosynthesis of (15)N-labeled pbH2 ((15)N4-pbH2; [M + H(+)](+), m/zcalc 377.2, m/zobs 377.2) or the unsaturated pbH2 variant, named here: E,E-putrebactene (E,E-pbeH2; [M + H(+)](+), m/zcalc 369.2, m/zobs 369.2). In the latter system, remaining endogenous DB resulted in the parallel biosynthesis of the monounsaturated DB-E-DBE hybrid, E-putrebactene (E-pbxH2; [M + H(+)](+), m/zcalc 371.2, m/zobs 371.2). These are the first identified unsaturated macrocyclic dihydroxamic acid siderophores. LC-MS measurements showed 1:1 complexes formed between Fe(III) and pbH2 ([Fe(pb)](+); [M](+), m/zcalc 426.1, m/zobs 426.2), (15)N4-pbH2 ([Fe((15)N4-pb)](+); [M](+), m/zcalc 430.1, m/zobs 430.1), E,E-pbeH2 ([Fe(E,E-pbe)](+); [M](+), m/zcalc 422.1, m/zobs 422.0), or E-pbxH2 ([Fe(E-pbx)](+); [M](+), m/zcalc 424.1, m/zobs 424.2). The order of the gain in siderophore-mediated Fe(III) solubility, as defined by the difference in retention time between the free ligand and the Fe(III)-loaded complex, was pbH2 (ΔtR = 8.77 min) > E-pbxH2 (ΔtR = 6.95 min) > E,E-pbeH2 (ΔtR = 6.16 min), which suggests one possible reason why nature has selected for saturated rather than unsaturated siderophores as Fe(III) solubilization agents. The potential to conduct multiple types of ex situ chemical

  4. Optical and spectral studies on pure and europium doped olgite type Na(Sr,Ba)PO4 ceramics.

    Science.gov (United States)

    Jawaher, K Rackesh; Jagannathan, R; Das, S Jerome; Krishnan, S

    2015-04-05

    Europium ion doped olgite type Na(Sr,Ba)PO4 ceramics, a new generation of light emitting bulb, was prepared by a high temperature solid-state reaction method. The synthesized materials were subjected to various characterizations such as X-ray powder diffraction, Scanning electron microscopy and FT-IR spectra measurements. The EPR spectrum of the sample exhibits a well-resolved hyperfine structure of 151Eu2+ and 153Eu2+ isotopes and the g value has been calculated. Fluorescence spectra revealed that europium ions were present in divalent as well as in the trivalent oxidation states. The critical distance for energy transfer between Eu2+ and Eu2+ ion is calculated as 20Å, which is in good agreement with that of experimental data. The FTIR analysis reveals all the vibrations of PO4(3-) ions.

  5. Intergranular stress corrosion cracking of type 304 stainless steels treated with inhibitive chemicals in high temperature pure water

    Energy Technology Data Exchange (ETDEWEB)

    Yeh, T.K. [Nuclear Science and Technology Development Center, National Tsing-Hua Univ. Taiwan (China); Lee, M.Y.; Tsai, C.H. [Department of Engineering and System Science, National Tsing-Hua Univ. Taiwan (China)

    2002-07-01

    Electrochemical potentiodynamic polarizations, electrochemical corrosion potential (ECP) measurements and slow strain rate tensile (SSRT) tests were conducted to investigate the intergranular stress corrosion cracking (IGSCC) characteristics of Type 304 stainless steels treated with inhibitive chemicals in simulated boiling water reactor (BWR) environments. A number of thermally sensitized specimens were prepared and were pre-oxidized in a 288 C environment with the presence of 300 ppb dissolved oxygen for 360 hours. Most of the specimens were then treated with various chemicals including powdered zirconium oxide (ZrO{sub 2}), powdered titanium oxide (TiO{sub 2}), and zirconyl nitrate [ZrO(NO{sub 3}){sub 2}] via static immersion at 90 C, 150 C, and 200 C. Test environments were specifically designed in a circulation loop to create a dissolved oxygen concentration of 300 ppb. Test results showed that the corrosion current densities of all treated specimens were lower than that of the untreated, pre-oxidized specimen at ambient temperature in a solution mixed with 1 mM K{sub 3}Fe(CN){sub 6} and 1 mM K{sub 4}Fe(CN){sub 6}. The ECPs of the treated specimens could be lower or higher than that of the pre-oxidized one at 288 C, depending upon the type of treating chemical and the treating temperature. In addition, IGSCC was observed on all specimens (treated or untreated) in the same environment. However, the untreated specimen exhibited lower elongation, shorter failure time, and more secondary cracks on the side surfaces. It was therefore suggested that inhibitive chemicals such as ZrO{sub 2}, TiO{sub 2}, and ZrO(NO{sub 3}){sub 2} did provide a certain degree of enhancement in improving the mechanical behavior of the treated specimens and in prolonging the IGSCC initiation time. (authors)

  6. Biotrophy-specific downregulation of siderophore biosynthesis in Colletotrichum graminicola is required for modulation of immune responses of maize.

    Science.gov (United States)

    Albarouki, Emad; Schafferer, Lukas; Ye, Fanghua; von Wirén, Nicolaus; Haas, Hubertus; Deising, Holger B

    2014-04-01

    The hemibiotrophic maize pathogen Colletotrichum graminicola synthesizes one intracellular and three secreted siderophores. eGFP fusions with the key siderophore biosynthesis gene, SID1, encoding l-ornithine-N(5) -monooxygenase, suggested that siderophore biosynthesis is rigorously downregulated specifically during biotrophic development. In order to investigate the role of siderophores during vegetative development and pathogenesis, SID1, which is required for synthesis of all siderophores, and the non-ribosomal peptide synthetase gene NPS6, synthesizing secreted siderophores, were deleted. Mutant analyses revealed that siderophores are required for vegetative growth under iron-limiting conditions, conidiation, ROS tolerance, and cell wall integrity. Δsid1 and Δnps6 mutants were hampered in formation of melanized appressoria and impaired in virulence. In agreement with biotrophy-specific downregulation of siderophore biosynthesis, Δsid1 and Δnps6 strains were not affected in biotrophic development, but spread of necrotrophic hyphae was reduced. To address the question why siderophore biosynthesis is specifically downregulated in biotrophic hyphae, maize leaves were infiltrated with siderophores. Siderophore infiltration alone did not induce defence responses, but formation of biotrophic hyphae in siderophore-infiltrated leaves caused dramatically increased ROS formation and transcriptional activation of genes encoding defence-related peroxidases and PR proteins. These data suggest that fungal siderophores modulate the plant immune system. © 2014 The Authors. Molecular Microbiology published by John Wiley & Sons Ltd.

  7. Synthetic coprecipitates of exopolysaccharides and ferrihydrite. Part II: Siderophore-promoted dissolution

    Science.gov (United States)

    Mikutta, Christian; Kretzschmar, Ruben

    2008-02-01

    Ferrihydrite (Fh) coprecipitated with exopolymers of plants and microbes may differ in its geochemical reactivity from its abiotic counterpart. We synthesized Fh in the presence and absence of acid polysaccharides (polygalacturonic acid (PGA), alginate, xanthan) and characterized the physical and structural properties of the precipitates formed [Mikutta C., Mikutta R., Bonneville S., Wagner F., Voegelin A., Christl I. and Kretzschmar R. (2008) Synthetic coprecipitates of exopolysaccharides and ferrihydrite. Part I: Characterization. Geochim. Cosmochim. Acta]. In this paper, we focus on the reactivity of PGA and alginate coprecipitates and pure Fh, and studied their interaction with the microbial siderophore desferrioxamine B (DFOB) in the presence and absence of low molecular weight organic (LMWO) acid anions (malate, citrate). Batch adsorption and dissolution experiments were performed in the dark at pH 7 in 10 mM NaClO 4 background electrolyte. In the dissolution experiments, different modes of ligand addition were applied (single, simultaneous, stepwise). With an estimated Langmuir sorption maximum of 15 mmol/mol Fe, a PGA coprecipitate with 11% C org sorbed about four times as much DFOB as pure Fh, and the amount of DFOB sorbed was ˜4-fold larger than estimated from the sum of DFOB sorption to pure Fh and PGA alone. The apparent initial dissolution rates, Rapp-initial, and pseudo-first order rate coefficients, k, of the coprecipitates exceeded those of pure Fh by up to two orders of magnitude. Citrate and malate exerted a strong synergistic effect on the DFOB-promoted dissolution of pure Fh, whereas synergistic effects of both anions were absent or negligible for the coprecipitates. Rapp-initial of the citrate and DFOB-promoted dissolution of PGA coprecipitates increased with increasing molar C/Fe ratio of the coprecipitates, independent of the charge of the LMWO ligand. Our results indicate that polyuronates stabilize Fh particles sterically and /or

  8. Multiple modes of iron uptake by the filamentous, siderophore-producing cyanobacterium, Anabaena sp. PCC 7120.

    Science.gov (United States)

    Rudolf, Mareike; Kranzler, Chana; Lis, Hagar; Margulis, Ketty; Stevanovic, Mara; Keren, Nir; Schleiff, Enrico

    2015-08-01

    Iron is a member of a small group of nutrients that limits aquatic primary production. Mechanisms for utilizing iron have to be efficient and adapted according to the ecological niche. In respect to iron acquisition cyanobacteria, prokaryotic oxygen evolving photosynthetic organisms can be divided into siderophore- and non-siderophore-producing strains. The results presented in this paper suggest that the situation is far more complex. To understand the bioavailability of different iron substrates and the advantages of various uptake strategies, we examined iron uptake mechanisms in the siderophore-producing cyanobacterium Anabaena sp. PCC 7120. Comparison of the uptake of iron complexed with exogenous (desferrioxamine B, DFB) or to self-secreted (schizokinen) siderophores by Anabaena sp. revealed that uptake of the endogenous produced siderophore complexed to iron is more efficient. In addition, Anabaena sp. is able to take up dissolved, ferric iron hydroxide species (Fe') via a reductive mechanism. Thus, Anabaena sp. exhibits both, siderophore- and non-siderophore-mediated iron uptake. While assimilation of Fe' and FeDFB are not induced by iron starvation, FeSchizokinen uptake rates increase with increasing iron starvation. Consequently, we suggest that Fe' reduction and uptake is advantageous for low-density cultures, while at higher densities siderophore uptake is preferred.

  9. Trihydroxamate siderophore-fluoroquinolone conjugates are selective sideromycin antibiotics that target Staphylococcus aureus.

    Science.gov (United States)

    Wencewicz, Timothy A; Long, Timothy E; Möllmann, Ute; Miller, Marvin J

    2013-03-20

    Siderophores are multidentate iron(III) chelators used by bacteria for iron assimilation. Sideromycins, also called siderophore-antibiotic conjugates, are a unique subset of siderophores that enter bacterial cells via siderophore uptake pathways and deliver the toxic antibiotic in a "Trojan horse" fashion. Sideromycins represent a novel antibiotic delivery technology with untapped potential for developing sophisticated microbe-selective antibacterial agents that limit the emergence of bacterial resistance. The chemical synthesis of a series of mono-, bis-, and trihydroxamate sideromycins are described here along with their biological evaluation in antibacterial susceptibility assays. The linear hydroxamate siderophores used for the sideromycins in this study were derived from the ferrioxamine family and inspired by the naturally occurring salmycin sideromycins. The antibacterial agents used were a β-lactam carbacepholosporin, Lorabid, and a fluoroquinolone, ciprofloxacin, chosen for the different locations of their biological targets, the periplasm (extracellular) and the cytoplasm (intracellular). The linear hydroxamate-based sideromycins were selectively toxic toward Gram-positive bacteria, especially Staphylococcus aureus SG511 (MIC = 1.0 μM for the trihydroxamate-fluoroquinolone sideromycin). Siderophore-sideromycin competition assays demonstrated that only the fluoroquinolone sideromycins required membrane transport to reach their cytoplasmic biological target and that a trihydroxamate siderophore backbone was required for protein-mediated active transport of the sideromycins into S. aureus cells via siderophore uptake pathways. This work represents a comprehensive study of linear hydroxamate sideromycins and teaches how to build effective hydroxamate-based sideromycins as Gram-positive selective antibiotic agents.

  10. Digital image quantification of siderophores on agar plates

    Directory of Open Access Journals (Sweden)

    Megan Y. Andrews

    2016-03-01

    Full Text Available This article presents visual image data and detailed methodology for the use of a new method for quantifying the exudation of siderophores during fungal growth. The data include images showing time series for calibration, fungal exudation, and negative controls, as well as replication accuracy information. In addition, we provide detailed protocols for making CAS assay layer plates, the digital analysis protocol for determining area of color change, and discuss growth media that do and do not work with the layer plate method. The results of these data, their interpretation, and further discussion can be found in Andrews et al., 2016 [1].

  11. The hydroxamate siderophore rhequichelin is required for virulence of the pathogenic actinomycete Rhodococcus equi.

    Science.gov (United States)

    Miranda-Casoluengo, Raúl; Coulson, Garry B; Miranda-Casoluengo, Aleksandra; Vázquez-Boland, José A; Hondalus, Mary K; Meijer, Wim G

    2012-12-01

    We previously showed that the facultative intracellular pathogen Rhodococcus equi produces a nondiffusible and catecholate-containing siderophore (rhequibactin) involved in iron acquisition during saprophytic growth. Here, we provide evidence that the rhbABCDE cluster directs the biosynthesis of a hydroxamate siderophore, rhequichelin, that plays a key role in virulence. The rhbC gene encodes a nonribosomal peptide synthetase that is predicted to produce a tetrapeptide consisting of N(5)-formyl-N(5)-hydroxyornithine, serine, N(5)-hydroxyornithine, and N(5)-acyl-N(5)-hydroxyornithine. The other rhb genes encode putative tailoring enzymes mediating modification of ornithine residues incorporated into the hydroxamate product of RhbC. Transcription of rhbC was upregulated during growth in iron-depleted medium, suggesting that it plays a role in iron acquisition. This was confirmed by deletion of rhbCD, rendering the resulting strain R. equi SID2 unable to grow in the presence of the iron chelator 2,2-dipyridyl. Supernatant of the wild-type strain rescued the phenotype of R. equi SID2. The importance of rhequichelin in virulence was highlighted by the rapid increase in transcription levels of rhbC following infection and the inability of R. equi SID2 to grow within macrophages. Unlike the wild-type strain, R. equi SID2 was unable to replicate in vivo and was rapidly cleared from the lungs of infected mice. Rhequichelin is thus a key virulence-associated factor, although nonpathogenic Rhodococcus species also appear to produce rhequichelin or a structurally closely related compound. Rhequichelin biosynthesis may therefore be considered an example of cooption of a core actinobacterial trait in the evolution of R. equi virulence.

  12. Siderophore-mediated iron dissolution from nontronites is controlled by mineral cristallochemistry

    Directory of Open Access Journals (Sweden)

    Damien eParrello

    2016-03-01

    Full Text Available Bacteria living in oxic environments experience iron deficiency due to limited solubility and slow dissolution kinetics of iron-bearing minerals. To cope with iron deprivation, aerobic bacteria have evolved various strategies, including release of siderophores or other organic acids that scavenge external Fe(III and deliver it to the cells. This research investigated the role of siderophores produced by Pseudomonas aeruginosa in the acquisition of Fe(III from two iron-bearing colloidal nontronites (NAu-1 and NAu-2, comparing differences in bioavailability related with site occupancy and distribution of Fe(III in the two lattices. To avoid both the direct contact of the mineral colloids with the bacterial cells and the uncontrolled particle aggregation, nontronite suspensions were homogenously dispersed in a porous silica gel before the dissolution experiments. A multiparametric approach coupling UV-vis spectroscopy and spectral decomposition algorithm was implemented to monitor simultaneously the solubilisation of Fe and the production of pyoverdine in microplate-based batch experiments. Both nontronites released Fe in a particle concentration-dependent manner when incubated with the wild-type P. aeruginosa strain, however iron released from NAu-2 was substantially greater than from NAu-1. The profile of organic acids produced in both cases was similar and may not account for the difference in the iron dissolution efficiency. In contrast, a pyoverdine-deficient mutant was unable to mobilise Fe(III from either nontronite, whereas iron dissolution occurred in abiotic experiments conducted with purified pyoverdine. Overall, our data provide evidence that P. aeruginosa indirectly mobilise Fe from nontronites primarily through the production of pyoverdine. The structural Fe present on the edges of Nau-2 rather than Nau-1 particles appears to be more bio-accessible, indicating that the distribution of Fe, in the tetrahedron and/or in the octahedron

  13. Siderophores, the answer for micro to nanosized asbestos fibre related health hazard

    Science.gov (United States)

    Bhattacharya, Shabori; Ledwani, Lalita; John, P. J.

    2016-04-01

    Recent studies on the potential toxicity of High Aspect Ratio Nanoparticles (HARN) has yet once again reinforced the health hazard imposed by asbestos fibres ranging from nano to micro size. Asbestos a naturally occurring fibrous mineral declared a Group I definite carcinogen by IARC (International Agency for Research on Cancer), a unit of WHO in the year 1987, has been extensively used since World War II to the near past for various commercial products. According to the most recent World Health Organization (WHO) estimates, asbestos-related diseases, resulting from exposure at workplace claims more than 107000 lives every year worldwide. The various types of toxic effects induced by asbestos in humans include - i) inflammation and fibrogenesis of lung, ii) mesothelioma iii) asbestosis and iv) bronchogenic carcinoma. The stability of asbestos in natural environment and its biological aggressiveness is related to their fibrous structure and dimensions. The actual risk associated with the exposure to nanosized asbestos, which is still unknown and escapes most regulations worldwide, has been shown in various toxicity assessment studies conducted on various animal models.In an effort to reduce the size of asbestos and therby its toxicity by limiting its biopersistence, oxalic acid treatment of asbestos coupled to power ultrasound treatment was carried out. The nanosized particles formed were still found to retain their hazardous effect. Similar were the results obtained on strong acid treatment of asbestos as well. A probable solution to the asbestos toxicity problem therefore envisaged was bioremediation. This involved the secretion of iron chelating molecules termed siderophores by microbes, which are of significance due to their ability to form very stable and soluble complexes with iron. Iron in asbestos composition is a major factor responsible for its carcinogenicity, removal or extraction of which would prove to be an effective answer to the worldwide problem

  14. Catechol siderophores repress the pyochelin pathway and activate the enterobactin pathway in Pseudomonas aeruginosa: an opportunity for siderophore-antibiotic conjugates development.

    Science.gov (United States)

    Gasser, Véronique; Baco, Etienne; Cunrath, Olivier; August, Pamela Saint; Perraud, Quentin; Zill, Nicolas; Schleberger, Christian; Schmidt, Alexander; Paulen, Aurélie; Bumann, Dirk; Mislin, Gaëtan L A; Schalk, Isabelle J

    2016-03-01

    Previous studies have suggested that antibiotic vectorization by siderophores (iron chelators produced by bacteria) considerably increases the efficacy of such drugs. The siderophore serves as a vector: when the pathogen tries to take up iron via the siderophore, it also takes up the antibiotic. Catecholates are among the most common iron-chelating compounds used in synthetic siderophore-antibiotic conjugates. Using reverse transcription polymerase chain reaction and proteomic approaches, we showed that the presence of catecholate compounds in the medium of Pseudomonas aeruginosa led to strong activation of the transcription and expression of the outer membrane transporter PfeA, the ferri-enterobactin importer. Iron-55 uptake assays on bacteria with and without PfeA expression confirmed that catechol compounds imported iron into P. aeruginosa cells via PfeA. Uptake rates were between 0.3 × 10(3) and 2 × 10(3) Fe atoms/bacterium/min according to the used catechol siderophore in iron-restricted medium, and remained as high as 0.8 × 10(3) Fe atoms/bacterium/min for enterobactin, even in iron-rich medium. Reverse transcription polymerase chain reaction and proteomic approaches showed that in parallel to this switching on of PfeA expression, a repression of the expression of pyochelin (PCH) pathway genes (PCH being one of the two siderophores produced by P. aeruginosa for iron acquisition) was observed.

  15. Klebsiella pneumoniae Siderophores Induce Inflammation, Bacterial Dissemination, and HIF-1α Stabilization during Pneumonia

    Science.gov (United States)

    Holden, Victoria I.; Breen, Paul; Houle, Sébastien; Dozois, Charles M.

    2016-01-01

    ABSTRACT Klebsiella pneumoniae is a Gram-negative pathogen responsible for a wide range of infections, including pneumonia and bacteremia, and is rapidly acquiring antibiotic resistance. K. pneumoniae requires secretion of siderophores, low-molecular-weight, high-affinity iron chelators, for bacterial replication and full virulence. The specific combination of siderophores secreted by K. pneumoniae during infection can impact tissue localization, systemic dissemination, and host survival. However, the effect of these potent iron chelators on the host during infection is unknown. In vitro, siderophores deplete epithelial cell iron, induce cytokine secretion, and activate the master transcription factor hypoxia inducible factor-1α (HIF-1α) protein that controls vascular permeability and inflammatory gene expression. Therefore, we hypothesized that siderophore secretion by K. pneumoniae directly contributes to inflammation and bacterial dissemination during pneumonia. To examine the effects of siderophore secretion independently of bacterial growth, we performed infections with tonB mutants that persist in vivo but are deficient in siderophore import. Using a murine model of pneumonia, we found that siderophore secretion by K. pneumoniae induces the secretion of interleukin-6 (IL-6), CXCL1, and CXCL2, as well as bacterial dissemination to the spleen, compared to siderophore-negative mutants at an equivalent bacterial number. Furthermore, we determined that siderophore-secreting K. pneumoniae stabilized HIF-1α in vivo and that bacterial dissemination to the spleen required alveolar epithelial HIF-1α. Our results indicate that siderophores act directly on the host to induce inflammatory cytokines and bacterial dissemination and that HIF-1α is a susceptibility factor for bacterial invasion during pneumonia. PMID:27624128

  16. Klebsiella pneumoniae Siderophores Induce Inflammation, Bacterial Dissemination, and HIF-1α Stabilization during Pneumonia

    Directory of Open Access Journals (Sweden)

    Victoria I. Holden

    2016-09-01

    Full Text Available Klebsiella pneumoniae is a Gram-negative pathogen responsible for a wide range of infections, including pneumonia and bacteremia, and is rapidly acquiring antibiotic resistance. K. pneumoniae requires secretion of siderophores, low-molecular-weight, high-affinity iron chelators, for bacterial replication and full virulence. The specific combination of siderophores secreted by K. pneumoniae during infection can impact tissue localization, systemic dissemination, and host survival. However, the effect of these potent iron chelators on the host during infection is unknown. In vitro, siderophores deplete epithelial cell iron, induce cytokine secretion, and activate the master transcription factor hypoxia inducible factor-1α (HIF-1α protein that controls vascular permeability and inflammatory gene expression. Therefore, we hypothesized that siderophore secretion by K. pneumoniae directly contributes to inflammation and bacterial dissemination during pneumonia. To examine the effects of siderophore secretion independently of bacterial growth, we performed infections with tonB mutants that persist in vivo but are deficient in siderophore import. Using a murine model of pneumonia, we found that siderophore secretion by K. pneumoniae induces the secretion of interleukin-6 (IL-6, CXCL1, and CXCL2, as well as bacterial dissemination to the spleen, compared to siderophore-negative mutants at an equivalent bacterial number. Furthermore, we determined that siderophore-secreting K. pneumoniae stabilized HIF-1α in vivo and that bacterial dissemination to the spleen required alveolar epithelial HIF-1α. Our results indicate that siderophores act directly on the host to induce inflammatory cytokines and bacterial dissemination and that HIF-1α is a susceptibility factor for bacterial invasion during pneumonia.

  17. Effects of pure eicosapentaenoic and docosahexaenoic acids on oxidative stress, inflammation and body fat mass in patients with type 2 diabetes

    Directory of Open Access Journals (Sweden)

    Fatemeh Azizi-Soleiman

    2013-01-01

    Full Text Available Background: N-3 Fatty acids reduce the risk of cardiovascular disease. Previous studies have shown that they may reduce inflammation, oxidative stress, and fat mass in patients with type 2 diabetes, but the results are inconclusive, due, in part, to type of omega-3 fatty acids used. The aim of this study was to determine the effects of pure eicosapentaenoic (EPA and docosahexaenoic acids (DHA, the two major omega-3 fatty acids, on inflammation, oxidative stress, and fat mass in patients with type 2 diabetes. Methods: Sixty patients with DM-II were randomly allocated to receive daily either ~1 gr EPA or ~1 gr DHA, or a canola oil as placebo for 12 weeks in a randomized triple-blind, placebo-controlled trial. Serum MDA, CRP, body weight, BMI, and fat mass were measured at baseline and after intervention. Results: Forty-five patients with a mean (±SD age of 54.9 ± 8.2 years with BMI of 27.6 ± 4.1 kg/m 2 and fasting blood glucose 96.0 ± 16.2 mg/dl completed the intervention. Neither EPA nor DHA had significant effects on serum FBS, C-reactive protein, body weight, BMI, and fat mass after intervention (P > 0.05. In addition, while MDA increased 18% in the placebo group (P = 0.009, it did not change in the EPA or DHA group (P > 0.05. Conclusions: Twelve weeks of supplementation with 1gr/d EPA or DHA prevent increasing oxidative stress without changing marker of inflammation. This study is the first report demonstrating that neither EPA nor DHA have effects on body fat mass in type 2 diabetic patients.

  18. Siderophore-based microbial adaptations to iron scarcity across the eastern Pacific Ocean

    Science.gov (United States)

    Boiteau, Rene M.; Mende, Daniel R.; Hawco, Nicholas J.; McIlvin, Matthew R.; Fitzsimmons, Jessica N.; Saito, Mak A.; Sedwick, Peter N.; DeLong, Edward F.; Repeta, Daniel J.

    2016-12-01

    Nearly all iron dissolved in the ocean is complexed by strong organic ligands of unknown composition. The effect of ligand composition on microbial iron acquisition is poorly understood, but amendment experiments using model ligands show they can facilitate or impede iron uptake depending on their identity. Here we show that siderophores, organic compounds synthesized by microbes to facilitate iron uptake, are a dynamic component of the marine ligand pool in the eastern tropical Pacific Ocean. Siderophore concentrations in iron-deficient waters averaged 9 pM, up to fivefold higher than in iron-rich coastal and nutrient-depleted oligotrophic waters, and were dominated by amphibactins, amphiphilic siderophores with cell membrane affinity. Phylogenetic analysis of amphibactin biosynthetic genes suggests that the ability to produce amphibactins has transferred horizontally across multiple Gammaproteobacteria, potentially driven by pressures to compete for iron. In coastal and oligotrophic regions of the eastern Pacific Ocean, amphibactins were replaced with lower concentrations (1–2 pM) of hydrophilic ferrioxamine siderophores. Our results suggest that organic ligand composition changes across the surface ocean in response to environmental pressures. Hydrophilic siderophores are predominantly found across regions of the ocean where iron is not expected to be the limiting nutrient for the microbial community at large. However, in regions with intense competition for iron, some microbes optimize iron acquisition by producing siderophores that minimize diffusive losses to the environment. These siderophores affect iron bioavailability and thus may be an important component of the marine iron cycle.

  19. Contribution of siderophore systems to growth and urinary tract colonization of asymptomatic bacteriuria Escherichia coli

    DEFF Research Database (Denmark)

    Watts, Rebecca E; Totsika, Makrina; Challinor, Victoria L

    2012-01-01

    The molecular mechanisms that define asymptomatic bacteriuria (ABU) Escherichia coli colonization of the human urinary tract remain to be properly elucidated. Here, we utilize ABU E. coli strain 83972 as a model to dissect the contribution of siderophores to iron acquisition, growth, fitness......, and colonization of the urinary tract. We show that E. coli 83972 produces enterobactin, salmochelin, aerobactin, and yersiniabactin and examine the role of these systems using mutants defective in siderophore biosynthesis and uptake. Enterobactin and aerobactin contributed most to total siderophore activity...

  20. Sideróforos: uma resposta dos microorganismos Siderophores: a microorganism's answer

    Directory of Open Access Journals (Sweden)

    Anna Maria Canavarro Benite

    2002-12-01

    Full Text Available Siderophores (from the Greek: "iron carriers" are defined as relatively low molecular weight, ferric ion specific chelating agents elaborated by microorganisms growing under low iron stress. The role of these compounds is to scavenge iron from the environment and to make this essential chemical element available to the microbial cell. The present paper is a brief presentation of siderophore coordination chemistry with emphasis on those aspects relevant to the transportation of iron (III complexes across biological membranes. Finally, the role of siderophores in infection and their clinical potential as iron scavenging molecules are reviewed.

  1. Effect of heavy-metal on synthesis of siderophores by Pseudomonas aeruginosa ZGKD3

    Science.gov (United States)

    Shi, Peili; Xing, Zhukang; Zhang, Yuxiu; Chai, Tuanyao

    2017-01-01

    Most siderophore-producing bacteria could improve the plant growth. Here, the effect of heavy-metal on the growth, total siderophore and pyoverdine production of the Cd tolerance Pseudomonas aeruginosa ZGKD3 were investigated. The results showed that ZGKD3 exhibited tolerance to heavy metals, and the metal tolerance decreased in the order Mn2+>Pb2+>Ni2+>Cu2+>Zn2+>Cd2+. The total siderophore and pyoverdine production of ZGKD3 induced by metals of Cd2+, Cu2+, Zn2+, Ni2+, Pb2+ and Mn2+ were different, the total siderophore and pyoverdine production reduced in the order Cd2+>Pb2+>Mn2+>Ni2+>Zn2+ >Cu2+ and Zn2+>Cd2+>Mn2+>Pb2+>Ni2+>Cu2+, respectively. These results suggested that ZGKD3 could grow in heavy-metal contaminated soil and had the potential of improving phytoremediation efficiency in Cd and Zn contaminated soils.

  2. Variation in siderophore biosynthetic gene distribution and production across environmental and faecal populations of Escherichia coli.

    Directory of Open Access Journals (Sweden)

    Laura J Searle

    Full Text Available Iron is essential for Escherichia coli growth and survival in the host and the external environment, but its availability is generally low due to the poor solubility of its ferric form in aqueous environments and the presence of iron-withholding proteins in the host. Most E. coli can increase access to iron by excreting siderophores such as enterobactin, which have a very strong affinity for Fe3+. A smaller proportion of isolates can generate up to 3 additional siderophores linked with pathogenesis; aerobactin, salmochelin, and yersiniabactin. However, non-pathogenic E. coli are also able to synthesise these virulence-associated siderophores. This raises questions about their role in the ecology of E. coli, beyond virulence, and whether specific siderophores might be linked with persistence in the external environment. Under the assumption that selection favours phenotypes that confer a fitness advantage, we compared siderophore production and gene distribution in E. coli isolated either from agricultural plants or the faeces of healthy mammals. This population-level comparison has revealed that under iron limiting growth conditions plant-associated isolates produced lower amounts of siderophores than faecal isolates. Additionally, multiplex PCR showed that environmental isolates were less likely to contain loci associated with aerobactin and yersiniabactin synthesis. Although aerobactin was linked with strong siderophore excretion, a significant difference in production was still observed between plant and faecal isolates when the analysis was restricted to strains only able to synthesise enterobactin. This finding suggests that the regulatory response to iron limitation may be an important trait associated with adaptation to the non-host environment. Our findings are consistent with the hypothesis that the ability to produce multiple siderophores facilitates E. coli gut colonisation and plays an important role in E. coli commensalism.

  3. Hemolytic Activity and Siderophore Production in Different Aeromonas Species Isolated from Fish

    OpenAIRE

    Santos, Jesús A.; González, César J.; Otero, Andrés; García-López, María-Luisa

    1999-01-01

    The hemolytic activity and siderophore production of several strains of motile aeromonads were determined. The hemolytic activity of Aeromonas caviae and Aeromonas eucrenophila was enhanced after trypsinization of the samples. The enhancement of hemolysis was observed in strains that carried an aerolysin-like gene, detected by a PCR procedure. Siderophore production was demonstrated in all but one strain of Aeromonas jandaei. No apparent relationship was observed between the presence of plasm...

  4. AmcA - a putative mitochondrial ornithine transporter supporting fungal siderophore biosynthesis

    Directory of Open Access Journals (Sweden)

    Lukas eSchafferer

    2015-04-01

    Full Text Available Iron is an essential nutrient required for a wide range of cellular processes. The opportunistic fungal pathogen Aspergillus fumigatus employs low-molecular mass iron-specific chelators, termed siderophores, for uptake, storage and intracellular iron distribution, which play a crucial role in the pathogenicity of this fungus. Siderophore biosynthesis depends on coordination with the supply of its precursor ornithine, produced mitochondrially from glutamate or cytosolically via hydrolysis of arginine. In this study, we demonstrate a role of the putative mitochondrial transporter AmcA (AFUA_8G02760 in siderophore biosynthesis of A. fumigatus.Consistent with a role in cellular ornithine handling, AmcA-deficiency resulted in decreased cellular ornithine and arginine contents as well as decreased siderophore production on medium containing glutamine as the sole nitrogen source. In support, arginine and ornithine as nitrogen sources did not impact siderophore biosynthesis due to cytosolic ornithine availability. As revealed by Northern blot analysis, transcript levels of siderophore biosynthetic genes were unresponsive to the cellular ornithine level. In contrast to siderophore production, AmcA deficiency did only mildly decrease the cellular polyamine content, demonstrating cellular prioritization of ornithine use. Nevertheless, AmcA-deficiency increased the susceptibility of A. fumigatus to the polyamine biosynthesis inhibitor eflornithine, most likely due to the decreased ornithine pool. AmcA-deficiency decreased the growth rate particularly on ornithine as the sole nitrogen source during iron starvation and sufficiency, indicating an additional role in the metabolism and fitness of A. fumigatus, possibly in mitochondrial ornithine import. In the Galleria mellonella infection model, AmcA-deficiency did not affect virulence of A. fumigatus, most likely due to the residual siderophore production and arginine availability in this host niche.

  5. Pure Spinors for General Backgrounds

    CERN Document Server

    Fre', Pietro

    2008-01-01

    We show the equivalence of the different types of pure spinor constraints geometrically derived from the Free Differential Algebras of N=2 d=10 supergravities. Firstly, we compute the general solutions of these constraints, using both a G_2 and an SO(8) covariant decomposition of the 10d chiral spinors. Secondly, we verify that the number of independent degrees of freedom is equal to that implied by the Poincare' pure spinor constraints so-far used for superstrings, namely twenty two. Thirdly, we show the equivalence between the FDA type IIA/B constraints among each other and with the Poincare' ones.

  6. Hunger for iron: the alternative siderophore iron scavenging systems in highly virulent Yersinia.

    Directory of Open Access Journals (Sweden)

    Alexander eRakin

    2012-11-01

    Full Text Available Low molecular weight siderophores are used by many living organisms to scavenge scarcely available ferric iron. Presence of at least a single siderophore-based iron acquisition system is usually acknowledged as a virulence-associated trait and a prerequisite to become an efficient and successful pathogen. Currently it is assumed that yersiniabactin (Ybt is the solely functional endogenous siderophore iron uptake system in highly virulent Yersinia (Yersinia pestis, Y. pseudotuberculosis and Y. enterocolitica biotype 1B. Genes responsible for biosynthesis, transport and regulation of the yersiniabactin (ybt production are clustered on a mobile genetic element, the High Pathogenicity Island (HPI that is responsible for broad dissemination of the ybt genes in Enterobacteriaceae. However, the ybt gene cluster is absent from nearly half of Y. pseudotuberculosis O3 isolates and epidemic Y. pseudotuberculosis O1 isolates responsible for the Far East Scarlet-like Fever. Several potential siderophore-mediated iron uptake gene clusters are documented in Yersinia genomes, however neither of them have been proven to be functional. It has been suggested that at least two siderophores alternative to Ybt may operate in the highly virulent Yersinia pestis / Y. pseudotuberculosis group, and are referred to as pseudochelin (Pch and yersiniachelin (Ych. Furthermore, most sporadic Y. pseudotuberculosis O1 strains possess gene clusters encoding all three iron scavenging systems. Thus, the Ybt system appears not to be the sole endogenous siderophore iron uptake system in the highly virulent yersiniae and may be efficiently substituted and / or supplemented by alternative iron scavenging systems.

  7. Pure Parsimony Xor Haplotyping

    CERN Document Server

    Bonizzoni, Paola; Dondi, Riccardo; Pirola, Yuri; Rizzi, Romeo

    2010-01-01

    The haplotype resolution from xor-genotype data has been recently formulated as a new model for genetic studies. The xor-genotype data is a cheaply obtainable type of data distinguishing heterozygous from homozygous sites without identifying the homozygous alleles. In this paper we propose a formulation based on a well-known model used in haplotype inference: pure parsimony. We exhibit exact solutions of the problem by providing polynomial time algorithms for some restricted cases and a fixed-parameter algorithm for the general case. These results are based on some interesting combinatorial properties of a graph representation of the solutions. Furthermore, we show that the problem has a polynomial time k-approximation, where k is the maximum number of xor-genotypes containing a given SNP. Finally, we propose a heuristic and produce an experimental analysis showing that it scales to real-world large instances taken from the HapMap project.

  8. Pure parsimony xor haplotyping.

    Science.gov (United States)

    Bonizzoni, Paola; Della Vedova, Gianluca; Dondi, Riccardo; Pirola, Yuri; Rizzi, Romeo

    2010-01-01

    The haplotype resolution from xor-genotype data has been recently formulated as a new model for genetic studies. The xor-genotype data is a cheaply obtainable type of data distinguishing heterozygous from homozygous sites without identifying the homozygous alleles. In this paper, we propose a formulation based on a well-known model used in haplotype inference: pure parsimony. We exhibit exact solutions of the problem by providing polynomial time algorithms for some restricted cases and a fixed-parameter algorithm for the general case. These results are based on some interesting combinatorial properties of a graph representation of the solutions. Furthermore, we show that the problem has a polynomial time k-approximation, where k is the maximum number of xor-genotypes containing a given single nucleotide polymorphisms (SNP). Finally, we propose a heuristic and produce an experimental analysis showing that it scales to real-world large instances taken from the HapMap project.

  9. Siderophore-Producing Bacteria from a Sand Dune Ecosystem and the Effect of Sodium Benzoate on Siderophore Production by a Potential Isolate

    Directory of Open Access Journals (Sweden)

    Teja Gaonkar

    2012-01-01

    Full Text Available Bioremediation in natural ecosystems is dependent upon the availability of micronutrients and cofactors, of which iron is one of the essential elements. Under aerobic and alkaline conditions, iron oxidizes to Fe+3 creating iron deficiency. To acquire this essential growth-limiting nutrient, bacteria produce low-molecular-weight, high-affinity iron chelators termed siderophores. In this study, siderophore-producing bacteria from rhizosphere and nonrhizosphere areas of coastal sand dunes were isolated using a culture-dependent approach and were assigned to 8 different genera with the predominance of Bacillus sp. Studies on the ability of these isolates to grow on sodium benzoate revealed that a pigmented bacterial culture TMR2.13 identified as Pseudomonas aeruginosa showed growth on mineral salts medium (MSM with 2% of sodium benzoate and produced a yellowish fluorescent siderophore identified as pyoverdine. This was inhibited above 54 μM of added iron in MSM with glucose without affecting growth, while, in presence of sodium benzoate, siderophore was produced even up to the presence of 108 μM of added iron. Increase in the requirement of iron for metabolism of aromatic compounds in ecosystems where the nutrient deficiencies occur naturally would be one of the regulating factors for the bioremediation process.

  10. Siderophore-producing bacteria from a sand dune ecosystem and the effect of sodium benzoate on siderophore production by a potential isolate.

    Science.gov (United States)

    Gaonkar, Teja; Nayak, Pramoda Kumar; Garg, Sandeep; Bhosle, Saroj

    2012-01-01

    Bioremediation in natural ecosystems is dependent upon the availability of micronutrients and cofactors, of which iron is one of the essential elements. Under aerobic and alkaline conditions, iron oxidizes to Fe(+3) creating iron deficiency. To acquire this essential growth-limiting nutrient, bacteria produce low-molecular-weight, high-affinity iron chelators termed siderophores. In this study, siderophore-producing bacteria from rhizosphere and nonrhizosphere areas of coastal sand dunes were isolated using a culture-dependent approach and were assigned to 8 different genera with the predominance of Bacillus sp. Studies on the ability of these isolates to grow on sodium benzoate revealed that a pigmented bacterial culture TMR2.13 identified as Pseudomonas aeruginosa showed growth on mineral salts medium (MSM) with 2% of sodium benzoate and produced a yellowish fluorescent siderophore identified as pyoverdine. This was inhibited above 54 μM of added iron in MSM with glucose without affecting growth, while, in presence of sodium benzoate, siderophore was produced even up to the presence of 108 μM of added iron. Increase in the requirement of iron for metabolism of aromatic compounds in ecosystems where the nutrient deficiencies occur naturally would be one of the regulating factors for the bioremediation process.

  11. Bacterial siderophores efficiently provide iron to iron-starved tomato plants in hydroponics culture.

    Science.gov (United States)

    Radzki, W; Gutierrez Mañero, F J; Algar, E; Lucas García, J A; García-Villaraco, A; Ramos Solano, B

    2013-09-01

    Iron is one of the essential elements for a proper plant development. Providing plants with an accessible form of iron is crucial when it is scant or unavailable in soils. Chemical chelates are the only current alternative and are highly stable in soils, therefore, posing a threat to drinking water. The aim of this investigation was to quantify siderophores produced by two bacterial strains and to determine if these bacterial siderophores would palliate chlorotic symptoms of iron-starved tomato plants. For this purpose, siderophore production in MM9 medium by two selected bacterial strains was quantified, and the best was used for biological assay. Bacterial culture media free of bacteria (S) and with bacterial cells (BS), both supplemented with Fe were delivered to 12-week-old plants grown under iron starvation in hydroponic conditions; controls with full Hoagland solution, iron-free Hoagland solution and water were also conducted. Treatments were applied twice along the experiment, with a week in between. At harvest, plant yield, chlorophyll content and nutritional status in leaves were measured. Both the bacterial siderophore treatments significantly increased plant yield, chlorophyll and iron content over the positive controls with full Hoagland solution, indicating that siderophores are effective in providing Fe to the plant, either with or without the presence of bacteria. In summary, siderophores from strain Chryseobacterium C138 are effective in supplying Fe to iron-starved tomato plants by the roots, either with or without the presence of bacteria. Based on the amount of siderophores produced, an effective and economically feasible organic Fe chelator could be developed.

  12. Sixth form pure mathematics

    CERN Document Server

    Plumpton, C

    1968-01-01

    Sixth Form Pure Mathematics, Volume 1, Second Edition, is the first of a series of volumes on Pure Mathematics and Theoretical Mechanics for Sixth Form students whose aim is entrance into British and Commonwealth Universities or Technical Colleges. A knowledge of Pure Mathematics up to G.C.E. O-level is assumed and the subject is developed by a concentric treatment in which each new topic is used to illustrate ideas already treated. The major topics of Algebra, Calculus, Coordinate Geometry, and Trigonometry are developed together. This volume covers most of the Pure Mathematics required for t

  13. 循环球式电动助力转向器在纯电动客车上的应用%Application of Circulating Ball Type Electric Power Steering Gear to Pure Electric Buses

    Institute of Scientific and Technical Information of China (English)

    叶成友

    2015-01-01

    In view of the problems of the traditional circulating ball type steering gear now used in pure electric bus-es, such as difficult arrangement, high cost and great electric power consumption,the author introduces a circulating ball type electric power steering gear on pure electric buses.%针对目前纯电动客车上采用的传统循环球式转向器存在布置难度大、成本高、耗电量大等问题,介绍一种循环球式电动助力转向器在纯电动客车上的解决方案。

  14. Microbes adapt to iron scarcity through siderophore production across the eastern tropical Pacific

    Science.gov (United States)

    Repeta, D.; Boiteau, R.; Mende, D. R.; DeLong, E.

    2016-02-01

    Iron regulates microbial growth and carbon fixation rates in vast regions of the ocean characterized by high nutrient and low chlorophyll (HNLC) concentrations. As competition for bioavailable iron in HNLC regions intensifies, microbial communities face tremendous selective pressure to develop efficient uptake and utilization strategies that access the strong organic ligands controlling iron bioavailability in these areas. Using liquid chromatography mass spectrometry, we found 27 unique iron complexes in surface waters sampled across the GEOTRACES eastern tropical Pacific zonal cruise track, with a clear trend in the abundance of different ligands across nutrient regimes. We identified siderophores, compounds produced by microbes under iron stress to facilitate iron uptake, as important components of iron ligands. Siderophore composition varied dramatically across the region, reflecting adaptive microbial strategies for acquiring iron. Concentrations of amphibactins, amphiphilic siderophores with cell membrane affinity, were low in coastal waters, but reached 9pM in HNLC waters, while ferrioxamine concentrations were higher in coastal and oligotrophic regions (1-2pM). These spatial changes in siderophore distributions represents adaptations used by marine microbes to acquire iron under different ecological conditions. To infer the potential ocean-wide contribution of amphibactins to microbial iron acquisition, we investigated the distribution of amphibactin synthesis genes in the recently published TARA Oceans metagenomic catalogue. We found amphibactin synthesis genes were present in other major iron-starved regions, suggesting that adaptations involving siderophore utilization likely impact global marine ecosystem composition and productivity.

  15. Scavenging iron: a novel mechanism of plant immunity activation by microbial siderophores.

    Science.gov (United States)

    Aznar, Aude; Chen, Nicolas W G; Rigault, Martine; Riache, Nassima; Joseph, Delphine; Desmaële, Didier; Mouille, Grégory; Boutet, Stéphanie; Soubigou-Taconnat, Ludivine; Renou, Jean-Pierre; Thomine, Sébastien; Expert, Dominique; Dellagi, Alia

    2014-04-01

    Siderophores are specific ferric iron chelators synthesized by virtually all microorganisms in response to iron deficiency. We have previously shown that they promote infection by the phytopathogenic enterobacteria Dickeya dadantii and Erwinia amylovora. Siderophores also have the ability to activate plant immunity. We have used complete Arabidopsis transcriptome microarrays to investigate the global transcriptional modifications in roots and leaves of Arabidopsis (Arabidopsis thaliana) plants after leaf treatment with the siderophore deferrioxamine (DFO). Physiological relevance of these transcriptional modifications was validated experimentally. Immunity and heavy-metal homeostasis were the major processes affected by DFO. These two physiological responses could be activated by a synthetic iron chelator ethylenediamine-di(o-hydroxyphenylacetic) acid, indicating that siderophores eliciting activities rely on their strong iron-chelating capacity. DFO was able to protect Arabidopsis against the pathogenic bacterium Pseudomonas syringae pv tomato DC3000. Siderophore treatment caused local modifications of iron distribution in leaf cells visible by ferrocyanide and diaminobenzidine-H₂O₂ staining. Metal quantifications showed that DFO causes a transient iron and zinc uptake at the root level, which is presumably mediated by the metal transporter iron regulated transporter1 (IRT1). Defense gene expression and callose deposition in response to DFO were compromised in an irt1 mutant. Consistently, plant susceptibility to D. dadantii was increased in the irt1 mutant. Our work shows that iron scavenging is a unique mechanism of immunity activation in plants. It highlights the strong relationship between heavy-metal homeostasis and immunity.

  16. In Vitro Cultivation of 'Unculturable' Oral Bacteria, Facilitated by Community Culture and Media Supplementation with Siderophores.

    Science.gov (United States)

    Vartoukian, Sonia R; Adamowska, Aleksandra; Lawlor, Megan; Moazzez, Rebecca; Dewhirst, Floyd E; Wade, William G

    2016-01-01

    Over a third of oral bacteria are as-yet-uncultivated in-vitro. Siderophores have been previously shown to enable in-vitro growth of previously uncultivated bacteria. The objective of this study was to cultivate novel oral bacteria in siderophore-supplemented culture media. Various compounds with siderophore activity, including pyoverdines-Fe-complex, desferricoprogen and salicylic acid, were found to stimulate the growth of difficult-to-culture strains Prevotella sp. HOT-376 and Fretibacterium fastidiosum. Furthermore, pyrosequencing analysis demonstrated increased proportions of the as-yet-uncultivated phylotypes Dialister sp. HOT-119 and Megasphaera sp. HOT-123 on mixed culture plates supplemented with siderophores. Therefore a culture model was developed, which incorporated 15 μg siderophore (pyoverdines-Fe-complex or desferricoprogen) or 150 μl neat subgingival-plaque suspension into a central well on agar plates that were inoculated with heavily-diluted subgingival-plaque samples from subjects with periodontitis. Colonies showing satellitism were passaged onto fresh plates in co-culture with selected helper strains. Five novel strains, representatives of three previously-uncultivated taxa (Anaerolineae bacterium HOT-439, the first oral taxon from the Chloroflexi phylum to have been cultivated; Bacteroidetes bacterium HOT-365; and Peptostreptococcaceae bacterium HOT-091) were successfully isolated. All novel isolates required helper strains for growth, implying dependence on a biofilm lifestyle. Their characterisation will further our understanding of the human oral microbiome.

  17. Siderophore as a potential plant growth-promoting agent produced by Pseudomonas aeruginosa JAS-25.

    Science.gov (United States)

    Sulochana, M B; Jayachandra, S Y; Kumar, S Anil; Parameshwar, A B; Reddy, K Mohan; Dayanand, A

    2014-09-01

    Siderophores scavenges Fe(+3) from the vicinity of the roots of plants, and thus limit the amount of iron required for the growth of pathogens such as Fusarium oxysporum, Pythium ultimum, and Fusarium udum, which cause wilt and root rot disease in crops. The ability of Pseudomonas to grow and to produce siderophore depends upon the iron content, pH, and temperature. Maximum yield of siderophore of 130 μM was observed at pH 7.0 ± 0.2 and temperature of 30 °C at 30 h. The threshold level of iron was 50 μM, which increases up to 150 μM, favoring growth but drastically affecting the production of siderophore by Pseudomonas aeruginosa JAS-25. The seeds of agricultural crops like Cicer arietinum (chick pea), Cajanus cajan (pigeon pea), and Arachis hypogaea (ground nut) were treated with P. aeruginosa JAS-25, which enhanced the seed germination, root length, shoot length, and dry weight of chick pea, pigeon pea, and ground nut plants under pot studies. The efficient growth of the plants was not only due to the biocontrol activity of the siderophore produced by P. aeruginosa JAS-25 but also may be by the production of indole acetic acid (IAA), which influences the growth of the plants as phytohormones.

  18. The long-overlooked enzymology of a nonribosomal peptide synthetase-independent pathway for virulence-conferring siderophore biosynthesis.

    Science.gov (United States)

    Oves-Costales, Daniel; Kadi, Nadia; Challis, Gregory L

    2009-11-21

    Siderophores are high-affinity ferric iron chelators biosynthesised and excreted by most microorganisms that play an important role in iron acquisition. Siderophore-mediated scavenging of ferric iron from hosts contributes significantly to the virulence of pathogenic microbes. As a consequence siderophore biosynthesis is an attractive target for chemotherapeutic intervention. Two main pathways for siderophore biosynthesis exist in microbes. One pathway involves nonribosomal peptide synthetase (NRPS) multienzymes while the other is NRPS-independent. The enzymology of NRPS-mediated siderophore biosynthesis has been extensively studied for more than a decade. In contrast, the enzymology of NRPS-independent siderophore (NIS) biosynthesis was overlooked for almost thirty years since the first genetic characterisation of the NIS biosynthetic pathway to aerobactin. However, the past three years have witnessed an explosion of interest in the enzymology of NIS synthetases, the key enzymes in the assembly of siderophores via the NIS pathway. The biochemical characterisation of ten purified recombinant synthetases has been reported since 2007, along with the first structural characterisation of a synthetase by X-ray crystallography in 2009. In this feature article we summarise the recent progress that has been made in understanding the long-overlooked enzymology of NRPS-independent siderophore biosynthesis, highlight important remaining questions, and suggest likely directions for future research.

