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Sample records for psychrobacter cryohalolentis k5

  1. Survivability of Psychrobacter cryohalolentis K5 Under Simulated Martian Surface Conditions

    Science.gov (United States)

    Smith, David J.; Schuerger, Andrew C.; Davidson, Mark M.; Pacala, Stephen W.; Bakermans, Corien; Onstott, Tullis C.

    2009-03-01

    Spacecraft launched to Mars can retain viable terrestrial microorganisms on board that may survive the interplanetary transit. Such biota might compromise the search for life beyond Earth if capable of propagating on Mars. The current study explored the survivability of Psychrobacter cryohalolentis K5, a psychrotolerant microorganism obtained from a Siberian permafrost cryopeg, under simulated martian surface conditions of high ultraviolet irradiation, high desiccation, low temperature, and low atmospheric pressure. First, a desiccation experiment compared the survival of P. cryohalolentis cells embedded, or not embedded, within a medium/salt matrix (MSM) maintained at 25°C for 24 h within a laminar flow hood. Results indicate that the presence of the MSM enhanced survival of the bacterial cells by 1 to 3 orders of magnitude. Second, tests were conducted in a Mars Simulation Chamber to determine the UV tolerance of the microorganism. No viable vegetative cells of P. cryohalolentis were detected after 8 h of exposure to Mars-normal conditions of 4.55 W/m2 UVC irradiation (200-280 nm), -12.5°C, 7.1 mbar, and a Mars gas mix composed of CO2 (95.3%), N2 (2.7%), Ar (1.6%), O2 (0.2%), and H2O (0.03%). Third, an experiment was conducted within the Mars chamber in which total atmospheric opacities were simulated at τ = 0.1 (dust-free CO2 atmosphere at 7.1 mbar), 0.5 (normal clear sky with 0.4 = dust opacity and 0.1 = CO2-only opacity), and 3.5 (global dust storm) to determine the survivability of P. cryohalolentis to partially shielded UVC radiation. The survivability of the bacterium increased with the level of UVC attenuation, though population levels still declined several orders of magnitude compared to UVC-absent controls over an 8 h exposure period.

  2. Characterization of a cold-active lipase from Psychrobacter cryohalolentis K5(T) and its deletion mutants.

    Science.gov (United States)

    Novototskaya-Vlasova, K A; Petrovskaya, L E; Rivkina, E M; Dolgikh, D A; Kirpichnikov, M P

    2013-04-01

    A gene coding for cold-active lipase from the psychrotrophic Gram-negative bacterium Psychrobacter cryohalolentis K5(T) isolated from a Siberian cryopeg has been cloned and expressed in Escherichia coli. The recombinant protein Lip1Pc with a 6× histidine tag at its C-terminus was purified by nickel affinity chromatography. With p-nitrophenyl dodecanoate (C12) as a substrate, the purified recombinant protein displayed maximum lipolytic activity at 25°C and pH 8.0. Increasing the temperature above 40°C and addition of various metal ions and organic solvents inhibited the enzymatic activity of Lip1Pc. Most nonionic detergents, such as Triton X-100 and Tween 20, slightly increased the lipase activity, while SDS completely inhibited it. To investigate the functional significance of the Lip1Pc N-terminal domain, we constructed five deletion mutants of this protein. The ND1 and ND2 mutants displayed specific activity reduced by 30-35%, while other truncated proteins were completely inactive. Both mutants demonstrated increased activity towards p-nitrophenyl decanoate (C10) and impaired utilization of C16 substrate. Although optimum reaction temperature of ND2 lowered to 20°C, it displayed enhanced stability by 44% after incubation at 40°C. The results prove that the N-terminal domain of Lip1Pc has a fundamental impact on the activity and stability of the protein.

  3. Expression and chaperone-assisted refolding of a new cold-active lipase from Psychrobacter cryohalolentis K5(T).

    Science.gov (United States)

    Novototskaya-Vlasova, Ksenia; Petrovskaya, Lada; Kryukova, Elena; Rivkina, Elizaveta; Dolgikh, Dmitry; Kirpichnikov, Mikhail

    2013-09-01

    We describe cloning and expression of genes coding for lipase Lip2Pc and lipase-specific foldase LifPc from a psychrotrophic microorganism Psychrobacter cryohalolentis K5(T) isolated from a Siberian cryopeg (the lense of overcooled brine within permafrost). Upon expression in Escherichiacoli Lip2Pc accumulated in inclusion bodies while chaperone was synthesized in a soluble form. An efficient protocol for solubilization and subsequent refolding of the recombinant lipase in the presence of the truncated chaperone was developed. Using this procedure Lip2Pc with specific activity of 6900U/mg was obtained. Contrary to published data on other lipase-chaperone complexes, refolded Lip2Pc was mostly recovered from the complex with chaperone by metal-affinity chromatography. Recombinant Lip2Pc displayed maximum lipolytic activity at 25°C and pH 8.0 with p-nitrophenyl palmitate (C16) as a substrate. Activity assays conducted at different temperatures revealed that the recombinant Lip2Pc is a cold-adapted lipase with ability to utilize substrates with long (C10-C16) hydrocarbon chains in the temperature range from +5 to +65°C. It demonstrated relatively high stability at temperatures above 60°C and in the presence of various metal ions or organic solvents (ethanol, methanol, etc.). Non-ionic detergents, such as Triton X-100 and Tween 20 decreased Lip2Pc activity and SDS completely inhibited it.

  4. Cell surface display of cold-active esterase EstPc with the use of a new autotransporter from Psychrobacter cryohalolentis K5(T).

    Science.gov (United States)

    Petrovskaya, L E; Novototskaya-Vlasova, K A; Kryukova, E A; Rivkina, E M; Dolgikh, D A; Kirpichnikov, M P

    2015-01-01

    We have cloned the gene coding for AT877-a new predicted member of the autotransporter protein family with an esterase passenger domain from permafrost bacterium Psychrobacter cryohalolentis K5(T). Expression of AT877 gene in Escherichia coli resulted in accumulation of the recombinant autotransporter in the outer membrane fraction and at the surface of the induced cells. AT877 displayed maximum hydrolytic activity toward medium-chain p-nitrophenyl esters (C8-C10) at 50 °C and was resistant to the presence of several metal ions, organic solvents and detergents. Previously, we have described a cold-active esterase EstPc from the same bacterium which possesses high activity at low temperatures and relatively high thermal stability. To construct a cell surface display system for EstPc, the hybrid autotransporter gene coding for EstPc with the α-helical linker and the translocator domain from AT877 was constructed and expressed in E. coli. According to the results of the cell fractionation studies and esterase activity measurements, the EstPc passenger was successfully displayed at the surface of the induced cells. It demonstrated a temperature optimum at 15-25 °C and a substrate preference toward p-nitrophenyl butyrate (C4). Obtained results provide a new example of the biotechnologically relevant enzyme from the permafrost microbial community with potential applications for the conversion of short- and medium-chain ester substrates and a basis for the construction of a new cell surface display platform.

  5. Endotoxin structures in the psychrophiles Psychromonas marina and Psychrobacter cryohalolentis contain distinctive acyl features.

    Science.gov (United States)

    Sweet, Charles R; Alpuche, Giancarlo M; Landis, Corinne A; Sandman, Benjamin C

    2014-07-09

    Lipid A is the essential component of endotoxin (Gram-negative lipopolysaccharide), a potent immunostimulatory compound. As the outer surface of the outer membrane, the details of lipid A structure are crucial not only to bacterial pathogenesis but also to membrane integrity. This work characterizes the structure of lipid A in two psychrophiles, Psychromonas marina and Psychrobacter cryohalolentis, and also two mesophiles to which they are related using MALDI-TOF MS and fatty acid methyl ester (FAME) GC-MS. P. marina lipid A is strikingly similar to that of Escherichia coli in organization and total acyl size, but incorporates an unusual doubly unsaturated tetradecadienoyl acyl residue. P. cryohalolentis also shows structural organization similar to a closely related mesophile, Acinetobacter baumannii, however it has generally shorter acyl constituents and shows many acyl variants differing by single methylene (-CH2-) units, a characteristic it shares with the one previously reported psychrotolerant lipid A structure. This work is the first detailed structural characterization of lipid A from an obligate psychrophile and the second from a psychrotolerant species. It reveals distinctive structural features of psychrophilic lipid A in comparison to that of related mesophiles which suggest constitutive adaptations to maintain outer membrane fluidity in cold environments.

  6. Endotoxin Structures in the Psychrophiles Psychromonas marina and Psychrobacter cryohalolentis Contain Distinctive Acyl Features

    Directory of Open Access Journals (Sweden)

    Charles R. Sweet

    2014-07-01

    Full Text Available Lipid A is the essential component of endotoxin (Gram-negative lipopolysaccharide, a potent immunostimulatory compound. As the outer surface of the outer membrane, the details of lipid A structure are crucial not only to bacterial pathogenesis but also to membrane integrity. This work characterizes the structure of lipid A in two psychrophiles, Psychromonas marina and Psychrobacter cryohalolentis, and also two mesophiles to which they are related using MALDI-TOF MS and fatty acid methyl ester (FAME GC-MS. P. marina lipid A is strikingly similar to that of Escherichia coli in organization and total acyl size, but incorporates an unusual doubly unsaturated tetradecadienoyl acyl residue. P. cryohalolentis also shows structural organization similar to a closely related mesophile, Acinetobacter baumannii, however it has generally shorter acyl constituents and shows many acyl variants differing by single methylene (-CH2- units, a characteristic it shares with the one previously reported psychrotolerant lipid A structure. This work is the first detailed structural characterization of lipid A from an obligate psychrophile and the second from a psychrotolerant species. It reveals distinctive structural features of psychrophilic lipid A in comparison to that of related mesophiles which suggest constitutive adaptations to maintain outer membrane fluidity in cold environments.

  7. Temperature-Dependence of Lipid A Acyl Structure in Psychrobacter cryohalolentis and Arctic Isolates of Colwellia hornerae and Colwellia piezophila

    Directory of Open Access Journals (Sweden)

    Charles R. Sweet

    2015-07-01

    Full Text Available Lipid A is a fundamental Gram-negative outer membrane component and the essential element of lipopolysaccharide (endotoxin, a potent immunostimulatory molecule. This work describes the metabolic adaptation of the lipid A acyl structure by Psychrobacter cryohalolentis at various temperatures in its facultative psychrophilic growth range, as characterized by MALDI-TOF MS and FAME GC-MS. It also presents the first elucidation of lipid A structure from the Colwellia genus, describing lipid A from strains of Colwellia hornerae and Colwellia piezophila, which were isolated as primary cultures from Arctic fast sea ice and identified by 16S rDNA sequencing. The Colwellia strains are obligate psychrophiles, with a growth range restricted to 15 °C or less. As such, these organisms have less need for fluidity adaptation in the acyl moiety of the outer membrane, and they do not display alterations in lipid A based on growth temperature. Both Psychrobacter and Colwellia make use of extensive single-methylene variation in the size of their lipid A molecules. Such single-carbon variations in acyl size were thought to be restricted to psychrotolerant (facultative species, but its presence in these Colwellia species shows that odd-chain acyl units and a single-carbon variation in lipid A structure are present in obligate psychrophiles, as well.

  8. Plasmid pP62BP1 isolated from an Arctic Psychrobacter sp. strain carries two highly homologous type II restriction-modification systems and a putative organic sulfate metabolism operon.

    Science.gov (United States)

    Lasek, Robert; Dziewit, Lukasz; Bartosik, Dariusz

    2012-05-01

    The complete nucleotide sequence of plasmid pP62BP1 (34,467 bp), isolated from Arctic Psychrobacter sp. DAB_AL62B, was determined and annotated. The conserved plasmid backbone is composed of several genetic modules, including a replication system (REP) with similarities to the REP region of the iteron-containing plasmid pPS10 of Pseudomonas syringae. The additional genetic load of pP62BP1 includes two highly related type II restriction-modification systems and a set of genes (slfRCHSL) encoding enzymes engaged in the metabolism of organic sulfates, plus a putative transcriptional regulator (SlfR) of the AraC family. The pP62BP1 slf locus has a compact and unique structure. It is predicted that the enzymes SlfC, SlfH, SlfS and SlfL carry out a chain of reactions leading to the transformation of alkyl sulfates into acyl-CoA, with dodecyl sulfate (SDS) as a possible starting substrate. Comparative analysis of the nucleotide sequences of pP62BP1 and other Psychrobacter spp. plasmids revealed their structural diversity. However, the presence of a few highly conserved DNA segments in pP62BP1, plasmid 1 of P. cryohalolentis K5 and pRWF-101 of Psychrobacter sp. PRwf-1 is indicative of recombinational shuffling of genetic information, and is evidence of lateral gene transfer in the Arctic environment.

  9. Characterization of Catalase from Psychrotolerant Psychrobacter piscatorii T-3 Exhibiting High Catalase Activity

    Directory of Open Access Journals (Sweden)

    Hidetoshi Matsuyma

    2012-02-01

    Full Text Available A psychrotolerant bacterium, strain T-3 (identified as Psychrobacter piscatorii, that exhibited an extraordinarily high catalase activity was isolated from the drain pool of a plant that uses H2O2 as a bleaching agent. Its cell extract exhibited a catalase activity (19,700 U·mg protein−1 that was higher than that of Micrococcus luteus used for industrial catalase production. Catalase was approximately 10% of the total proteins in the cell extract of the strain. The catalase (PktA was purified homogeneously by only two purification steps, anion exchange and hydrophobic chromatographies. The purified catalase exhibited higher catalytic efficiency and higher sensitivity of activity at high temperatures than M. luteus catalase. The deduced amino acid sequence showed the highest homology with catalase of Psycrobacter cryohalolentis, a psychrotolelant bacterium obtained from Siberian permafrost. These findings suggest that the characteristics of the PktA molecule reflected the taxonomic relationship of the isolate as well as the environmental conditions (low temperatures and high concentrations of H2O2 under which the bacterium survives. Strain T-3 efficiently produces a catalase (PktA at a higher rate than Exiguobacterium oxidotolerans, which produces a very strong activity of catalase (EktA at a moderate rate, in order to adapt to high concentration of H2O2.

  10. Genome sequence of Psychrobacter cibarius strain W1

    DEFF Research Database (Denmark)

    Raghupathi, Prem Krishnan; Herschend, Jakob; Røder, Henriette Lyng

    2016-01-01

    Here, we report the draft genome sequence of Psychrobacter cibarius strain W1, which was isolated at a slaughterhouse in Denmark. The 3.63-Mb genome sequence was assembled into 241 contigs.......Here, we report the draft genome sequence of Psychrobacter cibarius strain W1, which was isolated at a slaughterhouse in Denmark. The 3.63-Mb genome sequence was assembled into 241 contigs....

  11. Incidence, radioresistance, and behavior of Psychrobacter spp. in rabbit meat.

    Science.gov (United States)

    Rodríguez-Calleja, José M; Patterson, Margaret F; García-López, Isabel; Santos, Jesús A; Otero, Andrés; García-López, María-Luisa

    2005-03-01

    The relative incidence of Psychrobacter spp. in rabbit meat, the radioresistance of these bacteria, and the growth of nonirradiated and irradiated psychrobacter isolates, alone and in coculture, during chilled storage of inoculated sterile rabbit meat was investigated. Psychrobacter spp. accounted for 4.2% of the storage psychrotrophic flora of 30 rabbit carcasses. The radiation D10-values of 10 Psychrobacter isolates, irradiated at 4 degrees C in minced rabbit meat, ranged from 0.8 to 2.0 kGy, with significant (P meat, but when the fastest growing strain was cocultured with Pseudomonas fluorescens and Brochothrix thermosphacta isolates, maximum cell densities and growth rates were significantly (P meat, surviving cells of both Psychrobacter strains decreased for a period of 5 to 7 days and then resumed multiplication that, at day 12, resulted in a similar increase (1.6 to 1.7 log CFU/g) over initial survivor numbers. When irradiated in combination with the spoilage bacteria, one of the strains required 12 days to reach initial numbers. In conclusion, Psychrobacter spp. are radioresistant nonsporeforming bacteria with a low relative incidence among the storage flora of rabbit meat, unable to compete with food spoilage bacteria in this ecosystem and apparently not a major contributor to the spoilage of rabbit meat after irradiation.

  12. Phylogenetic relationship and phenotypic comparison of Psychrobacter species isolated from polar oceans

    Institute of Scientific and Technical Information of China (English)

    ZENG Yinxin; LI Huirong; YU Yong; CHEN Bo

    2007-01-01

    To investigate the phylogenetic relationship and biogeography of bacterioplankton in polar oceans, four Psychrobacter strains, BSw10170, BSw20352, BSw20370, and BSw20461, isolated from seawater of the Bering Sea, the Chukchi Sea, and the Prydz Bay, were characterized by 16S rDNA sequencing and physiological and biochemical testing. Results demonstrated that close relationships existed between the Arctic and Antarctic strains with sequence similarities higher than 97%. These four Psychrobacter strains not only showed almost identical phenotypic characteristics among them, but also shared a lot of similarities with those related Psychrobacter species, indicating that psychrotolerance and halotolerance of Psychrobacter strains may be among the reasons for their bipolar, even global distribution in marine environments at the genus level.

  13. Fatal Psychrobacter sp. infection in a pediatric patient with meningitis identified by metagenomic next-generation sequencing in cerebrospinal fluid.

    Science.gov (United States)

    Ortiz-Alcántara, Joanna María; Segura-Candelas, José Miguel; Garcés-Ayala, Fabiola; Gonzalez-Durán, Elizabeth; Rodríguez-Castillo, Araceli; Alcántara-Pérez, Patricia; Wong-Arámbula, Claudia; González-Villa, Maribel; León-Ávila, Gloria; García-Chéquer, Adda Jeanette; Diaz-Quiñonez, José Alberto; Méndez-Tenorio, Alfonso; Ramírez-González, José Ernesto

    2016-03-01

    The genus Psychrobacter contains environmental, psychrophilic and halotolerant gram-negative bacteria considered rare opportunistic pathogens in humans. Metagenomics was performed on the cerebrospinal fluid (CSF) of a pediatric patient with meningitis. Nucleic acids were extracted, randomly amplified, and sequenced with the 454 GS FLX Titanium next-generation sequencing (NGS) system. Sequencing reads were assembled, and potential virulence genes were predicted. Phylogenomic and phylogenetic studies were performed. Psychrobacter sp. 310 was identified, and several virulence genes characteristic of pathogenic bacteria were found. The phylogenomic study and 16S rRNA gene phylogenetic analysis showed that the closest relative of Psychrobacter sp. 310 was Psychrobacter sanguinis. To our knowledge, this is the first report of a meningitis case associated with Psychrobacter sp. identified by NGS metagenomics in CSF from a pediatric patient. The metagenomic strategy based on NGS was a powerful tool to identify a rare unknown pathogen in a clinical case.

  14. Optimizing Your K-5 Engineering Design Challenge

    Science.gov (United States)

    Coppola, Matthew Perkins; Merz, Alice H.

    2017-01-01

    Today, elementary school teachers continue to revisit old lessons and seek out new ones, especially in engineering. Optimization is the process by which an existing product or procedure is revised and refined. Drawn from the authors' experiences working directly with students in grades K-5 and their teachers and preservice teachers, the…

  15. Optimizing Your K-5 Engineering Design Challenge

    Science.gov (United States)

    Coppola, Matthew Perkins; Merz, Alice H.

    2017-01-01

    Today, elementary school teachers continue to revisit old lessons and seek out new ones, especially in engineering. Optimization is the process by which an existing product or procedure is revised and refined. Drawn from the authors' experiences working directly with students in grades K-5 and their teachers and preservice teachers, the…

  16. Debaryomyces hansenii, Proteus vulgaris, Psychrobacter sp and Microbacterium foliorum are able to produce biogenic amines

    OpenAIRE

    Hélinck, Sandra; Perello, Marie-Claire; Deetae, Pawinee; de Revel, Gilles; Spinnler, Henry-Eric

    2013-01-01

    The occurrence of biogenic amines (BAs) produced by the microbiota of fermented foods is a source of health concern. The three bacteria Microbacterium foliorum, Proteus vulgaris and Psychrobacter sp. and the yeast Debaryomyces hansenii, isolated from surface-ripened cheeses, are known to contribute to their aromatic properties. The potential of each of these strains to produce BAs was investigated, both in pure cultures of each bacterium in a laboratory medium supplemented with amino acids an...

  17. Characterization of Catalase from Psychrotolerant Psychrobacter piscatorii T-3 Exhibiting High Catalase Activity

    OpenAIRE

    Hidetoshi Matsuyma; Isao Yumoto; Hideyuki Kimoto; Kazuaki Yoshimune

    2012-01-01

    A psychrotolerant bacterium, strain T-3 (identified as Psychrobacter piscatorii), that exhibited an extraordinarily high catalase activity was isolated from the drain pool of a plant that uses H2O2 as a bleaching agent. Its cell extract exhibited a catalase activity (19,700 U·mg protein−1) that was higher than that of Micrococcus luteus used for industrial catalase production. Catalase was approximately 10% of the total proteins in the cell extract of the strain. The catalase (PktA) was purif...

  18. Activation of macrophages by an exopolysaccharide isolated from Antarctic Psychrobacter sp. B-3

    Science.gov (United States)

    Yu, Leiye; Sun, Guojie; Wei, Jingfang; Wang, Yingze; Du, Chao; Li, Jiang

    2016-09-01

    An exopolysaccharide (EPS) was isolated and purified from an Antarctic psychrophilic bacterium B-3, identified as Psychrobacter sp., and the activation of RAW264.7 cells by B-3 EPS was investigated. The results show that B-3 EPS, over a certain concentration range, promoted cell viability, nitric oxide production, tumor necrosis factor (TNF)α secretion, and phagocytic ability. Furthermore, TAK-242, an inhibitor of the toll-like receptor 4 (TLR4) significantly reduced nitric oxide production by these cells after stimulation with B-3 EPS. Moreover, B-3 EPS induced p65 phosphorylation and IκBα degradation in these cells. In conclusion, B-3 EPS might have activated RAW264.7 cells by combining with TLR4 on cell surface and triggering activation of NF-κB signaling pathways, implying that this EPS could activate macrophages and regulate initial immune response.

  19. Conversion of isoeugenol to vanillin by Psychrobacter sp. strain CSW4.

    Science.gov (United States)

    Ashengroph, Morahem; Nahvi, Iraj; Zarkesh-Esfahani, Hamid; Momenbeik, Fariborz

    2012-01-01

    To screen strains of halotolerant or halophile bacteria which are able to convert isoeugenol to vanillin, 36 different strains of bacteria isolated from the salty environments in Iran were investigated. During growth on isoeugenol, a moderately halotolerant Gram-negative coccobacil showed capability of converting isoeugenol to vanillin. Based on morphological, physiological, and phylogenetic studies, strain CSW4 was classified as a bacterium belonging to the genus Psychrobacter. The bioconversion products were confirmed by thin-layer chromatography, high-performance liquid chromatography, and spectral data obtained from UV/Vis spectroscopy, FTIR, and mass-spectroscopy. Using growing cells, vanillin reached its maximum level of 88.18 mg L(-1) after 24 h of reaction time in the presence of 1 g L(-1) isoeugenol, resulting in a molar yield of 10.2%. The use of resting cells led to the optimal yield of vanillin (16.4%) which was obtained after 18-h reaction using 1 g L(-1) isoeugenol and 3.1 g of dry weight of cells per liter harvested at the end of the exponential growth phase. To improve vanillin yield, the effect of substrate concentration on vanillin production under resting cells conditions was also investigated. Using 10 g L(-1) isoeugenol, the maximal vanillin concentration (1.28 g L(-1)) was achieved after a 48-h reaction, without further optimization. The present study brings the first evidence for biotransformation of isoeugenol to vanillin in the genus Psychrobacter.

  20. Dicty_cDB: Contig-U15060-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available :none) Synechococcus sp. CC9605, comple... 90 4e-16 CP000614_1394( CP000614 |pid:none) Burkholderia vietnam...:none) Psychrobacter cryohalolentis K5,... 94 2e-17 CP000614_679( CP000614 |pid:none) Burkholderia vietnamie...35 7 ( AY700145 ) Polysphondylium pallidum mitochondrion DNA, compl... 113 5e-33 5 ( AF211142 ) Carsonella ruddii na...tural-host Pachypsylla pallid... 56 5e-19 7 ( AF211141 ) Carsonella ruddii natural-host Pachypsylla celtid...... 56 2e-18 8 ( AF211150 ) Carsonella ruddii natural-host Tainarys sordida 2... 56 5e-18 7 ( EF016626

  1. Dicty_cDB: Contig-U06963-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available none) Psychrobacter cryohalolentis K5... 43 0.011 CP000614_224( CP000614 |pid:none) Burkholderia vietnamiens...:none) Shewanella frigidimarina NCIMB ... 41 0.057 AY658586_1( AY658586 |pid:none) Synthetic construct Peudomona...***ik**lk* Translated Amino Acid sequence (All Frames) Frame A: kk*kmkgeliditmksglkcdayvsrpkdsqkel...:none) Streptomyces coelicolor A3(2) com... 77 9e-21 CP000384_2097( CP000384 |pid:none) Myco...bacterium abscessus chromos... 80 1e-18 AL939131_108( AL939131 |pid:none) Streptomyces coelico

  2. Gifted Education and National Standards: A K-5 Program Evaluation

    Science.gov (United States)

    Harwell-Braun, Debra A.

    2010-01-01

    The purpose of this study was to conduct a program evaluation of a K-5 Gifted Education Program. Program evaluation addressed how well the gifted education program studied met the National Association of Gifted Children standards. In addition, this study included stakeholder perceptions of the current gifted education program K-5. This program…

  3. On the Crossing Numbers of K5×Sn%K5×Sn的交叉数

    Institute of Scientific and Technical Information of China (English)

    吕胜祥; 黄元秋

    2008-01-01

    By connecting the 5 vertices of K5 to other n vertices, we obtain a special family of graph denoted by Hn. This paper proves that the crossing number of Hn is Z(5, n) +2n+[n/2] 1, and the crossing number of Cartesian products of K5 with star Sn is Z(5, n) + 5n + [n/2]+1.

  4. Molecular structure and translocation of a multiple antibiotic resistance region of a Psychrobacter psychrophilus permafrost strain.

    Science.gov (United States)

    Petrova, Mayya; Gorlenko, Zhosephine; Mindlin, Sofia

    2009-06-01

    A Psychrobacter psychrophilus strain resistant to tetracycline and streptomycin was isolated from a 15,000-35,000-year-old permafrost subsoil sediment sampled from the coast of the Eastern-Siberian Sea. The genes conferring antibiotic resistance were localized on an c. 30-kb pKLH80 plasmid. It was shown that the antibiotic resistance region of this plasmid has a mosaic structure and contains closely linked streptomycin resistance (strA-strB) and tetracycline resistance [tetR-tet(H)] genes, followed by a novel IS element (ISPpy1) belonging to the IS3 family. Both the strA-strB and tetR-tet(H) genes of pKLH80 were highly similar to those found in modern clinical bacterial isolates. It was shown that the ISPpy1 element of pKLH80 can direct translocation of the adjacent antibiotic resistance genes to different target plasmids, either by one-ended transposition or by formation of a composite transposon resulting from the insertion of the ISPpy1 second copy at the other side of the antibiotic resistance region. Thus, our data demonstrate that clinically important antibiotic resistance genes originated long before the introduction of antibiotics into clinical practice and confirm an important role of horizontal gene transfer in the distribution of these genes in natural bacterial populations.

  5. Biotreatment of chlorpyrifos in a bench scale bioreactor using Psychrobacter alimentarius T14.

    Science.gov (United States)

    Khalid, Saira; Hashmi, Imran

    2016-01-01

    Bacteria tolerant to high pesticide concentration could be used for designing an efficient treatment technology. Bacterial strains T14 was isolated from pesticide-contaminated soil in mineral salt medium (MSM) and identified as Psychrobacter alimentarius T14 using 16S rRNA gene sequence analysis. Bench scale bioreactor was evaluated for biotreatment of high Chlorpyrifos (CP) concentration using P. alimentarius T14. Effect of various parameters on bioreactor performance was examined and optimum removal was observed at optical density (OD600 nm): 0.8; pH: 7.2; CP concentration: 300 mg L(-1) and hydraulic retention time: 48 h. At optimum conditions, 70.3/79% of CP/chemical oxygen demand (COD) removal was achieved in batch bioreactors. In addition, P. alimentarius T14 achieved 95/91, 62.3/75, 69.8/64% CP/COD removal efficiency with addition of CS (co-substrates), CS1 (yeast extract + synthetic wastewater), CS2 (glucose + synthetic wastewater) and CS3 (yeast extract), respectively. Addition of CS1 to bioreactor could accelerate CP removal rate up to many cycles with considerable efficiency. However, accumulation of 3, 5, 6-trichloro-2-pyridinol affects reactor performance in cyclic mode. First-order rate constant k1 0.062 h(-1) and t1/2 11.1 h demonstrates fast degradation. Change in concentration of total chlorine and nitrogen could be the result of complete mineralization. Photodegradation of CP in commercial product was more than its pure form. Commercial formulation accelerated photodegradation process; however no effect on biodegradation process was observed. After bio-photodegradation, negligible toxicity for seeds of Triticum aestivum was observed. Study suggests an efficient treatment of wastewater containing CP and its metabolites in batch bioreactors could be achieved using P. alimentarius.

  6. Juneau Indian Studies Elementary Curriculum Guide. Grades K-5.

    Science.gov (United States)

    Cadiente, Ronalda

    Designed to provide instruction in Tlingit culture as an integral part of the K-5 social studies curriculum, this guide presents teachers with extensive lesson plans and numerous resource materials. The units of study focus on the culture and environment of southeast Alaska and emphasize experiential learning activities. Each grade…

  7. Math and Economics: Implementing Authentic Instruction in Grades K-5

    Science.gov (United States)

    Althauser, Krista; Harter, Cynthia

    2016-01-01

    The purpose of this study is to outline a partnership program that involved a local elementary school district, an institution of higher education, the local business community, and a state economic education advocacy group to integrate economics into math in grades K-5. The "Economics: Math in Real Life" program was provided in…

  8. The Common Core: Insights into the K-5 Standards

    Science.gov (United States)

    McLaughlin, Maureen; Overturf, Brenda J.

    2012-01-01

    The role of the Common Core English Language Arts Standards in grades K-5 literacy instruction is the focus of the article. The authors begin by raising four questions: (1) What is the essential philosophy of the Common Core State Standards?; (2) What do educators need to know to use the College and Career Readiness Standards and Common Core State…

  9. Draft genome sequence of Psychrobacter sp. ENNN9_III, a strain isolated from water in a polluted temperate estuarine system (Ria de Aveiro, Portugal

    Directory of Open Access Journals (Sweden)

    Jaqueline Conceição Meireles Gomes

    2016-06-01

    Twenty-five sequences related to the degradation of aromatic compounds were predicted, as well as numerous genes related to resistance to metals or metal(loids. The genome sequence of Psychrobacter strain ENNN9_III provides the groundwork for further elucidation of the mechanisms of metal resistance and aromatic compounds degradation. Future studies are needed to confirm the usefulness of this strain for bioremediation proposes.

  10. Growth and aroma contribution of Microbacterium foliorum, Proteus vulgaris and Psychrobacter sp. during ripening in a cheese model medium.

    Science.gov (United States)

    Deetae, Pawinee; Spinnler, Henry-Eric; Bonnarme, Pascal; Helinck, Sandra

    2009-02-01

    The growth and aroma contribution of Microbacterium foliorum, Proteus vulgaris and Psychrobacter sp., some common but rarely mentioned cheese bacteria, were investigated in a cheese model deacidified by Debaryomyces hansenii during the ripening process. Our results show that these bacteria had distinct growth and cheese flavour production patterns during the ripening process. P. vulgaris had the greatest capacity to produce not only the widest variety but also the highest quantities of volatile compounds with low olfactive thresholds, e.g. volatile sulphur compounds and branched-chain alcohols. Such compounds produced by P. vulgaris increased after 21 days of ripening and reached a maximum at 41 days. The three bacteria studied exhibited various degrees of caseinolytic, aminopeptidase and deaminase activities. Moreover, P. vulgaris had a greater capacity for hydrolysing casein and higher deaminase activity. Our results show that P. vulgaris, a Gram-negative bacterium naturally present on the surface of ripened cheeses, could produce high concentrations of flavour compounds from amino acid degradation during the ripening process. Its flavouring role in cheese cannot be neglected. Moreover, it could be a useful organism for producing natural flavours as dairy ingredients.

  11. Structural Investigation of the Oligosaccharide Portion Isolated from the Lipooligosaccharide of the Permafrost Psychrophile Psychrobacter arcticus 273-4

    Science.gov (United States)

    Casillo, Angela; Parrilli, Ermenegilda; Filomena, Sannino; Lindner, Buko; Lanzetta, Rosa; Parrilli, Michelangelo; Tutino, Maria Luisa; Corsaro, Maria Michela

    2015-01-01

    Psychrophilic microorganisms have successfully colonized all permanently cold environments from the deep sea to mountain and polar regions. The ability of an organism to survive and grow in cryoenviroments depends on a number of adaptive strategies aimed at maintaining vital cellular functions at subzero temperatures, which include the structural modifications of the membrane. To understand the role of the membrane in the adaptation, it is necessary to characterize the cell-wall components, such as the lipopolysaccharides, that represent the major constituent of the outer membrane. The aim of this study was to investigate the structure of the carbohydrate backbone of the lipooligosaccharide (LOS) isolated from the cold-adapted Psychrobacter arcticus 273-4. The strain, isolated from a 20,000-to-30,000-year-old continuously frozen permafrost in Siberia, was cultivated at 4 °C. The LOS was isolated from dry cells and analyzed by means of chemical methods. In particular, it was degraded either by mild acid hydrolysis or by hydrazinolysis and investigated in detail by 1H and 13C NMR spectroscopy and by ESI FT-ICR mass spectrometry. The oligosaccharide was characterized by the substitution of the heptose residue, usually linked to Kdo in the inner core, with a glucose, and for the unusual presence of N-acetylmuramic acid. PMID:26204948

  12. 26 CFR 1.401(k)-5 - Special rules for mergers, acquisitions and similar events. [Reserved

    Science.gov (United States)

    2010-04-01

    ... 26 Internal Revenue 5 2010-04-01 2010-04-01 false Special rules for mergers, acquisitions and similar events. 1.401(k)-5 Section 1.401(k)-5 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE.... § 1.401(k)-5 Special rules for mergers, acquisitions and similar events....

  13. Exploration of Csp genes from temperate and glacier soils of the Indian Himalayas and in silico analysis of encoding proteins.

    Science.gov (United States)

    Latha, Prema K; Soni, Ravindra; Khan, Mahejibin; Marla, Soma S; Goel, Reeta

    2009-04-01

    The metagenomic Csp library was constructed from the temperate and glacier soils of central Himalaya, India followed by polymerase chain reaction (PCR) amplification. The library was further screened for low-temperature adaptation, and the positive recombinants were sorted out by determining changes in the melting temperature (Tm). A homology search of cloned sequence showed their identity with the Csp genes of Pseudomonas fluorescens, Psychrobacter cryohalolentis K5, and Shewanella spp MR-4. Amino acid sequence analysis annotated the presence of conserved aromatic and basic amino acids as well as RNA binding motifs from the cold shock domain. Furthermore, a PROSITE scan showed a moderate identity of less than 60% with the known cold shock-inducible proteins (ribosomal proteins, rbfA, DEAD-box helicases), cold acclimation protein, and temperature-induced protein (SRP1/TIP1). This study highlighted the prevalence of Csp genes from cold Himalayan environments that can be explored for tailor-made crop constructions in future.

  14. A pharmacological profile of the high-affinity GluK5 kainate receptor.

    Science.gov (United States)

    Møllerud, Stine; Kastrup, Jette Sandholm; Pickering, Darryl S

    2016-10-05

    Mouse GluK5 was expressed in Sf9 insect cells and radiolabelled with [(3)H]-kainate in receptor binding assays (Kd=6.9nM). Western immunoblotting indicated an Sf9 GluK5 band doublet corresponding to the glycosylated (128kDa) and deglycosylated (111kDa) protein, which was identical to the band pattern of native rat brain GluK5. A pharmacological profile of the high-affinity kainate receptor GluK5 is described which is distinct from the profiles of other kainate receptors (GluK1-3). The 27 tested ligands generally show a preferential affinity to GluK1 over GluK5, the exceptions being: dihydrokainate, (S)-5-fluorowillardiine, (S)-glutamate and quisqualate, where the affinity is similar at GluK1 and GluK5. In contrast, quisqualate shows 40-fold higher affinity at GluK5 over GluK3 whereas (S)-1-(2'-amino-2'-caboxyethyl)thienol[3,4-d]pyrimidin-2,4-dione (NF1231), (RS)-2-amino-3-(5-tert-butyl-3-hydroxyisoxazol-4-yl)propionate (ATPA), dihydrokainate and (2S,4R)-4-methyl-glutamate (SYM2081) have higher affinity at GluK3 compared to GluK5. Since some studies have indicated that GluK5 is associated with various diseases in the central nervous system (e.g. schizophrenia, temporal lobe epilepsy, bipolar disorder), selective GluK5 ligands could have therapeutic potential. The distinct pharmacological profile of GluK5 suggests that it would be possible to design ligands with selectivity towards GluK5.

  15. A pharmacological profile of the high-affinity GluK5 kainate receptor

    DEFF Research Database (Denmark)

    Møllerud, Stine; Kastrup, Jette Sandholm Jensen; Pickering, Darryl S

    2016-01-01

    Mouse GluK5 was expressed in Sf9 insect cells and radiolabelled with [3H]-kainate in receptor binding assays (Kd = 6.9 nM). Western immunoblotting indicated an Sf9 GluK5 band doublet corresponding to the glycosylated (128 kDa) and deglycosylated (111 kDa) protein, which was identical to the band...

  16. Interaction of Escherichia coli K1 and K5 with Acanthamoeba castellanii trophozoites and cysts.

    Science.gov (United States)

    Matin, Abdul; Jung, Suk-Yul

    2011-12-01

    The existence of symbiotic relationships between Acanthamoeba and a variety of bacteria is well-documented. However, the ability of Acanthamoeba interacting with host bacterial pathogens has gained particular attention. Here, to understand the interactions of Escherichia coli K1 and E. coli K5 strains with Acanthamoeba castellanii trophozoites and cysts, association assay, invasion assay, survival assay, and the measurement of bacterial numbers from cysts were performed, and nonpathogenic E. coli K12 was also applied. The association ratio of E. coli K1 with A. castellanii was 4.3 cfu per amoeba for 1 hr but E. coli K5 with A. castellanii was 1 cfu per amoeba for 1 hr. By invasion and survival assays, E. coli K5 was recovered less than E. coli K1 but still alive inside A. castellanii. E. coli K1 and K5 survived and multiplied intracellularly in A. castellanii. The survival assay was performed under a favourable condition for 22 hr and 43 hr with the encystment of A. castellanii. Under the favourable condition for the transformation of trophozoites into cysts, E. coli K5 multiplied significantly. Moreover, the pathogenic potential of E. coli K1 from A. castellanii cysts exhibited no changes as compared with E. coli K1 from A. castellanii trophozoites. E. coli K5 was multiplied in A. castellanii trophozoites and survived in A. castellanii cysts. Therefore, this study suggests that E. coli K5 can use A. castellanii as a reservoir host or a vector for the bacterial transmission.

  17. Assembly Stoichiometry of the GluK2/GluK5 Kainate Receptor Complex

    Directory of Open Access Journals (Sweden)

    Andreas Reiner

    2012-03-01

    Full Text Available Ionotropic glutamate receptors assemble as homo- or heterotetramers. One well-studied heteromeric complex is formed by the kainate receptor subunits GluK2 and GluK5. Retention motifs prevent trafficking of GluK5 homomers to the plasma membrane, but coassembly with GluK2 yields functional heteromeric receptors. Additional control over GluK2/GluK5 assembly seems to be exerted by the amino-terminal domains, which preferentially assemble into heterodimers as isolated domains. However, the stoichiometry of the full-length GluK2/GluK5 receptor complex has yet to be determined, as is the case for all non-NMDA glutamate receptors. Here, we address this question, using a single-molecule imaging technique that enables direct counting of the number of each GluK subunit type in homomeric and heteromeric receptors in the plasma membranes of live cells. We show that GluK2 and GluK5 assemble with 2:2 stoichiometry. This is an important step toward understanding the assembly mechanism, architecture, and functional consequences of heteromer formation in ionotropic glutamate receptors.

  18. Multifrequency Study of Giant Radio Pulses from the Crab Pulsar with K5 VLBI Recording Terminal

    CERN Document Server

    Popov, M V; Kondratiev, V I; Bilous, A V; Moshkina, O; Oreshko, V V; Ilyasov, Yu P; Sekido, M; Kondo, T

    2009-01-01

    Simultaneous multifrequency observations of the Crab pulsar giant pulses (GPs) were performed with the 64-m Kalyazin radio telescope at four frequencies 0.6, 1.4, 2.2 and 8.3 GHz using the K5 VLBI recording terminal. K5 terminal provided continuous recording in 16 4-MHz wide frequency channels distributed over 4 frequency bands. Several thousands of GPs were detected during about 6 hours of observations in two successive days in July 2005. Radio spectra of single GPs were analysed at separate frequencies and over whole frequency range. These spectra manifest notable modulation both on large ($\\Delta\

  19. Mobile Devices and the Teacher Perceived Barriers Impacting Effective Integration in the K-5 Classroom

    Science.gov (United States)

    Nixon, Tina S.