  19. Creation of Optically Pure Crystals from a Meso-Type Gold(I) Metalloligand with d- and l-Amino Acids: A Coordination Trick.

    Science.gov (United States)

    Itai, Takuma; Kojima, Tatsuhiro; Kuwamura, Naoto; Konno, Takumi

    2017-08-09

    A unique example of a coordination system that creates optically pure crystals from a meso compound with d- and l-amino acids is reported. The 1:1 reaction of a newly prepared meso digold(I) complex, [Au2 (dcpe)(d-Hpen)(l-Hpen)] ([H2 1]), with Co(OAc)2 under aerobic conditions yielded a cationic Au(I)2 Co(III) trinuclear complex, [Au2 Co(dcpe)(d-pen)(l-pen)](+) [2](+) , in which [1](2-) acts as a hexadentate-N2 ,O2 ,S2 metalloligand to a Co(III) center. Similar reactions with M(OAc)2 (M=Ni and Zn) produced analogous but neutral Au(I)2 M(II) complexes, [Au2 M(dcpe)(d-pen)(l-pen)] ([3M ]). Complexes [2](+) and [3M ] are chiral (C vs. A) at the octahedral Co(III) and M(II) centers due to the arrangement of the N2 ,O2 ,S2 donor set. In addition, through spontaneous resolution, [3M ] gave optically pure C-[3M ] and A-[3M ] crystals, showing the creation of homochirality from meso-[1](2-) and achiral M(2+) through crystallization. Such a phenomenon was not observed for [2](+) , which gave a racemic compound containing both C-[2](+) and A-[2](+) . © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Analysis of the pmsCEAB Gene Cluster Involved in Biosynthesis of Salicylic Acid and the Siderophore Pseudomonine in the Biocontrol Strain Pseudomonas fluorescens WCS374

    NARCIS (Netherlands)

    Mercado-Blanco, J.; Drift, K.M.G.M. van der; Olsson, P.E.; Thomas-Oates, J.E.; Loon, L.C. van; Bakker, P.A.H.M.

    2001-01-01

    Mutants of Pseudomonas fluorescens WCS374 defective in biosynthesis of the fluorescent siderophore pseudobactin still display siderophore activity, indicating the production of a second siderophore. A recombinant cosmid clone (pMB374-07) of a WCS374 gene library harboring loci necessary for the bios

  1. Growth of Brassica juncea under chromium stress: influence of siderophores and indole 3 acetic acid producing rhizosphere bacteria.

    Science.gov (United States)

    Rajkumar, M; Lee, Kui Jae; Lee, Wang Hyu; Banu, J Rajesh

    2005-10-01

    Plant growth promoting rhizobacterial (PGPR) strains A3 and S32 have been shown to promote the growth of Brassica juncea under chromium stress which has been related to the microbial production of siderophores and indole 3 acetic acid (IAA). The aim of the present study is to evaluate the importance of siderophores and IAA producing PGPR on the growth of Brassica juncea under chromium stress. The production of IAA and siderophores were observed in the strains A3 and S32, respectively. Both PGPR strains promote the growth of Brassica juncea under chromium stress. The maximum growth was observed in plants inoculated with siderophores producing strain 32. Both the bacterial inoculum did not influence the uptake of chromium by plants. The present observation showed that PGPR isolates A3 and S32 are capable of protecting the plants against the inhibitory effects of chromium by producing the siderophores and IAA.

  2. The role of siderophores in metal homeostasis of members of the genus Burkholderia.

    Science.gov (United States)

    Mathew, Anugraha; Jenul, Christian; Carlier, Aurelien L; Eberl, Leo

    2016-02-01

    Although members of the genus Burkholderia can utilize a high-affinity iron uptake system to sustain growth under iron-limiting conditions, many strains also produce siderophores, suggesting that they may serve alternative functions. Here we demonstrate that the two Burkholderia siderophores pyochelin and ornibactin can protect the cells from metal toxicity and thus play an alternative role in metal homeostasis. We also demonstrate that metals such as copper and zinc induce the production of ornibactin. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  3. Detection of siderophores in endophytic bacteria Methylobacterium spp. associated with Xylella fastidiosa subsp. pauca Detecção de sideróforos nas bactérias endofíticas Methylobacterium spp. associadas com Xylella fastidiosa subsp. pauca

    Directory of Open Access Journals (Sweden)

    Paulo Teixeira Lacava

    2008-04-01

    Full Text Available The objective of this work was to study the production of siderophores by endophytic bacteria Methylobacterium spp., which occupy the same ecological niche as Xylella fastidiosa subsp. pauca (Xfp in citrus plants. The siderophore production of Methylobacterium strains was tested according to chromeazurol agar assay test (CAS, Csáky test (hydroxamate-type and Arnow test (catechol-type. In addition, the ability of Xfp to use siderophores, in vitro, produced by endophytic bacteria as source of iron, was evaluated. All 37 strains of Methylobacterium spp. tested were CAS-positive for siderophore production. Methylobacterium spp. produced hydroxamate-type, but not catechol-type siderophores. In vitro growth of Xfp was stimulated by the presence of supernatant siderophores of endophytic Methylobacterium mesophilicum.O objetivo deste trabalho foi estudar a produção de sideróforos pelas bactérias endofíticas Methylobacterium spp., que ocupam o mesmo nicho ecológico que Xylella fastidiosa subsp. pauca (Xfp, em plantas cítricas. A produção de sideróforos, pelas linhagens de Methylobacterium, foi testada por meio do ensaio de cromoazarol-ágar (chromeazurol agar assay-CAS, teste de Csáky (tipo hidroxamato e do teste de Arnow (tipo catecol. Além disso, a habilidade de Xfp em utilizar sideróforos produzidos por bactérias endofíticas, como fonte de ferro, in vitro, foi avaliada. Todas as 37 linhagens de Methylobacterium spp. testadas foram positivas para a produção de sideróforos, pelo teste CAS-ágar. Methylobacterium spp. foram capazes de produzir sideróforos do tipo hidroxamato, mas não do tipo catecol. O crescimento in vitro de Xfp foi estimulado pela presença de sideróforos no sobrenadante de Methylobacterium mesophilicum endofítica.

  4. Rehabilitation of pure alexia

    DEFF Research Database (Denmark)

    Starrfelt, Randi; Ólafsdóttir, Rannveig Rós; Arendt, Ida-Marie

    2013-01-01

    Acquired reading problems caused by brain injury (alexia) are common, either as a part of an aphasic syndrome, or as an isolated symptom. In pure alexia, reading is impaired while other language functions, including writing, are spared. Being in many ways a simple syndrome, one would think...... that pure alexia was an easy target for rehabilitation efforts. We review the literature on rehabilitation of pure alexia from 1990 to the present, and find that patients differ widely on several dimensions like alexia severity, and associated deficits. Many patients reported to have pure alexia...... in the reviewed studies, have associated deficits like agraphia or aphasia and thus do not strictly conform to the diagnosis. Few studies report clear and generalisable effects of training, none report control data, and in many cases the reported findings are not supported by statistics. We can, however...

  5. Rehabilitation of pure alexia

    DEFF Research Database (Denmark)

    Starrfelt, Randi; Ólafsdóttir, Rannveig Rós; Arendt, Ida-Marie

    2013-01-01

    that pure alexia was an easy target for rehabilitation efforts. We review the literature on rehabilitation of pure alexia from 1990 to the present, and find that patients differ widely on several dimensions like alexia severity, and associated deficits. Many patients reported to have pure alexia......Acquired reading problems caused by brain injury (alexia) are common, either as a part of an aphasic syndrome, or as an isolated symptom. In pure alexia, reading is impaired while other language functions, including writing, are spared. Being in many ways a simple syndrome, one would think...... in the reviewed studies, have associated deficits like agraphia or aphasia and thus do not strictly conform to the diagnosis. Few studies report clear and generalisable effects of training, none report control data, and in many cases the reported findings are not supported by statistics. We can, however...

  6. Efflux Transporter of Siderophore Staphyloferrin A in Staphylococcus aureus Contributes to Bacterial Fitness in Abscesses and Epithelial Cells.

    Science.gov (United States)

    Nakaminami, Hidemasa; Chen, Chunhui; Truong-Bolduc, Que Chi; Kim, Eu Suk; Wang, Yin; Hooper, David C

    2017-08-01

    The siderophores staphyloferrin A (SA) and staphyloferrin B (SB) of Staphylococcus aureus are essential for iron acquisition in the iron-restricted environment of the host, such as in subcutaneous abscesses. SA and SB are secreted by SfaA and SbnD transporters, respectively. To assess the further function of SfaA and SbnD in S. aureus fitness, we tested its effect on murine abscess models and intracellular replication in epithelial cells. Bacterial fitness in abscesses and in epithelial cells was studied, by comparing the parental strains RN6390 and MW2 and their ΔsfaA and ΔsbnD mutants using competition assays in a murine abscess model and invasion and replication assays with human lung adenocarcinoma cell line A549. In the murine abscess model using equal inocula of a ΔsfaA or ΔsbnD mutant and the wild-type RN6390 strain, the ΔsfaA mutant exhibited growth defects of 2.2-fold. Additionally, replication of the ΔsfaA mutant within A549 cells was decreased 3.0-fold. In complementation experiments, the ΔsfaA mutant carrying plasmid-borne sfaA restored the growth fitness in abscesses and epithelial cells. The ΔsbnD mutant, in contrast, showed no growth defect in either abscesses or epithelial cells. Our findings demonstrate that the efflux transporter of the siderophore SA contributes to the ability of S. aureus to replicate in abscesses and epithelial cells. Furthermore, fitness of S. aureus in these sites of replication is not compromised by the absence of transporter SbnD. Copyright © 2017 American Society for Microbiology.

  7. TonB-dependent outer-membrane proteins and siderophore utilization in Pseudomonas fluorescens Pf-5.

    Science.gov (United States)

    Hartney, Sierra L; Mazurier, Sylvie; Kidarsa, Teresa A; Quecine, Maria Carolina; Lemanceau, Philippe; Loper, Joyce E

    2011-04-01

    The soil bacterium Pseudomonas fluorescens Pf-5 produces two siderophores, a pyoverdine and enantio-pyochelin, and its proteome includes 45 TonB-dependent outer-membrane proteins, which commonly function in uptake of siderophores and other substrates from the environment. The 45 proteins share the conserved β-barrel and plug domains of TonB-dependent proteins but only 18 of them have an N-terminal signaling domain characteristic of TonB-dependent transducers (TBDTs), which participate in cell-surface signaling systems. Phylogenetic analyses of the 18 TBDTs and 27 TonB-dependent receptors (TBDRs), which lack the N-terminal signaling domain, suggest a complex evolutionary history including horizontal transfer among different microbial lineages. Putative functions were assigned to certain TBDRs and TBDTs in clades including well-characterized orthologs from other Pseudomonas spp. A mutant of Pf-5 with deletions in pyoverdine and enantio-pyochelin biosynthesis genes was constructed and characterized for iron-limited growth and utilization of a spectrum of siderophores. The mutant could utilize as iron sources a large number of pyoverdines with diverse structures as well as ferric citrate, heme, and the siderophores ferrichrome, ferrioxamine B, enterobactin, and aerobactin. The diversity and complexity of the TBDTs and TBDRs with roles in iron uptake clearly indicate the importance of iron in the fitness and survival of Pf-5 in the environment.

  8. Dissolution mechanisms of goethite in the presence of siderophores and organic acids

    Science.gov (United States)

    Reichard, P. U.; Kretzschmar, R.; Kraemer, S. M.

    2007-12-01

    In dynamic natural systems such as soils and surface waters, transient biogeochemical processes can induce strong chemical non-steady-state conditions. In this paper, we investigate the effects of non-steady-state conditions on ligand-controlled iron oxide dissolution. The rates of goethite dissolution at pH 6 in the presence of low molecular weight organic acids (oxalate, citrate or malonate) were observed. Non-steady-state conditions were induced by rapid additions of fungal, bacterial or plant siderophores. In the presence of the low molecular weight organic acids, dissolved iron concentrations are below detection limit as predicted by equilibrium solubility calculations. The rapid addition of the siderophores triggered reproducible, fast dissolution of kinetically labile iron from the iron oxide surface. The same effect was observed upon rapid additions of high citrate concentrations to goethite-oxalate suspensions. The concentration of the labile iron pool at the mineral surface was a function of the surface concentration of the low molecular weight organic acids and of the reaction time before addition of the siderophores. Isotopic exchange with 59Fe independently confirmed the existence of the labile iron pool before addition of the siderophore. A dissolution mechanism was elucidated that is consistent with these observations and with accepted models of ligand-controlled dissolution. We conclude that the fast dissolution reaction observed here is an important process in biological iron acquisition and that it is based on a general geochemical mechanism.

  9. Characterization of rhizobacteria associated to maize crop in IAA, siderophores and salicylic acid metabolite production

    Directory of Open Access Journals (Sweden)

    Hernández Annia

    2004-07-01

    Full Text Available It has been demonstrated that rhizobacteria are able to produce metabolites having agricultural interest, including salicylic acid, the siderophores and phytohormones. Indol acetic acid (IAA is the most well-known and studied auxin, playing a governing role in culture growth. The object of this work was to characterise rhizobacteria associated with the maize crop in terms of producing IAA, siderophores and salicylic acid metabolites. Burkholderia cepacia and Pseudomonas fluorescens strains previously isolated from maize Francisco variety rhizosphere were used. Colorimetric and chromatographic techniques for detecting these metabolites were studied; multi-variable analysis of hierarchic conglomerate and complete ligament were used for selecting the best strains for producing metabolites of interest. These results demonstrated that all rhizobacteria strains studied produced IAA, siderophores and salicylic acid metabolites. Burkholderia cepacia MBf21, MBp1, MBp2, MBf22, MBp3, MBf20, MBf 15 and Pseudomonas fluorescens MPp4strains have presented the greatest production of these metabolites, showing that these strains could be used in promoting vegetal growth in economically important cultures. Key words: Pseudomonas fluorescens, Burkholderia cepacia, IAA, siderophore, salicylic acid.

  10. The influence of substrate on siderophore production by fish spoilage bacteria

    DEFF Research Database (Denmark)

    Gram, Lone

    1996-01-01

    Siderophore production of fish spoilage bacteria (5 isolates of Shewanella putrefaciens and 5 of Pseudomonas sp.) was determined in fish extract, Tris-succinate medium, a liquid medium of the Chrome-Azurol-S (CAS) agar and in M9 medium supplemented with glucose and casamino acids (M9GC). One Pseu...

  11. Highly toxinogenic but avirulent Park-Williams 8 strain of Corynebacterium diphtheriae does not produce siderophore.

    OpenAIRE

    Russell, L. M.; Holmes, R K

    1985-01-01

    The highly toxinogenic Park-Williams 8 strain of Corynebacterium diphtheriae grows slowly in vitro and is avirulent. C. diphtheriae Park-Williams 8 is defective in iron uptake and does not produce the corynebacterial siderophore corynebactin. Addition of partially purified corynebactin stimulated iron uptake and growth of iron-deprived C. diphtheriae Park-Williams 8 cells.

  12. Interspecies modulation of bacterial development through iron competition and siderophore piracy.

    Science.gov (United States)

    Traxler, Matthew F; Seyedsayamdost, Mohammad R; Clardy, Jon; Kolter, Roberto

    2012-11-01

    While soil-dwelling actinomycetes are renowned for secreting natural products, little is known about the roles of these molecules in mediating actinomycete interactions. In a previous co-culture screen, we found that one actinomycete, Amycolatopsis sp. AA4, inhibited aerial hyphae formation in adjacent colonies of Streptomyces coelicolor. A siderophore, amychelin, mediated this developmental arrest. Here we present genetic evidence that confirms the role of the amc locus in the production of amychelin and in the inhibition of S. coelicolor development. We further characterize the Amycolatopsis sp. AA4 - S. coelicolor interaction by examining expression of developmental and iron acquisition genes over time in co-culture. Manipulation of iron availability and/or growth near Amycolatopsis sp. AA4 led to alterations in expression of the critical developmental gene bldN, and other key downstream genes in the S. coelicolor transcriptional cascade. In Amycolatopsis sp. AA4, siderophore genes were downregulated when grown near S. coelicolor, leading us to find that deferrioxamine E, produced by S. coelicolor, could be readily utilized by Amycolatopsis sp. AA4. Collectively these results suggest that competition for iron via siderophore piracy and species-specific siderophores can alter patterns of gene expression and morphological differentiation during actinomycete interactions.

  13. Effect of efficient supply of pure O{sub 2} concentrated by PSA-type O{sub 2} separator on improvement of indoor air quality

    Energy Technology Data Exchange (ETDEWEB)

    Han, Gi Bo; Jang, Jung Hee; Choi, Changsik [Institute for Advanced Engineering, Yongin (Korea, Republic of); Lee, Tae Jin [School of Chemical Engineering Yeungnam University, Gyeongsan (Korea, Republic of)

    2016-04-15

    To minimize the cost and loss rate of energy artificial room ventilation system, the O{sub 2} separator was suggested for the flow of the excessive ventilation amount between indoor and outdoor because the pure O{sub 2} separated and concentrated by the O{sub 2} separator can be supplied with the ventilation amount minimized. How the O{sub 2} separator applies to ventilation and its operation characteristics were investigated by controlling under various conditions as well as the operation conditions optimized required for indoor air quality such as the concentration of CO{sub 2} and O{sub 2}. Consequently, it was known that the O{sub 2} concentration was increased; however, the increase of the CO{sub 2} concentration was suppressed by the sufficient supply of O{sub 2} concentrated from the storage tank into the room despite the two persons’ breathing in the room having an inner volume of about 56m{sup 3}. Consequently, it was concluded that the supply system of the concentrated O{sub 2} which was stored into the tank after the production with the O{sub 2} separator can be applied to the room ventilation system for the improvement of the indoor air quality.

  14. Siderophore production by Pseudomonas aeruginosa FP6, a biocontrol strain for Rhizoctonia solani and Colletotrichum gloeosporioides causing diseases in chilli

    Directory of Open Access Journals (Sweden)

    Bakthavatchalu Sasirekha

    2016-07-01

    Full Text Available Siderophores are compounds secreted under low iron stress, which act as specific ferric iron chelating agents. Owing to their potential in the biological control of fungal phytopathogens, they may be used as an alternative strategy to chemical control. Pseudomonas aeruginosa FP6, previously isolated from rhizospheric soil samples was screened for its siderophore production on a chrome-azurol S agar plate. Change in the colour of the chrome-azurol S agar from blue to orange red confirmed the siderophore producing ability of P. aeruginosa FP6. The effects of various physicochemical parameters on siderophore production were studied. The maximum siderophore production was obtained in succinate medium (125 μM followed by King's B medium (105 μM. The presence of sucrose and mannitol increased the siderophore production. Yeast extract proved to be the most suitable nitrogen source. Media supplemented with Pb2+, Mn2+ and Mg2+ showed appreciable siderophore production as well as growth of cultures. An increase in the iron concentration favoured growth but substantially reduced siderophore production. The strain when tested for its in-vitro antagonistic activity against Rhizoctonia solani and Colletotrichum gloeosporioides on King's B media, with and without FeCl3, showed a significant reduction in R. solani growth with FeCl3 supplementation compared to the control (without FeCl3, suggesting the role of siderophore mediated antagonism of R. solani. Antifungal activity was not influenced by FeCl3 in the case of C. gloeosporioides, suggesting the presence of other antagonistic mechanisms.

  15. Pure-tone Audiometer

    Science.gov (United States)

    Kapul, A. A.; Zubova, E. I.; Torgaev, S. N.; Drobchik, V. V.

    2017-08-01

    The research focuses on a pure-tone audiometer designing. The relevance of the study is proved by high incidence of an auditory analyser in older people and children. At first, the article provides information about subjective and objective audiometry methods. Secondly, we offer block-diagram and basic-circuit arrangement of device. We decided to base on STM32F407VG microcontroller and use digital pot in the function of attenuator. Third, we implemented microcontroller and PC connection. C programming language is used for microcontroller’s program and PC’s interface. Fourthly, we created the pure-tone audiometer prototype. In the future, we will implement the objective method ASSR in addition to pure-tone audiometry.

  16. Burkholderia pseudomallei known siderophores and hemin uptake are dispensable for lethal murine melioidosis.

    Directory of Open Access Journals (Sweden)

    Brian H Kvitko

    Full Text Available Burkholderia pseudomallei is a mostly saprophytic bacterium, but can infect humans where it causes the difficult-to-manage disease melioidosis. Even with proper diagnosis and prompt therapeutic interventions mortality rates still range from >20% in Northern Australia to over 40% in Thailand. Surprisingly little is yet known about how B. pseudomallei infects, invades and survives within its hosts, and virtually nothing is known about the contribution of critical nutrients such as iron to the bacterium's pathogenesis. It was previously assumed that B. pseudomallei used iron-acquisition systems commonly found in other bacteria, for example siderophores. However, our previous discovery of a clinical isolate carrying a large chromosomal deletion missing the entire malleobactin gene cluster encoding the bacterium's major high-affinity siderophore while still being fully virulent in a murine melioidosis model suggested that other iron-acquisition systems might make contributions to virulence. Here, we deleted the major siderophore malleobactin (mba and pyochelin (pch gene clusters in strain 1710b and revealed a residual siderophore activity which was unrelated to other known Burkholderia siderophores such as cepabactin and cepaciachelin, and not due to increased secretion of chelators such as citrate. Deletion of the two hemin uptake loci, hmu and hem, showed that Hmu is required for utilization of hemin and hemoglobin and that Hem cannot complement a Hmu deficiency. Prolonged incubation of a hmu hem mutant in hemoglobin-containing minimal medium yielded variants able to utilize hemoglobin and hemin suggesting alternate pathways for utilization of these two host iron sources. Lactoferrin utilization was dependent on malleobactin, but not pyochelin synthesis and/or uptake. A mba pch hmu hem quadruple mutant could use ferritin as an iron source and upon intranasal infection was lethal in an acute murine melioidosis model. These data suggest that B

  17. Tn5 insertion in the tonB gene promoter affects iron-related phenotypes and increases extracellular siderophore levels in Gluconacetobacter diazotrophicus.

    Science.gov (United States)

    de Paula Soares, Cleiton; Rodrigues, Elisete Pains; de Paula Ferreira, Jéssica; Simões Araújo, Jean Luiz; Rouws, Luc Felicianus Marie; Baldani, José Ivo; Vidal, Marcia Soares

    2015-03-01

    TonB-dependent receptors in concert with the TonB-ExbB-ExbD protein complex are responsible for the uptake of iron and substances such as vitamin B12 in several bacterial species. In this study, Tn5 mutagenesis of the sugarcane endophytic bacterium Gluconacetobacter diazotrophicus led to the isolation of a mutant with a single Tn5-insertion in the promoter region of a tonB gene ortholog. This mutant, named Gdiaa31, displayed a reduced growth rate and a lack of response to iron availability when compared to the wild-type strain PAL5(T). Several efforts to generate null-mutants for the tonB gene by insertional mutagenesis were without success. RT-qPCR analysis demonstrated reduced transcription of tonB in Gdiaa31 when compared to PAL5(T). tonB transcription was inhibited in the presence of Fe(3+) ions both in PAL5(T) and in Gdiaa31. In comparison with PAL5(T), Gdiaa31 also demonstrated decreased nitrogenase activity and biofilm formation capability, two iron-requiring physiological characteristics of G. diazotrophicus. Additionally, Gdiaa31 accumulated higher siderophore levels in culture supernatant. The genetic complementation of the Gdiaa31 strain with a plasmid that carried the tonB gene including its putative promoter region (pP(tonB)) restored nitrogenase activity and siderophore accumulation phenotypes. These results indicate that the TonB complex has a role in iron/siderophore transport and may be essential in the physiology of G. diazotrophicus.

  18. Mn(II)/Mn(III) and Fe(III) binding capability of two Aspergillus fumigatus siderophores, desferricrocin and N', N″, N‴-triacetylfusarinine C.

    Science.gov (United States)

    Farkas, Etelka; Szabó, Orsolya; Parajdi-Losonczi, Péter L; Balla, György; Pócsi, István

    2014-10-01

    Manganese(II) and manganese(III) complexes of the exocyclic desferricrocin (H3DFCR) and endocyclic triacetylfusarinine C (H3TAF) in solution have been studied by using pH-potentiometry, UV-Vis spectrophotometry, relaxometry and cyclic voltammetry. A comparison between the present results and the corresponding ones for the open-chain analogues, desferrioxamine B (DFB) and desferricoprogen (DFC), shows (i) The dissociation processes of H3DFCR occur in the expected pH-range (pH7-10.5), but hydrogen bonding is assumed to be responsible for a quite low proton dissociation constant (pK=4.18) of H3TAF and also an unusually high one (10.59). (ii) Moderate stability complexes with 1:1 Mn(II) to ligand ratio are formed with all four siderophores. (iii) The coordination of the three hydroxamates of a siderophore takes place in stepwise processes, except the case of desferricrocin, with which, large-extent overlapping of the processes occurs. (iv) Out of the four tris-chelated [ML] type complexes, the complex of DFCR is the most compact, as it is indicated by the relaxivity values. (v) Following the stoichiometric oxidation of the Mn(II)-siderophore complexes at pH≥9, tris-chelated Mn(III) complexes are formed. To make a comparison between the stability of the Mn(III) and the corresponding Fe(III) complexes of DFCR and TAF, the determination of the stability of the Fe(III) complexes under our condition has also been performed, by using UV-Vis spectrophotometry. Comparable stability of the corresponding complexes was found. (vi) Correlation study of the stability constants resulted in estimation of the constant of the Mn(III) monohydroxo complex, for which there was no data in the literature under our conditions.

  19. The ssbL gene harbored by the ColV plasmid of an Escherichia coli neonatal meningitis strain is an auxiliary virulence factor boosting the production of siderophores through the shikimate pathway.

    Science.gov (United States)

    Lemaître, Chloé; Bidet, Philippe; Benoist, Jean-François; Schlemmer, Dimitri; Sobral, Elsa; d'Humières, Camille; Bonacorsi, Stéphane

    2014-04-01

    The ability to capture iron is a challenge for most bacteria. The neonatal meningitis Escherichia coli strain S88 possesses several iron uptake systems, notably including siderophores. Transcriptional analysis of the ColV plasmid pS88 has shown strong induction of a previously undescribed gene with low identity to three E. coli chromosomal genes encoding phospho-2-dehydro-3-deoxyheptonate aldolases involved in aromatic amino acid and catecholate/phenolate siderophore biosynthesis through the shikimate pathway. Here, we investigated the role of this gene, ssbLp (ssbL carried on the plasmid), in siderophore biosynthesis and, consequently, in S88 virulence. We constructed an S88 mutant designated S88 ΔssbLp, which exhibited reduced growth under low-iron conditions compared to the wild-type strain. Liquid chromatography-mass spectroscopy analysis of culture supernatants showed that the mutant secreted significantly smaller amounts of enterobactin, salmochelin SX, and yersiniabactin than the wild-type strain. The mutant was also less virulent in a neonatal rat sepsis model, with significantly lower bacteremia and mortality. Supplementation with chorismate, the final product of the shikimate pathway, restored the wild-type phenotype in vitro. In a collection of human extraintestinal E. coli isolates, we found that ssbL was present only in strains harboring the iro locus, encoding salmochelins, and was located either on the chromosome or on plasmids. Acquisition of the iro locus has been accompanied by acquisition of the auxiliary gene ssbL, which boosts the metabolic pathway essential for catecholate/phenolate siderophore biosynthesis and could represent potential therapeutic targets.

  20. Dahlbeck and Pure Ontology

    Science.gov (United States)

    Mackenzie, Jim

    2016-01-01

    This article responds to Johan Dahlbeck's "Towards a pure ontology: Children's bodies and morality" ["Educational Philosophy and Theory," vol. 46 (1), 2014, pp. 8-23 (EJ1026561)]. His arguments from Nietzsche and Spinoza do not carry the weight he supposes, and the conclusions he draws from them about pedagogy would be…

  1. Dahlbeck and Pure Ontology

    Science.gov (United States)

    Mackenzie, Jim

    2016-01-01

    This article responds to Johan Dahlbeck's "Towards a pure ontology: Children's bodies and morality" ["Educational Philosophy and Theory," vol. 46 (1), 2014, pp. 8-23 (EJ1026561)]. His arguments from Nietzsche and Spinoza do not carry the weight he supposes, and the conclusions he draws from them about pedagogy would be…

  2. Bioalteration of synthetic Fe(III)-, Fe(II)-bearing basaltic glasses and Fe-free glass in the presence of the heterotrophic bacteria strain Pseudomonas aeruginosa: Impact of siderophores

    Science.gov (United States)

    Perez, Anne; Rossano, Stéphanie; Trcera, Nicolas; Huguenot, David; Fourdrin, Chloé; Verney-Carron, Aurélie; van Hullebusch, Eric D.; Guyot, François

    2016-09-01

    This study aims to evaluate the role of micro-organisms and their siderophores in the first steps of the alteration processes of basaltic glasses in aqueous media. In this regard, three different types of glasses - with or without iron, in the reduced Fe(II) or oxidized Fe(III) states - were prepared on the basis of a simplified basaltic glass composition. Control and Pseudomonas aeruginosa inoculated experiments were performed in a buffered (pH 6.5) nutrient depleted medium to stimulate the production of the pyoverdine siderophore. Results show that the presence of P. aeruginosa has an effect on the dissolution kinetics of all glasses as most of the calculated elemental release rates are increased compared to sterile conditions. Reciprocally, the composition of the glass in contact with P. aeruginosa has an impact on the bacterial growth and siderophore production. As an essential nutrient for this microbial strain, Fe notably appears to play a central role during biotic experiments. Its presence in the glass stimulates the bacterial growth and minimizes the synthesis of pyoverdine. Moreover the initial Fe2+/Fe3+ ratio in the glasses modulates this synthesis, as pyoverdine is not detected at all in the system in contact with Fe(III)-bearing glass. Finally, the dissolution rates appear to be correlated to siderophore concentrations as they increase with respect to sterile experiments in the order Fe(III)-bearing glass < Fe(II)-bearing glass < Fe-free glass. This increase is attributed to complexation reactions between siderophores and Fe or Al for Fe(II)-bearing glass or Fe-free glass, respectively. The dissolution of an Fe-free glass is significantly improved in the presence of bacteria, as initial dissolution rates are increased by a factor of 3. This study attests to the essential role of siderophores in the P. aeruginosa-promoted dissolution processes of basaltic glasses as well as to the complex relationships between the nutritional potential of the glass and

  3. Entropy product measure for multipartite pure states

    Institute of Scientific and Technical Information of China (English)

    CAO Wancang; LIU Dan; PAN Feng; LONG Guilu

    2006-01-01

    An entanglement measure for multipartite pure states is formulated using the product of the von Neumann entropy of the reduced density matrices of the constituents.Based on this new measure, all possible ways of the maximal entanglement of the triqubit pure states are studied in detail and all types of the maximal entanglement have been culate the degree of entanglement, and an improvement is given in the area near the zero entropy.

  4. Pseudomine, an isoxazolidone with siderophoric activity from Pseudomonas fluorescens AH2 isolated from Lake Victorian Nile Perch

    DEFF Research Database (Denmark)

    Anthoni, U.; Christophersen, C.; Nielsen, P.H.

    1995-01-01

    A siderophore, pseudomonine, and sodium salicylate were isolated from the culture broth of iron-deficient cultures of Pseudomonas fluorescens AH2 isolated from the surface of spoiled Nile Perch from Lake Victoria......A siderophore, pseudomonine, and sodium salicylate were isolated from the culture broth of iron-deficient cultures of Pseudomonas fluorescens AH2 isolated from the surface of spoiled Nile Perch from Lake Victoria...

  5. Purely Functional Structured Programming

    OpenAIRE

    Obua, Steven

    2010-01-01

    The idea of functional programming has played a big role in shaping today's landscape of mainstream programming languages. Another concept that dominates the current programming style is Dijkstra's structured programming. Both concepts have been successfully married, for example in the programming language Scala. This paper proposes how the same can be achieved for structured programming and PURELY functional programming via the notion of LINEAR SCOPE. One advantage of this proposal is that m...

  6. Purely Cortical Anaplastic Ependymoma

    Directory of Open Access Journals (Sweden)

    Flávio Ramalho Romero

    2012-01-01

    Full Text Available Ependymomas are glial tumors derived from ependymal cells lining the ventricles and the central canal of the spinal cord. It may occur outside the ventricular structures, representing the extraventicular form, or without any relationship of ventricular system, called ectopic ependymona. Less than fifteen cases of ectopic ependymomas were reported and less than five were anaplastic. We report a rare case of pure cortical ectopic anaplastic ependymoma.

  7. Purely tetrahedral quadruple systems

    Institute of Scientific and Technical Information of China (English)

    JI Lijun

    2006-01-01

    An oriented tetrahedron is a set of four vertices and four cyclic triples with the property that any ordered pair of vertices is contained in exactly one of the cyclic triples. A tetrahedral quadruple system of order n (briefly TQS(n)) is a pair (X,B), where X is an nelement set and B is a set of oriented tetrahedra such that every cyclic triple on X is contained in a unique member of B. A TQS(n) (X, B) is pure if there do not exist two oriented tetrahedra with the same vertex set. In this paper, we show that there is a pure TQS(n) if and only if n≡2,4(mod 6),n>4,or n≡1,5(mod 12). One corollary is that there is a simple two-fold quadruple system of order n if and only if n≡2,4 (mod 6) and n>4, or n≡1, 5 (mod 12).Another corollary is that there is an overlarge set of pure Mendelsohn triple systems of order n for n≡1,3(mod 6),n>3, or n≡0,4 (mod 12).

  8. Structure and functional analysis of the siderophore periplasmic binding protein from the fuscachelin gene cluster of Thermobifida fusca.

    Science.gov (United States)

    Li, Kunhua; Bruner, Steven D

    2016-01-01

    Iron acquisition is a complex, multicomponent process critical for most organisms' survival and virulence. Small iron chelating molecules, siderophores, mediate transport as key components of common pathways for iron assimilation in many microorganisms. The chemistry and biology of the extraordinary tight and specific metal binding siderophores is of general interest in terms of host/guest chemistry and is a potential target toward the development of therapeutic treatments for microbial virulence. The siderophore pathway of the moderate thermophile, Thermobifida fusca, is an excellent model system to study the process in Gram-positive bacteria. Here we describe the structure and characterization of the siderophore periplasmic binding protein, FscJ from the fuscachelin gene cluster of T. fusca. The structure shows a di-domain arrangement connected with a long α-helix hinge. Several X-ray structures detail ligand-free conformational changes at different pH values, illustrating complex interdomain flexibility of the siderophore receptors. We demonstrated that FscJ has a unique recognition mechanism and details the binding interaction with ferric-fuscachelin A through ITC and docking analysis. The presented work provides a structural basis for the complex molecular mechanisms of siderophore recognition and transportation.

  9. Adsorption of hydroxamate siderophores and EDTA on goethite in the presence of the surfactant sodium dodecyl sulfate

    Directory of Open Access Journals (Sweden)

    Xu Jide

    2009-06-01

    Full Text Available Abstract Siderophore-promoted iron acquisition by microorganisms usually occurs in the presence of other organic molecules, including biosurfactants. We have investigated the influence of the anionic surfactant sodium dodecyl sulfate (SDS on the adsorption of the siderophores DFOB (cationic and DFOD (neutral and the ligand EDTA (anionic onto goethite (α-FeOOH at pH 6. We also studied the adsorption of the corresponding 1:1 Fe(III-ligand complexes, which are products of the dissolution process. Adsorption of the two free siderophores increased in a similar fashion with increasing SDS concentration, despite their difference in molecule charge. In contrast, SDS had little effect on the adsorption of EDTA. Adsorption of the Fe-DFOB and Fe-DFOD complexes also increased with increasing SDS concentrations, while adsorption of Fe-EDTA decreased. Our results suggest that hydrophobic interactions between adsorbed surfactants and siderophores are more important than electrostatic interactions. However, for strongly hydrophilic molecules, such as EDTA and its iron complex, the influence of SDS on their adsorption seems to depend on their tendency to form inner-sphere or outer-sphere surface complexes. Our results demonstrate that surfactants have a strong influence on the adsorption of siderophores to Fe oxides, which has important implications for siderophore-promoted dissolution of iron oxides and biological iron acquisition.

  10. Deciphering Protein Dynamics of the Siderophore Pyoverdine Pathway in Pseudomonas aeruginosa

    Science.gov (United States)

    Guillon, Laurent; Altenburger, Stephan; Graumann, Peter L.; Schalk, Isabelle J.

    2013-01-01

    Pseudomonas aeruginosa produces the siderophore, pyoverdine (PVD), to obtain iron. Siderophore pathways involve complex mechanisms, and the machineries responsible for biosynthesis, secretion and uptake of the ferri-siderophore span both membranes of Gram-negative bacteria. Most proteins involved in the PVD pathway have been identified and characterized but the way the system functions as a whole remains unknown. By generating strains expressing fluorescent fusion proteins, we show that most of the proteins are homogeneously distributed throughout the bacterial cell. We also studied the dynamics of these proteins using fluorescence recovery after photobleaching (FRAP). This led to the first diffusion coefficients ever determined in P. aeruginosa. Cytoplasmic and periplamic diffusion appeared to be slower than in Escherichia coli but membrane proteins seemed to behave similarly in the two species. The diffusion of cytoplasmic and periplasmic tagged proteins involved in the PVD pathway was dependent on the interaction network to which they belong. Importantly, the TonB protein, motor of the PVD-Fe uptake process, was mostly immobile but its mobility increased substantially in the presence of PVD-Fe. PMID:24205369

  11. Deciphering protein dynamics of the siderophore pyoverdine pathway in Pseudomonas aeruginosa.

    Directory of Open Access Journals (Sweden)

    Laurent Guillon

    Full Text Available Pseudomonas aeruginosa produces the siderophore, pyoverdine (PVD, to obtain iron. Siderophore pathways involve complex mechanisms, and the machineries responsible for biosynthesis, secretion and uptake of the ferri-siderophore span both membranes of Gram-negative bacteria. Most proteins involved in the PVD pathway have been identified and characterized but the way the system functions as a whole remains unknown. By generating strains expressing fluorescent fusion proteins, we show that most of the proteins are homogeneously distributed throughout the bacterial cell. We also studied the dynamics of these proteins using fluorescence recovery after photobleaching (FRAP. This led to the first diffusion coefficients ever determined in P. aeruginosa. Cytoplasmic and periplamic diffusion appeared to be slower than in Escherichia coli but membrane proteins seemed to behave similarly in the two species. The diffusion of cytoplasmic and periplasmic tagged proteins involved in the PVD pathway was dependent on the interaction network to which they belong. Importantly, the TonB protein, motor of the PVD-Fe uptake process, was mostly immobile but its mobility increased substantially in the presence of PVD-Fe.

  12. Siderophores as drug delivery agents: application of the "Trojan Horse" strategy.

    Science.gov (United States)

    Möllmann, Ute; Heinisch, Lothar; Bauernfeind, Adolf; Köhler, Thilo; Ankel-Fuchs, Dorothe

    2009-08-01

    The outer membrane permeability barrier is an important resistance factor of bacterial pathogens. In combination with drug inactivating enzymes, target alteration and efflux, it can increase resistance dramatically. A strategy to overcome this membrane-mediated resistance is the misuse of bacterial transport systems. Most promising are those for iron transport. They are vital for virulence and survival of bacteria in the infected host, where iron depletion is a defense mechanism against invading pathogens. We synthesized biomimetic siderophores as shuttle vectors for active transport of antibiotics through the bacterial membrane. Structure activity relationship studies resulted in siderophore aminopenicillin conjugates that were highly active against Gram-negative pathogens which play a crucial role in destructive lung infections in cystic fibrosis patients and in severe nosocomial infections. The mechanism of action and the uptake of the compounds via specific iron siderophore transport routes were demonstrated. The novel conjugates were active against systemic Pseudomonas aeruginosa infections in mice with ED(50) values comparable to the quinolone ofloxacin and show low toxicity.

  13. PURE DRIVE GT

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    在2004年奥林匹克赛事中,中国的李婷,孙甜甜取得了中国网球第一个金牌一女子双打冠军。忘记不了当时李婷挥动着她的BABOLAT(百保力)网拍Pure Drive Zylon 360°激动地拥抱着孙甜甜吵闹着,幸福地哭着的情景。

  14. Pure de Sitter Supergravity

    CERN Document Server

    Bergshoeff, Eric A; Kallosh, Renata; Van Proeyen, Antoine

    2015-01-01

    Using superconformal methods we derive an explicit de Sitter supergravity action invariant under spontaneously broken local ${\\cal N}=1$ supersymmetry. The supergravity multiplet interacts with a nilpotent goldstino multiplet. We present a complete locally supersymmetric action including the graviton and the fermionic fields, gravitino and goldstino, no scalars. In the global limit when supergravity multiplet decouples, our action reproduces the Volkov-Akulov theory. In the unitary gauge where goldstino vanishes we recover pure supergravity with the positive cosmological constant. The classical equations of motion, with all fermions vanishing, have a maximally symmetric solution: de Sitter space.

  15. Isolation and characterization of Bacillus subtilis genes involved in siderophore biosynthesis: relationship between B. subtilis sfpo and Escherichia coli entD genes.

    OpenAIRE

    Grossman, T H; Tuckman, M; Ellestad, S; Osburne, M S

    1993-01-01

    In response to iron deprivation, Bacillus subtilis secretes a catecholic siderophore, 2,3-dihydroxybenzoyl glycine, which is similar to the precursor of the Escherichia coli siderophore enterobactin. We isolated two sets of B. subtilis DNA sequences that complemented the mutations of several E. coli siderophore-deficient (ent) mutants with defective enterobactin biosynthesis enzymes. One set contained DNA sequences that complemented only an entD mutation. The second set contained DNA sequence...

  16. Non-nucleoside Inhibitors of BasE, An Adenylating Enzyme in the Siderophore Biosynthetic Pathway of the Opportunistic Pathogen Acinetobacter baumannii

    OpenAIRE

    Neres, João; Engelhart, Curtis A.; Drake, Eric J.; Daniel J Wilson; Fu, Peng; Boshoff, Helena I.; Barry, Clifton E.; Gulick, Andrew M.; Aldrich, Courtney C.

    2013-01-01

    Siderophores are small-molecule iron chelators produced by bacteria and other microorganisms for survival under iron limiting conditions, such as found in a mammalian host. Siderophore biosynthesis is essential for the virulence of many important Gram-negative pathogens including Acinetobacter baumannii, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Escherichia coli. We performed high-throughput screening of against BasE, which is involved in siderophore biosynthesis in A. baumannii and ...

  17. Turnerbactin, a novel triscatecholate siderophore from the shipworm endosymbiont Teredinibacter turnerae T7901.

    Directory of Open Access Journals (Sweden)

    Andrew W Han

    Full Text Available Shipworms are marine bivalve mollusks (Family Teredinidae that use wood for shelter and food. They harbor a group of closely related, yet phylogenetically distinct, bacterial endosymbionts in bacteriocytes located in the gills. This endosymbiotic community is believed to support the host's nutrition in multiple ways, through the production of cellulolytic enzymes and the fixation of nitrogen. The genome of the shipworm endosymbiont Teredinibacter turnerae T7901 was recently sequenced and in addition to the potential for cellulolytic enzymes and diazotrophy, the genome also revealed a rich potential for secondary metabolites. With nine distinct biosynthetic gene clusters, nearly 7% of the genome is dedicated to secondary metabolites. Bioinformatic analyses predict that one of the gene clusters is responsible for the production of a catecholate siderophore. Here we describe this gene cluster in detail and present the siderophore product from this cluster. Genes similar to the entCEBA genes of enterobactin biosynthesis involved in the production and activation of dihydroxybenzoic acid (DHB are present in this cluster, as well as a two-module non-ribosomal peptide synthetase (NRPS. A novel triscatecholate siderophore, turnerbactin, was isolated from the supernatant of iron-limited T. turnerae T7901 cultures. Turnerbactin is a trimer of N-(2,3-DHB-L-Orn-L-Ser with the three monomeric units linked by Ser ester linkages. A monomer, dimer, dehydrated dimer, and dehydrated trimer of 2,3-DHB-L-Orn-L-Ser were also found in the supernatant. A link between the gene cluster and siderophore product was made by constructing a NRPS mutant, TtAH03. Siderophores could not be detected in cultures of TtAH03 by HPLC analysis and Fe-binding activity of culture supernatant was significantly reduced. Regulation of the pathway by iron is supported by identification of putative Fur box sequences and observation of increased Fe-binding activity under iron restriction

  18. The role of the FRE family of plasma membrane reductases in the uptake of siderophore-iron in Saccharomyces cerevisiae.

    Science.gov (United States)

    Yun, C W; Bauler, M; Moore, R E; Klebba, P E; Philpott, C C

    2001-03-30

    Saccharomyces cerevisiae takes up siderophore-bound iron through two distinct systems, one that requires siderophore transporters of the ARN family and one that requires the high affinity ferrous iron transporter on the plasma membrane. Uptake through the plasma membrane ferrous iron transporter requires that the iron first must dissociate from the siderophore and undergo reduction to the ferrous form. FRE1 and FRE2 encode cell surface metalloreductases that are required for reduction and uptake of free ferric iron. The yeast genome contains five additional FRE1 and FRE2 homologues, four of which are regulated by iron and the major iron-dependent transcription factor, Aft1p, but whose function remains unknown. Fre3p was required for the reduction and uptake of ferrioxamine B-iron and for growth on ferrioxamine B, ferrichrome, triacetylfusarinine C, and rhodotorulic acid in the absence of Fre1p and Fre2p. By indirect immunofluorescence, Fre3p was expressed on the plasma membrane in a pattern similar to that of Fet3p, a component of the high affinity ferrous transporter. Enterobactin, a catecholate siderophore, was not a substrate for Fre3p, and reductive uptake required either Fre1p or Fre2p. Fre4p could facilitate utilization of rhodotorulic acid-iron when the siderophore was present in higher concentrations. We propose that Fre3p and Fre4p are siderophore-iron reductases and that the apparent redundancy of the FRE genes confers the capacity to utilize iron from a variety of siderophore sources.

  19. Pure laparoscopic augmentation ileocystoplasty.

    Science.gov (United States)

    Rebouças, Rafael B; Monteiro, Rodrigo C; Souza, Thiago N S de; Aragão, Augusto J de; Burity, Camila R T; Nóbrega, Júlio C de A; Oliveira, Natália S C de; Abrantes, Ramon B; Dantas Júnior, Luiz B; Cartaxo Filho, Ricardo; Negromonte, Gustavo R P; Sampaio, Rafael da C R; Britto, Cesar A

    2014-01-01

    Guillain-Barre syndrome is an acute neuropathy that rarely compromises bladder function. Conservative management including clean intermittent catheterization and pharmacotherapy is the primary approach for hypocompliant contracted bladder. Surgical treatment may be used in refractory cases to improve bladder compliance and capacity in order to protect the upper urinary tract. We describe a case of pure laparoscopic augmentation ileocystoplasty in a patient affected by Guillain-Barre syndrome. A 15-year-old female, complaining of voiding dysfunction, recurrent urinary tract infection and worsening renal function for three months. A previous history of Guillain-Barre syndrome on childhood was related. A voiding cystourethrography showed a pine-cone bladder with moderate post-void residual urine. The urodynamic demonstrated a hypocompliant bladder and small bladder capacity (190 mL) with high detrusor pressure (54 cmH2O). Nonsurgical treatments were attempted, however unsuccessfully.

  20. Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.

    Science.gov (United States)

    Cruz-Morales, Pablo; Ramos-Aboites, Hilda E; Licona-Cassani, Cuauhtémoc; Selem-Mójica, Nelly; Mejía-Ponce, Paulina M; Souza-Saldívar, Valeria; Barona-Gómez, Francisco

    2017-09-01

    Desferrioxamines are hydroxamate siderophores widely conserved in both aquatic and soil-dwelling Actinobacteria. While the genetic and enzymatic bases of siderophore biosynthesis and their transport in model families of this phylum are well understood, evolutionary studies are lacking. Here, we perform a comprehensive desferrioxamine-centric (des genes) phylogenomic analysis, which includes the genomes of six novel strains isolated from an iron and phosphorous depleted oasis in the Chihuahuan desert of Mexico. Our analyses reveal previously unnoticed desferrioxamine evolutionary patterns, involving both biosynthetic and transport genes, likely to be related to desferrioxamines chemical diversity. The identified patterns were used to postulate experimentally testable hypotheses after phenotypic characterization, including profiling of siderophores production and growth stimulation of co-cultures under iron deficiency. Based in our results, we propose a novel des gene, which we term desG, as responsible for incorporation of phenylacetyl moieties during biosynthesis of previously reported arylated desferrioxamines. Moreover, a genomic-based classification of the siderophore-binding proteins responsible for specific and generalist siderophore assimilation is postulated. This report provides a much-needed evolutionary framework, with specific insights supported by experimental data, to direct the future ecological and functional analysis of desferrioxamines in the environment. © FEMS 2017.

  1. Structural anatomy of pure and hemianopic alexia.

    Science.gov (United States)

    Leff, A P; Spitsyna, G; Plant, G T; Wise, R J S

    2006-09-01

    The two most common types of acquired reading disorder resulting from damage to the territory of the dominant posterior cerebral artery are hemianopic and pure alexia. Patients with pronounced hemianopic alexia have a right homonymous hemianopia that encroaches into central or parafoveal vision; they read individual words well, but generate inefficient reading saccades when reading along a line of text. Patients with pure alexia also often have a hemianopia but are more disabled, making frequent errors on individual words; they have sustained damage to a brain region that supports efficient word identification. To investigate the differences in lesion site between hemianopic alexia and pure alexia groups, as rehabilitative techniques differ between the two conditions. High-resolution magnetic resonance images were obtained from seven patients with hemianopic alexia and from six patients with pure alexia caused by a left occipital stroke. The boundary of each lesion was defined and lesion volumes were then transformed into a standard stereotactic space so that regional comparisons could be made. The two patient groups did not differ in terms of damage to the medial left occipital lobe, but those with pure alexia had additional lateral damage to the posterior fusiform gyrus and adjacent tissue. Clinicians will be able to predict the type of reading disorder patients with left occipital lesions have from simple tests of reading speed and the distribution of damage to the left occipital lobe on brain imaging. This information will aid management decisions, including recommendations for reading rehabilitation.

  2. Pure Laparoscopic Augmentation Ileocystoplasty

    Directory of Open Access Journals (Sweden)

    Rafael B. Rebouças

    2014-12-01

    Full Text Available Introduction Guillain-Barre syndrome is an acute neuropathy that rarely compromises bladder function. Conservative management including clean intermittent catheterization and pharmacotherapy is the primary approach for hypocompliant contracted bladder. Surgical treatment may be used in refractory cases to improve bladder compliance and capacity in order to protect the upper urinary tract. We describe a case of pure laparoscopic augmentation ileocystoplasty in a patient affected by Guillain-Barre syndrome. Presentation A 15-year-old female, complaining of voiding dysfunction, recurrent urinary tract infection and worsening renal function for three months. A previous history of Guillain-Barre syndrome on childhood was related. A voiding cystourethrography showed a pine-cone bladder with moderate post-void residual urine. The urodynamic demonstrated a hypocompliant bladder and small bladder capacity (190mL with high detrusor pressure (54 cmH2O. Nonsurgical treatments were attempted, however unsuccessfully. The patient was placed in the exaggerated Trendelenburg position. A four-port transperitoneal technique was used. A segment of ileum approximately 15-20cm was selected and divided with its pedicle. The ileal anastomosis and creation of ileal U-shaped plate were performed laparoscopically, without staplers. Bladder mobilization and longidutinal cystotomy were performed. Enterovesical anastomosis was done with continuous running suture. A suprapubic cystostomy was placed through a 5mm trocar. Results The total operative time was 335 min. The blood loss was minimal. The patient developed ileus in the early days, diet acceptance after the fourth day and was discharged on the seventh postoperative day. The urethral catheter was removed after 2 weeks. At 6-month follow-up, a cystogram showed a significant improvement in bladder capacity. The patient adhered well to clean intermittent self-catheterization and there was no report for febrile infections

  3. A modeling and simulation study of siderophore mediated antagonism in dual-species biofilms

    Directory of Open Access Journals (Sweden)

    Collinson Shannon

    2009-12-01

    Full Text Available Abstract Background Several bacterial species possess chelation mechanisms that allow them to scavenge iron from the environment under conditions of limitation. To this end they produce siderophores that bind the iron and make it available to the cells later on, while rendering it unavailable to other organisms. The phenomenon of siderophore mediated antagonism has been studied to some extent for suspended populations where it was found that the chelation ability provides a growth advantage over species that do not have this possibility. However, most bacteria live in biofilm communities. In particular Pseudomonas fluorescens and Pseudomonas putida, the species that have been used in most experimental studies of the phenomenon, are known to be prolific biofilm formers, but only very few experimental studies of iron chelation have been published to date for the biofilm setting. We address this question in the present study. Methods Based on a previously introduced model of iron chelation and an existing model of biofilm growth we formulate a model for iron chelation and competition in dual species biofilms. This leads to a highly nonlinear system of partial differential equations which is studied in computer simulation experiments. Conclusions (i Siderophore production can give a growth advantage also in the biofilm setting, (ii diffusion facilitates and emphasizes this growth advantage, (iii the magnitude of the growth advantage can also depend on the initial inoculation of the substratum, (iv a new mass transfer boundary condition was derived that allows to a priori control the expect the expected average thickness of the biofilm in terms of the model parameters.

  4. Evolutionary dynamics of interlinked public goods traits: an experimental study of siderophore production in Pseudomonas aeruginosa.

    Science.gov (United States)

    Ross-Gillespie, A; Dumas, Z; Kümmerli, R

    2015-01-01

    Public goods cooperation is common in microbes, and there is much interest in understanding how such traits evolve. Research in recent years has identified several important factors that shape the evolutionary dynamics of such systems, yet few studies have investigated scenarios involving interactions between multiple public goods. Here, we offer general predictions about the evolutionary trajectories of two public goods traits having positive, negative or neutral regulatory influence on one another's expression, and we report on a test of some of our predictions in the context of Pseudomonas aeruginosa's production of two interlinked iron-scavenging siderophores. First, we confirmed that both pyoverdine and pyochelin siderophores do operate as public goods under appropriate environmental conditions. We then tracked their production in lines experimentally evolved under different iron-limitation regimes known to favour different siderophore expression profiles. Under strong iron limitation, where pyoverdine represses pyochelin, we saw a decline in pyoverdine and a concomitant increase in pyochelin - consistent with expansion of pyoverdine-defective cheats derepressed for pyochelin. Under moderate iron limitation, pyochelin declined - again consistent with an expected cheat invasion scenario - but there was no concomitant shift in pyoverdine because cross-suppression between the traits is unidirectional only. Alternating exposure to strong and moderate iron limitation caused qualitatively similar though lesser shifts compared to the constant-environment regimes. Our results confirm that the regulatory interconnections between public goods traits can significantly modulate the course of evolution, yet also suggest how we can start to predict the impacts such complexities will have on phenotypic divergence and community stability.

  5. Minimal covariant observables identifying all pure states

    Energy Technology Data Exchange (ETDEWEB)

    Carmeli, Claudio, E-mail: claudio.carmeli@gmail.com [D.I.M.E., Università di Genova, Via Cadorna 2, I-17100 Savona (Italy); I.N.F.N., Sezione di Genova, Via Dodecaneso 33, I-16146 Genova (Italy); Heinosaari, Teiko, E-mail: teiko.heinosaari@utu.fi [Turku Centre for Quantum Physics, Department of Physics and Astronomy, University of Turku (Finland); Toigo, Alessandro, E-mail: alessandro.toigo@polimi.it [Dipartimento di Matematica, Politecnico di Milano, Piazza Leonardo da Vinci 32, I-20133 Milano (Italy); I.N.F.N., Sezione di Milano, Via Celoria 16, I-20133 Milano (Italy)

    2013-09-02

    It has been recently shown by Heinosaari, Mazzarella and Wolf (2013) [1] that an observable that identifies all pure states of a d-dimensional quantum system has minimally 4d−4 outcomes or slightly less (the exact number depending on d). However, no simple construction of this type of minimal observable is known. We investigate covariant observables that identify all pure states and have minimal number of outcomes. It is shown that the existence of this kind of observables depends on the dimension of the Hilbert space.

  6. Pathogenicity of Vibrio anguillarum serogroup O1 strains compared to plasmids, outer membrane protein profiles and siderophore production

    DEFF Research Database (Denmark)

    Pedersen, K.; Gram, Lone; Austin, D.A.;

    1997-01-01

    The virulence of 18 strains of Vibrio anguillarum serogroup 01 was compared to plasmid content, expression of siderophores and outer membrane proteins. All strains, irrespective of plasmid content, produced siderophores and inducible outer membrane proteins under iron-limited conditions. Only...... strains that carried the 67 kbp virulence plasmid or derivatives of it produced the outer membrane protein, OM2. All virulent strains harboured the 67 kbp plasmid or derivatives of it, indicating its importance for virulence. However, some strains carrying the virulence plasmid or a derivative of it...

  7. Are all noisy quantum states obtained from pure ones?

    CERN Document Server

    Henderson, L; Popescu, S

    2001-01-01

    We ask what type of mixed quantum states can arise when a number of separated parties start by sharing a pure quantum state and then this pure state becomes contaminated by noise. We show that not all mixed states arise in this way. This is even the case if the separated parties actively try to degrade their initial pure state by arbitrary local actions and classical communication.

  8. An extracellular siderophore is required to maintain the mutualistic interaction of Epichloe festucae with Lolium perenne.

    Directory of Open Access Journals (Sweden)

    Linda J Johnson

    Full Text Available We have identified from the mutualistic grass endophyte Epichloë festucae a non-ribosomal peptide synthetase gene (sidN encoding a siderophore synthetase. The enzymatic product of SidN is shown to be a novel extracellular siderophore designated as epichloënin A, related to ferrirubin from the ferrichrome family. Targeted gene disruption of sidN eliminated biosynthesis of epichloënin A in vitro and in planta. During iron-depleted axenic growth, ΔsidN mutants accumulated the pathway intermediate N(5-trans-anhydromevalonyl-N(5-hydroxyornithine (trans-AMHO, displayed sensitivity to oxidative stress and showed deficiencies in both polarized hyphal growth and sporulation. Infection of Lolium perenne (perennial ryegrass with ΔsidN mutants resulted in perturbations of the endophyte-grass symbioses. Deviations from the characteristic tightly regulated synchronous growth of the fungus with its plant partner were observed and infected plants were stunted. Analysis of these plants by light and transmission electron microscopy revealed abnormalities in the distribution and localization of ΔsidN mutant hyphae as well as deformities in hyphal ultrastructure. We hypothesize that lack of epichloënin A alters iron homeostasis of the symbiotum, changing it from mutually beneficial to antagonistic. Iron itself or epichloënin A may serve as an important molecular/cellular signal for controlling fungal growth and hence the symbiotic interaction.

  9. Visual processing in pure alexia

    DEFF Research Database (Denmark)

    Starrfelt, Randi; Habekost, Thomas; Gerlach, Christian

    2010-01-01

    Whether pure alexia is a selective disorder that affects reading only, or if it reflects a more general visual disturbance, is highly debated. We have investigated the selectivity of visual deficits in a pure alexic patient (NN) using a combination of psychophysical measures, mathematical modelling...

  10. Isomerically Pure Tetramethylrhodamine Voltage Reporters.

    Science.gov (United States)

    Deal, Parker E; Kulkarni, Rishikesh U; Al-Abdullatif, Sarah H; Miller, Evan W

    2016-07-27

    We present the design, synthesis, and application of a new family of fluorescent voltage indicators based on isomerically pure tetramethylrhodamines. These new Rhodamine Voltage Reporters, or RhoVRs, use photoinduced electron transfer (PeT) as a trigger for voltage sensing, display excitation and emission profiles in the green to orange region of the visible spectrum, demonstrate high sensitivity to membrane potential changes (up to 47% ΔF/F per 100 mV), and employ a tertiary amide derived from sarcosine, which aids in membrane localization and simultaneously simplifies the synthetic route to the voltage sensors. The most sensitive of the RhoVR dyes, RhoVR 1, features a methoxy-substituted diethylaniline donor and phenylenevinylene molecular wire at the 5'-position of the rhodamine aryl ring, exhibits the highest voltage sensitivity to date for red-shifted PeT-based voltage sensors, and is compatible with simultaneous imaging alongside green fluorescent protein-based indicators. The discoveries that sarcosine-based tertiary amides in the context of molecular-wire voltage indicators prevent dye internalization and 5'-substituted voltage indicators exhibit improved voltage sensitivity should be broadly applicable to other types of PeT-based voltage-sensitive fluorophores.

  11. A Single Blinded Randomized Controlled Study of the Effect of Conventional Oral Hypoglycemic Agents Versus Intensive Short-Term Insulin Therapy on Pure Tone Audiometry in Type II Diabetes Mellitus.

    Science.gov (United States)

    Asma, A; Azmi, M Nor; Mazita, A; Marina, M B; Salina, H; Norlaila, M

    2011-04-01

    Neuropathy is frequently a late complication of diabetes mellitus. Auditory neuropathy and microangiopathy of inner ear are the possible causes of hearing loss in diabetics. To study the correlation between glycaemic control and hearing threshold in patients with type 2 diabetes mellitus and to determine the differences of hearing threshold between groups treated with different modality. This single blind randomized controlled study was performed at the Department of Medicine and Department of Otorhinolaryngology, Hospital Universiti Kebangsaan Malaysia (UKM) between 1st May 2003 and 31st September 2004. This study was approved by Research Ethics Committee (code number FF-137). Subjects were randomized into two groups. Group 1 were patients treated with conventional oral hypoglycemic agents. The patients in group 2 were those treated with insulin injection. The subjects were seen 4 weekly for 3 months. Audiometric test were performed in all subjects at each visit. Blood were taken for fasting blood glucose, Hb1Ac, and fructosamine at every visit to determine the glycaemic controls of the subject. They were 11 patients (22 ears) treated with oral hypoglycemic agents and 17 patients treated (34 ears) with subcutaneous insulin. There is no significant difference between mean pure tone threshold before and after treatment at all frequencies in both groups. There is also no significance different in fasting glucose level and fructosamine. However, there is significant difference HbA1c levels between the two groups after treatment (P < 0.05). This study has shown that glycaemic control does not have significant impact on hearing. The hearing threshold is neither affected by insulin treatment nor by the glycaemic control.

  12. The Solution Structure, Binding Properties, and Dynamics of the Bacterial Siderophore-binding Protein FepB

    NARCIS (Netherlands)

    Chu, Byron C. H.; Otten, Renee; Krewulak, Karla D.; Mulder, Frans A.A.; Vogel, Hans J.

    2014-01-01

    The periplasmic binding protein (PBP) FepB plays a key role in transporting the catecholate siderophore ferric enterobactin from the outer to the inner membrane in Gram-negative bacteria. The solution structures of the 34-kDa apo- and holo-FepB from Escherichia coli, solved by NMR, represent the fir

  13. Increased iron-stress resilience of maize through inoculation of siderophore-producing Arthrobacter globiformis from mine.

    Science.gov (United States)

    Sharma, Meenakshi; Mishra, Vandana; Rau, Nupur; Sharma, Radhey Shyam

    2016-07-01

    Iron deficiency is common among graminaceous crops. Ecologically successful wild grasses from iron-limiting habitats are likely to harbour bacteria which secrete efficient high-affinity iron-chelating molecules (siderophores) to solubilize and mobilize iron. Such siderophore-producing rhizobacteria may increase the iron-stress resilience of graminaceous crops. Considering this, 51 rhizobacterial isolates of Dichanthium annulatum from iron-limiting abandoned mine (∼84% biologically unavailable iron) were purified and tested for siderophore production; and efficacy of Arthrobacter globiformis inoculation to increase iron-stress resilience of maize and wheat was also evaluated. 16S rRNA sequence analyses demonstrated that siderophore-producing bacteria were taxonomically diverse (seven genera, nineteen species). Among these, Gram-positive Bacillus (eleven species) was prevalent (76.92%). A. globiformis, a commonly found rhizobacterium of graminaceous crops was investigated in detail. Its siderophore has high iron-chelation capacity (ICC: 13.0 ± 2.4 μM) and effectively dissolutes diverse iron-complexes (FeCl3 : 256.13 ± 26.56 μM/ml; Fe2 O3 red: 84.3 ± 4.74 μM/ml; mine spoil: 123.84 ± 4.38 μM/ml). Siderophore production (ICC) of A. globiformis BGDa404 also varied with supplementation of different iron complexes. In plant bioassay with iron-deficiency sensitive species maize, A. globiformis inoculation triggered stress-associated traits (peroxidase and proline) in roots, enhanced plant biomass, uptake of iron and phosphate, and protein and chlorophyll contents. However, in iron deficiency tolerant species wheat, growth improvement was marginal. The present study illustrates: (i) rhizosphere of D. annulatum colonizing abandoned mine as a "hotspot" of siderophore-producing bacteria; and (ii) potential of A. globiformis BGDa404 inoculation to increase iron-stress resilience in maize. A. globiformis BGDa404 has the potential to develop as

  14. How Pure Components Control Polymer Blend Miscibility

    Science.gov (United States)

    White, Ronald; Lipson, Jane; Higgins, Julia

    2012-02-01

    We present insight into some intriguing relationships revealed by our recent studies of polymer mixture miscibility. Applying our simple lattice-based equation of state, we discuss some of the patterns observed over a sample of experimental blends. We focus on the question of how much key information can one determine from a knowledge of just the pure components only, and further, on the role of separate enthalpic and entropic contributions to the miscibility behavior. One interesting correlation connects the value of the difference in pure component energetic parameters with that of the mixed segment interactions, suggesting new possibilities for predictive modeling. We also show how in some cases these two parameter groupings act as separate controls determining the entropy and enthalpy of mixing. Also discussed are the different patterns exhibited for UCST-type and LCST-type blends, these being revealed in some cases by simple examination of the underlying microscopic parameters.

  15. Structural basis for effectiveness of siderophore-conjugated monocarbams against clinically relevant strains of Pseudomonas aeruginosa

    Energy Technology Data Exchange (ETDEWEB)

    Han, Seungil; Zaniewski, Richard P.; Marr, Eric S.; Lacey, Brian M.; Tomaras, Andrew P.; Evdokimov, Artem; Miller, J. Richard; Shanmugasundaram, Veerabahu (Pfizer)

    2012-02-08

    Pseudomonas aeruginosa is an opportunistic Gram-negative pathogen that causes nosocomial infections for which there are limited treatment options. Penicillin-binding protein PBP3, a key therapeutic target, is an essential enzyme responsible for the final steps of peptidoglycan synthesis and is covalently inactivated by {beta}-lactam antibiotics. Here we disclose the first high resolution cocrystal structures of the P. aeruginosa PBP3 with both novel and marketed {beta}-lactams. These structures reveal a conformational rearrangement of Tyr532 and Phe533 and a ligand-induced conformational change of Tyr409 and Arg489. The well-known affinity of the monobactam aztreonam for P. aeruginosa PBP3 is due to a distinct hydrophobic aromatic wall composed of Tyr503, Tyr532, and Phe533 interacting with the gem-dimethyl group. The structure of MC-1, a new siderophore-conjugated monocarbam complexed with PBP3 provides molecular insights for lead optimization. Importantly, we have identified a novel conformation that is distinct to the high-molecular-weight class B PBP subfamily, which is identifiable by common features such as a hydrophobic aromatic wall formed by Tyr503, Tyr532, and Phe533 and the structural flexibility of Tyr409 flanked by two glycine residues. This is also the first example of a siderophore-conjugated triazolone-linked monocarbam complexed with any PBP. Energetic analysis of tightly and loosely held computed hydration sites indicates protein desolvation effects contribute significantly to PBP3 binding, and analysis of hydration site energies allows rank ordering of the second-order acylation rate constants. Taken together, these structural, biochemical, and computational studies provide a molecular basis for recognition of P. aeruginosa PBP3 and open avenues for future design of inhibitors of this class of PBPs.

  16. Identification of a DtxR-regulated operon that is essential for siderophore-dependent iron uptake in Corynebacterium diphtheriae.

    Science.gov (United States)

    Qian, Yilei; Lee, John H; Holmes, Randall K

    2002-09-01

    The diphtheria toxin repressor (DtxR) uses Fe(2+) as a corepressor and inhibits transcription from iron-regulated promoters (IRPs) in Corynebacterium diphtheriae. A new IRP, designated IRP6, was cloned from C. diphtheriae by a SELEX-like procedure. DtxR bound to IRP6 in vitro only in the presence of appropriate divalent metal ions, and repression of IRP6 by DtxR in an Escherichia coli system was iron dependent. The open reading frames (ORFs) downstream from IRP6 and previously described promoter IRP1 were found to encode proteins homologous to components of ATP-binding cassette (ABC) transport systems involved in high-affinity iron uptake in other bacteria. IRP1 and IRP6 were repressed under high-iron conditions in wild-type C. diphtheriae C7(beta), but they were expressed constitutively in C7(beta) mutant strains HC1, HC3, HC4, and HC5, which were shown previously to be defective in corynebactin-dependent iron uptake. A clone of the wild-type irp6 operon (pCM6ABC) complemented the constitutive corynebactin production phenotype of HC1, HC4, and HC5 but not of HC3, whereas a clone of the wild-type irp1 operon failed to complement any of these strains. Complementation by subclones of pCM6ABC demonstrated that mutant alleles of irp6A, irp6C, and irp6B were responsible for the phenotypes of HC1, HC4, and HC5, respectively. The irp6A allele in HC1 and the irp6B allele in HC5 encoded single amino acid substitutions in their predicted protein products, and the irp6C allele in HC4 caused premature chain termination of its predicted protein product. Strain HC3 was found to have a chain-terminating mutation in dtxR in addition to a missense mutation in its irp6B allele. These findings demonstrated that the irp6 operon in C. diphtheriae encodes a putative ABC transporter, that specific mutant alleles of irp6A, irp6B, and irp6C are associated with defects in corynebactin-dependent iron uptake, and that complementation of these mutant alleles restores repression of corynebactin

  17. Relativity of pure states entanglement

    CERN Document Server

    Zyczkowski, K; Zyczkowski, Karol; Bengtsson, Ingemar

    2002-01-01

    Entanglement of any pure state of an N times N bi-partite quantum system may be characterized by the vector of coefficients arising by its Schmidt decomposition. We analyze various measures of entanglement derived from the generalized entropies of the vector of Schmidt coefficients. For N >= 3 they generate different ordering in the set of pure states and for some states their ordering depends on the measure of entanglement used. This odd-looking property is acceptable, since these incomparable states cannot be transformed to each other with unit efficiency by any local operation. In analogy to special relativity the set of pure states equivalent under local unitaries has a causal structure so that at each point the set splits into three parts: the 'Future', the 'Past' and the set of noncomparable states.

  18. "Pure" cutaneous histiocytosis-X.

    Science.gov (United States)

    Wolfson, S L; Botero, F; Hurwitz, S; Pearson, H A

    1981-11-15

    The case histories of two young children who experienced skin rashes involving various areas of the body are reported. The diagnosis of pure cutaneous histiocytosis-X was established after extensive studies revealed no other organ involvement. The patients were treated with oral corticosteroids. Currently, both children are in good health, show no evidence of disease, and have been followed over a four-to-five-year period. Therapy with corticosteroids may not be indicated with pure cutaneous histiocytosis-X unless there is evidence of extracutaneous dissemination or rapid progression of the disease.

  19. Relative importance of fluorescent siderophores and other factors in biological control of Gaeumannomyces graminis var. tritici by Pseudomonas fluorescens 2-79 and M4-80R.

    Science.gov (United States)

    Hamdan, H; Weller, D M; Thomashow, L S

    1991-11-01

    Pseudomonas fluorescens 2-79 suppresses take-all, a major root disease of wheat caused by Gaeumannomyces graminis var. tritici. The bacteria produce an antibiotic, phenazine-1-carboxylic acid (PCA), and a fluorescent pyoverdin siderophore. Previous studies have established that PCA has an important role in the biological control of take-all but that antibiotic production does not account fully for the suppressiveness of the strain. To define the role of the pyoverdin siderophore more precisely, mutants deficient in production of the antibiotic, the siderophore, or both factors were constructed and compared with the parental strain for control of take-all on wheat roots. In all cases, strains that produced PCA were more suppressive than those that did not, and pyoverdin-deficient mutant derivatives controlled take-all as effectively as their respective fluorescent parental strains. Thus, the phenazine antibiotic was the dominant factor in disease suppression and the fluorescent siderophore had little or no role. The siderophore also was of minor importance in a second strain, P. fluorescens M4-80R, that does not produce PCA. Strains 2-79 and M4-80R both produced substances distinct from the pyoverdin siderophore that were responsible for fungal inhibition in vitro under iron limitation, but these substances also had, at most, a minor role in disease suppression in situ.

  20. Growth promoting influence of siderophore-producing Pseudomonas strains GRP3A and PRS9 in maize (Zea mays L.) under iron limiting conditions.

    Science.gov (United States)

    Sharma, Alok; Johri, B N

    2003-01-01

    Maize seeds were bacterized with siderophore-producing pseudomonads with the goal to develop a system suitable for better iron uptake under iron-stressed conditions. Siderophore production was compared in fluorescent Pseudomonas spp. GRP3A, PRS9 and P. chlororaphis ATCC 9446 in standard succinate (SSM) and citrate (SCM) media. Succinate was better suited for siderophore production, however, deferration of media resulted in increased siderophore production in all the strains. Maximum siderophore level (216.23 microg/ml) was observed in strain PRS9 in deferrated SSM after 72 h of incubation. Strains GRP3A and PRS9 were used for plant growth promotion experiments. Strains GRP3A and PRS9 were also antagonistic against the phytopathogens, Colletotrichum dematium, Rhizoctonia solani and Sclerotium rolfsii. Bacterization of maize seeds with strains GRP3A and PRS9 showed significant increase in germination percentage and plant growth. Maximum shoot and root length and dry weight were observed with 10 microM Fe3+ along with bacterial inoculants suggesting application of siderophore producing plant growth promoting rhizobacterial strains in crop productivity in calcareous soil system.

  1. Equilibrium Fe isotope fractionation between inorganic aqueous Fe(III) and the siderophore complex, Fe(III)-desferrioxamine B

    DEFF Research Database (Denmark)

    Dideriksen, Knud; Baker, Joel A.; Stipp, Susan Louise Svane

    2008-01-01

    be controlled by isotope fractionation between the free and complexed iron.We have determined the equilibrium Fe isotope fractionation induced by organic ligand activity in experiments with solutions having co-existing inorganic Fe(III) species and siderophore complexes, Fedesferrioxamine B (at pH 2). The two......In oxic oceans, most of the dissolved iron (Fe) exists as complexes with siderophore-like, strongly coordinating organic ligands. Thus, the isotope composition of the little amount of free inorganic Fe that is available for precipitation and preservation in the geological record may largely...... for the slower stage, indicating that approximately 40% reequilibration may take place during the separation of the two pools. To further test if the induced precipitation leads to experimental artefacts, the fractionation during precipitation of inorganic Fe was determined. Assuming a Rayleigh...

  2. Structure and biosynthetic assembly of cupriachelin, a photoreactive siderophore from the bioplastic producer Cupriavidus necator H16.

    Science.gov (United States)

    Kreutzer, Martin F; Kage, Hirokazu; Nett, Markus

    2012-03-21

    The bacterium Cupriavidus necator H16 produces a family of linear lipopeptides when grown under low iron conditions. The structural composition of these molecules, exemplified by the main metabolite cupriachelin, is reminiscent of siderophores that are excreted by marine bacteria. Comparable to marine siderophores, the ferric form of cupriachelin exhibits photoreactive properties. Exposure to UV light induces an oxidation of its peptidic backbone and a concomitant reduction of the coordinated Fe(III). Here, we report the genomics-inspired isolation and structural characterization of cupriachelin as well as its encoding gene cluster, which was identified by insertional mutagenesis. Based upon the functional characterization of adenylation domain specificity, a model for cupriachelin biosynthesis is proposed.

  3. Pure robotic retrocaval ureter repair

    Directory of Open Access Journals (Sweden)

    Ashok k. Hemal

    2008-12-01

    Full Text Available PURPOSE: To demonstrate the feasibility of pure robotic retrocaval ureter repair. MATERIALS AND METHODS: A 33 year old female presented with right loin pain and obstruction on intravenous urography with the classical "fish-hook" appearance. She was counseled on the various methods of repair and elected to have a robot assisted repair. The following steps are performed during a pure robotic retrocaval ureter repair. The patient is placed in a modified flank position, pneumoperitoneum created and ports inserted. The colon is mobilized to expose the retroperitoneal structures: inferior vena cava, right gonadal vein, right ureter, and duodenum. The renal pelvis and ureter are mobilized and the renal pelvis transected. The ureter is transposed anterior to the inferior vena cava and a pyelopyelostomy is performed over a JJ stent. RESULTS: This patient was discharged on postoperative day 3. The catheter and drain tube were removed on day 1. Her JJ stent was removed at 6 weeks postoperatively. The postoperative intravenous urography at 3 months confirmed normal drainage of contrast medium. CONCLUSION: Pure robotic retrocaval ureter is a feasible procedure; however, there does not appear to be any great advantage over pure laparoscopy, apart from the ergonomic ease for the surgeon as well the simpler intracorporeal suturing.

  4. Preclinical evaluation of two {sup 68}Ga-siderophores as potential radiopharmaceuticals for Aspergillus fumigatus infection imaging

    Energy Technology Data Exchange (ETDEWEB)

    Petrik, Milos [Innsbruck Medical University, Clinical Department of Nuclear Medicine, Innsbruck (Austria); Palacky University, Laboratory of Experimental Medicine, Institute of Molecular and Translational Medicine, Olomouc (Czech Republic); Franssen, Gerben M.; Laverman, Peter [Radboud University Nijmegen Medical Center, Department of Nuclear Medicine, Nijmegen (Netherlands); Haas, Hubertus; Schrettl, Markus [Innsbruck Medical University, Division of Molecular Biology/Biocenter, Innsbruck (Austria); Hoertnagl, Caroline; Lass-Floerl, Cornelia [Innsbruck Medical University, Department of Hygiene, Microbiology and Social Medicine, Innsbruck (Austria); Helbok, Anna; Decristoforo, Clemens [Innsbruck Medical University, Clinical Department of Nuclear Medicine, Innsbruck (Austria)

    2012-07-15

    Invasive pulmonary aspergillosis is mainly caused by Aspergillus fumigatus, and is one of the major causes of morbidity and mortality in immunocompromised patients. The mortality associated with invasive pulmonary aspergillosis remains high, mainly due to the difficulties and limitations in diagnosis. We have shown that siderophores can be labelled with {sup 68}Ga and can be used for PET imaging of A. fumigatus infection in rats. Here we report on the further evaluation of the most promising {sup 68}Ga-siderophore candidates, triacetylfusarinine (TAFC) and ferrioxamine E (FOXE). Siderophores were labelled with {sup 68}Ga using acetate buffer. Log P, protein binding and stability values were determined. Uptake by A. fumigatus was studied in vitro in cultures with high and low iron loads. In vivo biodistribution was determined in normal mice and an infection model was established using neutropenic rats inoculated with A. fumigatus. Static and dynamic {mu}PET imaging was performed and correlated with CT images, and lung infection was evaluated ex vivo. {sup 68}Ga-siderophores were labelled with high radiochemical purity and specific activity. {sup 68}Ga-TAFC and {sup 68}Ga-FOXE showed high uptake by A. fumigatus in iron-deficient cultures. In normal mice, {sup 68}Ga-TAFC and {sup 68}Ga-FOXE showed rapid renal excretion with high metabolic stability. In the rat infection model focal lung uptake was detected by {mu}PET with both compounds and increased with severity of the infection, correlating with abnormal CT images. {sup 68}Ga-TAFC and {sup 68}Ga-FOXE displayed excellent in vitro stability and high uptake by A. fumigatus. Both compounds showed excellent pharmacokinetics, highly selective accumulation in infected lung tissue and good correlation with severity of disease in a rat infection model, which makes them promising agents for A. fumigatus infection imaging. (orig.)

  5. Siderophore-mediated iron acquisition systems in Bacillus cereus: Identification of receptors for anthrax virulence-associated petrobactin .

    Science.gov (United States)

    Zawadzka, Anna M; Abergel, Rebecca J; Nichiporuk, Rita; Andersen, Ulla N; Raymond, Kenneth N

    2009-04-28

    During growth under iron limitation, Bacillus cereus and Bacillus anthracis, two human pathogens from the Bacillus cereus group of Gram-positive bacteria, secrete two siderophores, bacillibactin (BB) and petrobactin (PB), for iron acquisition via membrane-associated substrate-binding proteins (SBPs) and other ABC transporter components. Since PB is associated with virulence traits in B. anthracis, the PB-mediated iron uptake system presents a potential target for antimicrobial therapies; its characterization in B. cereus is described here. Separate transporters for BB, PB, and several xenosiderophores are suggested by (55)Fe-siderophore uptake studies. The PB precursor, 3,4-dihydroxybenzoic acid (3,4-DHB), and the photoproduct of FePB (FePB(nu)) also mediate iron delivery into iron-deprived cells. Putative SBPs were recombinantly expressed, and their ligand specificity and binding affinity were assessed using fluorescence spectroscopy. The noncovalent complexes of the SBPs with their respective siderophores were characterized using ESI-MS. The differences between solution phase behavior and gas phase measurements are indicative of noncovalent interactions between the siderophores and the binding sites of their respective SBPs. These studies combined with bioinformatics sequence comparison identify SBPs from five putative transporters specific for BB and enterobactin (FeuA), 3,4-DHB and PB (FatB), PB (FpuA), schizokinen (YfiY), and desferrioxamine and ferrichrome (YxeB). The two PB receptors show different substrate ranges: FatB has the highest affinity for ferric 3,4-DHB, iron-free PB, FePB, and FePB(nu), whereas FpuA is specific to only apo- and ferric PB. The biochemical characterization of these SBPs provides the first identification of the transporter candidates that most likely play a role in the B. cereus group pathogenicity.

  6. Siderophore-mediated iron acquisition systems in Bacillus cereus: identification of receptors for anthrax virulence-associated petrobactin†a

    Science.gov (United States)

    Zawadzka, Anna M.; Abergel, Rebecca J.; Nichiporuk, Rita; Andersen, Ulla N.; Raymond, Kenneth N.

    2009-01-01

    During growth under iron limitation, Bacillus cereus and Bacillus anthracis, two human pathogens from the Bacillus cereus group of Gram-positive bacteria, secrete two siderophores, bacillibactin (BB) and petrobactin (PB), for iron acquisition via membrane-associated substrate-binding proteins (SBPs) and other ABC transporter components. Since PB is associated with virulence traits in B. anthracis, the PB-mediated iron uptake system presents a potential target for antimicrobial therapies; its characterization in B. cereus is described here. Separate transporters for BB, PB, and several xenosiderophores are suggested by 55Fe-siderophore uptake studies. The PB precursor, 3,4-dihydroxybenzoic acid (3,4-DHB), and the photoproduct of FePB (FePBν) also mediate iron delivery into iron-deprived cells. Putative SBPs were recombinantly expressed, and their ligand specificity and binding affinity assessed using fluorescence spectroscopy. The noncovalent complexes of the SBPs with their respective siderophores were characterized using ESI-MS. The differences between solution phase behavior and gas phase measurements are indicative of noncovalent interactions between the siderophores and the binding sites of their respective SBPs. These studies combined with bioinformatics sequence comparison identify SBPs from five putative transporters specific for BB and enterobactin (FeuA), 3,4-DHB and PB (FatB), PB (FpuA), schizokinen (YfiY), and desferrioxamine and ferrichrome (YxeB). The two PB receptors show different substrate ranges: FatB has the highest affinity for ferric 3,4-DHB, iron-free PB, FePB, and FePBν, whereas FpuA is specific to only apo- and ferric PB. The biochemical characterization of these SBPs provides the first identification of the transporter candidates that most likely play a role in the B. cereus group pathogenicity. PMID:19254027

  7. Synthesis and structural characterization of hexacoordinate silicon, germanium, and titanium complexes of the E. coli siderophore enterobactin.

    Science.gov (United States)

    Baramov, Todor; Keijzer, Karlijn; Irran, Elisabeth; Mösker, Eva; Baik, Mu-Hyun; Süssmuth, Roderich

    2013-08-01

    The E. coli siderophore enterobactin, one of the strongest Fe(III) chelators known to date, is also capable of binding Si(IV) under physiological conditions. We report on the synthesis and structural characterization of the tris(catecholate) Si(IV) -enterobactin complex and its Ge(IV) and Ti(IV) analogues. Comparative structural analysis, supported by quantum-chemical calculations, reveals the correlation between the ionic radius and the structural changes in enterobactin upon complexation.

  8. [Application potential of siderophore-producing rhizobacteria in phytoremediation of heavy metals-contaminated soils: a review].

    Science.gov (United States)

    Wang, Ying-Li; Lin, Qing-Qi; Li, Yu; Yang, Xiu-Hong; Wang, Shi-Zhong; Qiu, Rong-Liang

    2013-07-01

    Siderophore-producing rhizobacteria (SPR) are a group of plant growth-promoting rhizobacteria, being able to play an important role in assisting the phytoremediation of heavy metals-contaminated soils. Based on the comprehensive analysis of related researches at home and abroad, this paper elaborated the functions of SPR in alleviating the heavy metals stress and toxicity to plants and the mechanisms of SPR in improving the heavy metals bioavailability in soil, and indicated that SPR had good application potential in promoting the plant growth in heavy metals-contaminated soils and reinforcing the heavy metals accumulation in plants. The contradictory phenomena of SPR in increasing or decreasing heavy metals accumulation in plants, which existed in current researches, were also analyzed. Aiming at the deficiencies in current researches, it was suggested that in the future researches, the mechanisms of the interactions between SPR and plants, especially hyperaccumulators, should be further studied, the key factors affecting the heavy metals complexation and mobilization in soil by siderophores should also be further clarified, the effects of siderophores on the heavy metals bioavailability and its subsequent influence on the heavy metals uptake by plants should be comprehensively considered, and the measures for improving the colonization of SPR in heavy metals-contaminated soil should be explored.

  9. Siderophore biosynthesis coordinately modulated the virulence-associated interactive metabolome of uropathogenic Escherichia coli and human urine.

    Science.gov (United States)

    Su, Qiao; Guan, Tianbing; Lv, Haitao

    2016-04-14

    Uropathogenic Escherichia coli (UPEC) growth in women's bladders during urinary tract infection (UTI) incurs substantial chemical exchange, termed the "interactive metabolome", which primarily accounts for the metabolic costs (utilized metabolome) and metabolic donations (excreted metabolome) between UPEC and human urine. Here, we attempted to identify the individualized interactive metabolome between UPEC and human urine. We were able to distinguish UPEC from non-UPEC by employing a combination of metabolomics and genetics. Our results revealed that the interactive metabolome between UPEC and human urine was markedly different from that between non-UPEC and human urine, and that UPEC triggered much stronger perturbations in the interactive metabolome in human urine. Furthermore, siderophore biosynthesis coordinately modulated the individualized interactive metabolome, which we found to be a critical component of UPEC virulence. The individualized virulence-associated interactive metabolome contained 31 different metabolites and 17 central metabolic pathways that were annotated to host these different metabolites, including energetic metabolism, amino acid metabolism, and gut microbe metabolism. Changes in the activities of these pathways mechanistically pinpointed the virulent capability of siderophore biosynthesis. Together, our findings provide novel insights into UPEC virulence, and we propose that siderophores are potential targets for further discovery of drugs to treat UPEC-induced UTI.

  10. Crystallization and X-ray diffraction analysis of salicylate synthase, a chorismate-utilizing enyme involved in siderophore biosynthesis

    Energy Technology Data Exchange (ETDEWEB)

    Parsons, James F., E-mail: parsonsj@umbi.umd.edu; Shi, Katherine; Calabrese, Kelly [Center for Advanced Research in Biotechnology, The University of Maryland Biotechnology Institute, 9600 Gudelsky Drive, Rockville, MD 20850 (United States); Ladner, Jane E. [Center for Advanced Research in Biotechnology, The University of Maryland Biotechnology Institute, 9600 Gudelsky Drive, Rockville, MD 20850 (United States); National Institute of Standards and Technology (United States)

    2006-03-01

    Salicylate synthase, which catalyzes the first step in the synthesis of the siderophore yersiniabactin, has been crystallized. Diffraction data have been collected to 2.5 Å. Bacteria have evolved elaborate schemes that help them thrive in environments where free iron is severely limited. Siderophores such as yersiniabactin are small iron-scavenging molecules that are deployed by bacteria during iron starvation. Several studies have linked siderophore production and virulence. Yersiniabactin, produced by several Enterobacteriaceae, is derived from the key metabolic intermediate chorismic acid via its conversion to salicylate by salicylate synthase. Crystals of salicylate synthase from the uropathogen Escherichia coli CFT073 have been grown by vapour diffusion using polyethylene glycol as the precipitant. The monoclinic (P2{sub 1}) crystals diffract to 2.5 Å. The unit-cell parameters are a = 57.27, b = 164.07, c = 59.04 Å, β = 108.8°. The solvent content of the crystals is 54% and there are two molecules of the 434-amino-acid protein in the asymmetric unit. It is anticipated that the structure will reveal key details about the reaction mechanism and the evolution of salicylate synthase.

  11. Pure and Public, Popular and personal

    DEFF Research Database (Denmark)

    Eriksson, Birgit

    2013-01-01

    In the article I reexamine the traditional aesthetical and political critiques of popular culture and reevaluate the social and communicative potential of bestselling cultural artifacts such as highly popular television series. First, I sketch the alleged aesthetic and social problems of popular...... and the exclusions of the public sphere. I argue that the ideals of a pure aesthetic and a public sphere neglect issues that are crucial to the type of commonality at stake in popular cultural artifacts: personal issues, social conflicts, and what is pleasurable to the senses or has to do with emotions. Third, I...

  12. Shunting arc plasma source for pure carbon ion beam.

    Science.gov (United States)

    Koguchi, H; Sakakita, H; Kiyama, S; Shimada, T; Sato, Y; Hirano, Y

    2012-02-01

    A plasma source is developed using a coaxial shunting arc plasma gun to extract a pure carbon ion beam. The pure carbon ion beam is a new type of deposition system for diamond and other carbon materials. Our plasma device generates pure carbon plasma from solid-state carbon material without using a hydrocarbon gas such as methane gas, and the plasma does not contain any hydrogen. The ion saturation current of the discharge measured by a double probe is about 0.2 mA∕mm(2) at the peak of the pulse.

  13. Shunting arc plasma source for pure carbon ion beama)

    Science.gov (United States)

    Koguchi, H.; Sakakita, H.; Kiyama, S.; Shimada, T.; Sato, Y.; Hirano, Y.

    2012-02-01

    A plasma source is developed using a coaxial shunting arc plasma gun to extract a pure carbon ion beam. The pure carbon ion beam is a new type of deposition system for diamond and other carbon materials. Our plasma device generates pure carbon plasma from solid-state carbon material without using a hydrocarbon gas such as methane gas, and the plasma does not contain any hydrogen. The ion saturation current of the discharge measured by a double probe is about 0.2 mA/mm2 at the peak of the pulse.

  14. Manifolds of interconvertible pure states

    OpenAIRE

    Sinolecka, Magdalena M.; Zyczkowski, Karol; Kus, Marek

    2001-01-01

    Local orbits of a pure state of an N x N bi-partite quantum system are analyzed. We compute their dimensions which depends on the degeneracy of the vector of coefficients arising by the Schmidt decomposition. In particular, the generic orbit has 2N^2 -N-1 dimensions, the set of separable states is 4(N-1) dimensional, while the manifold of maximally entangled states has N^2-1 dimensions.

  15. Manifolds of interconvertible pure states

    CERN Document Server

    Sinolecka, M M; Kus, M; Sinolecka, Magdalena M.; Zyczkowski, Karol; Kus, Marek

    2002-01-01

    Local orbits of a pure state of an N x N bi-partite quantum system are analyzed. We compute their dimensions which depends on the degeneracy of the vector of coefficients arising by the Schmidt decomposition. In particular, the generic orbit has 2N^2 -N-1 dimensions, the set of separable states is 4(N-1) dimensional, while the manifold of maximally entangled states has N^2-1 dimensions.

  16. Multimedia programming with pure data

    CERN Document Server

    Chung, Bryan

    2013-01-01

    A quick and comprehensive tutorial book for media designers to jump-start interactive multimedia production with computer graphics, digital audio, digital video, and interactivity, using the Pure Data graphical programming environment.An introductory book on multimedia programming for media artists/designers who like to work on interactivity in their projects, digital art/design students who like to learn the first multimedia programming technique, and audio-visual performers who like to customize their performance sets

  17. (Not so) pure Lovelock Kasner metrics

    CERN Document Server

    Camanho, Xián O; Molina, Alfred

    2016-01-01

    The gravitational interaction is expected to be modified for very short distances. This is particularly important in situations in which the curvature of spacetime is large in general, such as close to the initial cosmological singularity. The gravitational dynamics is then captured by the higher curvature terms in the action, making it difficult to reliably extrapolate any prediction of general relativity. In this note we review pure Lovelock equations for Kasner-type metrics. These equations correspond to a single $N$th order Lovelock term in the action in $d=2N+1,\\,2N+2$ dimensions, and they capture the relevant gravitational dynamics when aproaching the big-bang singularity within the Lovelock family of theories. These are classified in several isotropy types. Some of these families correspond to degenerate classes of solutions, such that their dynamics is not completely determined by the equations of pure Lovelock gravity. Instead, these Kasner solutions become sensitive to the subleading terms in the Lo...

  18. The RpoS Sigma Factor Negatively Regulates Production of IAA and Siderophore in a Biocontrol Rhizobacterium, Pseudomonas chlororaphis O6

    Directory of Open Access Journals (Sweden)

    Sang A Oh

    2013-09-01

    Full Text Available The stationary-phase sigma factor, RpoS, influences the expression of factors important in survival of Pseudomonas chlororaphis O6 in the rhizosphere. A partial proteomic profile of a rpoS mutant in P. chlororaphis O6 was conducted to identify proteins under RpoS regulation. Five of 14 differentially regulated proteins had unknown roles. Changes in levels of proteins in P. chlororaphis O6 rpoS mutant were associated with iron metabolism, and protection against oxidative stress. The P. chlororaphis O6 rpoS mutant showed increased production of a pyoverdine-like siderophore, indole acetic acid, and altered isozyme patterns for peroxidase, catalase and superoxide dismutase. Consequently, sensitivity to hydrogen peroxide exposure increased in the P. chlororaphis O6 rpoS mutant, compared with the wild type. Taken together, RpoS exerted regulatory control over factors important for the habitat of P. chlororaphis O6 in soil and on root surfaces. The properties of several of the proteins in the RpoS regulon are currently unknown.

  19. [The left central gyral lesion and pure anarthria].

    Science.gov (United States)

    Tabuchi, M; Odashima, K; Fujii, T; Suzuki, K; Saitou, J; Yamadori, A

    2000-05-01

    We report a very rare case of pure anarthria with lesion analysis. A 44-year-old right-handed man suffered from a cerebral infarction with a mild right hemiparesis and speech disturbance. An MRI of the brain 1.5 months post onset revealed a lesion confined to the left central gyrus. One month after the onset, his spontaneous speech was dysprosodic and laborious. It was contaminated with dysarthria and phonological paraphasias. However, language comprehension, repetition and naming abilities were normal. Most remarkably he showed no impairment in writing with his left hand. Over the following months, his difficulties in verbal output showed general amelioration, but the isolated impairment in the domain of articulation characterized by dysprosody, dysarthria, and phonological paraphasia persisted. As for the symptomatology of pure anarthria resulting from precentral gyral lesions, there have been controversies about its pureness. Some argue that the so called pure anarthria always shows some degree of writing disturbances, albeit mild in degree. Others maintain there certainly exists the pure type without any signs of agraphia. In the present case lesions were limited to the central gyrus but spared the lowest opercular portion. The previous reports of pure anarthria that had mild agraphia all had lesions involving the opercular portion. We conclude the sparing of this area is most likely related with sparing of writing capacity in pure anarthria.

  20. Synaptic devices based on purely electronic memristors

    Energy Technology Data Exchange (ETDEWEB)

    Pan, Ruobing [Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo 315201 (China); Institute of Materials Science, School of Materials Science and Engineering, Shanghai University, Shanghai 200072 (China); Li, Jun; Zhuge, Fei, E-mail: zhugefei@nimte.ac.cn, E-mail: h-cao@nimte.ac.cn; Zhu, Liqiang; Liang, Lingyan; Zhang, Hongliang; Gao, Junhua; Cao, Hongtao, E-mail: zhugefei@nimte.ac.cn, E-mail: h-cao@nimte.ac.cn; Fu, Bing; Li, Kang [Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo 315201 (China)

    2016-01-04

    Memristive devices have been widely employed to emulate biological synaptic behavior. In these cases, the memristive switching generally originates from electrical field induced ion migration or Joule heating induced phase change. In this letter, the Ti/ZnO/Pt structure was found to show memristive switching ascribed to a carrier trapping/detrapping of the trap sites (e.g., oxygen vacancies or zinc interstitials) in ZnO. The carrier trapping/detrapping level can be controllably adjusted by regulating the current compliance level or voltage amplitude. Multi-level conductance states can, therefore, be realized in such memristive device. The spike-timing-dependent plasticity, an important Hebbian learning rule, has been implemented in this type of synaptic device. Compared with filamentary-type memristive devices, purely electronic memristors have potential to reduce their energy consumption and work more stably and reliably, since no structural distortion occurs.

  1. Siderophore-mediated iron acquisition influences motility and is required for full virulence of the xylem-dwelling bacterial phytopathogen Pantoea stewartii subsp. stewartii.

    Science.gov (United States)

    Burbank, Lindsey; Mohammadi, Mojtaba; Roper, M Caroline

    2015-01-01

    Iron is a key micronutrient for microbial growth but is often present in low concentrations or in biologically unavailable forms. Many microorganisms overcome this challenge by producing siderophores, which are ferric-iron chelating compounds that enable the solubilization and acquisition of iron in a bioactive form. Pantoea stewartii subsp. stewartii, the causal agent of Stewart's wilt of sweet corn, produces a siderophore under iron-limiting conditions. The proteins involved in the biosynthesis and export of this siderophore are encoded by the iucABCD-iutA operon, which is homologous to the aerobactin biosynthetic gene cluster found in a number of enteric pathogens. Mutations in iucA and iutA resulted in a decrease in surface-based motility that P. stewartii utilizes during the early stages of biofilm formation, indicating that active iron acquisition impacts surface motility for P. stewartii. Furthermore, bacterial movement in planta is also dependent on a functional siderophore biosynthesis and uptake pathway. Most notably, siderophore-mediated iron acquisition is required for full virulence in the sweet corn host, indicating that active iron acquisition is essential for pathogenic fitness for this important xylem-dwelling bacterial pathogen. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  2. Universality in pure gravity mediation

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Jason L.; Olive, Keith A. [University of Minnesota, William I. Fine Theoretical Physics Institute, School of Physics and Astronomy, Minneapolis, MN (United States); Ibe, Masahiro [University of Tokyo, ICRR, Kashiwa (Japan); University of Tokyo, Kavli IPMU, TODIAS, Kashiwa (Japan); Yanagida, Tsutomu T. [University of Tokyo, Kavli IPMU, TODIAS, Kashiwa (Japan)

    2013-07-15

    If low-energy supersymmetry is realized in nature, the apparent discovery of a Higgs boson with mass around 125 GeV suggests a supersymmetric mass spectrum in the TeV or multi-TeV range. Multi-TeV scalar masses are a necessary component of supersymmetric models with pure gravity mediation or in any model with strong moduli stabilization. Here, we show that full scalar mass universality remains viable as long as the ratio of Higgs vevs, tan{beta}, is relatively small (

  3. Toxicological evaluation of pure hydroxytyrosol.

    Science.gov (United States)

    Auñon-Calles, David; Canut, Lourdes; Visioli, Francesco

    2013-05-01

    Of all the phenolic constituents of olives and extra virgin olive oil, hydroxytyrosol is currently being actively exploited as a potential supplement or preservative to be employed in the nutraceutical, cosmeceutical, and food industry. In terms of safety profile, hydroxytyrosol has only been investigated as the predominant part of raw olive mill waste water extracts, due to the previous unavailability of appropriate quantities of the pure compound. We report the toxicological evaluation of hydroxytyrosol and, based on the results, propose a No Observed Adverse Effects Level (NOAEL) of 500mg/kg/d.

  4. Synthesis of Enantiomerically Pure Anthracyclinones

    Science.gov (United States)

    Achmatowicz, Osman; Szechner, Barbara

    The anthracycline antibiotics are among the most important clinical drugs used in the treatment of human cancer. The search for new agents with improved therapeutic efficacy and reduced cardiotoxicity stimulated considerable efforts in the synthesis of new analogues. Since the biological activity of anthracyclines depends on their natural absolute configuration, various strategies for the synthesis of enantiomerically pure anthracyclinones (aglycones) have been developed. They comprise: resolution of racemic intermediate, incorporation of a chiral fragment derived from natural and non-natural chiral pools, asymmetric synthesis with the use of a chiral auxiliary or a chiral reagent, and enantioselective catalysis. Synthetic advances towards enantiopure anthracyclinones reported over the last 17 years are reviewed.

  5. Pure dysarthria due to an insular infarction.

    Science.gov (United States)

    Hiraga, Akiyuki; Tanaka, Saiko; Kamitsukasa, Ikuo

    2010-06-01

    Cortical infarction presenting with pure dysarthria is rarely reported. Previous studies have reported pure dysarthria due to cortical stroke at the precentral gyrus or middle frontal gyrus. We report a 72-year-old man who developed pure dysarthria caused by an acute cortical infarction in the insular cortex. The role of the insula in language has been difficult to assess clinically because of the rarity of pure insular strokes. Our patient showed pure dysarthria without aphasia, indicating that pure dysarthria can be the sole manifestation of insular infarctions.