    2013-01-01

    This qualitative, phenomenological study explored the teacher perceived barriers of using mobile devices in the K-5 classroom. Research confirms teachers face various types of variables and become reluctant to use technology within their curriculum driven lessons. This study sought to understand what teachers perceive as barriers, and how the…

  20. K-5 Student Experiences in a Dance Residency: A Case Study

    Science.gov (United States)

    Leonard, Alison E.; McShane-Hellenbrand, Karen

    2012-01-01

    In this article, the collaborating authors, a researcher and dance artist, confront assumptions surrounding dance's experiential nature and assessment in schools. Presenting findings from a qualitative case study assessment of a three-week, whole-school dance artist-in-residence at a diverse and inclusive metropolitan K-5 school, the authors focus…

  1. Democratic Bodies: Exemplary Practice and Democratic Education in a K-5 Dance Residency

    Science.gov (United States)

    Leonard, Alison E.

    2014-01-01

    This research highlights a K-5 dance artist-in-residence as a form of democratic and exemplary dance education that ignited collaboration, promoted equity, fostered student autonomy, and demonstrated rigor in school curriculum. Through examining observation, interview, and performance-based data and calling upon critical, democratic education…

  2. Democratic Bodies: Exemplary Practice and Democratic Education in a K-5 Dance Residency

    Science.gov (United States)

    Leonard, Alison E.

    2014-01-01

    This research highlights a K-5 dance artist-in-residence as a form of democratic and exemplary dance education that ignited collaboration, promoted equity, fostered student autonomy, and demonstrated rigor in school curriculum. Through examining observation, interview, and performance-based data and calling upon critical, democratic education…

  3. Identification of regulatory sequences and expression analysis of OmpR gene under different stress conditions in the antarctic bacterium Psychrobacter sp. G.

    Science.gov (United States)

    Song, Weizhi; Lin, Xuezheng; Che, Shuai

    2013-03-01

    An OmpR gene, named OmpR503, was cloned from the Antarctic psychrotrophic bacterium Psychrobacter sp. G according to its genomic draft. The deduced amino acid sequences of OmpR503 were highly conserved with other known protein members of OmpR family. qRT-PCR analysis showed that the expression of OmpR503 gene was significantly enhanced by high salinity (90, 120). The expression of OmpR503 gene was also significantly increased at low temperature (0, 10 °C), whereas depressed at high temperature (30 °C). When the strain was subjected to combined stress (0 °C with a salinity of 90), the expression of OmpR503 gene was increased significantly, which was up to 3.0-fold. In Antarctica, freezing tolerance of psychrotrophic bacteria is often accompanied by tolerance to osmotic stress caused by a lack of free water, thus the cold inducibility of OmpR503 gene might help the strain adapt to the harsh environment more efficiently.

  4. The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature Growth

    Energy Technology Data Exchange (ETDEWEB)

    Ayala-del-Rio, Hector L. [Michigan State University, East Lansing; Chain, Patrick S. G. [Lawrence Livermore National Laboratory (LLNL); Grzymski, Joseph J. [Desert Research Institute, Reno, NV; Ponder, Monica [Michigan State University, East Lansing; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Bergholz, Peter [Michigan State University, East Lansing; Bartolo, Genevive [U.S. Department of Energy, Joint Genome Institute; Hauser, Loren John [ORNL; Land, Miriam L [ORNL; Bakermans, Corien [Michigan State University, East Lansing; Rodrigues, Debora [Michigan State University, East Lansing; Klappenbach, Joel [Michigan State University, East Lansing; Zarka, Dan [Michigan State University, East Lansing; Larimer, Frank W [ORNL; Richardson, P M [U.S. Department of Energy, Joint Genome Institute; Murray, Alison [Desert Research Institute, Reno, NV; Thomashow, Michael [Michigan State University, East Lansing; Tiedje, James M. [Michigan State University, East Lansing

    2010-01-01

    Psychrobacter arcticus strain 273-4, which grows at temperatures as low as -10 degrees C, is the first cold-adapted bacterium from a terrestrial environment whose genome was sequenced. Analysis of the 2.65-Mb genome suggested that some of the strategies employed by P. arcticus 273-4 for survival under cold and stress conditions are changes in membrane composition, synthesis of cold shock proteins, and the use of acetate as an energy source. Comparative genome analysis indicated that in a significant portion of the P. arcticus proteome there is reduced use of the acidic amino acids and proline and arginine, which is consistent with increased protein flexibility at low temperatures. Differential amino acid usage occurred in all gene categories, but it was more common in gene categories essential for cell growth and reproduction, suggesting that P. arcticus evolved to grow at low temperatures. Amino acid adaptations and the gene content likely evolved in response to the long-term freezing temperatures (-10 degrees C to -12 degrees C) of the Kolyma (Siberia) permafrost soil from which this strain was isolated. Intracellular water likely does not freeze at these in situ temperatures, which allows P. arcticus to live at subzero temperatures.

  5. Common Core Literacy Lesson Plans: Ready-to-Use Resources, K-5

    Science.gov (United States)

    Davis, Lauren

    2013-01-01

    Schools nationwide are transitioning to the Common Core--our advice to you: Don't go it alone! Our new book, "Common Core Literacy Lesson Plans: Ready-to-Use Resources, K-5," shows you that teaching the Common Core State Standards in the elementary grades doesn't have to be intimidating! This easy-to-use guide provides model lesson plans for…

  6. Interaction of Escherichia coli K1 and K5 with Acanthamoeba castellanii Trophozoites and Cysts

    OpenAIRE

    Matin, Abdul; Jung, Suk-Yul

    2011-01-01

    The existence of symbiotic relationships between Acanthamoeba and a variety of bacteria is well-documented. However, the ability of Acanthamoeba interacting with host bacterial pathogens has gained particular attention. Here, to understand the interactions of Escherichia coli K1 and E. coli K5 strains with Acanthamoeba castellanii trophozoites and cysts, association assay, invasion assay, survival assay, and the measurement of bacterial numbers from cysts were performed, and nonpathogenic E. ...

  7. Pentapotassium praseodymium(III dilithium decafluoride, K5PrLi2F10

    Directory of Open Access Journals (Sweden)

    Anna Gagor

    2009-11-01

    Full Text Available The crystal structure of K5PrLi2F10 is isotypic with those of other K5RELi2F10 compounds (RE = Eu, Nd. The lanthanoid ions are isolated in K5PrLi2F10, with a mean separation between the Pr ions of 7.356 Å. It classifies this crystal as a so-called self-activated material containing lanthanoid ions within the matrix. Except for two K+ and two F− ions, all atoms are located on sites with m symmetry. In the structure, distorted PrF8 dodecahedra and two different LiF4 tetrahedra share F atoms, forming sheets parallel to (100. The isolated PrF8 dodecahedra exhibit a mean Pr—F distance of 2.406 Å. The K+ cations are located within and between these sheets, leading to highly irregular KFx polyhedra with coordination numbers of eight and nine for the alkali metal cations.

  8. Application of Taguchi Design and Response Surface Methodology for Improving Conversion of Isoeugenol into Vanillin by Resting Cells of Psychrobacter sp. CSW4.

    Science.gov (United States)

    Ashengroph, Morahem; Nahvi, Iraj; Amini, Jahanshir

    2013-01-01

    For all industrial processes, modelling, optimisation and control are the keys to enhance productivity and ensure product quality. In the current study, the optimization of process parameters for improving the conversion of isoeugenol to vanillin by Psychrobacter sp. CSW4 was investigated by means of Taguchi approach and Box-Behnken statistical design under resting cell conditions. Taguchi design was employed for screening the significant variables in the bioconversion medium. Sequentially, Box-Behnken design experiments under Response Surface Methodology (RSM) was used for further optimization. Four factors (isoeugenol, NaCl, biomass and tween 80 initial concentrations), which have significant effects on vanillin yield, were selected from ten variables by Taguchi experimental design. With the regression coefficient analysis in the Box-Behnken design, a relationship between vanillin production and four significant variables was obtained, and the optimum levels of the four variables were as follows: initial isoeugenol concentration 6.5 g/L, initial tween 80 concentration 0.89 g/L, initial NaCl concentration 113.2 g/L and initial biomass concentration 6.27 g/L. Under these optimized conditions, the maximum predicted concentration of vanillin was 2.25 g/L. These optimized values of the factors were validated in a triplicate shaking flask study and an average of 2.19 g/L for vanillin, which corresponded to a molar yield 36.3%, after a 24 h bioconversion was obtained. The present work is the first one reporting the application of Taguchi design and Response surface methodology for optimizing bioconversion of isoeugenol into vanillin under resting cell conditions.

  9. Targeted deletion of Atg5 reveals differential roles of autophagy in keratin K5-expressing epithelia

    Energy Technology Data Exchange (ETDEWEB)

    Sukseree, Supawadee [Research Division of Biology and Pathobiology of the Skin, Department of Dermatology, Medical University of Vienna, Vienna (Austria); Department of Biochemistry, Faculty of Medicine, Srinakharinwirot University, Bangkok (Thailand); Rossiter, Heidemarie; Mildner, Michael [Research Division of Biology and Pathobiology of the Skin, Department of Dermatology, Medical University of Vienna, Vienna (Austria); Pammer, Johannes [Institute of Clinical Pathology, Medical University of Vienna, Vienna (Austria); Buchberger, Maria; Gruber, Florian [Research Division of Biology and Pathobiology of the Skin, Department of Dermatology, Medical University of Vienna, Vienna (Austria); Watanapokasin, Ramida [Department of Biochemistry, Faculty of Medicine, Srinakharinwirot University, Bangkok (Thailand); Tschachler, Erwin [Research Division of Biology and Pathobiology of the Skin, Department of Dermatology, Medical University of Vienna, Vienna (Austria); Eckhart, Leopold, E-mail: leopold.eckhart@meduniwien.ac.at [Research Division of Biology and Pathobiology of the Skin, Department of Dermatology, Medical University of Vienna, Vienna (Austria)

    2013-01-11

    Highlights: Black-Right-Pointing-Pointer We generated mice lacking Atg5 and autophagy in keratin K5-positive epithelia. Black-Right-Pointing-Pointer Suppression of autophagy in thymic epithelium was not associated with signs of autoimmunity. Black-Right-Pointing-Pointer Autophagy was required for normal terminal differentiation of preputial gland cells. Black-Right-Pointing-Pointer Autophagy-deficient cells of the preputial glands degraded nuclear DNA prematurely. -- Abstract: Autophagy contributes to the homeostasis of many tissues, yet its role in epithelia is incompletely understood. A recent report proposed that Atg5-dependent autophagy in thymic epithelial cells is essential for their function in the negative selection of self-reactive T-cells and, thus, for the suppression of tissue inflammation. Here we crossed mice carrying floxed alleles of the Atg5 gene with mice expressing the Cre recombinase under the control of the keratin K5 promoter to suppress autophagy in all K5-positive epithelia. The efficiency of autophagy abrogation was confirmed by immunoanalyses of LC3, which was converted to the autophagy-associated LC3-II form in normal but not Atg5-deficient cells, and of p62, which accumulated in Atg5-deficient cells. Mice carrying the epithelium-specific deletion of Atg5 showed normal weight gain, absence of tissue inflammation, and a normal morphology of the thymic epithelium. By contrast, autophagy-deficient epithelial cells of the preputial gland showed aberrant eosinophilic staining in histology and premature degradation of nuclear DNA during terminal differentiation. Taken together, the results of this study suggest that autophagy is dispensable for the suppression of autoimmunity by thymic epithelial cells but essential for normal differentiation of the preputial gland in mice.

  10. Engineering Computer Games: A Parallel Learning Opportunity for Undergraduate Engineering and Primary (K-5 Students

    Directory of Open Access Journals (Sweden)

    Mark Michael Budnik

    2011-04-01

    Full Text Available In this paper, we present how our College of Engineering is developing a growing portfolio of engineering computer games as a parallel learning opportunity for undergraduate engineering and primary (grade K-5 students. Around the world, many schools provide secondary students (grade 6-12 with opportunities to pursue pre-engineering classes. However, by the time students reach this age, many of them have already determined their educational goals and preferred careers. Our College of Engineering is developing resources to provide primary students, still in their educational formative years, with opportunities to learn more about engineering. One of these resources is a library of engineering games targeted to the primary student population. The games are designed by sophomore students in our College of Engineering. During their Introduction to Computational Techniques course, the students use the LabVIEW environment to develop the games. This software provides a wealth of design resources for the novice programmer; using it to develop the games strengthens the undergraduates

  11. An unexpected oxidation: NaK5Cl2(S2O6)2 revisited

    Science.gov (United States)

    Harrison, William T. A.; Plater, M. John

    2017-01-01

    The title compound, NaK5Cl2(S2O6)2 [systematic name: sodium penta­potassium dichloride bis­(di­thio­nate)], arose as an unexpected product from an organic synthesis that used di­thio­nite (S2O4 2−) ions as a reducing agent to destroy excess permanganate ions. Compared to the previous study [Stanley (1953 ▸). Acta Cryst. 6, 187–196], the present tetra­gonal structure exhibits a root 2a × root 2a × c super-cell due to subtle changes in the orientations of the di­thio­nate anions. The structure can be visualized as a three-dimensional framework of [001] columns of alternating trans-NaO4Cl2 and KO4Cl2 octa­hedra cross-linked by the di­thio­nate ions with the inter­stices occupied by KO6Cl2 polyhedra to generate a densely packed three-dimensional framework. The asymmetric unit comprises two sodium ions (site symmetries 4 and -4, four potassium ions (site symmetries = -4, 4, 1 and 1), three chloride ions (site symmetries = 4, 4 and 2) and two half-di­thio­nate ions (all atoms on general positions). Both di­thio­nate ions are completed by crystallographic inversion symmetry. The crystal chosen for data collection was found to be rotationally twinned by 180° about the [100] axis in reciprocal space with a 0.6298 (13):0.3702 (13) domain ratio. PMID:28217339

  12. Inter-RMO Key Comparison EUROMET.L-K5.2004: Calibration of a step gauge

    DEFF Research Database (Denmark)

    Prieto, Emilio; Brown, Nicholas; Lassila, Antti

    2012-01-01

    The results of the inter-RMO key comparison EUROMET.L-K5.2004 on the calibration of a step gauge are reported. Eighteen National Metrology Institutes and one Designated Institute from four different metrological regions all over the world participated in this comparison which lasted three years...

  13. Moving the School and Dancing Education: Case Study Research of K-5 Students' Experiences in a Dance Residency

    Science.gov (United States)

    Leonard, Alison E.

    2012-01-01

    This dissertation chronicles the qualitative case study of a dance artist-in-residence at a diverse and inclusive K-5 school in an urban district, integrating science, social studies, physical education, music, and visual arts school curriculum and culminating in two public performances. This study focused on how students made meaning through this…

  14. K5/K14-positive cells contribute to salivary gland-like breast tumors with myoepithelial differentiation.

    Science.gov (United States)

    Boecker, Werner; Stenman, Goeran; Loening, Thomas; Andersson, Mattias K; Bankfalvi, Agnes; von Holstein, Sarah; Heegaard, Steffen; Lange, Alina; Berg, Tobias; Samoilova, Vera; Tiemann, Katharina; Buchwalow, Igor

    2013-08-01

    Salivary gland-like tumors of the breast show a great variety of architectural patterns and cellular differentiations such as glandular, myoepithelial, squamous, and even mesenchymal phenotypes. However, currently little is known about the evolution and cellular differentiation of these tumors. For that reason, we performed an in situ triple immunofluorescence lineage/differentiation tracing (isTILT) and qRT-PCR study of basal (K5/K14), glandular (K7/K8/18), and epidermal-specific squamous (K10) keratins, p63, and smooth muscle actin (SMA; myoepithelial marker) with the aim to construct and trace different cell lineages and define their cellular hierarchy in tumors with myoepithelial differentiation. isTILT analysis of a series of 28 breast, salivary, and lacrimal gland tumors, including pleomorphic adenomas (n=8), epithelial-myoepithelial tumors (n=9), and adenoid cystic carcinomas (n=11) revealed that all tumor types contained K5/K14-positive progenitor cells in varying frequencies from a few percent up to 15%. These K5/K14-positive tumor cells were found to differentiate to glandular- (K8/18-positive) and myoepithelial-lineage (SMA-positive)-specific cells and were also shown to generate various heterologeous cell differentiations such as squamous and mesenchymal progenies. p63 was co-expressed with K5/K14 in basal-like progenitor cells, myoepithelial, and squamous cells but not in glandular cells. Our results show that the corresponding counterpart tumors of breast and salivary/lacrimal glands have identical cellular compositions. Taken together, our isTILT and RNA-expression data indicate that look-alike tumors of the breast represent a special subgroup of basal-type tumors with benign or usually low malignant potential.

  15. Porcine MAP3K5 analysis: molecular cloning, characterization, tissue expression pattern, and copy number variations associated with residual feed intake.

    Science.gov (United States)

    Pu, L; Zhang, L C; Zhang, J S; Song, X; Wang, L G; Liang, J; Zhang, Y B; Liu, X; Yan, H; Zhang, T; Yue, J W; Li, N; Wu, Q Q; Wang, L X

    2016-08-12

    Mitogen-activated protein kinase kinase kinase 5 (MAP3K5) is essential for apoptosis, proliferation, differentiation, and immune responses, and is a candidate marker for residual feed intake (RFI) in pig. We cloned the full-length cDNA sequence of porcine MAP3K5 by rapid-amplification of cDNA ends. The 5451-bp gene contains a 5'-untranslated region (UTR) (718 bp), a coding region (3738 bp), and a 3'-UTR (995 bp), and encodes a peptide of 1245 amino acids, which shares 97, 99, 97, 93, 91, and 84% sequence identity with cattle, sheep, human, mouse, chicken, and zebrafish MAP3K5, respectively. The deduced MAP3K5 protein sequence contains two conserved domains: a DUF4071 domain and a protein kinase domain. Phylogenetic analysis showed that porcine MAP3K5 forms a separate branch to vicugna and camel MAP3K5. Tissue expression analysis using real-time quantitative polymerase chain reaction (qRT-PCR) revealed that MAP3K5 was expressed in the heart, liver, spleen, lung, kidney, muscle, fat, pancrea, ileum, and stomach tissues. Copy number variation was detected for porcine MAP3K5 and validated by qRT-PCR. Furthermore, a significant increase in average copy number was detected in the low RFI group when compared to the high RFI group in a Duroc pig population. These results provide useful information regarding the influence of MAP3K5 on RFI in pigs.

  16. Ecological and aromatic impact of two Gram-negative bacteria (Psychrobacter celer and Hafnia alvei) inoculated as part of the whole microbial community of an experimental smear soft cheese.

    Science.gov (United States)

    Irlinger, Françoise; Yung, Stéphane Ah Yuen In; Sarthou, Anne-Sophie; Delbès-Paus, Céline; Montel, Marie-Christine; Coton, Emmanuel; Coton, Monika; Helinck, Sandra

    2012-02-15

    The impact of the growth of two Gram-negative bacteria, Psychrobacter celer and Hafnia alvei, inoculated at 10(2) and 10(6) cfu/g, on the dynamics of a multispecies community as well as on volatile aroma compound production during cheese ripening was investigated. Results showed that P. celer was able to successfully implant itself in cheese, regardless of its inoculation level. However, when it was inoculated at a high level, the bacterial biodiversity was drastically lowered from day 25 to the end of ripening. Overall, the presence of P. celer led to the higher production of volatile aroma compounds such as aldehydes, ketones and sulfur compounds. Regardless of its inoculation level, H. alvei barely affected the growth of the bacterial community and was subdominant at the end of ripening. It influenced total volatile aroma compound production with volatile sulfur compounds being the most abundant. Overall, these two bacteria were able to implant themselves in a cheese community and significantly contributed to the aromatic properties of the cheese. Their role in flavoring and their interactions with the technological microorganisms must be considered during cheese ripening and should be further investigated.

  17. Preparation and antioxidant activities of a sulfated derivative of exopolysaccharide from Escherichia coil K5%Escherichia coli K5胞外多糖硫酸酯衍生物的制备及其体外抗氧化活性研究

    Institute of Scientific and Technical Information of China (English)

    王华; 徐静静; 曹凤; 陈敬华

    2012-01-01

    对Escherichia coliK5菌株进行发酵培养,发酵液上清经超滤、醇沉、Sevage法脱蛋白、透析冻干,再经DEAE琼脂糖柱、G75葡聚糖柱分离纯化后得到K5多糖(K5)。以三氧化硫吡啶为硫酸酯化剂,对K5多糖N位进行了硫酸酯化,制备了K5多糖的硫酸酯衍生物(NS-K5),二糖分析结果显示,N位硫酸酯化率达到57%。并对硫酸酯化前后的K5多糖的抗氧化性能进行了研究,结果显示,一定浓度范围内,NS-K5多糖还原力较K5高,当K5和NS-K5浓度达到1mg/mL时,对羟基自由基的清除率分别达到17.7%、25.6%,对DPPH自由基的清除率分别达到26.1%、45%。实验结果表明,NS-K5的抗氧化活性要高于K5。%Escherichia coil K5 strain was cultivated by fermentation,the supernatant was treated by ultrafiltration, exopolysaccharide(EPS) was extracted by ethanol precipitation,and then purified by Sevage method,dialysis, freeze-dried, DEAE-Sepharose and Sephadex G-75 column,finally high-purity K5 polysaccharide(K5) was obtained. N site of the K5 polysaccharide was chemically sulfated by Sulfur trioxide pyridine complex,NS-K5 polysaccharide(NS-K5) was prepared,and disaccharide analysis revealed that N-sulfation rate was up to 57%. The antioxidant capacity of K5 polysaccharideand N-sulfated K5 polysaccharide was investigated,the results showed that within a certain concentration range,the reducing activity of NS-K5 was powerful over K5, when the concentration of K5 and NS-K5 was up to lmg/mL,the hydroxyl radical scavenging rates were 17.7% ,25.6% ,and DPPH radical scavenging rates were 26.1% ,45% ,respectively. The result indicated that NS-K5 showed stronger antioxidant activity than K5.

  18. K5/K14-positive cells contribute to salivary gland-like breast tumors with myoepithelial differentiation

    DEFF Research Database (Denmark)

    Boecker, Werner; Stenman, Goeran; Loening, Thomas

    2013-01-01

    Salivary gland-like tumors of the breast show a great variety of architectural patterns and cellular differentiations such as glandular, myoepithelial, squamous, and even mesenchymal phenotypes. However, currently little is known about the evolution and cellular differentiation of these tumors....... For that reason, we performed an in situ triple immunofluorescence lineage/differentiation tracing (isTILT) and qRT-PCR study of basal (K5/K14), glandular (K7/K8/18), and epidermal-specific squamous (K10) keratins, p63, and smooth muscle actin (SMA; myoepithelial marker) with the aim to construct and trace...... different cell lineages and define their cellular hierarchy in tumors with myoepithelial differentiation. isTILT analysis of a series of 28 breast, salivary, and lacrimal gland tumors, including pleomorphic adenomas (n=8), epithelial-myoepithelial tumors (n=9), and adenoid cystic carcinomas (n=11) revealed...

  19. 图K(5m,5)的自同态的自同态谱%On the Andomorphism Spectrum of K(5m,5)

    Institute of Scientific and Technical Information of China (English)

    余鋆

    2012-01-01

    In this paper, we obtain that Aut(K(5m, 5)) ≈D5m,sEnd(k(5m, 5))=Aut(k(5m, 5) and End(K(5m,5)) =qEnd(K(5m, 5)), where Ds. is the dihedral group of order 5m. Furthermore, we solve some enumerative problems of End(K(5m, 5)), and give the endomorphism spectrum of k(5m, 5).%从循环完全图K(5m,5)的结构出发,得到Aut(K(5m,5))≈D5m,其中D5m是5m阶的二面体群,sEnd(k(5m,5))=Aut(k(5m,5),End(K(5m,5))=qEnd(K(5m,5))。同时也解决了End(K(5m,5))的一些记数问题,给出了此类图的自同态谱。

  20. The Epstein-Barr Virus-encoded miR-BART22 targets MAP3K5 to promote host cell proliferative and invasive abilities in nasopharyngeal carcinoma

    Science.gov (United States)

    Chen, Ruichao; Zhang, Minfeng; Li, Qiulian; Xiong, Hanzhen; Liu, Shaoyan; Fang, Weiyi; Zhang, Qianbing; Liu, Zhen; Xu, Xuehu; Jiang, Qingping

    2017-01-01

    miR-BART22, a new discovered Epstein-Barr virus (EBV) miRNA, is abundant in Nasopharyngeal carcinoma (NPC). It has been reported that miR-BART22 promoted the tumor development by down-modulating EBV LMP2 expression to evade the host immune response. But its cell target genes have still been obscure. We have reported an inverse correlation between the BART-22 and MAP3K5 protein expression in NPC tissues and NPC cell lines. Meanwhile, MAP3K5 protein expression level was significantly decreased in primary NPC tissues compared with nasopharyngitis when MAP3K5 mRNA expression was consistent in two group tissues. According to our data and target prediction by miRnada, we assume MAP3K5 is an important target gene of NPC. MAP3K5, also named apoptosis signal-regulating kinase1 (ASK1), is an important early answer gene in P38MAPK pathway and an apoptosis-related gene. In present study, MAP3K5 was verified the target gene of miR-BART22 by luciferase assay. miRBART-22 decreased MAP3K5 protein level. Moreover, it also decreased MAP3K5 downstream gene MAP2K4 expression in P38MAPK pathway, and even their activated phosphorylation forms. Additionally, we found stable transfection of miR-BAT22 could improve tumor cells' proliferative and invasive abilities in NPC cell line 5-8F. The data highlight the role of the EBV miR-BART22 in regulating genes involving in apoptosis and some important pathways to promote cancer development. And it also raises the possibility that inhibitors of miR-BART22 can be as a therapeutic strategy for NPC and other EBV-infected tumors treatment. PMID:28243335

  1. Probing M subdwarf metallicity with an esdK5+esdM5.5 binary

    CERN Document Server

    Pavlenko, Ya V; Gálvez-Ortiz, M C; Kushniruk, I O; Jones, H R A

    2015-01-01

    We present a spectral analysis of the binary G 224-58 AB that consists of the coolest M extreme subdwarf (esdM5.5) and a brighter primary (esdK5). This binary may serve as a benchmark for metallicity measurement calibrations and as a test-bed for atmospheric and evolutionary models for esdM objects. We determine abundances primarily using high resolution optical spectra of the primary. Other parameters were determined from the fits of synthetic spectra computed with these abundances to the observed spectra from 0.4 to 2.5 microns for both components. We determine \\Tef =4625 $\\pm$ 100 K, \\logg = 4.5 $\\pm$ 0.5 for the A component and \\Tef = 3200 $\\pm$ 100 K, \\logg = 5.0 $\\pm$ 0.5, for the B component. We obtained abundances of [Mg/H]=$-$1.51$\\pm$0.08, [Ca/H]=$-$1.39$\\pm$0.03, [Ti/H]=$-$1.37$\\pm$0.03 for alpha group elements and [CrH]=$-$1.88$\\pm$0.07, [Mn/H]=$-$1.96$\\pm$0.06, [Fe/H]=$-$1.92$\\pm$0.02, [Ni/H]=$-$1.81$\\pm$0.05 and [Ba/H]W=$-$1.87$\\pm$0.11 for iron group elements from fits to the spectral lines obs...

  2. Discussion for the Innovation of Automatic Welding Practice Education Based on K5 Demonstrate Education Method%基于K5示教法的自动化焊接实践教学改革初探

    Institute of Scientific and Technical Information of China (English)

    曲芳; 沈斌; 岳旭东; 刘存宪; 海波; 高路

    2016-01-01

    在自动化焊接的学生实践教学环节中,学校需投入大量的人力、物力和财力,以保障实践教学工作的有序进行。然而,部分高校由于受到各方面条件的限制,不得不减少或取消实践教学环节,这对于提高学生的实践动手能力造成了很大的阻碍。拟利用黑龙江科技大学实训中心现有设备:奥地利IGM公司的RTI330型自动化焊接机器人,针对该校材料学院焊接专业在校学生,采用K5示教器模拟实践操作环节,通过人机交互界面以示教的方法让学生更多地去感受实际焊接过程,使更多学生得到实践锻炼的机会,为自动化焊接实践环节节省了材料和设备。在整个教学环节中,既发挥了教师的主导作用,又体现了学生的认知主体作用,真正实现了产学一体化,学做合一,为用人单位培养出适应行业发展的应用型焊接人才。%In the segment of the students' automatic welding practice education, the universities need to investment in generous manpower, material and wealth in order to insure the practice education work to carry out smoothly. However, part of the universities are enslaved to the conditions in all direction, they have to reduce or cancel the segment of the practice education, this action creates impediment of enhancing the students’practice manipulative ability. We plan to use the existing automatic welding robot equipment of the center of training and practice in our university, which is from IGM company of Austria with the version of RTI330, focuses on the students whose major is welding of Material Science Institute, use K5 demonstrate education implement to simulation the segment of the practice manipulation, by means of human-computer interaction interface and the demonstrate education method to let the students to feel the reality welding process still more, get more chances of practice and save more materials and equipments for the

  3. The RING-CH ligase K5 antagonizes restriction of KSHV and HIV-1 particle release by mediating ubiquitin-dependent endosomal degradation of tetherin.

    Directory of Open Access Journals (Sweden)

    Claire Pardieu

    2010-04-01

    Full Text Available Tetherin (CD317/BST2 is an interferon-induced membrane protein that inhibits the release of diverse enveloped viral particles. Several mammalian viruses have evolved countermeasures that inactivate tetherin, with the prototype being the HIV-1 Vpu protein. Here we show that the human herpesvirus Kaposi's sarcoma-associated herpesvirus (KSHV is sensitive to tetherin restriction and its activity is counteracted by the KSHV encoded RING-CH E3 ubiquitin ligase K5. Tetherin expression in KSHV-infected cells inhibits viral particle release, as does depletion of K5 protein using RNA interference. K5 induces a species-specific downregulation of human tetherin from the cell surface followed by its endosomal degradation. We show that K5 targets a single lysine (K18 in the cytoplasmic tail of tetherin for ubiquitination, leading to relocalization of tetherin to CD63-positive endosomal compartments. Tetherin degradation is dependent on ESCRT-mediated endosomal sorting, but does not require a tyrosine-based sorting signal in the tetherin cytoplasmic tail. Importantly, we also show that the ability of K5 to substitute for Vpu in HIV-1 release is entirely dependent on K18 and the RING-CH domain of K5. By contrast, while Vpu induces ubiquitination of tetherin cytoplasmic tail lysine residues, mutation of these positions has no effect on its antagonism of tetherin function, and residual tetherin is associated with the trans-Golgi network (TGN in Vpu-expressing cells. Taken together our results demonstrate that K5 is a mechanistically distinct viral countermeasure to tetherin-mediated restriction, and that herpesvirus particle release is sensitive to this mode of antiviral inhibition.

  4. Evaluation of a multiplex PCR for detection of serotypes K1, K2 and K5 in Klebsiella sp. and comparison of isolates within these serotypes.

    Science.gov (United States)

    Turton, Jane F; Baklan, Hatice; Siu, L K; Kaufmann, Mary E; Pitt, Tyrone L

    2008-07-01

    A multiplex PCR using targets within the serotype-specific region of the capsular polysaccharide synthesis gene cluster of serotypes K1, K2 and K5 was evaluated using the 77 reference serotype strains of Klebsiella, and a panel of clinical isolates subjected previously to conventional serotyping. The PCR was highly specific for these serotypes, which are those most associated with virulence in humans and horses. PCR confirmed that isolates of the K5 serotype had cross-reacted with antiserum for other serotypes, particularly for K7. K5 isolates received by our laboratory were almost exclusively from thoroughbred horses, and were submitted for screening prior to breeding programmes. Most, including a reference strain isolated in 1955, belonged to a cluster of genetically similar isolates of sequence type (ST) 60. K1 isolates, all from humans, belonged to a previously identified cluster of ST 23.

  5. Recombinant Escherichia coli K5 strain with the deletion of waaR gene decreases the molecular weight of the heparosan capsular polysaccharide.

    Science.gov (United States)

    Huang, Haichan; Liu, Xiaobo; Lv, Shencong; Zhong, Weihong; Zhang, Fuming; Linhardt, Robert J

    2016-09-01

    Heparosan, the capsular polysaccharide of Escherichia coli K5 having a carbohydrate backbone similar to that of heparin, has become a potential precursor for bioengineering heparin. In the heparosan biosynthesis pathway, the gene waaR encoding α-1-, 2- glycosyltransferase catalyze s the third glucosyl residues linking to the oligosaccharide chain. In the present study, a waaR deletion mutant of E. coli K5 was constructed. The mutant showed improvement of capsule polysaccharide yield. It is interesting that the heparosan molecular weight of the mutant is reduced and may become more suitable as a precursor for the production of low molecular weight heparin derived from the wild-type K5 capsular polysaccharide.

  6. Modeling Math Growth Trajectory--An Application of Conventional Growth Curve Model and Growth Mixture Model to ECLS K-5 Data

    Science.gov (United States)

    Lu, Yi

    2016-01-01

    To model students' math growth trajectory, three conventional growth curve models and three growth mixture models are applied to the Early Childhood Longitudinal Study Kindergarten-Fifth grade (ECLS K-5) dataset in this study. The results of conventional growth curve model show gender differences on math IRT scores. When holding socio-economic…

  7. Preparation, characterization and photocatalytic studies of Cu2+, Sn2+ and N3− substituted K5Sb5P2O20

    Indian Academy of Sciences (India)

    Ch Sudhakar Reddy; Sreenu K; J R Reddy; A Hari Padmasri; Ravi Gundeboina; M Vithal

    2016-04-01

    Potassium antimony phosphates (K-Sb-P-O) exhibit different structural networks and therefore they were studied as photocatalysts in the present investigation. K5Sb5P2O20 was prepared by solid state method. Metal ions (Cu2+ and Sn2+), and non-metal anion, N3−, were substituted into the K5Sb5P2O20 for possible enhancement of photocatalytic activity. The precursor and substituted compounds were characterized by powder X-ray diffraction, FT-IR, SEM-EDS and UV-Vis diffuse reflectance spectra. Nitrogen substitution into K5Sb5P2O20 lattice was studied by O-N-H and XPS measurements. The photocatalytic activity of all the compounds was studied by degradation of methylene blue and methyl violet. The ion-substituted K5Sb5P2O20 have shown higher photocatalytic activity against both the dyes. The role of reactive intermediate species produced in the photocatalytic reaction was studied using their appropriate scavengers.

  8. Expanding the Role of K-5 Science Instruction in Educational Reform: Implications of an Interdisciplinary Model for Integrating Science and Reading

    Science.gov (United States)

    Romance, Nancy R.; Vitale, Michael R.

    2012-01-01

    Addressed is the current practice in educational reform of reducing time for science instruction in favor of traditional reading/language arts instruction. In contrast, presented is an evidence-based rationale for increasing instructional time for K-5 science instruction as an educational reform initiative. Overviewed are consensus…

  9. Condensation patterns of prophase/prometaphase chromosome are correlated with H4K5 histone acetylation and genomic DNA contents in plants.

    Science.gov (United States)

    Feitoza, Lidiane; Costa, Lucas; Guerra, Marcelo

    2017-01-01

    Mitotic prophase chromosome condensation plays an essential role in nuclear division being therefore regulated by highly conserved mechanisms. However, degrees of chromatin condensation in prophase-prometaphase cells may vary along the chromosomes resulting in specific condensation patterns. We examined different condensation patterns (CPs) of prophase and prometaphase chromosomes and investigated their relationship with genome size and distribution of histone H4 acetylated at lysine 5 (H4K5ac) in 17 plant species. Our results showed that most species with small genomes (2C < 5 pg) (Arachis pusilla, Bixa orellana, Costus spiralis, Eleutherine bulbosa, Indigofera campestris, Phaseolus lunatus, P. vulgaris, Poncirus trifoliata, and Solanum lycopersicum) displayed prophase chromosomes with late condensing terminal regions that were highly enriched in H4K5ac, and early condensing regions with apparently non-acetylated proximal chromatin. The species with large genomes (Allium cepa, Callisia repens, Araucaria angustifolia and Nothoscordum pulchellum) displayed uniformly condensed and acetylated prophase/prometaphase chromosomes. Three species with small genomes (Eleocharis geniculata, Rhynchospora pubera, and R. tenuis) displayed CP and H4K5ac labeling patterns similar to species with large genomes, whereas a forth species (Emilia sonchifolia) exhibited a gradual chromosome labeling, being more acetylated in the terminal regions and less acetylated in the proximal ones. The nucleolus organizer chromatin was the only chromosomal region that in prometaphase or metaphase could be hyperacetylated, hypoacetylated or non-acetylated, depending on the species. Our data indicate that the CP of a plant chromosome complement is influenced but not exclusively determined by nuclear and chromosomal DNA contents, whereas the CP of individual chromosomes is clearly correlated with H4K5ac distribution.

  10. Final report on COOMET.M.M-K5: Key comparison in the field of multiples and submultiples of the kilogram (COOMET 258/RU/02)

    Science.gov (United States)

    Snegov, V. S.

    2014-01-01

    This report summarizes the results of a comparison of mass standards conducted between four participating members of the Euro-Asian Cooperation of National metrological Institutes (COOMET). The COOMET key comparisons are usually carried out on those schemes that were proposed and implemented by the Consultative Committee for Mass and Related Quantities of the CIPM. Measurement comparisons bring to the laboratories confidence in the measurement standards and lead to their international acceptance. This comparison arose from discussions at the 9th meeting of TC 1.6 'Mass and Related Quantities' on 21-23 April 2004, SMU, Slovakia. The comparison is internally identified as COOMET 258/RU/02 and corresponds to the KCDB identifier COOMET.M.M-K5, as attributed by the BIPM. The purpose of the key comparison COOMET.M.M-K5 'Comparison in the field of multiples and submultiples of the kilogram' is to compare the results of measurements obtained by the participants. Two weights sets with five nominal mass values 2 kg, 200 g, 50 g, 1 g and 200 mg (OIML Class E1) were used as transfer standards. These nominal values were chosen to follow the second phase of the CCM key comparison CCM.M-K5. The All-Russian D I Mendeleyev Research Institute for Metrology, VNIIM, was the pilot laboratory as well as the linking laboratory to CCM.M-K5. The comparison was carried out from May 2015 to July 2008. In 2007, measurements were carried out by Kazakhstan Institute of Metrology (RSE 'KazInMetr') on their own initiative. The computation of the degrees of equivalence shows a generally good agreement between participants. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCM, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

  11. DUOX2 promotes the elimination of the Klebsiella pneumoniae strain K5 from T24 cells through the reactive oxygen species pathway.

    Science.gov (United States)

    Lu, Huixia; Wu, Qi; Yang, Huijun

    2015-08-01

    Dual oxidase 2 (DUOX2) plays a major role in host defense in intestinal and airway epithelial cells through the reactive oxygen species (ROS) pathway. Klebsiella pneumoniae is a uropathogen that causes urinary tract infections. It is not known whether DUOX2 plays a role in host defense in bladder cancer epithelial cells. It is also not known whether Klebsiella pneumoniae invades T24 human bladder carcinoma cells and whether DUOX2 plays a role in eliminating the Klebsiella pneumoniae strain K5 through the ROS pathway in T24 cells. Thus, in the present study, we aimed to investigate the infectious capability of the Klebsiella pneumoniae K5 strain and the immunity-promoting capability of DUOX2 in T24 cells. We quantified the number of viable intracellular bacteria using the plate count method. DUOX2 expression was evaluated by western blot analysis and reverse transcription-quantitative PCR (RT-qPCR) following treatment with or without multiple cytokines, phorbol 12-myristate 13-acetate (PMA), muramyl dipeptide (MDP), N-acetylmuramyl-D-alanyl-D-isoglutamine (MDP-DD), H2O2 inhibitor, catalase (CAT), the nicotinamide adenine dinucleotide phosphate-oxidase (NADPH) oxidase inhibitor, diphenyleneiodonium (DPI), or siRNA targeting DUOX2 (siDUOX2). The levels of ROS in the T24 cells infected with the K5 strain were examined following treatment with DPI, CAT or siDUOX2. Our results revealed that DUOX2 expression increased and the number of viable intracellular bacteria decreased in the T24 cells following infection with the K4 bacteria. Treatment with the cytokines and MDP and PMA also induced DUOX2 expression and decreased the number of viable intracellular bacteria. The levels of ROS also increased following treatment with the cytokines and MDP and PMA. However, when the cells were treated with the inhibitors (DPI or CAT), these effects were all reversed. Our data demonstrated that DUOX2 played an important role in innate immunity against bacterial cytoinvasion through the

  12. K5R8 METAR

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — METAR is a routine scheduled observation and is the primary observation code used in the United States to satisfy requirements for reporting surface meteorological...