  6. Application of EST Data of Siderophore Regulation Protein-like Gene of Aspergillus oryzae RIB40

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Objective: To acquire the new clear color phenotype of Aspergillus oryzae b y th e antisense strategy of siderophore regulation protein (SREP)-like gene. Method s: Construct the cDNA library of Aspergillus oryzae RIB40 and amplify the fr agme nt ac7336f from the every EST clone, which had high homology with SREP gene of o ther species, then construct the eukaryotic expression vector with SREP-like ge ne using antisense strategy. Results: The sequence of this SREP-like gene was a cquired, the vector was successfully constructed. Conclusion: The deduced amino acid sequence of SREP-like gene of Aspergillus oryzae indicated that there is t he high homology with those of SREP genes of Penicillium chrysogenum, Neur ospora crassa and Schizosaccharomyces pombe.%目的:通过反义RNA技术获取稻属曲霉(Aspergillus oryzae)新的表现型.方法:应用BLAST网络服务对稻属曲霉EST数据进行同源性比较,PCR扩增与其它种属铁配体调节蛋白基因(SREP)具有高度同源性的ac7336f片段并反向插入pUSA真核表达载体.结果:测得铁配体调节蛋白类似基因的序列,完成反义表达载体构建.结论:由铁配体调节蛋白类似基因的DNA序列推出的氨基酸序列与Penicillium chrysogenum, Neurospora crassa和Schizosaccharomyces pombe等种属铁配体调节蛋白基因的氨基酸序列具有高度同源性.

  7. Hole transport in pure and doped hematite

    Science.gov (United States)

    Liao, Peilin; Carter, Emily A.

    2012-07-01

    Hematite (α-Fe2O3) is a promising candidate for use in photovoltaic (PV) and photoelectrochemical devices. Its poor conductivity is one major drawback. Doping hematite either p-type or n-type greatly enhances its measured conductivity and is required for potential p-n junctions in PVs. Here, we study hole transport in pure and doped hematite using an electrostatically embedded cluster model with ab initio quantum mechanics (unrestricted Hartree-Fock theory). Consistent with previous work, the model suggests that hole hopping is via oxygen anions for pure hematite. The activation energy for hole mobility is predicted to be at least 0.1 eV higher than the activation energy for electron mobility, consistent with the trend observed in experiments. We examine four dopants—magnesium(II), nickel(II), copper(II), and manganese(II/III) in direct cation substitution sites—to gain insight into the mechanism by which conductivity is improved. The activation energies are used to assess qualitative effects of different dopants. The hole carriers are predicted to be attracted to O anions near the dopants. The magnitude of the trapping effect is similar among the four dopants in their +2 oxidation states. The multivalent character of Mn doping facilitates local hole transport around Mn centers via a low-barrier O-Mn-O pathway, which suggests that higher hole mobility can be achieved with increasing Mn doping concentration, especially when a network of these low-barrier pathways is produced. Our results suggest that the experimentally observed conductivity increase in Mg-, Ni-, and Cu-doped p-type hematite is mostly due to an increase in hole carriers rather than improved mobility, and that Mg-, Ni-, and Cu-doping perform similarly, while the conductivity of Mn-doped hematite might be significantly improved in the high doping concentration limit.

  8. ABSOLUTELY E-PURE MODULES AND E-PURE SPLIT MODULES

    Institute of Scientific and Technical Information of China (English)

    Yan Hangyu

    2011-01-01

    We first introduce the concepts of absolutely E-pure modules and Epure split modules. Then, we characterize the IF rings in terms of absolutely E-pure modules. The E-pure split modules are also characterized.

  9. A new salicylate synthase AmS is identified for siderophores biosynthesis in Amycolatopsis methanolica 239(T).

    Science.gov (United States)

    Xie, Feng; Dai, Shengwang; Shen, Jinzhao; Ren, Biao; Huang, Pei; Wang, Qiushui; Liu, Xueting; Zhang, Buchang; Dai, Huanqin; Zhang, Lixin

    2015-07-01

    Siderophores are important for the growth of bacteria or the applications in treatment of iron overload-associated diseases due to the iron-chelating property. Salicylate synthase played a key role in the biosynthesis of some NRPS-derived siderophores by the providing of an iron coordination moiety as the initial building block. A new salicylate synthase, namely AmS, was identified in the biosynthesis pathway of siderophore amychelin in Amycolatopsis methanolica 239(T), since it shunt chorismate, an integrant precursor, from primary to secondary metabolite flow. The amino acid sequence alignment and phylogenetic analysis showed that AmS grouped into a new cluster. In vitro assays of AmS revealed its wide temperature tolerance ranged from 0 to 40 °C and narrow pH tolerant ranged from 7.0 to 9.0. AmS was resistant to organic solvents and non-ionic detergents. Moreover, AmS converted chorismate to salicylate with K m of 129.05 μM, k cat of 2.20 min(-1) at optimal conditions, indicating its low substrate specificity and comparable velocity to reported counterparts (Irp9 and MbtI). These properties of AmS may improve the iron-seizing ability of A. methanolica to compete with its neighbors growing in natural environments. Most importantly, serine and cysteine residues were found to be important for the catalytic activity of AmS. This study presented AmS as a new cluster of salicylate synthase and the reaction mechanism and potential applications of salicylate synthase were highlighted as well.

  10. Production and Isolation of Amphibactin siderophores in Iron-stressed cultures of the marine bacteria Vibrio spp.

    Science.gov (United States)

    McLean, C.; Boiteau, R.; Bundy, R.; Gauglitz, J.; Repeta, D.

    2016-02-01

    Iron is an important micronutrient for marine microbes. Low concentrations of dissolved iron limit production in much of the ocean, putting pressure on microbial communities to develop efficient iron acquisition strategies. One such strategy is the production of siderophores, high affinity iron binding ligands, to facilitate iron uptake to meet their physiological iron quota. Recently, our lab has shown that amphibactins, siderophores with lipid side chains, are present in iron-deficient regions of the ocean. However, little is known about which organisms can utilize amphibactin bound iron. Here we describe a method to isolate amphibactins from laboratory cultures in order to identify the conditional stability constants and uptake rates of purified amphibactin compounds. We searched the National Center for Biotechnology Information database to identify microbial genomes containing homologous to the known amphibactin biosynthesis genes. Several of these strains were screened with high performance reverse-phase liquid chromatography electrospray ionization mass spectrometry (HPLC-ESIMS) to confirm amphibactin production. We then optimized amphibactin production for the strain Vibrio cyclitrophicus 1F53 under different shaking speeds and iron concentrations, using a chrome azurol S (CAS) assay to screen for siderophore abundance. Maximum production was found after 38 hours of shaking at 150-rpm, and with the addition of 10nM of desferrioxamine B to induce iron limitation. Amphibactins were extracted from the media by solid phase extraction and purified by reverse phase HPLC. The conditional stability constants for several amphibactins were then measured in seawater using competitive ligand exchange absorptive cathodic stripping voltammetry with salicylaldoxime as the added ligand. Future work will determine the uptake rates of these compounds by natural communities of marine bacteria, and give insight on the bioavailability of amphibactins in the marine environment.

  11. Pure optical dynamical color encryption

    Science.gov (United States)

    Mosso, Fabian; Tebaldi, Myrian; Fredy Barrera, John; Bolognini, Néstor; Torroba, Roberto

    2011-07-01

    We introduce a way to encrypt-decrypt a color dynamical phenomenon using a pure optical alternative. We split the three basic chromatic channels composing the input, and then each channel is processed through a 4f encoding method and a theta modulation applied to the each encrypted frame in every channel. All frames for a single channel are multiplexed. The same phase mask is used to encode all the information. Unlike the usual procedure we do not multiplex the three chromatic channels into a single encoding media, because we want to decrypt the information in real time. Then, we send to the decoding station the phase mask and the three packages each one containing the multiplexing of a single channel. The end user synchronizes and decodes the information contained in the separate channels. Finally, the decoding information is conveyed together to bring the decoded dynamical color phenomenon in real-time. We present material that supports our concepts.

  12. 76 FR 69284 - Pure Magnesium From China

    Science.gov (United States)

    2011-11-08

    ... COMMISSION Pure Magnesium From China Determination On the basis of the record \\1\\ developed in the subject... order on pure magnesium from China would be likely to lead to continuation or recurrence of material... USITC Publication 4274 (October 2011), entitled Pure Magnesium from China: Investigation No....

  13. Dual Target Search is Neither Purely Simultaneous nor Purely Successive.

    Science.gov (United States)

    Cave, Kyle R; Menneer, Tamaryn; Nomani, Mohammad S; Stroud, Michael J; Donnelly, Nick

    2017-08-31

    Previous research shows that visual search for two different targets is less efficient than search for a single target. Stroud, Menneer, Cave and Donnelly (2012) concluded that two target colours are represented separately based on modeling the fixation patterns. Although those analyses provide evidence for two separate target representations, they do not show whether participants search simultaneously for both targets, or first search for one target and then the other. Some studies suggest that multiple target representations are simultaneously active, while others indicate that search can be voluntarily simultaneous, or switching, or a mixture of both. Stroud et al.'s participants were not explicitly instructed to use any particular strategy. These data were revisited to determine which strategy was employed. Each fixated item was categorised according to whether its colour was more similar to one target or the other. Once an item similar to one target is fixated, the next fixated item is more likely to be similar to that target than the other, showing that at a given moment during search, one target is generally favoured. However, the search for one target is not completed before search for the other begins. Instead, there are often short runs of one or two fixations to distractors similar to one target, with each run followed by a switch to the other target. Thus, the results suggest that one target is more highly weighted than the other at any given time, but not to the extent that search is purely successive.

  14. Decryption of pure-position permutation algorithms

    Institute of Scientific and Technical Information of China (English)

    赵晓宇; 陈刚; 张亶; 王肖虹; 董光昌

    2004-01-01

    Pure position permutation image encryption algorithms, commonly used as image encryption investigated in this work are unfortunately frail under known-text attack. In view of the weakness of pure position permutation algorithm,we put forward an effective decryption algorithm for all pure-position permutation algorithms. First, a summary of the pure position permutation image encryption algorithms is given by introducing the concept of ergodic matrices. Then, by using probability theory and algebraic principles, the decryption probability of pure-position permutation algorithms is verified theoretically; and then, by defining the operation system of fuzzy ergodic matrices, we improve a specific decryption al-gorithm. Finally, some simulation results are shown.

  15. Colloidal Cutin-like Siderophoric Molecules Mobilize Plutonium from Contaminated Soils of the Rocky Flats Environmental Technology Site (RFETS), USA

    Energy Technology Data Exchange (ETDEWEB)

    Xu, C.; Santschi, P; Roberts, K; Zhong, J; Hatcher, P; Hung, C; Francis, A; Dodge, C; Honeyman, B

    2008-01-01

    Relatively recently, inorganic colloids have been invoked to reconcile the apparent contradictions between expectations based on classical dissolved-phase Pu transport and field observations of 'enhanced' Pu mobility (Kersting et al. Nature 1999, 397, 56-59). A new paradigm for Pu transport is mobilization and transport via biologically produced ligands. This study for the first time reports a new finding of Pu being transported, at sub-pM concentrations, by a cutin-like natural substance containing siderophore-like moieties and virtually all mobile Pu. Most likely, Pu is complexed by chelating groups derived from siderophores that are covalently bound to a backbone of cutin-derived soil degradation products, thus revealing the history of initial exposure to Pu. Features such as amphiphilicity and small size make this macromolecule an ideal collector for actinides and other metals and a vector for their dispersal. Cross-linking to the hydrophobic domains (e.g., by polysaccharides) gives this macromolecule high mobility and a means of enhancing Pu transport. This finding provides a new mechanism for Pu transport through environmental systems that would not have been predicted by Pu transport models.

  16. 嗜铁素功能研究概述%Research Progress on the Function of Siderophore

    Institute of Scientific and Technical Information of China (English)

    梁建根; 郝中娜; 王连平; 陶荣祥; 郑经武

    2011-01-01

    Siderophore produced by microbes and some crops in low-iron stress conditions is an organic compound in low molecular weight, which can combine ferric ion efficiently. Such material is an important bioactive substance and plays a key role in life metabolism. Otherwise, it is important to understand its function if it can be developed effectively. Therefore, the functions of siderophore in its biological control,toxicity, plant nutrition, acting carrier and other functions are reviewed, and the future directions of research are provided.%嗜铁素是微生物和部分作物在低铁应激条件下产生的一种能够高效率结合三价铁离子的低分子量有机化合物.该类物质是一种重要的生物活性物质,在生命代谢中起着非常重要的调节作用,但是能否被有效开发利用,了解其功能是关键.为此,笔者对其在生物防治、致毒、植物营养学、载体和其他五个方面的功能进行了系统概述,并就其未来的研究方向做了展望.

  17. Microbial mobilization of cesium from illite: Role of organic acids and siderophores

    Science.gov (United States)

    Hazotte, Alice; Peron, Olivier; Abdelouas, Abdesselam; Lebeau, Thierry

    2015-04-01

    Understanding the behavior of cesium (Cs) in soils and geological formations is interesting in the context of nuclear accidents and nuclear waste disposals. Indeed, this radionuclide with a 30-years half-life can contaminate crops and more generally the food chain. Cs with properties similar to potassium is known to be strongly accumulated in the clays of upper soil horizons. While excavation of contaminated soil cannot be feasible for the whole contaminated surfaces (huge volumes to be cleaned-up), in situ methods could provide a sustainable and low cost solution. Phytoextraction is one of a few solutions for in situ remediation of soils contaminated by trace elements and it preserves the quality of agricultural soils. However, many improvements are still needed to enhance phytoextraction effectiveness. The combination of bioaugmentation (soil inoculation with exogenous microorganisms) with phytoextraction is likely to increase the bioaccessibility of radionuclides and their accumulation in plants. The role of bacteria on soil-pollutants can be direct (direct metal complexation) and/or indirect (weathering of clays adsorbing Cs). This study aims to provide more specifically a mechanistic understanding of the bacterial mobilization of Cs from soil with the prospect of soil bioremediation. Bacterial metabolites of Pseudomonas fluorescens (ATCC 17400) were supplied to illite spiked with 0.1 and 1 mM of Cs. Purified siderophores including pyoverdine from P. fluorescens, or the whole metabolites from the bacterial culture supernatant were compared to low molecular weight organic acids (LMWOA) (citric and oxalic acids) at 0.04 mM, or synthetic chelants, i.e., acetohydroxamic acid (AHA) and desferrioxamine mesylate (DFOM) ranging from 50 µM up to 250 µM. The release of Cs and the structural alteration of illite (release of Al, Fe and Si) were monitored. When compared to the control, no release of Cs from illite was observed with LMWOA. On the contrary, a slight release

  18. Molecular binding mechanisms of aqueous cadmium and lead to siderophores, bacteria and mineral surfaces

    Science.gov (United States)

    Mishra, Bhoopesh

    Recent studies have shown that diverse groups of bacteria adsorb metals to similar extents and uptake can be modeled using a universal adsorption model. In this study, XAFS has been used to resolve whether binding sites determined for single species systems are responsible for adsorption in more complex natural bacterial assemblages. Results obtained from a series of XAFS experiments on pure Gram positive and Gram negative bacterial strains and consortia of bacteria as a function of pH and Cd loading suggests that every bacterial strain has a complex physiology and they are all slightly different from each other. Nevertheless from the metal adsorption chemistry point of view, the main difference between them lies in the site ratio of three fundamental sites only - carboxyl, phosphoryl and sulfide. Two completely different consortia of bacteria (obtained from natural river water, and soil system with severe organic contamination) were successfully modeled in the pH range 3.4--7.8 using the EXAFS models developed for single species systems. Results thus obtained can potentially have very high impact on the modeling of the complex bacterial systems in realistic geological settings, leading to further refinement and development of robust remediation strategies for metal contamination at macroscopic level. In another study, solution speciation of Pb and Cd with DFO-B has been examined using a combination of techniques (ICP, TOC, thermodynamic modeling and XAFS). Results indicate that Pb does not complex with DFO-B at all until about pH 3.5, but forms a totally caged structure at pH 7.5. At intermediate pH conditions, mixture of species (one and two hydroxamate groups complexed) is formed. Cd on the other hand, does not complex until pH 5, forms intermediate complexes at pH 8 and is totally chelated at pH 9. Further studies were conducted for Pb sorption to mineral surface kaolinite with and without DFO-B. In the absence of DFO-B, results suggest outer sphere and inner

  19. Bringing Planctomycetes into pure culture

    Directory of Open Access Journals (Sweden)

    Olga Maria Lage

    2012-12-01

    Full Text Available Planctomycetes have been known since the description of Planctomyces bekefii by Gimesi at the beginning of the twentieth century (1924, although the first axenic cultures were only obtained in the 1970s. Since then, eleven genera with fourteen species have been validly named and five candidatus genera belonging to the anaerobic ammonium oxidation, anammox bacteria have also been discovered. However, Planctomycetes diversity is much broader than these numbers indicate, as shown by environmental molecular studies. In recent years the authors have attempted to isolate and cultivate additional strains of Planctomycetes. This paper provides a summary of the isolation work that was carried out to obtain in pure culture Planctomycetes from several environmental sources. The following strains and planctomycetes have been successfully isolated: two freshwater strains from the sediments of an aquarium, which were described as a new genus and species, Aquisphaera giovannonii; several Rhodopirellula strains from the sediments of a water treatment recycling tank of a marine fish farm; and more than 140 planctomycetes from the biofilm community of macroalgae. This collection comprises several novel taxa that are being characterized and described. Improvements in the isolation methodology were made in order to optimize and enlarge the number of Planctomycetes isolated from the macroalgae. The existence of an intimate and an important relationship between planctomycetes and macroalgae reported before by molecular studies is therefore supported by culture dependent methods.

  20. A Single Blinded Randomized Controlled Study of the Effect of Conventional Oral Hypoglycemic Agents Versus Intensive Short-Term Insulin Therapy on Pure Tone Audiometry in Type II Diabetes Mellitus

    OpenAIRE

    2011-01-01

    Neuropathy is frequently a late complication of diabetes mellitus. Auditory neuropathy and microangiopathy of inner ear are the possible causes of hearing loss in diabetics. To study the correlation between glycaemic control and hearing threshold in patients with type 2 diabetes mellitus and to determine the differences of hearing threshold between groups treated with different modality. This single blind randomized controlled study was performed at the Department of Medicine and Department o...

  1. Model answers in pure mathematics for a-level students

    CERN Document Server

    Pratt, GA; Schofield, C W

    1967-01-01

    Model Answers in Pure Mathematics for A-Level Students provides a set of solutions that indicate what is required and expected in an Advanced Level examination in Pure Mathematics. This book serves as a guide to the length of answer required, layout of the solution, and methods of selecting the best approach to any particular type of math problem. This compilation intends to supplement, not replace, the normal textbook and provides a varied selection of questions for practice in addition to the worked solutions. The subjects covered in this text include algebra, trigonometry, coordinate geomet

  2. Social cognition in "pure" delusional disorder.

    Science.gov (United States)

    Bömmer, Isabel; Brüne, Martin

    2006-09-01

    Introduction. Delusional disorders are characterised by monothematic, "encapsulated" and incorrigible false beliefs and misinterpretations of social signals. Due to the rarity of cases with "pure" delusional disorder (DD) in clinical settings most studies of social cognition in delusional patients have focused on patients with paranoid schizophrenia. In the present study we sought to examine emotion recognition, theory of mind abilities, and pragmatic language comprehension in patients with delusional disorder. Methods. Social cognition was assessed in 21 patients recruited over a 3-year period who were diagnosed with delusional disorder, paranoid, erotomanic, or jealous type. In addition to an emotion recognition and theory of mind test battery, we included a novel German Proverb Test, which has been found indicative of subtle theory of mind deficits in schizophrenic patients. Executive functioning was assessed using the Wisconsin Card Sorting Test (WCST). Psychopathology was measured using the Positive and Negative Symptoms Scale (PANSS). Patients' task performance was compared to a group of 22 healthy control persons paralleled for verbal intelligence, education, and age. Results. Patients with DD made significantly more perseverative errors in the WCST, they performed more poorly on the theory of mind tasks and the proverb test, but were unimpaired in basic emotion recognition abilities relative to controls. When executive functioning was co-varied out, the group differences in theory of mind disappeared, whereas the greater propensity of patients with DD to interpret proverbs literally remained significant. Conclusions. In "pure" DD the basic social cognitive abilities appear to be preserved. Difficulties in metaphorical speech comprehension and executive functioning could, however, indicate more subtle social cognitive deficits in these patients.

  3. Pure variation and organic stratification.

    Science.gov (United States)

    Rosanvallon, Jérôme

    2012-09-01

    The fundamental problem posed by Darwin distinguishes his theory from any transformism of the past as well as any evolutionism to come: since variation is inherent to the living, it is a question of explaining, not at all why the living varies, but instead why the living does not vary in all directions to the point of constituting a continuum of forms varying ad infinitum. What limits and stabilizes this intrinsically unlimited variation, allowing certain forms to subsist and multiply to the detriment of others, is natural selection. This double principle of intrinsic variation/extrinsic selection constitutes a vector for the unification of reality that underlies Jean-Jacques Kupiec's ontophylogenesis as well as Deleuze and Guattari's global philosophy of Nature. Therefore, everything would potentially tend to incessantly vary. The work of Kupiec and others identifies an intrinsic random variation within ontogenesis itself. For Deleuze and Guattari, it is nothing but the figure, already selected by the organic stratum, of a more fundamental or pure variation. But, in fact, nothing really varies incessantly: everything undergoes a selective pressure according to which nothing subsists as such except what manages to endure through invariance (physical stratum) or reproduction (organic stratum). Thus, organic stratification only retains from variation what ensures and augments this reproduction. In this sense, every organism stratifies, i.e. submits to its imperative of subsistence and reproduction, a body without organs that varies in itself and always tends to escape the organism, for better (intensifications of life) or worse (cancerous pathologies). Copyright © 2012 Elsevier Ltd. All rights reserved.

  4. Pure versus hybrid: performance implications of Porter's generic strategies.

    Science.gov (United States)

    Kumar, K; Subramanian, R; Yauger, C

    1997-01-01

    This article identifies the strategic types in the hospital industry based on the hospital's use of Porter's generic strategies in their pure and hybrid forms. The article also examines differences in performance of hospitals across strategic types. Results indicate that hospitals that follow a focussed cost leadership strategy, in general, have superior performance on a variety of performance measures, while hospitals that use a combination of cost leadership and differentiation perform the poorest. Implications of findings for hospital administrators are also discussed.

  5. Campylobacter jejuni ferric-enterobactin receptor CfrA is TonB3 dependent and mediates iron acquisition from structurally different catechol siderophores

    Science.gov (United States)

    Naikare, Hemant; Butcher, James; Flint, Annika; Xu, Jide; Raymond, Kenneth N.; Stintzi, Alain

    2013-01-01

    Campylobacter jejuni NCTC11168 does not produce any endogenous siderophores of its own yet requires the CfrA enterobactin transporter for in vivo colonization. In addition, the genome of C. jejuni NCTC11168 contains three distinct TonB energy transduction systems, named TonB1, TonB2, and TonB3, that have not been tested for their role in siderophore uptake or their functional redundancy. We demonstrate that C. jejuni NCTC11168 transports ferric-enterobactin in an energy dependant manner that requires TonB3 for full activity with TonB1 showing partial functional redundancy. Moreover C. jejuni NCTC11168 can utilize a wide variety of structurally different catechol siderophores as sole iron sources during growth. This growth is solely dependent on the CfrA enterobactin transporter and highlights the wide range of substrates that this transporter can recognize. TonB3 is also required for growth on most catechol siderophores. Furthermore, either TonB1 or TonB3 is sufficient for growth on hemin or hemoglobin as a sole iron source demonstrating functional redundancy between TonB1 and TonB3. In vivo colonization assays with isogenic deletion mutants revealed that both TonB1 and TonB3 are required for chick colonization with TonB2 dispensable in this model. These results further highlight the importance of iron transport for efficient C. jejuni colonization. PMID:23702883

  6. Siderophore-mediated iron acquisition in the entomopathogenic bacterium Pseudomonas entomophila L48 and its close relative Pseudomonas putida KT2440.

    Science.gov (United States)

    Matthijs, Sandra; Laus, Georges; Meyer, Jean-Marie; Abbaspour-Tehrani, Kourosch; Schäfer, Mathias; Budzikiewicz, Herbert; Cornelis, Pierre

    2009-12-01

    Pseudomonas entomophila L48 is a recently identified entomopathogenic bacterium which, upon ingestion, kills Drosophila melanogaster, and is closely related to P. putida. The complete genome of this species has been sequenced and therefore a genomic, genetic and structural analysis of the siderophore-mediated iron acquisition was undertaken. P. entomophila produces two siderophores, a structurally new and unique pyoverdine and the secondary siderophore pseudomonine, already described in P. fluorescens species. Structural analysis of the pyoverdine produced by the closely related P. putida KT2440 showed that this strain produces an already characterised pyoverdine, but different from P. entomophila, and no evidence was found for the production of a second siderophore. Growth stimulation assays with heterologous pyoverdines demonstrated that P. entomophila is able to utilize a large variety of structurally distinct pyoverdines produced by other Pseudomonas species. In contrast, P. putida KT2440 is able to utilize only its own pyoverdine and the pyoverdine produced by P. syringae LMG 1247. Our data suggest that although closely related, P. entomophila is a more efficient competitor for iron than P. putida.

  7. Tame Kernels of Pure Cubic Fields

    Institute of Scientific and Technical Information of China (English)

    Xiao Yun CHENG

    2012-01-01

    In this paper,we study the p-rank of the tame kernels of pure cubic fields.In particular,we prove that for a fixed positive integer m,there exist infinitely many pure cubic fields whose 3-rank of the tame kernel equal to m.As an application,we determine the 3-rank of their tame kernels for some special pure cubic fields.

  8. Dissipation-induced pure Gaussian state

    CERN Document Server

    Koga, Kei

    2011-01-01

    This paper provides some necessary and sufficient conditions for a general Markovian Gaussian master equation to have a unique pure steady state. The conditions are described by simple matrix equations, thus they can be easily applied to the so-called environment engineering for pure Gaussian state preparation. In particular, it is shown that for any given pure Gaussian state we can actually construct a dissipative process yielding that state as the unique steady state.

  9. Fast word reading in pure alexia: "fast, yet serial".

    Science.gov (United States)

    Bormann, Tobias; Wolfer, Sascha; Hachmann, Wibke; Neubauer, Claudia; Konieczny, Lars

    2015-01-01

    Pure alexia is a severe impairment of word reading in which individuals process letters serially with a pronounced length effect. Yet, there is considerable variation in the performance of alexic readers with generally very slow, but also occasionally fast responses, an observation addressed rarely in previous reports. It has been suggested that "fast" responses in pure alexia reflect residual parallel letter processing or that they may even be subserved by an independent reading system. Four experiments assessed fast and slow reading in a participant (DN) with pure alexia. Two behavioral experiments investigated frequency, neighborhood, and length effects in forced fast reading. Two further experiments measured eye movements when DN was forced to read quickly, or could respond faster because words were easier to process. Taken together, there was little support for the proposal that "qualitatively different" mechanisms or reading strategies underlie both types of responses in DN. Instead, fast responses are argued to be generated by the same serial-reading strategy.

  10. Identification of a siderophore-producing bacterium Pseudomonas putida A3 and its growth-promoting effects on cucumber seedlings%高产嗜铁素恶臭假单胞菌A3菌株的鉴定及其对黄瓜的促生作用

    Institute of Scientific and Technical Information of China (English)

    刘艳萍; 滕松山; 赵蕾

    2011-01-01

    Bacterial strain A3 with high ability of producing siderophore was isolated from rhizosphere of greenhouse vegetables.The relative siderophore content was measured by chrome azurol S(CAS) assay and was identified using the Shenker's test.The results show that the relative siderophore content is 93.40% and the type is a kind of carboxylate type siderophore.In addition,the strain A3 also has a high ability of solubilizing phosphate and is able to produce indol-3-acetic(IAA) and 1-aminocyclopropane-1-carboxylate(ACC) deaminase under different substrates.According to the morphological,physiological-biochemical properties,API system and the 16S rRNA sequence analysis,the strain A3 is identified as Pseudomonas putida.The results from solution culture experiments reveals that compared to other treatments,the growth of cucumber seedlings is increased under the treatment of siderophore filtrate of strain A3 with 50 μmol/L FeCl3 in iron deficiency Hoagland solution,especially for shoot height,root length,leaf length,fresh mass and total leaf chlorophyll content.These may provide strong evidence that the siderophore produced by P.putida A3 is helpful to the growth promotion of cucumber seedlings under low iron conditions.%从大棚蔬菜根际土中分离到一株嗜铁素高产菌株A3,铬天青(CAS)法定量检测其嗜铁素相对含量达93.40%,Shenker's实验确定为羧酸型嗜铁素。在不同底物诱导下,该菌株可不同程度地产生吲哚乙酸(IAA)及1-氨基环丙烷-1-羧酸(ACC)脱氨酶,并具有一定的溶磷能力。根据形态特征、生理生化、API系统及16S rRNA基因序列分析,将菌株A3鉴定为恶臭假单胞菌(Pseudomonas putida)。在缺铁Hoagland营养液中添加难溶性铁及菌株A3嗜铁素发酵滤液的处理组,能够显著提高黄瓜幼苗的株高、根长、叶长、鲜重及叶绿素含量,表明菌株A3产生的嗜铁素在低铁条件下对黄瓜幼苗具有促生作用。

  11. Bacterial siderophores that evade or overwhelm lipocalin 2 induce hypoxia inducible factor 1α and proinflammatory cytokine secretion in cultured respiratory epithelial cells.

    Science.gov (United States)

    Holden, Victoria I; Lenio, Steven; Kuick, Rork; Ramakrishnan, Sadeesh K; Shah, Yatrik M; Bachman, Michael A

    2014-09-01

    Iron is essential for many cellular processes and is required by bacteria for replication. To acquire iron from the host, pathogenic Gram-negative bacteria secrete siderophores, including enterobactin (Ent). However, Ent is bound by the host protein lipocalin 2 (Lcn2), preventing bacterial reuptake of aferric or ferric Ent. Furthermore, the combination of Ent and Lcn2 (Ent+Lcn2) leads to enhanced secretion of interleukin-8 (IL-8) compared to that induced by either stimulus alone. Modified or structurally distinct siderophores, including yersiniabactin (Ybt) and glycosylated Ent (GlyEnt, or salmochelin), deliver iron to bacteria despite the presence of Lcn2. We hypothesized that the robust immune response to Ent and Lcn2 requires iron chelation rather than the Ent+Lcn2 complex itself and also can be stimulated by Lcn2-evasive siderophores. To test this hypothesis, cultured respiratory epithelial cells were stimulated with combinations of purified siderophores and Lcn2 and analyzed by gene expression microarrays, quantitative PCR, and cytokine immunoassays. Ent caused HIF-1α protein stabilization, induced the expression of genes regulated by hypoxia-inducible factor 1α (HIF-1α), and repressed genes involved in cell cycle and DNA replication, whereas Lcn2 induced expression of proinflammatory cytokines. Iron chelation by excess Ent or Ybt significantly increased Lcn2-induced secretion of IL-8, IL-6, and CCL20. Stabilization of HIF-1α was sufficient to enhance Lcn2-induced IL-6 secretion. These data indicate that respiratory epithelial cells can respond to bacterial siderophores that evade or overwhelm Lcn2 binding by increasing proinflammatory cytokine production.

  12. Measuring the entanglement of bipartite pure states

    CERN Document Server

    Sancho, J M

    2000-01-01

    The problem of the experimental determination of the amount of entanglement of a bipartite pure state is addressed. We show that measuring a single observable does not suffice to determine the entanglement of a given unknown pure state of two particles. Possible minimal local measuring strategies are discussed and a comparison is made on the basis of their best achievable precision.

  13. Fundamentals of the pure spinor formalism

    NARCIS (Netherlands)

    Hoogeveen, J.

    2010-01-01

    This thesis presents recent developments within the pure spinor formalism, which has simplified amplitude computations in perturbative string theory, especially when spacetime fermions are involved. Firstly the worldsheet action of both the minimal and the non-minimal pure spinor formalism is derive

  14. Influence of siderophore pyoverdine synthesis and iron-uptake on abiotic and biotic surface colonization of Pseudomonas putida S11.

    Science.gov (United States)

    Ponraj, Paramasivan; Shankar, Manoharan; Ilakkiam, Devaraj; Gunasekaran, Paramasamy

    2012-12-01

    Fluorescent pseudomonads produce a characteristic fluorescent pigment, pyoverdines as their primary siderophore for iron acquisition under iron-limiting conditions. Here, we report the identification of a random transposon mutant IST3 of Pseudomonas putida S11 showing tolerance to iron starvation stress condition and increased pyoverdine production. The insertion of the Tn5 transposon was found to be in pstS gene of pstSR operon encoding sensor histidine kinase protein of the two-component signal transduction system. A pyoverdine negative derivative of IST3 mutant constructed was sensitive to iron stress condition. It indicated that increased survival of IST3 under iron-limiting condition was due to higher pyoverdine production. The iron starvation tolerant mutant (IST3) exhibited enhanced pyoverdine-mediated iron uptake in minimal medium which significantly improved its biofilm formation, seed adhesion and competitive root colonization.

  15. Equilibrium Fe isotope fractionation between inorganic aqueous Fe(III) and the siderophore complex, Fe(III)-desferrioxamine B

    DEFF Research Database (Denmark)

    Dideriksen, Knud; Baker, Joel A.; Stipp, Susan Louise Svane

    2008-01-01

    In oxic oceans, most of the dissolved iron (Fe) exists as complexes with siderophore-like, strongly coordinating organic ligands. Thus, the isotope composition of the little amount of free inorganic Fe that is available for precipitation and preservation in the geological record may largely...... differently complexed Fe(III) pools were separated by addition of Na2CO3, which led to immediate precipitation of the inorganic Fe without causing significant dissociation of Fe-desferrioxamine complexes. Experiments using enriched 57Fe tracer showed that isotopic equilibration between the 57Fe......(III)-bearing environments, such as soils and rivers, and may, for example, largely control the Fe isotope composition of marine Fe–Mn crusts....

  16. Adsorption to metal oxides of the Pseudomonas aeruginosa siderophore pyoverdine and implications for bacterial biofilm formation on metals.

    Science.gov (United States)

    Upritchard, Hamish G; Yang, Jing; Bremer, Philip J; Lamont, Iain L; McQuillan, A James

    2007-06-19

    The initiation of biofilm formation is poorly understood, and in particular, the contribution of chemical bond formation between bacterial cells and metal surfaces has received little attention. We have previously used in situ infrared spectroscopy to show, during the initial stages of Pseudomonas aeruginosa biofilm formation, the formation of coordinate covalent bonds between titanium dioxide particle films and pyoverdine, a mixed catecholate and hydroxamate siderophore. Here we show using infrared spectroscopy that pyoverdine can also form covalent bonds with particle films of Fe2O3, CrOOH, and AlOOH. Adsorption to the metal oxides through the catechol-like 2,3-diamino-6,7-dihydroxyquinoline part of pyoverdine was most evident in the infrared spectrum of the adsorbed pyoverdine molecule. Weaker infrared absorption bands that are consistent with the hydroxamic acids of pyoverdine binding covalently to TiO2, Fe2O3, and AlOOH surfaces were also observed. The adsorption of pyoverdine to TiO2 and Fe2O3 surfaces showed a pH dependence that is indicative of the dominance of the catechol-like ligand of pyoverdine. Infrared absorption bands were also evident for pyoverdine associated with the cells of P. aeruginosa on TiO2 and Fe2O3 surfaces and were notably absent for genetically modified cells unable to synthesize or bind pyoverdine at the cell surface. These studies confirm the generality of pyoverdine-metal bond formation and suggest a wider involvement of siderophores in bacterial biofilm initiation on metals.

  17. Microbial Synthesis of the Forskolin Precursor Manoyl Oxide in an Enantiomerically Pure Form

    DEFF Research Database (Denmark)

    Nielsen, Morten Thrane; Ranberg, Johan Andersen; Christensen, Ulla

    2014-01-01

    )-manoyl oxide, a proposed intermediate in the biosynthesis of forskolin and other medically important labdane-type terpenoids. Process optimization enabled synthesis of enantiomerically pure (13R)-manoyl oxide as the sole metabolite providing a pure compound in just two steps with a yield of 10 mg/l. The work...

  18. AgraPure Mississippi Biomass Project

    Energy Technology Data Exchange (ETDEWEB)

    Blackwell,D.A; Broadhead, L.W.; Harrell, W.J.

    2006-03-31

    geographically located to be able to service a regional market. Other states have active incentive programs to promote the industry. Mississippi has adopted an incentive program for ethanol and biodiesel; however, the State legislature has not funded this program, leaving Mississippi at a disadvantage when compared to other states in developing the bio-based liquid fuel industry. With all relevant factors being considered, Mississippi offers several advantages to developing the biodiesel industry. As a result of AgraPure's work and plan development, a private investor group has built a 7,000 gallon per day facility in central Mississippi with plans to build a 10 million gallon per year biodiesel facility. The development of a thermochemical conversion/generation facility requires a much larger financial commitment, making a longer operational time necessary to recover the capital invested. Without a renewable portfolio standard to put a floor under the price, or the existence of a suitable steam host, the venture is not economically viable. And so, it has not met with the success of the biodiesel plan. While the necessary components regarding feedstocks, location, permitting and technology are all favorable; the market is not currently favorable for the development of this type of project. In this region there is an abundance of energy generation capacity. Without subsidies or a Mississippi renewable portfolio standard requiring the renewable energy to be produced from Mississippi raw materials, which are not available for the alternative energy source selected by AgraPure, this facility is not economically viable.

  19. Abnormal austenite-ferrite transformation behavior in pure iron

    Institute of Scientific and Technical Information of China (English)

    LIU Yongchang; F.Sommer; E.J. Mittemeijer

    2004-01-01

    The austenite → ferrite transformation is the most important reaction route in the manufacture of Fe-based materials. Here the austenite (γ) → ferrite (α)transformation of pure iron was systematically explored by high-resolution dilatometry. Abnormal transformation kinetics, multi-peak discontinuous reaction, was recognized in pure iron according to the variation of the ferrite-formation rate. The occurrence the one or the other type of γ→α trans formation strongly depends on the grain size: the transformation type changes from abnormal to normal (single-peak continuous reaction) with decreasing grain size. The inherent reason for the occurrence of abnormal transformation could be attributed to the repeated nucleation in front of the moving γ/α interface induced by the accumulation of elastic and plastic accommodation energy.

  20. Conformal pure radiation with parallel rays

    CERN Document Server

    Leistner, Thomas

    2011-01-01

    We define pure radiation metrics with parallel rays to be n-dimensional pseudo-Riemannian metrics that admit a parallel null line bundle K and whose Ricci tensor vanishes on vectors that are orthogonal to K. We give necessary conditions in terms of the Weyl, Cotton and Bach tensors for a pseudo-Riemannian metric to be conformal to a pure radiation metric with parallel rays. Then we derive conditions in terms of tractor calculus that are equivalent to the existence of a pure radiation metric with parallel rays in a conformal class. We also give an analogous result for n-dimensional pseudo-Riemannian pp-waves.

  1. Pure red cell aplasia and associated thymoma

    Directory of Open Access Journals (Sweden)

    Cristian Rosu

    2011-04-01

    Full Text Available Pure red cell aplasia is a rare cause of anemia, caused by an absence of red blood cell precursors in the bone marrow. It is usually a paraneoplastic syndrome, associated most commonly with large-cell granular lymphocyte leukemia but also thymoma. For patients who present both pure red cell aplasia and thymoma, thymectomy leads to an initial remission of the aplasia in 30% of cases. However, sustained remission may require the addition of medications such as corticosteroids, cyclospo­rine, or cyclophosphamide. We present a case of pure red cell aplasia associated with a thymoma in an otherwise healthy 80 year-old woman.

  2. Exact fluctuation-entanglement relation for bipartite pure states

    CERN Document Server

    Villaruel, Aura Mae B

    2015-01-01

    We identify a subsystem fluctuation (variance) that measures entanglement in an arbitrary bipartite pure state. This fluctuation is of an observable that generalizes the notion of polarization to an arbitrary N-level subsystem. We express this polarization fluctuation in terms of the order-2 Renyi entanglement entropy and a generalized concurrence. The fluctuation-entanglement relation presented here establishes a framework for experimentally measuring entanglement using Stern-Gerlach-type state selectors.

  3. A Hybrid Sensing Approach for Pure and Adulterated Honey Classification

    Directory of Open Access Journals (Sweden)

    Ammar Zakaria

    2012-10-01

    Full Text Available This paper presents a comparison between data from single modality and fusion methods to classify Tualang honey as pure or adulterated using Linear Discriminant Analysis (LDA and Principal Component Analysis (PCA statistical classification approaches. Ten different brands of certified pure Tualang honey were obtained throughout peninsular Malaysia and Sumatera, Indonesia. Various concentrations of two types of sugar solution (beet and cane sugar were used in this investigation to create honey samples of 20%, 40%, 60% and 80% adulteration concentrations. Honey data extracted from an electronic nose (e-nose and Fourier Transform Infrared Spectroscopy (FTIR were gathered, analyzed and compared based on fusion methods. Visual observation of classification plots revealed that the PCA approach able to distinct pure and adulterated honey samples better than the LDA technique. Overall, the validated classification results based on FTIR data (88.0% gave higher classification accuracy than e-nose data (76.5% using the LDA technique. Honey classification based on normalized low-level and intermediate-level FTIR and e-nose fusion data scored classification accuracies of 92.2% and 88.7%, respectively using the Stepwise LDA method. The results suggested that pure and adulterated honey samples were better classified using FTIR and e-nose fusion data than single modality data.

  4. Pure iron and other magnetic minerals in meteorites

    Science.gov (United States)

    Pechersky, D. M.; Markov, G. P.; Tsel'movich, V. A.

    2015-01-01

    The results of thermomagnetic and microprobe analyses of 37 samples from 25 different types of meteorite are analyzed with the focus on the presence of pure (nickel-free) iron in them. It is established that the metallic particles in the studied meteorites cluster in three isolated groups: (1) pure iron, (2) kamacite with mode 3-6% Ni, and (3) taenite with mode ˜50% Ni. The hiatuses in the Fe-Ni alloy compositions between these groups of magnetic grains contradict the Fe-Ni phase diagram, which predicts a continuous series of solid solutions in this system. This isolated distribution of the compositions of the metallic particles in the meteorites is reasonably accounted for by the specific properties of the melt (melts) and the processes of their crystallization and decomposition in space. It is suggested that pure iron in the meteorites could have been formed by either of two scenarios. According to the "primary," pure iron crystallizes from the melt, and according to the "secondary" scenario, it is produced by the decomposition of the solid solution.

  5. Atomic model of liquid pure Fe

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Using a θ-θX-ray diffractometer, the liquid structure of pure Fewas investigated and the diffraction intensity, structure factor, pair distribution function as well as the coordination number and atomic distance were obtained. The experimental results showed that there was also a pre-peak on the curve of the structure factor of liquid pure Fe. The pre-peak is a mark of medium-range order in melts. According to the characteristics of pre-peak, an atomic model of liquid pure Fe is constructed, namely, the structure of liquid pure Fe is a combination of clusters consisting of bcc cells with shared vertexes and other atoms with random dense atom distribution.

  6. Diphenylhydantoin-induced pure red cell aplasia.

    Science.gov (United States)

    Rusia, Usha; Malhotra, Purnima; Joshi, Panul

    2006-01-01

    Pure red cell aplasia is an uncommon complication of diphenylhydantoin therapy. It has not been reported in Indian literature. Awareness of the entity helps in establishing the cause of anaemia in these patients and alerts the physicians to the need of comprehensive haematological monitoring in these patients. A case of 58-year-old male who developed pure red cell aplasia following three months of diphenylhydantoin therapy is reported here.

  7. Expander Graphs in Pure and Applied Mathematics

    OpenAIRE

    Lubotzky, Alexander

    2011-01-01

    Expander graphs are highly connected sparse finite graphs. They play an important role in computer science as basic building blocks for network constructions, error correcting codes, algorithms and more. In recent years they have started to play an increasing role also in pure mathematics: number theory, group theory, geometry and more. This expository article describes their constructions and various applications in pure and applied mathematics.

  8. Dark fermentation on biohydrogen production: Pure culture.

    Science.gov (United States)

    Lee, Duu-Jong; Show, Kuan-Yeow; Su, Ay

    2011-09-01

    Biohydrogen is regarded as an attractive future clean energy carrier due to its high energy content and environmental-friendly conversion. While biohydrogen production is still in the early stage of development, there have been a variety of laboratory- and pilot-scale systems developed with promising potential. This work presents a review of literature reports on the pure hydrogen-producers under anaerobic environment. Challenges and perspective of biohydrogen production with pure cultures are also outlined.

  9. Rehabilitation of pure alexia: A review

    Science.gov (United States)

    Starrfelt, Randi; Ólafsdóttir, Rannveig Rós; Arendt, Ida-Marie

    2013-01-01

    Acquired reading problems caused by brain injury (alexia) are common, either as a part of an aphasic syndrome, or as an isolated symptom. In pure alexia, reading is impaired while other language functions, including writing, are spared. Being in many ways a simple syndrome, one would think that pure alexia was an easy target for rehabilitation efforts. We review the literature on rehabilitation of pure alexia from 1990 to the present, and find that patients differ widely on several dimensions, such as alexia severity and associated deficits. Many patients reported to have pure alexia in the reviewed studies, have associated deficits such as agraphia or aphasia and thus do not strictly conform to the diagnosis. Few studies report clear and generalisable effects of training, none report control data, and in many cases the reported findings are not supported by statistics. We can, however, tentatively conclude that Multiple Oral Re-reading techniques may have some effect in mild pure alexia where diminished reading speed is the main problem, while Tacile-Kinesthetic training may improve letter identification in more severe cases of alexia. There is, however, still a great need for well-designed and controlled studies of rehabilitation of pure alexia. PMID:23808895

  10. The major cow milk allergen Bos d 5 manipulates T-helper cells depending on its load with siderophore-bound iron.

    Directory of Open Access Journals (Sweden)

    Franziska Roth-Walter

    Full Text Available The mechanisms of allergic sensitization to milk are still elusive. The major allergen Bos d 5 belongs to the lipocalin-family and thus is able to transport numerous ligands. In this study we investigated its ability to bind to iron-siderophore complexes and tested the immune-modulatory properties of Bos d 5 in either forms. Structural and in silico docking analysis of Bos d 5 revealed that Bos d 5 is able to bind to iron via catechol-based flavonoids (quercetin, myricetin, luteolin that act as siderophores as confirmed by spectral-analysis and iron staining. Calculated dissociation constants of docking analyses were below 1 µM by virtual addition of iron. When incubated with human peripheral blood mononuclear cells (PBMCs, only the apo-form of Bos d 5 led to an increase of CD4+positive cells and significantly elevated IL13 and IFNγ-levels. In contrast, holo-Bos d 5 decreased numbers of CD4 expressing cells and induced apoptosis. Taken together, our data give evidence that Bos d 5 is capable of binding iron via siderophores. Moreover, our data support for the first time the notion that the form of application (apo- or holo-form is decisive for the subsequent immune response. The apo-form promotes Th2 cells and inflammation, whereas the holo-form appears to be immunosuppressive.

  11. Nokia PureView oversampling technology

    Science.gov (United States)

    Vuori, Tero; Alakarhu, Juha; Salmelin, Eero; Partinen, Ari

    2013-03-01

    This paper describes Nokia's PureView oversampling imaging technology as well as the product, Nokia 808 PureView, featuring it. The Nokia PureView imaging technology is the combination of a large, super high resolution 41Mpix with high performance Carl Zeiss optics. Large sensor enables a pixel oversampling technique that reduces an image taken at full resolution into a lower resolution picture, thus achieving higher definition and light sensitivity. One oversampled super pixel in image file is formed by using many sensor pixels. A large sensor enables also a lossless zoom. If a user wants to use the lossless zoom, the sensor image is cropped. However, up-scaling is not needed as in traditional digital zooming usually used in mobile devices. Lossless zooming means image quality that does not have the digital zooming artifacts as well as no optical zooming artifacts like zoom lens system distortions. Zooming with PureView is also completely silent. PureView imaging technology is the result of many years of research and development and the tangible fruits of this work are exceptional image quality, lossless zoom, and superior low light performance.

  12. Pure plate bending in couple stress theories

    CERN Document Server

    Hadjesfandiari, Ali R; Dargush, Gary F

    2016-01-01

    In this paper, we examine the pure bending of plates within the framework of modified couple stress theory (M-CST) and consistent couple stress theory (C-CST). In this development, it is demonstrated that M-CST does not describe pure bending of a plate properly. Particularly, M-CST predicts no couple-stresses and no size effect for the pure bending of the plate into a spherical shell. This contradicts our expectation that couple stress theory should predict some size effect for such a deformation pattern. Therefore, this result clearly demonstrates another inconsistency of indeterminate symmetric modified couple stress theory (M-CST), which is based on considering the symmetric torsion tensor as the curvature tensor. On the other hand, the fully determinate skew-symmetric consistent couple stress theory (C-CST) predicts results for pure plate bending that tend to agree with mechanics intuition and experimental evidence. Particularly, C-CST predicts couple-stresses and size effects for the pure bending of the ...

  13. Dynamic recrystallization behavior of commercial pure aluminum

    Institute of Scientific and Technical Information of China (English)

    LI Hui-zhong; ZHANG Xin-ming; CHEN Ming-an; LIU Zi-juan

    2006-01-01

    The flow stress feature and microstructure evolvement of a commercial pure aluminum were investigated by compression on Gleeble-1500 dynamic materials test machine. Optical microscopy (OM) and transmission electron microscopy (TEM) were applied to analyze the deformation microstructure of the commercial pure aluminum.The results show that the flow stress tends to be constant after a peak value and the dynamic recovery occurs when the deformation temperatures is 220 ℃ with the strain rate of 0.01 s-1; while the dynamic recrystallization occurs when the deformation temperature is higher than 380 ℃, and the flow stress exhibits a single peak at 460 ℃ with different strain rates from 0.001 s-1 to 1 s-1, and continuous dynamic recrystallization and geometric dynamic recrystallization occur during the hot compression of the commercial pure aluminum.

  14. Conclusive discrimination among N equidistant pure states

    Energy Technology Data Exchange (ETDEWEB)

    Roa, Luis; Hermann-Avigliano, Carla; Salazar, R. [Departamento de Fisica, Universidad de Concepcion, Barrio Universitario, Casilla 160-C, Concepcion (Chile); Klimov, A. B. [Departamento de Fisica, Universidad de Guadalajara, Revolucion 1500, 44420 Guadalajara, Jalisco (Mexico)

    2011-07-15

    We find the allowed complex overlaps for N equidistant pure quantum states. The accessible overlaps define a petal-shaped area on the Argand plane. Each point inside the petal represents a set of N linearly independent pure states and each point on its contour represents a set of N linearly dependent pure states. We find the optimal probabilities of success of discriminating unambiguously in which of the N equidistant states the system is. We show that the phase of the involved overlap plays an important role in the probability of success. For a fixed overlap modulus, the success probability is highest for the set of states with an overlap with phase equal to zero. In this case, if the process fails, then the information about the prepared state is lost. For states with a phase different from zero, the information could be obtained with an error-minimizing measurement protocol.