  13. Characterisation of the effects of ATPA, a GLU(K5) kainate receptor agonist, on GABAergic synaptic transmission in the CA1 region of rat hippocampal slices.

    Science.gov (United States)

    Clarke, V R J; Collingridge, G L

    2004-09-01

    Kainate receptors are implicated in a variety of physiological and pathological processes in the CNS. Previously we demonstrated that (RS)-2-amino-3-(3-hydroxy-5-tert-butylisoxazol-4-yl)propanoic acid (ATPA), a selective agonist for the GLU(K5) subtype of kainate receptor, depresses monosynaptically evoked inhibitory postsynaptic potentials (IPSPs) in the CA1 region of the rat hippocampus. In the current study, we provide a more detailed characterisation of this effect. Firstly, our data demonstrate a rank order of potency of domoate>kainate>ATPA>alpha-amino-3-(3-hydroxy-5-methyl-4-isoxalolyl)propionic acid Secondly, we confirm that the effects of ATPA are not mediated indirectly via the activation of gamma-aminobutyric acid receptors (i.e. either GABA(A) or GABA(B)). Thirdly, we show that the small increase in conductance induced by ATPA is insufficient to account for the depression of monosynaptic inhibition. Fourthly, we show that the effects of ATPA on IPSPs are antagonised by the GLU(K5)-selective antagonist (3S, 4aR, 6S, 8aR)-6-(4-carboxyphenyl)methyl-1,2,3,4,4a,5,6,7,8,8a-decahydroisoquinoline-3-carboxylic acid (LY382884). However, LY382884 is less potent as an antagonist of the effects of ATPA on IPSPs compared to its depressant effect on EPSPs.

  14. Final report of key comparison AFRIMETS.AUV.A-K5: primary pressure calibration of LS1P microphones according to IEC 61094-2, over the frequency range 2 Hz to 10 kHz.

    Science.gov (United States)

    Nel, R.; Avison, J.; Harris, P.; Blabla, M.; Hämäläinen, J.

    2017-01-01

    The degrees of equivalence of the AFRIMETS.AUV.A-K5 regional key comparison are reported here as the final report. The scope of the comparison covered the complex pressure sensitivities of two LS1P microphones over the frequency range 2 Hz to 10 kHz in accordance with IEC 61094-2: 2009. Four national metrology institutes from two different regional metrology organisations participated in the comparison. Two LS1P microphones were circulated simultaneously to all the participants in a circular configuration. One of the microphones sensitivity shifted and all results associated with this microphone were subsequently excluded from further analysis and linking. The AFRIMETS.AUV.A-K5 comparison results were linked to the CCAUV.A-K5 comparison results via dual participation in the CCAUV.A-K5 and AFRIMETS.AUV.A-K5 comparisons. The degrees of equivalence, linked to the CCAUV.A-K5 comparison, were calculated for all participants of this comparison. Main text To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCAUV, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

  15. The CO2 Abundance in Comets C/2012 K1 (PanSTARRS), C/2012 K5 (LINEAR), and 290P/Jager as Measured with Spitzer

    CERN Document Server

    McKay, Adam J; Cochran, Anita L; Bodewits, Dennis; DiSanti, Michael A; Russo, Neil Dello; Lisse, Carey M

    2015-01-01

    We present analysis of observations of CO2 and OI emission in three comets to measure the CO2 abundance and evaluate the possibility of employing observations of OI emission in comets as a proxy for CO2. We obtained NIR imaging sensitive to CO2 of comets C/2012 K1 (PanSTARRS), C/2012 K5 (LINEAR), and 290P/Jager with the IRAC instrument on Spitzer. We acquired observations of OI emission in these comets with the ARCES echelle spectrometer mounted on the 3.5-meter telescope at Apache Point Observatory and observations of OH with the Swift observatory (PanSTARRS) and with Keck HIRES (Jager). The CO2/H2O ratios derived from the Spitzer images are 12.6 +/- 1.3% (PanSTARRS), 28.9 +/- 3.6% (LINEAR), and 31.3 +/- 4.2% (Jager). These abundances are derived under the assumption that contamination from CO emission is negligible. The CO2 abundance for PanSTARRS is close to the average abundance measured in comets at similar heliocentric distance to date, while the abundances measured for LINEAR and Jager are significantl...

  16. Final report on key comparison CCAUV.A-K5: pressure calibration of laboratory standard microphones in the frequency range 2 Hz to 10 kHz

    Science.gov (United States)

    Avison, Janine; Barham, Richard

    2014-01-01

    This document and the accompanying spreadsheets constitute the final report for key comparison CCAUV.A-K5 on the pressure calibration of laboratory standard microphones in the frequency range from 2 Hz to 10 kHz. Twelve national measurement institutes took part in the key comparison and the National Physical Laboratory piloted the project. Two laboratory standard microphones IEC type LS1P were circulated to the participants and results in the form of regular calibration certificates were collected throughout the project. One of the microphones was subsequently deemed to have compromised stability for the purpose of deriving a reference value. Consequently the key comparison reference value (KCRV) has been made based on the weighted mean results for sensitivity level and for sensitivity phase from just one of the microphones. Corresponding degrees of equivalence (DoEs) have also been calculated and are presented. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCAUV, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

  17. The radii of the nearby K5V and K7V stars 61 Cyg A & B - CHARA/FLUOR interferometry and CESAM2k modeling

    CERN Document Server

    Kervella, Pierre; Pichon, Bernard; Thévenin, Frédéric; Heiter, Ulrike; Bigot, Lionel; Brummelaar, Theo A Ten; Mcalister, Harold A; Ridgway, Stephen T; Turner, Nils; Sturmann, Judit; Sturmann, Laszlo; Goldfinger, P J; Farrington, Christopher

    2008-01-01

    Context: The main sequence binary star 61 Cyg (K5V+K7V) is our nearest stellar neighbour in the northern hemisphere. This proximity makes it a particularly well suited system for very high accuracy interferometric radius measurements. Aims: Our goal is to constrain the poorly known evolutionary status and age of this bright binary star. Methods: We obtained high accuracy interferometric observations in the infrared K' band, using the CHARA/FLUOR instrument. We then computed evolutionary models of 61 Cyg A & B with the CESAM2k code. As model constraints, we used a combination of observational parameters from classical observation methods (photometry, spectroscopy) as well as our new interferometric radii. Results: The measured limb darkened disk angular diameters are theta_LD(A) = 1.775 +/- 0.013 mas and theta_LD(B) = 1.581 +/- 0.022 mas, respectively for 61 Cyg A and B. Considering the high accuracy parallaxes available, these values translate into photospheric radii of R(A) = 0.665 +/- 0.005 Rsun and R(B...

  18. Characterisation of the effects of ATPA, a GLU(K5) receptor selective agonist, on excitatory synaptic transmission in area CA1 of rat hippocampal slices.

    Science.gov (United States)

    Clarke, V R J; Collingridge, G L

    2002-06-01

    Kainate receptors are involved in a variety of synaptic functions in the CNS including the regulation of excitatory synaptic transmission. Previously we described the depressant action of the GLU(K5) selective agonist (RS)-2-amino-3-(3-hydroxy-5-tert-butylisoxazol-4-yl)propanoic acid (ATPA) on synaptic transmission in the Schaffer collateral-commissural pathway of rat hippocampal slices. In the present study we report several new features of the actions of ATPA at this synapse. Firstly, the effectiveness of ATPA is developmentally regulated. Secondly, the effects of ATPA decline during prolonged or repeated applications. Thirdly, the effects of ATPA are not mediated indirectly via activation of GABA(A), GABA(B), muscarinic or adenosine A(1) receptors. Fourthly, elevating extracellular Ca(2+) from 2 to 4 mM antagonises the effects of ATPA. Some differences between the actions of ATPA and kainate on synaptic transmission in the Schaffer collateral-commissural pathway are also noted.

  19. STEM视角下的美国科学课程教材分析--以FOSS K-5年级科学教材为例%An Analysis Study of American Science Textbooks from STEM Perspective-Taking the FOSS K-5 Edition as an Example

    Institute of Scientific and Technical Information of China (English)

    周鹏琴; 徐唱; 张韵; 李芒

    2016-01-01

    为探究美国科学课程的教学内容特点,从而了解美国科学教育的发展状况,该文以STEM教育为视角,应用定量与质性相结合的研究方法,对美国FOSS K-5年级加利福尼亚2007年版的科学教材SCIENCE RESOURCES知识点和教学活动等内容进行分析。从教材知识点的整体分布,物质科学、生命科学、地球科学三大主题知识点分布以及教学活动等其他内容三个方面获得研究结果。结合已有研究,得出结论:教材注重学科间的相互渗透与干涉,强调STEM教育视野下综合性的科学素养,体现STEM教育对生活的价值。最后获得启示:我国科学教育发展应树立正确的科学教育理念、提高学科地位、建立完备的课程体系、充分发挥教师的作用、实现从知识到实践的跨越、加强实证研究。%In order to explore the teaching content characteristics of American Science Curriculum and understand the development of Science Education in the United States, this study analyzed the knowledge points and teaching activities of FOSS Grades K-5 California Edition © 2007 “SCIENCE RESOURCES” from STEM perspective, combining quantitative and qualitative research methods. The knowledge points of the three main themes (Physical Sciences, Life Sciences and Earth Sciences) and teaching activities in the textbooks were coded and counted. The result shows that: American science textbook focus on the mutual penetration and interference between subjects, the comprehensive scientiifc literacy, and the value of STEM education to life. Finally, attain the enlightenment about developing the Science Education: we should establish correct science educational concept, improve the subject status, establish a comprehensive curriculum system, give full play to the role of teachers, realize the leap from knowledge to practice and reinforce the empirical research.

  20. Distorted Tetrahedral CoII in K5H[CoW12O40]·xH2O Probed by 2p3d Resonant Inelastic X-ray Scattering

    NARCIS (Netherlands)

    Liu, LIU BY; Wang, Ru Pan; Glass, Elliot N.; Hill, Craig L.; Cuk, Tanja; Okamoto, Jun; Huang, Di Jing; Van Schooneveld, Matti M.; De Groot, Frank M F

    2016-01-01

    The Co 2p3/2 X-ray absorption spectroscopy and high-energy-resolution (∼0.09 eV fwhm) 2p3d resonant inelastic X-ray scattering (RIXS) spectra of the single-cobalt-centered polyoxometalate K5H[CoW12O40]·xH2O were measured. The low-energy dd transition features at 0.55 eV, unmeasurable with

  1. Multicolor immunofluorescence reveals that p63- and/or K5-positive progenitor cells contribute to normal breast epithelium and usual ductal hyperplasia but not to low-grade intraepithelial neoplasia of the breast.

    Science.gov (United States)

    Boecker, Werner; Stenman, Göran; Schroeder, Tina; Schumacher, Udo; Loening, Thomas; Stahnke, Lisa; Löhnert, Catharina; Siering, Robert Michael; Kuper, Arthur; Samoilova, Vera; Tiemann, Markus; Korsching, Eberhard; Buchwalow, Igor

    2017-03-16

    We contend that knowledge about the cellular composition of normal breast epithelium is a prerequisite for understanding proliferative breast disease. Against this background, we used multicolor immunofluorescence to study normal breast epithelium and two types of intraepithelial proliferative breast lesion for expression of the p63, basal keratin K5, glandular keratin K8/18, SMA, ER-alpha, and Ki67. We studied eight normal breast epithelium samples, 12 cases of usual ductal hyperplasia, and 33 cases of low-grade intraepithelial neoplasia (9 flat epithelial atypia, 14 low-grade ductal carcinoma in situ and 10 cases of lobular neoplasia). Usual ductal hyperplasia showed striking similarity to normal luminal breast epithelium including p63+ and/or K5+ luminal progenitor cells and the full spectrum of luminal progeny cells. In normal breast epithelium and usual ductal hyperplasia, expression of ER-alpha was associated with lack of expression of the proliferation antigen Ki67. In contrast, we found in both types of low-grade intraepithelial neoplasia robust expression of keratin K8/18 and a positive association between ER-alpha and Ki67 expression. However, these lesions were consistently negative for p63 and/or K5. Our observational study supports the view that usual ductal hyperplasia and low-grade intraepithelial neoplasia are different entities rather than part of a spectrum of the same disease. We propose a new operational model of cell differentiation that may serve to better understand correlations between normal breast epithelium and proliferative breast diseases. From our data we conclude that p63+ and/or K5+ progenitor cells contribute to maintenance of normal epithelium and usual ductal hyperplasia, but not to low-grade intraepithelial neoplasia of the breast.

  2. Coordinated bifluoride ions in the first thiofluoride molybdenum triangular cluster complex: synthesis and crystal structure of K5[Mo3S4F7(FHF)2]·2H2O

    Science.gov (United States)

    Mironov, Yu. V.; Yarovoi, S. S.; Solodovnikov, S. F.; Fedorov, V. E.

    2003-08-01

    The first triangular thiofluoride cluster complex of molybdenum K5[Mo3S4F7(FHF)2]·2H2O with unexpected coordination of bifluoride ions has been synthesized by the reaction of Mo3S7Br4 with molten KHF2. The compound was characterized by single crystal X-ray diffraction. The compound crystallizes in the orthorhombic space group Cmc21 with four formulas in unit cell of dimensions a=15.1060(20) Å,b=8.7820(9) Å,c=14.3358(13) Å,V=1901.8(4) Å3.

  3. Crystal Structure of the 1:2 Stoichiometric Nd: [α-SiW11O39]8-: K5Na5H3[Nd(α-SiW11O39)2]·6H2O

    Institute of Scientific and Technical Information of China (English)

    HAN Qiu-Xia; WANG Jing-Ping; NIU Jing-Yang

    2007-01-01

    Single-crystal X-ray structural analysis of K5Na5H3[Nd(α-SiW11O39)2]·6H2O(triclinic, space group P1-, a = 13.7738(10), b = 19.722(2), c = 20.6647(15) (A), α = 111.0090(10), β =105.1740(10), γ = 98-6870(10)°, Z = 2, V = 4867.2(8), Mr = 5914.40, Dc = 4.026, μ = 26.754 mm-1,F(000) = 5076, R = 0.0750 and wR = 0.2077) reveals that two [α-SiW11O39]8- moieties are connected through one Nd atom which is in a square antiprismatic coordination environment by eight oxygen atoms from two [α-SiW11O391]8- moieties. The Nd(Ⅲ) ion is substituted for a [WO]4+unit in the "cap" region of the tungsten-oxygen framework of the parent Keggin ion. Disordered Na+cations and water molecules reside outside these channels, leaving empty pores with an intersecting slot (13 (A) × 10 (A)).

  4. Platelet-Activating Factor Blockade Inhibits the T-Helper Type 17 Cell Pathway and Suppresses Psoriasis-Like Skin Disease in K5.hTGF-β1 Transgenic Mice

    Science.gov (United States)

    Singh, Tej Pratap; Huettner, Barbara; Koefeler, Harald; Mayer, Gerlinde; Bambach, Isabella; Wallbrecht, Katrin; Schön, Michael P.; Wolf, Peter

    2011-01-01

    Platelet-activating factor (PAF), a potent biolipid mediator, is involved in a variety of cellular transduction pathways and plays a prominent role in inducing inflammation in different organs. We used K5.hTGF-β1 transgenic mice, which exhibit an inflammatory skin disorder and molecular and cytokine abnormalities with strong similarities to human psoriasis, to study the pathogenic role of PAF. We found that injecting PAF into the skin of transgenic mice led to inflammation and accelerated manifestation of the psoriatic phenotype by a local effect. In contrast, injecting mice with PAF receptor antagonist PCA-4248 lowered the PAF level (most likely by depressing an autocrine loop) and neutrophil, CD68+ cell (monocyte/macrophage), and CD3+ T-cell accumulation in the skin and blocked progression of the psoriasis-like phenotype. This effect of PAF blockade was specific and similar to that of psoralen–UV-A and was paralleled by a decrease in abnormally elevated mRNA and/or protein levels of T-helper type 17 cell–related cytokines IL-17A, IL-17F, IL-23, IL-12A, and IL-6 and its transcription factor signal transducer and activator of transcription 3. In contrast, PCA-4248 treatment up-regulated mRNA levels of cyclooxygenase-2 and IL-10 in dorsal skin and release of IL-10 in serum and skin. Interfering with PAF may offer the opportunity to develop novel therapeutic strategies for inflammatory psoriasis and associated comorbidities, including metabolic syndrome and atherosclerosis, in which the IL-17 axis may be involved. PMID:21281802

  5. Learning from K-5 Teachers Who Think Aloud

    Science.gov (United States)

    Ness, Molly

    2016-01-01

    An essential element in teaching children to effectively comprehend text is the use of teacher-led think-alouds. The overarching objective of this study was to explore how to better prepare early career teachers to conduct think-alouds in their classrooms. Data from 31 teachers consisted of (1) questionnaires, (2) lesson plans, (3) lesson…

  6. Integration of Collaborative Learning in Grade K-5 EFL Classrooms

    Science.gov (United States)

    Shahamat, Ailar; Mede, Enisa

    2016-01-01

    This study investigated the effectiveness of integrating collaborative learning in Turkish elementary (primary) classrooms where English is acquired as a foreign language. Specifically, it aimed at shedding light on how the participating students and teachers perceive such language classes, what are the effects of integrating this particular…

  7. Integration of Collaborative Learning in Grade K-5 EFL Classrooms

    Science.gov (United States)

    Shahamat, Ailar; Mede, Enisa

    2016-01-01

    This study investigated the effectiveness of integrating collaborative learning in Turkish elementary (primary) classrooms where English is acquired as a foreign language. Specifically, it aimed at shedding light on how the participating students and teachers perceive such language classes, what are the effects of integrating this particular…

  8. Integrating the Performing Arts in Grades K-5

    Science.gov (United States)

    Rajan, Rekha S.

    2012-01-01

    Research documents that the arts boost learning, build confidence, and motivate students to participate in class. How do we keep the performing arts alive in this era of increased accountability and decreased funding? Rekha S. Rajan sets the stage for a creative and practical solution with detailed, concrete examples of how to integrate the…

  9. Isolation of β-Ag 3AsSe 3, (Me 3NH)[Ag 3As 2Se 5], K 5Ag 2As 3Se 9, and KAg 3As 2S 5: Novel Solid State Silver Thio- and Selenoarsenates from Solvento-thermal Synthesis

    Science.gov (United States)

    Kanatzidis, Mercouri G.; Chou, Jun-Hong

    1996-12-01

    Three new solid state silver selenoarsenates and one thioarsenate prepared from hydro- and methanothermal synthesis are described. β-Ag 3AsSe 3(I) and (Me 3NH)[Ag 3As 2Se 5] (II) were synthesized hydrothermally at 110°C from a mixture of AgBF 4/3K 3AsSe 3and AgBF 4/3K 3AsSe 3/6Me 3NHCl, while K 5[Ag 2As 3Se 9] (III) and K[Ag 3As 2S 5] (IV) were synthesized methanothermally at 110°C from a mixture of AgBF 4/3K 3AsS 3and AgBF 4/3K 3AsSe 3, respectively. β-Ag 3AsSe 3(I) crystallizes in the orthorhombic space group Pnma(No. 62) with a= 8.111(1) Å, b= 11.344(2) Å, c= 20.728(3) Å, Z= 8, V= 1907(1) Å 3. This compound is a new allotrope of α-Ag 3AsSe 3and has a complex three-dimensional structure composed of distorted trigonal planar and tetrahedral Ag +ions and [AsSe 3] 3-units. (Me 3NH)[Ag 3As 2Se 5] (II) crystallizes in the triclinic space group P- 1 (No. 2) with a= 10.119(2) Å, b= 18.010(4) Å, c= 14.932(3) Å, α = 110.20 (1)°, β = 103.98(2)°, γ = 99 99(1)°, Z= 2, V= 729.3(8) Å 3. The [Ag 3As 2Se 5] n- nanion in (II) has a complex two-dimensional layered structure with tetrahedral Ag +ions and [As 2Se 5] 4-units. K 5[Ag 2As 3Se 9] (III) crystallizes in the orthorhombic space group Pnma(No. 62) with a= 12.599(2) Å, b= 12.607(4) Å, c= 14.067(3) Å, Z= 8, V= 2234(1) Å 3. The [Ag 2As 3Se 9] 5n- nanion in (III) has a two-dimensional layered structure with tetrahedral Ag +ions and two different kinds of selenoarsenate units, [AsSe 4] 3-and [As 2Se 5] 4-. K[Ag 3As 2S 5] (IV) also crystallizes in the orthorhombic space group Pnma(No. 62) with a= 19.210(2) Å, b= 16.867(2) Å, c= 6.3491(7) Å, Z= 8, V= 2057.2(7) Å 3. The [Ag 3As 2S 5] n- nanion in (IV) possesses a complicated two-dimensional structure with tetrahedral Ag +ions and two kinds of thioarsenate ligands, [AsS 3] 3-and [As 3S 7] 5-. The thermal stability and optical absorption properties of these compounds are reported.

  10. International Space Station: K-5 Hands-on Science and Math Lesson Plans.

    Science.gov (United States)

    Boeing Co., Huntsville, AL.

    The Space Station is already capturing the imaginations of American students, encouraging them to pursue careers in the sciences. The idea of living and working in space continues to spark this renewed interest. The material in this guide was developed to provide hands-on experiences in science and math in the context of an International Space…

  11. Using GoNoodle to Introduce Health Concepts in the K-5 Classroom

    Science.gov (United States)

    Whitney, Elizabeth A.

    2016-01-01

    This article introduces readers to the GoNoodle platform for incorporating physical activity throughout the school day, and describes how one of the features, Ultimate Champ Training, can be used to teach health concepts in the elementary school classroom.

  12. Geoscience Outreach Activity Using Art to Understand Imprint Fossils Engaging K-5 Students

    Science.gov (United States)

    Derrick, E. R.

    2015-12-01

    In order to engage students in grades 3 through 5 in the geosciences, a hands on science activity was developed and implemented using art as a mechanism to gain knowledge of imprint fossils. The desired learning outcomes of this activity were for students to understand imprint fossils formation and how these fossils can be used to learn about past organisms. For more advanced students, an additional learning outcome was to understand how fossils provide information about depositional environments. Five graduate and undergraduate student volunteers presented imprint fossils and used a game to connect the fossils with the corresponding organisms. Students then made their own imprint fossils using modeling clay, plants, and plastic dinosaur skeletons. Of the 212 participating students, 95% (201) of students completed the hands on activity successfully and reported a knowledge gain in the formation and significance of imprint fossils. The activity was adapted to accommodate a diverse student population across grade and ability levels. Classroom teachers reported incorporating students' art into further classroom learning and requested this activity to be repeated the following year by the outreach group.

  13. K-5 mentor teachers' journeys toward reform-oriented science within a professional development school context

    Science.gov (United States)

    Manno, Jacqueline L.

    Reform-oriented science teaching with a specific focus on evidence and explanation provides a student-centered learning environment which encourages children to question, seek answers to those questions, experience phenomena, share ideas, and develop explanations of science concepts based on evidence. One of the ways schools have risen to meet the challenge of ever-increasing demands for success in science and all other curricular areas has been in the development of professional development schools (PDSs). Dedicated to the simultaneous renewal of schools and teacher education programs, the structure of a PDS plays a significant role in the change process. The purpose of this research study was to investigate the nature of change in mentor teachers' beliefs and pedagogical practices toward science teaching in the elementary school as conveyed through their own "stories of practice". The major research questions that guided the study were: (1) How do mentor teachers describe their science teaching practices and how have they changed as a result of participation in PDS? (a) In what ways do PDS mentor teachers' descriptions of practice reflect contemporary reform ideas and practices in science education? (b) To what extent do their stories emphasize technical aspects of teaching versus epistemological changes in their thinking and knowledge? (c) How is student learning in science reflected in teachers' stories of practice? (2) What is the relationship between the levels and types of involvement in PDS to change in thinking about and practices of teaching science? (3) What is the depth of commitment that mentors convey about changes in science teaching practices? Using case study design, the research explored the ways experienced teachers, working within the context of a PDS community, described changes in the ways they think about and teach science. The connection to the issue of change in teaching practices grew out of interest in understanding the relationship between mentor teachers' engagement in PDS activities and their thinking about classroom practice. The main focus of this research study was on change in science teaching within the context of a professional development school. PDS literature and current literature on the learning and teaching of science in grades K-8 provided a theoretical orientation to guide the research. Additionally, literature on the process of change in schools helped to narrow the focus of the study while using a lens of situated learning provided additional insight. Analysis of the interview data generated seven assertions that captured the nature of the change process of mentor teachers. Science-specific professional development as well as strong support and encouragement within an active community of learners played significant roles in the transformation of mentor teachers from traditional or activity-based science teachers into educators who use reform-oriented methods and a lens of evidence and explanation to guide their science teaching. Mentor teachers acknowledged an increase in student interest and excitement toward science as a result of these changes in science teaching practices. In addition, data revealed that mentor teachers remained committed to their changed practice after several years. By examining the change process of mentor teachers in a PDS environment, findings from this study are discussed based on implications regarding the factors that contribute to and affect change as reform-oriented practices are implemented in science, a curricular area that is often neglected by elementary teachers.

  14. The Atmospheric Dynamics of Alpha Tau (K5 III) -- Clues to Understanding the Magnetic Dynamo

    Science.gov (United States)

    Carpenter Kenneth G.

    2008-01-01

    Using HST/GHRS, HST/STIS and FUSE archival data for (alpha) Tau and the CHIANTI spectroscopic code, we have derived line shifts, volumetric emission measures, and plasma density estimates, and calculated filling factors for a number of UV lines forming between 10,000 K and 300,000 K in the outer atmosphere of this red giant star. The data suggest the presence of low-temperature extended regions and high-temperature compact regions, associated with magnetically open and closed structures in the stellar atmosphere, respectively. The signatures of UV lines from Alpha Tau can be consistently understood via a model of upward-traveling Alfven waves in a gravitationally stratified atmosphere. These wakes cause non-thermal broadening in UV lines due to unresolved wave motions and downward plasma motions in compact magnetic loops heated by resonant .4lf\\en wave heating. We discuss implications of this interpretation for understanding the nature of magnetic dynamos operating in late-type giants.

  15. Addressing K-5 Students' and Preservice Elementary Teachers' Conceptions of Seasonal Change

    Science.gov (United States)

    Starakis, Ioannis; Halkia, Krystallia

    2014-01-01

    In this paper, primary school students' and pre-service teachers' ideas of seasonal change are investigated. The research was carried out in nine primary schools in Athens and in the Primary Education Department of the University of Athens. Written reports were used for gathering data while students also had the opportunity to support their…

  16. A Comprehensive Evaluation of a K-5 Chinese Language Immersion Program

    Science.gov (United States)

    Jacobson, Shoufen

    2013-01-01

    This dissertation was designed to provide a comprehensive data-driven evaluation of a Chinese language Immersion Program (CIP) for the stakeholders. CIP was implemented in 2006 with a goal for students to become proficient in the Chinese language and develop increased cultural awareness while reaching at least the same level of academic…

  17. The decomposition of Kv into K2×K5's

    Institute of Scientific and Technical Information of China (English)

    Yang; LI; Jian-xing; YIN; Ru-cong; ZHANG; Gen-nian; GE

    2007-01-01

    The decomposition of the complete graph Kv into Kr×Kc's, the products of Kr and Kc,is originated from the use of DNA library screening. In this paper, we consider the case where r=2 and c = 5, and show that such a decomposition exists if and only if v ≡ 1 (mod 25).

  18. United Native Instruction To Youth. An Indian Studies Curriculum for Grades K-5 and 8-9.

    Science.gov (United States)

    Robeson County Compensatory Indian Education Project, Lumberton, NC.

    Focusing on the heritage of the 14 predominantly Indian communities in Robeson County, North Carolina, the curriculum guide covers: Indian families (kindergarten); how the Indians lived (first grade); Indian customs, traditions, superstitions (second grade); North Carolina's Indian heritage (third grade); community and government (fourth and fifth…

  19. Straight Talk about Risks: A Pre-K-12 Curriculum for Preventing Gun Violence. Grades Pre-K-5.

    Science.gov (United States)

    Center To Prevent Handgun Violence, Washington, DC.

    Straight Talk about Risks (STAR) is a pre-kindergarten through grade 12 curriculum designed to reduce the potential for children and teens to be injured or killed in gunfire. STAR is based on sound prevention practices developed from a pilot project in Dade County (Florida). The flexible format allows activities to fit into a 3-week classroom unit…

  20. Summary of the BIPM.RI(I)-K5 comparison for air kerma in 137Cs gamma radiation

    Science.gov (United States)

    Allisy-Roberts, P. J.; Kessler, C.; Burns, D. T.

    2013-01-01

    International comparisons of air kerma in 137Cs gamma radiation beams have been made at the Bureau International des Poids et Mesures (BIPM) since 1994. Twelve national metrology institutes have taken part, seven of which have repeated the comparison over the intervening years. The key comparison reference value (KCRV) is taken as the BIPM evaluation, each comparison result being the ratio of the national metrology institute (NMI) evaluation to that of the BIPM standard under the same reference conditions. The degrees of equivalence between each NMI and the KCRV and a graphical presentation are given using the most recent published result for eleven NMIs. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCRI, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

  1. Stellar Activity on the Young Suns of Orion: COUP Observations of K5-7 Pre-Main Sequence Stars

    CERN Document Server

    Wolk, S J; Micela, G; Favata, F; Glassgold, A E; Shang, H; Feigelson, E D

    2005-01-01

    In January 2003, the Chandra Orion Ultradeep Project (COUP) detected about 1400 young stars during a 13.2 day observation of the Orion Nebula Cluster (ONC). This paper studies a well-defined sample of 28 solar-mass COUP sources to characterize the magnetic activity of analogs of the young Sun and thereby to improve understanding of the effects of solar X-rays on the solar nebula during the era of planet formation. We find that active young Suns spend 70% of their time in a characteristic state with relatively constant flux and magnetically confined plasma with temperatures kT_2 = 2.1 * kT_1. During characteristic periods, the 0.5-8 keV X-ray luminosity is about 0.03% of the bolometric luminosity. One or two powerful flares per week with peak luminosities logL_x ~ 30-32 erg/s are typically superposed on this characteristic emission accompanied by heating of the hot plasma component from ~2.4 keV to ~7 keV at the flare peak. The energy distribution of flares superposed on the characteristic emission level follo...

  2. Assessing K-5 Teacher Leaders' Mathematical Understanding: What Have the Test Makers and the Test Takers Learned?

    Science.gov (United States)

    Ellington, Aimee J.; Whitenack, Joy W.; Inge, Vickie L.; Murray, Megan K.; Schneider, Patti J.

    2012-01-01

    This article describes the design and implementation of an assessment instrument for Numbers and Operations, the first course in a program to train elementary mathematics specialists. We briefly describe the course and its content, and then we elaborate on the process we used to develop the assessment instrument and the corresponding rubric for…

  3. Student Center Activities Aligned to the Common Core State Standards in English Language Arts and Literacy in History/Social Studies, Science, and Technical Subjects K-5

    Science.gov (United States)

    Verhagen, Connie

    2012-01-01

    This publication helps educators create differentiated reading instruction experiences for their students by showing the relationship between two distinct resources: Student Center Activities (SCAs) and the Common Core State Standards (CCSSs). Reading specialists, reading coaches, and teachers will find this document useful in lesson planning, as…

  4. EPR investigations of electron transfer in one-electron reduced a-1,4 K5[PV2W10O40].3H2O

    Indian Academy of Sciences (India)

    C M Varghese; A Shunmugasundaram; R Murugesan; T Jeyabalan

    2002-02-01

    Heteropoly blues of -1,2 and -1,4 isomers of [PV2W10O40]5- have been prepared by using the electrochemical technique. EPR spectra, measured as a function of temperature over a wide range (20-300 K), are explicable in terms of electronhopping processes in heteropoly blues. Temperature dependence of A||of the isomers suggest that the activation energy for electron hopping is greater for the -1,4 isomer than the -1,2 isomer. Other parameters like stability of the blues and intra-molecular electron transfer rate constants are also evaluated using EPR as the tool.

  5. Synthesis of [F-18]RGD-K5 by catalyzed [3+2] cycloaddition for imaging integrin alpha(v)beta(3) expression in vivo

    NARCIS (Netherlands)

    Mirfeizi, Leila; Walsh, Joe; Kolb, Hartmuth; Campbell-Verduyn, Lachlan; Dierckx, Rudi A.; Feringa, Ben L.; Elsinga, Philip H.; de Groot, Tjibbe; Sannen, Ivan; Bormans, Guy; Celen, Sofie

    2013-01-01

    In the last few years click chemistry reactions, and in particular copper-catalyzed cycloadditions have been used extensively for the preparation of new bioconjugated molecules such as F-18-radiolabeled radiopharmaceuticals for positron emission tomography (PET). This study is focused on the synthes

  6. Key comparison BIPM.RI(I)-K5 of the air kerma standards of the NIM, China, and the BIPM in 137Cs gamma radiation

    Science.gov (United States)

    Kessler, C.; Burns, D. T.; Li, D.; Wang, P.

    2015-01-01

    A direct comparison of the standards for air kerma of the National Institute of Metrology (NIM), Beijing, China, and of the Bureau International des Poids et Mesures (BIPM) was carried out in the 137Cs radiation beam of the BIPM in September 2014. The comparison result, evaluated as a ratio of the NIM and the BIPM standards for air kerma, is 0.9967 with a combined standard uncertainty of 2.1 × 10-3. The results are analysed and presented in terms of degrees of equivalence for entry in the BIPM key comparison database. Main text. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database kcdb.bipm.org/. The final report has been peer-reviewed and approved for publication by the CCRI, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA).

  7. Development of an enzyme-linked immunosorbent assay system for detecting β'-component (Onk k 5), a major IgE-binding protein in salmon roe.

    Science.gov (United States)

    Shimizu, Yutaka; Oda, Hiroshi; Seiki, Kohsuke; Saeki, Hiroki

    2015-08-15

    A novel enzyme-linked immunosorbent assay (ELISA) system has been established for selective detection of chum salmon (Oncorhynchus keta) yolk protein (SYP). Rabbit and rat polyclonal Immunoglobulin G antibodies to β'-component (the major allergic protein in fish roe; anti-β) were applied for designing the ELISA system. The sandwich ELISA using rabbit anti-β for the capture antibody and horseradish peroxidase-labeled F(ab')2 fragment of rat anti-β for the detection antibody obtained high sensitivity and narrow specificity for SYP. Protein extraction using sodium dodecyl sulfate and 2-mercaptoethanol ensured strict specificity of the ELISA, and components of three popular processed foods had no effect on the ELISA response. The limits of determination and quantification of SYP were estimated to be 0.78 μg/g and 2.60 μg/g of food sample, respectively. In conclusion, the developed ELISA system has a probability to be applied for the detection of contaminated chum salmon roe in processed food.

  8. ASK1 (MAP3K5 is transcriptionally upregulated by E2F1 in adipose tissue in obesity, molecularly defining a human dys-metabolic obese phenotype

    Directory of Open Access Journals (Sweden)

    Yulia Haim

    2017-07-01

    Conclusions: AT E2F1 –ASK1 molecularly defines a metabolically-detrimental obese sub-phenotype. Functionally, it may negatively affect AT endocrine function, linking AT stress to whole-body metabolic dysfunction.

  9. Effects of inorganic cations on K+-, 5-hydroxytryptamine- and noradrenaline-induced contractions of the isolated rat jugular vein and aorta

    NARCIS (Netherlands)

    Gouw, M.A.M.; Wilffert, B.; Van Zwieten, P.A.

    1990-01-01

    We investigated the inhibitory effects of 1 mM of the inorganic cations, La3+, Cd2+, Mn2+, Ni2+and Co2+on contractions induced by K+(100 mM) and 5-hydroxytryptamine (5-HT, 10-5M) in the isolated rat jugular vein and on contractions induced by K+(100 mM), 5-HT (10-5) and noradrenaline (NA, 10-5M) in

  10. The Atmospheric Dynamics of Alpha Tau (K5 III) - Clues to Understanding the Magnetic Dynamo in Late-Type Giant Stars

    Science.gov (United States)

    Carpenter, Kenneth G.; Airapetian, Vladimir

    2008-01-01

    Using HST/GHRS, HST/STIS and FUSE archival data for a Tau and the CHIANTI spectroscopic code, we have derived line shifts, volumetric emission measures, and plasma density estimates, and calculated filling factors for a number of UV lines forming between 10,000 K and 300,000 K in the outer atmosphere of this red giant star. The data suggest the presence of low-temperature extended regions and high-temperature compact regions, associated with magnetically open and closed structures in the stellar atmosphere, respectively. The signatures of UV lines from a Tau can be consistently understood via a model of upward-traveling Alfv6n waves in a gravitationally stratified atmosphere. These waves cause nonthermal broadening in UV lines due to unresolved wave motions and downward plasma motions in compact magnetic loops heated by resonant Alfven wave heating.

  11. Effect of the state of stress on the strain-induced martensite formation in 03Kh14N11K5M2YuT steel

    Science.gov (United States)

    Maltseva, L. A.; Loginov, Yu. N.; Maltseva, T. V.; Sharapova, V. A.

    2013-09-01

    The structural changes that occur in a metastable austenitic Fe-Cr-Ni-based steel during cold plastic deformation by drawing and tension are analyzed. A relation between the structure of the steel and its mechanical and magnetic properties is established. It is concluded that the stress state scheme considerably affects the rate of martensite formation.

  12. NCBI nr-aa BLAST: CBRC-CREM-01-1302 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CREM-01-1302 ref|YP_263931.1| possible acyltransferase family protein [Psychrobacter arctic...us 273-4] gb|AAZ18497.1| possible acyltransferase family protein [Psychrobacter arcticus 273-4] YP_263931.1 1e-80 52% ...

  13. NCBI nr-aa BLAST: CBRC-PHAM-01-0930 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PHAM-01-0930 ref|YP_264072.1| competence protein, ComEC [Psychrobacter arcticu...s 273-4] gb|AAZ18638.1| possible competence protein, ComEC [Psychrobacter arcticus 273-4] YP_264072.1 2.8 24% ...

  14. NCBI nr-aa BLAST: CBRC-PHAM-01-0080 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PHAM-01-0080 ref|YP_263547.1| hypothetical protein Psyc_0242 [Psychrobacter arctic...us 273-4] gb|AAZ18113.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] YP_263547.1 3.3 21% ...

  15. NCBI nr-aa BLAST: CBRC-PABE-13-0007 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PABE-13-0007 ref|YP_264072.1| possible competence protein, ComEC [Psychrobacter arctic...us 273-4] gb|AAZ18638.1| possible competence protein, ComEC [Psychrobacter arcticus 273-4] YP_264072.1 2.2 24% ...

  16. NCBI nr-aa BLAST: CBRC-SARA-01-1253 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-SARA-01-1253 ref|YP_264377.1| hypothetical protein Psyc_1092 [Psychrobacter arctic...us 273-4] gb|AAZ18943.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] YP_264377.1 1.2 25% ...

  17. NCBI nr-aa BLAST: CBRC-ACAR-01-1198 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-ACAR-01-1198 ref|YP_001280665.1| Pyrrolo-quinoline quinone [Psychrobacter sp. ...PRwf-1] gb|ABQ94715.1| Pyrrolo-quinoline quinone [Psychrobacter sp. PRwf-1] YP_001280665.1 6.8 30% ...

  18. Phylogenetic analysis of cultivable bacteria isolated from Arctic sea-ice

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Phylogenetic analysis based on 16S rDNA of 8 strains of cultivable bacteria isolated from Arctic sea-ice was studied. The results showed that strain BJ1 belonged to genus Planococcus, which was a genus of low mole percent G+C gram-positive bacteria; strain BJ6 belonged to genus Burkholderia of β- proteobacteria and the rest 6 strain all belonged to γ-proteobacteria, of which strain BJ8 was a species of Pseudoalteromonas, strain BJ2-BJ5 and BJ7 were members of genus Psychrobacter. Phylogenetic analysis also indicated that bacteria of genus Psychrobacter of the isolates formed a relatively independent phylogenetic cluster in comparison with other bacteria belonged to genus Psychrobacter.

  19. Dicty_cDB: Contig-U02385-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available d:none) Alkalilimnicola ehrlichii MLHE-... 33 7.3 CP000323_384( CP000323 |pid:none) Psychrobacter cryohalole...5.6 CP001145_892( CP001145 |pid:none) Coprothermobacter proteolyticus ... 33 7.3 CP000453_2000( CP000453 |pi

  20. Perlucidibaca piscinae gen. nov., sp. nov., a freshwater bacterium belonging to the family Moraxellaceae

    National Research Council Canada - National Science Library

    Song, Jaeho; Choo, Yoe-Jin; Cho, Jang-Cheon

    2008-01-01

    .... Based on 16S rRNA gene sequence similarity analyses, the novel strain was most closely related to the genera Alkanindiges (91.7 %), Acinetobacter (89.0–91.2 %), Moraxella (87.9–90.1 %), Psychrobacter (87.2–89.5 %) and Enhydrobacter (87.8...

  1. Dicty_cDB: Contig-U13521-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 614 |pid:none) Teredinibacter turnerae T7901, c... 42 0.014 CP000713_1352( CP000713 |pid:none) Psychrobacter... Vibrio cholerae M66-2 chromosom... 35 1.7 CP001614_2327( CP001614 |pid:none) Teredinibacter turner

  2. Dicty_cDB: Contig-U14871-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 956( CP000082 |pid:none) Psychrobacter arcticus 273-4, co... 101 3e-20 CP001277_1859( CP001277 |pid:none) Candidatus Hamiltonella def...ensa... 101 3e-20 (A4IYN5) RecName: Full=Ribose-5-phosphate isomerase A; ... 101 3e

  3. Metagenomic Sequencing for Detection of Non-Traditional Biological Agents: Synthetic Constructs, Genetically Modified Organisms, and Emerging Threats

    Science.gov (United States)

    2013-03-31

    Nesticus 1.22 Nocardiopsis 1.95 Ochrobactrum 3.73 Paenibacillus 0.45 0.17 Pantoea 1.27 0.35 0.23...Opitutus 0.02 Pantoea 0.06 Parabacteroides 0.02 Paracoccus 0.01 Phenylobacterium 0.08 Photorhabdus 0.02 Polaromonas 0.15 0.01 Psychrobacter

  4. The effect of dissolved organic carbon on bacterial adhesion to conditioning films adsorbed on glass from natural seawater collected during different seasons

    NARCIS (Netherlands)

    Bakker, D.P.; Klijnstra, J.W.; Busscher, H.J.; Mei, H.C. van der

    2003-01-01

    Adhesion of three marine bacterial strains, i.e. Marinobacter hydrocarbonoclasticus, Psychrobacter sp. and Halomonas pacifica with different cell surface hydrophobicities was measured on glass in a stagnation point flow chamber. Prior to bacterial adhesion, the glass surface was conditioned for 1 h

  5. Microorganism contamination investigation and bacterial diversity analysis of vacuum-packed salted goose during processing%真空包装盐水鹅加工过程中微生物污染状况与菌群多样性研究

    Institute of Scientific and Technical Information of China (English)

    董洋; 王虎虎; 闫振国; 徐幸莲; 周光宏

    2012-01-01

    利用传统平板培养结合聚合酶链式反应-变性梯度凝胶电泳(PCR-DGGE)的技术方法,对真空包装盐水鹅加工过程中微生物污染状况和菌群多样性进行了分析.结果表明:环境及产品表面微生物的数量和种类随加工工序和时间的不同而变化;解冻和分割是影响产品卫生质量的关键环节;原辅料携带的污染菌是加工过程中微生物污染的主要来源;环境、设备和产品之间的交叉污染及分割时的二次污染是产品表面微生物污染的主要途径;加工过程中主要微生物种类有:Leuconostoc lactis、Lactobacillus parabuchneri、Uncultured Psychrobacter sp.、Acinetobacter johnsonii、Shewanella baltica OS678、Pseudomonas fluorescens、Psychrobacter sp.、Macrococcus caseolyticus、Staphylococcus aureus、Psychrobacter sanguinis、Pseudomonas fragi、Weissella hellenica和Carnobacterium divergens,其均可能成为产品在贮藏期间的优势腐败菌,影响产品货架期.%Traditional plate culture and polymerase chain reaction-denaturing gradient gel electrophoresis( PCR-DGGK)methods were used to investigate the microorganism contamination and analyze the bacterial diversity in vacuum-packed salted goose during processing. The results showed that the microbial quantity and species in environment and products varied at different procedures during processing,the critical control point was thawing and dividing,and the initial microorganism in the raw materials was the major sources of contamination. The cross-contamination between air,equipment and products,and recontamination were important channels of contamination. The main bacteria in environment and products included Leuconostoc lactis, Lactobacillus parabuchneri, Uncultured Psychrobacter sp. , Acinetobacter johnsonii, Shewanella ballica OS678, Pseudomonas fluorescens, Psychrobacter sp. , Macrococcus caseolyticus,Staphylococcus aureus,Psychrobacter sanguinis,Pseudomonas fragi,Weissella hellenica

  6. Genetic structure and biological properties of the first ancient multiresistance plasmid pKLH80 isolated from a permafrost bacterium.

    Science.gov (United States)

    Petrova, Mayya; Kurakov, Anton; Shcherbatova, Natalya; Mindlin, Sofia

    2014-10-01

    A novel multidrug-resistance plasmid, pKLH80, previously isolated from Psychrobacter maritimus MR29-12 found in ancient permafrost, was completely sequenced and analysed. In our previous studies, we focused on the pKLH80 plasmid region containing streptomycin and tetracycline resistance genes, and their mobilization with an upstream-located ISPpy1 insertion sequence (IS) element. Here, we present the complete sequence of pKLH80 and analysis of its backbone genetic structure, including previously unknown features of the plasmid's accessory region, notably a novel variant of the β-lactamase gene blaRTG-6. Plasmid pKLH80 was found to be a circular 14 835 bp molecule that has an overall G+C content of 40.3 mol% and encodes 20 putative ORFs. There are two distinctive functional modules within the plasmid backbone sequence: (i) the replication module consisting of repB and the oriV region; and (ii) the mobilization module consisting of mobA, mobC and oriT. All of the aforementioned genes share sequence identities with corresponding genes of different species of Psychrobacter. The plasmid accessory region contains antibiotic resistance genes and IS elements (ISPsma1 of the IS982 family, and ISPpy1 and ISAba14 of the IS3 family) found in environmental and clinical bacterial strains of different taxa. We revealed that the sequences flanking blaRTG-6 and closely related genes from clinical bacteria are nearly identical. This fact suggests that blaRTG-6 from the environmental strain of Psychrobacter is a progenitor of blaRTG genes of clinical bacteria. We also showed that pKLH80 can replicate in different strains of Acinetobacter and Psychrobacter genera. The roles of IS elements in the horizontal transfer of antibiotic resistance genes are examined and discussed.

  7. Production of volatile aroma compounds by bacterial strains isolated from different surface-ripened French cheeses.

    Science.gov (United States)

    Deetae, Pawinee; Bonnarme, Pascal; Spinnler, Henry E; Helinck, Sandra

    2007-10-01

    Twelve bacterial strains belonging to eight taxonomic groups: Brevibacterium linens, Microbacterium foliorum, Arthrobacter arilaitensis, Staphylococcus cohnii, Staphylococcus equorum, Brachybacterium sp., Proteus vulgaris and Psychrobacter sp., isolated from different surface-ripened French cheeses, were investigated for their abilities to generate volatile aroma compounds. Out of 104 volatile compounds, 54 volatile compounds (identified using dynamic headspace technique coupled with gas chromatography-mass spectrometry [GC-MS]) appeared to be produced by the different bacteria on a casamino acid medium. Four out of eight species used in this study: B. linens, M. foliorum, P. vulgaris and Psychrobacter sp. showed a high flavouring potential. Among these four bacterial species, P. vulgaris had the greatest capacity to produce not only the widest varieties but also the highest quantities of volatile compounds having low olfactive thresholds such as sulphur compounds. Branched aldehydes, alcohols and esters were produced in large amounts by P. vulgaris and Psychrobacter sp. showing their capacity to breakdown the branched amino acids. This investigation shows that some common but rarely mentioned bacteria present on the surface of ripened cheeses could play a major role in cheese flavour formation and could be used to produce cheese flavours.

  8. AcEST: DK953371 [AcEST

    Lifescience Database Archive (English)

    Full Text Available ragment) OS=Brass... 36 1.7 tr|Q590K5|Q590K5_9ROSI Maturase K OS=Phragmotheca ecuador... 464 S+F + HGD Sbjct: 67 SLFVYLHGD 75 >tr|Q590K5|Q590K5_9ROSI Maturase K OS=Phragmotheca ecuador

  9. Denitrification characteristics of a marine origin psychrophilic aerobic denitrifying bacterium

    Institute of Scientific and Technical Information of China (English)

    Haiyan Zheng; Ying Liu; Guangdong Sun; Xiyan Gao; Qingling Zhang; Zhipei Liu

    2011-01-01

    A psychrophilic aerobic denitrifying bacterium,strain S1-1,was isolated from a biological aerated filter conducted for treatment of recirculating water in a marine aquaculture system.Strain S1-1 was preliminarily identified as Psychrobacter sp.based on the analysis of its 16S rRNA gene sequence,which showed 100% sequence similarity to that of Psychrobacter sp.TSBY-70.Strain S 1-1 grew well either in high nitrate or high nitrite conditions with a removal of 100% nitrate or 63.50% nitrite,and the total nitrogen removal rates could reach to 46.48% and 31.89%,respectively.The results indicated that nitrate was mainly reduced in its logarithmic growth phase with a very low leve 1 accumulation of nitrite,suggesting that the aerobic denitrification process of strain S l-1 occurred mainly in this phase.The GC-MS results showed that N2O was formed as the major intermediate during the aerobic denitrifying process of strain S1-1.Finally,factors affecting the growth of strain Sl-1 and its aerobic denitrifying ability were also investigated.Results showed that the optimum aerobic denitrification conditions for strain S1-1 were sodium succinate as carbon source,C/N ratio15,salinity 10 g/L NaCl,incubation temperature 20℃ and initial pH 6.5.

  10. Microbiota characterization of a Belgian protected designation of origin cheese, Herve cheese, using metagenomic analysis.

    Science.gov (United States)

    Delcenserie, V; Taminiau, B; Delhalle, L; Nezer, C; Doyen, P; Crevecoeur, S; Roussey, D; Korsak, N; Daube, G

    2014-10-01

    Herve cheese is a Belgian soft cheese with a washed rind, and is made from raw or pasteurized milk. The specific microbiota of this cheese has never previously been fully explored and the use of raw or pasteurized milk in addition to starters is assumed to affect the microbiota of the rind and the heart. The aim of the study was to analyze the bacterial microbiota of Herve cheese using classical microbiology and a metagenomic approach based on 16S ribosomal DNA pyrosequencing. Using classical microbiology, the total counts of bacteria were comparable for the 11 samples of tested raw and pasteurized milk cheeses, reaching almost 8 log cfu/g. Using the metagenomic approach, 207 different phylotypes were identified. The rind of both the raw and pasteurized milk cheeses was found to be highly diversified. However, 96.3 and 97.9% of the total microbiota of the raw milk and pasteurized cheese rind, respectively, were composed of species present in both types of cheese, such as Corynebacterium casei, Psychrobacter spp., Lactococcus lactis ssp. cremoris, Staphylococcus equorum, Vagococcus salmoninarum, and other species present at levels below 5%. Brevibacterium linens were present at low levels (0.5 and 1.6%, respectively) on the rind of both the raw and the pasteurized milk cheeses, even though this bacterium had been inoculated during the manufacturing process. Interestingly, Psychroflexus casei, also described as giving a red smear to Raclette-type cheese, was identified in small proportions in the composition of the rind of both the raw and pasteurized milk cheeses (0.17 and 0.5%, respectively). In the heart of the cheeses, the common species of bacteria reached more than 99%. The main species identified were Lactococcus lactis ssp. cremoris, Psychrobacter spp., and Staphylococcus equorum ssp. equorum. Interestingly, 93 phylotypes were present only in the raw milk cheeses and 29 only in the pasteurized milk cheeses, showing the high diversity of the microbiota

  11. AcEST: DK947543 [AcEST

    Lifescience Database Archive (English)

    Full Text Available -07 tr|Q5K5E6|Q5K5E6_9ASPA Ribosomal protein S13 OS=Blandfordia puni... 58 2e-07 tr|Q5K5E4|Q5K5E4_9LILI Ribosomal protein S13 OS=Luzu...riaga radica... 58 2e-07 tr|Q53IV4|Q53IV4_9ASPA Mitochondrial ribosomal protein RPS

  12. AcEST: BP916219 [AcEST

    Lifescience Database Archive (English)

    Full Text Available Q069K5|Q069K5_9SOLA Adenosylhomocysteinase OS=Nicotiana suave... 60 8e-08 tr|A8IXE0|A8IXE0_CHLRE Adenosylhom...5|Q069K5_9SOLA Adenosylhomocysteinase OS=Nicotiana suaveolens GN=SAHH PE=2 SV=1 Length = 485 Score = 60.1 bi

  13. LGR4 expressed in uterine epithelium is necessary for uterine gland development and contributes to decidualization in mice

    NARCIS (Netherlands)

    Sone, M.; Oyama, K.; Mohri, Y.; Hayashi, R.; Clevers, H.; Nishimori, K.

    2013-01-01

    In previous work we generated mice with a tissue specific ablation of a leucine-rich repeat containing G-protein-coupled receptor 4 (Lgr4) using the Keratin-5 (K5) Cre transgenic mouse strain (Lgr4(K5 KO)). Interestingly, the Lgr4(K5 KO) female mice were subfertile, and their embryos had impaired de

  14. IDENTIFIKASI BAKTERI DARI IKAN TONGKOL (Euthynnus affinis YANG DIPERDAGANGKAN DI PASAR IKAN KEDONGANAN BALI

    Directory of Open Access Journals (Sweden)

    Gusti Ayu Dianti Violentina

    2016-06-01

    Full Text Available Ikan tongkol (Euthynnus affinis merupakan ikan konsumsi yang disukai masyarakat.Pengetahuan tentang bakteri yang ditemukan pada tubuh ikan ini sangat penting untuk tujuan kesehatan masyarakat dan kajian biologi ikan.  Penelitian ini bertujuan untuk mengidentifikasi bakteri yang berasosiasi dengan ikan tersebut.Bakteri dari usus ikan diambil secara aseptis dan ditumbuhkan pada Blood Agar dan Nutrient Broth. DNA total dari kultur agar cair diisolasi dengan chelax, gen 16S RNA diamplifikasi dengan PCR menggunakan primer universal dengan produk sekitar 1300 bp. Produk PCR dirunut dengan metode Big-Dye termination. Hasilnya disepadankan dan dianalisis dengan MEGA 6.0. Pada penelitian ini, 14 spesies bakteri yang memiliki > 99% kesamaan dengan data GenBankteridentifikasi, yaitu Photobacterium leiognathi, Uruburuella testudinis, Aeromonas molluscorum, Psychrobacter celer, Psychrobacer faecalis, Acinetobacter johnsonii, Vibrio gallicus, Bacillus megaterium, Vagococcus fessus, Shewanella baltica, Shewanella algae, Rothia nasimurium, Myroides phaeus dan Yersinia ruckeri. Peran bakteribakteri tersebut dalam biologi ikan dan kesehatan masyarakat perlu dikaji lebih lanjut.

  15. Bacterial Diversity of Ny-Ålesund, Arctic Archipelago Svalbard

    Directory of Open Access Journals (Sweden)

    Battsetseg Choidash

    2012-12-01

    Full Text Available The bacterial diversity of the water sample, collected from Ny-Ålesund, Arctic Archipelago Svalbard was analyzed by a phenotypic as well as a genotypic approach. Pure colonies of the culturable bacteria were established and grown at a range of temperatures: 4ºC, 15ºC, 22ºC and 37ºC. Optimum growth was found at 15ºC, and around 28 colonies were obtained. The library was dominated by 16S rDNAs of Gram-negative bacteria ( γ -Proteobacteria. Twenty two isolates exhibited sequences were similar to that of known bacterial isolates (>97% sequence similarity, represented by the species of the genera Psychrobacter , Pseudomonas , and Acinetobacter . Six isolates exhibited sequences showed less affi liation with known taxa (<97% sequence similarity, and may represent novel taxa.

  16. Microbial succession of grass carp (Ctenopharyngodon idellus) filets during storage at 4°C and its contribution to biogenic amines' formation.

    Science.gov (United States)

    Wang, Hang; Luo, Yongkang; Huang, Heping; Xu, Qian

    2014-11-03

    Investigation on the microbial succession of grass carp filets during storage at 4°C was carried out. For identification, 16S rRNA genes of the isolated pure strains were sequenced and analyzed. Acinetobacter was dominant in fresh grass carp. Species from the genera Brevundimonas, Empedobacter, Pseudomonas, Microbacterium, Flavobacterium, Moraxella, Shewanella and Soonwooa were also detected at the initial day. The communities were dominated by Aeromonas and Acinetobacter after 6days. Aeromonas followed by Pseudomonas was the predominant genera at the end of shelf-life of grass carp, while other genera such as Shewanella, Acinetobacter, Flavobacteriaceae and Psychrobacter were present in smaller numbers. We investigated biogenic amines' (BAs) production by six strains isolated from spoiled grass carp filets. Shewanella putrefaciens showed significantly higher abilities to produce putrescine, than those from other genera. Aeromonas veronii revealed a strong ability to produce putrescine and cadaverine. However, Pseudomonas and Acinetobacter showed little ability to produce BAs.

  17. Isolation of Aureimonas altamirensis, a Brucella canis-like bacterium, from an edematous canine testicle.

    Science.gov (United States)

    Reilly, Thomas J; Calcutt, Michael J; Wennerdahl, Laura A; Williams, Fred; Evans, Tim J; Ganjam, Irene K; Bowman, Jesse W; Fales, William H

    2014-11-01

    Microbiological and histological analysis of a sample from a swollen testicle of a 2-year-old Border Collie dog revealed a mixed infection of the fungus Blastomyces dermatitidis and the Gram-negative bacterium Aureimonas altamirensis. When subjected to an automated microbial identification system, the latter isolate was provisionally identified as Psychrobacter phenylpyruvicus, but the organism shared several biochemical features with Brucella canis and exhibited agglutination, albeit weakly, with anti-B. canis antiserum. Unequivocal identification of the organism was only achieved by 16S ribosomal RNA gene sequencing, ultimately establishing the identity as A. altamirensis. Since its first description in 2006, this organism has been isolated infrequently from human clinical samples, but, to the authors' knowledge, has not been reported from a veterinary clinical sample. While of unknown clinical significance with respect to the pathology observed for the polymicrobial infection described herein, it highlights the critical importance to unambiguously identify the microbe for diagnostic, epidemiological, infection control, and public health purposes.

  18. Cold-active halophilic bacteria from the ice-sealed Lake Vida, Antarctica.

    Science.gov (United States)

    Mondino, Lindsay J; Asao, Marie; Madigan, Michael T

    2009-10-01

    Lake Vida is a large, permanently ice-covered lake in the Victoria Valley of the McMurdo Dry Valleys, Antarctica and is unique among Dry Valley lakes because it is ice-sealed, with an ice-cover of nearly 19 m. Enrichment cultures of melt-water from Lake Vida 15.9 m ice yielded five pure cultures of aerobic, heterotrophic bacteria. Of these, one strain grew at -8 degrees C and the four others at -4 degrees C. All isolates were either halotolerant or halophilic, with two strains capable of growth at 15% NaCl. Phylogenetic analysis revealed the Lake Vida isolates to be Gammaproteobacteria, related to species of Psychrobacter and Marinobacter. This is the first report of pure cultures of bacteria from Lake Vida, and the isolates displayed a phenotype consistent with life in a cold hypersaline environment.

  19. Screening, Molecular Identification and Adaptability Exploration of Antarctic Microbial Flocculant-Producing Bacteria%南极微生物絮凝剂产生菌的筛选、分子鉴定及适应性研究

    Institute of Scientific and Technical Information of China (English)

    杜宁

    2012-01-01

    Seven microbial flocculant-producing bacteria were separated from antarctic seawater,sea ice and marine sediment. The molecular identification of these bacteria was by the way of 16S rRNA gene sequence amplification. Phylogenetic analysis showed that they belonged to Acinetobacter,Arthrobacter,Psychrobacter,Ser-ratia,Pseudomonas and Pseudoalteromonas, respectively. Different carbon sources and nitrogen sources were used to culture the bacteria in order to observe the change of flocculation activity. The bacteria, 1-2 and P2-13-1, were of universal adaptability to different carbon sources and nitrogen sources and had higher flocculation activity in economic culture medium.%从南极海水、海冰、底泥中分离得到7株产絮凝剂的菌株,通过16S rRNA基因序列扩增方法进行分子鉴定,分别隶属于不动杆菌属(Acinetobacter)、节杆菌属(Arthrobacter)、嗜冷杆菌属(Psychrobacter)、沙雷菌属(Serratia)、假单胞菌属(Pseudomonas)和假交替单胞菌属(Pseudoa lteromonas).改变培养基中碳源和氮源的组成并观察絮凝率的变化,筛选出在经济培养基条件下具有较高絮凝活性、同时对碳源和氮源具有普适性的菌株I-2和P2-13-1.

  20. Arsenite-oxidizing and arsenate-reducing bacteria associated with arsenic-rich groundwater in Taiwan

    Science.gov (United States)

    Liao, Vivian Hsiu-Chuan; Chu, Yu-Ju; Su, Yu-Chen; Hsiao, Sung-Yun; Wei, Chia-Cheng; Liu, Chen-Wuing; Liao, Chung-Min; Shen, Wei-Chiang; Chang, Fi-John

    2011-04-01

    Drinking highly arsenic-contaminated groundwater is a likely cause of blackfoot disease in Taiwan, but microorganisms that potentially control arsenic mobility in the subsurface remain unstudied. The objective of this study was to investigate the relevant arsenite-oxidizing and arsenate-reducing microbial community that exists in highly arsenic-contaminated groundwater in Taiwan. We cultured and identified arsenic-transforming bacteria, analyzed arsenic resistance and transformation, and determined the presence of genetic markers for arsenic transformation. In total, 11 arsenic-transforming bacterial strains with different colony morphologies and varying arsenic transformation abilities were isolated, including 10 facultative anaerobic arsenate-reducing bacteria and one strictly aerobic arsenite-oxidizing bacterium. All of the isolates exhibited high levels of arsenic resistance with minimum inhibitory concentrations of arsenic ranging from 2 to 200 mM. Strain AR-11 was able to rapidly oxidize arsenite to arsenate at concentrations relevant to environmental groundwater samples without the addition of any electron donors or acceptors. We provide evidence that arsenic-reduction activity may be conferred by the ars operon(s) that were not amplified by the designed primers currently in use. The 16S rRNA sequence analysis grouped the isolates into the following genera: Pseudomonas, Bacillus, Psychrobacter, Vibrio, Citrobacter, Enterobacter, and Bosea. Among these genera, we present the first report of the genus Psychrobacter being involved in arsenic reduction. Our results further support the hypothesis that bacteria capable of either oxidizing arsenite or reducing arsenate coexist and are ubiquitous in arsenic-contaminated groundwater.

  1. Structure and function of the first full-length murein peptide ligase (Mpl cell wall recycling protein.

    Directory of Open Access Journals (Sweden)

    Debanu Das

    Full Text Available Bacterial cell walls contain peptidoglycan, an essential polymer made by enzymes in the Mur pathway. These proteins are specific to bacteria, which make them targets for drug discovery. MurC, MurD, MurE and MurF catalyze the synthesis of the peptidoglycan precursor UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-diaminopimelyl-D-alanyl-D-alanine by the sequential addition of amino acids onto UDP-N-acetylmuramic acid (UDP-MurNAc. MurC-F enzymes have been extensively studied by biochemistry and X-ray crystallography. In gram-negative bacteria, ∼30-60% of the bacterial cell wall is recycled during each generation. Part of this recycling process involves the murein peptide ligase (Mpl, which attaches the breakdown product, the tripeptide L-alanyl-γ-D-glutamyl-meso-diaminopimelate, to UDP-MurNAc. We present the crystal structure at 1.65 Å resolution of a full-length Mpl from the permafrost bacterium Psychrobacter arcticus 273-4 (PaMpl. Although the Mpl structure has similarities to Mur enzymes, it has unique sequence and structure features that are likely related to its role in cell wall recycling, a function that differentiates it from the MurC-F enzymes. We have analyzed the sequence-structure relationships that are unique to Mpl proteins and compared them to MurC-F ligases. We have also characterized the biochemical properties of this enzyme (optimal temperature, pH and magnesium binding profiles and kinetic parameters. Although the structure does not contain any bound substrates, we have identified ∼30 residues that are likely to be important for recognition of the tripeptide and UDP-MurNAc substrates, as well as features that are unique to Psychrobacter Mpl proteins. These results provide the basis for future mutational studies for more extensive function characterization of the Mpl sequence-structure relationships.

  2. Characterization of geographically distinct bacterial communities associated with coral mucus produced by Acropora spp. and Porites spp.

    Science.gov (United States)

    McKew, B A; Dumbrell, A J; Daud, S D; Hepburn, L; Thorpe, E; Mogensen, L; Whitby, C

    2012-08-01

    Acropora and Porites corals are important reef builders in the Indo-Pacific and Caribbean. Bacteria associated with mucus produced by Porites spp. and Acropora spp. from Caribbean (Punta Maroma, Mexico) and Indo-Pacific (Hoga and Sampela, Indonesia) reefs were determined. Analysis of pyrosequencing libraries showed that bacterial communities from Caribbean corals were significantly more diverse (H', 3.18 to 4.25) than their Indonesian counterparts (H', 2.54 to 3.25). Dominant taxa were Gammaproteobacteria, Alphaproteobacteria, Firmicutes, and Cyanobacteria, which varied in relative abundance between coral genera and region. Distinct coral host-specific communities were also found; for example, Clostridiales were dominant on Acropora spp. (at Hoga and the Mexican Caribbean) compared to Porites spp. and seawater. Within the Gammproteobacteria, Halomonas spp. dominated sequence libraries from Porites spp. (49%) and Acropora spp. (5.6%) from the Mexican Caribbean, compared to the corresponding Indonesian coral libraries (<2%). Interestingly, with the exception of Porites spp. from the Mexican Caribbean, there was also a ubiquity of Psychrobacter spp., which dominated Acropora and Porites libraries from Indonesia and Acropora libraries from the Caribbean. In conclusion, there was a dominance of Halomonas spp. (associated with Acropora and Porites [Mexican Caribbean]), Firmicutes (associated with Acropora [Mexican Caribbean] and with Acropora and Porites [Hoga]), and Cyanobacteria (associated with Acropora and Porites [Hoga] and Porites [Sampela]). This is also the first report describing geographically distinct Psychrobacter spp. associated with coral mucus. In addition, the predominance of Clostridiales associated with Acropora spp. provided additional evidence for coral host-specific microorganisms.

  3. The Dominant Spoilage Bacteria and Their Growth and Decline Law in Grass Carp During Low Temperature Preservation%低温贮藏下草鱼肉优势腐败菌鉴定及其消长规律

    Institute of Scientific and Technical Information of China (English)

    王发祥; 王满生; 刘永乐; 晏志萍; 俞健; 李向红; 王建辉

    2012-01-01

    The growth of special spoilage bacteria always plays the key roles on spoilage of the fresh-water fish products. In this study, spoilage bacteria in grass carp during 4% temperature preservation for 6 d were separated by dilution-plate method. Dominant spoilage bacteria were identified using BIOLOG micro-station and the law of their growth and delination was drawn. The results showed the four dominant spoilage bacteria in grass carp during low temperature preservation were Buttiauxella gaviniae, Pseudomonas fragi, Brochothrix thermosphacta and Psychrobacter immobilis; during the cold storage, except Psychrobacter immobili whose colony-form unit was increased all along, the other three bacteria all needed an adaptive phase before the slowdown of their increase set in.%通过稀释平板法对4℃条件贮藏6d的草鱼肉的腐败菌进行分离,再以微生物鉴定系统对优势腐败菌进行鉴定,并分析了其消长规律。结果表明,草鱼肉冷藏过程中的优势腐败菌主要为乡间布丘氏菌(Buttiauxella gaviniae)、草莓假单胞菌(Pseudomonasfragi)、热杀索丝菌(Brochothrixthermosphacta)、静止嗜冷杆菌(Psychrobact—erimmobilis)。而且在整个冷藏过程中,除静止嗜冷杆菌数量一直增长外,其余3种腐败菌都需经过一定的适应期后才开始缓慢增长。

  4. Microbial background flora in small-scale cheese production facilities does not inhibit growth and surface attachment of Listeria monocytogenes.

    Science.gov (United States)

    Schirmer, B C T; Heir, E; Møretrø, T; Skaar, I; Langsrud, S

    2013-10-01

    The background microbiota of 5 Norwegian small-scale cheese production sites was examined and the effect of the isolated strains on the growth and survival of Listeria monocytogenes was investigated. Samples were taken from the air, food contact surfaces (storage surfaces, cheese molds, and brine) and noncontact surfaces (floor, drains, and doors) and all isolates were identified by sequencing and morphology (mold). A total of 1,314 isolates were identified and found to belong to 55 bacterial genera, 1 species of yeast, and 6 species of mold. Lactococcus spp. (all of which were Lactococcus lactis), Staphylococcus spp., Microbacterium spp., and Psychrobacter sp. were isolated from all 5 sites and Rhodococcus spp. and Chryseobacterium spp. from 4 sites. Thirty-two genera were only found in 1 out of 5 facilities each. Great variations were observed in the microbial background flora both between the 5 producers, and also within the various production sites. The greatest diversity of bacteria was found in drains and on rubber seals of doors. The flora on cheese storage shelves and in salt brines was less varied. A total of 62 bacterial isolates and 1 yeast isolate were tested for antilisterial activity in an overlay assay and a spot-on-lawn assay, but none showed significant inhibitory effects. Listeria monocytogenes was also co-cultured on ceramic tiles with bacteria dominating in the cheese production plants: Lactococcus lactis, Pseudomonas putida, Staphylococcus equorum, Rhodococcus spp., or Psychrobacter spp. None of the tested isolates altered the survival of L. monocytogenes on ceramic tiles. The conclusion of the study was that no common background flora exists in cheese production environments. None of the tested isolates inhibited the growth of L. monocytogenes. Hence, this study does not support the hypothesis that the natural background flora in cheese production environments inhibits the growth or survival of L. monocytogenes.

  5. Evaluation of Freeze-Dried Kefir Coculture as Starter in Feta-Type Cheese Production

    Science.gov (United States)

    Kourkoutas, Y.; Kandylis, P.; Panas, P.; Dooley, J. S. G.; Nigam, P.; Koutinas, A. A.

    2006-01-01

    The use of freeze-dried kefir coculture as a starter in the production of feta-type cheese was investigated. Maturation of the produced cheese at 4°C was monitored for up to 70 days, and the effects of the starter culture, the salting method, and the ripening process on quality characteristics were studied. The use of kefir coculture as a starter led to increased lactic acid concentrations and decreased pH values in the final product associated with significantly higher conversion rates compared to salted rennet cheese. Determination of bacterial diversity at the end of the ripening process in salted kefir and rennet cheeses by denaturing gradient gel electrophoresis technology, based on both DNA and RNA analyses, suggested a potential species-specific inhibition of members of the genera Staphylococcus and Psychrobacter by kefir coculture. The main active microbial associations in salted kefir cheese appeared to be members of the genera Pseudomonas and Lactococcus, while in salted rennet cheese, Oxalobacteraceae, Janthinobacterium, Psychrobacter, and Pseudomonas species were noted. The effect of the starter culture on the production of aroma-related compounds responsible for cheese flavor was also studied by the solid-phase microextraction-gas chromatography-mass spectrometry technique. Kefir coculture also appeared to extend the shelf life of unsalted cheese. Spoilage of kefir cheese was observed on the 9th and 20th days of preservation at 10 and 5°C, respectively, while spoilage in the corresponding rennet cheese was detected on the 7th and 16th days. Microbial counts during preservation of both types of unsalted cheese increased steadily and reached similar levels, with the exception of staphylococci, which were significantly lower in unsalted kefir cheese. All types of cheese produced with kefir as a starter were approved and accepted by the panel during the preliminary sensory evaluation compared to commercial feta-type cheese. PMID:16957238

  6. The microbiota of water buffalo milk during mastitis

    Science.gov (United States)

    Catozzi, Carlotta; Sanchez Bonastre, Armand; Francino, Olga; Lecchi, Cristina; De Carlo, Esterina; Vecchio, Domenico; Martucciello, Alessandra; Fraulo, Pasquale; Bronzo, Valerio; Cuscó, Anna; D’Andreano, Sara

    2017-01-01

    The aim of this study was to define the microbiota of water buffalo milk during sub-clinical and clinical mastitis, as compared to healthy status, by using high-throughput sequencing of the 16S rRNA gene. A total of 137 quarter samples were included in the experimental design: 27 samples derived from healthy, culture negative quarters, with a Somatic Cell Count (SCC) of less than 200,000 cells/ml; 27 samples from quarters with clinical mastitis; 83 samples were collected from quarters with subclinical mastitis, with a SCC number greater of 200,000 cells/ml and/or culture positive for udder pathogens, without clinical signs of mastitis. Bacterial DNA was purified and the 16S rRNA genes were individually amplified and sequenced. Significant differences were found in milk samples from healthy quarters and those with sub-clinical and clinical mastitis. The microbiota diversity of milk from healthy quarters was richer as compared to samples with sub-clinical mastitis, whose microbiota diversity was in turn richer as compared to those from clinical mastitis. The core microbiota of water buffalo milk, defined as the asset of microorganisms shared by all healthy milk samples, includes 15 genera, namely Micrococcus, Propionibacterium, 5-7N15, Solibacillus, Staphylococcus, Aerococcus, Facklamia, Trichococcus, Turicibacter, 02d06, SMB53, Clostridium, Acinetobacter, Psychrobacter and Pseudomonas. Only two genera (Acinetobacter and Pseudomonas) were present in all the samples from sub-clinical mastitis, and no genus was shared across all in clinical mastitis milk samples. The presence of mastitis was found to be related to the change in the relative abundance of genera, such as Psychrobacter, whose relative abundance decreased from 16.26% in the milk samples from healthy quarters to 3.2% in clinical mastitis. Other genera, such as SMB53 and Solibacillus, were decreased as well. Discriminant analysis presents the evidence that the microbial community of healthy and clinical

  7. Overlap of Spoilage-Associated Microbiota between Meat and the Meat Processing Environment in Small-Scale and Large-Scale Retail Distributions.

    Science.gov (United States)

    Stellato, Giuseppina; La Storia, Antonietta; De Filippis, Francesca; Borriello, Giorgia; Villani, Francesco; Ercolini, Danilo

    2016-07-01

    Microbial contamination in food processing plants can play a fundamental role in food quality and safety. The aims of this study were to learn more about the possible influence of the meat processing environment on initial fresh meat contamination and to investigate the differences between small-scale retail distribution (SD) and large-scale retail distribution (LD) facilities. Samples were collected from butcheries (n = 20), including LD (n = 10) and SD (n = 10) facilities, over two sampling campaigns. Samples included fresh beef and pork cuts and swab samples from the knife, the chopping board, and the butcher's hand. The microbiota of both meat samples and environmental swabs were very complex, including more than 800 operational taxonomic units (OTUs) collapsed at the species level. The 16S rRNA sequencing analysis showed that core microbiota were shared by 80% of the samples and included Pseudomonas spp., Streptococcus spp., Brochothrix spp., Psychrobacter spp., and Acinetobacter spp. Hierarchical clustering of the samples based on the microbiota showed a certain separation between meat and environmental samples, with higher levels of Proteobacteria in meat. In particular, levels of Pseudomonas and several Enterobacteriaceae members were significantly higher in meat samples, while Brochothrix, Staphylococcus, lactic acid bacteria, and Psychrobacter prevailed in environmental swab samples. Consistent clustering was also observed when metabolic activities were considered by predictive metagenomic analysis of the samples. An increase in carbohydrate metabolism was predicted for the environmental swabs and was consistently linked to Firmicutes, while increases in pathways related to amino acid and lipid metabolism were predicted for the meat samples and were positively correlated with Proteobacteria Our results highlighted the importance of the processing environment in contributing to the initial microbial levels of meat and clearly showed that the type of retail

  8. Expression of basal cell keratins in human prostate cancer metastases and cell lines.

    NARCIS (Netherlands)

    Leenders, G.J.L.H. van; Aalders, M.W.; Hulsbergen-van de Kaa, C.A.; Ruiter, D.J.; Schalken, J.A.

    2001-01-01

    Within normal human prostate epithelium, basal and luminal cells can be discriminated by their expression of keratins (K). While basal cells express K5/14, luminal cells show expression of K8/18 and an intermediate cell population can be identified by co-expression of K5/18. Prostate cancer is predo

  9. Dual inhibition of plasminogen kringle 5 on angiogenesis and chemotaxis suppresses tumor metastasis by targeting HIF-1α pathway.

    Directory of Open Access Journals (Sweden)

    Wei-Bin Cai

    Full Text Available We had demonstrated that plasminogen kringle 5 (K5, a potent angiogenic inhibitor, inhibited retinal neovascularization and hepatocellular carcinoma growth by anti-angiogenesis. The current study investigated the effects and the underlying mechanisms of K5 on both tumor growth and spontaneous pulmonary metastasis in Lewis lung carcinoma (LLC implanted mouse model. Similarly, K5 could decrease expression of VEGF in LLC cells and grafted tissues and suppress tumor angiogenesis and growth. K5 had no direct effect on proliferation and apoptosis of LLC. However, K5 could significantly inhibit SDF-1α-induced chemotaxis movement of LLC cells and resulted in a great reduction of surface metastatic nodules and micrometastases in the lungs of LLC tumor-bearing mice. K5 also decreased expression of chemokine (C-X-C motif receptor 4 (CXCR4 in LLC cells and grafted tissues. Furthermore, K5 down-regulated SDF-1α expression in metastatic lung tissues of LLC-bearing mice. Therefore, K5 may suppress tumor pulmonary metastasis through inhibiting SDF-1α-CXCR4 chemotaxis movement and down-regulation of VEGF. Moreover, the role of hypoxia inducible factor-1α (HIF-1α, a crucial transcriptional factor for both VEGF and CXCR4 expression, was evaluated. The siRNA of HIF-1α attenuated expression of VEGF and CXCR4 and inhibited LLC migration. K5 decreased HIF-1α protein level and impaired nuclear HIF-1α accumulation. These results showed for the first time that K5 inhibits LLC growth and metastasis via the dual effects of anti-angiogenesis and suppression of tumor cell motility by targeting the pivotal molecule, HIF-1α.

  10. Cdk2 deficiency decreases ras/CDK4-dependent malignant progression, but not myc-induced tumorigenesis.

    Science.gov (United States)

    Macias, Everardo; Kim, Yongbaek; Miliani de Marval, Paula L; Klein-Szanto, Andres; Rodriguez-Puebla, Marcelo L

    2007-10-15

    We have previously shown that forced expression of CDK4 in mouse skin (K5CDK4 mice) results in increased susceptibility to squamous cell carcinoma (SCC) development in a chemical carcinogenesis protocol. This protocol induces skin papilloma development, causing a selection of cells bearing activating Ha-ras mutations. We have also shown that myc-induced epidermal proliferation and oral tumorigenesis (K5Myc mice) depends on CDK4 expression. Biochemical analysis of K5CDK4 and K5Myc epidermis as well as skin tumors showed that keratinocyte proliferation is mediated by CDK4 sequestration of p27Kip1 and p21Cip1, and activation of CDK2. Here, we studied the role of CDK2 in epithelial tumorigenesis. In normal skin, loss of CDK2 rescues CDK4-induced, but not myc-induced epidermal hyperproliferation. Ablation of CDK2 in K5CDK4 mice results in decreased incidences and multiplicity of skin tumors as well as malignant progression to SCC. Histopathologic analysis showed that K5CDK4 tumors are drastically more aggressive than K5CDK4/CDK2-/- tumors. On the other hand, we show that CDK2 is dispensable for myc-induced tumorigenesis. In contrast to our previous report of K5Myc/CDK4-/-, K5Myc/CDK2-/- mice developed oral tumors with the same frequency as K5Myc mice. Overall, we have established that ras-induced tumors are more susceptible to CDK2 ablation than myc-induced tumors, suggesting that the efficacy of targeting CDK2 in tumor development and malignant progression is dependent on the oncogenic pathway involved.

  11. Serpentine bacteria influence metal translocation and bioconcentration of Brassica juncea and Ricinus communis grown in multi-metal polluted soils.

    Science.gov (United States)

    Ma, Ying; Rajkumar, Mani; Rocha, Inês; Oliveira, Rui S; Freitas, Helena

    2014-01-01

    The aim of this study was to assess the effects of inoculation of rhizosphere or endophytic bacteria (Psychrobacter sp. SRS8 and Pseudomonas sp. A3R3, respectively) isolated from a serpentine environment on the plant growth and the translocation and accumulation of Ni, Zn, and Fe by Brassica juncea and Ricinus communis on a multi-metal polluted serpentine soil (SS). Field collected SS was diluted to 0, 25, 50, and 75% with pristine soil in order to obtain a range of heavy metal concentrations and used in microcosm experiments. Regardless of inoculation with bacteria, the biomass of both plant species decreased with increase of the proportion of SS. Inoculation of plants with bacteria significantly increased the plant biomass and the heavy metal accumulation compared with non-inoculated control in the presence of different proportion of SS, which was attributed to the production of plant growth promoting and/or metal mobilizing metabolites by bacteria. However, SRS8 showed a maximum increase in the biomass of the test plants grown even in the treatment of 75% SS. In turn, A3R3 showed maximum effects on the accumulation of heavy metals in both plants. Regardless of inoculation of bacteria and proportion of SS, both plant species exhibited low values of bioconcentration factor (communis in SS soils and have a great potential to be used as inoculants in phytostabilization scenarios of multi-metal contaminated soils.