  15. Pure neuritic leprosy: Current status and relevance

    Directory of Open Access Journals (Sweden)

    P Narasimha Rao

    2016-01-01

    Full Text Available Pure neuritic leprosy has always been an enigma due to its clinical and management ambiguities. Although only the Indian Association of Leprologist's classification recognizes 'pure neuritic leprosy' as a distinct sub group of leprosy, cases nonetheless are reported from various countries of Asia, Africa, South America and Europe, indicating its global relevance. It is important to maintain pure neuritic leprosy as a subgroup as it constitutes a good percentage of leprosy cases reported from India, which contributes to more than half of global leprosy numbers. Unfortunately, a high proportion of these patients present with Grade 2 disability at the time of initial reporting itself due to the early nerve involvement. Although skin lesions are absent by definition, when skin biopsies were performed from the skin along the distribution of the affected nerve, a proportion of patients demonstrated leprosy pathology, revealing sub-clinical skin involvement. In addition on follow-up, skin lesions are noted to develop in up to 20% of pure neuritic leprosy cases, indicating its progression to manifest cutaneous disease. Over the decades, the confirmation of diagnosis of pure neuritic leprosy has been subjective, however, with the arrival and use of high-resolution ultrasonography (HRUS for nerve imaging, we have a tool not only to objectively measure and record the nerve thickening but also to assess the morphological alterations in the nerve including echo texture, fascicular pattern and vascularity. Management of pure neuritic leprosy requires multidrug therapy along with appropriate dose of systemic corticosteroids, for both acute and silent neuritis. Measures for pain relief, self-care of limbs and physiotherapy are important to prevent as well as manage disabilities in this group of patients.

  16. Pure neuritic leprosy: Current status and relevance.

    Science.gov (United States)

    Rao, P Narasimha; Suneetha, Sujai

    2016-01-01

    Pure neuritic leprosy has always been an enigma due to its clinical and management ambiguities. Although only the Indian Association of Leprologist's classification recognizes 'pure neuritic leprosy' as a distinct sub group of leprosy, cases nonetheless are reported from various countries of Asia, Africa, South America and Europe, indicating its global relevance. It is important to maintain pure neuritic leprosy as a subgroup as it constitutes a good percentage of leprosy cases reported from India, which contributes to more than half of global leprosy numbers. Unfortunately, a high proportion of these patients present with Grade 2 disability at the time of initial reporting itself due to the early nerve involvement. Although skin lesions are absent by definition, when skin biopsies were performed from the skin along the distribution of the affected nerve, a proportion of patients demonstrated leprosy pathology, revealing sub-clinical skin involvement. In addition on follow-up, skin lesions are noted to develop in up to 20% of pure neuritic leprosy cases, indicating its progression to manifest cutaneous disease. Over the decades, the confirmation of diagnosis of pure neuritic leprosy has been subjective, however, with the arrival and use of high-resolution ultrasonography (HRUS) for nerve imaging, we have a tool not only to objectively measure and record the nerve thickening but also to assess the morphological alterations in the nerve including echo texture, fascicular pattern and vascularity. Management of pure neuritic leprosy requires multidrug therapy along with appropriate dose of systemic corticosteroids, for both acute and silent neuritis. Measures for pain relief, self-care of limbs and physiotherapy are important to prevent as well as manage disabilities in this group of patients.

  17. Comparison of Diesel Engine Characteristic Using Pure Coconut Oil, Pure Palm Oil, and Pure Jatropha Oil as Fuel

    Directory of Open Access Journals (Sweden)

    Iman K. Reksowardojo

    2009-01-01

    Full Text Available Diesel engine can be operated on either pure plant oil (PPO oil or biodiesel. Biodiesel production process is expensive due to many stages of processes, while PPO has a lower cost of production, lower energy consumption, and simpler process. There are several potential biofuel resources in Indonesia such as coconut, palm, and jatropha. They are tropical plants with large amonts of their quantity. Experiment was conducted in 17 hours engine running test (endurance test with various operating cycle conditions. Test fuels are pure coconut oil (PCO, pure palm oil (PPaO, pure jatropha oil (PJO, and diesel fuel (DF as a datum. Each PPO blends with diesel fuel with composition 50%-volume. As a result, PCO has higher BSFC (10% before endurance test in comparison with diesel fuel, also PPaO (13% and PJO (27% show a similar condition. Surprisingly, all PPO have BSFC almost similar with DF after endurance test due to decreasing of engine components friction. On the other hand, PPO produces more uncompleted combustion than DF. Phosporus content has major responsibility of deposit growth. PCO, PPaO, and PJO result more engine deposits in comparison with DF, which accounts for 139,7%, 232,9%, and 288,9% respectively. Based on wear analysis, PCO has the best antiwear property among test fuels, whereas the worst is DF.

  18. Effect of ionic strength on ligand exchange kinetics between a mononuclear ferric citrate complex and siderophore desferrioxamine B

    Science.gov (United States)

    Ito, Hiroaki; Fujii, Manabu; Masago, Yoshifumi; Waite, T. David; Omura, Tatsuo

    2015-04-01

    The effect of ionic strength (I) on the ligand exchange reaction between a mononuclear ferric citrate complex and the siderophore, desferrioxamine B (DFB), was examined in the NaCl concentration range of 0.01-0.5 M, particularly focusing on the kinetics and mechanism of ligand exchange under environmentally relevant conditions. Overall ligand exchange rate constants were determined by spectrophotometrically measuring the time course of ferrioxamine B formation at a water temperature of 25 °C, pH 8.0, and citrate/Fe molar ratios of 500-5000. The overall ligand exchange rate decreased by 2-11-fold (depending on the citrate/Fe molar ratios) as I increased from approximately 0.01 to 0.5 M. In particular, a relatively large decrease was observed at lower I (dissociation of citrate from the parent complexes) dominates in ferrioxamine formation under the experimental conditions used. The model also predicts that the higher rate of ligand exchange at lower I is associated with the decrease in the ferric dicitrate complex stability because of the relatively high electrical repulsion between ferric monocitrate and free citrate at lower I (note that the reactivity of ferric dicitrate with DFB is smaller than that for the monocitrate complex). Overall, the findings of this study contribute to the understanding of the potential effect of I on ligand exchange kinetics in natural waters and provide fundamental knowledge on iron transformation and bioavailability.

  19. Synthesis of chromone, quinolone, and benzoxazinone sulfonamide nucleosides as conformationally constrained inhibitors of adenylating enzymes required for siderophore biosynthesis.

    Science.gov (United States)

    Engelhart, Curtis A; Aldrich, Courtney C

    2013-08-02

    MbtA catalyzes the first committed step of mycobactin biosynthesis in Mycobacterium tuberculosis (Mtb) and is responsible for the incorporation of salicylic acid into the mycobactin siderophores. 5'-O-[N-(Salicyl)sulfamoyl]adenosine (Sal-AMS) is an extremely potent nucleoside inhibitor of MbtA that possesses excellent activity against whole-cell Mtb but suffers from poor bioavailability. In an effort to improve the bioavailability, we have designed four conformationally constrained analogues of Sal-AMS that remove two rotatable bonds and the ionized sulfamate group on the basis of computational and structural studies. Herein we describe the synthesis, biochemical, and microbiological evaluation of chromone-, quinolone-, and benzoxazinone-3-sulfonamide derivatives of Sal-AMS. We developed new chemistry to assemble these three heterocycles from common β-ketosulfonamide intermediates. The synthesis of the chromone- and quinolone-3-sulfonamide intermediates features formylation of a β-ketosulfonamide employing dimethylformamide dimethyl acetal to afford an enaminone that can react intramolecularly with a phenol or intermolecularly with a primary amine via addition-elimination reaction(s). The benzoxazinone-3-sulfonamide was prepared by nitrosation of a β-ketosulfonamide followed by intramolecular nucleophilic aromatic substitution. Mitsunobu coupling of these bicyclic sulfonamides with a protected adenosine derivative followed by global deprotection provides a concise synthesis of the respective inhibitors.

  20. Pure word deafness and pure anarthria in a patient with frontotemporal dementia.

    Science.gov (United States)

    Iizuka, O; Suzuki, K; Endo, K; Fujii, T; Mori, E

    2007-04-01

    A 66-year-old right-handed man developed pure anarthria following pure word deafness. In addition to language disorders, his behavior gradually changed and finally included violence against his wife. Brain magnetic resonance imagings revealed atrophy of the left perisylvian area, which included the inferior half of the precentral gyrus and the upper portion of the superior temporal gyrus, consistent with frontotemporal dementia (FTD). It has been documented as either a disorder of expressive language or as an impaired understanding of word meaning. Unlike with pure anarthria, pure word deafness is not included in the clinical diagnostic current criteria for FTD. However, a large variety of language symptoms can appear in FTD according to the distribution of pathological changes in the frontotemporal cortices. This case suggests that pure word deafness could be a prodomal symptom of FTD.

  1. Are all maximally entangled states pure?

    CERN Document Server

    Cavalcanti, D; Terra-Cunha, M O

    2005-01-01

    In this Letter we study if all maximally entangled states are pure through several entanglement monotones. Our conclusions allow us to generalize the idea of monogamy of entanglement. Then we propose a polygamy of entanglement, which express that if a general multipartite state is maximally entangled it is necessarily factorized by any other system.

  2. Implicit Reading in Chinese Pure Alexia

    Science.gov (United States)

    Shan, Chunlei; Zhu, Renjing; Xu, Mingwei; Luo, Benyan; Weng, Xuchu

    2010-01-01

    A number of recent studies have shown that some patients with pure alexia display evidence of implicit access to lexical and semantic information about words that they cannot read explicitly. This phenomenon has not been investigated systematically in Chinese patients. We report here a case study of a Chinese patient who met the criteria for pure…

  3. Pure science and the problem of progress.

    Science.gov (United States)

    Douglas, Heather

    2014-06-01

    How should we understand scientific progress? Kuhn famously discussed science as its own internally driven venture, structured by paradigms. He also famously had a problem describing progress in science, as problem-solving ability failed to provide a clear rubric across paradigm change--paradigm changes tossed out problems as well as solving them. I argue here that much of Kuhn's inability to articulate a clear view of scientific progress stems from his focus on pure science and a neglect of applied science. I trace the history of the distinction between pure and applied science, showing how the distinction came about, the rhetorical uses to which the distinction has been put, and how pure science came to be both more valued by scientists and philosophers. I argue that the distinction between pure and applied science does not stand up to philosophical scrutiny, and that once we relinquish it, we can provide Kuhn with a clear sense of scientific progress. It is not one, though, that will ultimately prove acceptable. For that, societal evaluations of scientific work are needed.

  4. Binomial Squares in Pure Cubic Number Fields

    CERN Document Server

    Lemmermeyer, Franz

    2011-01-01

    Let K = Q(\\omega) with \\omega^3 = m be a pure cubic number field. We show that the elements\\alpha \\in K^\\times whose squares have the form a - \\omega form a group isomorphic to the group of rational points on the elliptic curve E_m: y^2= x^3 - m.

  5. Nigeria Journal of Pure and Applied Physics

    African Journals Online (AJOL)

    Nigeria Journal of Pure and Applied Physics (NJPAP) is a journal dedicated to the ... Variations of surface temparature with solar activity at two stations in the tropics ... Activation energy of psuedobinary alloy of Al-Bi-Se mixed systems · EMAIL ...

  6. Evolution of Pure States into Mixed States

    CERN Document Server

    Liu, J

    1993-01-01

    In the formulation of Banks, Peskin and Susskind, we show that one can construct evolution equations for the quantum mechanical density matrix $\\rho$ with operators which do not commute with hamiltonian which evolve pure states into mixed states, preserve the normalization and positivity of $\\rho$ and conserve energy. Furthermore, it seems to be different from a quantum mechanical system with random sources.

  7. Pure Gravitational Back-Reaction Observables

    CERN Document Server

    Tsamis, N C

    2013-01-01

    After discussing the various issues regarding and requirements on pure quantum gravitational observables in homogeneous-isotropic conditions, we construct a composite operator observable satisfying most of them. We also expand it to first order in the loop counting parameter and suggest it as a physical quantifier of gravitational back-reaction in an initially inflating cosmology.

  8. A fatal case of pure metaphyseal chondroblastoma.

    Science.gov (United States)

    Binesh, Fariba; Moghadam, Reza Nafisi; Abrisham, Jalil

    2013-08-23

    The chondroblastoma (CB) is a rare cartilaginous tumour; it represents less than 1% of all bone tumours. It is mostly localised at the level of the epiphysis of long bones. We report a fatal case of pure metaphyseal CB of the tibia in a 9-year-old boy whose pulmonary metastases developed soon after operative therapy of the primary tumour.

  9. MRI of autosomal dominant pure spastic paraplegia

    DEFF Research Database (Denmark)

    Krabbe, K; Nielsen, J E; Fallentin, E

    1997-01-01

    We examined 16 patients with autosomal dominant pure spastic paraplegia (HSP) and 15 normal controls matched for age and sex using MRI of the brain and spinal cord. Images were assessed qualitatively by two independent radiologists, blinded to the clinical diagnosis. Areas of the brain and corpus...

  10. Exploring the simplest purely baryonic decay processes

    CERN Document Server

    Geng, C Q; Rodrigues, Eduardo

    2016-01-01

    We propose to search for purely baryonic decay processes at the LHCb experiment. In particular, we concentrate on the decay $\\Lambda_b^0\\to p\\bar pn$, which is the simplest purely baryonic decay mode, with solely spin-1/2 baryons involved. We predict its decay branching ratio to be ${\\cal B}(\\Lambda_b^0\\to p\\bar pn)=(2.0^{+0.3}_{-0.2})\\times 10^{-6}$, which is sufficiently large to make the decay mode accessible to LHCb. Though not considered in general, purely baryonic decays could shed light on the puzzle of the baryon number asymmetry in the universe by means of a better understanding of the baryonic nature of our matter world. As such, they constitute a yet unexplored class of decay processes worth investigating. Our study can be extended to the purely baryonic decays of $\\Lambda_b^0\\to p\\bar p \\Lambda$, $\\Lambda_b^0\\to \\Lambda \\bar p\\Lambda$ and $\\Lambda_b^0\\to \\Lambda\\bar \\Lambda\\Lambda$, as well as other similar anti-triplet $b$-baryon decays, such as $\\Xi_b^{0,-}$.

  11. What lies beneath: a comparison of reading aloud in pure alexia and semantic dementia.

    Science.gov (United States)

    Woollams, Anna M; Hoffman, Paul; Roberts, Daniel J; Lambon Ralph, Matthew A; Patterson, Karalyn E

    2014-01-01

    Exaggerated effects of word length upon reading-aloud performance define pure alexia, but have also been observed in semantic dementia. Some researchers have proposed a reading-specific account, whereby performance in these two disorders reflects the same cause: impaired orthographic processing. In contrast, according to the primary systems view of acquired reading disorders, pure alexia results from a basic visual processing deficit, whereas degraded semantic knowledge undermines reading performance in semantic dementia. To explore the source of reading deficits in these two disorders, we compared the reading performance of 10 pure alexic and 10 semantic dementia patients, matched in terms of overall severity of reading deficit. The results revealed comparable frequency effects on reading accuracy, but weaker effects of regularity in pure alexia than in semantic dementia. Analysis of error types revealed a higher rate of letter-based errors and a lower rate of regularization responses in pure alexia than in semantic dementia. Error responses were most often words in pure alexia but most often nonwords in semantic dementia. Although all patients made some letter substitution errors, these were characterized by visual similarity in pure alexia and phonological similarity in semantic dementia. Overall, the data indicate that the reading deficits in pure alexia and semantic dementia arise from impairments of visual processing and knowledge of word meaning, respectively. The locus and mechanisms of these impairments are placed within the context of current connectionist models of reading.

  12. Comparison of hydrogen storage properties of pure Mg and milled pure Mg

    Indian Academy of Sciences (India)

    Myoung Youp Song; Young Jun Kwak; Seong Ho Lee; Hye Ryoung Park

    2014-06-01

    Hydrogen storage properties of pure Mg were studied at 593 K under 12 bar H2. In order to increase the hydriding and dehydriding rates, pure Mg was ground under hydrogen atmosphere (reactive mechanical grinding, RMG) and its hydrogen storage properties were subsequently investigated. Pure Mg absorbed hydrogen very slowly. At the number of cycles () of 1, pure Mg absorbed 0.05 wt% H for 5 min, 0.08 wt% H for 10 min and 0.29 wt% H for 60 min at 593 K under 12 bar H2. Activation was completed at the fifth cycle. At = 6, pure Mg absorbed 1.76 wt% H for 5 min, 2.17 wt% H for 10 min and 3.40 wt% H for 60 min. The activation of pure Mg after RMG was completed at the sixth cycle. At = 7, pure Mg after RMG absorbed 2.57 wt% H for 5 min, 3.21 wt% H for 10 min and 4.15 wt% H for 60 min.

  13. Entanglement-fluctuation relation for bipartite pure states

    Science.gov (United States)

    Villaruel, Aura Mae B.; Paraan, Francis N. C.

    2016-08-01

    We identify subsystem fluctuations (variances) that measure entanglement in an arbitrary bipartite pure state. These fluctuations are of observables that generalize the notion of polarization to an arbitrary N -level subsystem. We express this polarization fluctuation in terms of subsystem purity and other entanglement measures. The derived entanglement-fluctuation relation is evaluated for the ground states of a one-dimensional free-fermion gas and the Affleck-Kennedy-Lieb-Tasaki spin chain. Our results provide a framework for experimentally measuring entanglement using Stern-Gerlach-type state selectors.

  14. Purely hydrodynamic origin for swarming of swimming particles

    Science.gov (United States)

    Oyama, Norihiro; Molina, John Jairo; Yamamoto, Ryoichi

    2016-04-01

    Three-dimensional simulations with fully resolved hydrodynamics are performed to study the collective motion of model swimmers in bulk and confinement. Calculating the dynamic structure factor, we clarified that the swarming in bulk systems can be understood as a pseudoacoustic mode. Under confinement between flat parallel walls, this pseudoacoustic mode leads to a traveling wavelike motion. This swarming behavior is due purely to the hydrodynamic interactions between the swimmers and depends strongly on the type and strength of swimming (i.e., pusher or puller).

  15. Black Hole Attractors and Pure Spinors

    Energy Technology Data Exchange (ETDEWEB)

    Hsu, Jonathan P.; Maloney, Alexander; Tomasiello, Alessandro

    2006-02-21

    We construct black hole attractor solutions for a wide class of N = 2 compactifications. The analysis is carried out in ten dimensions and makes crucial use of pure spinor techniques. This formalism can accommodate non-Kaehler manifolds as well as compactifications with flux, in addition to the usual Calabi-Yau case. At the attractor point, the charges fix the moduli according to {Sigma}f{sub k} = Im(C{Phi}), where {Phi} is a pure spinor of odd (even) chirality in IIB (A). For IIB on a Calabi-Yau, {Phi} = {Omega} and the equation reduces to the usual one. Methods in generalized complex geometry can be used to study solutions to the attractor equation.

  16. New Perspective of High-Pure Silicon

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    @@The discovery in the middle of 1950s of the semi-con ducting properties of crystalline silicon has led to the impetu ous development of electric power facilities, the sun-power industry, and particularly, the microelectronic industry. The increasing demand for the high-pure silicon requires the production of synthetic crystals. The raw material for the syn thetic crystals, the so-called technical, or metallurgical silicon, is obtained from quartzite and quartz of superior quality by means of carbon-thermal reduction of silicon using an electric arc discharge. The complexity of the technological process, high cost of the related facilities, worsening environmental pollution, and narrow-mindedness of a raw material company are attributed to the rise in price of the final product-silicon plates, resulting in the fall in the production of high-pure silicon, normally used in sun storage batteries.

  17. Performance of broiler fed pure glycerine

    Directory of Open Access Journals (Sweden)

    Dássia Daiane Oliveira

    2014-02-01

    Full Text Available Two experiments evaluated the pure glycerin in broiler chicken diets. Experiment 1 was a metabolism test using total feces sampling method with 96 male chickens aging from 17 to 25 d when animals were fed on two treatments: diet1 = no glycerin and diet2 = 60g/kg of glycerin. The apparent metabolized energy measured 4015 kcal/kg and the apparent metabolized corrected for nitrogen balance was 3911 kcal/kg. Experiment 2 evaluated weight gains, feed intake and feed conversion in 480 chicks at 6, 20 and 34 d old fed on diets with 0, 40, 80 and 120 g/kg of glycerin. The results indicate that pure glycerin in chicken diets, as a source of energy must take into consideration the age of the animals and it may be added up to 120 g/kg, from 20 to 41 d of age.

  18. Pure and doped boron nitride nanotubes

    Directory of Open Access Journals (Sweden)

    M. Terrones

    2007-05-01

    Full Text Available More than ten years ago, it was suggested theoretically that boron nitride (BN nanotubes could be produced. Soon after, various reports on their synthesis appeared and a new area of nanotube science was born. This review aims to cover the latest advances related to the synthesis of BN nanotubes. We show that these tubes can now be produced in larger amounts and, in particular, that the chemistry of BN tubes appears to be very important to the production of reinforced composites with insulating characteristics. From the theoretical standpoint, we also show that (BN-C heteronanotubes could have important implications for nanoelectronics. We believe that BN nanotubes (pure and doped could be used in the fabrication of novel devices in which pure carbon nanotubes do not perform very efficiently.

  19. The pure relationship and below replacement fertility

    Directory of Open Access Journals (Sweden)

    David R. Hall

    2003-12-01

    interest from demographers. Despite the fact that researchers have extensively modeled recent demographic changes such as skyrocketing divorce rates, rising common-law union formation, delayed childbearing, and the decline to belowreplacement fertility levels, our understanding of the causes of these trends, and the possible connections between them remains theoretically fragmented and incomplete. The goal of this paper is to advance our understanding in this area by exploring the insights on modern family formation of prominent sociologist Anthony Giddens. Specifically, this study examines whether Giddens’ “pure relationship” concept can shed light on the trend toward very low fertility. The results of this inquiry suggest that couples in both marriages and common-law unions who conform to key aspects of Giddens pure relationship are more likely to have uncertain or below-replacement fertility intentions, and less likely to embrace above-replacement fertility goals.

  20. Compact objects in pure Lovelock theory

    CERN Document Server

    Dadhich, Naresh; Chilambwe, Brian

    2016-01-01

    For static fluid interiors of compact objects in pure Lovelock gravity (involving ony one $N$th order term in the equation) we establish similarity in solutions for the critical odd and even $d=2N+1, 2N+2$ dimensions. It turns out that in critical odd $d=2N+1$ dimensions, there can exist no bound distribution with a finite radius, while in critical even $d=2N+2$ dimensions, all solutions have similar behavior. For exhibition of similarity we would compare star solutions for $N =1, 2$ in $d=4$ Einstein and $d=6$ in Gauss-Bonnet theory respectively. We also obtain the pure Lovelock analogue of the Finch-Skea model.

  1. Effective pure states for bulk quantum computation

    Energy Technology Data Exchange (ETDEWEB)

    Knill, E.; Chuang, I.; Laflamme, R.

    1997-11-01

    In bulk quantum computation one can manipulate a large number of indistinguishable quantum computers by parallel unitary operations and measure expectation values of certain observables with limited sensitivity. The initial state of each computer in the ensemble is known but not pure. Methods for obtaining effective pure input states by a series of manipulations have been described by Gershenfeld and Chuang (logical labeling) and Corey et al. (spatial averaging) for the case of quantum computation with nuclear magnetic resonance. We give a different technique called temporal averaging. This method is based on classical randomization, requires no ancilla qubits and can be implemented in nuclear magnetic resonance without using gradient fields. We introduce several temporal averaging algorithms suitable for both high temperature and low temperature bulk quantum computing and analyze the signal to noise behavior of each.

  2. Development of Soybean Highly Pure Powdered Lecithin

    Institute of Scientific and Technical Information of China (English)

    Li Guihua; Gu Keren; Liang Shaohua

    2002-01-01

    This project makes use ofCondensed Soybean Phospholipids (CSP) toproduce highly pure powdered soybean lecithin.In the production technology, the first step is tode-oil by continuous y delivered mater al, higheffective mixing CSP with acetone and circularextraction. The second step is to centrifugallyseparate the lecithin miscellaneous liquid intomiscellaneous oil and solid-state lecithin withacetone. Then the mixing oil can be separatedinto crude oil and acetone by vaporization andcondensation. If the acetone contains too muchwater, it should be rectified for use circularly.Solid state lecithin with acetone can be madeinto highly pure powdered soybean lecithin(acetone insoluble matter >95% ) under thefollowing conditions: vacuum 750mmHg,temperature 60℃, time 20 minutes. Theproduction not only reaches the domestic andoversea quality index, but also has favorablehydrophilic property, which makes it becomenatural food additive and sanitarian nurture.

  3. Photoionizaton of Pure and Doped Helium Nanodroplets

    CERN Document Server

    Mudrich, M

    2014-01-01

    Helium nanodroplets, commonly regarded as the "nearly ideal spectroscopic matrix", are being actively studied for more than two decades now. While they mostly serve as cold, weakly perturbing and transparent medium for high-resolution spectroscopy of embedded molecules, their intrinsic quantum properties such as microscopic superfluidity still are subject-matter of current research. This article reviews recent work on pure and doped He nanodroplets using PI spectroscopy, an approach which has greatly advanced in the past years. While the notion of the ideal spectroscopic matrix mostly no longer holds in this context, photoionization techniques provide detailed insights into the photo-physical properties of pure and doped He nanodroplets and their relaxation dynamics following electronic excitation. Exploiting nowadays available high laser fields, even highly ionized states of matter on the nanoscale can be formed. Our particular focus lies on recent experimental progress including fs time-resolved spectroscop...

  4. Pure Sensory Stroke due to Lenticulocapsular Hemorrhage

    Institute of Scientific and Technical Information of China (English)

    杨益阶; 王国瑾; 潘松青

    2003-01-01

    @@ Pure sensory stroke (PSS) caused by lenticulo-capsular hemorrhage is rare. In this article, we re-ported 4 patients with PSS due to lenticulocapsularhemorrhage, including 3 men and 1 woman (mean age,58 years; range, 54 to 65 years), whose lesions couldbe identified by head computed tomographic (CT)scan and clinical findings correlated with the radio-logical lesions. All patients except 1 had hyperten-sion.

  5. Acquired pure red cell aplasia in children

    Directory of Open Access Journals (Sweden)

    Sujata R Dafale

    2012-01-01

    Full Text Available Acquired Pure Red Cell Aplasia (PRCA is a rare occurrence in children.This is a case of an eight year old girl child who developed acquired PRCA secondary to long term intake of sodium Valproate. This case is reported to review the causes of PRCA in children and to reconsider the use of drugs of longer duration in children and adults.

  6. Pure waterjet drilling of articular bone

    OpenAIRE

    Biskup, Christian; Dunnen, Steven den; Kraaij, Gert; Kerkhoffs, Gino M. M. J.; Tuijthof, Gabrielle J. M.

    2015-01-01

    The clinical application of waterjet technology for machining tough human tissues, such as articular bone, has advantages, as it produces clean sharp cuts without tissue heating. Additionally, water supply is possible via flexible tubing, which enables minimally invasive surgical access. This pilot study investigates whether drilling bony tissue with pure waterjets is feasible. Water pressures between 20 and 120 MPa with an orifice of 0.6 mm were used to create waterjets to drill blind boring...

  7. The Acinetobacter baumannii entA gene located outside the acinetobactin cluster is critical for siderophore production, iron acquisition and virulence.

    Directory of Open Access Journals (Sweden)

    William F Penwell

    Full Text Available Acinetobacter baumannii causes severe infections in compromised patients, who present an iron-limited environment that controls bacterial growth. This pathogen has responded to this restriction by expressing high-affinity iron acquisition systems including that mediated by the siderophore acinetobactin. Gene cloning, functional assays and biochemical tests showed that the A. baumannii genome contains a single functional copy of an entA ortholog. This gene, which is essential for the biosynthesis of the acinetobactin precursor 2,3-dihydroxybenzoic acid (DHBA, locates outside of the acinetobactin gene cluster, which otherwise harbors all genes needed for acinetobactin biosynthesis, export and transport. In silico analyses and genetic complementation tests showed that entA locates next to an entB ortholog, which codes for a putative protein that contains the isochorismatase lyase domain, which is needed for DHBA biosynthesis from isochorismic acid, but lacks the aryl carrier protein domain, which is needed for tethering activated DHBA and completion of siderophore biosynthesis. Thus, basF, which locates within the acinetobactin gene cluster, is the only fully functional entB ortholog present in ATCC 19606(T. The differences in amino acid length and sequences between these two EntB orthologs and the differences in the genetic context within which the entA and entB genes are found in different A. baumannii isolates indicate that they were acquired from different sources by horizontal transfer. Interestingly, the AYE strain proved to be a natural entA mutant capable of acquiring iron via an uncharacterized siderophore-mediated system, an observation that underlines the ability of different A. baumannii isolates to acquire iron using different systems. Finally, experimental infections using in vivo and ex vivo models demonstrate the role of DHBA and acinetobactin intermediates in the virulence of the ATCC 19606(T cells, although to a lesser extent when

  8. The Acinetobacter baumannii entA gene located outside the acinetobactin cluster is critical for siderophore production, iron acquisition and virulence.

    Science.gov (United States)

    Penwell, William F; Arivett, Brock A; Actis, Luis A

    2012-01-01

    Acinetobacter baumannii causes severe infections in compromised patients, who present an iron-limited environment that controls bacterial growth. This pathogen has responded to this restriction by expressing high-affinity iron acquisition systems including that mediated by the siderophore acinetobactin. Gene cloning, functional assays and biochemical tests showed that the A. baumannii genome contains a single functional copy of an entA ortholog. This gene, which is essential for the biosynthesis of the acinetobactin precursor 2,3-dihydroxybenzoic acid (DHBA), locates outside of the acinetobactin gene cluster, which otherwise harbors all genes needed for acinetobactin biosynthesis, export and transport. In silico analyses and genetic complementation tests showed that entA locates next to an entB ortholog, which codes for a putative protein that contains the isochorismatase lyase domain, which is needed for DHBA biosynthesis from isochorismic acid, but lacks the aryl carrier protein domain, which is needed for tethering activated DHBA and completion of siderophore biosynthesis. Thus, basF, which locates within the acinetobactin gene cluster, is the only fully functional entB ortholog present in ATCC 19606(T). The differences in amino acid length and sequences between these two EntB orthologs and the differences in the genetic context within which the entA and entB genes are found in different A. baumannii isolates indicate that they were acquired from different sources by horizontal transfer. Interestingly, the AYE strain proved to be a natural entA mutant capable of acquiring iron via an uncharacterized siderophore-mediated system, an observation that underlines the ability of different A. baumannii isolates to acquire iron using different systems. Finally, experimental infections using in vivo and ex vivo models demonstrate the role of DHBA and acinetobactin intermediates in the virulence of the ATCC 19606(T) cells, although to a lesser extent when compared to the

  9. The FupA/B protein uniquely facilitates transport of ferrous iron and siderophore-associated ferric iron across the outer membrane of Francisella tularensis live vaccine strain

    Science.gov (United States)

    Sen, Bhaswati

    2014-01-01

    Francisella tularensis is a highly infectious Gram-negative pathogen that replicates intracellularly within the mammalian host. One of the factors associated with virulence of F. tularensis is the protein FupA that mediates high-affinity transport of ferrous iron across the outer membrane. Together with its paralogue FslE, a siderophore–ferric iron transporter, FupA supports survival of the pathogen in the host by providing access to the essential nutrient iron. The FupA orthologue in the attenuated live vaccine strain (LVS) is encoded by the hybrid gene fupA/B, the product of an intergenic recombination event that significantly contributes to attenuation of the strain. We used 55Fe transport assays with mutant strains complemented with the different paralogues to show that the FupA/B protein of LVS retains the capacity for high-affinity transport of ferrous iron, albeit less efficiently than FupA of virulent strain Schu S4. 55Fe transport assays using purified siderophore and siderophore-dependent growth assays on iron-limiting agar confirmed previous findings that FupA/B also contributes to siderophore-mediated ferric iron uptake. These assays further demonstrated that the LVS FslE protein is a weaker siderophore–ferric iron transporter than the orthologue from Schu S4, and may be a result of the sequence variation between the two proteins. Our results indicate that iron-uptake mechanisms in LVS differ from those in Schu S4 and that functional differences in the outer membrane iron transporters have distinct effects on growth under iron limitation. PMID:24307666

  10. Les Problemes de l'alexie pure (Problems of Pure Alexia)

    Science.gov (United States)

    Kremin, Helgard

    1976-01-01

    This article reviews studies done on alexia and describes experiments designed to distinguish qualitatively between pure alexia (marked by the absence of oral and written problems) and other forms of alexia. (Text is in French.) (CLK)

  11. Models of pure CO2 and pure CH4 adsorption on the late paleozoic coals from the Kailuan Coalfield, Hebei, China

    Science.gov (United States)

    Dai, S.; Zhang, B.; Peng, S.; Zhang, X.; Chou, C.

    2009-01-01

    Isothermal adsorption experiments of pure CO2 and CH4 on different coals in rank (the No. 11 Coal from the Linnancang Mine and the No. 9 Coal from the Majiagou Mine) from the Kailuan Coalfield of Hebei Province, China, have been studied. Four different models (Langmuir, BET, D-R, and D-A) were used to fit the experimental data of CO2 and CH4 adsorption and their fitting degree were investigated. The results showed that the adsorption capacity of the Majiagou coal(Ro, ran = 1. 21%) is higher than that of the Linnancang coal (Ro, ran = 0. 58%). The adsorption capacity of CO2 is higher than that of CH4 on the same coal under the same pressure. The adsorption isotherms of pure CO 2 and pure CH4 on the Majiagou coal can be classified as Type I and their fitting errors of curves are very weak; thus the experimental data can be presented using the Langmuir isotherm. However, the adsorption of Linnancang coal is more complicated, and can be presented using D-A model because of its minimum error. Monolayer adsorption occurs during the adsorption of pure CO2 and pure CH4 on the No. 11 Coal and that of pure CH4 on the No. 9 Coal.

  12. Global empirical potentials from purely rotational measurements

    CERN Document Server

    Dattani, Nikesh S; Sun, Ming; Johnson, Erin R; Roy, Robert J Le; Ziurys, Lucy M

    2014-01-01

    The recent advent of chirped-pulse FTMW technology has created a plethora of pure rotational spectra for molecules for which no vibrational information is known. The growing number of such spectra demands a way to build empirical potential energy surfaces for molecules, without relying on any vibrational measurements. Using ZnO as an example, we demonstrate a powerful technique for efficiently accomplishing this. We first measure eight new ultra-high precision ($\\pm2$ kHz) pure rotational transitions in the $X$-state of ZnO. Combining them with previous high-precision ($\\pm50$ kHz) pure rotational measurements of different transitions in the same system, we have data that spans the bottom 10\\% of the well. Despite not using any vibrational information, our empirical potentials are able to determine the size of the vibrational spacings and bond lengths, with precisions that are more than three and two orders of magnitude greater, respectively, than the most precise empirical values previously known, and the mo...

  13. On constructing purely affine theories with matter

    Science.gov (United States)

    Cervantes-Cota, Jorge L.; Liebscher, D.-E.

    2016-08-01

    We explore ways to obtain the very existence of a space-time metric from an action principle that does not refer to it a priori. Although there are reasons to believe that only a non-local theory can viably achieve this goal, we investigate here local theories that start with Schrödinger's purely affine theory (Schrödinger in Space-time structure. Cambridge UP, Cambridge, 1950), where he gave reasons to set the metric proportional to the Ricci curvature aposteriori. When we leave the context of unified field theory, and we couple the non-gravitational matter using some weak equivalence principle, we can show that the propagation of shock waves does not define a lightcone when the purely affine theory is local and avoids the explicit use of the Ricci tensor in realizing the weak equivalence principle. When the Ricci tensor is substituted for the metric, the equations seem to have only a very limited set of solutions. This backs the conviction that viable purely affine theories have to be non-local.

  14. On constructing purely affine theories with matter

    CERN Document Server

    Cervantes-Cota, Jorge L

    2016-01-01

    We explore ways to obtain the very existence of a space-time metric from an action principle that does not refer to it a priori. Although there are reasons to believe that only a non-local theory can viably achieve this goal, we investigate here local theories that start with Schroedinger's purely affine theory [21], where he gave reasons to set the metric proportional to the Ricci curvature aposteriori. When we leave the context of unified field theory, and we couple the non-gravitational matter using some weak equivalence principle, we can show that the propagation of shock waves does not define a lightcone when the purely affine theory is local and avoids the explicit use of the Ricci tensor in realizing the weak equivalence principle. When the Ricci tensor is substituted for the metric, the equations seem to have only a very limited set of solutions. This backs the conviction that viable purely affine theories have to be non-local.

  15. Characterization of Klebsiella terrigena strains from humans: haemagglutinins, serum resistance, siderophore synthesis, and serotypes.

    Science.gov (United States)

    Podschun, R; Fischer, A; Ullmann, U

    2000-08-01

    Klebsiella terrigena is very rarely isolated from humans; as yet, its clinical significance is uncertain. The aim of the present study was to evaluate whether this species is able to express putative virulence factors. A total of 72 faecal (n = 50) and clinical (n = 22) K. terrigena isolates was investigated and compared with faecal and clinical strains of K. pneumoniae. Mannose-sensitive haemagglutination (MSHA) was observed less often in K. terrigena (64-74%) than in K. pneumoniae strains. In contrast, the incidence of mannose-resistant haemagglutinin indicative of type 3 pili (MR/K-HA) (77-94%), serum resistance properties (10-23%), and production of enterobactin (100%) was similar in both species. None of the K. terrigena isolates were able to synthesize aerobactin; however, the frequency of aerobactin synthesis in K. pneumoniae was also only 5%. Serotyping showed capsular types K5 and K70 to be predominant. The virulence-associated serotype K2 was common in both K. terrigena and K. pneumoniae isolates. Taken together, the present results suggest that K. terrigena and K. pneumoniae are indistinguishable with respect to the expression of virulence factors.

  16. Solid-to-solid oxidation of a vanadium(IV) to a vanadium(V) compound: chemisty of a sulfur-containing siderophore.

    Science.gov (United States)

    Chatterjee, Pabitra B; Crans, Debbie C

    2012-09-03

    Visible light facilitates a solid-to-solid photochemical aerobic oxidation of a hunter-green microcrystalline oxidovanadium(IV) compound (1) to form a black powder of cis-dioxidovanadium(V) (2) at ambient temperature. The siderophore ligand pyridine-2,6-bis(thiocarboxylic acid), H(2)L, is secreted by a microorganism from the Pseudomonas genus. This irreversible transformation of a metal monooxo to a metal dioxo complex in the solid state in the absence of solvent is unprecedented. It serves as a proof-of-concept reaction for green chemistry occurring in solid matrixes.

  17. Motivations behind "Bullies Then Offenders" versus "Pure Bullies": Further Suggestions for Anti-Bully Education and Practice

    Science.gov (United States)

    Johnston, Pattie; Tankersley, Merrie; Joenson, Trevor; Hupp, Mikey; Buckley, Jennifer; Redmond-McGowan, Margaret; Zanzinger, Allison; Poirier, Alex; Walsh, Abigail

    2014-01-01

    Cyber-bullying has become increasingly problematic in academic settings including universities and colleges. The bullying literature has been expanding investigation of the bully behaviors and has identified four bully types to include pure offender, pure victim, offender and victim, neither-offender-nor-victim. The majority of research has…

  18. Motivations behind "Bullies Then Offenders" versus "Pure Bullies": Further Suggestions for Anti-Bully Education and Practice

    Science.gov (United States)

    Johnston, Pattie; Tankersley, Merrie; Joenson, Trevor; Hupp, Mikey; Buckley, Jennifer; Redmond-McGowan, Margaret; Zanzinger, Allison; Poirier, Alex; Walsh, Abigail

    2014-01-01

    Cyber-bullying has become increasingly problematic in academic settings including universities and colleges. The bullying literature has been expanding investigation of the bully behaviors and has identified four bully types to include pure offender, pure victim, offender and victim, neither-offender-nor-victim. The majority of research has…

  19. Pure transperitoneal laparoscopic correction of retrocaval ureter

    Institute of Scientific and Technical Information of China (English)

    DING Guo-qing; XU Li-wei; LI Xin-de; LI Gong-hui; YU Yan-lan; YU Da-min; ZHANG Zhi-gen

    2012-01-01

    Background Retrocaval ureter is a rare congenital abnormality.Operative repair is always suggested in cases of significant functional obstruction.Laparoscopic procedures have been employed as the minimally invasive therapeutic option for retrocaval ureter.However,the laparoscopic techniques for retrocaval ureter might be technically challenging to some surgeons.The aim of this article was to present our experience and surgical techniques of pure transperitoneal laparoscopic pyelopyelostomy and ureteroureterostomy in nine patients with retrocaval ureter.Methods A total of nine patients of retrocaval ureter underwent pure laparoscopic pyelopyelostomy or ureteroureterostomy.The operation was performed with the patients placed in the 70-degree lateral decubitus position via a three port transperitoneal approach with two 10-mm and one 5-mm ports.The distal part of the dilated renal pelvis was transected at the ureteropelvic junction and the ureter was relocated anterior to the inferior vena cava.The tension-free pyeloureteral or ureteroureteral anastomosis was completed with the intracorporal freehand suturing and in situ knot-tying techniques combined with interrupted and continuous fashion.A double J ureteral stent was inserted in an antegrade manner during laparoscopy.Intravenous urography or computerized tomography and renal ultrasonography were performed after 3 months postoperatively.Results All operations were completed laparoscopically,and no open conversion was required.The mean operative time was 135 minutes (range,70-250 minutes),with minimal blood loss (less than 60 ml).No intra-operative complications or significant bleeding occurred.All patients presented mild postoperative pain and quick convalescence.The symptoms disappeared and hydronephrosis decreased substantially after surgery.Conclusions Pure transperitoneal laparoscopic correction for retrocaval ureter was associated with an excellent outcome,minimal invasiveness and short hospital stay.It is

  20. Needleless Electrospinning of Pure and Blended Chitosan

    Science.gov (United States)

    Grimmelsmann, Nils; Homburg, Sarah Vanessa; Ehrmann, Andrea

    2017-08-01

    Chitosan is a biopolymer with bactericidal, fungicidal, hemostatic and other interesting properties. It can be used, e.g., in medical products, as a filter medium, in biotechnological purposes etc. For these possible applications, nanofiber mats with a large inner surface will be most efficient. This is why in a recent project, the electrospinning properties of pure chitosan as well as chitosan blended with poly(ethylene oxide) were investigated. Using a needleless nanospinning process, the technology under examination can be upscaled from lab to industrial scale, enabling direct transfer of the gained experiences to the intended application.

  1. Pure spinor equations to lift gauged supergravity

    Energy Technology Data Exchange (ETDEWEB)

    Rosa, Dario; Tomasiello, Alessandro [Dipartimento di Fisica, Università di Milano-Bicocca, and INFN, sezione di Milano-Bicocca,I-20126 Milano (Italy)

    2014-01-31

    We rewrite the equations for ten-dimensional supersymmetry in a way formally identical to a necessary and sufficient G-structure system in N=2 gauged supergravity, where all four-dimensional quantities are replaced by combinations of pure spinors and fluxes in the internal space. This provides a way to look for lifts of BPS solutions without having to reduce or even rewrite the ten-dimensional action. In particular this avoids the problem of consistent truncation, and the introduction of unphysical gravitino multiplets.

  2. Are all maximally entangled states pure?

    Science.gov (United States)

    Cavalcanti, D.; Brandão, F. G. S. L.; Terra Cunha, M. O.

    2005-10-01

    We study if all maximally entangled states are pure through several entanglement monotones. In the bipartite case, we find that the same conditions which lead to the uniqueness of the entropy of entanglement as a measure of entanglement exclude the existence of maximally mixed entangled states. In the multipartite scenario, our conclusions allow us to generalize the idea of the monogamy of entanglement: we establish the polygamy of entanglement, expressing that if a general state is maximally entangled with respect to some kind of multipartite entanglement, then it is necessarily factorized of any other system.

  3. Purely cubic action for string field theory

    Science.gov (United States)

    Horowitz, G. T.; Lykken, J.; Rohm, R.; Strominger, A.

    1986-01-01

    It is shown that Witten's (1986) open-bosonic-string field-theory action and a closed-string analog can be written as a purely cubic interaction term. The conventional form of the action arises by expansion around particular solutions of the classical equations of motion. The explicit background dependence of the conventional action via the Becchi-Rouet-Stora-Tyutin operator is eliminated in the cubic formulation. A closed-form expression is found for the full nonlinear gauge-transformation law.

  4. Synthesis of highly phase pure BSCCO superconductors

    Science.gov (United States)

    Dorris, S.E.; Poeppel, R.B.; Prorok, B.C.; Lanagan, M.T.; Maroni, V.A.

    1995-11-21

    An article and method of manufacture (Bi, Pb)-Sr-Ca-Cu-O superconductor are disclosed. The superconductor is manufactured by preparing a first powdered mixture of bismuth oxide, lead oxide, strontium carbonate, calcium carbonate and copper oxide. A second powdered mixture is then prepared of strontium carbonate, calcium carbonate and copper oxide. The mixtures are calcined separately with the two mixtures then combined. The resulting combined mixture is then subjected to a powder in tube deformation and thermal processing to produce a substantially phase pure (Bi, Pb)-Sr-Ca-Cu-O superconductor. 5 figs.

  5. Quantum correlations support probabilistic pure state cloning

    Energy Technology Data Exchange (ETDEWEB)

    Roa, Luis, E-mail: lroa@udec.cl [Departamento de Física, Universidad de Concepción, Casilla 160-C, Concepción (Chile); Alid-Vaccarezza, M.; Jara-Figueroa, C. [Departamento de Física, Universidad de Concepción, Casilla 160-C, Concepción (Chile); Klimov, A.B. [Departamento de Física, Universidad de Guadalajara, Avenida Revolución 1500, 44420 Guadalajara, Jalisco (Mexico)

    2014-02-01

    The probabilistic scheme for making two copies of two nonorthogonal pure states requires two auxiliary systems, one for copying and one for attempting to project onto the suitable subspace. The process is performed by means of a unitary-reduction scheme which allows having a success probability of cloning different from zero. The scheme becomes optimal when the probability of success is maximized. In this case, a bipartite state remains as a free degree which does not affect the probability. We find bipartite states for which the unitarity does not introduce entanglement, but does introduce quantum discord between some involved subsystems.

  6. Pure seminoma: A review and update

    Science.gov (United States)

    2011-01-01

    Pure seminoma is a rare pathology of the young adult, often discovered in the early stages. Its prognosis is generally excellent and many therapeutic options are available, especially in stage I tumors. High cure rates can be achieved in several ways: standard treatment with radiotherapy is challenged by surveillance and chemotherapy. Toxicity issues and the patients' preferences should be considered when management decisions are made. This paper describes firstly the management of primary seminoma and its nodal involvement and, secondly, the various therapeutic options according to stage. PMID:21819630

  7. [XX 'pure' gonadal dysgenesis and XYY syndrome].

    Science.gov (United States)

    Itoh, Naoki; Tsukamoto, Taiji

    2004-02-01

    XX 'pure' gonadal dysgenesis is a disease related to Turner's syndrome. Patients of this disease are characterized by normal female external genitalia, bilateral streak gonads, amenorrhea and sexual infantilism. Recently, it has been reported that point mutations of the FSH receptor gene may be one of cause of this disease. The relationship between criminal behavior and XYY syndrome is still controversial. Increased incidence of disomic sperm in 47,XYY males has been reported by fluorescent in situ hybridization(FISH). Genetic counseling should be done when they undergo intracytoplasmic sperm injection.

  8. Synthesis of pure Portland cement phases

    DEFF Research Database (Denmark)

    Wesselsky, Andreas; Jensen, Ole Mejlhede

    2009-01-01

    Pure phases commonly found in Portland cement clinkers are often used to test cement hydration behaviour in simplified experimental conditions. The synthesis of these phases is covered in this paper, starting with a description of phase relations and possible polymorphs of the four main phases...... in Portland cement, i.e. tricalcium silicate, dicalcium silicate, tricalcium aluminate and tetracalcium alumino ferrite. Details of the The process of solid state synthesis are is described in general including practical advice on equipment and techniques. Finally In addition, some exemplary mix compositions...

  9. Powder injection molding of pure titanium

    Institute of Scientific and Technical Information of China (English)

    GUO Shibo; DUAN Bohua; HE Xinbo; QU Xuanhui

    2009-01-01

    An improved wax-based binder was developed for powder injection molding of pure titanium. A critical powder loading of 69 vol.% and a pseudo-plastic flow behavior were obtained by the feedstock based on the binder. The injection molding, debinding, and sintering process were studied. An ideal control of carbon and oxygen contents was achieved by thermal debinding in vacuum atmosphere (10-3 Pa). The mechanical properties of as-sintered specimens were less than those of titanium made by the conventional press-sintering process. Good shape retention and ±0.04 mm dimension deviation were achieved.

  10. Study on pure silica core optical fibers

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    An optimal refractive index profile of pure silica core optical fiber (PSCF) was designed, in combination with the characters of the modified chemical vapor deposition (MCVD) process. Techniques of preform fabrication by a new furnace round heating MCVD process and fiber drawing process were reviewed. Difficulties in doping fluorine in silica, widening the depressed-index cladding and maintaining the index of fiber core were discussed. Methods used to overcome these difficulties were given at the same time. Additionally, the optimal refractive index profiles of PSCF were presented.

  11. Purely cubic action for string field theory

    Science.gov (United States)

    Horowitz, G. T.; Lykken, J.; Rohm, R.; Strominger, A.

    1986-01-01

    It is shown that Witten's (1986) open-bosonic-string field-theory action and a closed-string analog can be written as a purely cubic interaction term. The conventional form of the action arises by expansion around particular solutions of the classical equations of motion. The explicit background dependence of the conventional action via the Becchi-Rouet-Stora-Tyutin operator is eliminated in the cubic formulation. A closed-form expression is found for the full nonlinear gauge-transformation law.

  12. The Pure Virtual Braid Group Is Quadratic

    CERN Document Server

    Lee, Peter

    2011-01-01

    If an augmented algebra K over Q is filtered by powers of its augmentation ideal I, the associated graded algebra gr_I K need not in general be quadratic: although it is generated in degree 1, its relations may not be generated by homogeneous relations of degree 2. In this paper we give a criterion which is equivalent to gr_I K being quadratic. We apply this criterion to the group algebra of the pure virtual braid group (also known as the quasi-triangular group), and show that the corresponding associated graded algebra is quadratic.

  13. Purely Four-dimensional Viable Anomaly Mediation

    CERN Document Server

    Harnik, R; Pierce, A T; Harnik, Roni; Murayama, Hitoshi; Pierce, Aaron

    2002-01-01

    Anomaly mediation of supersymmetry breaking solves the supersymmetric flavor problem thanks to its ultraviolet-insensitivity. However, it suffers from two problems: sleptons have negative masses-squared, and there are likely bulk moduli that spoil the framework. Here, we present the first fully ultraviolet-insensitive model of anomaly mediation with positive slepton masses-squared in a purely four-dimensional framework. Our model is based on the additional D-term contributions to the sparticle masses of Arkani-Hamed, Kaplan, HM, and Nomura, and the conformal sequestering mechanism of Luty and Sundrum.

  14. Measure and integral with purely ordinal scales

    CERN Document Server

    Denneberg, Dieter

    2008-01-01

    We develop a purely ordinal model for aggregation functionals for lattice valued functions, comprising as special cases quantiles, the Ky Fan metric and the Sugeno integral. For modeling findings of psychological experiments like the reflection effect in decision behaviour under risk or uncertainty, we introduce reflection lattices. These are complete linear lattices endowed with an order reversing bijection like the reflection at 0 on the real interval $[-1,1]$. Mathematically we investigate the lattice of non-void intervals in a complete linear lattice, then the class of monotone interval-valued functions and their inner product.