  12. Culturable heterotrophic bacteria from Potter Cove, Antarctica, and their hydrolytic enzymes production

    Directory of Open Access Journals (Sweden)

    Mauro Tropeano

    2012-12-01

    Full Text Available Affiliations of the dominant culturable bacteria isolated from Potter Cove, South Shetland Islands, Antarctica, were investigated together with their production of cold-active hydrolytic enzymes. A total of 189 aerobic heterotrophic bacterial isolates were obtained at 4°C and sorted into 63 phylotypes based on their amplified ribosomal DNA restriction analysis profiles. The sequencing of the 16S rRNA genes of representatives from each phylotype showed that the isolates belong to the phyla Proteobacteria (classes Alpha- and Gamma-proteobacteria, Bacteroidetes (class Flavobacteria, Actinobacteria (class Actinobacteria and Firmicutes (class Bacilli. The predominant culturable group in the site studied belongs to the class Gammaproteobacteria, with 65 isolates affiliated to the genus Pseudoalteromonas and 58 to Psychrobacter. Among the 189 isolates screened, producers of amylases (9.5%, pectinases (22.8%, cellulases (14.8%, CM-cellulases (25.4%, xylanases (20.1% and proteases (44.4% were detected. More than 25% of the isolates produced at least one extracellular enzyme, with some of them producing up to six of the tested extracellular enzymatic activities. These results suggest that a high culturable bacterial diversity is present in Potter Cove and that this place represents a promising source of biomolecules.

  13. Bacterial responses to fluctuations and extremes in temperature and brine salinity at the surface of Arctic winter sea ice.

    Science.gov (United States)

    Ewert, Marcela; Deming, Jody W

    2014-08-01

    Wintertime measurements near Barrow, Alaska, showed that bacteria near the surface of first-year sea ice and in overlying saline snow experience more extreme temperatures and salinities, and wider fluctuations in both parameters, than bacteria deeper in the ice. To examine impacts of such conditions on bacterial survival, two Arctic isolates with different environmental tolerances were subjected to winter-freezing conditions, with and without the presence of organic solutes involved in osmoprotection: proline, choline, or glycine betaine. Obligate psychrophile Colwellia psychrerythraea strain 34H suffered cell losses under all treatments, with maximal loss after 15-day exposure to temperatures fluctuating between -7 and -25 °C. Osmoprotectants significantly reduced the losses, implying that salinity rather than temperature extremes presents the greater stress for this organism. In contrast, psychrotolerant Psychrobacter sp. strain 7E underwent miniaturization and fragmentation under both fluctuating and stable-freezing conditions, with cell numbers increasing in most cases, implying a different survival strategy that may include enhanced dispersal. Thus, the composition and abundance of the bacterial community that survives in winter sea ice may depend on the extent to which overlying snow buffers against extreme temperature and salinity conditions and on the availability of solutes that mitigate osmotic shock, especially during melting.

  14. Microbial community in high arsenic shallow groundwater aquifers in Hetao Basin of Inner Mongolia, China.

    Science.gov (United States)

    Li, Ping; Wang, Yanhong; Dai, Xinyue; Zhang, Rui; Jiang, Zhou; Jiang, Dawei; Wang, Shang; Jiang, Hongchen; Wang, Yanxin; Dong, Hailiang

    2015-01-01

    A survey was carried out on the microbial community of 20 groundwater samples (4 low and 16 high arsenic groundwater) and 19 sediments from three boreholes (two high arsenic and one low arsenic boreholes) in a high arsenic groundwater system located in Hetao Basin, Inner Mongolia, using the 454 pyrosequencing approach. A total of 233,704 sequence reads were obtained and classified into 12-267 operational taxonomic units (OTUs). Groundwater and sediment samples were divided into low and high arsenic groups based on measured geochemical parameters and microbial communities, by hierarchical clustering and principal coordinates analysis. Richness and diversity of the microbial communities in high arsenic sediments are higher than those in high arsenic groundwater. Microbial community structure was significantly different either between low and high arsenic samples or between groundwater and sediments. Acinetobacter, Pseudomonas, Psychrobacter and Alishewanella were the top four genera in high arsenic groundwater, while Thiobacillus, Pseudomonas, Hydrogenophaga, Enterobacteriaceae, Sulfuricurvum and Arthrobacter dominated high arsenic sediments. Archaeal sequences in high arsenic groundwater were mostly related to methanogens. Biota-environment matching and co-inertia analyses showed that arsenic, total organic carbon, SO4(2-), SO4(2-)/total sulfur ratio, and Fe(2+) were important environmental factors shaping the observed microbial communities. The results of this study expand our current understanding of microbial ecology in high arsenic groundwater aquifers and emphasize the potential importance of microbes in arsenic transformation in the Hetao Basin, Inner Mongolia.

  15. Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing.

    Science.gov (United States)

    Delforno, Tiago Palladino; Lacerda Júnior, Gileno Vieira; Noronha, Melline F; Sakamoto, Isabel K; Varesche, Maria Bernadete A; Oliveira, Valéria M

    2017-02-23

    The 16S rRNA gene amplicon and whole-genome shotgun metagenomic (WGSM) sequencing approaches were used to investigate wide-spectrum profiles of microbial composition and metabolic diversity from a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment. The data were generated by using MiSeq 2 × 250 bp and HiSeq 2 × 150 bp Illumina sequencing platforms for 16S amplicon and WGSM sequencing, respectively. Each approach revealed a distinct microbial community profile, with Pseudomonas and Psychrobacter as predominant genus for the WGSM dataset and Clostridium and Methanosaeta for the 16S rRNA gene amplicon dataset. The virome characterization revealed the presence of two viral families with Bacteria and Archaea as host, Myoviridae, and Siphoviridae. A wide functional diversity was found with predominance of genes involved in the metabolism of acetone, butanol, and ethanol synthesis; and one-carbon metabolism (e.g., methanogenesis). Genes related to the acetotrophic methanogenesis pathways were more abundant than methylotrophic and hydrogenotrophic, corroborating the taxonomic results that showed the prevalence of the acetotrophic genus Methanosaeta. Moreover, the dataset indicated a variety of metabolic genes involved in sulfur, nitrogen, iron, and phosphorus cycles, with many genera able to act in all cycles. BLAST analysis against Antibiotic Resistance Genes Database (ARDB) revealed that microbial community contained 43 different types of antibiotic resistance genes, some of them were associated with growth chicken promotion (e.g., bacitracin, tetracycline, and polymyxin).

  16. Coexistence of Lactic Acid Bacteria and Potential Spoilage Microbiota in a Dairy Processing Environment.

    Science.gov (United States)

    Stellato, Giuseppina; De Filippis, Francesca; La Storia, Antonietta; Ercolini, Danilo

    2015-11-01

    Microbial contamination in food processing plants can play a fundamental role in food quality and safety. In this study, the microbiota in a dairy plant was studied by both 16S rRNA- and 26S rRNA-based culture-independent high-throughput amplicon sequencing. Environmental samples from surfaces and tools were studied along with the different types of cheese produced in the same plant. The microbiota of environmental swabs was very complex, including more than 200 operational taxonomic units with extremely variable relative abundances (0.01 to 99%) depending on the species and sample. A core microbiota shared by 70% of the samples indicated a coexistence of lactic acid bacteria with a remarkable level of Streptococcus thermophilus and possible spoilage-associated bacteria, including Pseudomonas, Acinetobacter, and Psychrobacter, with a relative abundance above 50%. The most abundant yeasts were Kluyveromyces marxianus, Yamadazyma triangularis, Trichosporon faecale, and Debaryomyces hansenii. Beta-diversity analyses showed a clear separation of environmental and cheese samples based on both yeast and bacterial community structure. In addition, predicted metagenomes also indicated differential distribution of metabolic pathways between the two categories of samples. Cooccurrence and coexclusion pattern analyses indicated that the occurrence of potential spoilers was excluded by lactic acid bacteria. In addition, their persistence in the environment can be helpful to counter the development of potential spoilers that may contaminate the cheeses, with possible negative effects on their microbiological quality.

  17. Investigation of mineral water springs of Miercurea Ciuc (Csíkszereda) region (Romania) with cultivation-dependent microbiological methods.

    Science.gov (United States)

    Máthé, I; Táncsics, A; György, Eva; Pohner, Zsuzsanna; Vladár, P; Székely, Anna J; Márialigeti, K

    2010-06-01

    Water samples of ten mineral water springs at Miercurea Ciuc (Csíkszereda) region (Romania) were examined during 2005-2006 using cultivation-dependent microbiological methods. The results of standard hygienic bacteriological tests showed that the Hargita Spring had perfect and five other springs had microbiologically acceptable water quality (Zsögöd-, Nagy-borvíz-, Taploca-, Szentegyháza- and Lobogó springs). The water of Borsáros Spring was exceptionable (high germ count, presence of Enterococcus spp.).Both standard bacteriological and molecular microbiological methods indicated that the microbiological water quality of the Szeltersz-, Nádasszék- and Délo springs was not acceptable. Bad water quality resulted from inadequate spring catchment and hygiene (low yield, lack of runoff, negligent usage of the springs, horse manure around the spring).The 16S rRNA gene-based identification of strains isolated on standard meat-peptone medium resulted in the detection of typical aquatic organisms such as Shewanella baltica, Aeromonas spp., Pseudomonas veronii, Psychrobacter sp,. Acinetobacter spp. and allochthonous microbes, like Nocardia, Streptomyces, Bacillus, Microbacterium , and Arthrobacter strains indicating the impact of soil. Other allochthonous microbes, such as Staphylococcus spp., Micrococcus sp., Lactococcus sp., Clostridium butyricum, Yersinia spp., Aerococcus sp., may have originated from animal/human sources.

  18. Removal of odorous compounds from poultry manure by microorganisms on perlite--bentonite carrier.

    Science.gov (United States)

    Gutarowska, Beata; Matusiak, Katarzyna; Borowski, Sebastian; Rajkowska, Aleksandra; Brycki, Bogumił

    2014-08-01

    Laboratory-scale experiments were conducted using poultry manure (PM) from a laying hen farm. Six strains of bacteria and one strain of yeast, selected on the base of the previous study, were investigated to evaluate their activity in the removal of odorous compounds from poultry manure: pure cultures of Bacillus subtilis subsp. spizizenii LOCK 0272, Bacillus megaterium LOCK 0963, Pseudomonas sp. LOCK 0961, Psychrobacter faecalis LOCK 0965, Leuconostoc mesenteroides LOCK 0964, Streptomyces violaceoruber LOCK 0967, and Candida inconspicua LOCK 0272 were suspended in water solution and applied for PM deodorization. The most active strains in the removal of volatile odorous compounds (ammonia, hydrogen sulfide, dimethylamine, trimethylamine, isobutyric acid) belonged to B. subtilis subsp. spizizenii, L. mesenteroides, C. inconspicua, and P. faecalis. In the next series of experiments, a mixed culture of all tested strains was immobilized on a mineral carrier being a mixture of perlite and bentonite (20:80 by weight). That mixed culture applied for PM deodorization was particularly active against ammonia and hydrogen sulfide, which were removed from the exhaust gas by 20.8% and 17.5%, respectively. The experiments also showed that during deodorization the microorganisms could reduce the concentrations of proteins and amino acids in PM. In particular, the mixed culture was active against cysteine and methionine, which were removed from PM by around 45% within 24 h of deodorization.

  19. Analysis of microbiota on abalone (Haliotis discus hannai) in South Korea for improved product management.

    Science.gov (United States)

    Lee, Min-Jung; Lee, Jin-Jae; Chung, Han Young; Choi, Sang Ho; Kim, Bong-Soo

    2016-10-03

    Abalone is a popular seafood in South Korea; however, because it contains various microorganisms, its ingestion can cause food poisoning. Therefore, analysis of the microbiota on abalone can improve understanding of outbreaks and causes of food poisoning and help to better manage seafood products. In this study, we collected a total of 40 abalones from four different regions in March and July, which are known as the maximum abalone production areas in Korea. The microbiota were analyzed using high-throughput sequencing, and bacterial loads on abalone were quantified by real-time PCR. Over 2700 species were detected in the samples, and Alpha- and Gammaproteobacteria were the predominant classes. The differences in microbiota among regions and at each sampling time were also investigated. Although Psychrobacter was the dominant genus detected on abalone in both March and July, the species compositions were different between the two sampling times. Five potential pathogens (Lactococcus garvieae, Yersinia kristensenii, Staphylococcus saprophyticus, Staphylococcus warneri, and Staphylococcus epidermidis) were detected among the abalone microbiota. In addition, we analyzed the influence of Vibrio parahaemolyticus infection on shifts in abalone microbiota during storage at different temperatures. Although the proportion of Vibrio increased over time in infected and non-infected abalone, the shifts of microbiota were more dynamic in infected abalone. These results can be used to better understand the potential of food poisoning caused by abalone consumption and manage abalone products according to the microbiota composition.

  20. Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.

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    Qingping Xu

    Full Text Available Imelysin-like proteins define a superfamily of bacterial proteins that are likely involved in iron uptake. Members of this superfamily were previously thought to be peptidases and were included in the MEROPS family M75. We determined the first crystal structures of two remotely related, imelysin-like proteins. The Psychrobacter arcticus structure was determined at 2.15 Å resolution and contains the canonical imelysin fold, while higher resolution structures from the gut bacteria Bacteroides ovatus, in two crystal forms (at 1.25 Å and 1.44 Å resolution, have a circularly permuted topology. Both structures are highly similar to each other despite low sequence similarity and circular permutation. The all-helical structure can be divided into two similar four-helix bundle domains. The overall structure and the GxHxxE motif region differ from known HxxE metallopeptidases, suggesting that imelysin-like proteins are not peptidases. A putative functional site is located at the domain interface. We have now organized the known homologous proteins into a superfamily, which can be separated into four families. These families share a similar functional site, but each has family-specific structural and sequence features. These results indicate that imelysin-like proteins have evolved from a common ancestor, and likely have a conserved function.

  1. Accelerated decolorization of reactive azo dyes under saline conditions by bacteria isolated from Arabian seawater sediment.

    Science.gov (United States)

    Khalid, Azeem; Kausar, Farzana; Arshad, Muhammad; Mahmood, Tariq; Ahmed, Iftikhar

    2012-12-01

    Presence of huge amount of salts in the wastewater of textile dyeing industry is one of the major limiting factors in the development of an effective biotreatment system for the removal of azo dyes from textile effluents. Bacterial spp. capable of thriving under high salt conditions could be employed for the treatment of saline dyecontaminated textile wastewaters. The present study was aimed at isolating the most efficient bacterial strains capable of decolorizing azo dyes under high saline conditions. Fiftyeight bacterial strains were isolated from seawater, seawater sediment, and saline soil, using mineral salt medium enriched with 100 mg l−1 Reactive Black-5 azo dye and 50 g NaCl l−1 salt concentration. Bacterial strains KS23 (Psychrobacter alimentarius) and KS26 (Staphylococcus equorum) isolated from seawater sediment were able to decolorize three reactive dyes including Reactive Black 5, Reactive Golden Ovifix, and Reactive Blue BRS very efficiently in liquid medium over a wide range of salt concentration (0-100 g NaCl l)⁻¹. Time required for complete decolorization of 100 mg dye l ⁻¹ varied with the type of dye and salt concentration. In general, there was an inverse linear relationship between the velocity of the decolorization reaction (V) and salt concentration. This study suggested that bacteria isolated from saline conditions such as seawater sediment could be used in designing a bioreactor for the treatment of textile effluent containing high concentration of salts.

  2. Microbial community in high arsenic shallow groundwater aquifers in Hetao Basin of Inner Mongolia, China.

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    Ping Li

    Full Text Available A survey was carried out on the microbial community of 20 groundwater samples (4 low and 16 high arsenic groundwater and 19 sediments from three boreholes (two high arsenic and one low arsenic boreholes in a high arsenic groundwater system located in Hetao Basin, Inner Mongolia, using the 454 pyrosequencing approach. A total of 233,704 sequence reads were obtained and classified into 12-267 operational taxonomic units (OTUs. Groundwater and sediment samples were divided into low and high arsenic groups based on measured geochemical parameters and microbial communities, by hierarchical clustering and principal coordinates analysis. Richness and diversity of the microbial communities in high arsenic sediments are higher than those in high arsenic groundwater. Microbial community structure was significantly different either between low and high arsenic samples or between groundwater and sediments. Acinetobacter, Pseudomonas, Psychrobacter and Alishewanella were the top four genera in high arsenic groundwater, while Thiobacillus, Pseudomonas, Hydrogenophaga, Enterobacteriaceae, Sulfuricurvum and Arthrobacter dominated high arsenic sediments. Archaeal sequences in high arsenic groundwater were mostly related to methanogens. Biota-environment matching and co-inertia analyses showed that arsenic, total organic carbon, SO4(2-, SO4(2-/total sulfur ratio, and Fe(2+ were important environmental factors shaping the observed microbial communities. The results of this study expand our current understanding of microbial ecology in high arsenic groundwater aquifers and emphasize the potential importance of microbes in arsenic transformation in the Hetao Basin, Inner Mongolia.

  3. Screening of microorganisms from deep-sea mud for Antarctic krill (Euphausia superba) fermentation and evaluation of the bioactive compounds.

    Science.gov (United States)

    Sun, Jianan; Kan, Feifei; Liu, Pei; He, Shuai; Mou, Haijin; Xue, Changhu; Mao, Xiangzhao

    2015-02-01

    Twelve kinds of strains were isolated from deep-sea mud which can use Antarctic krill powder as the sole carbon/nitrogen source. These strains were identified by 16s rDNA sequence analysis and grouped into eight different genera, including Bacillus, Shewanella, Psychrobacter, Klebsiella, Macrococcus, Aeromonas, Acinetobacter, and Saccharomyces. After fermentation of Antarctic krill powder using these strains, bioactive compounds including total phenolics, free amino acids, and enzyme activities were investigated. Meanwhile, antioxidant activities of the fermentation liquors were also detected. Results showed that bioactive compounds could be effectively produced through fermentation process by these strains, of which three strains (Bacillus subtilis OKF04, Macrococcus caseolyticus OKF09, and Aeromonas veronii OKF10) could produce more than 650 mg/L total phenolics or 2000 mg/L total free amino acids. In terms of enzyme activities, almost all of the strains showed protease activity and amylase activity, but only Bacillus cereus OKF01 and Bacillus megaterium OKF05 performed lipase activity and chitinase activity, respectively. All of the fermentation liquors showed antioxidant activity, within which Bacillus megaterium OKF05, Macrococcus caseolyticus OKF09, and Aeromonas veronii OKF10 displayed it more prominently. These results demonstrate that the Antarctic krill powder could be effectively converted by microorganisms isolated from deep-sea mud for production of bioactive compounds mixture.

  4. Bacterial communities associated with four ctenophore genera from the German Bight (North Sea).

    Science.gov (United States)

    Hao, Wenjin; Gerdts, Gunnar; Peplies, Jörg; Wichels, Antje

    2015-01-01

    Intense research has been conducted on jellyfish and ctenophores in recent years. They are increasingly recognized as key elements in the marine ecosystem that serve as critical indicators and drivers of ecosystem performance and change. However, the bacterial community associated with ctenophores is still poorly investigated. Based on automated ribosomal intergenic spacer analysis (ARISA) and 16S ribosomal RNA gene amplicon pyrosequencing, we investigated bacterial communities associated with the frequently occurring ctenophore species Mnemiopsis leidyi, Beroe sp., Bolinopsis infundibulum and Pleurobrachia pileus at Helgoland Roads in the German Bight (North Sea). We observed significant differences between the associated bacterial communities of the different ctenophore species based on ARISA patterns. With respect to bacterial taxa, all ctenophore species were dominated by Proteobacteria as revealed by pyrosequencing. Mnemiopsis leidyi and P. pileus mainly harboured Gammaproteobacteria, with Marinomonas as the dominant phylotype of M. leidyi. By contrast, Pseudoalteromonas and Psychrobacter were the most abundant Gammaproteobacteria in P. pileus. Beroe sp. was mainly dominated by Alphaproteobacteria, particularly by the genus Thalassospira. For B. infundibulum, the bacterial community was composed of Alphaproteobacteria and Gammaproteobacteria in equal parts, which consisted of the genera Thalassospira and Marinomonas. In addition, the bacterial communities associated with M. leidyi display a clear variation over time that needs further investigation. Our results indicate that the bacterial communities associated with ctenophores are highly species- specific. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  5. Phylogenetic diversity and phenotypic characterization of cultivable bacterioplankton isolated from polar oceans

    Institute of Scientific and Technical Information of China (English)

    ZENG Yinxin; LI Huirong; YU Yong; CHEN Bo; ZHENG Tianling

    2007-01-01

    A set of 27 marine planktonic bacteria isolated from the polar regions was characterized by 16S rDNA sequencing and physiological and biochemical testing. More than half of these bacteria were positive for caseinase, gelatinase and β-glucosidase, and could utilize glucose, maltose or malic acid as carbon source for cell growth. Twelve isolates expressed nitrate reduction activities. Except for one antarctic isolate BSw10175 belonging to Actinobacteria phylum, these isolates were classified as γ-Proteobacteria, suggesting that γ-Proteobacteria dominated in cultivable marine bacterioplankton at both poles. Genus Pseudoalteromonas was the predominant group in the Chukchi Sea and the Bering Sea, and genus Shewanella dominated in cultivable bacterioplankton in the Prydz Bay. With sequence similarities above 97%, genus Psychrobacter was found at both poles. These 27 isolates were psychrotolerant, and significant 16S rDNA sequence similarities were found not only between arctic and antarctic marine bacteria ( > 99% ),but also between polar marine bacteria and bacteria from other aquatic environments ( ≥98.8% ) , including temperate ocean,deep sea, pond and lake, suggesting that in the polar oceans less temperature-sensitive bacteria may be cosmopolitan and have a bipolar, even global, distribution at the species level.

  6. The culturable intestinal microbiota of triploid and diploid juvenile Atlantic salmon (Salmo salar - a comparison of composition and drug resistance

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    Cantas Leon

    2011-11-01

    Full Text Available Abstract Background With the increased use of ploidy manipulation in aquaculture and fisheries management this investigation aimed to determine whether triploidy influences culturable intestinal microbiota composition and bacterial drug resistance in Atlantic salmon (Salmo salar. The results could provide answers to some of the physiological differences observed between triploid and diploid fish, especially in terms of fish health. Results No ploidy effect was observed in the bacterial species isolated, however, triploids were found to contain a significant increase in total gut microbiota levels, with increases in Pseudomonas spp., Pectobacterium carotovorum, Psychrobacter spp., Bacillus spp., and Vibrio spp., (12, 42, 9, 10, and 11% more bacteria in triploids than diploids, respectively, whereas a decrease in Carnobacterium spp., within triploids compared to diploids was close to significant (8% more bacteria in diploids. With the exception of gentamicin, where no bacterial resistance was observed, bacterial isolates originating from triploid hosts displayed increased resistance to antibacterials, three of which were significant (tetracycline, trimethoprim, and sulphonamide. Conclusion Results indicate that triploidy influences both the community and drug resistance of culturable intestinal microbiota in juvenile salmon. These results demonstrate differences that are likely to contribute to the health of triploid fish and have important ramifications on the use of antibacterial drugs within aquaculture.

  7. Astaxanthin from psychrotrophic Sphingomonas faeni exhibits antagonism against food-spoilage bacteria at low temperatures.

    Science.gov (United States)

    Mageswari, Anbazhagan; Subramanian, Parthiban; Srinivasan, Ramachandran; Karthikeyan, Sivashanmugam; Gothandam, Kodiveri Muthukaliannan

    2015-10-01

    Food production and processing industry holds a perpetual relationship with microorganisms and their by-products. In the present study, we aimed to identify beneficial cold-adapted bacteria devoid of any food spoilage properties and study their antagonism against common food-borne pathogens at low temperature conditions. Ten isolates were obtained on selective isolation at 5 °C, which were spread across genera Pseudomonas, Sphingomonas, Psychrobacter, Leuconostoc, Rhodococcus, and Arthrobacter. Methanol extracts of strains were found to contain several bioactive metabolites. Among the studied isolates, methanol extracts of S. faeni ISY and Rhodococcus fascians CS4 were found to show antagonism against growth of Escherichia coli, Proteus mirabilis, Enterobacter aerogenes, Listeria monocytogenes and Vibrio fischeri at refrigeration temperatures. Characterization of the abundant yellow pigment in methanol extracts of S. faeni ISY through UV-Vis spectrophotometry, high performance liquid chromatography (HPLC) and mass spectrometry (LC-MS) revealed the presence of astaxanthin, which, owing to its presence in very large amounts and evidenced to be responsible for antagonistic activity of the solvent extract.

  8. Persistence of bacterial and archaeal communities in sea ice through an Arctic winter.

    Science.gov (United States)

    Collins, R Eric; Rocap, Gabrielle; Deming, Jody W

    2010-07-01

    The structure of bacterial communities in first-year spring and summer sea ice differs from that in source seawaters, suggesting selection during ice formation in autumn or taxon-specific mortality in the ice during winter. We tested these hypotheses by weekly sampling (January-March 2004) of first-year winter sea ice (Franklin Bay, Western Arctic) that experienced temperatures from -9 degrees C to -26 degrees C, generating community fingerprints and clone libraries for Bacteria and Archaea. Despite severe conditions and significant decreases in microbial abundance, no significant changes in richness or community structure were detected in the ice. Communities of Bacteria and Archaea in the ice, as in under-ice seawater, were dominated by SAR11 clade Alphaproteobacteria and Marine Group I Crenarchaeota, neither of which is known from later season sea ice. The bacterial ice library contained clones of Gammaproteobacteria from oligotrophic seawater clades (e.g. OM60, OM182) but no clones from gammaproteobacterial genera commonly detected in later season sea ice by similar methods (e.g. Colwellia, Psychrobacter). The only common sea ice bacterial genus detected in winter ice was Polaribacter. Overall, selection during ice formation and mortality during winter appear to play minor roles in the process of microbial succession that leads to distinctive spring and summer sea ice communities.

  9. Characterization of the prokaryotic diversity through a stratigraphic permafrost core profile from the Qinghai-Tibet Plateau.

    Science.gov (United States)

    Hu, Weigang; Zhang, Qi; Tian, Tian; Li, Dingyao; Cheng, Gang; Mu, Jing; Wu, Qingbai; Niu, Fujun; An, Lizhe; Feng, Huyuan

    2016-05-01

    Permafrost on the Qinghai-Tibet Plateau is one of the most sensitive regions to climate warming, thus characterizing its microbial diversity and community composition may be important for understanding their potential responses to climate changes. Here, we investigated the prokaryotic diversity in a 10-m-long permafrost core from the Qinghai-Tibet Plateau by restriction fragment length polymorphism analysis targeting the 16S rRNA gene. We detected 191 and 17 bacterial and archaeal phylotypes representing 14 and 2 distinct phyla, respectively. Proteobacteria was the dominant bacterial phylum, while archaeal communities were characterized by a preponderance of Thaumarchaeota. Some of prokaryotic phylotypes were closely related to characterized species involved in carbon and nitrogen cycles, including nitrogen fixation, methane oxidation and nitrification. However, the majority of the phylotypes were only distantly related to known taxa at order or species level, suggesting the potential of novel diversity. Additionally, both bacterial α diversity and community composition changed significantly with sampling depth, where these communities mainly distributed according to core horizons. Arthrobacter-related phylotypes presented at high relative abundance in two active layer soils, while the deeper permafrost soils were dominated by Psychrobacter-related clones. Changes in bacterial community composition were correlated with most measured soil variables, such as carbon and nitrogen contents, pH, and conductivity.

  10. Microbial Diversity of Indian Ocean Hydrothermal Vent Plumes: Microbes Tolerant of Desiccation, Peroxide Exposure, and Ultraviolet and γ-Irradiation

    Science.gov (United States)

    La Duc, Myron T.; Benardini, James N.; Kempf, Michael J.; Newcombe, David A.; Lubarsky, Michael; Venkateswaran, Kasthuri

    2007-05-01

    The microbial diversity of Kali chimney plumes, part of a hydrothermal vent field in the Rodriguez Triple Junction, Indian Ocean (depth approximately 2,240 m), was examined in an attempt to discover ``extremotolerant'' microorganisms that have evolved unique resistance capabilities to this harsh environment. Water and sediment samples were collected from the vent and from sediments located at various distances (2-20 m) away from and surrounding the chimney. Samples were screened for hypertolerant microbes that are able to withstand multiple stresses. A total of 46 isolates were selected for exposure to a number of perturbations, such as heat shock, desiccation, H2O2, and ultraviolet (UV) and γ-irradiation. The survival of Psychrobacter sp. L0S3S-03b following exposure to >1,000 J/m2 UV254 radiation was particularly intriguing amid a background of varying levels of resistance. Vegetative cells of this non-spore-forming microbe not only survived all of the treatments, but also exhibited a 90% lethal dose of 30 s when exposed to simulated martian UV radiation and a 100% lethal dose of 2 min when exposed to full spectrum UV, which is comparable to findings for bacterial endospores.

  11. Serpentine bacteria influence metal translocation and bioconcentration of Brassica juncea and Ricinus communis grown in multi-metal polluted soils

    Science.gov (United States)

    Ma, Ying; Rajkumar, Mani; Rocha, Inês; Oliveira, Rui S.; Freitas, Helena

    2015-01-01

    The aim of this study was to assess the effects of inoculation of rhizosphere or endophytic bacteria (Psychrobacter sp. SRS8 and Pseudomonas sp. A3R3, respectively) isolated from a serpentine environment on the plant growth and the translocation and accumulation of Ni, Zn, and Fe by Brassica juncea and Ricinus communis on a multi-metal polluted serpentine soil (SS). Field collected SS was diluted to 0, 25, 50, and 75% with pristine soil in order to obtain a range of heavy metal concentrations and used in microcosm experiments. Regardless of inoculation with bacteria, the biomass of both plant species decreased with increase of the proportion of SS. Inoculation of plants with bacteria significantly increased the plant biomass and the heavy metal accumulation compared with non-inoculated control in the presence of different proportion of SS, which was attributed to the production of plant growth promoting and/or metal mobilizing metabolites by bacteria. However, SRS8 showed a maximum increase in the biomass of the test plants grown even in the treatment of 75% SS. In turn, A3R3 showed maximum effects on the accumulation of heavy metals in both plants. Regardless of inoculation of bacteria and proportion of SS, both plant species exhibited low values of bioconcentration factor (communis in SS soils and have a great potential to be used as inoculants in phytostabilization scenarios of multi-metal contaminated soils. PMID:25601876

  12. Whole-body Microbiota of Sea Cucumber (Apostichopus japonicus) from South Korea for Improved Seafood Management.

    Science.gov (United States)

    Kim, Tae-Yoon; Lee, Jin-Jae; Kim, Bong-Soo; Choi, Sang Ho

    2017-08-31

    Sea cucumber (Apostichopus japonicus) is a popular seafood source in Asia, including South Korea, and its consumption has recently increased with recognition of its medicinal properties. However, because raw sea cucumber contains various microbes, its ingestion can cause foodborne illness. Therefore, analysis of the microbiota in the whole body of sea cucumber can extend our understanding of foodborne illness caused by microorganisms and help to better manage products. We collected 40 sea cucumbers from four different sites in August and November, which are known as the maximum production areas in Korea. The microbiota was analyzed by an Illumina Miseq system, and bacterial amounts were quantified by real-time PCR. The diversity and bacterial amounts in sea cucumber were higher in August than in November. Alpha-, Beta-, and Gammaproteobacteria were common dominant classes in all samples. However, the microbiota composition differed according to sampling time and site. Staphylococcus warneri and Propionibacterium acnes were commonly detected potential pathogens in August and November samples, respectively. The effect of experimental Vibrio parahaemolyticus infection on the indigenous microbiota of sea cucumber was analyzed at different temperatures, revealing clear alterations of Psychrobacter and Moraxella; thus, these shifts can be used as indicators for monitoring infection of sea cucumber. Although further studies are needed to clarify and understand the virulence and mechanisms of the identified pathogens of sea cucumber, our study provides a valuable reference for determining the potential of foodborne illness caused by sea cucumber ingestion and to develop monitoring strategies of products using microbiota information.

  13. The spoilage of air-packaged broiler meat during storage at normal and fluctuating storage temperatures.

    Science.gov (United States)

    Zhang, Q Q; Han, Y Q; Cao, J X; Xu, X L; Zhou, G H; Zhang, W Y

    2012-01-01

    Bacterial diversity and the major flora present on air-packaged broiler meat during storage at normal (4°C) and fluctuating storage temperatures (0-4°C and 4-10°C) were investigated using culture-dependent and culture-independent approaches. Culture-dependent analysis revealed that the growth of microflora was retarded when broiler meat was stored at lower temperatures (0-4°C). Denaturing gradient gel electrophoresis profiles showed that Staphylococcus spp., Pseudomonas spp., Acinetobacter spp., Carnobacterium spp., Aeromonas spp., and Weissella spp. were the dominant bacteria throughout all storage conditions. Enterobacteriaceae only appeared in samples subjected to storage with high temperature abuse, whereas Shewanella spp. and Psychrobacter spp. were only detected in samples stored below 4°C. Our results provide evidence that, compared with storage at a standard fixed temperature (4°C), fluctuations in temperatures induce a more complex bacterial diversity in the air-packaged broiler.

  14. Microbiological Hazards Assessment of Psychrotrophic Microflora in Bovine Carcasses Slaughtered in North West Romania

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    Silviu Vida

    2016-11-01

    Full Text Available Gram negative bacteria have the greatest capacity to spoil the meat if kept under aerobic conditions, therefor the members of the genera Pseudomonas, Acinetobater, Psychrobacter and Moraxella, will form the dominant microflora. The purpose of this study was to assess the contamination level with psychrotropic microflora of bovine carcasses in order to prove how the results could be used to improve the slaughter process. The research was carried out between January-December 2015, in two slaughterhouses from North West Romania.  The research material was represented by 144 meat samples (slaughterhouse A, n=72, slaughterhouse B, n=72. Weekly, 3 samples were collected from refrigerated carcasses, and examined for total psychrotrophic counts (TPC, Enterobacteriaceae, Pseudomonas, Aeromonas and Yersinia. From statistical processing of recorded data was established that mean log TPC from the surface of refrigerated carcasses has presented different values, ranged between 3.70±0.20 log CFU/cm2 and 6.90±0.43 log CFU/cm2. Initial surface microflora of bovine carcasses was represented by germs from the following genera: Staphylococcus, Micrococcus, Aeromonas, Acinetobacter, Pseudomonas, Yersinia, Serratia, Hafnia, Proteus and Escherichia. Microbiological hazard assessment reveals the key role of psychotropic microorganisms in the spoilage of meat, if the monitoring system of the slaughtering process is not functioning properly.

  15. Antimicrobial Activity of Monoramnholipids Produced by Bacterial Strains Isolated from the Ross Sea (Antarctica

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    Pietro Tedesco

    2016-04-01

    Full Text Available Microorganisms living in extreme environments represent a huge reservoir of novel antimicrobial compounds and possibly of novel chemical families. Antarctica is one of the most extraordinary places on Earth and exhibits many distinctive features. Antarctic microorganisms are well known producers of valuable secondary metabolites. Specifically, several Antarctic strains have been reported to inhibit opportunistic human pathogens strains belonging to Burkholderia cepacia complex (Bcc. Herein, we applied a biodiscovery pipeline for the identification of anti-Bcc compounds. Antarctic sub-sea sediments were collected from the Ross Sea, and used to isolate 25 microorganisms, which were phylogenetically affiliated to three bacterial genera (Psychrobacter, Arthrobacter, and Pseudomonas via sequencing and analysis of 16S rRNA genes. They were then subjected to a primary cell-based screening to determine their bioactivity against Bcc strains. Positive isolates were used to produce crude extracts from microbial spent culture media, to perform the secondary screening. Strain Pseudomonas BNT1 was then selected for bioassay-guided purification employing SPE and HPLC. Finally, LC-MS and NMR structurally resolved the purified bioactive compounds. With this strategy, we achieved the isolation of three rhamnolipids, two of which were new, endowed with high (MIC < 1 μg/mL and unreported antimicrobial activity against Bcc strains.

  16. Antimicrobial Activity of Monoramnholipids Produced by Bacterial Strains Isolated from the Ross Sea (Antarctica) †

    Science.gov (United States)

    Tedesco, Pietro; Maida, Isabel; Palma Esposito, Fortunato; Tortorella, Emiliana; Subko, Karolina; Ezeofor, Chidinma Christiana; Zhang, Ying; Tabudravu, Jioji; Jaspars, Marcel; Fani, Renato; de Pascale, Donatella

    2016-01-01

    Microorganisms living in extreme environments represent a huge reservoir of novel antimicrobial compounds and possibly of novel chemical families. Antarctica is one of the most extraordinary places on Earth and exhibits many distinctive features. Antarctic microorganisms are well known producers of valuable secondary metabolites. Specifically, several Antarctic strains have been reported to inhibit opportunistic human pathogens strains belonging to Burkholderia cepacia complex (Bcc). Herein, we applied a biodiscovery pipeline for the identification of anti-Bcc compounds. Antarctic sub-sea sediments were collected from the Ross Sea, and used to isolate 25 microorganisms, which were phylogenetically affiliated to three bacterial genera (Psychrobacter, Arthrobacter, and Pseudomonas) via sequencing and analysis of 16S rRNA genes. They were then subjected to a primary cell-based screening to determine their bioactivity against Bcc strains. Positive isolates were used to produce crude extracts from microbial spent culture media, to perform the secondary screening. Strain Pseudomonas BNT1 was then selected for bioassay-guided purification employing SPE and HPLC. Finally, LC-MS and NMR structurally resolved the purified bioactive compounds. With this strategy, we achieved the isolation of three rhamnolipids, two of which were new, endowed with high (MIC < 1 μg/mL) and unreported antimicrobial activity against Bcc strains. PMID:27128927

  17. Reactive oxygen species are related to ionic fluxes and volume decrease in apoptotic cerebellar granule neurons: role of NOX enzymes.

    Science.gov (United States)

    Hernández-Enríquez, Berenice; Guemez-Gamboa, Alicia; Morán, Julio

    2011-05-01

    Reactive oxygen species (ROS) are produced early during apoptosis of cerebellar granule neurons induced by low potassium (K5) and staurosporine (Sts). In addition, K5 and Sts activate NADPH oxidases (NOX). Recently, we described that K5 and Sts induce apoptotic volume decrease (AVD) at a time when ROS generation and NOX activity occur. In the present study, we evaluated the relationship between ROS generation and ionic fluxes during AVD. Here, we showed that K5- and Sts-induced AVD was inhibited by antioxidants and that direct ROS production induced AVD. Moreover, NOX inhibitors eliminated AVD induced by both K5 and Sts. Sts, but not K5, failed to induce AVD in cerebellar granule neurons from NOX2 knockout mice. These findings suggest that K5- and Sts-induced AVD is largely mediated by ROS produced by NOX. On the other hand, we also found that the blockage of ionic fluxes involved in AVD inhibited both ROS generation and NOX activity. These findings suggest that ROS generation and NOX activity are involved in ionic fluxes activation, which in turn could maintain ROS generation by activating NOX, leading to a self-amplifying cycle.

  18. Human kallikrein 5 as a novel prognostic biomarker for triple-negative breast cancer: tissue expression analysis and relationship with disease course.

    Science.gov (United States)

    Yang, F; Li, J Y; Yin, Q N; Yang, K; Dong, S N; Bai, L J; Liu, P; Tong, X W

    2015-08-14

    The purposes of this study were to analyze the expression and distribution of human kallikrein 5 (hK5) in triple-negative breast cancer (TNBC) tissues, to establish a standard operating procedure (SOP) for its immunohistochemical assay, and to evaluate the possibility of hK5 being a prognostic biomarker for TNBC. Recombinant hK5 protein and specific antibody were prepared, and the expression and distribution of hK5 in TNBC tissues were detected using immunohistochemistry. An SOP for immunohistochemical staining of hK5 in TNBC tissues was established to allow automatic staining under optimized conditions. The resulting images were digitized for evaluation and statistical analysis via a human scoring system. Our results showed that expression of hK5 protein could predict the progression of TNBC. Pearson's chi-square test results showed that high hK5 expression in tumor stromal cells was significantly correlated with distal metastasis (P = 0.039). A high staining score for lymphocyte infiltration in tumor stroma was significantly correlated with low histological grade of tumor (P = 0.025). Univariate and multivariate Cox regression analyses verified that the staining score for hK5 in tumor stromal cells may be a biomarker for poor prognosis in TNBC patients (univariate HR = 2.289, 95%CI = 1.362-3.848, P = 0.002; multivariate HR = 2.105, 95%CI = 1.189-3.727, P = 0.011). In conclusion, the expression level of hK5 in tumor stromal cells is a promising biomarker for poor prognosis in TNBC. Patients with high histological grade are more prone to distal metastasis and aggressive tumor progression.

  19. MAGNETO-ABRASIVE MACHINING OF SURFACES FORMED BY ELECTROMAGNET SURFACING WITH PLASTIC DEFORMATION

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    Zh. A. Mrochek

    2011-01-01

    Full Text Available The paper presents investigation results pertaining to magneto-abrasive machining of product surfaces formed by electromagnet surfacing with a plastic deformation of P6M5K5 powder. 

  20. AcEST: DK947243 [AcEST

    Lifescience Database Archive (English)

    Full Text Available BlastX Result : Swiss-Prot sp_hit_id A6Q0K5 Definition sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chl...one Score E Sequences producing significant alignments: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin cycle prote... sp|P12859|G3PB_PEA Glyceraldehyde-3-phosphate dehydrogenase B, c... 32 1.2 >sp|A6Q0K5|CP12_CHLRE Calvin cyc... OS=Physcomit... 57 6e-07 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle protein CP12 OS=Volvox carte... 57 6e-07 tr|Q9

  1. AcEST: BP915508 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 0K5 Definition sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii Align length 53 S...ignments: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas ... 73 9e-13 sp|P1286...p|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related pr... 30 9.1 >sp|A6Q0K5|CP12_CHLRE Calvin cycle...protein OS=Arabidopsis ... 70 5e-11 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle protein CP12 OS=Volvox carte... 70 6

  2. AcEST: DK963012 [AcEST

    Lifescience Database Archive (English)

    Full Text Available ss-Prot sp_hit_id A6Q0K5 Definition sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas reinhard...es producing significant alignments: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin cyc...lated pr... 32 3.9 >sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1... OS=Arab... 88 5e-16 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle protein CP12 OS=Volvox carte... 85 5e-15 tr|O24360|

  3. AcEST: DK944073 [AcEST

    Lifescience Database Archive (English)

    Full Text Available e 56.9) Link to BlastX Result : Swiss-Prot sp_hit_id A6Q0K5 Definition sp|A6Q0K5|CP12_CHLRE Calvin cycle pro..................done Score E Sequences producing significant alignments: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin...ceptor-related pr... 32 3.5 >sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Ch...ATH Putative chloroplast protein CP12 OS=Arab... 88 5e-16 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle protein CP12 O

  4. AcEST: DK946612 [AcEST

    Lifescience Database Archive (English)

    Full Text Available : (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas .....|LRP2_HUMAN Low-density lipoprotein receptor-related pr... 32 3.5 >sp|A6Q0K5|CP12_CHLRE Calvin...s sp. ... 89 3e-16 tr|O22914|O22914_ARATH Putative chloroplast protein CP12 OS=Arab... 88 5e-16 tr|A1YQX6|A1YQX6_VOLCA Calvin...search results ■■ - Swiss-Prot (release 56.9) Link to BlastX Result : Swiss-Prot sp_hit_id A6Q0K5 Definition sp|A6Q0K5|CP12_CHLRE Cal...vin cycle protein CP12 OS=Chlamydomonas reinhardtii Align length 75 Score (bit) 89.

  5. AcEST: DK949431 [AcEST

    Lifescience Database Archive (English)

    Full Text Available t (release 56.9) Link to BlastX Result : Swiss-Prot sp_hit_id A6Q0K5 Definition sp|A6Q0K5|CP12_CHLRE Calvin ...........................done Score E Sequences producing significant alignments: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin...rotein receptor-related pr... 32 3.7 >sp|A6Q0K5|CP12_CHLRE Calvin cycle protein C...O22914_ARATH Putative chloroplast protein CP12 OS=Arab... 88 5e-16 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle prote

  6. Anti-inflammatory properties of the medicinal mushroom Cordyceps militaris might be related to its linear (1¿3)-ß-D-glucan.

    NARCIS (Netherlands)

    Smiderle, F.R.; Baggio, C.H.; Borato, D.G.; Santana-Filho, A.P.; Sassaki, G.L.; Iacomini, M.; Griensven, van L.J.L.D.

    2014-01-01

    The Ascomycete Cordyceps militaris, an entomopathogenic fungus, is one of the most important traditional Chinese medicines. Studies related to its pharmacological properties suggest that this mushroom can exert interesting biological activities. Aqueous (CW and HW) and alkaline (K5) extracts

  7. Cradleboard's New Dome School. A Real Learning Experience.

    Science.gov (United States)

    Grones, Freda

    1998-01-01

    Describes how the construction of a new domed K-5, multipurpose facility created a learning experience for its students. Highlights the cost savings realized in its construction, and the interior design's minor problems with sound and storage. (GR)

  8. 301-IJBCS-Article-Prof Gabriel R Kassenga

    African Journals Online (AJOL)

    Dr Gatsing

    ARU),. P. O. Box 35176 ... subsequent handling, transportation, and storage. Growth of microorganisms may occur via agencies such ... the long-term impact of waters of various chemical .... K (5 each), ammonia, bicarbonate and iron (2 each), and ...

  9. Genome Sequence of Mycobacterium Phage Waterfoul

    Science.gov (United States)

    Jackson, Paige N.; Embry, Ella K.; Johnson, Christa O.; Watson, Tiara L.; Weast, Sayre K.; DeGraw, Caroline J.; Douglas, Jessica R.; Sellers, J. Michael; D’Angelo, William A.

    2016-01-01

    Waterfoul is a newly isolated temperate siphovirus of Mycobacterium smegmatis mc2155. It was identified as a member of the K5 cluster of Mycobacterium phages and has a 61,248-bp genome with 95 predicted genes. PMID:27856585

  10. Haploid genetic screens identify an essential role for PLP2 in the downregulation of novel plasma membrane targets by viral E3 ubiquitin ligases.

    Directory of Open Access Journals (Sweden)

    Richard T Timms

    Full Text Available The Kaposi's sarcoma-associated herpesvirus gene products K3 and K5 are viral ubiquitin E3 ligases which downregulate MHC-I and additional cell surface immunoreceptors. To identify novel cellular genes required for K5 function we performed a forward genetic screen in near-haploid human KBM7 cells. The screen identified proteolipid protein 2 (PLP2, a MARVEL domain protein of unknown function, as essential for K5 activity. Genetic loss of PLP2 traps the viral ligase in the endoplasmic reticulum, where it is unable to ubiquitinate and degrade its substrates. Subsequent analysis of the plasma membrane proteome of K5-expressing KBM7 cells in the presence and absence of PLP2 revealed a wide range of novel K5 targets, all of which required PLP2 for their K5-mediated downregulation. This work ascribes a critical function to PLP2 for viral ligase activity and underlines the power of non-lethal haploid genetic screens in human cells to identify the genes involved in pathogen manipulation of the host immune system.

  11. Haploid genetic screens identify an essential role for PLP2 in the downregulation of novel plasma membrane targets by viral E3 ubiquitin ligases.

    Directory of Open Access Journals (Sweden)

    Richard T Timms

    Full Text Available The Kaposi's sarcoma-associated herpesvirus gene products K3 and K5 are viral ubiquitin E3 ligases which downregulate MHC-I and additional cell surface immunoreceptors. To identify novel cellular genes required for K5 function we performed a forward genetic screen in near-haploid human KBM7 cells. The screen identified proteolipid protein 2 (PLP2, a MARVEL domain protein of unknown function, as essential for K5 activity. Genetic loss of PLP2 traps the viral ligase in the endoplasmic reticulum, where it is unable to ubiquitinate and degrade its substrates. Subsequent analysis of the plasma membrane proteome of K5-expressing KBM7 cells in the presence and absence of PLP2 revealed a wide range of novel K5 targets, all of which required PLP2 for their K5-mediated downregulation. This work ascribes a critical function to PLP2 for viral ligase activity and underlines the power of non-lethal haploid genetic screens in human cells to identify the genes involved in pathogen manipulation of the host immune system.

  12. 姥鲨共附生微生物抗菌活性筛选及系统发育分析%Screening and phylogenetic analysis of symbiotic and epiphyte microorganisms with Cetorhinus maximus

    Institute of Scientific and Technical Information of China (English)

    王灿; 曹张军; 邵志宇; 黄备; 闵怀; 胡灏琰; 焦炳华; 张兴群

    2009-01-01

    目的 以深海姥鲨鱼鳃和胃肠道共附生微生物为研究对象,对可培养微生物进行分离、纯化和初步鉴定,筛选抗菌活性,为寻找天然活性产物奠定基础.方法 采用倍比稀释涂布和划线法结合分离纯化可培养微生物;以枯草芽孢杆菌、金黄色葡萄球菌、大肠杆菌、铜绿假单胞菌、产气肠杆菌、白色念珠菌为抗菌活性筛选模型,利用琼脂块法和滤纸片法筛选纯培养菌株抗菌活性;利用形态观察、生理生化反应和16S rRNA技术对抑菌活性进行初步鉴定.结果 从姥鲨鱼鳃和胃肠道分离得到的可培养微生物36株,其中来自鱼鳃5株,来自胃肠道31株;菌株统计表明:真菌7株,占19%;放线菌1株,占3%;细菌28株,占78%.对23株来自姥鲨胃肠道的细菌进行抗菌活性筛选,15种表现抗(抑)菌活性,占分离菌株的65%.他们分别隶属于芽孢杆菌属(Bacillus)5株,葡萄球菌属(Staphylococcus)6株,短波单胞菌属(Brevundimonas)2株,嗜冷杆菌属(Psychrobacter)2株.结论 利用常规微生物学技术可以对姥鲨胃肠道和鱼鳃等部位存在共附生微生物分离和纯化,其中超过50%的菌株表现抗(抑)菌效果.%Objective To investigate, purify, screen and identify antimicrobial activities of the strains of cuhurable microorganisms from gills, stomachs or intestines. Methods A total of 452 cuhurable microorganisms and 36 strains were isolated from gills, stomachs or intestines of Cetorhinus maximus (Basking shark), of which 5 strains were from gills and 31 strains were from stomachs or intestines. In all, there were 7 strains of fungi (19%), 1 strain of actinomycetes (3%) and 28 strains of bacteria (78%). Molecular identification and classification of 15 isolates based on 16S rRNA sequences indicated that they belonged to the Bacillus, Brevundimonas, Staphylococcus, Staphylococcus xylosus, Bacillus pumilus. Antibacterial activity was screened for the cuhurable bacteria. Results Laboratory

  13. 南极嗜冷杆菌脂肪酶的原核可溶性表达优化及酶学性能表征%Optimized soluble expression and characterization of a cold-adapted lipase from psychrotrophic bacterium in Escherichia coli

    Institute of Scientific and Technical Information of China (English)

    刘弘忍; 王亮亮; 何琦阳; 王飞; 李迅

    2016-01-01

    Lipase is any enzyme that catalyzes the hydrolysis of lipids, and is the subclass of the esterases. Given its ex⁃cellent functions, lipase plays an indispensable role in many industrial areas such as food processing and biodiesel prepa⁃ration. In this paper, in order to effectively improve the ulilization of lipase from microbes, a psychrophilic lipase gene from antarctic psychrotrophic bacterium, Psychrobacter sp. 7195 ( Lip7195) was cloned into the commercial plasmid pTrc99a by the methods of polymerase chain reaction ( PCR) and DNA restriction enzyme digestion as well as ligation. The recombinant lipase was chemically induced in the presence of isopropyl β⁃D⁃Thiogalactoside ( IPTG) and heterolo⁃gously expressed in Escherichia coli. The proportion of the soluble recombinant lipase was significantly enhanced by a se⁃ries of modifications at various levels including optimizing codon usage, incorporating polycationic amino acid tags. The engineered recombinant lipase showed the maximum activities at 40℃ and pH 9.0. The specific activity was determined as 10.9 U/mg. The thermal stability assay exhibited that Lip7195 was fairly thermally stable at the temperatures ranging from 30 to 40℃, and at the pH values from 8.0 to 10.0. The recombinant Lip7195 was chemically activated in the pres⁃ence of metal ion Co2+ under the assay conditions. The results indicate that these modifications can effectively decrease the formation of inclusion body in the protein biosynthesis process in E. coli. Apart from the decrease in the inclusion body of the desired protein, the biochemical property and catalytic ability of recombinant Lip7195 can be intactly main⁃tained after the relevant modifications.%脂肪酶广泛应用于食品加工、生物柴油制备等领域。为了有效提高微生物脂肪酶的可利用度,将来源于南极嗜冷杆菌属( antarctic psychrotrophic bacterium, Psychrobacter sp�7195)的嗜冷脂肪酶( Lip7195)在大肠杆

  14. Bacterial flora and antimicrobial resistance in raw frozen cultured seafood imported to Denmark.

    Science.gov (United States)

    Noor Uddin, Gazi M; Larsen, Marianne Halberg; Guardabassi, Luca; Dalsgaard, Anders

    2013-03-01

    Intensified aquaculture includes the use of antimicrobials for disease control. In contrast to the situation in livestock, Escherichia coli and enterococci are not part of the normal gastrointestinal flora of fish and shrimp and therefore not suitable indicators of antimicrobial resistance in seafood. In this study, the diversity and phenotypic characteristics of the bacterial flora in raw frozen cultured and wild-caught shrimp and fish were evaluated to identify potential indicators of antimicrobial resistance. The bacterial flora cultured on various agar media at different temperatures yielded total viable counts of 4.0 × 10(4) to 3.0 × 10(5) CFU g(-1). Bacterial diversity was indicated by 16S rRNA sequence analysis of 84 isolates representing different colony types; 24 genera and 51 species were identified. Pseudomonas spp. (23% of isolates), Psychrobacter spp. (17%), Serratia spp. (13%), Exiguobacterium spp. (7%), Staphylococcus spp. (6%), and Micrococcus spp. (6%) dominated. Disk susceptibility testing of 39 bacterial isolates to 11 antimicrobials revealed resistance to ampicillin, amoxicillin-clavulanic acid, erythromycin, and third generation cephalosporins. Resistance to third generation cephalosporins was found in Pseudomonas, a genus naturally resistant to most β-lactam antibiotics, and in Staphylococcus hominis. Half of the isolates were susceptible to all antimicrobials tested. Results indicate that identification of a single bacterial resistance indicator naturally present in seafood at point of harvest is unlikely. The bacterial flora found likely represents a processing rather than a raw fish flora because of repeated exposure of raw material to water during processing. Methods and appropriate indicators, such as quantitative PCR of resistance genes, are needed to determine how antimicrobials used in aquaculture affect resistance of bacteria in retailed products.

  15. 海洋贝类附生细菌区系分析及弧菌拮抗菌的筛选%Isolation and biodiversity analysis of bacteria attached on the marine shellfish and selection of vibrios-antagnism bacteria

    Institute of Scientific and Technical Information of China (English)

    张柯; 丁翠玲; 张栋

    2011-01-01

    对中国威海近海海域的紫贻贝、牡蛎、花蛤、毛蛤、扇贝、海兔等6种海洋贝类的附生细菌进行了分离培养,筛选得到100株细菌。从中选出45株有代表性的菌株,克隆其16SrDNA序列,进行分子鉴定。结果表明,这些细菌分布在 Arthrobacter, Bacillus, Bizionia, Brevundimonas, Cellulophaga, Cobetia, Gelidibacter, Kocuria, Krokinobacter, Lacinutrix, Marinobacter, Mierobacteri%A preliminary screening of bacteria attached on the marine shellfish from six marine shellfishes(Mytilus edulis, Concha ostreae, Ruditapes variegate, Anadara uropygimelana, Placopecta magellanicus, and Ovula ovum) in the coastal waters of Weihai yielded 100 isolates, among which 45 strains were selected for further analysis. To investigate the phylogenetic position of these strains, the 16S rDNA sequences were cloned, sequenced, and com- pared with those of related strains and a molecular phylogenetic dendrogram was constructed based on genetic dis- tance analysis. The strains were classified as members of genera Arthrobacter, Bacillus, Bizionia, Brevundimonas, Cellulophaga, Cobetia, Gelidibacter, Kocuria Krokinobacter, Lacinutrix, Marinobacter, Microbacterium, Micrococcus, Paracoccus, Planomicrobium, Pseudoalteromonas ,Psychrobacter, Salinibacterium, Shewanella, Tenaci- baculum, and Vibrio. The antimicrobial activity of the 100 strains were screened by the agar flat seeding method. The experiment results showed that 2 strains had obvious antimicrobial activity.

  16. Phytoplankton and bacterial community structures and their interaction during red-tide phenomena

    Science.gov (United States)

    Ismail, Mona Mohamed; Ibrahim, Hassan Abd Allah

    2017-07-01

    Phytoplankton and bacteria diversity were studied before, during and after red tide phenomena during spring season 2015 in the Eastern Harbour (E.H.) of Alexandria, Egypt. Fifty five species of phytoplankton were identified and represented different distinct classes "Bacillariophyceae; Dinophyceae, Chlorophyceae, Cyanophyceae and Eugelenophyceae". Also, Diatom formed the most dominant group. The average number of the phytoplankton density varied from 4.8 × 104 to 1.1 × 106 cell l-1 during the study period and Skeletonema costatum was the agent causing the red tide. The existence percentages of bacteria ranged from 2.6 to 17.9% on all media tested. The bacterial isolates on the nutrient agar medium represented the highest existence with a total percentage of 43.6%, followed by MSA medium (25.7%), while the lowest percentage was for the AA medium at 7.8%. However, twelve isolates were selected as representative for bacterial community during study interval. Based on the morphological, biochemical, physiological and enzymatic characteristics, the bacterial strains were described. Depending on the 16S rDNA gene sequence, three common antagonists were aligned as: Vibrio toranzoniae strain Vb 10.8, Ruegeria pelagia strain NBRC 102038 and Psychrobacter adeliensis strain DSM 15333. The interaction between these bacteria and S. costatum was studied. The growth of S. costatum was significantly lower whenever each bacterium was present as compared to axenic culture. More specifically, 30% (v/v) of the all tested bacteria showed the strongest algicidal activities, as all S. costatum cells were killed after two days. 10% of R. pelagia and P. adeliensis also showed significant algicidal activities within six days.

  17. Microbial Community of High Arsenic Groundwater in Agricultural Irrigation Area of Hetao Plain, Inner Mongolia.

    Science.gov (United States)

    Wang, Yanhong; Li, Ping; Jiang, Zhou; Sinkkonen, Aki; Wang, Shi; Tu, Jin; Wei, Dazhun; Dong, Hailiang; Wang, Yanxin

    2016-01-01

    Microbial communities can play important role in arsenic release in groundwater aquifers. To investigate the microbial communities in high arsenic groundwater aquifers in agricultural irrigation area, 17 groundwater samples with different arsenic concentrations were collected along the agricultural drainage channels of Hangjinhouqi County, Inner Mongolia and examined by illumina MiSeq sequencing approach targeting the V4 region of the 16S rRNA genes. Both principal component analysis and hierarchical clustering results indicated that these samples were divided into two groups (high and low arsenic groups) according to the variation of geochemical characteristics. Arsenic concentrations showed strongly positive correlations with [Formula: see text] and total organic carbon (TOC). Sequencing results revealed that a total of 329-2823 operational taxonomic units (OTUs) were observed at the 97% OTU level. Microbial richness and diversity of high arsenic groundwater samples along the drainage channels were lower than those of low arsenic groundwater samples but higher than those of high arsenic groundwaters from strongly reducing areas. The microbial community structure in groundwater along the drainage channels was different from those in strongly reducing arsenic-rich aquifers of Hetao Plain and other high arsenic groundwater aquifers including Bangladesh, West Bengal, and Vietnam. Acinetobacter and Pseudomonas dominated with high percentages in both high and low arsenic groundwaters. Alishewanella, Psychrobacter, Methylotenera, and Crenothrix showed relatively high abundances in high arsenic groundwater, while Rheinheimera and the unidentified OP3 were predominant populations in low arsenic groundwater. Archaeal populations displayed a low occurrence and mainly dominated by methanogens such as Methanocorpusculum and Methanospirillum. Microbial community compositions were different between high and low arsenic groundwater samples based on the results of principal

  18. Anti-biofilm activities from marine cold adapted bacteria against staphylococci and Pseudomonas aeruginosa

    Directory of Open Access Journals (Sweden)

    Rosanna ePapa

    2015-12-01

    Full Text Available Microbial biofilms have great negative impacts on the world’s economy and pose serious problems to industry, public health and medicine. The interest in the development of new approaches for the prevention and treatment of bacterial adhesion and biofilm formation has increased. Since, bacterial pathogens living in biofilm induce persistent chronic infections due to the resistance to antibiotics and host immune system. A viable approach should target adhesive properties without affecting bacterial vitality in order to avoid the appearance of resistant mutants. Many bacteria secrete anti-biofilm molecules that function in regulating biofilm architecture or mediating the release of cells from it during the dispersal stage of biofilm life cycle. Cold-adapted marine bacteria represent an untapped reservoir of biodiversity able to synthesize a broad range of bioactive compounds, including anti-biofilm molecules.The anti-biofilm activity of cell-free supernatants derived from sessile and planktonic cultures of cold-adapted bacteria belonging to Pseudoalteromonas, Psychrobacter and Psychromonas species were tested against Staphylococcus aureus, Staphylococcus epidermidis and Pseudomonas aeruginosa strains. Reported results demonstrate that we have selected supernatants, from cold-adapted marine bacteria, containing non-biocidal agents able to destabilize biofilm matrix of all tested pathogens without killing cells. A preliminary physico-chemical characterization of supernatants was also performed, and these analyses highlighted the presence of molecules of different nature that act by inhibiting biofilm formation. Some of them are also able to impair the initial attachment of the bacterial cells to the surface, thus likely containing molecules acting as anti-biofilm surfactant molecules.The described ability of cold-adapted bacteria to produce effective anti-biofilm molecules paves the way to further characterization of the most promising molecules

  19. Exploring the sources of bacterial spoilers in beefsteaks by culture-independent high-throughput sequencing.

    Directory of Open Access Journals (Sweden)

    Francesca De Filippis

    Full Text Available Microbial growth on meat to unacceptable levels contributes significantly to change meat structure, color and flavor and to cause meat spoilage. The types of microorganisms initially present in meat depend on several factors and multiple sources of contamination can be identified. The aims of this study were to evaluate the microbial diversity in beefsteaks before and after aerobic storage at 4°C and to investigate the sources of microbial contamination by examining the microbiota of carcasses wherefrom the steaks originated and of the processing environment where the beef was handled. Carcass, environmental (processing plant and meat samples were analyzed by culture-independent high-throughput sequencing of 16S rRNA gene amplicons. The microbiota of carcass swabs was very complex, including more than 600 operational taxonomic units (OTUs belonging to 15 different phyla. A significant association was found between beef microbiota and specific beef cuts (P<0.01 indicating that different cuts of the same carcass can influence the microbial contamination of beef. Despite the initially high complexity of the carcass microbiota, the steaks after aerobic storage at 4°C showed a dramatic decrease in microbial complexity. Pseudomonas sp. and Brochothrix thermosphacta were the main contaminants, and Acinetobacter, Psychrobacter and Enterobacteriaceae were also found. Comparing the relative abundance of OTUs in the different samples it was shown that abundant OTUs in beefsteaks after storage occurred in the corresponding carcass. However, the abundance of these same OTUs clearly increased in environmental samples taken in the processing plant suggesting that spoilage-associated microbial species originate from carcasses, they are carried to the processing environment where the meat is handled and there they become a resident microbiota. Such microbiota is then further spread on meat when it is handled and it represents the starting microbial association

  20. Culturable diversity and functional annotation of psychrotrophic bacteria from cold desert of Leh Ladakh (India).

    Science.gov (United States)

    Yadav, Ajar Nath; Sachan, Shashwati Ghosh; Verma, Priyanka; Tyagi, Satya Prakash; Kaushik, Rajeev; Saxena, Anil K

    2015-01-01

    To study culturable bacterial diversity under subzero temperature conditions and their possible functional annotation, soil and water samples from Leh Ladakh region were analysed. Ten different nutrient combinations were used to isolate the maximum possible culturable morphotypes. A total of 325 bacterial isolates were characterized employing 16S rDNA-Amplified Ribosomal DNA Restriction Analysis with three restriction endonucleases AluI, MspI and HaeIII, which led to formation of 23-40 groups for the different sites at 75 % similarity index, adding up to 175 groups. Phylogenetic analysis based on 16S rRNA gene sequencing led to the identification of 175 bacteria, grouped in four phyla, Firmicutes (54 %), Proteobacteria (28 %), Actinobacteria (16 %) and Bacteroidetes (3 %), and included 29 different genera with 57 distinct species. Overall 39 % of the total morphotypes belonged to the Bacillus and Bacillus derived genera (BBDG) followed by Pseudomonas (14 %), Arthrobacter (9 %), Exiguobacterium (8 %), Alishewanella (4 %), Brachybacterium, Providencia, Planococcus (3 %), Janthinobacterium, Sphingobacterium, Kocuria (2 %) and Aurantimonas, Citricoccus, Cellulosimicrobium, Brevundimonas, Desemzia, Flavobacterium, Klebsiella, Paracoccus, Psychrobacter, Sporosarcina, Staphylococcus, Sinobaca, Stenotrophomonas, Sanguibacter, Vibrio (1 %). The representative isolates from each cluster were screened for their plant growth promoting characteristics at low temperature (5-15 °C). Variations were observed among strains for production of ammonia, hydrogen cyanide, indole-3-acetic acid and siderophore, solubilisation of phosphate, 1-aminocyclopropane-1-carboxylate deaminase activity and biocontrol activity against Rhizoctonia solani and Macrophomina phaseolina. Cold adapted microbes may have application as inoculants and biocontrol agents in crops growing at high altitudes under cold climate condition.

  1. 叶用芥菜盐渍过程中微生物群落分析%Study on microbial community of salted leaf mustard(Brassica juncea) during their saline fermentation process

    Institute of Scientific and Technical Information of China (English)

    张奶英; 刘书亮; 罗松明; 杜晓华; 蒲彪

    2014-01-01

    采用聚合酶链式反应-变性梯度凝胶电泳(PCR-DGGE)技术,分析了叶用芥菜盐渍发酵过程中细菌和真菌的多样性.结果显示:芥菜在盐渍过程中的细菌主要有盐单胞菌(Halomonas sp.)、嗜盐乳酸菌(Marinilactibacilluspsychrotolerans)、泡菜乳酸菌(Lactobacillus kimchii)、色盐杆菌属细菌(Chromohalobacter sp.)、不可培养细菌(Unculturedbacterium)和不可培养盐单胞菌(Uncultured Halomonas sp.),另外嗜冷杆菌(Psychrobacter sp.)在盐渍初期被检出;芥菜在盐渍过程中的真菌主要有酿酒酵母(Saccharomyces cerevisiae)、粘性红圆酵母(Rhodotorula mucilaginosa)、黑曲霉(Aspergillus niger)、汉逊德巴利酵母(Debaryomyces hansenii)、假丝酵母(Candidasp.)及不可培养真菌(Uncuhuredfungus);其中盐单胞菌、嗜盐乳酸菌、酿酒酵母、粘性红圆酵母存在于整个盐渍过程中,这四种微生物的丰度随盐渍时间的延长并无明显变化,是盐渍叶用芥菜中的主要优势菌.

  2. Perlucidibaca piscinae gen. nov., sp. nov., a freshwater bacterium belonging to the family Moraxellaceae.

    Science.gov (United States)

    Song, Jaeho; Choo, Yoe-Jin; Cho, Jang-Cheon

    2008-01-01

    A freshwater bacterium, designated IMCC1704(T), was isolated from a eutrophic pond. The strain was Gram-negative, oxidase-positive, catalase-negative, chemoheterotrophic and facultatively aerobic with cells that were motile rods with a single polar flagellum. Based on 16S rRNA gene sequence similarity analyses, the novel strain was most closely related to the genera Alkanindiges (91.7%), Acinetobacter (89.0-91.2%), Moraxella (87.9-90.1%), Psychrobacter (87.2-89.5%) and Enhydrobacter (87.8%). Phylogenetic trees generated using 16S rRNA gene sequences showed that the novel isolate belonged to the family Moraxellaceae of the class Gammaproteobacteria and formed a distinct phyletic lineage within the family. The DNA G+C content of the strain was 63.1 mol% and the predominant constituents of the cellular fatty acids were C(16:1)omega7c and/or iso-C(15:0) 2-OH (21.2%), C(18:1)omega7c (12.8%) and C(12:0) 3-OH (12.3%). These chemotaxonomic properties, together with several phenotypic characteristics, differentiated the novel strain from other members of the family Moraxellaceae. From the taxonomic data, which revealed the distant relationship of the new strain to the related genera, the strain should be classified as a novel genus and species in the family Moraxellaceae, for which the name Perlucidibaca piscinae gen. nov., sp. nov. is proposed. The type strain of Perlucidibaca piscinae sp. nov. is IMCC1704(T) (=KCCM 42363(T)=NBRC 102354(T)).

  3. Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

    Science.gov (United States)

    Apprill, Amy; Robbins, Jooke; Eren, A Murat; Pack, Adam A; Reveillaud, Julie; Mattila, David; Moore, Michael; Niemeyer, Misty; Moore, Kathleen M T; Mincer, Tracy J

    2014-01-01

    Microbes are now well regarded for their important role in mammalian health. The microbiology of skin--a unique interface between the host and environment--is a major research focus in human health and skin disorders, but is less explored in other mammals. Here, we report on a cross-population study of the skin-associated bacterial community of humpback whales (Megaptera novaeangliae), and examine the potential for a core bacterial community and its variability with host (endogenous) or geographic/environmental (exogenous) specific factors. Skin biopsies or freshly sloughed skin from 56 individuals were sampled from populations in the North Atlantic, North Pacific and South Pacific oceans and bacteria were characterized using 454 pyrosequencing of SSU rRNA genes. Phylogenetic and statistical analyses revealed the ubiquity and abundance of bacteria belonging to the Flavobacteria genus Tenacibaculum and the Gammaproteobacteria genus Psychrobacter across the whale populations. Scanning electron microscopy of skin indicated that microbial cells colonize the skin surface. Despite the ubiquity of Tenacibaculum and Psychrobater spp., the relative composition of the skin-bacterial community differed significantly by geographic area as well as metabolic state of the animals (feeding versus starving during migration and breeding), suggesting that both exogenous and endogenous factors may play a role in influencing the skin-bacteria. Further, characteristics of the skin bacterial community from these free-swimming individuals were assembled and compared to two entangled and three dead individuals, revealing a decrease in the central or core bacterial community members (Tenacibaculum and Psychrobater spp.), as well as the emergence of potential pathogens in the latter cases. This is the first discovery of a cross-population, shared skin bacterial community. This research suggests that the skin bacteria may be connected to humpback health and immunity and could possibly serve

  4. The role of coastal fog in increased viability of marine microbial aerosols

    Science.gov (United States)

    Dueker, M.; O'Mullan, G. D.; Weathers, K. C.; Juhl, A. R.; Uriarte, M.

    2011-12-01

    Microbes in the atmosphere (microbial aerosols) play an important role in climate and provide an ecological and biogeochemical connection between oceanic, atmospheric, and terrestrial environments. Despite the ubiquity of these bacteria (concentration estimates range from 1 x 10^4 to 6 x 10^5 cells m-3), much is still being learned about their source, viability, and interactions with climatic controls. They can be attached to ambient aerosol particles or exist singly in the air. They affect climate by serving as ice, cloud, and fog nucleators, and have the metabolic potential to alter atmospheric chemistry. Fog presence in particular has been shown to greatly increase the deposition of viable microbial aerosols in both urban and coastal environments, but the mechanisms behind this are not fully understood. To address this gap, we examined the diversity of culturable microbial aerosols from a relatively pristine coastal environment in Maine (USA) and determined the effect of fog presence on viability and community composition of microbial aerosols. 16S rRNA sequencing of culturable ocean surface bacteria and depositing microbial aerosols (under clear and foggy conditions) resulted in the detection of 31 bacterial genera, with 5 dominant genera (Vibrio, Bacillus, Pseudoalteromonas, Psychrobacter, Salinibacterium) making up 66% of all sequences. Seventy-five percent of the viable microbial aerosols falling out under foggy conditions were most similar to GenBank-published sequences detected in marine environments. The fog and ocean surface sequence libraries were significantly more similar in microbial community composition than clear (non-foggy) and ocean surface libraries. These findings support a dual role for fog in enhancing the fallout of viable marine microbial aerosols via increased gravitational settling rates and decreased aerosolization stress on the organisms. The dominant presence of marine bacteria in coastal microbial aerosols provides a strong case for

  5. Microbial Community of High Arsenic Groundwater in Agricultural Irrigation Area of Hetao Plain, Inner Mongolia

    Science.gov (United States)

    Wang, Yanhong; Li, Ping; Jiang, Zhou; Sinkkonen, Aki; Wang, Shi; Tu, Jin; Wei, Dazhun; Dong, Hailiang; Wang, Yanxin

    2016-01-01

    Microbial communities can play important role in arsenic release in groundwater aquifers. To investigate the microbial communities in high arsenic groundwater aquifers in agricultural irrigation area, 17 groundwater samples with different arsenic concentrations were collected along the agricultural drainage channels of Hangjinhouqi County, Inner Mongolia and examined by illumina MiSeq sequencing approach targeting the V4 region of the 16S rRNA genes. Both principal component analysis and hierarchical clustering results indicated that these samples were divided into two groups (high and low arsenic groups) according to the variation of geochemical characteristics. Arsenic concentrations showed strongly positive correlations with NH4+ and total organic carbon (TOC). Sequencing results revealed that a total of 329–2823 operational taxonomic units (OTUs) were observed at the 97% OTU level. Microbial richness and diversity of high arsenic groundwater samples along the drainage channels were lower than those of low arsenic groundwater samples but higher than those of high arsenic groundwaters from strongly reducing areas. The microbial community structure in groundwater along the drainage channels was different from those in strongly reducing arsenic-rich aquifers of Hetao Plain and other high arsenic groundwater aquifers including Bangladesh, West Bengal, and Vietnam. Acinetobacter and Pseudomonas dominated with high percentages in both high and low arsenic groundwaters. Alishewanella, Psychrobacter, Methylotenera, and Crenothrix showed relatively high abundances in high arsenic groundwater, while Rheinheimera and the unidentified OP3 were predominant populations in low arsenic groundwater. Archaeal populations displayed a low occurrence and mainly dominated by methanogens such as Methanocorpusculum and Methanospirillum. Microbial community compositions were different between high and low arsenic groundwater samples based on the results of principal coordinate

  6. Microbiological changes, shelf life and identification of initial and spoilage microbiota of sea bream fillets stored under various conditions using 16S rRNA gene analysis.

    Science.gov (United States)

    Parlapani, Foteini F; Kormas, Konstantinos Ar; Boziaris, Ioannis S

    2015-09-01

    Sea bream fillets are one of the most important value-added products of the seafood market. Fresh seafood spoils mainly owing to bacterial action. In this study an exploration of initial and spoilage microbiota of sea bream fillets stored under air and commercial modified atmosphere packaging (MAP) at 0 and 5 °C was conducted by 16S rRNA gene sequence analysis of isolates grown on plates. Sensory evaluation and enumeration of total viable counts and spoilage microorganisms were also conducted to determine shelf life and bacterial growth respectively. Different temperatures and atmospheres affected growth and synthesis of spoilage microbiota as well as shelf life. Shelf life under air at 0 and 5 °C was 14 and 5 days respectively, while under MAP it was 20 and 8 days respectively. Initial microbiota were dominated by Pseudomonas fluorescens, Psychrobacter and Macrococcus caseolyticus. Different temperatures and atmospheres affected the synthesis of spoilage microbiota. At the end of shelf life, different phylotypes of Pseudomonas closely related to Pseudomonas fragi were found to dominate in most cases, while Pseudomonas veronii dominated in fillets under MAP at 0 °C. Furthermore, in fillets under MAP at 5 °C, new dominant species such as Carnobacterium maltaromaticum, Carnobacterium divergens and Vagococcus fluvialis were revealed. Different temperature and atmospheric conditions affected bacterial growth, shelf life and the synthesis of spoilage microbiota. Molecular identification revealed species and strains of microorganisms that have not been reported before for sea bream fillets stored under various conditions, thus providing valuable information regarding microbiological spoilage. © 2014 Society of Chemical Industry.

  7. 冷海水保藏下鲐鱼(Pneumatophorus japonicus)菌相变化规律及优势腐败菌的分离鉴定%Microflora Composition Variation in Mackerel (Pneumatophorus japonicas) Stored in Refrigerated Seawater, and Isolation and Identification of the Dominant Spoilage Bacteria

    Institute of Scientific and Technical Information of China (English)

    郑振霄; 周聃; 冯俊丽; 金仁耀; 戴志远

    2016-01-01

    以冷海水保鲜的鲐鱼为研究对象,通过选择性生培养基和16S rDNA序列分析法探究其在冷海水保鲜过程中的菌相变化,确定了鲐鱼在冷海水保鲜条件下的优势腐败菌,并通过MEGA5.2软件构建了贮藏末期代表菌株的系统发育树.结果表明:冷海水保鲜鲐鱼样品在贮藏初期(第0d)的微生物比较复杂,优势种群是假单胞菌属(Pseudomonas sp.)和嗜冷菌属(Psychrobacter sp.),还有少量的类芽孢杆菌属(Paenibacillus sp.)、希瓦氏菌属(Shewanella sp.)、蜡状芽孢杆菌(Bacillus anthracis)、枯草芽孢杆菌属(Brevibacterium sp.);随着贮藏时间的延长,鲐鱼样品中的菌相逐渐变的单一,假单胞菌属迅速下降,希瓦氏菌属迅速增加;贮藏末期希瓦氏菌属和肠杆菌属(Enterobacter sp.)的比例迅速增加,其中希瓦氏菌属呈上升趋势且到贮藏后期数量占绝对优势,被确定为鲐鱼冷海水保鲜条件下的优势腐败菌.

  8. Anti-Biofilm Activities from Marine Cold Adapted Bacteria Against Staphylococci and Pseudomonas aeruginosa.

    Science.gov (United States)

    Papa, Rosanna; Selan, Laura; Parrilli, Ermenegilda; Tilotta, Marco; Sannino, Filomena; Feller, Georges; Tutino, Maria L; Artini, Marco

    2015-01-01

    Microbial biofilms have great negative impacts on the world's economy and pose serious problems to industry, public health and medicine. The interest in the development of new approaches for the prevention and treatment of bacterial adhesion and biofilm formation has increased. Since, bacterial pathogens living in biofilm induce persistent chronic infections due to the resistance to antibiotics and host immune system. A viable approach should target adhesive properties without affecting bacterial vitality in order to avoid the appearance of resistant mutants. Many bacteria secrete anti-biofilm molecules that function in regulating biofilm architecture or mediating the release of cells from it during the dispersal stage of biofilm life cycle. Cold-adapted marine bacteria represent an untapped reservoir of biodiversity able to synthesize a broad range of bioactive compounds, including anti-biofilm molecules. The anti-biofilm activity of cell-free supernatants derived from sessile and planktonic cultures of cold-adapted bacteria belonging to Pseudoalteromonas, Psychrobacter, and Psychromonas species were tested against Staphylococcus aureus, Staphylococcus epidermidis, and Pseudomonas aeruginosa strains. Reported results demonstrate that we have selected supernatants, from cold-adapted marine bacteria, containing non-biocidal agents able to destabilize biofilm matrix of all tested pathogens without killing cells. A preliminary physico-chemical characterization of supernatants was also performed, and these analyses highlighted the presence of molecules of different nature that act by inhibiting biofilm formation. Some of them are also able to impair the initial attachment of the bacterial cells to the surface, thus likely containing molecules acting as anti-biofilm surfactant molecules. The described ability of cold-adapted bacteria to produce effective anti-biofilm molecules paves the way to further characterization of the most promising molecules and to test their

  9. Characterization of bacterial communities associating with larval development of Yesso Scallop ( Patinopecten yessoensisis Jay, 1857) by high-throughput sequencing

    Science.gov (United States)

    Sun, Xueying; Liu, Jichen; Li, Ming; Zhao, Xuewei; Liang, Jun; Sun, Pihai; Ma, Yuexin

    2016-12-01

    Bacterial community presumably plays an essential role in inhibiting pathogen colonization and maintaining the health of scallop larvae, but limiting data are available for Yesso scallop ( Patinopecten yessoensisis Jay, 1857) larval development stages. The aim of this study was to characterize and compare the bacterial communities associating with Yesso scallop larval development at fertilized egg S1, trochophora S2, D-shaped larvae S3, umbo larvae S4, and juvenile scallop S5 stages by Illumina high-throughput sequencing. Genomic DNA was extracted from the larvae and their associating bactera, and a gene segment covering V3-V4 region of 16S rRNA gene was amplified and sequenced using an Illumina Miseq sequencer. Overall, 106760 qualified sequences with an average length of 449 bp were obtained. Sequences were compared with those retrieved from 16S rRNA gene databases, and 4 phyla, 7 classes, 15 orders, 21 families, 31 genera were identified. Proteobacteria was predominant phylum, accounting for more than 99%, at all 5 larval development stages. At genus level, Pseudomonas was dominant at stages S1 (80.60%), S2 (87.77%) and S5 (68.71%), followed by Photobacterium (17.06%) and Aeromonas (1.64%) at stage S1, Serratia (6.94%), Stenotrophomonas (3.08%) and Acinetobacter (1.2%) at stage S2, Shewanella (25.95%) and Pseudoalteromonas (4.57%) at stage S5. Moreover, genus Pseudoalteromonas became dominant at stages S3 (44.85%) and S4 (56.02%), followed by Photobacterium (29.82%), Pseudomonas (11.86%), Aliivibrio (8.60%) and Shewanella (3.39%) at stage S3, Pseudomonas (18.16%), Aliivibrio (14.29%), Shewanella (4.11%), Psychromonas (4.04%) and Psychrobacter (1.81%) at stage S4. From the results, we concluded that the bacterial community changed significantly at different development stages of Yesso Scallop larvae.