  15. Electrostatic Precipitation in Nearly Pure Gaseous Nitrogen

    Science.gov (United States)

    Buhler, Charles; Calle, Carlos; Clements, Sid; Cox, Bobby; Ritz, Mindy

    2008-01-01

    Electrostatic precipitation was performed in a nearly pure gaseous nitrogen system as a possible remedy for black dust contaminant from high pressure 6000 psi lines at the NASA Kennedy Space Center. The results of a prototype electrostatic precipitator that was built and tested using nitrogen gas at standard atmospheric pressures is presented. High voltage pulsed waveforms are generated using a rotating spark gap system at 30 Hz. A unique dust delivery system utilizing the Venturi effect was devised that supplies a given amount of dust per unit time for testing purposes.

  16. Defective spatial imagery with pure Gerstmann's syndrome.

    Science.gov (United States)

    Carota, Antonio; Di Pietro, Marie; Ptak, Radek; Poglia, Davide; Schnider, Armin

    2004-01-01

    Gerstmann's syndrome comprises finger agnosia, peripheral agraphia, anarithmetia, and right-left confusion. We here report a single-case study of an 85-year-old ambidextrous man who exhibited pure Gerstmann's syndrome (i.e., without aphasia) 10 weeks after a stroke involving the angular gyrus in the left parietal lobe. We hypothesize that, in this case, the main cognitive denominator of Gerstmann's tetrad was a severe dysfunction in mental rotation and translation. This report provides further evidence for the spatial nature of Gerstmann's syndrome.

  17. Free Differential Algebras and Pure Spinor Action in IIB Superstring Sigma Models

    CERN Document Server

    Oda, Ichiro

    2011-01-01

    In this paper we extend to the case of IIB superstring sigma models the method proposed in hep-th/10023500 to derive the pure spinor approach for type IIA sigma models. In particular, starting from the (Free) Differential Algebra and superspace parametrization of type IIB supergravity, extended to include the BRST differential and all the ghosts, we derive the BRST transformations of fields and ghosts as well as the standard pure spinor constraints for the ghosts $\\lambda $ related to supersymmetry. Moreover, using the method first proposed by us, we derive the pure spinor action for type IIB superstrings in curved supergravity backgrounds (on shell), in full agreement with the action first obtained by Berkovits and Howe.

  18. Free differential algebras and pure spinor action in IIB superstring sigma models

    Science.gov (United States)

    Oda, Ichiro; Tonin, Mario

    2011-06-01

    In this paper we extend to the case of IIB superstring sigma models the method proposed in hep-th/10023500 to derive the pure spinor approach for type IIA sigma models. In particular, starting from the (Free) Differential Algebra and superspace parametrization of type IIB supergravity, extended to include the BRST differential and all the ghosts, we derive the BRST transformations of fields and ghosts as well as the standard pure spinor constraints for the ghosts λ related to supersymmetry. Moreover, using the method first proposed by us, we derive the pure spinor action for type IIB superstrings in curved supergravity backgrounds (on shell), in full agreement with the action first obtained by Berkovits and Howe.

  19. A putative siderophore-interacting protein from the marine bacterium Shewanella frigidimarina NCIMB 400: cloning, expression, purification, crystallization and X-ray diffraction analysis

    Energy Technology Data Exchange (ETDEWEB)

    Trindade, Inês B.; Fonseca, Bruno M. [Universidade Nova de Lisboa, Avenida da República (EAN), 2780-157 Oeiras (Portugal); Matias, Pedro M. [Universidade Nova de Lisboa, Avenida da República (EAN), 2780-157 Oeiras (Portugal); Instituto de Biologia Experimental e Tecnológica (iBET), Apartado 12, 2780-901 Oeiras (Portugal); Louro, Ricardo O.; Moe, Elin, E-mail: elinmoe@itqb.unl.pt [Universidade Nova de Lisboa, Avenida da República (EAN), 2780-157 Oeiras (Portugal)

    2016-08-09

    The gene encoding a putative siderophore-interacting protein from the marine bacterium S. frigidimarina was successfully cloned, followed by expression and purification of the gene product. Optimized crystals diffracted to 1.35 Å resolution and preliminary crystallographic analysis is promising with respect to structure determination and increased insight into the poorly understood molecular mechanisms underlying iron acquisition. Siderophore-binding proteins (SIPs) perform a key role in iron acquisition in multiple organisms. In the genome of the marine bacterium Shewanella frigidimarina NCIMB 400, the gene tagged as SFRI-RS12295 encodes a protein from this family. Here, the cloning, expression, purification and crystallization of this protein are reported, together with its preliminary X-ray crystallographic analysis to 1.35 Å resolution. The SIP crystals belonged to the monoclinic space group P2{sub 1}, with unit-cell parameters a = 48.04, b = 78.31, c = 67.71 Å, α = 90, β = 99.94, γ = 90°, and are predicted to contain two molecules per asymmetric unit. Structure determination by molecular replacement and the use of previously determined ∼2 Å resolution SIP structures with ∼30% sequence identity as templates are ongoing.

  20. The structure of MbtI from Mycobacterium tuberculosis, the first enzyme in the biosynthesis of the siderophore mycobactin, reveals it to be a salicylate synthase.

    Science.gov (United States)

    Harrison, Anthony J; Yu, Minmin; Gårdenborg, Therés; Middleditch, Martin; Ramsay, Rochelle J; Baker, Edward N; Lott, J Shaun

    2006-09-01

    The ability to acquire iron from the extracellular environment is a key determinant of pathogenicity in mycobacteria. Mycobacterium tuberculosis acquires iron exclusively via the siderophore mycobactin T, the biosynthesis of which depends on the production of salicylate from chorismate. Salicylate production in other bacteria is either a two-step process involving an isochorismate synthase (chorismate isomerase) and a pyruvate lyase, as observed for Pseudomonas aeruginosa, or a single-step conversion catalyzed by a salicylate synthase, as with Yersinia enterocolitica. Here we present the structure of the enzyme MbtI (Rv2386c) from M. tuberculosis, solved by multiwavelength anomalous diffraction at a resolution of 1.8 A, and biochemical evidence that it is the salicylate synthase necessary for mycobactin biosynthesis. The enzyme is critically dependent on Mg2+ for activity and produces salicylate via an isochorismate intermediate. MbtI is structurally similar to salicylate synthase (Irp9) from Y. enterocolitica and the large subunit of anthranilate synthase (TrpE) and shares the overall architecture of other chorismate-utilizing enzymes, such as the related aminodeoxychorismate synthase PabB. Like Irp9, but unlike TrpE or PabB, MbtI is neither regulated by nor structurally stabilized by bound tryptophan. The structure of MbtI is the starting point for the design of inhibitors of siderophore biosynthesis, which may make useful lead compounds for the production of new antituberculosis drugs, given the strong dependence of pathogenesis on iron acquisition in M. tuberculosis.

  1. Crystallization and preliminary X-ray crystallographic analysis of MbtI, a protein essential for siderophore biosynthesis in Mycobacterium tuberculosis

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, Anthony J. [School of Biological Sciences, University of Auckland, Private Bag 92-019, Auckland (New Zealand); Centre for Molecular Biodiscovery, University of Auckland, Private Bag 92-019, Auckland (New Zealand); Ramsay, Rochelle J. [Centre for Molecular Biodiscovery, University of Auckland, Private Bag 92-019, Auckland (New Zealand); Baker, Edward N.; Lott, J. Shaun, E-mail: s.lott@auckland.ac.nz [School of Biological Sciences, University of Auckland, Private Bag 92-019, Auckland (New Zealand); Centre for Molecular Biodiscovery, University of Auckland, Private Bag 92-019, Auckland (New Zealand)

    2005-01-01

    MbtI, the putative isochorismate synthase essential for siderophore biosynthesis in M. tuberculosis, has been crystallized. Diffraction data have been collected to 1.8 Å resolution. Mycobacterium tuberculosis, the causative agent of tuberculosis, depends on the secretion of salicylate-based siderophores called mycobactins for the acquisition of extracellular iron, which is essential for the growth and virulence of the bacterium. The protein MbtI is thought to be the isochorismate synthase enzyme responsible for the conversion of chorismate to isochorismate, the first step in the salicylate production required for mycobactin biosynthesis. MbtI has been overexpressed in Escherichia coli, purified and crystallized. The crystals diffract to a maximum resolution of 1.8 Å. They belong to space group P2{sub 1}2{sub 1}2{sub 1}, with unit-cell parameters a = 51.8, b = 163.4, c = 194.9 Å, consistent with the presence of either two, three or four molecules in the asymmetric unit.

  2. On the importance of PURE - Public Understanding of Renewable Energy

    Energy Technology Data Exchange (ETDEWEB)

    Broman, Lars; Kandpal, Tara C.

    2013-09-15

    Public understanding of science (PUS) is a central concept among science communicators. Public understanding of renewable energy (PURE) is proposed as an important sub-concept of PUS. The aim of this paper is to interest and invite renewable energy scientists to join a PURE research project. Four separate important questions for a PURE research project can be identified: (A) Is PURE important? (B) Which issues of PURE are the most important ones, according to renewable energy scientists? (C) What understanding of renewable energy has the general public today, worldwide? (D) How to achieve PURE?.

  3. Pure zeolite synthesis from silica extracted from coal fly ashes

    Energy Technology Data Exchange (ETDEWEB)

    Moreno, N.; Querol, X.; Plana, F.; Andres, J.M.; Janssen, M.; Nugteren, H. [CSIC, Barcelona (Spain). Inst. Earth Science ' Jaume Almera'

    2002-07-01

    Pure zeolites can be synthesised from silica extracted from fly ash by alkaline leaching. If the process is optimised the solid residue arising from this extraction may also contain a relatively high content of zeolitic material mixed with residual fly ash components. Both the pure and the impure zeolitic material have a high potential for application in waste-water and flue gas-cleaning technologies. The silica extraction potential of 23 European coal fly ashes covering most of the possible fly ash types is investigated in this study. Optimisation of leaching processes, by varying temperature, time and alkali/fly ash rates, permitted extraction yields up to 140 g of SiO{sub 2} per kg using a single step process, but the extraction yields may reach up to 210 g kg{sup -1} by applying thermal pre-treatments prior to the extraction. The solid residue arising from the silica extraction experiments shows a high NaP1 zeolite content. A high Si/Al ratio of the glass matrix, the occurrence of easily soluble silica phases in the original fly ash and a high reactive surface area were found to be the major parameters influencing silica extraction. High purity 4A and X zeolitic material was obtained by combining the silica extracts from the Meirama fly ash and a waste solution from the Al-anodising industry. The results allowed conversion of the silica extraction yields to an equivalent 630 g of pure 4A-X zeolite per kg of fly ash with a cation exchange capacity of 4.7 meq g{sup -1}.

  4. The pure relationship and below replacement fertility

    Directory of Open Access Journals (Sweden)

    Hall, David R.

    2003-01-01

    Full Text Available Of the many changes which have characterized the second demographic transition, shifts in fertility and union formation have attracted a great deal of interest from demographers. Despite the fact that researchers have extensively modeled recent demographic changes such as skyrocketing divorce rates, rising common-law union formation, delayed childbearing, and the decline to below-replacement fertility levels, our understanding of the causes of these trends, and the possible connections between them remains theoretically fragmented and incomplete. The goal of this paper is to advance our understanding in this area by exploring the insights on modern family formation of prominent sociologist Anthony Giddens. Specifically, this study examines whether Giddens' "pure relationship" concept can shed light on the trend toward very low fertility. The results of this inquiry suggest that couples in both marriages and common-law unions who conform to key aspects of Giddens pure relationship are morel likely to have uncertain or below-replacement fertility intentions, and less likely to embrace above-replacement fertility goals.

  5. LHC Signals of Pure Gravity Mediation

    Directory of Open Access Journals (Sweden)

    Feldstein Brian

    2013-05-01

    Full Text Available Evidence is mounting that natural supersymmetry at the weak scale is not realized in nature. This evidence comes from collider searches, a lack of new flavor changing neutral current effects, and now also the size of the measured Higgs mass. On the other hand, string theory suggests that supersymmetry might be present at some energy scale, and gauge coupling unification and dark matter imply that that energy scale may be relatively low. The simplest model to address all of these hints is arguably “pure gravity mediation”, in which the scalar superpartner masses are taken to be perhaps 100 TeV, with gauginos automatically acquiring loop factor suppressed masses of order TeV. The gauginos might then be the only superpartners accessible to the LHC. Unification and LSP dark matter are maintained (with a wino LSP at the cost of a 10−5 or 10−6 fine tuning. Here I will discuss the structure and LHC phenomenology of pure gravity mediation.

  6. MRI of autosomal dominant pure spastic paraplegia

    Energy Technology Data Exchange (ETDEWEB)

    Krabbe, K.; Fallentin, E.; Herning, M. [Danish Research Center of Magnetic Resonance, Hvidovre Hospital, Kettegaard alle 30, DK-2650 Hvidovre (Denmark); Nielsen, J.E.; Fenger, K. [Institute of Medical Biochemistry and Genetics, Laboratory of Medical Genetics, Section of Neurogenetics, University of Copenhagen (Denmark)

    1997-10-01

    We examined 16 patients with autosomal dominant pure spastic paraplegia (HSP) and 15 normal controls matched for age and sex using MRI of the brain and spinal cord. Images were assessed qualitatively by two independent radiologists, blinded to the clinical diagnosis. Areas of the brain and corpus callosum on one midsagittal slice and the area of the brain on one axial slice were measured and a ``corpus-callosum index`` expressing the size of the corpus callosum relative to that of the brain was calculated. Cross-sectional areas and anteroposterior and transverse diameters of the spinal cord at the levels of C 2, C 5, T 3, T 6, T 9 and T 11 were measured. No significant differences between patients and controls were found on qualitative evaluation of the images. The patients had a significantly smaller corpus callosum and ``corpus-callosum index`` than controls. This finding, not reported previously, might indicate that the disease process in pure HSP is not confined to the spinal cord. The anteroposterior diameters of the spinal cord at T 3 and T 9 were significantly smaller in patients than in controls. This might correspond to the degeneration of the pyramidal tracts and the dorsal columns described at neuropathological examination. (orig.). With 1 fig., 3 tabs.

  7. Development of Soybean Highly Pure Powdered Lecithin

    Institute of Scientific and Technical Information of China (English)

    LiGuihua; GuKeren; LiangShaohua

    2002-01-01

    This project makes use of Condensed Soybean Phospholipids(CSP)to produce highly pure powdered soybean lecithin.In the production technology,the first step is to de-oil by continuously delivered material,high effective mixing CSP with acetone and circular extraction.The second step is to centrifugally separate the lecithin miscellaneous liquid into miscellaneous oil and solid-state lecithin with acetone.Then the mixing oil can be separated into crude oil and acetone by vaporization and condensation.If the acetone contains too much water,it shoud be rectified for use circularly.Solid state lecithin with acetone can be made into highly pure powdered soybean lecithin (acetone insoluble matter >95%)under the following conditions:vacuum 750mmHg,temperature 60℃,time 20 minutes.The production not only reaches the domestic and oversea quality index,but also has favorable hydrophilic property,which makes it become natural food additive and sanitarian nurture.

  8. Isolating highly pure rat spermatogonial stem cells in culture.

    Science.gov (United States)

    Hamra, F Kent; Chapman, Karen M; Wu, Zhuoru; Garbers, David L

    2008-01-01

    Methods are detailed for isolating highly pure populations of spermatogonial stem cells from primary cultures of testis cells prepared from 22- to 24-day-old rats. The procedure is based on the principle that testicular somatic cells bind tightly to plastic and collagen matrices when cultured in serum-containing medium, whereas spermatogonia and spermatocytes do not bind to plastic or collagen when cultured in serum-containing medium. The collagen-non-binding testis cells obtained using these procedures are thus approx. 97% pure spermatogenic cells. Stem spermatogonia are then easily isolated from the purified spermatogenic population during a short incubation step in culture on laminin matrix. The spermatogenic cells that bind to laminin are more than 90% undifferentiated, type A spermatogonia and are greatly enriched in genetically modifiable stem cells that can develop into functional spermatozoa. This method does not require flow cytometry and can also be applied to obtain enriched cultures of mouse spermatogonial stem cells. The isolated spermatogonia provide a highly potent and effective source of stem cells that have been used to initiate in vitro and in vivo culture studies on spermatogenesis.

  9. Scaling BPS Solutions and pure-Higgs States

    CERN Document Server

    Bena, Iosif; de Boer, Jan; El-Showk, Sheer; Bleeken, Dieter Van den

    2012-01-01

    Depending on the value of the coupling, BPS states of type II string theory compactified on a Calabi-Yau manifold can be described as multicenter supergravity solutions or as states on the Coulomb or the Higgs branch of a quiver gauge theory. While the Coulomb-branch states can be mapped one-to-one to supergravity states, this is not automatically so for Higgs-branch states. In this paper we explicitly compute the BPS spectrum of the Higgs branch of a three-center quiver with a closed loop, and identify the subset of states that are in one-to-one correspondence with Coulomb/supergravity multicenter states. We also show that there exist additional "pure-Higgs" states, that exist if and only if the charges of the centers can form a scaling solution. Using generating function techniques we compute the large charge degeneracy of the "pure-Higgs" sector and show that it is always exponential. We also construct the map between Higgs- and Coulomb-branch states, discuss its relation to the Higgs-Coulomb map of one of...

  10. The Passive Film Characteristics of Cold Deformed Pure Copper

    Science.gov (United States)

    Fattah-Alhosseini, Arash; Naseri, Majid; Imantalab, Omid; Gholami, Davood; Haghshenas, Meysam

    2016-09-01

    In the present study, the effect of cold deformation on the electrochemical and passive behaviors of pure copper in 0.01 M NaOH solution was investigated. The dislocation density in cold deformation was calculated using a recently developed JAVA-based software, materials analysis using diffraction, based on Rietveld's whole x-ray pattern fitting methodology. At the thickness reduction of 70%, the microhardness measured as 125.30 HV, which is 1.56 times than that in the annealed pure copper (80.25 HV). Potentiodynamic polarization plots and electrochemical impedance spectroscopy measurements showed that increasing the cold deformation offers better conditions for forming the passive films. In the Mott-Schottky analysis, no evidence for n-type behavior was obtained which indicates that the oxygen vacancies and the copper interstitials did not have any significant population density in the passive films. Also, this analysis revealed that with increasing cold deformation, the acceptor density of the passive films decreased.

  11. Preparation and characterization of free-standing pure porphyrin nanoparticles

    Indian Academy of Sciences (India)

    Arun Kumar Perepogu; Prakriti Ranjan Bangal

    2008-09-01

    Preparation and characterization of absolutely pure and stable nanoparticles of 5,10,15,20-meso-tetrakis phenyl porphyrin (TPP) and catalytically repute 5,10,15,20-meso-tetrakis pentaflurophenyl porphyrin (H2F20TPP) by improved ‘reprecipitation method’ is described. The innovation of this modified `reprecipitation method’ lies on the judicial selection of organic solvent and amount of porphyrin solution to be injected in the aqueous media. Exactly similar process produces relatively small nanoparticles for TPP than that of H2F20TPP while the stability of the H2F20TPP nanoparticles is bit higher than nanoparticles of TPP. Absorption and emission spectra reveal that the formation of nanoparticles for both the cases is induced by J- and H-type aggregation. DFT calculations predict the optimized geometries and frontier molecular orbital, which favours the strength of face-to-face interaction with neighbour molecules to be more facile for TPP than that of H2F20TPP helping the latter to form bigger and relatively more stable and free-standing nanoparticles. The use of no other compounds except dichloromethane, a highly volatile organic solvent and respective porphyrins give absolutely pure nanoparticles. This improved method will lead to produce organic nanoparticles of -conjugated systems easily and efficiently.

  12. Pure menstrual migraine with sensory aura: a case report.

    Science.gov (United States)

    Chen, Jiann-Jy; Hsu, Yung-Chu; Chen, Dem-Lion

    2012-07-01

    Hormonal changes related to the menstrual cycle have a great impact on migraines in women. Menstrual migraine attacks are almost invariably without aura. Categorizing migraines into menstrual or non-menstrual types is one way to stratify migraines without aura according to the appendix criteria of the International Classification of Headache Disorders. We report a peri-menopausal woman whose sensory aura exclusively heralded menstrual migraine. A 51-year-old woman had suffered from monthly episodic headaches since the age of 46. Before a headache, and within 1 h on the first day of her menstruation, she always experienced numbness in her entire left upper limb. After the sensory aura, migrainous headaches occurred with nausea and photophobia. In the postmenopausal period, she no longer had sensory aura, and her headache pattern changed and became less severe. Her physical and neurologic exams as well as electroencephalography, brain magnetic resonance imaging, and conventional angiography were all normal. She fulfilled the diagnosis of pure menstrual migraine with typical sensory aura. To our knowledge, this is the first formal case report of pure menstrual migraine with aura.

  13. Beyond pure parasystole: promises and problems in modeling complex arrhythmias.

    Science.gov (United States)

    Courtemanche, M; Glass, L; Rosengarten, M D; Goldberger, A L

    1989-08-01

    The dynamics of pure parasystole, a cardiac arrhythmia in which two competing pacemakers fire independently, have recently been fully characterized. This model is now extended in an attempt to account for the more complex dynamics occurring with modulated parasystole, in which there exists nonlinear interaction between the sinus node and the ectopic ventricular focus. Theoretical analysis of modulated parasystole reveals three types of dynamics: entrainment, quasiperiodicity, and chaos. Rhythms associated with quasiperiodicity obey a set of rules derived from pure parasystole. This model is applied to the interpretation of continuous electrocardiographic data sets from three patients with complicated patterns of ventricular ectopic activity. We describe several new statistical properties of these records, related to the number of intervening sinus beats between ectopic events, that are essential in characterizing the dynamics and testing mathematical models. Detailed comparison between data and theory in these cases show substantial areas of agreement as well as potentially important discrepancies. These findings have implications for understanding the dynamics of the heartbeat in normal and pathological conditions.

  14. Chapter 12. Pure Tap Water Hydraulic Systems and Applications

    DEFF Research Database (Denmark)

    Conrad, Finn; Adelstorp, Anders

    1997-01-01

    Presentation of developed a modern pure tap water hydraulic components (Nessie), systems and industrial applications.......Presentation of developed a modern pure tap water hydraulic components (Nessie), systems and industrial applications....

  15. Pure Red Cell Aplasia Caused by Acute Hepatitis A

    OpenAIRE

    Lee, Tae Heon; Oh, Suk Joong; Hong, Soojung; Lee, Kyu Bek; Park, Hyosoon; Woo, Hee-Yeon

    2011-01-01

    Pure red cell aplasia is characterized as a normocytic anemia associated with reticulocytopenia and the absence of erythroblasts in the bone marrow. Pure red cell aplasia can be induced by various causes such as thymoma, connective tissue disease, viral infection, lymphoma, and adverse drug reactions. There have been only a few reports of pure red cell aplasia associated with acute viral hepatitis A. In Korea, no case of pure red cell aplasia caused by acute hepatitis A has yet been reported....

  16. Hologram of a pure state black hole

    Science.gov (United States)

    Roy, Shubho R.; Sarkar, Debajyoti

    2015-12-01

    In this paper, we extend the Hamilton-Kabat-Lifschytz-Lowe (HKLL) holographic smearing function method to reconstruct (quasi)local anti-de Sitter bulk scalar observables in the background of a large anti-de Sitter black hole formed by null shell collapse (a "pure state" black hole), from the dual conformal field theory which is undergoing a sudden quench. In particular, we probe the near horizon and subhorizon bulk locality. First, we construct local bulk operators from the conformal field theory in the leading semiclassical limit, N →∞ . Then, we look at effects due to the finiteness of N , where we propose a suitable coarse-graining prescription involving early and late time cutoffs to define semiclassical bulk observables which are approximately local, their departure from locality being nonperturbatively small in N . Our results have important implications on the black hole information problem.

  17. Anomalous rectification in a purely electronic memristor

    Science.gov (United States)

    Wang, Jingrui; Pan, Ruobing; Cao, Hongtao; Wang, Yang; Liang, Lingyan; Zhang, Hongliang; Gao, Junhua; Zhuge, Fei

    2016-10-01

    An anomalous rectification was observed in a purely electronic memristive device Ti/ZnO/Pt. It could be due to (1) an Ohmic or quasi-Ohmic contact at the ZnO/Pt interface and (2) a Schottky contact at the Ti/ZnO interface. The Ohmic contact originates from the reduction of ZnO occurring in the whole film instead of only at the Ti/ZnO interface. The Schottky contact may come from moisture adsorbed in the nanoporous ZnO. The conduction in the electroformed device is controlled by the carrier trapping/detrapping of the trap sites, inducing a poor rectification and high nonlinearity. Furthermore, a complementary resistive switching was achieved.

  18. Momentum of the Pure Radiation Field

    Directory of Open Access Journals (Sweden)

    Lehnert B.

    2007-01-01

    Full Text Available The local momentum equation of the pure radiation field is considered in terms of an earlier elaborated and revised electromagnetic theory. In this equation the contribution from the volume force is found to vanish in rectangular geometry, and to become nonzero but negligible in cylindrical geometry. Consequently the radiated momentum is due to the Poynting vector only, as in conventional electrodynamics. It results in physically relevant properties of a photon model having an angular momentum (spin. The Poynting vector concept is further compared to the quantized momentum concept for a free particle, as represented by a spatial gradient operator acting on the wave function. However, this latter otherwise successful concept leads to difficulties in the physical interpretation of known and expected photon properties such as the spin, the negligible loss of transverse momentum across a bounding surface, and the Lorentz invariance.

  19. Evolving spacetimes with purely radial tension

    Directory of Open Access Journals (Sweden)

    B. Nasre Esfahani

    2000-12-01

    Full Text Available   In this study time-dependent and spherically symmetric solutions of the Einstein field equations in an anisotropic background with a purely radial tension are presented. There exist three classes of solutions,1 An open spacetime with a wormhole at its center. 2 A conical spacetime. 3 A closed spacetime. These inhomogeneous solutions are reduced to FRW spacetimes in matter-dominated era, asymptotically. Therefore, they can be used to describe local inhomogeneities that are not considered in the standard model. For the wormhole solution. it is explicity shown that the considered matter is non-exotic, that is, it does not violate the energy conditions. Also, static solutions are studied. There is only one static solution,a conical spacetime. In this case, the matter satisfies the energy condition critically.

  20. Pure White Cell Aplasia and Necrotizing Myositis

    Directory of Open Access Journals (Sweden)

    Peter Geon Kim

    2016-01-01

    Full Text Available Pure white cell aplasia (PWCA is a rare hematologic disorder characterized by the absence of neutrophil lineages in the bone marrow with intact megakaryopoiesis and erythropoiesis. PWCA has been associated with autoimmune, drug-induced, and viral exposures. Here, we report a case of a 74-year-old female who presented with severe proximal weakness without pain and was found to have PWCA with nonspecific inflammatory necrotizing myositis and acute liver injury on biopsies. These findings were associated with a recent course of azithromycin and her daily use of a statin. Myositis improved on prednisone but PWCA persisted. With intravenous immunoglobulin and granulocyte-colony stimulating factor therapies, her symptoms and neutrophil counts improved and were sustained for months.

  1. Fock expansion of multimode pure Gaussian states

    Energy Technology Data Exchange (ETDEWEB)

    Cariolaro, Gianfranco; Pierobon, Gianfranco, E-mail: gianfranco.pierobon@unipd.it [Università di Padova, Padova (Italy)

    2015-12-15

    The Fock expansion of multimode pure Gaussian states is derived starting from their representation as displaced and squeezed multimode vacuum states. The approach is new and appears to be simpler and more general than previous ones starting from the phase-space representation given by the characteristic or Wigner function. Fock expansion is performed in terms of easily evaluable two-variable Hermite–Kampé de Fériet polynomials. A relatively simple and compact expression for the joint statistical distribution of the photon numbers in the different modes is obtained. In particular, this result enables one to give a simple characterization of separable and entangled states, as shown for two-mode and three-mode Gaussian states.

  2. Hologram of a pure state black hole

    CERN Document Server

    Roy, Shubho R

    2015-01-01

    In this paper we extend the HKLL holographic smearing function method to reconstruct (quasi)local AdS bulk scalar observables in the background of a large AdS black hole formed by null shell collapse (a "pure state" black hole), from the dual CFT which is undergoing a sudden quench. In particular, we probe the near horizon and sub-horizon bulk locality. First we construct local bulk operators from the CFT in the leading semiclassical limit, $N\\rightarrow\\infty$. Then we look at effects due to the finiteness of $N$, where we propose a suitable coarse-graining prescription involving early and late time cut-offs to define semiclassical bulk observables which are approximately local; their departure from locality being non-perturbatively small in $N$. Our results have important implications on the black hole information problem.

  3. Purely antiferromagnetic magnetoelectric random access memory

    Science.gov (United States)

    Kosub, Tobias; Kopte, Martin; Hühne, Ruben; Appel, Patrick; Shields, Brendan; Maletinsky, Patrick; Hübner, René; Liedke, Maciej Oskar; Fassbender, Jürgen; Schmidt, Oliver G.; Makarov, Denys

    2017-01-01

    Magnetic random access memory schemes employing magnetoelectric coupling to write binary information promise outstanding energy efficiency. We propose and demonstrate a purely antiferromagnetic magnetoelectric random access memory (AF-MERAM) that offers a remarkable 50-fold reduction of the writing threshold compared with ferromagnet-based counterparts, is robust against magnetic disturbances and exhibits no ferromagnetic hysteresis losses. Using the magnetoelectric antiferromagnet Cr2O3, we demonstrate reliable isothermal switching via gate voltage pulses and all-electric readout at room temperature. As no ferromagnetic component is present in the system, the writing magnetic field does not need to be pulsed for readout, allowing permanent magnets to be used. Based on our prototypes, we construct a comprehensive model of the magnetoelectric selection mechanisms in thin films of magnetoelectric antiferromagnets, revealing misfit induced ferrimagnetism as an important factor. Beyond memory applications, the AF-MERAM concept introduces a general all-electric interface for antiferromagnets and should find wide applicability in antiferromagnetic spintronics.

  4. Bipedal nanowalker by pure physical mechanisms

    CERN Document Server

    Cheng, Juan; Hou, Ruizheng; Efremov, Artem; Liu, Ruchuan; van der Maarel, Johan RC; Wang, Zhisong

    2013-01-01

    Artificial nanowalkers are inspired by biomolecular counterparts from living cells, but remain far from comparable to the latter in design principles. The walkers reported to date mostly rely on chemical mechanisms to gain a direction; they all produce chemical wastes. Here we report a light-powered DNA bipedal walker based on a design principle derived from cellular walkers. The walker has two identical feet and the track has equal binding sites; yet the walker gains a direction by pure physical mechanisms that autonomously amplify an intra-site asymmetry into a ratchet effect. The nanowalker is free of any chemical waste. It has a distinct thermodynamic feature that it possesses the same equilibrium before and after operation, but generates a truly non-equilibrium distribution during operation. The demonstrated design principle exploits mechanical effects and is adaptable for use in other nanomachines.

  5. 7 CFR 201.64 - Pure live seed.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Pure live seed. 201.64 Section 201.64 Agriculture..., Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE (CONTINUED) FEDERAL SEED ACT FEDERAL SEED ACT REGULATIONS Tolerances § 201.64 Pure live seed. The tolerance for pure live seed shall be determined...

  6. Tractable Quantification of Entanglement for Multipartite Pure States

    Institute of Scientific and Technical Information of China (English)

    JIANG Nian-Quan; WANG Yu-Jian; ZHENG Yi-Zhuang; CAI Gen-Chang

    2008-01-01

    We present kth-order entanglement measure and global kth-order entanglement measure for multipartite pure states, and extend Bennett's measure of partial entropy for bipartite pure states to a multipartite case. These measures are computable and can effectively classify and quantify the entanglement of multipartite pure states.

  7. Production of pure hydrogen by ethanol dehydrogenation

    Energy Technology Data Exchange (ETDEWEB)

    Santacesaria, E.; Carotenuto, G.; Tesser, R.; Di Serio, M. [Naples ' ' Federico II' ' Univ. (Italy). Dept. of Chemistry

    2010-12-30

    Hydrogen production from bio-ethanol is one of the most promising renewable processes to generate electricity using fuel cells. In this work, we have studied the production of pure hydrogen as by product of ethanol dehydrogenation reaction. This reaction is promoted by copper based catalysts and according to the catalyst used and the operative conditions gives place to acetaldehyde or ethyl acetate as main products. We studied in particular the performance of a commercial copper/copper chromite catalyst, supported on alumina and containing barium chromate as promoter that has given the best results. By operating at low pressure and temperature with short residence times, acetaldehyde is more selectively produced, while, by increasing the pressure (10-30 bars), the temperature (200-260 C) and the residence time (about 100 (grams hour/mol) of ethanol contact time) the selectivity is shifted to the production of ethyl acetate. However, in both cases pure hydrogen is obtained, as by product, that can easily be separated. Hydrogen obtained in this way is exempt of CO and can be directly fed to fuel cells without any inconvenience. In this work, runs performed in different operative conditions have been reported with the scope to individuate the best conditions. A carrier of H{sub 2} 6% in N{sub 2} has been used. The studied catalyst has also shown a good thermal stability with respect to sintering phenomena, that generally occurs during the dehydrogenation on other copper catalysts. Hydrogen productivities of 8-39 mol{sub H2} (gcat){sup -1}(h){sup -1} have been obtained for the explored temperature range 200-260 C. At last, the most accredited reaction mechanism is reported and discussed on the basis of the obtained results. (orig.)

  8. 高产铁载体假单胞菌的筛选及其对铁氧化物的利用%Screening of Pseudomonas Strains Producing High-yield Siderophore and Its Utilization of Iron Hydroxides

    Institute of Scientific and Technical Information of China (English)

    朱慧明; 张彦; 杨洪江

    2015-01-01

    The aim of this study is to isolate the microorganisms producing high-yield siderophore, investigate antimicrobial activity of siderophore against pathogenic bacteria, and study the effect of siderophore on the utilization of insoluble poorly crystalline iron hydroxides (PICH). CAS method was used for isolating microorganisms producing high-yield siderophore. Agar diffusion method and growth inhibition assay were used to test antimicrobial activities of siderophore. Sequence alignment of 16S rRNA gene was used for strain identification. Bacterial growth was measured to investigate the utilization of insoluble PCIH by siderophore. Totally, 172 siderophore-producing strains were isolated from soil samples, including 13 potentially strong siderophore producers(PSSP). The analysis of antimicrobial activities of siderophore showed that only the supernatant of Z158 culture had a pronounced inhibiting effect on the growth of Staphylococcus aureus, Micrococcus luteus, Proteus vulgaris, and Vibrio parahemolyticus, and the inhibition efficiency was 51.3%, 50.2%, 37.1%, and 28.0%, respectively. Homology analysis of 16S rRNA gene sequence identified strain Z158 as Pseudomonas aeruginosa. Moreover, with insoluble PICH as sole iron source, the biomass of Z158 increased by 46.1%at 24 h after incubation. In conclusion, the siderophore secreted by P. aeruginosa Z158 could inhibit the growth of pathogenic bacteria and acquire iron element from insoluble PCIH.%筛选高产铁载体的微生物,研究铁载体的抑菌作用和对不溶性未定型铁氧化物(poorly crystalline iron hydroxides, PCIH)的利用。CAS法筛选高产铁载体菌株,采用琼脂扩散法和生长抑制测定铁载体的抑菌作用,利用16S rRNA基因序列比对鉴定分离菌株,并根据分离菌株的生长情况,确定铁载体对不溶性PCIH的利用。从土壤样品中共筛选到172株产铁载体的菌株,高产铁载体菌株13株,其中仅有菌株Z158

  9. Random unitary evolution model of quantum Darwinism with pure decoherence

    Science.gov (United States)

    Balanesković, Nenad

    2015-10-01

    We study the behavior of Quantum Darwinism [W.H. Zurek, Nat. Phys. 5, 181 (2009)] within the iterative, random unitary operations qubit-model of pure decoherence [J. Novotný, G. Alber, I. Jex, New J. Phys. 13, 053052 (2011)]. We conclude that Quantum Darwinism, which describes the quantum mechanical evolution of an open system S from the point of view of its environment E, is not a generic phenomenon, but depends on the specific form of input states and on the type of S- E-interactions. Furthermore, we show that within the random unitary model the concept of Quantum Darwinism enables one to explicitly construct and specify artificial input states of environment E that allow to store information about an open system S of interest with maximal efficiency.

  10. Accelerating degradation rate of pure iron by zinc ion implantation

    Science.gov (United States)

    Huang, Tao; Zheng, Yufeng; Han, Yong

    2016-01-01

    Pure iron has been considered as a promising candidate for biodegradable implant applications. However, a faster degradation rate of pure iron is needed to meet the clinical requirement. In this work, metal vapor vacuum arc technology was adopted to implant zinc ions into the surface of pure iron. Results showed that the implantation depth of zinc ions was about 60 nm. The degradation rate of pure iron was found to be accelerated after zinc ion implantation. The cytotoxicity tests revealed that the implanted zinc ions brought a slight increase on cytotoxicity of the tested cells. In terms of hemocompatibility, the hemolysis of zinc ion implanted pure iron was lower than 2%. However, zinc ions might induce more adhered and activated platelets on the surface of pure iron. Overall, zinc ion implantation can be a feasible way to accelerate the degradation rate of pure iron for biodegradable applications. PMID:27482462

  11. Determination of Textural and Sensory Properties of Yogurt Produced with The Vegetable Puree

    Directory of Open Access Journals (Sweden)

    Tülay Özcan

    2016-07-01

    Full Text Available In this study, five different set type yogurt with vegetable purees, namely as control (K, yogurt with pumpkin (YBK, yogurt with carrot (YHA, yogurt with green peas (YBE and yogurt with zucchini (YYK were produced. The viable cell counts of S. thermophilus and L. delbrueckii subsp. bulgaricus were increased as a result of the ability of dietary fiber to stimulate their growth which is present in yogurt as puree. Vegetable puree addition had a noticeable effect on pH, titratable acidity, whey separation, sensory properties as well as textural attributes such as firmness, cohesiveness, consistency and viscosity index in yogurt. The highest viscosity index, consistency and firmness were observed in yogurt with the carrot puree, while the samples with zucchini presented the less compact structure and textural properties. As a result the present work showed that all the vegetable puree used had a beneficial role to improve textural properties of set type non-fat yogurt and could be used for the development of dairy products with functional ingredients.

  12. Pseudomonas aeruginosa adapts its iron uptake strategies in function of the type of infections

    Directory of Open Access Journals (Sweden)

    Pierre eCornelis

    2013-11-01

    Full Text Available Pseudomonas aeruginosa is a Gram-negative -Proteobacterium which is known for its capacity to colonize various niches, including some invertebrate and vertebrate hosts, making it one of the most frequent bacteria causing opportunistic infections. P. aeruginosa is able to cause acute as well as chronic infections and it uses different colonization and virulence factors to do so. Infections range from septicemia, urinary infections, burn wound colonization, and chronic colonization of the lungs of cystic fibrosis patients. Like the vast majority of organisms, P. aeruginosa needs iron to sustain growth. P. aeruginosa utilizes different strategies to take up iron, depending on the type of infection it causes. Two siderophores are produced by this bacterium, pyoverdine and pyochelin, characterized by high and low affinities for iron respectively. P. aeruginosa is also able to utilize different siderophores from other microorganisms (siderophore piracy. It can also take up heme from hemoproteins via two different systems. Under microaerobic or anaerobic conditions, P. aeruginosa is also able to take up ferrous iron via its Feo system using redox-cycling phenazines. Depending on the type of infection, P. aeruginosa can therefore adapt by switching from one iron uptake system to another as we will describe in this short review.

  13. Pure Culture Fermentation of Brined Cucumbers.

    Science.gov (United States)

    Etchells, J L; Costilow, R N; Anderson, T E; Bell, T A

    1964-11-01

    The relative abilities of Pediococcus cerevisiae, Lactobacillus plantarum, L. brevis, and several other species of lactic acid bacteria to grow and produce acid in brined cucumbers were evaluated in pure culture fermentations. Such fermentations were made possibly by the use of two techniques, gamma radiation (0.83 to 1.00 Mrad) and hot-water blanching (66 to 80 C for 5 min), designed first to rid the cucumbers of naturally occurring, interfering, and competitive microbial groups prior to brining, followed by inoculation with the desired lactic acid bacteria. Of the nine species tested, strains of the three common to cucumber fermentations, P. cerevisiae, L. plantarum, and L. brevis, grew to the highest populations, and produced the highest levels of brine acidity and the lowest pH values in fermentations at 5.4 to 5.6% NaCl by weight; also, their sequence of active development in fermentations, with the use of a three-species mixture for inoculation, was in the species order just named. This sequence of occurrence was similar to that estimated by others for natural fermentations. The rates of growth and acid production in fermentations with a mixture of P. cerevisiae, L. plantarum, and L. brevis increased as the incubation temperature was increased from 21 to 27 to 32 C; however, the maximal populations and acidities attained were essentially the same for fermentations at each temperature. Further, these same three species were found to be the most salt tolerant of those tested; their upper limit for appreciable growth and measurable acid production was about 8% salt, whereas thermophilic species such as L. thermophilus, L. lactis, L. helveticus, L. fermenti, and L. delbrueckii exhibited a much lower salt tolerance, ranging from about 2.5 to 4.0%. However, certain strains of L. delbrueckii grew very rapidly in cucumbers brined at 2.5 to 3.0% salt, and produced sufficient acid in about 30 hr at 48 C to reduce the brine pH from above 7.0 to below 4.0. An inexpensive

  14. Interfacial oxidations of pure titanium and titanium alloys with investments.

    Science.gov (United States)

    Ban, S; Watanabe, T; Mizutani, N; Fukui, H; Hasegawa, J; Nakamura, H

    2000-12-01

    External oxides of a commercially pure titanium (cpTi), Ti6Al4V alloy, and an experimental beta-type titanium alloy (Ti 53.4 wt%, Nb 29 wt%, Ta 13 wt%, and Zr 4.6 wt%) were characterized after heating to 600, 900, 1150, and 1400 degrees C in contact with three types of investments (alumina cement, magnesia cement, and phosphate-bonded) in air. XRD studies demonstrated that MgO, Li2TiO3 and/or Li2Ti3O7 were formed through reactions with the metal and the constituents in the magnesia cement-investment after heating to 900, 1150, and 1400 degrees C. Except for these conditions, TiO2 (rutile) was only formed on cpTi. For titanium alloys, the other components apart from Ti also formed simple and complex oxides such as Al2O3 and Al2TiO5 on Ti6Al4V, and Zr0.25Ti0.75Nb2O7 on the beta-type titanium alloy. However, no oxides containing V or Ta were formed. These results suggest that the constituents of titanium alloys reacted with the investment oxides and atmospheric oxygen to form external oxides due to the free energy of oxide formation and the concentration of each element on the metal surface.

  15. Direct detection of fungal siderophores on bats with white-nose syndrome via fluorescence microscopy-guided ambient ionization mass spectrometry.

    Directory of Open Access Journals (Sweden)

    Samantha J Mascuch

    Full Text Available White-nose syndrome (WNS caused by the pathogenic fungus Pseudogymnoascus destructans is decimating the populations of several hibernating North American bat species. Little is known about the molecular interplay between pathogen and host in this disease. Fluorescence microscopy ambient ionization mass spectrometry was used to generate metabolic profiles from the wings of both healthy and diseased bats of the genus Myotis. Fungal siderophores, molecules that scavenge iron from the environment, were detected on the wings of bats with WNS, but not on healthy bats. This work is among the first examples in which microbial molecules are directly detected from an infected host and highlights the ability of atmospheric ionization methodologies to provide direct molecular insight into infection.

  16. Studies on Siderophore and Pigment Produced by an Adhered Bacterial Strain Halobacillus trueperi MXM-16 from the Mangrove Ecosystem of Goa, India.

    Science.gov (United States)

    Kharangate-Lad, Amrita; Bhosle, Saroj

    2016-12-01

    Mangroves are unique ecosystems in the coastal tropical and subtropical regions of the Earth. The fluctuation in salinity due to tidal action results in a prolific population of adhered halophilic and halotolerant bacteria in this ecosystem. In this study, a pigment producing adhered bacterial strain Halobacillus trueperi MXM-16 was isolated from mangrove plant litter of Goa. This strain was moderately halophilic, Gram positive rod, catalase positive and capable of utilizing sodium benzoate as a source of carbon. H. trueperi MXM-16, produced a siderophore that was hydroxamate in nature. The non-diffusible yellow pigment was a carotenoid and HPLC studies revealed a peak that was indicative of astaxanthin as one of the component. Further studies on the pigment exhibited its ability to chelate iron from the chrome azurol sulphonate medium behaving as an additional mechanism for iron acquisition.

  17. Crystallization and preliminary X-ray crystallographic analysis of MbtI, a protein essential for siderophore biosynthesis in Mycobacterium tuberculosis.

    Science.gov (United States)

    Harrison, Anthony J; Ramsay, Rochelle J; Baker, Edward N; Lott, J Shaun

    2005-01-01

    Mycobacterium tuberculosis, the causative agent of tuberculosis, depends on the secretion of salicylate-based siderophores called mycobactins for the acquisition of extracellular iron, which is essential for the growth and virulence of the bacterium. The protein MbtI is thought to be the isochorismate synthase enzyme responsible for the conversion of chorismate to isochorismate, the first step in the salicylate production required for mycobactin biosynthesis. MbtI has been overexpressed in Escherichia coli, purified and crystallized. The crystals diffract to a maximum resolution of 1.8 A. They belong to space group P2(1)2(1)2(1), with unit-cell parameters a = 51.8, b = 163.4, c = 194.9 A, consistent with the presence of either two, three or four molecules in the asymmetric unit.

  18. Direct detection of fungal siderophores on bats with white-nose syndrome via fluorescence microscopy-guided ambient ionization mass spectrometry

    Science.gov (United States)

    Mascuch, Samantha J.; Moree, Wilna J.; Cheng-Chih Hsu, Cheng-Chih; Turner, Gregory G.; Cheng, Tina L.; Blehert, David S.; Kilpatrick, A. Marm; Frick, Winifred F.; Meehan, Michael J.; Dorrestein, Pieter C.; Gerwick, Lena

    2015-01-01

    White-nose syndrome (WNS) caused by the pathogenic fungus Pseudogymnoascus destructans is decimating the populations of several hibernating North American bat species. Little is known about the molecular interplay between pathogen and host in this disease. Fluorescence microscopy ambient ionization mass spectrometry was used to generate metabolic profiles from the wings of both healthy and diseased bats of the genus Myotis. Fungal siderophores, molecules that scavenge iron from the environment, were detected on the wings of bats with WNS, but not on healthy bats. This work is among the first examples in which microbial molecules are directly detected from an infected host and highlights the ability of atmospheric ionization methodologies to provide direct molecular insight into infection.

  19. Pure Land or Pure Mind?: Locus of Awakening and American Popular Religious Culture

    Directory of Open Access Journals (Sweden)

    Richard K. Payne

    2015-03-01

    Full Text Available This essay has two sections, each with its own distinct goal, forming an interrelated whole. The first introduces “locus of awakening,” and applies it to the relative success in America of Zen and Tibetan Buddhisms, compared to Pure Land Buddhism. The explanatory power of the concept is demonstrated by also considering Soka Gakkai. The difference between popular culture treatments of Zen and Tibetan Buddhisms, and Pure Land Buddhism was the problematic leading to identifying locus of awakening as an aspect of Buddhist thought. The second section locates it in the history of Buddhist thought, demonstrating that it is not a modern conceptualization of the path, not one created in response to Euro–American religio-therapeutic culture. Locus of awakening is, instead, part of the continuity of the Buddhist tradition, and does not fall on one side or the other of the sometimes overdrawn dichotomy between Asian and American Buddhisms.

  20. Hyperbolic billiards of pure D=4 supergravities

    CERN Document Server

    Henneaux, M; Henneaux, Marc; Julia, Bernard

    2003-01-01

    We compute the billiards that emerge in the Belinskii-Khalatnikov-Lifshitz (BKL) limit for all pure supergravities in D=4 spacetime dimensions, as well as for D=4, N=4 supergravities coupled to k (N=4) Maxwell supermultiplets. We find that just as for the cases N=0 and N=8 investigated previously, these billiards can be identified with the fundamental Weyl chambers of hyperbolic Kac-Moody algebras. Hence, the dynamics is chaotic in the BKL limit. A new feature arises, however, which is that the relevant Kac-Moody algebra can be the Lorentzian extension of a twisted affine Kac-Moody algebra, while the N=0 and N=8 cases are untwisted. This occurs for N=5, N=3 and N=2. An understanding of this property is provided by showing that the data relevant for determining the billiards are the restricted root system and the maximal split subalgebra of the finite-dimensional real symmetry algebra characterizing the toroidal reduction to D=3 spacetime dimensions. To summarize: split symmetry controls chaos.

  1. Purely antiferromagnetic magnetoelectric random access memory

    Science.gov (United States)

    Kosub, Tobias; Kopte, Martin; Hühne, Ruben; Appel, Patrick; Shields, Brendan; Maletinsky, Patrick; Hübner, René; Liedke, Maciej Oskar; Fassbender, Jürgen; Schmidt, Oliver G.; Makarov, Denys

    2017-01-01

    Magnetic random access memory schemes employing magnetoelectric coupling to write binary information promise outstanding energy efficiency. We propose and demonstrate a purely antiferromagnetic magnetoelectric random access memory (AF-MERAM) that offers a remarkable 50-fold reduction of the writing threshold compared with ferromagnet-based counterparts, is robust against magnetic disturbances and exhibits no ferromagnetic hysteresis losses. Using the magnetoelectric antiferromagnet Cr2O3, we demonstrate reliable isothermal switching via gate voltage pulses and all-electric readout at room temperature. As no ferromagnetic component is present in the system, the writing magnetic field does not need to be pulsed for readout, allowing permanent magnets to be used. Based on our prototypes, we construct a comprehensive model of the magnetoelectric selection mechanisms in thin films of magnetoelectric antiferromagnets, revealing misfit induced ferrimagnetism as an important factor. Beyond memory applications, the AF-MERAM concept introduces a general all-electric interface for antiferromagnets and should find wide applicability in antiferromagnetic spintronics. PMID:28045029

  2. Reexamination of pure qubit work extraction.

    Science.gov (United States)

    Frenzel, Max F; Jennings, David; Rudolph, Terry

    2014-11-01

    Many work extraction or information erasure processes in the literature involve the raising and lowering of energy levels via external fields. But even if the actual system is treated quantum mechanically, the field is assumed to be classical and of infinite strength, hence not developing any correlations with the system or experiencing back-actions. We extend these considerations to a fully quantum mechanical treatment by studying a spin-1/2 particle coupled to a finite-sized directional quantum reference frame, a spin-l system, which models an external field. With this concrete model together with a bosonic thermal bath, we analyze the back-action a finite-size field suffers during a quantum-mechanical work extraction process and the effect this has on the extractable work and highlight a range of assumptions commonly made when considering such processes. The well-known semiclassical treatment of work extraction from a pure qubit predicts a maximum extractable work W=kTlog2 for a quasistatic process, which holds as a strict upper bound in the fully quantum mechanical case and is attained only in the classical limit. We also address the problem of emergent local time dependence in a joint system with a globally fixed Hamiltonian.