  10. Effect of Macondo Prospect 252 Oil on Microbiota Associated with Pelagic Sargassum in the Northern Gulf of Mexico.

    Science.gov (United States)

    Torralba, Manolito G; Franks, James S; Gomez, Andres; Yooseph, Shibu; Nelson, Karen E; Grimes, D Jay

    2017-01-01

    The environmental impact of major oil spills on marine microorganisms has yet to be thoroughly investigated using molecular biology techniques. The Deepwater Horizon (DWH) drilling rig explosion of 2010 affected an approximately 176,000 km(2) surface area of the Gulf of Mexico (GOM) when an estimated 210 million gallons of oil from the Macondo Prospect spilled into the environment. Pelagic Sargassum, a complex of two surface drifting species (Sargassum natans and Sargassum fluitans) of marine brown macroalgae and a critically important habitat in the GOM ecosystem, was suffused by Macondo Prospect 252 oil released during the DWH event. Using 16S rRNA PCR and Roche 454 pyrosequencing, the effect of the oil on the bacterial population associated with pelagic Sargassum and contiguous waters was examined by comparing sequence data generated from samples collected from oiled and non-oiled locations in the northern GOM. Sequence data showed similar microbial composition in Sargassum regardless of exposure to oil primarily dominated by five phyla; Proteobacteria, Bacteroidetes, Actinobacteria, Verrucomicrobia, and unclassified bacteria. The microbial composition in water samples was significantly less diverse than for Sargassum and consisted primarily of Proteobacteria, Firmicutes, and Bacteroidetes. Due to the evenly distributed abundance of microbial species on oiled and non-oiled pelagic Sargassum, study findings indicate that DWH spilled oil had minimal effect on the composition and diversity of the microbial community associated with Sargassum and contiguous waters. However, higher abundances of Sulfitobacter and one species of Psychrobacter were found in oiled water samples when compared to non-oiled water samples indicating some effect of DHW oil in the microbial composition of seawater. Though there are a number of marine studies using molecular biology approaches, this is the first molecular examination of the impact of the DWH oil spill on bacterial communities

  11. Mercury-mediated cross-resistance to tellurite in Pseudomonas spp. isolated from the Chilean Antarctic territory.

    Science.gov (United States)

    Rodríguez-Rojas, F; Díaz-Vásquez, W; Undabarrena, A; Muñoz-Díaz, P; Arenas, F; Vásquez, C

    2016-01-01

    Mercury salts and tellurite are among the most toxic compounds for microorganisms on Earth. Bacterial mercury resistance is established mainly via mercury reduction by the mer operon system. However, specific mechanisms underlying tellurite resistance are unknown to date. To identify new mechanisms for tellurite detoxification we demonstrate that mercury resistance mechanisms can trigger cross-protection against tellurite to a group of Pseudomonads isolated from the Chilean Antarctic territory. Sequencing of 16S rRNA of four isolated strains resulted in the identification of three Pseudomonads (ATH-5, ATH-41 and ATH-43) and a Psychrobacter (ATH-62) bacteria species. Phylogenetic analysis showed that ATH strains were related to other species previously isolated from cold aquatic and soil environments. Furthermore, the identified merA genes were related to merA sequences belonging to transposons commonly found in isolated bacteria from mercury contaminated sites. Pseudomonas ATH isolates exhibited increased tellurite resistance only in the presence of mercury, especially ATH-43. Determination of the growth curves, minimal inhibitory concentrations and growth inhibition zones showed different tellurite cross-resistance of the ATH strains and suggested a correlation with the presence of a mer operon. On the other hand, reactive oxygen species levels decreased while the thiol content increased when the isolates were grown in the presence of both toxicants. Finally, qPCR determinations of merA, merC and rpoS transcripts from ATH-43 showed a synergic expression pattern upon combined tellurite and mercury treatments. Altogether, the results suggest that mercury could trigger a cell response that confers mercury and tellurite resistance, and that the underlying mechanism participates in protection against oxidative damage.

  12. Humpback Whale Populations Share a Core Skin Bacterial Community: Towards a Health Index for Marine Mammals?

    Science.gov (United States)

    Apprill, Amy; Robbins, Jooke; Eren, A. Murat; Pack, Adam A.; Reveillaud, Julie; Mattila, David; Moore, Michael; Niemeyer, Misty; Moore, Kathleen M. T.; Mincer, Tracy J.

    2014-01-01

    Microbes are now well regarded for their important role in mammalian health. The microbiology of skin – a unique interface between the host and environment - is a major research focus in human health and skin disorders, but is less explored in other mammals. Here, we report on a cross-population study of the skin-associated bacterial community of humpback whales (Megaptera novaeangliae), and examine the potential for a core bacterial community and its variability with host (endogenous) or geographic/environmental (exogenous) specific factors. Skin biopsies or freshly sloughed skin from 56 individuals were sampled from populations in the North Atlantic, North Pacific and South Pacific oceans and bacteria were characterized using 454 pyrosequencing of SSU rRNA genes. Phylogenetic and statistical analyses revealed the ubiquity and abundance of bacteria belonging to the Flavobacteria genus Tenacibaculum and the Gammaproteobacteria genus Psychrobacter across the whale populations. Scanning electron microscopy of skin indicated that microbial cells colonize the skin surface. Despite the ubiquity of Tenacibaculum and Psychrobater spp., the relative composition of the skin-bacterial community differed significantly by geographic area as well as metabolic state of the animals (feeding versus starving during migration and breeding), suggesting that both exogenous and endogenous factors may play a role in influencing the skin-bacteria. Further, characteristics of the skin bacterial community from these free-swimming individuals were assembled and compared to two entangled and three dead individuals, revealing a decrease in the central or core bacterial community members (Tenacibaculum and Psychrobater spp.), as well as the emergence of potential pathogens in the latter cases. This is the first discovery of a cross-population, shared skin bacterial community. This research suggests that the skin bacteria may be connected to humpback health and immunity and could possibly

  13. Serpentine bacteria influence metal translocation and bioconcentration of Brassica juncea and Ricinus communis grown in multi-metal polluted soils

    Directory of Open Access Journals (Sweden)

    Ying eMa

    2015-01-01

    Full Text Available The aim of this study was to assess the effects of inoculation of rhizosphere or endophytic bacteria (Psychrobacter sp. SRS8 and Pseudomonas sp. A3R3, respectively isolated from a serpentine environment on the plant growth and the translocation and accumulation of Ni, Zn and Fe by Brassica juncea and Ricinus communis on a multi-metal polluted serpentine soil (SS. Field collected SS was diluted to 0, 25, 50 and 75% with pristine soil in order to obtain a range of heavy metal concentrations and used in microcosm experiments. Regardless of inoculation with bacteria, the biomass of both plant species decreased with increase of the proportion of SS. Inoculation of plants with bacteria significantly increased the plant biomass and the heavy metal accumulation compared with non-inoculated control in the presence of different proportion of SS, which was attributed to the production of plant growth promoting and/or metal mobilizing metabolites by bacteria. However, SRS8 showed a maximum increase in the biomass of the test plants grown even in the treatment of 75% SS. In turn, A3R3 showed maximum effects on the accumulation of heavy metals in both plants. Regardless of inoculation of bacteria and proportion of SS, both plant species exhibited low values of bioconcentration factor (<1 for Ni and Fe. The inoculation of both bacterial strains significantly increased the translocation factor (TF of Ni while decreasing the TF of Zn in both plant species. Besides this contrasting effect, the TFs of all metals were < 1, indicating that all studied bacteria-plant combinations are suitable for phytostabilization. This study demonstrates that the bacterial isolates A3R3 and SRS8 improved the growth of B. juncea and R. communis in SS soils and have a great potential to be used as inoculants in phytostabilization scenarios of multi-metal contaminated soils.

  14. Microbial Community Dynamics During Biogas Slurry and Cow Manure Compost

    Institute of Scientific and Technical Information of China (English)

    ZHAO Hong-yan; LI Jie; LIU Jing-jing; L Yu-cai; WANG Xiao-fen; CUI Zong-jun

    2013-01-01

    This study evaluated the microbial community dynamics and maturation time of two compost systems: biogas slurry compost and cow manure compost, with the aim of evaluating the potential utility of a biogas slurry compost system. Denaturing gradient gel electrophoresis (DGGE), gene clone library, temperature, C/N ratio, and the germination index were employed for the investigation, cow manure compost was used as the control. Results showed that the basic strip and dominant strips of the DGGE bands for biogas slurry compost were similar to those of cow manure compost, but the brightness of the respective strips for each system were different. Shannon-Weaver indices of the two compost systems differed, possessing only 22%similarity in the primary and maturity stages of the compost process. Using bacterial 16S rRNA gene clone library analysis, 88 bacterial clones were detected. Further, 18 and 13 operational taxonomic units (OTUs) were present in biogas slurry and cow manure compost, respectively. The 18 OTUs of the biogas slurry compost belonged to nine bacterial genera, of which the dominant strains were Bacillus sp. and Carnobacterium sp.;the 13 OTUs of the cow manure compost belonged to eight bacterial genera, of which the dominant strains were Psychrobacter sp., Pseudomonas sp., and Clostridium sp. Results demonstrated that the duration of the thermophilic phase (more than 50°C) for biogas slurry compost was 8 d less than the according duration for cow manure compost, and the maturation times for biogas slurry and cow manure compost were 45 and 60 d, respectively. It is an effective biogas slurry assimilate technology by application of biogas slurry as nitrogen additives in the manufacture of organic fertilizer.

  15. Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

    Directory of Open Access Journals (Sweden)

    Amy Apprill

    Full Text Available Microbes are now well regarded for their important role in mammalian health. The microbiology of skin--a unique interface between the host and environment--is a major research focus in human health and skin disorders, but is less explored in other mammals. Here, we report on a cross-population study of the skin-associated bacterial community of humpback whales (Megaptera novaeangliae, and examine the potential for a core bacterial community and its variability with host (endogenous or geographic/environmental (exogenous specific factors. Skin biopsies or freshly sloughed skin from 56 individuals were sampled from populations in the North Atlantic, North Pacific and South Pacific oceans and bacteria were characterized using 454 pyrosequencing of SSU rRNA genes. Phylogenetic and statistical analyses revealed the ubiquity and abundance of bacteria belonging to the Flavobacteria genus Tenacibaculum and the Gammaproteobacteria genus Psychrobacter across the whale populations. Scanning electron microscopy of skin indicated that microbial cells colonize the skin surface. Despite the ubiquity of Tenacibaculum and Psychrobater spp., the relative composition of the skin-bacterial community differed significantly by geographic area as well as metabolic state of the animals (feeding versus starving during migration and breeding, suggesting that both exogenous and endogenous factors may play a role in influencing the skin-bacteria. Further, characteristics of the skin bacterial community from these free-swimming individuals were assembled and compared to two entangled and three dead individuals, revealing a decrease in the central or core bacterial community members (Tenacibaculum and Psychrobater spp., as well as the emergence of potential pathogens in the latter cases. This is the first discovery of a cross-population, shared skin bacterial community. This research suggests that the skin bacteria may be connected to humpback health and immunity and could

  16. Screening and Phylogenetic Analysis of Antibiotics Broducing Bacteria from Eastern China Sea%东海海洋有抗菌活性细菌的筛选及系统发育分析

    Institute of Scientific and Technical Information of China (English)

    王莹; 吴根福

    2007-01-01

    为了筛选开发新的抗生素,从海水、海泥以及刺鲳、鳗鱼、黄鱼、安康鱼、鲽鱼、马头鱼的鳃和胃肠道中分离得到195株海洋细菌,以金黄色葡萄球菌、大肠杆菌、枯草芽孢杆菌、黑曲霉和啤酒酵母作为指示菌,用滤纸片法定性测定它们的抗菌活性,筛选到抗菌活性物质产生菌22株.对其中6个抗菌活性较强的菌株进行16S rDNA序列分析,结果显示,它们分别是克氏菌属的Kocuria rhizophila、葡萄球菌属的Staphylococcus saprophyticus、芽孢杆菌属的Bacillus sphaericus和Bacillus thuringiensis、冷杆菌属的Psychrobacter faecalis和变形菌属的Proteus penneri.系统发育分析表明这6个菌株归于3个类群:1个为高(G+C)%的革兰阳性菌;3个为低(G+C)%的革兰阳性菌;另2个为γ-变形菌.

  17. Exploring the sources of bacterial spoilers in beefsteaks by culture-independent high-throughput sequencing.

    Science.gov (United States)

    De Filippis, Francesca; La Storia, Antonietta; Villani, Francesco; Ercolini, Danilo

    2013-01-01

    Microbial growth on meat to unacceptable levels contributes significantly to change meat structure, color and flavor and to cause meat spoilage. The types of microorganisms initially present in meat depend on several factors and multiple sources of contamination can be identified. The aims of this study were to evaluate the microbial diversity in beefsteaks before and after aerobic storage at 4°C and to investigate the sources of microbial contamination by examining the microbiota of carcasses wherefrom the steaks originated and of the processing environment where the beef was handled. Carcass, environmental (processing plant) and meat samples were analyzed by culture-independent high-throughput sequencing of 16S rRNA gene amplicons. The microbiota of carcass swabs was very complex, including more than 600 operational taxonomic units (OTUs) belonging to 15 different phyla. A significant association was found between beef microbiota and specific beef cuts (PPseudomonas sp. and Brochothrix thermosphacta were the main contaminants, and Acinetobacter, Psychrobacter and Enterobacteriaceae were also found. Comparing the relative abundance of OTUs in the different samples it was shown that abundant OTUs in beefsteaks after storage occurred in the corresponding carcass. However, the abundance of these same OTUs clearly increased in environmental samples taken in the processing plant suggesting that spoilage-associated microbial species originate from carcasses, they are carried to the processing environment where the meat is handled and there they become a resident microbiota. Such microbiota is then further spread on meat when it is handled and it represents the starting microbial association wherefrom the most efficiently growing microbial species take over during storage and can cause spoilage.

  18. Variations in gut microbiota and fecal metabolic phenotype associated with depression by 16S rRNA gene sequencing and LC/MS-based metabolomics.

    Science.gov (United States)

    Yu, Meng; Jia, Hongmei; Zhou, Chao; Yang, Yong; Zhao, Yang; Yang, Maohua; Zou, Zhongmei

    2017-05-10

    As a prevalent, life-threatening and highly recurrent psychiatric illness, depression is characterized by a wide range of pathological changes; however, its etiology remains incompletely understood. Accumulating evidence supports that gut microbiota affects not only gastrointestinal physiology but also central nervous system (CNS) function and behavior through the microbiota-gut-brain axis. To assess the impact of gut microbiota on fecal metabolic phenotype in depressive conditions, an integrated approach of 16S rRNA gene sequencing combined with ultra high-performance liquid chromatography-mass spectrometry (UHPLC-MS) based metabolomics was performed in chronic variable stress (CVS)-induced depression rat model. Interestingly, depression led to significant gut microbiota changes, at the phylum and genus levels in rats treated with CVS compared to controls. The relative abundances of the bacterial genera Marvinbryantia, Corynebacterium, Psychrobacter, Christensenella, Lactobacillus, Peptostreptococcaceae incertae sedis, Anaerovorax, Clostridiales incertae sedis and Coprococcus were significantly decreased, whereas Candidatus Arthromitus and Oscillibacter were markedly increased in model rats compared with normal controls. Meanwhile, distinct changes in fecal metabolic phenotype of depressive rats were also found, including lower levels of amino acids, and fatty acids, and higher amounts of bile acids, hypoxanthine and stercobilins. Moreover, there were substantial associations of perturbed gut microbiota genera with the altered fecal metabolites, especially compounds involved in the metabolism of tryptophan and bile acids. These results showed that the gut microbiota was altered in association with fecal metabolism in depressive conditions. These findings suggest that the 16S rRNA gene sequencing and LC-MS based metabolomics approach can be further applied to assess pathogenesis of depression. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. AcEST: BP919054 [AcEST

    Lifescience Database Archive (English)

    Full Text Available inition sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii Align length 75 Score (b...s: (bits) Value sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas ... 89 1e-17 sp|P12860|G3PB_...man T-cell leukemia virus 1... 30 9.0 >sp|A6Q0K5|CP12_CHLRE Calvin cycle protein CP12 OS=Chlamydomonas reinh...60_SPIOL CP12 OS=Spinacia oleracea PE=2 SV=1 84 3e-15 tr|A1YQX6|A1YQX6_VOLCA Calvin cycle protein CP12 OS=Vo

  20. Derivation of myoepithelial progenitor cells from bipotent mammary stem/progenitor cells.

    Directory of Open Access Journals (Sweden)

    Xiangshan Zhao

    Full Text Available There is increasing evidence that breast and other cancers originate from and are maintained by a small fraction of stem/progenitor cells with self-renewal properties. Recent molecular profiling has identified six major subtypes of breast cancer: basal-like, ErbB2-overexpressing, normal breast epithelial-like, luminal A and B, and claudin-low subtypes. To help understand the relationship among mammary stem/progenitor cells and breast cancer subtypes, we have recently derived distinct hTERT-immortalized human mammary stem/progenitor cell lines: a K5(+/K19(- type, and a K5(+/K19(+ type. Under specific culture conditions, bipotent K5(+/K19(- stem/progenitor cells differentiated into stable clonal populations that were K5(-/K19(- and exhibit self-renewal and unipotent myoepithelial differentiation potential in contrast to the parental K5(+/K19(- cells which are bipotent. These K5(-/K19(- cells function as myoepithelial progenitor cells and constitutively express markers of an epithelial to mesenchymal transition (EMT and show high invasive and migratory abilities. In addition, these cells express a microarray signature of claudin-low breast cancers. The EMT characteristics of an un-transformed unipotent mammary myoepithelial progenitor cells together with claudin-low signature suggests that the claudin-low breast cancer subtype may arise from myoepithelial lineage committed progenitors. Availability of immortal MPCs should allow a more definitive analysis of their potential to give rise to claudin-low breast cancer subtype and facilitate biological and molecular/biochemical studies of this disease.

  1. Threshold photodetachment in a repulsive potential

    CERN Document Server

    Lindahl, Anton O; Hultgren, Hannes; Kiyan, Igor Yu; Pegg, David J; Walter, C Wesley; Hanstorp, Dag; 10.1103/PhysRevLett.108.033004

    2012-01-01

    We report on the first experimental observation of a new threshold behavior observed in the 5g partial channel in photodetachment of K-. It arises from the repulsive polarization interaction between the detached electron and the residual K(5g) atom, which has a large negative dipole polarizability. In order to account for the observation in the K(5g) channel, we have developed a semiclassical model that predicts an exponential energy dependence for the cross section. The measurements were made with collinear laser-ion beams and a resonance ionization detection scheme.

  2. Secretion of IFN-γ but Not IL-17 by CD1d-Restricted NKT Cells Enhances Rejection of Skin Grafts Expressing Epithelial Cell-Derived Antigen

    OpenAIRE

    Mattarollo, Stephen R; Yong, Michelle; Tan, Lieven; Frazer, Ian H; Leggatt, Graham R

    2010-01-01

    NKT cells are key regulators of autoimmunity, tumor immune surveillance, and the immune response to pathogens. The role of NKT cells in regulating adaptive immunity to cutaneous Ags is largely unknown. This study explores the role of CD1d-restricted NKT cells in cross-priming of CD8 effector T cells to OVA expressed in epithelial keratinocytes (K5mOVA transgenic mouse). In a skin grafting model, we show that NKT cells enhance the rejection of K5mOVA skin grafts by promoting generation of OVA-...

  3. The locally connected compact metric spaces embeddable in the plane

    DEFF Research Database (Denmark)

    Thomassen, Carsten

    2004-01-01

    We prove that a 2-connected, locally connected, compact topological space M is homeomorphic to a subset of the 2-sphere if and only if M is metrizable and contains none of the Kuratowski graphs K-5 and K-3,K-3.......We prove that a 2-connected, locally connected, compact topological space M is homeomorphic to a subset of the 2-sphere if and only if M is metrizable and contains none of the Kuratowski graphs K-5 and K-3,K-3....

  4. Materials Research Society Symposium on the Electrical, Optical and Magnetic Properties of Organic Solid State Materials Held in Boston Massachusetts on 27 November-2 December 1989

    Science.gov (United States)

    1989-12-01

    THIN A TECHNIQUE FOR BRAZING ALUMINUM FILM OF POLYIMIDE, Yoshiro Akai, Mariko NITRIDE SUBSTRATES, M. Grant Norton, Cornell Ishino, Yasunari Okaoto...Yoshiro Akagi, Mariko Ishino, Yasunari Okamoto temperature thermal conductivity is inhibited Hiroshi Taniguchi, KohJi Ooka, Yoshiharu Nakajima...NISHIWAXI, R.. 147.247 OKANO. YOSHINXIi, 08.3, 013.4 PAJEVIC. S., T7.26 M3, 143.1, 145.9, 17.59, 447.185, NINA, K., K5.11 OKAOTO, YASUNARI , K5.12 PAJOT

  5. [Phylogenetic diversity of culturable bacteria in the ancient salt deposits of the Yipinglang Salt Mine, P. R. China].

    Science.gov (United States)

    Chen, Yi-guang; Li, Hui-ming; Li, Qin-yuan; Chen, Wei; Cui, Xiao-long

    2007-08-01

    The microbial diversity of cultivable bacteria, isolated from the ancient salt deposits from the Yipinglang Salt Mine (YPL) in the Yunnan Province, P. R. China,was investigated by using conventional culture-dependent method and phylogenetic analyses based on 16S rRNA gene sequence comparisons. 38 bacteria strains were isolated from the brine, halite and saline soil samples on MBA (marine broth agar 2216, Difco) and ISP 2 (International Streotomyces Project medium 2) media supplemented with 0.5-3.5 mol/L NaCl. The genomic DNAs of the isolates were extracted and their 16S rRNA genes were amplified by PCR using bacterial universal primers. The resulting 16S rRNA gene sequences were compared with sequences obtained from public databases to find the most closely related species. Phylogenetic analyses were performed using the software packages MEGA after multiple alignment of sequence data by CLUSTAL X. The evolutional instances (corrected by Kimura's 2-parameter model) were calculated and clustering was performed with the neighbor-joining method. The results showed that the isolates are members of twenty-four genera (Acinetobacter, Agromyces, Arthrobacter, Bacillus, Brevundimonas, Chromohalobacter, Dietzia, Erythrobacter, Exiguobacterium, Halomonas, Idiomarina, Kocuria, Marinobacter, Micrococcus, Paracoccus, Planomicrbium, Porphyrobacter, Pseudomonas, Psychrobacter, Roseivivax, Saccharospirillum, Salegentibactor, Salinicoccus, Streptomyces) of seventeen families (Alteromonadaceae, Bacillaceae, Caulobacteraceae, Flavobacteriaceae, Halomonadaceae, Idiomarinaceae, Microbacteriaceae, Micrococcaceae, Moraxellaceae, Planococcaceae, Pseudomonadaceae, Rhodobacteraceae, Dietziaceae, Saccharospirillaceae, Sphingomonadaceae, Staphylococcaceae, Streptomycetaceae) in four major phylogenetic groups (Actinobacteria, Bacteroidetes, Firmicutes, Proteobacteria). The most abundant and diverse isolates were within the phyla of Proteobacteria (47.3%; Gamma-Proteobacteria, 31.5%; Alpha

  6. Diversity and Distribution of Culturable Microbial Communities of Semiarid Desert Steppe and Cultivated Land in Northwestern China

    Directory of Open Access Journals (Sweden)

    LI Yan-lin CHEN Ji-xiang

    2016-05-01

    Full Text Available The diversity and community distribution of culturable bacteria, actinomycetes, fungi in semiarid desert steppe in northwestern part of China were studied by using dilution plate count, clone isolation and 16S rDNA sequence analysis methods. The results showed that the numbers of culturable bacteria, actinomycetes and fungi of desert steppe were 1.23×106 cfu·g-1, 0.19×106 cfu·g-1 and 0.18×106 cfu·g-1, respectively, compared with those of the cultivated land, whose numbers were 3.03×106 cfu·g-1, 0.53×106 cfu·g-1 and 0.05×106 cfu·g-1 respectively. The numbers of culturable bacteria and actinomycetes in the desert steppe soil were lower than those of the cultivated land, while the fungal number in desert steppe soil was higher than that of the cultivated land. A total of 14 bacterial strains were isolated from the desert steppe soil. The strains belonged to the following three phyla:γ-Proteobacteria(Psychrobacter), Actinobacteria(Kytococcus), and Firmicutes(Bacillus, Lysinibacillus, Solibacillus, Aerococcus). Among which Bacillus and Psychrobacter were the predominant genus. Nineteen bacterial strains were isolated from the cultivated land and were further affiliated to four phyla:ɑ-Proteobacteri(Rhizobium, Sinorhizobium), γ-Proteobacteria(Pseudomonas), Firmicutes(Bacillus) and Actinobacteria(Microbacterium, Arthrobacter, Micrococcus, Kocuria). Actinobacteria was the predominant phylum(occupied 57.9%). A total of 8 actinomycetes strains were isolated from the desert steppe soil and were identified to belong to three phylogenetic groups:Atreptomyces, Micromonspora, Intrasporangium. And Atreptomyces, Micromonspora were the dominant communities in cultivated land. The fungi strains from the desert steppe were identified and designated as Alternaria and Cladosporium. But Penicillium, Alternaria, Aspergillus, Mucor and Coniothecium were isolated from cultivated land. The results indicated that the

  7. Coupling of fog and marine microbial content in the near-shore coastal environment

    Directory of Open Access Journals (Sweden)

    M. E. Dueker

    2012-02-01

    Full Text Available Microbes in the atmosphere (microbial aerosols play an important role in climate and provide an ecological and biogeochemical connection between oceanic, atmospheric, and terrestrial environments. However, the sources and environmental factors controlling the concentration, diversity, transport, and viability of microbial aerosols are poorly understood. This study examined culturable microbial aerosols from a coastal environment in Maine (USA and determined the effect of onshore wind speed and fog presence on deposition rate, source, and community composition. During fog events with low onshore winds (<2 m s−1 the near-shore deposition of microbial aerosols (microbial fallout decreased with increasing wind speeds, whereas microbial fallout rates under clear conditions and comparable low wind speeds showed no wind speed dependence. Mean aerosol particle size also increased with onshore wind speed when fog was present, indicating increased shoreward transport of larger aerosol particles. 16S rRNA sequencing of culturable ocean surface bacteria and microbial aerosols deposited onshore resulted in the detection of 31 bacterial genera, with 5 dominant genera (Vibrio, Bacillus, Pseudoalteromonas, Psychrobacter, Salinibacterium making up 66 % of all sequences. The sequence library from microbial aerosol isolates, as with libraries found in other coastal/marine aerosol studies, was dominated at the phylum level by Proteobacteria, with additional representation from Firmicutes, Actinobacteria and Bacteroidetes. Seventy-five percent of the culturable microbial aerosols falling out under foggy conditions were most similar to GenBank-published sequences detected in marine environments. Using a 97 % similarity cut-off, sequence libraries from ocean surface and fog isolates shared eight operational taxonomic units (OTU's in total, three of which were the most dominant OTU's in the library, representing large fractions of the ocean (28

  8. Why Earth cryopegs are interesting to astrobiologists?

    Science.gov (United States)

    Rivkina, Elizaveta; Spirina, Elena; Demidov, Nikita; Shcherbakova, Viktoria; Yoshikawa, Kenji; Gilichinsky, David

    The lenses of perennially overcooled water brines (cryopegs) derived from ancient marine sedi-ments and sandwiched within permafrost 10 to 120,000 years ago after the placeArctic Ocean regressions. In these lenses freezing is prevented by freezing-point depression due to the dis-solved salt and they remain liquid at the in situ temperatures down to -11oC as a result of their high sodium-chloride concentration (3-5 mol/l). Cryopegs make up the only habitat on Earth that is characterized by permanently subzero temperatures, high salinity, and isolation from the influence of external factors during geological time. During last years the biodiversity of cryopeg's indigenous microbial community along the Arctic coast of placePlaceNamePolar PlaceTypeOcean (Kara and placeEast Siberian Sea, placePla-ceNameJamal PlaceTypePeninsula and placePlaceTypeCape PlaceNameBarrow) were studied and the new species representing the different genera have been isolated and described. There were found both aerobic and anaerobic microorganisms: Psychrobacters, Sulfate-reducers, Clostridia, etc. The isolated bacteria grew at subzero temperatures, and were also tolerant to salt concentra-tions up to metricconverterProductID3 M3 M NaCl. The microorganisms detected in cryopegs are halophilic and psychrophilic organisms at the same time. The microbial activity detected in cryopegs (14C-labeled glucose consumption) at temperatures as low as metricconverterProductID-15?C-15C-15° C documents the fact that subzero temper-atures themselves do not exclude biochemical reactions. In situ microbial activity and survival of microorganisms in a low-temperature high-salt aquatic environment on a geological time scale indicates the special type of microbial adaptation. From the astrobiological perspective, mineral-enriched brines provide the only opportunity for free water within the Martian subsurface permafrost, formed when Mars became dry and cold. These brines, just as terrestrial cryopegs, may contain

  9. Marine bacteria comprise a possible indicator of drowning in seawater.

    Science.gov (United States)

    Kakizaki, Eiji; Takahama, Keiichi; Seo, Yasuhisa; Kozawa, Shuji; Sakai, Masahiro; Yukawa, Nobuhiro

    2008-04-07

    marine bacteria (Photobacterium, Vibrio, Shewanella, Psychrobacter). Thus, proliferating bioluminescent and/or blue colonies detected in the blood of immersed cadavers using 4% NaCl TH agar, could help to establish drowning in seawater.

  10. Role of EPS, Dispersant and Nutrients on the Microbial Response and MOS Formation in the Subarctic Northeast Atlantic

    Directory of Open Access Journals (Sweden)

    Tony Gutierrez

    2017-04-01

    Full Text Available In this study we report the formation of marine oil snow (MOS, its associated microbial community, the factors influencing its formation, and the microbial response to crude oil in surface waters of the Faroe-Shetland Channel (FSC. The FSC is a subarctic region that is hydrodynamically complex located in the northeast Atlantic where oil extraction is currently occurring and where exploration is likely to expand into its deeper waters (>500 m. A major oil spill in this region may mirror the aftermath that ensued following the Deepwater Horizon (DWH blowout in the Gulf of Mexico, where the massive influx of Macondo crude oil triggered the formation of copious quantities of rapidly sinking MOS and successional blooms of opportunistic oil-degrading bacteria. In laboratory experiments, we simulated environmental conditions in sea surface waters of the FSC using water collected from this site during the winter of 2015. We demonstrated that the presence of dispersant triggers the formation of MOS, and that nutrient amendments magnify this. Illumina MiSeq sequencing revealed the enrichment on MOS of associated oil-degrading (Cycloclasticus, Thalassolituus, Marinobacter and EPS-producing (Halomonas, Pseudoalteromonas, Alteromonas bacteria, and included major representation by Psychrobacter and Cobetia with putative oil-degrading/EPS-producing qualities. The formation of marine snow, in the absence of crude oil and dispersant, in seawater amended with nutrients alone indicated that the de novo synthesis of bacterial EPS is a key factor in MOS formation, and the glycoprotein composition of the MOS aggregates confirmed that its amorphous biopolymeric matrix was of microbial (likely bacterial origin. The presence of dispersants and crude oil with/without nutrients resulted in distinct microbial responses marked by intermittent, and in some cases short-lived, blooms of opportunistic heterotrophs, principally obligate hydrocarbonoclastic (Alcanivorax

  11. Fine Flounder (Paralichthys adspersus) Microbiome Showed Important Differences between Wild and Reared Specimens

    Science.gov (United States)

    Ramírez, Carolina; Romero, Jaime

    2017-01-01

    The intestinal microbiota is involved in a wide range of biological processes that benefit the host, including providing nutrition and modulating the immune system. Fine flounder (Paralichthys adspersus) is a flatfish of commercial interest that is native to the Chilean coast. The high value of this flatfish has prompted the development of stock enhancement and aquaculture activities. Knowledge of microbiota may help to improve the cultivation of this species; however, few comparative studies have evaluated the intestinal microbiota composition in farmed versus wild fishes. Intestinal contents from wild and aquaculture fish were collected, and DNA was extracted. Subsequently, the V3-region of 16S rRNA was PCR amplified and sequenced using the Ion Torrent platform. The comparison between wild and aquaculture specimens revealed important differences in the composition of the microbiota. The most abundant phylum in wild flounder was Proteobacteria, with an average relative abundance of 68.1 ± 15.4%; in contrast, in aquaculture flounder, this phylum had an average relative abundance of 30.8 ± 24.1%. Reciprocally, the most abundant phylum in flounder aquaculture was Firmicutes, averaging 61.2 ± 28.4%; in contrast, this phylum showed low abundance in wild flounder, in which it averaged 4.7 ± 4%. The phylum Actinobacteria showed greater abundance in wild flounder, ranging from 21.7 ± 18.8%, whereas, it averaged only 2.7 ± 3.8% in aquaculture fish. Specific taxa that were differentially distributed between wild and aquaculture flounder were identified using a statistical approach. At the genus level, a total of four genera were differentially represented between the two conditions. Bacillus and Pseudomonas were more highly represented in aquaculture flounder, whereas Arthrobacter and Psychrobacter were observed in wild flounder. Furthermore, in both cases, predicted functions (metabolic pathways) indicated that those microbiota might provide beneficial effects for

  12. Coupling of fog and marine microbial content in the near-shore coastal environment

    Directory of Open Access Journals (Sweden)

    M. E. Dueker

    2011-09-01

    Full Text Available Microbes in the atmosphere (microbial aerosols play an important role in climate and provide an ecological and biogeochemical connection between oceanic, atmospheric, and terrestrial environments. However, the sources and environmental factors controlling the concentration, diversity, transport, and viability of microbial aerosols are poorly understood. This study examined culturable microbial aerosols from a coastal environment in Maine (USA and determined the effect of onshore wind speed and fog presence on deposition rate, source, and community composition. During fog events with low onshore winds (< 2 m s−1 the near-shore deposition of microbial aerosols (microbial fallout decreased with increasing wind speeds, whereas microbial fallout rates under clear conditions and comparable low wind speeds showed no wind speed dependence. Mean aerosol particle size also increased with onshore wind speed when fog was present, indicating increased shoreward transport of larger aerosol particles. 16S rRNA sequencing of culturable ocean surface bacteria and microbial aerosols deposited onshore resulted in the detection of 31 bacterial genera, with 5 dominant genera (Vibrio, Bacillus, Pseudoalteromonas, Psychrobacter, Salinibacterium making up 66% of all sequences. The microbial aerosol sequence library, as with libraries found in other coastal/marine aerosol studies, was dominated at the phylum level by Proteobacteria, with additional representation from Firmicutes, Actinobacteria and Bacteroidetes. Seventy-five percent of the viable microbial aerosols falling out under foggy conditions were most similar to GenBank-published sequences detected in marine environments. Using a 97% similarity cut-off, ocean surface and fog sequence libraries shared eight operational taxonomic units (OTU's in total, three of which were the most dominant OTU's in the library, representing large fractions of the ocean (28% and fog (21% libraries. The fog and

  13. 不同时期鲳鱼冷藏期间优势腐败菌的多样性变化%Diversity of Dominant Spoilage Bacteria in Pomfret (Pampus argenteus) from Different Growing Seasons during Chilled Storage

    Institute of Scientific and Technical Information of China (English)

    蓝蔚青; 谢晶; 周会; 张琛杰

    2015-01-01

    目的:比较分析不同时期冷藏鲳鱼(Pampus argenteus)贮藏期间的感官品质、pH值、微生物指标与主要微生物菌群的变化规律.方法:冷藏(4±1)℃条件下,以感官评定、pH值与菌落总数为品质评价指标,采用聚合酶链式反应(polymerase chain reaction,PCR)扩增结合生理生化鉴定法分别对冬、春两个时期的鲳鱼进行优势腐败菌的变化规律研究.将经细菌培养与分离纯化得到单菌落按其形态特征进行分类,再通过生理生化鉴定与革兰氏染色,初步得到菌落种类,对单菌落进行DNA提取与PCR扩增并测序.结果:冬季样品获得12种菌株,春季样品获得9种菌株.贮藏末期时,冬季样品中优势腐败菌的种类与比例分别为嗜冷杆菌(Psychrobacter spp.)21.51%、草莓假单胞菌(Pseudomonas fragi)16.13%、荧光假单胞菌(Pseudomonas fluorescens)52.68%与热杀索丝菌(Brochothrix thermosphacta)9.68%;春季样品为草莓假单胞菌(Pseudomonas fragi)8.62%、荧光假单胞菌(Pseudomonas fluorescens)64.66%与腐败希瓦氏菌(Shewanella putrefaciens)26.72%.结论:冬、春时期中冷藏鲳鱼贮藏期间优势腐败菌的种类基本一致,以革兰氏阴性菌为主,但在细菌种类与比例上存在差异,冬季样品的微生物种类较春季丰富.贮藏期间,随着荧光假单胞菌所占比例的增加,使腐败希瓦氏菌的生长受到明显抑制.

  14. Elongation Factor-Tu (EF-Tu) proteins structural stability and bioinformatics in ancestral gene reconstruction

    Science.gov (United States)

    Dehipawala, Sunil; Nguyen, A.; Tremberger, G.; Cheung, E.; Schneider, P.; Lieberman, D.; Holden, T.; Cheung, T.

    2013-09-01

    A paleo-experimental evolution report on elongation factor EF-Tu structural stability results has provided an opportunity to rewind the tape of life using the ancestral protein sequence reconstruction modeling approach; consistent with the book of life dogma in current biology and being an important component in the astrobiology community. Fractal dimension via the Higuchi fractal method and Shannon entropy of the DNA sequence classification could be used in a diagram that serves as a simple summary. Results from biomedical gene research provide examples on the diagram methodology. Comparisons between biomedical genes such as EEF2 (elongation factor 2 human, mouse, etc), WDR85 in epigenetics, HAR1 in human specificity, DLG1 in cognitive skill, and HLA-C in mosquito bite immunology with EF Tu DNA sequences have accounted for the reported circular dichroism thermo-stability data systematically; the results also infer a relatively less volatility geologic time period from 2 to 3 Gyr from adaptation viewpoint. Comparison to Thermotoga maritima MSB8 and Psychrobacter shows that Thermus thermophilus HB8 EF-Tu calibration sequence could be an outlier, consistent with free energy calculation by NUPACK. Diagram methodology allows computer simulation studies and HAR1 shows about 0.5% probability from chimp to human in terms of diagram location, and SNP simulation results such as amoebic meningoencephalitis NAF1 suggest correlation. Extensions to the studies of the translation and transcription elongation factor sequences in Megavirus Chiliensis, Megavirus Lba and Pandoravirus show that the studied Pandoravirus sequence could be an outlier with the highest fractal dimension and lowest entropy, as compared to chicken as a deviant in the DNMT3A DNA methylation gene sequences from zebrafish to human and to the less than one percent probability in computer simulation using the HAR1 0.5% probability as reference. The diagram methodology would be useful in ancestral gene

  15. Effects of Chitosan on Microbial Diversity of Cutlassfish (Trichiurus haumela) During Chilled Storage%壳聚糖对带鱼冷藏期间微生物多样性的影响研究

    Institute of Scientific and Technical Information of China (English)

    蓝蔚青; 谢晶; 李健; 吴嘉慧

    2014-01-01

    本文研究了壳聚糖对冷藏(4±1℃)带鱼贮藏期间微生物多样性的影响,分别选取0、2、4、6、8、10、12 d,以感官评分、pH值、菌落总数为测定指标,同时进行微生物分离纯化,提取细菌DNA与PCR扩增,将扩增产物测序.结果表明,10.0 g/L的壳聚糖溶液能明显延缓带鱼鲜度下降,抑制细菌增长,冷藏货架期较对照组延长了4~5d.对照组样品在腐败末期(10 d)的菌相组成是:草莓假单胞菌(Pseudomnas fragi) (29.5%),荧光假单胞菌(Pseudomonas fluorescens)(33.4%),腐败希瓦氏菌(Shewanella putrefaciens)(32.0%),松鼠葡萄球菌(Staphylococcus sciuri)(5.1%);处理组(12 d)有:草莓假单胞菌(Pseudomonas fragi) (38.2%),荧光假单胞菌(Pseudomonas fluorescens) (30.1%),腐败希瓦氏菌(Shewanella putrefaciens)(29.0%),热死环丝菌(Brochothrix thermosphacta)(2.7%).经壳聚糖处理后的带鱼样品,在其贮藏期间,使腐生葡萄球菌(Staphylococcus saprophyticus),松鼠葡萄球菌(Staphylococcus sciuri)与嗜冷杆菌(Psychrobacter spp.)的生长受到抑制.草莓假单胞菌(Pseudomonas fragi)、荧光假单胞菌(Pseudomonas fluorescens)与腐败希瓦氏菌(Shewanella putrefaciems)为优势腐败菌.