  3. Crystal Structure Refinement of Synthetic Pure Gyrolite

    Directory of Open Access Journals (Sweden)

    Arūnas Baltušnikas

    2015-03-01

    Full Text Available Pure calcium silicate hydrate – gyrolite was prepared under the saturated steam pressure at 473 K temperature in rotating autoclave. The crystal structure of synthetic gyrolite was investigated by X-ray diffraction and refined using Le Bail, Rietveld and crystal structure modelling methods. Background, peak shape parameters and verification of the space group were performed by the Le Bail full pattern decomposition. Peculiarities of interlayer sheet X of gyrolite unit cell were highlighted by Rietveld refinement. Possible atomic arrangement in interlayer sheet X was solved by global optimization method. Most likelihood crystal structure model of gyrolite was calculated by final Rietveld refinement. It was crystallographically showed, that cell parameters are: a = 0.9713(2 nm, b = 0.9715(2 nm, c = 2.2442(3 nm and alfa = 95.48(2 º, beta = 91.45(2 °, gamma = l20.05(3 °.DOI: http://dx.doi.org/10.5755/j01.ms.21.1.5460

  4. Non-universalities in pure gravity mediation

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Jason L.; Olive, Keith A. [University of Minnesota, William I. Fine Theoretical Physics Institute, School of Physics and Astronomy, Minneapolis, MN (United States); Ibe, Masahiro [University of Tokyo, ICRR, Kashiwa (Japan); University of Tokyo, Kavli IPMU (WPI), TODIAS, Kashiwa (Japan); Yanagida, Tsutomu T. [University of Tokyo, Kavli IPMU (WPI), TODIAS, Kashiwa (Japan)

    2013-10-15

    The simplest model of pure gravity mediation contains only two free parameters: the gravitino mass and tan{beta}. Scalar masses are universal at some high energy renormalization scale and gaugino masses are determined through anomalies and depend on the gravitino mass and the gauge couplings. This theory requires a relatively large gravitino mass (m{sub 3/2}>or similar 300 TeV) and a limited range in tan{beta}{approx_equal}1.7-2.5. Here we generalize the theory to allow for non-universality in the Higgs soft masses. This introduces zero, one or two new free parameters associated with Higgs soft masses. This generalization allows us to greatly increase the allowed range in tan{beta} and it allows one to find viable solutions with lower m{sub 3/2}. The latter is important if we hope to find a low energy signal from gluinos. Some special cases of these non-universalities are suggestive of Higgs bosons as Nambu-Goldstone bosons or a partial no-scale structure for the Higgs doublets. Thus, we probe signatures at the weak scale and structures at the GUT and/or Planck scale. (orig.)

  5. Foaming of mixtures of pure hydrocarbons

    Science.gov (United States)

    Robinson, J. V.; Woods, W. W.

    1950-01-01

    Mixtures of pure liquid hydrocarbons are capable of foaming. Nine hydrocarbons were mixed in pairs, in all possible combinations, and four proportions of each combination. These mixtures were sealed in glass tubes, and the foaming was tested by shaking. Mixtures of aliphatic with other aliphatic hydrocarbons, or of alkyl benzenes with other alkyl benzenes, did not foam. Mixtures of aliphatic hydrocarbons with alkyl benzenes did foam. The proportions of the mixtures greatly affected the foaming, the maximum foaming of 12 of 20 pairs being at the composition 20 percent aliphatic hydrocarbon, 80 percent alkyl benzene. Six seconds was the maximum foam lifetime of any of these mixtures. Aeroshell 120 lubricating oil was fractionated into 52 fractions and a residue by extraction with acetone in a fractionating extractor. The index of refraction, foam lifetime, color, and viscosity of these fractions were measured. Low viscosity and high index fractions were extracted first. The viscosity of the fractions extracted rose and the index decreased as fractionation proceeded. Foam lifetimes and color were lowest in the middle fractions. Significance is attached to the observation that none of the foam lifetimes of the fractions or residue is as high as the foam lifetime of the original Aeroshell, indicating that the foaming is not due to a particular foaming constituent, but rather to the entire mixture.

  6. Triplet Pairing in pure neutron matter

    CERN Document Server

    Srinivas, Sarath

    2016-01-01

    We study the zero temperature BCS gaps for the triplet channel in pure neutron matter using Similarity Renormalization Group (SRG) evolved interactions. We use the dependence of the results on the SRG resolution scale, as a tool to analyze medium and many-body corrections. In particular, we study the effects of including the three-body interactions at leading order, which appear at N2LO in the Chiral EFT, as well as that of the first-order self-energy corrections on the zero temperature gap. In addition we also extract the transition temperature as a function of densities and verify the BCS scaling of the zero temperature gaps to the transition temperature. We observe that the self-energy effects are very crucial in order to reduce the SRG resolution scale dependence of the results, while the three-body effects at the leading order do not change the two-body resolution scale dependence. On the other hand, the results depend strongly on the three-body cut-off, emphasizing the importance of the missing higher-o...

  7. Pure gauge spin-orbit couplings

    Science.gov (United States)

    Shikakhwa, M. S.

    2017-01-01

    Planar systems with a general linear spin-orbit interaction (SOI) that can be cast in the form of a non-Abelian pure gauge field are investigated using the language of non-Abelian gauge field theory. A special class of these fields that, though a 2×2 matrix, are Abelian are seen to emerge and their general form is given. It is shown that the unitary transformation that gauges away these fields induces at the same time a rotation on the wave function about a fixed axis but with a space-dependent angle, both of which being characteristics of the SOI involved. The experimentally important case of equal-strength Rashba and Dresselhaus SOI (R+D SOI) is shown to fall within this special class of Abelian gauge fields, and the phenomenon of persistent spin helix (PSH) that emerges in the presence of this latter SOI in a plane is shown to fit naturally within the general formalism developed. The general formalism is also extended to the case of a particle confined to a ring. It is shown that the Hamiltonian on a ring in the presence of equal-strength R+D SOI is unitarily equivalent to that of a particle subject to only a spin-independent but θ-dependent potential with the unitary transformation relating the two being again the space-dependent rotation operator characteristic of R+D SOI.

  8. Electron Acoustic Waves in Pure Ion Plasmas

    Science.gov (United States)

    Anderegg, F.; Affolter, M.; Driscoll, C. F.; O'Neil, T. M.; Valentini, F.

    2012-10-01

    Electron Acoustic Waves (EAWs) are the low-frequency branch of near-linear Langmuir (plasma) waves: the frequency is such that the complex dielectric function (Dr, Di) has Dr= 0; and ``flattening'' of f(v) near the wave phase velocity vph gives Di=0 and eliminates Landau damping. Here, we observe standing axisymmetric EAWs in a pure ion column.footnotetextF. Anderegg, et al., Phys. Rev. Lett. 102, 095001 (2009). At low excitation amplitudes, the EAWs have vph˜1.4 v, in close agreement with near-linear theory. At moderate excitation strengths, EAW waves are observed over a range of frequencies, with 1.3 v vphvph.footnotetextF. Valentini et al., arXiv:1206.3500v1. Large amplitude EAWs have strong phase-locked harmonic content, and experiments will be compared to same-geometry simulations, and to simulations of KEENfootnotetextB. Afeyan et al., Proc. Inertial Fusion Sci. and Applications 2003, A.N.S. Monterey (2004), p. 213. waves in HEDLP geometries.

  9. Photoionization Dynamics in Pure Helium Droplets

    Energy Technology Data Exchange (ETDEWEB)

    Peterka, Darcy S.; Kim, Jeong Hyun; Wang, Chia C.; Poisson,Lionel; Neumark, Daniel M.

    2007-02-04

    The photoionization and photoelectron spectroscopy of pure He droplets are investigated at photon energies between 24.6 eV (the ionization energy of He) and 28 eV. Time-of-flight mass spectra and photoelectron images were obtained at a series of molecular beam source temperatures and pressures to assess the effect of droplet size on the photoionization dynamics. At source temperatures below 16 K, the photoelectron images are dominated by fast electrons produced via direct ionization of He atoms, with a small contribution from very slow electrons with kinetic energies below 1 meV arising from an indirect mechanism. The fast photoelectrons have as much as 0.5 eV more kinetic energy than those from atomic He at the same photon energy. This result is interpreted and simulated within the context of a 'dimer model', in which one assumes vertical ionization from two nearest neighbor He atoms to the attractive region of the He2+ potential energy curve. Possible mechanism for the slow electrons, which were also seen at energies below IE(He), are discussed, including vibrational autoionizaton of Rydberg states comprising an electron weakly bound to the surface of a large HeN+ core.

  10. Shifting from preconceptions to pure wonderment.

    Science.gov (United States)

    Porr, Caroline

    2005-07-01

    The author reflects upon her role as a public health nurse striving to attain practice authenticity. Client assessment and nursing interventions were seemingly sufficient until she became curious about 'Who is this person sitting across from me?' and 'What are her experiences in the world as a lone parent living in poverty at the margins of society?' The author begins to think that she could shift from mere client investigation to pure wonderment about the Other by imagining herself as a researcher, an explorer of another's life world. Ultimately this process enables her to enhance the 'caring' in her practice with the knowledge gained of the perceptions and meanings impoverished clients assigned to their everyday lives. Jurgen Habermas' theory of communicative competence serves as the reference map guiding exploration. The author uses Habermas' theoretical principles of intersubjective mutuality--the validity claims of comprehensibility, truth, sincerity, and legitimacy. Comprehensibility embodies understanding, an attitude of unconditional acceptance, and care respect of another's individual person and self-defined reality. Intersubjective mutuality also requires that one dwell in the moment with the Other, satisfied that communication is founded on truth. Sincerity implies fostering the Other's expression of authentic self apart from oppressive distracters. Lastly, legitimacy reconciles the author's altruistic pursuit to know the Other's ontological truth with the reality of the present world.

  11. Triplet pairing in pure neutron matter

    Science.gov (United States)

    Srinivas, Sarath; Ramanan, S.

    2016-12-01

    We study the zero-temperature BCS gaps for the triplet channel in pure neutron matter using similarity renormalization group (SRG) evolved interactions. We use the dependence of the results on the SRG resolution scale as a tool to analyze medium and many-body corrections. In particular, we study the effects of including the three-body interactions at leading order, which appear at next-to-next-to leading order (N2LO) in the chiral effective field theory (EFT), as well as that of the first-order self-energy corrections on the zero-temperature gap. In addition we also extract the transition temperature as a function of densities and verify the BCS scaling of the zero-temperature gaps to the transition temperature. We observe that the self-energy effects are very crucial in order to reduce the SRG resolution scale dependence of the results, while the three-body effects at the leading order do not change the two-body resolution scale dependence. On the other hand, the results depend strongly on the three-body cutoff, emphasizing the importance of the missing higher-order three-body effects. We also observe that self-energy effects reduce the overall gap as well as shift the gap closure to lower densities.

  12. Twofold symmetries of the pure gravity action

    Science.gov (United States)

    Cheung, Clifford; Remmen, Grant N.

    2017-01-01

    We recast the action of pure gravity into a form that is invariant under a twofold Lorentz symmetry. To derive this representation, we construct a general parameterization of all theories equivalent to the Einstein-Hilbert action up to a local field redefinition and gauge fixing. We then exploit this freedom to eliminate all interactions except those exhibiting two sets of independently contracted Lorentz indices. The resulting action is local, remarkably simple, and naturally expressed in a field basis analogous to the exponential parameterization of the nonlinear sigma model. The space of twofold Lorentz invariant field redefinitions then generates an infinite class of equivalent representations. By construction, all off-shell Feynman diagrams are twofold Lorentz invariant while all on-shell tree amplitudes are automatically twofold gauge invariant. We extend our results to curved spacetime and calculate the analogue of the Einstein equations. While these twofold invariances are hidden in the canonical approach of graviton perturbation theory, they are naturally expected given the double copy relations for scattering amplitudes in gauge theory and gravity.

  13. Non-universalities in pure gravity mediation

    Science.gov (United States)

    Evans, Jason L.; Ibe, Masahiro; Olive, Keith A.; Yanagida, Tsutomu T.

    2013-10-01

    The simplest model of pure gravity mediation contains only two free parameters: the gravitino mass and tan β. Scalar masses are universal at some high energy renormalization scale and gaugino masses are determined through anomalies and depend on the gravitino mass and the gauge couplings. This theory requires a relatively large gravitino mass ( m 3/2≳300 TeV) and a limited range in tan β≃1.7-2.5. Here we generalize the theory to allow for non-universality in the Higgs soft masses. This introduces zero, one or two new free parameters associated with Higgs soft masses. This generalization allows us to greatly increase the allowed range in tan β and it allows one to find viable solutions with lower m 3/2. The latter is important if we hope to find a low energy signal from gluinos. Some special cases of these non-universalities are suggestive of Higgs bosons as Nambu-Goldstone bosons or a partial no-scale structure for the Higgs doublets. Thus, we probe signatures at the weak scale and structures at the GUT and/or Planck scale.

  14. Non-Universalities in Pure Gravity Mediation

    CERN Document Server

    Evans, Jason L; Ibe, Masahiro; Yanagida, Tsutomu T

    2013-01-01

    The simplest model of pure gravity mediation contains only two free parameters: the gravitino mass and \\tan\\beta. Scalar masses are universal at some high energy renormalization scale and gaugino masses are determined through anomalies and depend on the gravitino mass and the gauge couplings. This theory requires a relatively large gravitino mass (m_{3/2}\\gtrsim 300\\,TeV) and a limited range in \\tan \\beta \\simeq 1.7--2.5. Here we generalize the theory to allow for non-universality in the Higgs soft masses. This introduces zero, one or two new free parameters associated with Higgs soft masses. This generalization allows us to greatly increase the allowed range in \\tan \\beta and it allows one to find viable solutions with lower m_{3/2}. The latter is important if we hope to find a low energy signal from gluinos. Some special cases of these non-universalities are suggestive of Higgs bosons as Nambu-Goldstone bosons or a partial no-scale structure for the Higgs doublets. Thus, we probe signatures at the weak scal...

  15. Pure Electric and Pure Magnetic Resonances in Near-Infrared Metal Double-Triangle Metamaterial Arrays

    Institute of Scientific and Technical Information of China (English)

    CAO Zhi-Shen; PAN Jian; CHEN Zhuo; ZHAN Peng; MIN Nai-Ben; WANG Zhen-Lin

    2011-01-01

    @@ We experimentally and numerically investigate the optical properties of metamaterial arrays composed of double partially-overlapped metallic nanotriangles fabricated by an angle-resolved nanosphere lithography.We demonstrate that each double-triangle can be viewed as an artificial magnetic element analogous to the conventional metal split-ring-resonator.It is shown that under normal-incidence conditions,individual double-triangle can exhibit a strong local magnetic resonance,but the collective response of the metamaterial arrays is purely electric because magnetic resonances of the two double-triangles in a unit cell having opposite openings are out of phase.For oblique incidences the metamaterial arrays are shown to support a pure magnetic response at the same frequency band.Therefore,switchable electric and magnetic resonances are achieved in double-triangle arrays.Moreover,both the electric and magnetic resonances axe shown to allow for a tunability over a large spectral range down to near-infrared.%We experimentally and numerically investigate the optical properties of metamaterial arrays composed of double partially-overlapped metallic nanotriangles fabricated by an angle-resolved nanosphere lithography. We demonstrate that each double-triable can be viewed as an artificial magnetic element analogous to the conventional metal split-ring-resonator. It is shown that under normal-incidence conditions, individual double-triangle can exhibit a strong local magnetic resonance, but the collective response of the metamaterial arrays is purely electric because magnetic resonances of the two double-triangles in a unit cell having opposite openings are out of phase.For oblique incidences the metamaterial arrays are shown to support a pure magnetic response at the same frequency band. Therefore, switchable electric and magnetic resonances are achieved in double-triangle arrays.Moreover, both the electric and magnetic resonances are shown to allow for a tunability over

  16. Characterizing commercial pureed foods: sensory, nutritional, and textural analysis.

    Science.gov (United States)

    Ettinger, Laurel; Keller, Heather H; Duizer, Lisa M

    2014-01-01

    Dysphagia (swallowing impairment) is a common consequence of stroke and degenerative diseases such as Parkinson's and Alzheimer's. Limited research is available on pureed foods, specifically the qualities of commercial products. Because research has linked pureed foods, specifically in-house pureed products, to malnutrition due to inferior sensory and nutritional qualities, commercial purees also need to be investigated. Proprietary research on sensory attributes of commercial foods is available; however direct comparisons of commercial pureed foods have never been reported. Descriptive sensory analysis as well as nutritional and texture analysis of commercially pureed prepared products was performed using a trained descriptive analysis panel. The pureed foods tested included four brands of carrots, of turkey, and two of bread. Each commercial puree was analyzed for fat (Soxhlet), protein (Dumas), carbohydrate (proximate analysis), fiber (total fiber), and sodium content (Quantab titrator strips). The purees were also texturally compared with a line spread test and a back extrusion test. Differences were found in the purees for sensory attributes as well as nutritional and textural properties. Findings suggest that implementation of standards is required to reduce variability between products, specifically regarding the textural components of the products. This would ensure all commercial products available in Canada meet standards established as being considered safe for swallowing.

  17. Pure analgesics in a rheumatological outpatient clinic

    Directory of Open Access Journals (Sweden)

    M.A. Cimmino

    2011-09-01

    Full Text Available Objective: Pure analgesics are only rarely used by Italian clinicians and this holds true also for rheumatologists. This work is concerned with an evaluation of the use of analgesics in a rheumatological outpatient clinic during the period 1989-1999. Methods: The records of 1705 patients consecutively seen at the clinic were downloaded on a specifically built website. Results: 4469 visits were considered. In 260 of them (5.8%, analgesics were prescribed to 234 (13.7% patients. The number of patients with a prescription of analgesics steadily increased during the years 1989-1999. The diagnoses in patients assuming analgesics were: osteoarthritis (47.1%, inflammatory arthritis (24.2%, soft tissue rheumatisms (13.7%, nonspecific arthralgia/myalgia (7.5%, and connective tissue diseases (2.6%. Peripheral analgesics were used in 188 (82.5% patients and central analgesics were used in the remaining 40 patients (17.5%. Analgesic drugs were used mainly in degenerative joint conditions. The indications for analgesics in the 55 patients with inflammatory arthrits were: (a partial or total remission of arthritis; for this reason non-steroidal anti-inflammatory drugs were no longer required in 18 patients; (b to increase the analgesic effect of NSAIDs in 23 patients; (c contraindications to NSAIDs in 14 patients (renal failure in 2 patients, gastritis in 10, allergy and bleeding in the remaining two. Conclusions: About 14% of our outpatients were treated with analgesics with an increasing trend in the examined period. The main indications for analgesics are degenerative conditions but they can be used also in selected patients with arthritis.

  18. Peccei-Quinn symmetric pure gravity mediation

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Jason L.; Olive, Keith A. [University of Minnesota, William I. Fine Theoretical Physics Institute, School of Physics and Astronomy, Minneapolis, MN (United States); Ibe, Masahiro [University of Tokyo, ICRR, Kashiwa (Japan); University of Tokyo, Kavli IPMU (WPI), TODIAS, Kashiwa (Japan); Yanagida, Tsutomu T. [University of Tokyo, Kavli IPMU (WPI), TODIAS, Kashiwa (Japan)

    2014-07-15

    Successful models of pure gravity mediation (PGM) with radiative electroweak symmetry breaking can be expressed with as few as two free parameters, which can be taken as the gravitinomass and tan β. These models easily support a 125-126 GeV Higgs mass at the expense of a scalar spectrum in the multi-TeV range and a much lighter wino as the lightest supersymmetric particle. In these models, it is also quite generic that the Higgs mixing mass parameter, μ, which is determined by the minimization of the Higgs potential is also in the multi-TeV range. For μ > 0, the thermal relic density of winos is too small to account for the darkmatter. The same is true for μ < 0 unless the gravitinomass is of order 500 TeV. Here, we consider the origin of a multi-TeV μ parameter arising from the breakdown of a Peccei-Quinn (PQ) symmetry. A coupling of the PQ-symmetry breaking field, P, to the MSSM Higgs doublets, naturally leads to a value of μ ∝ left angle P right angle {sup 2}/M{sub P} ∝ O(100) TeV and of the order that is required in PGM models. In this case, axions make up the dark matter or some fraction of the dark matter with the remainder made up from thermal or non-thermal winos. We also provide solutions to the problem of isocurvature fluctuations with axion dark matter in this context. (orig.)

  19. POISSON TRAFFIC PROCESSES IN PURE JUMP MARKOV PROCESSES AND GENERALIZED NETWORKS

    Institute of Scientific and Technical Information of China (English)

    CAO Chengxuan; XU Guanghui

    2001-01-01

    In this paper, we present the conditions under which the traffic processes in a pure jump Markov process with a general state space are Poisson processes, and give a simple proof of PASTA type theorem in Melamed (1982) and Walrand (1988).Furthermore, we consider a generalized network with phase type negative arrivals and show that the network has a product-form invariant distribution and its traffic processes which represent the customers exiting from the network are Poisson processes.

  20. On the relation between hybrid and pure spinor string theory

    Energy Technology Data Exchange (ETDEWEB)

    Gerigk, Sebastian [ETH Zuerich (Switzerland). Inst. fuer Theoretische Physik; Kirsch, Ingo [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)

    2009-12-15

    In this paper we revisit Berkovits' pure spinor formalism in lower dimensions. We are particularly interested in relating a six-dimensional pure spinor action previously constructed in the literature to other superstring formalisms. In order to gain some insight into six-dimensional pure spinors, we first derive their action by gauge-fixing the classical six-dimensional Green-Schwarz action. We then consider a hybrid pure spinor construction in which the spacetime symmetries of six of the ten dimensions are described in pure spinor variables, while the remaining four dimensions are parameterized in terms of RNS variables. We relate this pure spinor formalism to the Berkovits-Vafa-Witten hybrid formalism of string theory on R{sup 6} x T{sup 4}. (orig.)

  1. Cytocompatibility of pure metals and experimental binary titanium alloys for implant materials.

    Science.gov (United States)

    Park, Yeong-Joon; Song, Yo-Han; An, Ji-Hae; Song, Ho-Jun; Anusavice, Kenneth J

    2013-12-01

    This study was performed to evaluate the biocompatibility of nine types of pure metal ingots (Ag, Al, Cr, Cu, Mn, Mo, Nb, V, Zr) and 36 experimental titanium (Ti) alloys containing 5, 10, 15, and 20 wt% of each alloying element. The cell viabilities for each test group were compared with that of CP-Ti using the WST-1 test and agar overlay test. The ranking of pure metal cytotoxicity from most potent to least potent was as follows: Cu>Al>Ag>V>Mn>Cr>Zr>Nb>Mo>CP-Ti. The mean cell viabilities for pure Cu, Al, Ag, V, and Mn were 21.6%, 25.3%, 31.7%, 31.7%, and 32.7%, respectively, which were significantly lower than that for the control group (p<0.05). The mean cell viabilities for pure Zr and Cr were 74.1% and 60.6%, respectively (p<0.05). Pure Mo and Nb demonstrated good biocompatibility with mean cell viabilities of 93.3% and 93.0%, respectively. The mean cell viabilities for all the Ti-based alloy groups were higher than 80% except for Ti-20 Nb (79.6%) and Ti-10 V (66.9%). The Ti-10 Nb alloy exhibited the highest cell viability (124.8%), which was higher than that of CP-Ti. Based on agar overlay test, pure Ag, Cr, Cu, Mn, and V were ranked as 'moderately cytotoxic', whereas the rest of the tested pure metals and all Ti alloys, except Ti-10 V (mild cytotoxicity), were ranked as 'noncytotoxic'. The results obtained in this study can serve as a guide for the development of new Ti-based alloy implant systems. Copyright © 2013 Elsevier Ltd. All rights reserved.

  2. Factors contributing to the rheology of tomato puree

    OpenAIRE

    Abson, Rachael

    2013-01-01

    Tomato (Solanum Iycopersicum) puree is created by homogenising the flesh of tomato fruits. The viscosity of this material and the fibrous content is of commercial interest. Tomato puree consists of suspended particles (consisting of whole cells, broken cells and cellular fragments) in an aqueous serum. The contribution of the non-soluble and soluble material to tomato puree rheology was studied with reference to the varying composition of solids and firmness of tomato fruit at four stages of ...

  3. Pure yolk sac tumor of testis in a 50 years old : A rare case report

    Directory of Open Access Journals (Sweden)

    Pradhan M Pagaro

    2016-01-01

    Full Text Available Yolk sac tumor (YST is most common in infants and children in age range of 3-8 years in pure form; however in adults, YST rarely occurs in pure form, but commonly occurs in association with other germ cell tumors as mixed forms. Less than 10 adult testicular pure YSTs have been reported in literature. We report a 50-year-old male with testicular neoplasm involving the left testis, with pain following trauma. Alpha-fetoprotein was markedly raised 5726 IU/ml, and on histopathology, characteristic features of YST with abundant Schiller–Duval bodies associated with reticular and microcystic pattern, and focal solid areas of nests and trabeculae of cuboidal cells, with prominent nucleoli and mitotic figures, were noted, and extensive histopathological search did not reveal presence of any other type of tumor.

  4. ActionScript Developer's Guide to PureMVC

    CERN Document Server

    Hall, Cliff

    2011-01-01

    Gain hands-on experience with PureMVC, the popular open source framework for developing maintainable applications with a Model-View-Controller architecture. In this concise guide, PureMVC creator Cliff Hall teaches the fundamentals of PureMVC development by walking you through the construction of a complete non-trivial Adobe AIR application. Through clear explanations and numerous ActionScript code examples, you'll learn best practices for using the framework's classes in your day-to-day work. Discover how PureMVC enables you to focus on the purpose and scope of your application, while the f

  5. Typical pure nonequilibrium steady states and irreversibility for quantum transport.

    Science.gov (United States)

    Monnai, Takaaki; Yuasa, Kazuya

    2016-07-01

    It is known that each single typical pure state in an energy shell of a large isolated quantum system well represents a thermal equilibrium state of the system. We show that such typicality holds also for nonequilibrium steady states (NESS's). We consider a small quantum system coupled to multiple infinite reservoirs. In the long run, the total system reaches a unique NESS. We identify a large Hilbert space from which pure states of the system are to be sampled randomly and show that the typical pure states well describe the NESS. We also point out that the irreversible relaxation to the unique NESS is important to the typicality of the pure NESS's.

  6. Typical pure nonequilibrium steady states and irreversibility for quantum transport

    Science.gov (United States)

    Monnai, Takaaki; Yuasa, Kazuya

    2016-07-01

    It is known that each single typical pure state in an energy shell of a large isolated quantum system well represents a thermal equilibrium state of the system. We show that such typicality holds also for nonequilibrium steady states (NESS's). We consider a small quantum system coupled to multiple infinite reservoirs. In the long run, the total system reaches a unique NESS. We identify a large Hilbert space from which pure states of the system are to be sampled randomly and show that the typical pure states well describe the NESS. We also point out that the irreversible relaxation to the unique NESS is important to the typicality of the pure NESS's.

  7. Pure invasive micropapillary carcinoma of the male breast: report of a rare case with C-MYC amplification.

    Science.gov (United States)

    Trépant, Anne-Laure; Hoorens, Anne; Noël, Jean-Christophe

    2014-12-01

    Male breast cancer is rare. The most common histological subtypes include invasive carcinoma "of no special type" and papillary carcinoma. Other variants, including pure micropapillary carcinoma, have been described as well but are extremely rare. Pure micropapillary carcinoma has been recently characterized by a C-MYC gene amplification in women. We report here, occurring in a 73-year-old man, the first case of pure micropapillary carcinoma with amplification of the C-MYC gene. Copyright © 2014 Elsevier GmbH. All rights reserved.

  8. Pure Culture Fermentation of Green Olives1

    Science.gov (United States)

    Etchells, J. L.; Borg, A. F.; Kittel, I. D.; Bell, T. A.; Fleming, H. P.

    1966-01-01

    The method previously developed by us for the pure-culture fermentation of brined cucumbers and other vegetables has been applied successfully to Manzanillo variety olives. Field-run grade fruit was processed first by conventional procedures to remove most of the bitterness. Then the relative abilities of Lactobacillus plantarum, L. brevis, Pediococcus cerevisiae, and Leuconostoc mesenteroides to become established and produce acid in both heat-shocked (74 C for 3 min) and unheated olives, brined at 4.7 to 5.9% NaCl (w/v basis), were evaluated. The heat-shock treatment not only proved effective in ridding the fruit of naturally occurring, interfering, and competitive microbial groups prior to brining and inoculation, but also made the olives highly fermentable with respect to growth and acid production by the introduced culture, particularly L. plantarum. Of the four species used as inocula, L. plantarum was by far the most vigorous in fermentation ability. It consistently produced the highest levels of brine acidity (1.0 to 1.2% calculated as lactic acid) and the lowest pH values (3.8 to 3.9) during the fermentation of heat-shocked olives. Also, L. plantarum completely dominated fermentations when used in two-species (with P. cerevisiae) and three-species (with P. cerevisiae and L. brevis) combinations as inocula. In contrast, when L. plantarum was inoculated into the brines of unheated olives it failed to become properly established; the same was true for the other species tested, but even to a more pronounced degree. L. brevis was the only species used that failed to develop in brines of both heat-shocked and unheated olives. Modification of the curing brine by the addition of lactic acid at the outset, either with or without dextrose, led to a much earlier onset of fermentation with accompanying acid development, as compared to treatments with dextrose alone or nonadditive controls. Reasons for the marked improvement of the fermentability of Manzanillo olives

  9. Auditory Repetition Priming Is Impaired in Pure Alexic Patients

    Science.gov (United States)

    Swick, Diane; Miller, Kimberly M.; Larsen, Jary

    2004-01-01

    Alexia without agraphia, or ''pure'' alexia, is an acquired impairment in reading that leaves writing skills intact. Repetition priming for visually presented words is diminished in pure alexia. However, it is not possible to verify whether this priming deficit is modality-specific or modality independent because reading abilities are compromised.…

  10. AdS pure spinor superstring in constant backgrounds

    Energy Technology Data Exchange (ETDEWEB)

    Chandia, Osvaldo [Departamento de Ciencias, Facultad de Artes Liberales, Universidad Adolfo Ibáñez,Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez,Diagonal Las Torres 2640, Peñalolén, Santiago (Chile); Bevilaqua, L. Ibiapina [Escola de Ciências e Tecnologia, Universidade Federal do Rio Grande do Norte,Caixa Postal 1524, 59072-970, Natal, RN (Brazil); Vallilo, Brenno Carlini [Facultad de Ciencias Exactas, Departamento de Ciencias Físicas, Universidad Andres Bello,Republica 220, Santiago (Chile)

    2014-06-05

    In this paper we study the pure spinor formulation of the superstring in AdS{sub 5}×S{sup 5} around point particle solutions of the classical equations of motion. As a particular example we quantize the pure spinor string in the BMN background.

  11. The study of antioxidant activity of multicomponent vegetable puree

    Directory of Open Access Journals (Sweden)

    A. V. Trushechkin

    2013-01-01

    Full Text Available Studied the antioxidant activity of multicomponent vegetable puree, consisting of 20 % of eggplant, 20 % of zucchini, 16 % of bell peppers, 15 % of tomatoes, 14 % of carrots, 10 % of onions and 5 % of garlic. These results showed an increase in concentration of the antioxidant activity of puree and, consequently, increase its quality.

  12. Keeping consumers safe: food providers' perspectives on pureed food.

    Science.gov (United States)

    Keller, Heather H; Duizer, Lisa M

    2014-01-01

    Twelve focus groups were conducted in five sites with 80 allied health providers to identify their perspectives on providing pureed food to consumers. Thematic care analysis was completed to summarize and interpret these data. Providers' greatest concern was keeping consumers safe, and the right texture was prioritized over sensory appeal and acceptance. Providers recognized that these foods impacted the quality of life of consumers and worked to rationalize these diets with residents/patients and their families. In addition, offering foods they knew to be poorly accepted affected their self-concept as providers. As a result of these challenges, they did whatever they could in the kitchen and tableside to promote intake of pureed foods. Those in the "food chain" of pureed food provision suggested several ways to further improve these products. Greater communication between those who assist consumers with eating and those who produce the pureed food they consume is needed to promote acceptable pureed products.

  13. Behavior of CaO and Calcium in pure Magnesium

    Institute of Scientific and Technical Information of China (English)

    HA Seong-Ho; LEE Jin-Kyu; JO Hyung-Ho; JUNG Seung-Boo; KIM Shae K.

    2006-01-01

    Mg alloys exhibit a number of good properties such as low density, good castability and high specific strength.However, molten Mg and Mg alloys are ignited without the melt protective gases during melting and casting process due to their high reactivity.The purpose of this study is to investigate effects of Ca and CaO on pure Mg through microstructure observation, ignition test and phase analysis.With increasing Ca and CaO contents, the ignition resistance of Ca or CaO added pure Mg is increased and the grains are refined.As results of XRD and EDS, CaO is reduced to Ca in CaO added pure Mg.Mg2Ca phase is formed even in 0.1 wt.%CaO added pure Mg by reduction mechanism, while Mg2Ca phase is formed over 1.35 wt.% Ca added pure Mg.

  14. 一株产铁载体内生细菌对尖孢镰刀菌的拮抗作用%Antagonism of a Siderophore-producing Entophytic Bacteria on Fusarium oxysporum

    Institute of Scientific and Technical Information of China (English)

    韩松; 张守村; 黄晓艳; 林天兴; 龚明福

    2011-01-01

    In this study,a siderophore-producing endophytic strain was isolated using the improved sugar-aspartic acid (MSA) as selective medium, and then detected its antibacterial effect against fusarium wilt pathogens (Fusarium oxysporum) at different concentrations of FeCl3. This strain was identified by using morphological,biochemical and physiological characteristics, 16S rDNA sequence homology and phylogenetics analysis. The results showed that strain HS-4 produced the fluorescent siderophores (pyoverdine) on MSA medium;whose content amounted to 80% of the total siderophores. The siderophore produced by strain HS-4 has the inhibitory action against Fusarium oxysporum under the low iron condition. Endophytic bacteria strain HS-4 was identified as Bacillus atrophaeus.%通过改良蔗糖-天冬氨酸培养基筛选到一株产铁载体的内生细菌HS-4,测定了该菌在不同铁离子浓度下对棉花枯萎病致病菌尖孢镰刀菌(Fusarium oxysporum)的抑菌效果,并结合形态、生理生化、16S rDNA序列同源性和系统发育分析对菌株进行鉴定.结果表明:内生细菌HS-4在MSA培养基中产生荧光型铁载体,其铁载体相对含量为80%.该铁载体在低铁条件下对F.oxysporum具有抑制作用.内生细菌HS-4初步鉴定为萎缩芽孢杆菌(Bacillus atrophaeus ).

  15. Pure Lymphoepithelioma-Like Carcinoma Originating from the Urinary Bladder

    Directory of Open Access Journals (Sweden)

    Takashi Nagai

    2016-03-01

    Full Text Available Lymphoepithelioma-like carcinoma of the urinary bladder (LELCB is a rare variant of infiltrating urothelial carcinoma. We report a case of LELCB in a 43-year-old man. Ultrasonography and cystoscopy revealed two bladder tumors, one on the left side of the trigone and the other on the right side of the trigone. Transurethral resection of the bladder tumors was performed and pathological analysis revealed undifferentiated carcinoma. We therefore performed radical cystectomy and urinary diversion. Immunohistochemically the tumor cells were positive for cytokeratin, but negative for Epstein-Barr virus-encoded small RNA in situ hybridization as found for previous cases of LELCB. The final pathological diagnosis was a lymphoepithelioma-like variant of urothelial carcinoma with perivesical soft tissue invasion. For adjuvant systemic chemotherapy, three courses of cisplatin were administered. The patient subsequently became free of cancer 72 months postoperatively. Based on the literature, pure or predominant LELCB types show favorable prognoses due to their sensitivity to chemotherapy or radiotherapy. An analysis of the apparent diffusion coefficient (ADC values of bladder tumors examined in our institution revealed that the ADC value measured for this LELCB was relatively low compared to conventional urothelial carcinomas. This suggests that measuring the ADC value of a lymphoepithelioma-like carcinoma prior to operation may be helpful in predicting LELCB.

  16. Invasive thymoma with pure red cell aplasia and amegakaryocytic thrombocytopenia

    Directory of Open Access Journals (Sweden)

    Takuya Onuki

    2016-12-01

    Full Text Available We here describe a case involving a 67-yearold female patient who was referred to our hospital due to severe anemia (hemoglobin, 5.0 g/dL, thrombocytopenia (platelet count, 0.6×104/μL, and a mediastinal shadow with calcification noted on X-ray. On admission, an anterior mediastinal tumor was detected, and bone marrow biopsy revealed few megakaryocytes and severely reduced numbers of erythroid cells. The diagnosis was thymoma with pure red cell aplasia (PRCA and acquired amegakaryocytic thrombocytopenia (AAMT. On Day 8 of admission, the patient received immunosuppressive therapy together with cyclosporine for the 2 severe hematologic diseases, which were stabilized within 2 months. Subsequently, total thymectomy was performed. The diagnosis of the tumor invading the left lung was invasive thymoma, Masaoka- Koga stage III. The histological diagnosis was World Health Organization type AB. Thymoma accompanied with PRCA and AAMT is very rare, and, based on our case, immunotherapeutic therapy for the hematologic disorders should precede surgical intervention.

  17. Pure or Compound Dualism? Considering Afresh the Prospects of Pure Substance Dualism

    Directory of Open Access Journals (Sweden)

    Joshua Ryan Farris

    2013-06-01

    Full Text Available Substance dualism has received much attention from philosophers and theologians in contemporary literature. Whilst it may have been fashionable in the recent past to dismiss substance dualism as an unviable and academically absurd position to hold, this is no longer the case. My contention is not so much the merits of substance dualism in general, but a more specified variation of substance dualism. My specific contribution to the literature in this article is that I argue for the viability of pure substance dualism as a more satisfactory option in contrast to compound or composite varieties of substance dualism. I put forth one argument and tease out the implications that make compound dualism less than satisfactory. I conclude that, minimally, more work is required on compound variations of dualism to make it a more appealing and a philosophically satisfactory option.

  18. DEVELOPMENT OF VEGETABLE PUREES AND DRINKS BY LACTIC ACID FERMENTATION

    Directory of Open Access Journals (Sweden)

    At. Kraevska

    2014-03-01

    Full Text Available The object of this work was to investigate the possibility for development of vegetable purees and drinks by lactic acid fermentation. It was found that by the direct lactic acid fermentation of Lb.plantarum strain 226/1 the vitamin composition of vegetable purees is preserved and the biological value is increased. Drinks, prepared from fermented vegetable purees were remarkable with the pleasant lactic acid taste, the sucrose-acid composition was stable and balanced and they can be used both in the rational and in the dietary nutrition.

  19. Buffer-regulated biocorrosion of pure magnesium.

    Science.gov (United States)

    Kirkland, Nicholas T; Waterman, Jay; Birbilis, Nick; Dias, George; Woodfield, Tim B F; Hartshorn, Richard M; Staiger, Mark P

    2012-02-01

    Magnesium (Mg) alloys are being actively investigated as potential load-bearing orthopaedic implant materials due to their biodegradability in vivo. With Mg biomaterials at an early stage in their development, the screening of alloy compositions for their biodegradation rate, and hence biocompatibility, is reliant on cost-effective in vitro methods. The use of a buffer to control pH during in vitro biodegradation is recognised as critically important as this seeks to mimic pH control as it occurs naturally in vivo. The two different types of in vitro buffer system available are based on either (i) zwitterionic organic compounds or (ii) carbonate buffers within a partial-CO(2) atmosphere. This study investigated the influence of the buffering system itself on the in vitro corrosion of Mg. It was found that the less realistic zwitterion-based buffer did not form the same corrosion layers as the carbonate buffer, and was potentially affecting the behaviour of the hydrated oxide layer that forms on Mg in all aqueous environments. Consequently it was recommended that Mg in vitro experiments use the more biorealistic carbonate buffering system when possible.

  20. Dimerization of TonB is not essential for its binding to the outer membrane siderophore receptor FhuA of Escherichia coli.

    Science.gov (United States)

    Koedding, Jiri; Howard, Peter; Kaufmann, Lindsay; Polzer, Patrick; Lustig, Ariel; Welte, Wolfram

    2004-03-12

    FhuA belongs to a family of specific siderophore transport systems located in the outer membrane of Escherichia coli. The energy required for the transport process is provided by the proton motive force of the cytoplasmic membrane and is transmitted to FhuA by the protein TonB. Although the structure of full-length TonB is not known, the structure of the last 77 residues of a fragment composed of the 86 C-terminal amino acids was recently solved and shows an intertwined dimer (Chang, C., Mooser, A., Pluckthun, A., and Wlodawer, A. (2001) J. Biol. Chem. 276, 27535-27540). We analyzed the ability of truncated C-terminal TonB fragments of different lengths (77, 86, 96, 106, 116, and 126 amino acid residues, respectively) to bind to the receptor FhuA. Only the shortest TonB fragment, TonB-77, could not effectively interact with FhuA. We have also observed that the fragments TonB-77 and TonB-86 form homodimers in solution, whereas the longer fragments remain monomeric. TonB fragments that bind to FhuA in vitro also inhibit ferrichrome uptake via FhuA in vivo and protect cells against attack by bacteriophage Phi80.

  1. Effects of citric acid and the siderophore desferrioxamine B (DFO-B) on the mobility of germanium and rare earth elements in soil and uptake in Phalaris arundinacea.

    Science.gov (United States)

    Wiche, Oliver; Tischler, Dirk; Fauser, Carla; Lodemann, Jana; Heilmeier, Hermann

    2017-02-03

    Effects of citric acid and desferrioxamine B (DFO-B) on the availability of Ge and selected REEs (La, Nd, Gd, Er) to P. arundinacea were investigated. A soil dissolution experiment was conducted to elucidate the effect of citric acid and DFO-B at different concentrations (1 and 10 mmol l(-1) citric acid) on the release of Ge and REEs from soil. In a greenhouse plants of P. arundinacea were cultivated on soil and on sand cultures to investigate the effects of citric acid and DFO-B on the uptake of Ge and REEs by the plants. Addition of 10 mmol l(-1) citric acid significantly enhanced desorption of Ge and REEs from soil and uptake into soil-grown plants. Applying DFO-B enhanced the dissolution and the uptake of REEs, while no effect on Ge was observed. In sand cultures, presence of citric acid and DFO-B significantly decreased the uptake of Ge and REEs, indicating a discrimination of the formed complexes during uptake. This study clearly indicates that citric acid and the microbial siderophore DFO-B may enhance phytoextraction of Ge and REEs due to the formation of soluble complexes that increase the migration of elements in the rhizosphere.

  2. Catecholamine-stimulated Growth of Aeromonas hydrophila Requires the TonB2 Energy Transduction System but is Independent of the Amonabactin Siderophore

    Directory of Open Access Journals (Sweden)

    Yuhao Dong

    2016-12-01

    Full Text Available The growth-stimulating effects of catecholamine stress hormones have been demonstrated in many pathogens. However, catecholamine-induced growth and its underlying mechanisms remain poorly understood in Aeromonas hydrophila. The present study sought to demonstrate that norepinephrine (NE, epinephrine (Epi, dopamine (Dopa and L-dopa stimulate the growth of A. hydrophila in iron-restricted media containing serum. NE exhibited the strongest growth stimulation, which could be blocked by adrenergic antagonists. Furthermore, it was demonstrated that NE could sequester iron from transferrin, thereby providing a more accessible iron source for utilization by A. hydrophila. The deletion of the amoA gene associated with amonabactin synthesis revealed that the amonabactin siderophore is not required for NE-stimulated growth. However, the deletion of the TonB2 energy transduction system resulted in the loss of growth promotion by NE, indicating that a specific TonB-dependent outer membrane receptor might be involved in the transport of iron from transferrin. Collectively, our data show that catecholamine sensing promotes the growth of A. hydrophila in a manner that is dependent on the TonB2 energy transduction system.

  3. An extracytoplasmic function sigma factor-mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores.

    Science.gov (United States)

    Markel, Eric; Maciak, Charlene; Butcher, Bronwyn G; Myers, Christopher R; Stodghill, Paul; Bao, Zhongmeng; Cartinhour, Sam; Swingle, Bryan

    2011-10-01

    The diversity of regulatory systems encoded by bacteria provides an indication of the variety of stresses and interactions that these organisms encounter in nature. We have been investigating how the plant pathogen Pseudomonas syringae pv. tomato DC3000 responds to iron limitation and have focused on the iron starvation (IS) sigma factors to identify regulon members and to explore the mechanistic details of genetic control for this class of regulators. In the study described in this report, we used chromatin immunoprecipitation paired with high-throughput sequencing (ChIP-Seq) to screen the genome for locations associated with binding of the P. syringae IS sigma factor PSPTO_1203. We used multiple methods to demonstrate differential regulation of two genes identified in the ChIP-Seq screen and characterize the promoter elements that facilitate PSPTO_1203-dependent regulation. The genes regulated by PSPTO_1203 encode a TonB-dependent transducer (PSPTO_1206) and a cytoplasmic membrane protein (PSPTO_2145), which is located in the P. syringae pyoverdine cluster. Additionally, we identified siderophores that induce the activity of PSPTO_1203 and used this information to investigate the functional components of the signal transduction cascade.

  4. Catecholamine-Stimulated Growth of Aeromonas hydrophila Requires the TonB2 Energy Transduction System but Is Independent of the Amonabactin Siderophore

    Science.gov (United States)

    Dong, Yuhao; Liu, Jin; Pang, Maoda; Du, Hechao; Wang, Nannan; Awan, Furqan; Lu, Chengping; Liu, Yongjie

    2016-01-01

    The growth-stimulating effects of catecholamine stress hormones have been demonstrated in many pathogens. However, catecholamine-induced growth and its underlying mechanisms remain poorly understood in Aeromonas hydrophila. The present study sought to demonstrate that norepinephrine (NE), epinephrine (Epi), dopamine (Dopa), and L-dopa stimulate the growth of A. hydrophila in iron-restricted media containing serum. NE exhibited the strongest growth stimulation, which could be blocked by adrenergic antagonists. Furthermore, it was demonstrated that NE could sequester iron from transferrin, thereby providing a more accessible iron source for utilization by A. hydrophila. The deletion of the amoA gene associated with amonabactin synthesis revealed that the amonabactin siderophore is not required for NE-stimulated growth. However, the deletion of the TonB2 energy transduction system resulted in the loss of growth promotion by NE, indicating that a specific TonB-dependent outer membrane receptor might be involved in the transport of iron from transferrin. Collectively, our data show that catecholamine sensing promotes the growth of A. hydrophila in a manner that is dependent on the TonB2 energy transduction system. PMID:28018865

  5. Hydrogen bond-promoted metallic state in a purely organic single-component conductor under pressure.

    Science.gov (United States)

    Isono, Takayuki; Kamo, Hiromichi; Ueda, Akira; Takahashi, Kazuyuki; Nakao, Akiko; Kumai, Reiji; Nakao, Hironori; Kobayashi, Kensuke; Murakami, Youichi; Mori, Hatsumi

    2013-01-01

    Purely organic materials are generally insulating. Some charge-carrier generation, however, can provide them with electrical conductivity. In multi-component organic systems, carrier generation by intermolecular charge transfer has given many molecular metals. By contrast, in purely organic single-component systems, metallic states have rarely been realized although some neutral-radical semiconductors have been reported. Here we uncover a new type of purely organic single-component molecular conductor by utilizing strong hydrogen-bonding interactions between tetrathiafulvalene-based electron-donor molecules. These conductors are composed of highly symmetric molecular units constructed by the strong intra-unit hydrogen bond. Moreover, we demonstrate that, in this system, charge carriers are produced by the partial oxidation of the donor molecules and delocalized through the formation of the symmetric intra-unit hydrogen bonds. As a result, our conductors show the highest room-temperature electrical conductivity and the metallic state under the lowest physical pressure among the purely organic single-component systems, to our knowledge.

  6. Comparison of conventional and PureWave Crystal transducer in obstetric sonography.

    Science.gov (United States)

    Yu, Yi Min; Chen, Min; Xiong, Yi; Chau, Macy Mo Ching; Li, Rosita Siu Hung; Lau, Tze Kin

    2009-07-01

    To compare the quality of ultrasound images acquired by the new PureWave Crystal transducer with those acquired by a conventional transducer in 'difficult' obstetric subjects. A predefined list of ultrasound images were obtained from 35 'difficult' obstetric patients using both conventional and new PureWave Crystal transducers by a sonographer. All images were rated using a three-point scale by an independent assessor. Both the sonographer and assessor were experienced in obstetric ultrasound and blinded to the type of transducers being used. A higher score represented better image quality. The scores of each pair of images obtained by the two different ultrasound transducers were compared. The scores for images obtained by the PureWave Crystal transducer were significant higher than those by a conventional transducer, among all 10 structures examined. The new transducer was rated to enable higher diagnostic confidence (82.9%), and produced better image quality for the near field image (94.3%), the far field image (88.6%) and overall (94.3%). Ultrasound transducer incorporating the PureWave Crystal technology produces significantly better image quality for diagnostic purpose in difficult obstetric patients.

  7. Crystallography and refining mechanism of (Ti, B)-contained salts in pure aluminum

    Institute of Scientific and Technical Information of China (English)

    ZHANG Heng-hua

    2008-01-01

    It is shown from experiment that the pure B contained salt exhibits little refining effect, while the pure Ti contained salt, especially the salt containing 5Ti/1B, shows obvious refining effect on the pure aluminum. Crystallographic study indicates that Al3Ti particle is a more suitable nucleation site for the aluminum matrix than (Ti, Al)B2 type particles (TiB2, AlB2 and (Ti,Al)B2), because there exist more coherent planes with aluminum matrix in the former. Thermodynamics estimation, X-ray diffraction (XRD) and SEM detection show that the refining mechanism of (Ti, B)-contained refiners is mainly contributed to the heterogeneous nuclei of fine Al3Ti particles dispersed in the melting, which comes from the reaction between the Ti and aluminum. (Al, Ti)B2 type particle shows little or no direct refining effect, but it will reduce the size of Al3Ti since the Al3Ti nucleates and grows along the (Al, Ti)B2 type particle interface.

  8. Pure mechanical wear loss measurement in corrosive wear

    Indian Academy of Sciences (India)

    Yanliang Huang; Xiaoxia Jiang; Sizuo Li

    2000-12-01

    The method for the measurement of the pure mechanical wear loss for 321 stainless steel, 1045 steel and pure iron in the study of the synergy between corrosion and wear was studied. The methods studied included the measurement in distilled water, by cathodic protection and by adding inhibitor KI, and all were compared with the wear loss in air. The experiment showed that the pure mechanical wear losses and friction coefficients obtained by the three methods were close to each other and can be used to calculate the various wear components in the study of the interaction of corrosion and wear, but the measurements in distilled water for pure iron and 1045 steel are not recommended due to their corrosion.

  9. Production of fermented chestnut purees by lactic acid bacteria.

    Science.gov (United States)

    Blaiotta, G; Di Capua, M; Coppola, R; Aponte, M

    2012-09-03

    The objective of this study was to develop a new chestnut-based puree, in order to seasonally adjust the offer and use the surplus of undersized production, providing, at the same time, a response to the growing demand for healthy and environmentally friendly products. Broken dried chestnuts have been employed to prepare purees to be fermented with six different strains of Lactobacillus (Lb.) rhamnosus and Lactobacillus casei. The fermented purees were characterized by a technological and sensorial point of view, while the employed strains were tested for their probiotic potential. Conventional in vitro tests have indicated the six lactobacilli strains as promising probiotic candidates; moreover, being the strains able to grow and to survive in chestnut puree at a population level higher than 8 log₁₀ CFU/mL along 40 days of storage at 4 °C, the bases for the production of a new food, lactose-free and with reduced fat content, have been laid.

  10. Gravitation, Electromagnetism and the Cosmological Constant in Purely Affine Gravity

    Science.gov (United States)

    Popławski, Nikodem J.

    The Eddington Lagrangian in the purely affine formulation of general relativity generates the Einstein equations with the cosmological constant. The Ferraris-Kijowski purely affine Lagrangian for the electromagnetic field, which has the form of the Maxwell Lagrangian with the metric tensor replaced by the symmetrized Ricci tensor, is dynamically equivalent to the Einstein-Maxwell Lagrangian in the metric formulation. We show that the sum of the two affine Lagrangians is dynamically inequivalent to the sum of the analogous Lagrangians in the metric-affine/metric formulation. We also show that such a construction is valid only for weak electromagnetic fields. Therefore the purely affine formulation that combines gravitation, electromagnetism and the cosmological constant cannot be a simple sum of terms corresponding to separate fields. Consequently, this formulation of electromagnetism seems to be unphysical, unlike the purely metric and metric-affine pictures, unless the electromagnetic field couples to the cosmological constant.

  11. The effect of pure state structure on nonequilibrium dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Newman, C M; Stein, D L [Courant Institute of Mathematical Sciences, New York University, New York, NY 10012 (United States)], E-mail: newman@cims.nyu.edu, E-mail: daniel.stein@nyu.edu

    2008-06-18

    Motivated by short-range Ising spin glasses, we review some rigorous results and their consequences for the relation between the number/nature of equilibrium pure states and nonequilibrium dynamics. Two of the consequences for spin glass dynamics following an instantaneous deep quench to a temperature with broken spin flip symmetry are: (1) almost all initial configurations lie on the boundary between the basins of attraction of multiple pure states; (2) unless there are uncountably many pure states with almost all pairs having zero overlap, there can be no equilibration to a pure state as time t {yields} {infinity}. We discuss the relevance of these results to the difficulty of equilibration of spin glasses. We also review some results concerning the 'nature versus nurture' problem of whether the large-t behavior of both ferromagnets and spin glasses following a deep quench is determined more by the initial configuration (nature) or by the dynamics realization (nurture)

  12. Pure compared with mixed serous endometrial carcinoma: two different entities?

    NARCIS (Netherlands)

    Roelofsen, T.; Ham, M.A. van; Wiersma van Tilburg, J.M.; Zomer, S.F.; Bol, M.; Massuger, L.F.A.G.; Bulten, J.

    2012-01-01

    OBJECTIVE: : To analyze whether mixed compared with pure uterine papillary serous carcinoma histology affects clinical outcome, and to assess uterine papillary serous carcinoma for its association with the precursor lesion endometrial intraepithelial carcinoma. METHODS: : A multi-institution observa

  13. Phase Semantics for a Pure Noncommutative Linear Propositional Logic

    Institute of Scientific and Technical Information of China (English)

    YING Mingsheng

    1999-01-01

    We use a many-sorted language to remove commutativity from phasesemantics of linear logic and show that pure noncommutativeintuitionistic linear propositional logic plus two classical rulesenjoys the soundness and completeness with respect to completelynoncommutative phase semantics.

  14. Partial Hermitian Conjugate Separability Criteria for Pure Quantum States

    Institute of Scientific and Technical Information of China (English)

    ZHAO Xin; WU Hua; LI Yan-Song; LONG Gui-Lu

    2009-01-01

    We propose a criterion for the separability of quantum pure states using the concept of a partial Hermitian conjugate.It is equivalent to the usual positive partial transposition criteria,with a simple physical interpretation.

  15. Production of tomato puree: an alternative to conservation of locally ...

    African Journals Online (AJOL)

    Mo

    (TSS) at which tomato puree could be preserved for at least one year. Material and methods. The vegetative material used .... The microbiological analysis was made at each stage. ... and this denotes the adaptability of packaging material and.

  16. General and Optimal Scheme for Local Conversion of Pure States

    Institute of Scientific and Technical Information of China (English)

    JIN Rui-Bo; CHEN Li-Bing; WANG Fa-Qiang; LU Yi-Qun

    2008-01-01

    We present general and optimal schemes for local conversion of pure states, via one specific example. First, we give the general solution of the doubly stochastic matrix. Then, we find the general and optimal positive-operator-valued measure (POVM) to realize the local conversion of pure states. Lastly, the physical realization of the POVM is discussed. We show that our scheme has a more general and better effect than other schemes.

  17. Acquired pure megakaryocytic aplasia successfully treated with cyclosporine

    Directory of Open Access Journals (Sweden)

    Halima El Omri

    2010-12-01

    Full Text Available Acquired pure megakaryocytic aplasia is a rare hematological disorder characterized by thrombocytopenia with absent or markedly reduced megakaryocytes in the bone marrow. We report a case of a 25-year-old male diagnosed as acquired pure megakaryocytic aplasia. Treatment with prednisone and intravenous immunoglobulin failed, but he was successfully treated with cyclosporine, with complete remission after 90 days and normal platelet count maintained thereafter.

  18. Physics of pure and non-pure positron emitters for PET: a review and a discussion.

    Science.gov (United States)

    Conti, Maurizio; Eriksson, Lars

    2016-12-01

    With the increased interest in new PET tracers, gene-targeted therapy, immunoPET, and theranostics, other radioisotopes will be increasingly used in clinical PET scanners, in addition to (18)F. Some of the most interesting radioisotopes with prospective use in the new fields are not pure short-range β(+) emitters but can be associated with gamma emissions in coincidence with the annihilation radiation (prompt gamma), gamma-gamma cascades, intense Bremsstrahlung radiation, high-energy positrons that may escape out of the patient skin, and high-energy gamma rays that result in some e (+)/e (-) pair production. The high level of sophistication in data correction and excellent quantitative accuracy that has been reached for (18)F in recent years can be questioned by these effects. In this work, we review the physics and the scientific literature and evaluate the effect of these additional phenomena on the PET data for each of a series of radioisotopes: (11)C, (13)N, (15)O, (18)F, (64)Cu, (68)Ga, (76)Br, (82)Rb, (86)Y, (89)Zr, (90)Y, and (124)I. In particular, we discuss the present complications arising from the prompt gammas, and we review the scientific literature on prompt gamma correction. For some of the radioisotopes considered in this work, prompt gamma correction is definitely needed to assure acceptable image quality, and several approaches have been proposed in recent years. Bremsstrahlung photons and (176)Lu background were also evaluated.

  19. Fracture behaviors under pure shear loading in bulk metallic glasses

    Science.gov (United States)

    Chen, Cen; Gao, Meng; Wang, Chao; Wang, Wei-Hua; Wang, Tzu-Chiang

    2016-12-01

    Pure shear fracture test, as a special mechanical means, had been carried out extensively to obtain the critical information for traditional metallic crystalline materials and rocks, such as the intrinsic deformation behavior and fracture mechanism. However, for bulk metallic glasses (BMGs), the pure shear fracture behaviors have not been investigated systematically due to the lack of a suitable test method. Here, we specially introduce a unique antisymmetrical four-point bend shear test method to realize a uniform pure shear stress field and study the pure shear fracture behaviors of two kinds of BMGs, Zr-based and La-based BMGs. All kinds of fracture behaviors, the pure shear fracture strength, fracture angle and fracture surface morphology, are systematically analyzed and compared with those of the conventional compressive and tensile fracture. Our results indicate that both the Zr-based and La-based BMGs follow the same fracture mechanism under pure shear loading, which is significantly different from the situation of some previous research results. Our results might offer new enlightenment on the intrinsic deformation and fracture mechanism of BMGs and other amorphous materials.

  20. Pure and Pseudo-pure Fluid Thermophysical Property Evaluation and the Open-Source Thermophysical Property Library CoolProp

    DEFF Research Database (Denmark)

    Bell, Ian H.; Wronski, Jorrit; Quoilin, Sylvain

    2014-01-01

    Over the last few decades, researchers have developed a number of empirical and theoretical models for the correlation and prediction of the thermophysical properties of pure fluids and mixtures treated as pseudo-pure fluids. In this paper, a survey of all the state-of-the-art formulations of the...... are included in the library, as well as properties of 40 incompressible fluids and humid air. The source code for the CoolProp library is included as an electronic annex....

  1. Robust adaptive fuzzy control for a class of perturbed pure-feedback nonlinear systems

    Institute of Scientific and Technical Information of China (English)

    Jianjiang YU; Tianping ZHANG; Haijun GU

    2004-01-01

    A new design scheme of direct adaptive fuzzy controller for a class of perturbed pure-feedback nonlinear systems is proposed. The design is based on backstepping and the approximation capability of the first type fuzzy systems. A continuous robust term is adopted to minif-y the influence of modeling errors or disturbances. By introducing the modified integral-type Lyapunov function, the approach is able to avoid the requirement of the upper bound of the first time derivation of the high frequency control gain. Through theoretical analysis, the closed-loop control system is proven to be semi-globally uniformly ultimately bounded, with tracking error converging to a residual set.

  2. Structural properties of pure and Fe-doped Yb films prepared by vapor condensation

    Energy Technology Data Exchange (ETDEWEB)

    Rojas-Ayala, C., E-mail: chachi@cbpf.br [Centro Brasileiro de Pesquisas Físicas, Rio de Janeiro 22290-180, RJ (Brazil); Facultad de Ciencias Físicas, Universidad Nacional Mayor de San Marcos, Lima, P.O.B. 14-149, Lima 14 (Peru); Passamani, E.C. [Departamento de Física, Universidade Federal do Espírito Santo, Vitória 29075-910, ES (Brazil); Suguihiro, N.M. [Centro Brasileiro de Pesquisas Físicas, Rio de Janeiro 22290-180, RJ (Brazil); Litterst, F.J. [Centro Brasileiro de Pesquisas Físicas, Rio de Janeiro 22290-180, RJ (Brazil); Institut für Physik der Kondensierten Materie, Technische Universität Braunschweig, 38106 Braunschweig (Germany); Baggio Saitovitch, E. [Centro Brasileiro de Pesquisas Físicas, Rio de Janeiro 22290-180, RJ (Brazil)

    2014-10-15

    Ytterbium and iron-doped ytterbium films were prepared by vapor quenching on Kapton substrates at room temperature. Structural characterization was performed by X-ray diffraction and transmission electron microscopy. The aim was to study the microstructure of pure and iron-doped films and thereby to understand the effects induced by iron incorporation. A coexistence of face centered cubic and hexagonal close packed-like structures was observed, the cubic-type structure being the dominant contribution. There is an apparent thickness dependence of the cubic/hexagonal relative ratios in the case of pure ytterbium. Iron-clusters induce a crystalline texture effect, but do not influence the cubic/hexagonal volume fraction. A schematic model is proposed for the microstructure of un-doped and iron-doped films including the cubic- and hexagonal-like structures, as well as the iron distribution in the ytterbium matrix. - Highlights: • Pure and Fe-doped Yb films have been prepared by vapor condensation. • Coexistence of fcc- and hcp-type structures was observed. • No oxide phases have been detected. • Fe-clustering does not affect the fcc/hcp ratio, but favors a crystalline texture. • A schematic model is proposed to describe microscopically the microstructure.

  3. Extraction of distance restraints from pure shift NOE experiments

    Science.gov (United States)

    Kaltschnee, Lukas; Knoll, Kevin; Schmidts, Volker; Adams, Ralph W.; Nilsson, Mathias; Morris, Gareth A.; Thiele, Christina M.

    2016-10-01

    NMR techniques incorporating pure shift methods to improve signal resolution have recently attracted much attention, owing to their potential use in studies of increasingly complex molecular systems. Extraction of frequencies from these simplified spectra enables easier structure determination, but only a few of the methods presented provide structural parameters derived from signal integral measurements. In particular, for quantification of the nuclear Overhauser effect (NOE) it is highly desirable to utilize pure shift techniques where signal overlap normally prevents accurate signal integration, to enable measurement of a larger number of interatomic distances. However, robust methods for the measurement of interatomic distances using the recently developed pure shift techniques have not been reported to date. In this work we discuss some of the factors determining the accuracy of measurements of signal integrals in interferogram-based Zangger-Sterk (ZS) pure shift NMR experiments. The ZS broadband homodecoupling technique is used in different experiments designed for quantitative NOE determination from pure shift spectra. It is shown that the techniques studied can be used for quantitative extraction of NOE-derived distance restraints, as exemplified for the test case of strychnine.

  4. Enteroaggregative Escherichia coli isolated from Chinese diarrhea patients with high-pathogenicity island of Yersinia is involved in synthesis of siderophore yersiniabactin

    Institute of Scientific and Technical Information of China (English)

    Jing Hu; Biao Kan; Zhi-Hua Liu; Shou-Yi Yu

    2005-01-01

    AIM: To investigate the distribution of 12 high-pathogenicity island (HPI) genes and the relation between HPI genes and expression of yersiniabactin (Ybt) in enteroaggregative E.coli(EAggEC) isolated from Chinese diarrhea patients.METHODS: The distribution of 12 HPI genes was investigated by PCR and DNA hybridization in two prototype strains of EAggEC, EAggEC 17-2, EAggEC O42, and 6 clinical EAggEC isolates from China. The production of siderophore Ybt in HPI-positive strains was detected by reporter gene bioassay to determine the relation between HPI genes and expression of Ybt. Flow cytometry was used to detect fluorescent signal of the reporter strain that could designate production of Ybt.RESULTS: Seven strains were HPI-positive and one strain was HPI-negative. Six of the seven HPI-positive strains were inserted into asnT-tRNA site. Moreover, seven EAggEC HPI-positive strains revealed enhanced fluorescence signal but the EAggEC HPI-negative strain did not. However, there was a difference in Ybt expression condition and level among these seven EAggEC HPI-positive strains. Although UFT073 strain, the prototype strain of uropathogenic E.coli(UPEC), carried the complete HPI core part, we did not detect the expression of Ybt in it.CONCLUSION: EAggEC HPI-positive strains can express the Ybt system, but the presence of HPI core part does not mean the functional expression of Ybt.

  5. [New aspects of diagnosing and treating pure gonadal dysgenesis 46XY and 46XX].

    Science.gov (United States)

    Baron, J; Warenik-Szymankiewicz, A; Miedzianowski, J; Baron, J J

    1993-01-01

    Among 67 women with pure gonadal dysgenesis, karyotype 46XY was found in 46 and karyotype 46XX in 21 (26.3% of all intersexual subjects). Karyotype 46XY was either of pure type or mosaicism 45,X/46,XY (10.9%). Primary amenorrhea, underdevelopment of mammary glands and lack or poor development of pubic hair were the main complaints of the patients. In gonadal dysgenesis 46XY mammary glands were developed in 21.8% and pubic hair in 26% suggesting the presence within the gonads of the hormonally active tumor or the state after hormonal treatment. The patients with gonadal dysgenesis 46XX had lowered levels of estrogens and elevated levels of FSH and LH. Karyotype 46XY was not associated with evident changes in hormonal levels. Estrogens were both low and normal, and FSH was elevated (21.5 + 16.6 ug/ml) or normal (3.2-5.0 ng/ml). Total testosterone values were normal or slightly elevated. Such situation can be explained by the presence in some patients of tumors secreting either estrogens or androgens. Taeniform character of gonads was observed by ultrasonography whenever the presence of gonadal tumor was excluded. Histology of specimens taken from gonads or tumors demonstrated the presence of dysgerminoma or gonadoblastoma type of malignancy in 53.1%, foci or proliferation of the Leydig cells in 31.3% and typical morphology of residual gonads without germinal cells only in 12.5%. The differentiation between pure gonadal dysgenesis 46XX and primary ovarian insufficiency is required whenever no characteristic pattern emerges from clinical, hormonal, cytogenetic or ultrasonographic examination. Diagnosis of pure gonadal dysgenesis 46XX can be finally confirmed by the absence of gonocytes in the residual gonad. Besides of removal of gonads or tumors by surgery, the treatment of patients with 46XY karyotype consists in cyclic administration of estrogens and progestagens restoring menstruation and bringing development of secondary sex attributes.

  6. Fine Needle Aspiration Cytology in Diagnosis of Pure Neuritic Leprosy

    Directory of Open Access Journals (Sweden)

    Bipin Kumar

    2011-01-01

    Full Text Available Leprosy is a chronic infection affecting mainly the skin and peripheral nerve. Pure neuritic form of this disease manifests by involvement of the nerve in the absence of skin lesions. Therefore, it can sometimes create a diagnostic problem. It often requires a nerve biopsy for diagnosis, which is an invasive procedure and may lead to neural deficit. Fine needle aspiration cytology (FNAC of an affected nerve can be a valuable and less invasive procedure for the diagnosis of such cases. We report five suspected cases of pure neuritic Hansen's disease involving the common and superficial peroneal, ulnar, and median nerve, who underwent FNAC. Smears revealed nerve fibers infiltrated by chronic inflammatory cells in all cases, presence of epithelioid cells granulomas, and Langhans giant cells in three cases, and acid fast bacilli in two cases. In conclusion, FNAC is a safe, less invasive, and time saving procedure for the diagnosis of pure neuritic leprosy.

  7. Effect of vanadium carbide on commercial pure aluminum

    Science.gov (United States)

    Sun, Hua-ping; Wu, Jun; Tang, Tian; Fan, Bo; Tang, Zheng-hua

    2017-07-01

    The effect of vanadium carbide (VC) on the grain size of commercial pure aluminum was experimentally investigated by varying the content of VC, the holding time, and casting temperature. The refining efficiencies of VC and Al5Ti1B were also compared. The refined samples of commercial pure aluminum were examined using optical microscopy, scanning electron microscopy (SEM) and energy-dispersive spectroscopy (EDS). The results suggest that VC is a good refiner of commercial pure aluminum. The addition of only 0.3wt% VC can decrease the grain size of aluminum to 102 μm, whereas the casting temperature and holding time have little effect on the grain size. The refining efficiency of VC is better than that of Al5Ti1B. The VC particles in molten aluminum act as nuclei and the grain refinement of aluminum alloys by VC particles is achieved via heterogeneous nucleation.

  8. The neuroanatomy of pure apraxia of speech in stroke.

    Science.gov (United States)

    Graff-Radford, Jonathan; Jones, David T; Strand, Edythe A; Rabinstein, Alejandro A; Duffy, Joseph R; Josephs, Keith A

    2014-02-01

    The left insula or Broca's area have been proposed as the neuroanatomical correlate for apraxia of speech (AOS) based on studies of patients with both AOS and aphasia due to stroke. Studies of neurodegenerative AOS suggest the premotor area and the supplementary motor areas as the anatomical correlates. The study objective was to determine the common infarction area in patients with pure AOS due to stroke. Patients with AOS and no or equivocal aphasia due to ischemic stroke were identified through a pre-existing database. Seven subjects were identified. Five had pure AOS, and two had equivocal aphasia. MRI lesion analysis revealed maximal overlap spanning the left premotor and motor cortices. While both neurodegenerative AOS and stroke induced pure AOS involve the premotor cortex, further studies are needed to establish whether stroke-induced AOS and neurodegenerative AOS share a common anatomic substrate.

  9. Pure gravities via color-kinematics duality for fundamental matter

    Energy Technology Data Exchange (ETDEWEB)

    Johansson, Henrik [Theory Division, Physics Department, CERN, CH-1211 Geneva 23 (Switzerland); Ochirov, Alexander [Institut de Physique Théorique, CEA-Saclay, F-91191 Gif-sur-Yvette cedex (France)

    2015-11-06

    We give a prescription for the computation of loop-level scattering amplitudes in pure Einstein gravity, and four-dimensional pure supergravities, using the color-kinematics duality. Amplitudes are constructed using double copies of pure (super-)Yang-Mills parts and additional contributions from double copies of fundamental matter, which are treated as ghosts. The opposite-statistics states cancel the unwanted dilaton and axion in the bosonic theory, as well as the extra matter supermultiplets in the supergravity theories. As a spinoff, we obtain a prescription for obtaining amplitudes in supergravities with arbitrary non-self-interacting matter. As a prerequisite, we extend the color-kinematics duality from the adjoint to the fundamental representation of the gauge group. We explain the numerator relations that the fundamental kinematic Lie algebra should satisfy. We give nontrivial evidence supporting our construction using explicit tree and loop amplitudes, as well as more general arguments.

  10. Liquid structure of pure iron by X-ray diffraction

    Institute of Scientific and Technical Information of China (English)

    Jun Luo; Qijie Zhai; Pei Zhao; Xubo Qin

    2004-01-01

    The liquid structure of pure iron at 1540, 1560 and 1580℃ was studied by X-ray diffraction. The results show that near the melting point there is a medium-range order structure that fades away with the increasing temperature. The average nearest distance of atoms is almost independent of the melts temperature, but the average coordination number, the atom cluster size and the atom number in an atom cluster all decrease with the increasing temperature of the melt. Near the melting point there area lot of atom clusters in the pure iron melt. The atom cluster of pure iron has the body-centered cubic lattices, which are kept from the solid state. And the body-centered cubic lattices connect into network by occupying a same edge. The atoms in the surrounding of the atom clusters are arranged disorderly.

  11. Acquired pure red cell aplasia in a child.

    Directory of Open Access Journals (Sweden)

    Sharma R

    2002-01-01

    Full Text Available Primary acquired pure red cell aplasia is a rare occurrence in childhood. An eleven-year old boy presented to us with pallor, which required multiple packed red cell transfusions. He did not have hepatosplenomegaly, jaundice or lymphadenopathy. Bone marrow examination revealed the diagnosis of pure red cell aplasia. All possible investigations were done to exclude secondary causes of pure red cell aplasia. No secondary cause was found on investigations. Rheumatoid factor and anti-nuclear antibodies were positive. He was started on oral steroids, to which he did not respond. He was then given cyclosporine A. Response to cyclosporine was dramatic and the child now does not require any transfusions.

  12. [Anesthetic management for a patient with pure autonomic failure].

    Science.gov (United States)

    Kida, K; Mori, M; Yoshitake, S; Sendaya, K; Iwasaka, H; Taniguchi, K

    1997-06-01

    Pure autonomic failure is characterized by orthostatic hypotension, sweating disorder, urinary incontinence, and syncope. A 64 year-old man with pure autonomia failure was scheduled for suprapubic prostatectomy. We monitoring direct arterial pressure and inserted pulmonary artery catheter prior to the induction of anesthesia. General anesthesia was induced with diazepam 10 mg, fentanyl 0.3 mg, and vecuronium 8 mg for tracheal intubation. Anesthesia was maintained with sevoflurane (0.2-1.5%), 60% nitrous oxide in oxygen supplemented with intermittent epidural anesthesia. During anesthesia, blood loss was immediately replaced with banked blood because autonomic failure could not compensate hypovolemia well. Epidural anesthesia in this patient was considered to cause less hypotension than in patients with normal autonomic function. Therefore, we think epidural anesthesia is a useful anesthesia method for patients with pure autonomic failure. The emergence from anesthesia was smooth and no complications were seen during the perioperative period.

  13. Tetroazolemycins A and B, Two New Oxazole-Thiazole Siderophores from Deep-Sea Streptomyces olivaceus FXJ8.012

    Directory of Open Access Journals (Sweden)

    Ying Huang

    2013-05-01

    Full Text Available Two new oxazole/thiazole derivatives, named tetroazolemycins A (1 and B (2, have been isolated from the acetone extract of the mycelium of Streptomyces olivaceus FXJ8.012 derived from deep-sea water, together with three known compounds, spoxazomicins A–C (3–5, isolated from the fermentation supernatant. The planar structure and relative configuration of tetroazolemycins were elucidated by a combination of spectroscopic analyses, including 1D- and 2D-NMR techniques, and showed to be new pyochelin-type antibiotics. Both compounds showed metal ion-binding activity and their Zn2+ complexes exhibited weak activity against pathogenic bacteria Klebsiella pneumoniae.

  14. Crystal structure of pure ZrO{sub 2} nanopowders

    Energy Technology Data Exchange (ETDEWEB)

    Lamas, D.G. [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina)]. E-mail: dlamas@citefa.gov.ar; Rosso, A.M. [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Anzorena, M. Suarez [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Fernandez, A. [DEICOR - Departamento de Investigaciones en Corrosion, CITEFA, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Bellino, M.G. [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Cabezas, M.D. [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Walsoee de Reca, N.E. [CINSO - Centro de Investigaciones en Solidos, CITEFA-CONICET, J.B. de La Salle 4397 (1603) Villa Martelli, Pcia. de Buenos Aires (Argentina); Craievich, A.F. [Instituto de Fisica, FAP, USP, Travessa R da Rua do Matao, No.187, Cidade Universitaria (05508-900) Sao Paulo (Brazil)

    2006-09-15

    The crystal structure of pure (undoped) zirconia nanopowders synthesized by different wet-chemical routes has been investigated by synchrotron X-ray diffraction. Whereas some previous authors reported the retention of the cubic phase in similar materials, we demonstrate here that pure zirconia nanopowders with average crystallite sizes ranging from 5 to 10 nm exhibit the tetragonal phase. In addition, our results suggest that a tetragonal-to-cubic transition for decreasing crystallite size could eventually occur at a very small critical crystallite size.

  15. Optimization of Magnesium Metal into Commercially Pure Aluminium

    Directory of Open Access Journals (Sweden)

    Vandana J Rao

    2014-02-01

    Full Text Available The present investigation, involve development of Al-Mg systems by addition of magnesium into commercially pure aluminium. The amounts of magnesium added into commercially pure aluminium are of 1 and 2 wt%. The recoveries of magnesium are around 85-90%.Remaining Mg react with oxygen and float on the liquid aluminium. Presence of magnesium creates two phenomena. One is solid solution hardening and other is intermetallics formation. Both the phenomena checked by microstructural changes and by measuring the electrical conductivity values. By increasing the Mg, content mechanical properties (hardness and tensile strength increases and electrical conductivity decreases.

  16. Pontine tegmentum hematoma: report of a case with pure hemiplegia

    Directory of Open Access Journals (Sweden)

    MILAGRES ANTONIO CARLOS DE PÁDUA

    1998-01-01

    Full Text Available The authors report the case of a 50 year-old hypertensive male patient with a pontine hematoma. The clinical presentation was characterized by pure pyramidal deficit signs (no other signs or symptoms were present. A pure hemiplegia syndrome, although common in supratentorial lesions, is considered to be a rare event in pontine vascular lesions. The pathophysiologic mechanisms of these neurological findings are unclear. The exclusive involvement of the pyramidal tract in this case is likely due to a variation in the vascular anatomy of the pons but, in some cases, a vascular malformation may be the cause.

  17. Tailored jump operators for purely dissipative quantum magnetism

    Science.gov (United States)

    Weimer, Hendrik

    2017-01-01

    I propose an architecture for the realization of dissipative quantum many-body spin models. The dissipative processes are mediated by interactions with auxiliary particles and lead to a widely tunable class of correlated quantum jump operators. These findings enable the investigation of purely dissipative spin models, where coherent dynamics is entirely absent. I provide a detailed review of a recently introduced variational method to analyze such dissipative quantum many-body systems, and I discuss a specific example in terms of a purely dissipative Heisenberg model, for which I find an additional disordered phase that is not present in the corresponding ground state phase diagram.

  18. Tailored jump operators for purely dissipative quantum magnetism

    CERN Document Server

    Weimer, Hendrik

    2016-01-01

    I propose an archtitecture for the realization of dissipative quantum many-body spin models. The dissipative processes are mediated by interactions with auxiliary particles and lead to a widely tunable class of correlated quantum jump operators. These findings enable the investigation of purely dissipative spin models, where coherent dynamics is entirely absent. I provide a detailed review of a recently introduced variational method to analyze such dissipative quantum many-body systems, and I discuss a specific example in terms of a purely dissipative Heisenberg model, for which I find an additional disordered phase that is not present in the corresponding ground state phase diagram.

  19. Design of convex hull plate forming by pure line heating

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xue-biao; JI Zhuo-shang; LIU Yu-jun

    2004-01-01

    This paper presents a ship-hull plate forming way by pure line heating. The heating lines forming the required bending angle is determined by curvature analysis method. Heating along the calculated heating lines results in bland plate with initial transverse curvature. Then, the plate with desired convex shape can be obtained by heating in the longitudinal edge. This is the whole forming process by pure line heating. This paper presents a method of plane development for ship-hull plate with B-spline surface representation, and provides the shrinkage heating lines in the forming process. This forming way would facilitate temperature control and make plate forming automatically easy.

  20. Conservation laws and evolution of pure states into mixed states

    Science.gov (United States)

    Liu, Jun

    1993-09-01

    Using the formulation of Banks, Peskin and Susskind (BPS), evolution equations are constructed for the quantum mechanical density matrix ϱ with operators which do not commute with the hamiltonian. These equations evolve pure states into mixed states, preserve the normalization and positivity of ϱ, and most importantly, conserve energy. Thus, these examples show that the conservation laws do not necessarily forbid the evolution of pure states into mixed states, in contrast to the case of a quantum mechanical system with random sources studied specifically by BPS. It remains to generalize these quantum mechanical examples to the more interesting case of quantum field theory.

  1. Scalable classification by clustering: Hybrid can be better than Pure

    Institute of Scientific and Technical Information of China (English)

    Deng Shengchun; He Zengyou; Xu Xiaofei

    2007-01-01

    The problem of scalable classification by clustering in large databases was discussed. Clustering based classification method first generates clusters using clustering algorithms . To classify new coming data points , it finds the k nearest clusters of the data point as neighbors , and assign each data point to the dominant class of these neighbors . Existing algorithms incorporated class information in making clustering decisions and produced pure clusters (each cluster associated with only one class) . We presented hybrid cluster based algorithms , which produce clusters by unsupervised clustering and allow each cluster associated with multiple classes . Experimental results show that hybrid cluster based algorithms outperform pure ones in both classification accuracy and training speed.

  2. Pure Spinors, Free Differential Algebras, and the Supermembrane

    CERN Document Server

    Fré, P; Fre', Pietro; Grassi, Pietro Antonio

    2007-01-01

    The lagrangian formalism for the supermembrane in any 11d supergravity background is constructed in the pure spinor framework. Our gauge-fixed action is manifestly BRST, supersymmetric, and 3d Lorentz invariant. The relation between the Free Differential Algebras (FDA) underlying 11d supergravity and the BRST symmetry of the membrane action is exploited. The "gauge-fixing" has a natural interpretation as the variation of the Chevalley cohomology class needed for the extension of 11d super-Poincare' superalgebra to M-theory FDA. We study the solution of the pure spinor constraints in full detail.

  3. Probabilistic teleportation of an arbitrary pure state of two atoms

    Institute of Scientific and Technical Information of China (English)

    Yang Zhen-Biao; Wu Huai-Zhi; Su Wan-Jun

    2007-01-01

    In the context of microwave cavity QED, this paper proposes a new scheme for teleportation of an arbitrary pure state of two atoms. The scheme is very different from the previous ones which achieve the integrated state measurement,it deals in a probabilistic but simplified way. In the scheme, no additional atoms are involved and thus only two atoms are required to be detected. The scheme can also be used for the teleportation of arbitrary pure states of many atoms or two-mode cavities.

  4. Calculation of interfacial tensions with gradient theory. I. Pure and Pseudo-Pure Fluids. II. Binary Systems

    DEFF Research Database (Denmark)

    Zuo, You-Xiang; Stenby, Erling Halfdan

    1997-01-01

    In this research work, the gradient theory (GT) of inhomogeneous fluids was used to calculate interfacial tensions (IFTs). The correlations of the influence parameter are presented for pure hydrocarbons, which can improve the scaling behavior of pure fluids under near-critical conditions. The ove...... the agreement is reasonably accurate in the near-critical region as the models reveal classical scaling behavior. To predict low IFTs accurately ((sigma)....... The overall average absolute deviations (ADDs) of the calculated IFTs from the GT model with the SRK, PR and PT equations of state (EOS´s) for 86 non-polar and weakly polar pure substances are 2.34%, 2.10% and 2.29%, respectively. At low pressure, the lumping method proposed by Leibovici [Leibovici, C.F, 1993...

  5. Dissipation and memory effects in pure glue deconfinement

    CERN Document Server

    Fraga, E S; Krein, G; Mizher, A J; Palhares, L F

    2007-01-01

    We investigate the effects of dissipation in the deconfining transition for a pure SU(2) gauge theory. Using an effective model for the order parameter, we study its Langevin evolution numerically, and compare results from local additive noise dynamics to those obtained considering an exponential non-local kernel for early times.

  6. A pure-sampling quantum Monte Carlo algorithm.

    Science.gov (United States)

    Ospadov, Egor; Rothstein, Stuart M

    2015-01-14

    The objective of pure-sampling quantum Monte Carlo is to calculate physical properties that are independent of the importance sampling function being employed in the calculation, save for the mismatch of its nodal hypersurface with that of the exact wave function. To achieve this objective, we report a pure-sampling algorithm that combines features of forward walking methods of pure-sampling and reptation quantum Monte Carlo (RQMC). The new algorithm accurately samples properties from the mixed and pure distributions simultaneously in runs performed at a single set of time-steps, over which extrapolation to zero time-step is performed. In a detailed comparison, we found RQMC to be less efficient. It requires different sets of time-steps to accurately determine the energy and other properties, such as the dipole moment. We implement our algorithm by systematically increasing an algorithmic parameter until the properties converge to statistically equivalent values. As a proof in principle, we calculated the fixed-node energy, static α polarizability, and other one-electron expectation values for the ground-states of LiH and water molecules. These quantities are free from importance sampling bias, population control bias, time-step bias, extrapolation-model bias, and the finite-field approximation. We found excellent agreement with the accepted values for the energy and a variety of other properties for those systems.

  7. Determination of Impurity Elements in Pure Cerium Oxide Product

    Institute of Scientific and Technical Information of China (English)

    Li Peizhong; Chen Limin; Li Jie

    2004-01-01

    Determination of the rare earth impurity in pure cerium oxide is done by ICP-MS.The interference and other factors which affect analytical results were discussed.The accuracy are between 0.81% ~ 11.98% and the recoveries of standard addition are 96% ~ 112.5%.This method can meet the demand for product inspection.

  8. PURE progress in innovative IPM in pome fruit in Europe

    NARCIS (Netherlands)

    Heijne, B.; Helsen, H.H.M.; Caffi, T.; Köhl, J.; Riemens, M.M.; Simon, S.; Buurma, J.S.; Hennen, W.H.G.J.

    2015-01-01

    Research on innovative Integrated Pest Management (IPM) tools is done onstation and on-farm in the PURE project. The idea is that IPM tools are tested under well-defined conditions in experimental orchards. Subsequently, they are tested in commercial orchards as part of a total IPM system where d

  9. Low Temperature PureB Technology for CMOS Compatible Photodetectors

    NARCIS (Netherlands)

    Mohammadi, V.

    2015-01-01

    In this thesis, conventional high temperature (HT, 700 °C) PureB technology is optimized in order to fabricate detectors with improved key parameters such as the spatial uniformity of the responsivity. A novel technology for low temperature (LT, 400 °C) boron deposition is developed providing a unif

  10. Complex windmill transformation producing new purely magnetic fluids

    NARCIS (Netherlands)

    Lozanovski, L.; Wylleman, L.

    2011-01-01

    Minimal complex windmill transformations of G2IB(ii) spacetimes (admitting a two-dimensional Abelian group of motions of the so-called Wainwright B(ii) class) are defined and the compatibility with a purely magnetic Weyl tensor is investigated. It is shown that the transformed spacetimes cannot be p

  11. Alkali suppression for pure Radioactive Ion Beam (RIB) production

    CERN Document Server

    E. Bouquerel, R. Catherall, M. Eller, J. Lettry, S. Marzari, T. Stora and the ISOLDE

    The ISOLDE facility at CERN has constantly developed new ion beams with betterpurity and improved yields over the last decades. Chemical selectivity for the productionof pure RIBs can be achieved by condensation of less volatile species in the transferline between the target and the ion source and by selective ionisation schemes such asthat provided by Resonance Ionization Laser Ion Source (RILIS)...

  12. Demonstration of Kirchhoff's First Law for Pure Spin Currents

    Science.gov (United States)

    Batley, Joseph; Rosamond, M. C.; Ali, M.; Linfield, E. H.; Burnell, G.; Hickey, B. J.

    In conventional electronics a fundamental component of circuit design is the principle of fan-out, which allows multiple operations to be performed in order to build up complex logical procedures. A fan-out device relies on the condition that electrical currents obey Kirchoff's laws and in order for spin-logic to be viable, the same must be shown for pure spin currents. Both fan-out and fan-in experiments have been performed to observe how spin currents behave in a multi-terminal circuit. The development of a 3-dimensional nonlocal IV and matrix fitting method provides information about each spin current, along with the thermal current generated at the injection point, and how they interact with each other. The fan-out geometry demonstrates that a pure spin current will divide between the different branches in a circuit, with a magnitude determined through the spin resistances of each arm. The fan-in measurements demonstrate that two pure spin currents will add and subtract with each other in a conventional manner expected from Kirchhoff's first law. These experiments have demonstrated the symmetry of pure spin currents with respect to the injection current and shown that they obey Kirchhoff's current law.

  13. About the Role of Visual Field Defects in Pure Alexia

    Science.gov (United States)

    Pflugshaupt, Tobias; Gutbrod, Klemens; Wurtz, Pascal; von Wartburg, Roman; Nyffeler, Thomas; de Haan, Bianca; Karnath, Hans-Otto; Mueri, Rene M.

    2009-01-01

    Pure alexia is an acquired reading disorder characterized by a disproportionate prolongation of reading time as a function of word length. Although the vast majority of cases reported in the literature show a right-sided visual defect, little is known about the contribution of this low-level visual impairment to their reading difficulties. The…

  14. Number Reading in Pure Alexia--A Review

    Science.gov (United States)

    Starrfelt, Randi; Behrmann, Marlene

    2011-01-01

    It is commonly assumed that number reading can be intact in patients with pure alexia, and that this dissociation between letter/word recognition and number reading strongly constrains theories of visual word processing. A truly selective deficit in letter/word processing would strongly support the hypothesis that there is a specialized system or…

  15. Classical Solutions of SU(3) Pure Yang-Mills Theory

    OpenAIRE

    2002-01-01

    Regular classical solutions of pure SU(3) gauge theories, in Minkowsky spacetime, are computed in the Landau gauge. The classical fields have an intrinsic energy scale and produce quark confinement if interpreted in the sense of a nonrelativistic potential. Moreover, the quark propagator in the background of these fields vanishes at large positive and negative time and space separations.

  16. Cyclic Pure Greedy Algorithms for Recovering Compressively Sampled Sparse Signals

    DEFF Research Database (Denmark)

    Sturm, Bob L.; Christensen, Mads Græsbøll; Gribonval, Remi

    2011-01-01

    The pure greedy algorithms matching pursuit (MP) and complementary MP (CompMP) are extremely computationally simple, but can perform poorly in solving the linear inverse problems posed by the recovery of compressively sampled sparse signals. We show that by applying a cyclic minimization principl...

  17. Non-thermal production of pure hydrogen from biomass : HYVOLUTION

    NARCIS (Netherlands)

    Claassen, P.A.M.; Vrije, de G.J.

    2006-01-01

    HYVOLUTION is the acronym of an Integrated Project ¿Non-thermal production of pure hydrogen from biomass¿ which has been granted in the Sixth EU Framework Programme on Research, Technological Development and Demonstration, Priority 6.1.ii, Sustainable Energy Systems. The aim of HYVOLUTION: ¿Developm

  18. Physical, chemical and electrochemical properties of pure and doped ceria

    DEFF Research Database (Denmark)

    Mogensen, Mogens Bjerg; Sammes, N.M.; Tompsett, G.A.

    2000-01-01

    This paper gives an extract of available data on the physical, chemical, electrochemical and mechanical properties of pure and doped ceria, predominantly in the temperature range from 200 to 1000 degrees C. Several areas are pointed out where further research is needed in order to make a better...

  19. On the pure Gauss-Bonnet vacuum solution

    CERN Document Server

    Dadhich, Naresh

    2010-01-01

    For the matter fields remaining confined to the usual four dimensional spacetime, if the gravitational dynamics in higher dimensions is purely governed by the Gauss-Bonnet vacuum equation, it turns out that it has non flat solution for spherically symmetric spacetime only in five dimensions. Does it indicate that the gravity cannot go beyond five dimensions?

  20. Surface Initiated Polymerizations via e-ATRP in Pure Water

    NARCIS (Netherlands)

    Hosseiny, Seyed Schwan; van Rijn, Patrick

    2013-01-01

    Here we describe the combined process of surface modification with electrochemical atom transfer radical polymerization (e-ATRP) initiated from the surface of a modified gold-electrode in a pure aqueous solution without any additional supporting electrolyte. This approach allows for a very controlle

  1. Equal channel angular pressing of pure aluminium—an analysis

    Indian Academy of Sciences (India)

    M Saravanan; R M Pillai; B C Pai; M Brahmakumar; K R Ravi

    2006-12-01

    Equal channel angular pressing (ECAP) is a novel technique for producing ultra fine grain structures in submicron level by introducing a large amount of shear strain into the materials without changing the billet shape or dimensions. This process is well suited for aluminium alloys and is capable of producing ultra fine grain structures with grain sizes falling between 200 and 500 nm. The present study attempts to apply ECAP technique to 99.5% pure aluminium and characterize the resulting aluminium by optical metallography, atomic force microscopy (AFM) and hardness measurement. ECAP of 99.5% pure aluminium produces ultrafine grain structure of about 620 nm after 8 passes. Despite an increase in the hardness from 23 to 47 BHN up to 6 passes, it decreases slightly for seventh and eighth passes. The results are compared with the already existing results available on pure aluminium. Analysis of the results of this investigation with those available in the literature has revealed that the number of passes essential to achieve a homogeneous microstructure in pure Al increases, while the ultimate equilibrium grain size obtained becomes finer with decreasing purity.

  2. pupyMPI - MPI implemented in pure Python

    DEFF Research Database (Denmark)

    Bromer, Rune; Hantho, Frederik; Vinter, Brian

    2011-01-01

    As distributed memory systems have become common, the de facto standard for communication is still the Message Passing Interface (MPI). pupyMPI is a pure Python implementation of a broad subset of the MPI 1.3 specifications that allows Python programmers to utilize multiple CPUs with datatypes...

  3. History and theology of Korean pentecostalism: Sunbogeum (pure gospel) Pentecostalism

    NARCIS (Netherlands)

    Kim, Ig-Jin

    2003-01-01

    The object of this study is to investigate the context and texture of Korean Pentecostalism - Sunbogeum (pure Gospel) Pentecostalism. This study shows that Sunbogeum Pentecostalism is the complex product of four factors: first, Korean religio-social circumstances; second, the doctrine of classical

  4. ALMOST PERIODICITY FOR AN IMPULSIVE PURE DELAY LOGISTIC EQUATION

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    By employing a fixed point theorem in cones,we investigate the existence of almost periodic solutions to an impulsive pure delay Logistic equation. A set of suffcient conditions for the existence of almost periodic solutions to the equation are obtained.

  5. Non-thermal production of pure hydrogen from biomass : HYVOLUTION

    NARCIS (Netherlands)

    Claassen, P.A.M.; Vrije, de G.J.

    2006-01-01

    HYVOLUTION is the acronym of an Integrated Project ¿Non-thermal production of pure hydrogen from biomass¿ which has been granted in the Sixth EU Framework Programme on Research, Technological Development and Demonstration, Priority 6.1.ii, Sustainable Energy Systems. The aim of HYVOLUTION:

  6. Three Variations on a Theme: The Power of Pure Empathy.

    Science.gov (United States)

    Kottler, Jeffrey A.; Montgomery, Marilyn J.; Marbley, Aretha Faye

    1998-01-01

    With the counseling profession's increased emphasis on developing brief therapies, applying innovative techniques, and measuring outcomes, helping someone feel understood is sometimes neglected. Three narratives by humanistic practitioners illustrate the value of pure empathy in our work with clients, students, and others in our diverse…

  7. Controlled synthesis and optical properties of pure gold nanoparticles

    NARCIS (Netherlands)

    Singh, A.K.; Rai, A.K.; Bicanic, D.D.

    2009-01-01

    Gold nanoparticles were synthesized by laser ablation of a gold metallic disc at wavelengths of 532 nm and 355 nm with 7 ns pulse duration in the pure water. The colloidal gold nanoparticles were characterized by ultraviolet-visible absorption spectroscopy, transmission electron microscopy, and

  8. 77 FR 59979 - Pure Magnesium (Granular) From China

    Science.gov (United States)

    2012-10-01

    ... this five-year review. Background The Commission instituted this review on February 1, 2012 (77 FR 5049) and determined on May 7, 2012 that it would conduct an expedited review (77 FR 32668, June 1, 2012... COMMISSION Pure Magnesium (Granular) From China Determination On the basis of the record \\1\\ developed in...

  9. The scroll of Pure Brightness on the River

    Institute of Scientific and Technical Information of China (English)

    2004-01-01

    <正>The scroll of Pure Brightness on the River drawn by the Chinese tradi tional painting master Zeduan Zhang depicts a well-off scene of Dongjing (present city of Kaifeng), which was the capital of the Northern Song dynasty a thousand year ago and was the top-ranking metropolis at that time. The scroll

  10. GGI Lectures on the Pure Spinor Formalism of the Superstring

    CERN Document Server

    Bedoya, Oscar A

    2009-01-01

    Notes taken by Oscar A. Bedoya of lectures of Nathan Berkovits in June 2009 at the Galileo Galilei Institute School "New Perspectives in String Theory". Topics include the pure spinor superparticle and superstring, tree and loop amplitudes, Ramond-Ramond backgrounds, and open problems.

  11. On the minimization of Hamiltonians over pure Gaussian states

    DEFF Research Database (Denmark)

    Derezinski, Jan; Napiorkowski, Marcin; Solovej, Jan Philip

    2013-01-01

    A Hamiltonian defined as a polynomial in creation and annihilation operators is considered. After a minimization of its expectation value over pure Gaussian states, the Hamiltonian is Wick-ordered in creation and annihillation operators adapted to the minimizing state. It is shown...

  12. Controlled synthesis and optical properties of pure gold nanoparticles

    NARCIS (Netherlands)

    Singh, A.K.; Rai, A.K.; Bicanic, D.D.

    2009-01-01

    Gold nanoparticles were synthesized by laser ablation of a gold metallic disc at wavelengths of 532 nm and 355 nm with 7 ns pulse duration in the pure water. The colloidal gold nanoparticles were characterized by ultraviolet-visible absorption spectroscopy, transmission electron microscopy, and fluo

  13. Optimization of Jatropha curcas pure plant oil production

    NARCIS (Netherlands)

    Subroto, Erna

    2015-01-01

    The use of pure plant oils as fuel, either directly or after conversion of the oil to bio-diesel, is considered to be one of the potential contributions to the transformation of the current fossil oil based economy to a sustainable bio-based one. The production of oil producing seeds using plants

  14. Light-Induced Absorption in Nominally Pure Bismuth Silicon Oxide

    Institute of Scientific and Technical Information of China (English)

    李飞飞; 许京军; 孔勇发; 黄辉; 张光寅; 杨春晖; 徐玉恒

    2001-01-01

    Light-induced absorption in the nominally pure bismuth silicon oxide is investigated experimentally and the result shows that it consists of transient and persistent parts. The experimental evidence is analysed based on the model of three groups of trap (donor) centres.

  15. History and theology of Korean pentecostalism: Sunbogeum (pure gospel) Pentecostalism

    NARCIS (Netherlands)

    Kim, Ig-Jin

    2003-01-01

    The object of this study is to investigate the context and texture of Korean Pentecostalism - Sunbogeum (pure Gospel) Pentecostalism. This study shows that Sunbogeum Pentecostalism is the complex product of four factors: first, Korean religio-social circumstances; second, the doctrine of classical P

  16. Pure E and B polarization maps via Wiener filtering

    CERN Document Server

    Bunn, Emory F

    2016-01-01

    In order to draw scientific conclusions from observations of cosmic microwave background (CMB) polarization, it is necessary to separate the contributions of the E and B components of the data. For data with incomplete sky coverage, there are ambiguous modes, which can be sourced by either E or B signals. Techniques exist for producing "pure" E and B maps, which are guaranteed to be free of cross-contamination, although the standard method, which involves constructing an eigenbasis, has a high computational cost. We show that such pure maps can be thought of as resulting from the application of a Wiener filter to the data. This perspective leads to far more efficient methods of producing pure maps. Moreover, by expressing the idea of purification in the general framework of Wiener filtering (i.e., maximization of a posterior probability), it leads to a variety of generalizations of the notion of pure E and B maps, e.g., accounting for noise or other contaminants in the data as well as correlations with temper...

  17. Simple reaction time for broadband sounds compared to pure tones.

    Science.gov (United States)

    Schlittenlacher, Josef; Ellermeier, Wolfgang; Avci, Gül

    2017-02-01

    Although many studies have explored the relation between reaction time (RT) and loudness, including effects of intensity, frequency, and binaural summation, comparable work on spectral summation is rare. However, most real-world sounds are not pure tones and typically have bandwidths covering several critical bands. Since comparing to a 1-kHz pure tone, the reference tone, is important for loudness measurement and standardization, the present work focuses on comparing RTs for broadband noise to those for 1-kHz pure tones in three experiments using different spectral and binaural configurations. The results of Experiments 1 and 2 yield good quantitative agreement with spectral loudness summation models for moderate and high sound pressure levels, measured using both pink noise covering almost the entire hearing range and bandpass-filtered pink noise with different center frequencies. However, at lower levels, the RT measurements yield an interaction of level and bandwidth, which is not in line with loudness scaling data. In Experiment 3, which investigated the binaural summation of broadband sounds, the binaural gain for white noise was determined to be 9 dB, which is somewhat larger than what had been found in previous RT measurements using 1-kHz pure tones.

  18. About the Role of Visual Field Defects in Pure Alexia

    Science.gov (United States)

    Pflugshaupt, Tobias; Gutbrod, Klemens; Wurtz, Pascal; von Wartburg, Roman; Nyffeler, Thomas; de Haan, Bianca; Karnath, Hans-Otto; Mueri, Rene M.

    2009-01-01

    Pure alexia is an acquired reading disorder characterized by a disproportionate prolongation of reading time as a function of word length. Although the vast majority of cases reported in the literature show a right-sided visual defect, little is known about the contribution of this low-level visual impairment to their reading difficulties. The…

  19. A Pure Object-Oriented Embedding of Attribute Grammars

    NARCIS (Netherlands)

    Sloane, A.M.; Kats, L.C.L.; Visser, E.

    2009-01-01

    This paper is a pre-print of: Anthony M. Sloane, Lennart C. L. Kats, Eelco Visser. A Pure Object-Oriented Embedding of Attribute Grammars. In T. Ekman and J. Vinju, editors, Proceedings of the Ninth Workshop on Language Descriptions, Tools, and Applications (LDTA’09), Electronic Notes in Theoretical

  20. ONE CASE REPORT OF PURE SENSORY GUILLAIN-BARRE SYNDROME

    Institute of Scientific and Technical Information of China (English)

    杨咏梅; 夏中信; 魏岗之

    2004-01-01

    @@ The existence of purely sensory form of GuillianBarre syndrome is still subject to controversy. We report the case of patient who was admitted in our hospital in October, 1999 and had acute sensory neuropathy which, due to its clinicial, cerebrospinal fluid and electrophysiological characteristics, may be considered a sensory form of Guillain-Barre syndrome.