  16. 冷藏鲳鱼贮藏期间的细菌种群变化%Bacterial Species Changes in Pampus argenteus During Chilled Storage

    Institute of Scientific and Technical Information of China (English)

    蓝蔚青; 谢晶; 施建兵; 周会; 张琛杰

    2013-01-01

    分析了鲳鱼(Pampus argenteus)冷藏期间的感官、pH值、微生物指标及主要细菌种群变化.研究表明,初始样品pH值为7.217±0.015,菌落总数(CFU/g)的对数值为3.967±0.012;初始细菌种类较多,其中45.92%为革兰氏阴性菌,54.08%为革兰氏阳性菌,优势菌为腐生葡萄球菌(Staphylococcus saprophyticus 28.81%)、松鼠葡萄球菌(Staphylococcus sciuri 15.38%)、嗜冷杆菌(Psychrobacter spp.12.09%)、草莓假单胞菌(Pseudomonas fragi 9.02%)、荧光假单胞菌(Pseudomonas fluorescens 8.53%)与腐败希瓦氏菌(Shewanella putrefaciens 6.39%),同时检出一定比例的成团肠杆菌、微杆菌与嗜根库克菌.冷藏过程中,腐生葡萄球菌与松鼠葡萄球菌等生长受到抑制,细菌菌相组成逐渐单一,适应低温环境条件的革兰氏阴性菌比例逐渐增加,在贮藏的第3、5、7天至货架期终点(pH值为8.057±0.005,菌落总数(CFU/g)的对数值为9.137±0.032)时,阴性菌比例分别达到83.82%、95.86%、96.88%与93.57%.其中,假单胞菌与腐败希瓦氏菌增长显著,在贮藏末期比例为45.71%与33.57%,荧光假单胞菌(35.00%)明显多于草莓假单胞菌(10.71%).

  17. Examining the Longitudinal Biliterate Trajectory of Emerging Bilingual Learners in a Paired Literacy Instructional Model

    Science.gov (United States)

    Sparrow, Wendy; Butvilofsky, Sandra; Escamilla, Kathy; Hopewell, Susan; Tolento, Teresa

    2014-01-01

    This longitudinal study examines the biliteracy results of Spanish-English emerging bilingual students who participated in a K-5 paired literacy model in a large school district in Oregon. Spanish and English reading and writing data show longitudinal gains in students' biliterate development, demonstrating the potential of the model in developing…

  18. Cross-Discipline Teaching for English Learners

    Science.gov (United States)

    Upczak-Garcia, Anne

    2012-01-01

    The author works as a biliteracy teacher in a bilingual school that serves students from K-5th grade. She and her coteacher provide instruction in both English and Spanish to 4th and 5th graders. They have two language arts blocks so that students receive literacy instruction in both their native and second languages, and they teach math, social…

  19. AcEST: BP919861 [AcEST

    Lifescience Database Archive (English)

    Full Text Available K5|SYA_MYCMO Alanyl-tRNA synthetase OS=Mycoplasma mobile ... 31 2.5 sp|Q8TEV9|SMCR8_HUMAN Smith-Magenis synd...KLLKNSENKLE 794 >sp|Q8TEV9|SMCR8_HUMAN Smith-Magenis syndrome chromosomal region candidate gene 8 protein OS

  20. On the dynamics of homogeneous turbulence near a surface

    Science.gov (United States)

    Flores, Oscar; Riley, James J.

    2011-11-01

    It is becoming increasing clear that stably-stratified flows can support a stratified turbulence k - 5 / 3 inertial range, different from Kolmogorov's. Stratification inhibits vertical motions, but the large-scale quasi-horizontal motions produce strong vertical shearing and small-scale instabilities. The result is a k - 5 / 3 horizontal spectrum for the horizontal velocities at scales larger than the Ozmidov scale, the largest scale that can overturn. For smaller scales, the classical Kolmogorov k - 5 / 3 applies. Inspired by data taken near the water surface in a tidal river, we here explore to what extent the dynamics of the nonlinear spectral energy transfer of near-surface turbulence with no mean shear (i.e., horizontally isotropic turbulence bounded by free-slip and no-slip surfaces) is analogous to stably stratified turbulence. To that end, we perform DNS of decaying isotropic turbulence with Reλ ~ 100 , but bounded by a non-slip surface and a free slip surface. The behavior of the flow near the free-slip surface is similar to stratified turbulence, with a tentative k - 5 / 3 range, but the same is not true for the no-slip surface at the present Reynolds numbers. This research was supported by ARO and NSF. Chickadel et al. (2011) to appear in IEEE Geosci. Remote Sens. Lett.

  1. Examining Elementary Teachers' Engineering Self-Efficacy and Engineering Teacher Efficacy

    Science.gov (United States)

    Hammack, Rebekah; Ivey, Toni

    2017-01-01

    Research indicates that teacher efficacy influences student achievement and is situation specific. With the Next Generation Science Standards calling for the incorporation of engineering practices into K-12 classrooms, it is important to identify teachers' engineering teaching efficacy. A study of K-5 teachers' engineering self-efficacy and…

  2. A Case Study of a Child with Dyslexia and Spatial-Temporal Gifts

    Science.gov (United States)

    Cooper, Eileen E.; Ness, Maryann; Smith, Mary

    2004-01-01

    This case study details the history and K-5 school experience of a boy with dyslexia and spatial-temporal gifts. It describes assessment, evaluation, and identification procedures; the learning specialist's interventions and program; the critical role of the parent; and the services provided by the gifted program. Specific interventions are…

  3. A Fine Arts Residency.

    Science.gov (United States)

    Riggs, Patricia L.

    1982-01-01

    A four-week writer-in-residence program designed to stimulate the creativity of K-5 students was held in the Briar Glen Library Media Center, Wheaton, Illinois, with poet Joan Colby. This description of the program includes information on planning, funding, and future plans. (CHC)

  4. Examining Elementary Teachers' Engineering Self-Efficacy and Engineering Teacher Efficacy

    Science.gov (United States)

    Hammack, Rebekah; Ivey, Toni

    2017-01-01

    Research indicates that teacher efficacy influences student achievement and is situation specific. With the Next Generation Science Standards calling for the incorporation of engineering practices into K-12 classrooms, it is important to identify teachers' engineering teaching efficacy. A study of K-5 teachers' engineering self-efficacy and…

  5. Fostering Student Sense Making in Elementary Science Learning Environments: Elementary Teachers' Use of Science Curriculum Materials to Promote Explanation Construction

    Science.gov (United States)

    Zangori, Laura; Forbes, Cory T.; Biggers, Mandy

    2013-01-01

    While research has shown that elementary (K-5) students are capable of engaging in the scientific practice of explanation construction, commonly-used elementary science curriculum materials may not always afford them opportunities to do so. As a result, elementary teachers must often adapt their science curriculum materials to better support…

  6. A Case Study of a Child with Dyslexia and Spatial-Temporal Gifts

    Science.gov (United States)

    Cooper, Eileen E.; Ness, Maryann; Smith, Mary

    2004-01-01

    This case study details the history and K-5 school experience of a boy with dyslexia and spatial-temporal gifts. It describes assessment, evaluation, and identification procedures; the learning specialist's interventions and program; the critical role of the parent; and the services provided by the gifted program. Specific interventions are…

  7. Electromagnetic soil properties variability in a minefield trial site in Cambodia and its effect on the detection of mine-like targets with a dual-sensor system

    NARCIS (Netherlands)

    Ranada Shaw, A.; Gorriti, A.; Schoolderman, A.J.; Rhebergen, J.B.

    2006-01-01

    In this paper results are presented of a study on the performance of a dual-sensor landmine detector and its dependency on soil moisture. The detector was used on a trial site in the K5 mine belt in Cambodia. Soil samples were taken from the trial lane, as well as GPR measurements. The data obtained

  8. Characterizing the NP-PSPACE Gap in the Satisfiability Problem for Modal Logic

    Science.gov (United States)

    2007-02-01

    BEZHANISHVILI AND I. M. HODKINSON, All normal extensions of S5-squared are finitely axiomatizable, Studia Logica , 78 (2004), pp. 443–457. [3] P. BLACKBURN, M...complete, Studia Logica , 81 (2005), pp. 153–165. [11] M. C. NAGLE, The decidability of normal K5 logics, Journal of Symbolic Logic, 46 (1981), pp. 319–328

  9. 32 CFR 1701.21 - Exemption of National Counterterrorism Center (NCTC) systems of records.

    Science.gov (United States)

    2010-07-01

    ...)(1) and (k)(5) of the Act: (1) NCTC Human Resources Management System (ODNI/NCTC-001). (2) (b...) (accounting of disclosures) because an accounting of disclosures from records concerning the record subject... for the following reasons: (1) From subsection (c)(3) (accounting of disclosures) because...

  10. 32 CFR 1701.23 - Exemption of Office of Inspector General (OIG) systems of records.

    Science.gov (United States)

    2010-07-01

    ...)(1) and (k)(5) of the Act: (1) OIG Human Resources Records (ODNI/OIG-001). (2) OIG Experts Contact... reasons: (1) From subsection (c)(3) (accounting of disclosures) because an accounting of disclosures from... following reasons: (1) From subsection (c)(3) (accounting of disclosures) because an accounting...

  11. Inclusion bodies as potential vehicles for recombinant protein delivery into epithelial cells

    Directory of Open Access Journals (Sweden)

    Liovic Mirjana

    2012-05-01

    Full Text Available Abstract Background We present the potential of inclusion bodies (IBs as a protein delivery method for polymeric filamentous proteins. We used as cell factory a strain of E. coli, a conventional host organism, and keratin 14 (K14 as an example of a complex protein. Keratins build the intermediate filament cytoskeleton of all epithelial cells. In order to build filaments, monomeric K14 needs first to dimerize with its binding partner (keratin 5, K5, which is then followed by heterodimer assembly into filaments. Results K14 IBs were electroporated into SW13 cells grown in culture together with a “reporter” plasmid containing EYFP labeled keratin 5 (K5 cDNA. As SW13 cells do not normally express keratins, and keratin filaments are built exclusively of keratin heterodimers (i.e. K5/K14, the short filamentous structures we obtained in this study can only be the result of: a if both IBs and plasmid DNA are transfected simultaneously into the cell(s; b once inside the cells, K14 protein is being released from IBs; c released K14 is functional, able to form heterodimers with EYFP-K5. Conclusions Soluble IBs may be also developed for complex cytoskeletal proteins and used as nanoparticles for their delivery into epithelial cells.

  12. Mobilities of Language and Literacy Ideologies: Dual Language Graduates' Bilingualism and Biliteracy

    Science.gov (United States)

    Granados, Nadia R.

    2017-01-01

    Using qualitative methodology, this research examines how graduates of a K-5 dual language immersion program have experienced multiple and competing social, cultural, institutional, and political forces at play in complex processes that ultimately affect one's mobilities of language, literacy, and learning. These students have now grown into…

  13. Presynaptic inhibition by kainate receptors converges mechanistically with presynaptic inhibition by adenosine and GABAB receptors.

    Science.gov (United States)

    Partovi, Dara; Frerking, Matthew

    2006-11-01

    Kainate receptors are widely reported to regulate the release of neurotransmitter in the CNS, but the mechanisms involved remain controversial. Previous studies have found that the kainate receptor agonist ATPA, which selectively activates Glu(K5)-containing kainate receptors, depresses glutamate release at Schaffer-collateral synapses in the hippocampus. In the present study, we provide pharmacological evidence that this depressant effect is mediated by Glu(K5)-containing heteromers, but is distinct from a similar depressant effect engaged by the kainate receptor agonist domoate. The depressant effect of ATPA is insensitive to antagonists for GABA(A), GABA(B), and adenosine receptors, and is also unaffected by lowering the release probability by reducing extracellular calcium. However, the effect of ATPA is partly occluded by prior activation of GABA(B) receptors and completely occluded by prior activation of adenosine receptors, suggesting a mechanistic convergence of heteromeric Glu(K5) kainate receptor signaling with GABA(B) receptors and adenosine receptors. The effects of domoate are partially occluded by both adenosine and GABA(B) receptor agonists, indicating at least a partial convergence of Glu(K5)-lacking kainate receptor signaling with these other pathways. The depressant effect of ATPA is not blocked by inhibition of serine/threonine protein kinases. These results suggest that ATPA and domoate inhibit glutamate release through mechanisms that converge with those of classical metabotropic receptor agonists, although they do so through different receptors.

  14. Ore. Community Schools Show Staying Power

    Science.gov (United States)

    Samuels, Christina A.

    2012-01-01

    For Lynch View Elementary, a K-5 school in suburban Portland, the school day doesn't end when the bell rings at 2:22 p.m. As one of 64 "community schools" in Multnomah County, the school also provides homework assistance, academic enrichment, free breakfast and dinner for students, a weekly food pantry, a host site for local medical…

  15. The Feasibility of Using Pyrolysis-Mass Spectrometry and Pyrolysis-MS/MS with Pattern Recognition for the Identification of Biological Materials.

    Science.gov (United States)

    1987-01-07

    Bacillus subtilis (2) (3) Enterobacter aerogenes (3) (3) Providencia alcalifaciens (3) (3) Streptococcus faecalis (0) (3) Streptococcus salivarius (0) (3...licheniformis i 5 10. Enterobacter aerogenes j 5 S 11. Streptococcus lactis k 5 12. Providencia alcalifaciens 1 5 13. Streptococcus faecalis m 5 14. Streptococcus

  16. A German Language Continuum: Kindergarten through Grade 5.

    Science.gov (United States)

    Meyer, Gertrud E.

    This rationale for the German immersion program of the Milwaukee public schools (grades K-5) sets forth general and specific program goals as well as criteria for evaluating communicative competence. A list of sample exercises for specific communicative acts (e.g., telling, informing, requesting) is included. Topics for oral and written…

  17. Inclusion bodies as potential vehicles for recombinant protein delivery into epithelial cells.

    Science.gov (United States)

    Liovic, Mirjana; Ozir, Mateja; Zavec, Apolonija Bedina; Peternel, Spela; Komel, Radovan; Zupancic, Tina

    2012-05-24

    We present the potential of inclusion bodies (IBs) as a protein delivery method for polymeric filamentous proteins. We used as cell factory a strain of E. coli, a conventional host organism, and keratin 14 (K14) as an example of a complex protein. Keratins build the intermediate filament cytoskeleton of all epithelial cells. In order to build filaments, monomeric K14 needs first to dimerize with its binding partner (keratin 5, K5), which is then followed by heterodimer assembly into filaments. K14 IBs were electroporated into SW13 cells grown in culture together with a "reporter" plasmid containing EYFP labeled keratin 5 (K5) cDNA. As SW13 cells do not normally express keratins, and keratin filaments are built exclusively of keratin heterodimers (i.e. K5/K14), the short filamentous structures we obtained in this study can only be the result of: a) if both IBs and plasmid DNA are transfected simultaneously into the cell(s); b) once inside the cells, K14 protein is being released from IBs; c) released K14 is functional, able to form heterodimers with EYFP-K5. Soluble IBs may be also developed for complex cytoskeletal proteins and used as nanoparticles for their delivery into epithelial cells.

  18. A Developmental Program to Non-Grade Mathematics K-12.

    Science.gov (United States)

    Ferrell, Phyllis C.

    This report summarizes the first two years of study at the Elk Grove Training and Development Center. The initial program was designed to improve mathematics instruction through the use of a non-graded multi-media approach utilizing laboratory team teaching. Achievement test summaries indicate that K-5 students instructed in mathematics through…

  19. 40 CFR 63.453 - Monitoring requirements.

    Science.gov (United States)

    2010-07-01

    .... (b) A CMS shall be operated to measure the temperature in the firebox or in the ductwork immediately... times as requested by the Administrator. The visual inspection shall include inspection of ductwork...) through (k)(5) of this section identifies visible defects in ductwork, piping, enclosures or...

  20. Inclusion bodies as potential vehicles for recombinant protein delivery into epithelial cells

    Science.gov (United States)

    2012-01-01

    Background We present the potential of inclusion bodies (IBs) as a protein delivery method for polymeric filamentous proteins. We used as cell factory a strain of E. coli, a conventional host organism, and keratin 14 (K14) as an example of a complex protein. Keratins build the intermediate filament cytoskeleton of all epithelial cells. In order to build filaments, monomeric K14 needs first to dimerize with its binding partner (keratin 5, K5), which is then followed by heterodimer assembly into filaments. Results K14 IBs were electroporated into SW13 cells grown in culture together with a “reporter” plasmid containing EYFP labeled keratin 5 (K5) cDNA. As SW13 cells do not normally express keratins, and keratin filaments are built exclusively of keratin heterodimers (i.e. K5/K14), the short filamentous structures we obtained in this study can only be the result of: a) if both IBs and plasmid DNA are transfected simultaneously into the cell(s); b) once inside the cells, K14 protein is being released from IBs; c) released K14 is functional, able to form heterodimers with EYFP-K5. Conclusions Soluble IBs may be also developed for complex cytoskeletal proteins and used as nanoparticles for their delivery into epithelial cells. PMID:22624805

  1. Social Aggression on Television and Its Relationship to Children's Aggression in the Classroom

    Science.gov (United States)

    Martins, Nicole; Wilson, Barbara J.

    2012-01-01

    A survey was conducted with over 500 children in grades K-5 to examine whether exposure to socially aggressive content was related to children's use of social aggression. The results of the survey revealed a significant relationship between exposure to televised social aggression and increased social aggression at school, but only for girls and…

  2. Anti-inflammatory properties of the medicinal mushroom Cordyceps militaris might be related to its linear (1¿3)-ß-D-glucan.

    NARCIS (Netherlands)

    Smiderle, F.R.; Baggio, C.H.; Borato, D.G.; Santana-Filho, A.P.; Sassaki, G.L.; Iacomini, M.; Griensven, van L.J.L.D.

    2014-01-01

    The Ascomycete Cordyceps militaris, an entomopathogenic fungus, is one of the most important traditional Chinese medicines. Studies related to its pharmacological properties suggest that this mushroom can exert interesting biological activities. Aqueous (CW and HW) and alkaline (K5) extracts contain

  3. Building Interactional Space in an ESL Classroom to Foster Bilingual Identity and Linguistic Repertoires

    Science.gov (United States)

    Welch, Irene

    2015-01-01

    This article draws on data from a yearlong case study of a Mexican American ESL teacher's practice in a K-5 school in the southeastern United States. The study examines how the teacher established bilingual interactional space in her ESL pullout class consisting of six 9- to 11-year old students of Mexican descent. The analysis shows the ways in…

  4. Dream Box Learning. What Works Clearinghouse Intervention Report

    Science.gov (United States)

    What Works Clearinghouse, 2013

    2013-01-01

    "DreamBox Learning" is a supplemental online mathematics program that provides adaptive instruction for students in grades K-5 and focuses on number and operations, place value, and number sense. The What Works Clearinghouse (WWC) identified one study of "DreamBox Learning" that both falls within the scope of the Elementary…

  5. Happy and Sad Thoughts: An Exploration of Children's Integer Reasoning

    Science.gov (United States)

    Whitacre, Ian; Bishop, Jessica Pierson; Lamb, Lisa L. C.; Philipp, Randolph A.; Schappelle, Bonnie P.; Lewis, Melinda L.

    2012-01-01

    The purpose of this study was to investigate elementary children's conceptions that might serve as foundations for integer reasoning. Working from an abstract algebraic perspective and using an opposite-magnitudes context that is relevant to children, we analyzed the reasoning of 33 children in grades K-5. We focus our report on three prominent…

  6. Established Independent School Collaborates with Social Service Agency to Launch New School: Community Partnership School, Pennsylvania

    Science.gov (United States)

    Stewart, Sarah

    2016-01-01

    Community Partnership School (CPS) serves 90 to 95 students annually in preK-5th grade. Of these, 100 percent are African American or multiracial, and all qualify for free or reduced-price lunch. Community Partnership School began as a collaboration between Germantown Academy, which had trouble recruiting low-income students to its suburban…

  7. 78 FR 14158 - Airworthiness Directives; Bombardier, Inc. Airplanes

    Science.gov (United States)

    2013-03-05

    ... government and the States, or on the distribution of power and responsibilities among the various levels of.... List of Subjects in 14 CFR Part 39 Air transportation, Aircraft, Aviation safety, Incorporation by... incorporating Task 2420/13, Operational Check of Relays K4, K5, K6, and K7 (Post Modsum 8Q101917), in...

  8. Preventing and Responding to Bullying: An Elementary School's 4-Year Journey

    Science.gov (United States)

    McCormac, Mary E.

    2015-01-01

    Bullying continues to be a pervasive problem in schools and requires a schoolwide approach. This article describes the action research process used to examine the impact of a 4-year, K-5 school bullying prevention and intervention. The school counselors collaborated with students, staff, and parents to implement the program, and collected and…

  9. Large-Scale Spectral Structure with a Gap in the Stably Stratified Atmosphere

    DEFF Research Database (Denmark)

    Chen, T M; Larsen, Søren Ejling; Pécseli, Hans

    1985-01-01

    . On this basis, we obtain the spectral laws k-5/3, k-1, k-3 for the subranges of inertia, shear, and buoyancy, respectively. A gap connects the last two subranges by the variable anisotropy, as a result of the fall of the spectrum of the vertical velocity fluctuations. The variable anisotropy causes...

  10. Happy and Sad Thoughts: An Exploration of Children's Integer Reasoning

    Science.gov (United States)

    Whitacre, Ian; Bishop, Jessica Pierson; Lamb, Lisa L. C.; Philipp, Randolph A.; Schappelle, Bonnie P.; Lewis, Melinda L.

    2012-01-01

    The purpose of this study was to investigate elementary children's conceptions that might serve as foundations for integer reasoning. Working from an abstract algebraic perspective and using an opposite-magnitudes context that is relevant to children, we analyzed the reasoning of 33 children in grades K-5. We focus our report on three prominent…

  11. Exploring Categorical Body Mass Index Trajectories in Elementary School Children

    Science.gov (United States)

    Moreno-Black, Geraldine; Boles, Shawn; Johnson-Shelton, Deb; Evers, Cody

    2016-01-01

    Background: Studies of body mass index (BMI) change have focused on understanding growth trajectories from childhood to adolescence and adolescence to adulthood, but few have explored BMI trajectories solely in elementary (grades K-5) school children. This report complements these studies by exploring changes in obesity status using analytic…

  12. A Study of a Collaborative Instructional Project Informed by Systemic Functional Linguistic Theory: Report Writing in Elementary Grades

    Science.gov (United States)

    Brisk, Maria Estela; Hodgson-Drysdale, Tracy; O'Connor, Cheryl

    2011-01-01

    This study examined the teaching of report writing in PreK-5 through the lens of systemic functional linguistics theory. Teachers were part of a university-public school collaboration that included professional development on teaching genres, text organization, and language features. Grounded in this knowledge, teachers explicitly taught report…

  13. Stimulation of the N-methyl-D-aspartate receptor has a trophic effect on differentiating cerebellar granule cells

    DEFF Research Database (Denmark)

    Balázs, R; Hack, N; Jørgensen, Ole Steen

    1988-01-01

    N-methyl-D-aspartate (NMDA) supplementation of cerebellar cultures enriched in granule neurones (about 90%) prevented the extensive cell loss which occurs when cultivation takes place, in serum containing media, in the presence of 'low' K+ (5-15 mM). Estimation of tetanus toxin receptors and N-CA...

  14. 75 FR 77697 - Action To Ensure Authority To Issue Permits Under the Prevention of Significant Deterioration...

    Science.gov (United States)

    2010-12-13

    ... for the correction of SIPs with certain types of inadequacies, under CAA section 110(k)(5), which... treatment and livestock management facilities, and fermentation processes for ethanol production.] EPA plans... certain types of biomass and other biogenic sources (e.g., biogas from landfills) for energy...

  15. 32 CFR Appendix D to Part 310 - Provisions of the Privacy Act From Which a General or Specific Exemption May Be Claimed

    Science.gov (United States)

    2010-07-01

    ... orders. No No (12) Disclosure to consumer reporting agencies. No No (c)(1) Making disclosure accountings... other failure to comply. Yes No (g)(5) Jurisdiction and time limits. Yes No (h) Rights of legal... to Presidential protection. Yes N/A (k)(4) Exemption for statistical records. Yes N/A (k)(5...

  16. The Language Learning Motivation of Early Adolescent French Immersion Graduates

    Science.gov (United States)

    Wesely, Pamela M.

    2009-01-01

    This interpretive multiple case study examines the motivation to learn a second language among sixth grade students who attended a French immersion school for grades K-5. Parent surveys, student surveys based on Gardner's Attitude/Motivation Test Battery, and individual and group interviews with students were the data sources used to identify…

  17. "Arabian Tales": Standards of Learning.

    Science.gov (United States)

    Brookshire, Cathy A.

    Virginia Standards of Learning for K-5 are listed in this paper with student activities related to observation of live theatre performances of "Arabian Tales" written and performed by the high school theater touring company, Organized Chaos. This play toured in Virginia in the academic year of 2000-2001. The play runs about 45 minutes.…

  18. Ethnic and Gender Differences in Identifying Gifted Students: A Multi-Cultural Analysis

    Science.gov (United States)

    Sarouphim, Ketty M.; Maker, C. June

    2010-01-01

    The purpose of this study was to examine ethnic and gender differences in using DISCOVER, a performance-based assessment, for identifying gifted students. The sample consisted of 941 students from grades K-5 belonging to six ethnicities: White Americans, African-Americans, Hispanics, Native-Americans, South Pacific/Pacific Islanders, and Arabs.…

  19. 8-Methoxypsoralen Plus Ultraviolet A Therapy Acts via Inhibition of the IL-23/Th17 Axis and Induction of Foxp3(+) Regulatory T Cells Involving CTLA4 Signaling in a Psoriasis-Like Skin Disorder

    NARCIS (Netherlands)

    Singh, Tej Pratap; Schoen, Michael P.; Wallbrecht, Katrin; Michaelis, Kai; Rinner, Beate; Mayer, Gerlinde; Schmidbauer, Ulrike; Strohmaier, Heimo; Wang, Xiao-Jing; Wolf, Peter

    2010-01-01

    To elucidate the molecular action of 8-methoxypsoralen plus UVA (PUVA), a standard dermatological therapy, we used K5. hTGF-beta 1 transgenic mice exhibiting a skin phenotype and cytokine abnormalities with strong similarities to human psoriasis. We observed that impaired function of CD4(+)CD25(+) r

  20. Evaluation of the MIND Research Institute's Spatial-Temporal Math (ST Math) Program in California

    Science.gov (United States)

    Wendt, Staci; Rice, John; Nakamoto, Jonathan

    2014-01-01

    The MIND Research Institute contracted with the Evaluation Research Program at WestEd to conduct an independent assessment of mathematics outcomes in elementary school grades across California that were provided with the ST Math program. Spatial-Temporal (ST) Math is a game-based instructional software designed to boost K-5 and secondary-level…

  1. Direct measurement of recombination frequency in interspecific hybrids between Hordeum vulgare and H. bulbosum using genomic in situ hybridization.

    Science.gov (United States)

    Zhang, L; Pickering, R; Murray, B

    1999-09-01

    Two different genotypes of diploid Hordeum vulgare x H. bulbosum hybrids, which differ in their pattern of meiotic metaphase pairing behaviour, were investigated at MI and AI by genomic in situ hybridization (GISH). One hybrid, 102C2, showed a high frequency of bivalents at metaphase I whereas the other, 103K5, showed a high frequency of univalents. The GISH analysis of both hybrids established that pairing occurred only between chromosomes of different parental genomes and revealed that pairing frequency greatly exceeded recombination. Hybrid 102C2 had a significantly higher recombination frequency than 103K5, but in both hybrids recombination involved only distal chromosome regions. However, an interesting finding is that the ratio of recombination to pairing frequency in 103K5 (1:8.9) is twice as high compared with 102C2 (1:17). The hybrids also differed in chromosome stability; little chromosome elimination occurred in 102C2 but 103K5 showed extensive chromosome loss. It appears that the high frequency of bound arms at MI favours retention of H. bulbosum chromosomes and maintains stability of chromosome numbers in PMCs. Various ideas are put forward to explain the discrepancy between meiotic pairing frequency and recombination in these hybrids.

  2. Fairview German Bilingual School: A Successful Model for Elementary-School, Second-Language Learning, Part II. Laying the Foundation: German in the First Grade.

    Science.gov (United States)

    Ryan, Marianne

    The first grade program of the Fairview German Bilingual School, the elementary (K-5) segment of the Cincinnati public school system's German bilingual alternative program, is described. The school provides intensive second-language instruction in German for monolingual English-speaking children with bilingualism as the objective. The school is…

  3. Voyager Reading Programs. What Works Clearinghouse Intervention Report

    Science.gov (United States)

    What Works Clearinghouse, 2010

    2010-01-01

    "Voyager Passport"[TM] is a supplemental reading intervention system for students in grades K-5. "Voyager Passport Reading Journeys"[TM] is a reading intervention program designed for adolescents who struggle with reading. The "Voyager Universal Literacy System"[R] is a K-3 reading program that includes a core reading…

  4. Electromagnetic soil properties variability in a minefield trial site in Cambodia and its effect on the detection of mine-like targets with a dual-sensor system

    NARCIS (Netherlands)

    Ranada Shaw, A.; Gorriti, A.; Schoolderman, A.J.; Rhebergen, J.B.

    2006-01-01

    In this paper results are presented of a study on the performance of a dual-sensor landmine detector and its dependency on soil moisture. The detector was used on a trial site in the K5 mine belt in Cambodia. Soil samples were taken from the trial lane, as well as GPR measurements. The data obtained

  5. New Clues on the Nature of Extremely Red Galaxies

    CERN Document Server

    Cimatti, A; Alighieri, S S; Pozzetti, L; Mannucci, F; Renzini, A; Oliva, E; Zamorani, G; Andreani, P; Röttgering, H J A

    1999-01-01

    We present near-infrared VLT-UT1+ISAAC spectroscopy of a sample of 9 extremely red galaxies (ERGs) with R-K>5 and K0.8. We discuss the general implications of our findings in relation with the problem of the formation of early type galaxies.

  6. Mutations in KRT5 and KRT14 cause epidermolysis bullosa simplex in 75% of the patients

    NARCIS (Netherlands)

    Bolling, M. C.; Lemmink, H. H.; Jansen, G. H. L.; Jonkman, M. F.

    2011-01-01

    P>Background Epidermolysis bullosa simplex (EBS) is a mechanobullous genodermatosis that may be caused by mutations in the genes KRT5 and KRT14 encoding the basal epidermal keratins 5 (K5) and 14 (K14). Three main clinical subtypes of EBS exist, differing in onset, distribution and severity of skin

  7. Preventing and Responding to Bullying: An Elementary School's 4-Year Journey

    Science.gov (United States)

    McCormac, Mary E.

    2015-01-01

    Bullying continues to be a pervasive problem in schools and requires a schoolwide approach. This article describes the action research process used to examine the impact of a 4-year, K-5 school bullying prevention and intervention. The school counselors collaborated with students, staff, and parents to implement the program, and collected and…

  8. Investigations in Number, Data, and Space[R]. What Works Clearinghouse Intervention Report

    Science.gov (United States)

    What Works Clearinghouse, 2013

    2013-01-01

    "Investigations in Number, Data, and Space"[R], published by Pearson Scott Foresman, is an activity-based K-5 mathematics curriculum designed to help students understand number and operations, geometry, data, measurement, and early algebra. Each instructional unit focuses on a particular content area and lasts from two to five-and-a-half…

  9. Investigations in Number, Data, and Space[R]. WWC Intervention Report

    Science.gov (United States)

    What Works Clearinghouse, 2009

    2009-01-01

    Investigations in Number, Data, and Space[R], published by Pearson Scott Foresman, is an activity-based K-5 mathematics curriculum designed to help students understand the fundamental ideas of number and operations, geometry, data, measurement, and early algebra. The curriculum encourages students to use prior knowledge to develop an understanding…

  10. Unpacking the Evaluation Process: A Study of Transitional Bilingual Education

    Science.gov (United States)

    Hofstetter, C.H.

    2004-01-01

    This article examines the process of an ongoing, independent evaluation of atransitional Spanish/English bilingual program housed at a large, urban school district in Northern California. The program is designed to enhance Kindergarten through Grade 5 (K-5) students' English language proficiency, as well as their English performance in academic…

  11. Effects of a Transitional Bilingual Education Program: Findings, Issues, and Next Steps

    Science.gov (United States)

    Hofstetter, Carolyn Huie

    2004-01-01

    This study examined the effectiveness of a transitional Spanish-English bilingual program, Academic Language Acquisition (ALA), in enhancing K-5 students' English-language proficiency, as well as their English performance in academic subject areas, in comparison with the Structured English Immersion (SEI) process. An existing reading program,…

  12. EARLY STAGES IN THE EVOLUTION OF PROTOPLANETARY DISKS

    Directory of Open Access Journals (Sweden)

    J. Hernández

    2009-01-01

    around low mass stars (spectral types K5 or later is 5-7 Myr, showing an overall decrease in disk emission between 1 to 10 Myr. This contribution shows the main results from studies in the Orion OB1 stellar association combining SPITZER and 2MASS catalog data with optical data obtained in the CIDA Variability Survey.

  13. Experiment list: SRX150674 [Chip-atlas[Archive

    Lifescience Database Archive (English)

    Full Text Available s=Leukemia Chronic Myelogenous 18469470,89.4,7.1,725 GSM935595: Harvard ChipSeq K562 BRF1 std source_name=K5...62 || biomaterial_provider=ATCC || lab=Harvard || lab description=Struhl - Harvard University || datatype=Ch

  14. Experiment list: SRX150569 [Chip-atlas[Archive

    Lifescience Database Archive (English)

    Full Text Available s=Leukemia Chronic Myelogenous 51487836,63.2,7.7,861 GSM935490: Harvard ChipSeq K562 BRF2 std source_name=K5...62 || biomaterial_provider=ATCC || lab=Harvard || lab description=Struhl - Harvard University || datatype=Ch

  15. A preliminary investigation of the water use efficiency of sweet ...

    African Journals Online (AJOL)

    2016-01-01

    Jan 1, 2016 ... K5/1874) entitled: 'Water use of cropping systems adapted to bio-climatic regions in .... Mengistu and Savage, 2010) methods as the residual of the shortened ..... has also made a decision not to support the production of bio-.

  16. KSHV MicroRNAs Repress Tropomyosin 1 and Increase Anchorage-Independent Growth and Endothelial Tube Formation.

    Directory of Open Access Journals (Sweden)

    Philippe Kieffer-Kwon

    Full Text Available Kaposi's sarcoma (KS is characterized by highly vascularized spindle-cell tumors induced after infection of endothelial cells by Kaposi's sarcoma-associated herpesvirus (KSHV. In KS tumors, KSHV expresses only a few latent proteins together with 12 pre-microRNAs. Previous microarray and proteomic studies predicted that multiple splice variants of the tumor suppressor protein tropomyosin 1 (TPM1 were targets of KSHV microRNAs. Here we show that at least two microRNAs of KSHV, miR-K2 and miR-K5, repress protein levels of specific isoforms of TPM1. We identified a functional miR-K5 binding site in the 3' untranslated region (UTR of one TPM1 isoform. Furthermore, the inhibition or loss of miR-K2 or miR-K5 restores expression of TPM1 in KSHV-infected cells. TPM1 protein levels were also repressed in KSHV-infected clinical samples compared to uninfected samples. Functionally, miR-K2 increases viability of unanchored human umbilical vein endothelial cells (HUVEC by inhibiting anoikis (apoptosis after cell detachment, enhances tube formation of HUVECs, and enhances VEGFA expression. Taken together, KSHV miR-K2 and miR-K5 may facilitate KSHV pathogenesis.

  17. Preventing and Responding to Bullying: An Elementary School's 4-Year Journey

    Science.gov (United States)

    McCormac, Mary E.

    2015-01-01

    Bullying continues to be a pervasive problem in schools and requires a schoolwide approach. This article describes the action research process used to examine the impact of a 4-year, K-5 school bullying prevention and intervention. The school counselors collaborated with students, staff, and parents to implement the program, and collected and…

  18. Excess NF-κB induces ectopic odontogenesis in embryonic incisor epithelium.

    Science.gov (United States)

    Blackburn, J; Kawasaki, K; Porntaveetus, T; Kawasaki, M; Otsuka-Tanaka, Y; Miake, Y; Ota, M S; Watanabe, M; Hishinuma, M; Nomoto, T; Oommen, S; Ghafoor, S; Harada, F; Nozawa-Inoue, K; Maeda, T; Peterková, R; Lesot, H; Inoue, J; Akiyama, T; Schmidt-Ullrich, R; Liu, B; Hu, Y; Page, A; Ramírez, Á; Sharpe, P T; Ohazama, A

    2015-01-01

    Nuclear factor kappa B (NF-κB) signaling plays critical roles in many physiological and pathological processes, including regulating organogenesis. Down-regulation of NF-κB signaling during development results in hypohidrotic ectodermal dysplasia. The roles of NF-κB signaling in tooth development, however, are not fully understood. We examined mice overexpressing IKKβ, an essential component of the NF-κB pathway, under keratin 5 promoter (K5-Ikkβ). K5-Ikkβ mice showed supernumerary incisors whose formation was accompanied by up-regulation of canonical Wnt signaling. Apoptosis that is normally observed in wild-type incisor epithelium was reduced in K5-Ikkβ mice. The supernumerary incisors in K5-Ikkβ mice were found to phenocopy extra incisors in mice with mutations of Wnt inhibitor, Wise. Excess NF-κB activity thus induces an ectopic odontogenesis program that is usually suppressed under physiological conditions. © International & American Associations for Dental Research 2014.

  19. 32 CFR 311.8 - Procedures for exemptions.

    Science.gov (United States)

    2010-07-01

    ... materials, and to safeguard evaluation materials used for military promotions when furnished by a.... 552a(k)(5). (iii) Reasons. It is imperative that the confidential nature of evaluation and investigatory material on teacher application files furnished the Department of Defense Dependent Schools...

  20. Keratinocyte-targeted overexpression of the glucocorticoid receptor delays cutaneous wound healing.

    Directory of Open Access Journals (Sweden)

    Ana Sanchis

    Full Text Available Delayed wound healing is one of the most common secondary adverse effects associated to the therapeutic use of glucocorticoid (GC analogs, which act through the ligand-dependent transcription factor GC-receptor (GR. GR function is exerted through DNA-binding-dependent and -independent mechanisms, classically referred to as transactivation (TA and transrepression (TR. Currently both TA and TR are thought to contribute to the therapeutical effects mediated by GR; however their relative contribution to unwanted side effects such as delayed wound healing is unknown. We evaluated skin wound healing in transgenic mice with keratinocyte-restricted expression of either wild type GR or a mutant GR that is TA-defective but efficient in TR (K5-GR and K5-GR-TR mice, respectively. Our data show that at days (d 4 and 8 following wounding, healing in K5-GR mice was delayed relative to WT, with reduced recruitment of granulocytes and macrophages and diminished TNF-α and IL-1β expression. TGF-β1 and Kgf expression was repressed in K5-GR skin whereas TGF-β3 was up-regulated. The re-epithelialization rate was reduced in K5-GR relative to WT, as was formation of granulation tissue. In contrast, K5-GR-TR mice showed delays in healing at d4 but re-established the skin breach at d8 concomitant with decreased repression of pro-inflammatory cytokines and growth factors relative to K5-GR mice. Keratinocytes from both transgenic mice closed in vitro wounds slower relative to WT, consistent with the in vivo defects in cell migration. Overall, the delay in the early stages of wound healing in both transgenic models is similar to that elicited by systemic treatment with dexamethasone. Wound responses in the transgenic keratinocytes correlated with reduced ERK activity both in vivo and in vitro. We conclude that the TR function of GR is sufficient for negatively regulating early stages of wound closure, while TA by GR is required for delaying later stages of healing.

  1. Epidermal hyperplasia induced by Raf-MAPK signaling requires Stat3 activation.

    Science.gov (United States)

    Tarutani, Masahito; Nakajima, Kimiko; Takaishi, Mikiro; Ohko, Kentaro; Sano, Shigetoshi

    2013-11-01

    Raf is one of the downstream effectors of Ras GTPases, and plays a key role in regulating cell proliferation and differentiation through the activation of MAPK. We have previously demonstrated that temporal induction of Raf in the epidermis of K14-Raf:ER transgenic mice results in epidermal hyperplasia resembling squamous cell carcinoma and psoriasis. It has been demonstrated that epidermal Stat3 activation is required for psoriasis development, since keratinocyte-specific Stat3 activation in a mouse model elicits a psoriasis-like phenotype, which is reversed by inhibition of Stat3 signaling. The aim of this study was whether Stat3 signaling is involved in Raf-MAPK-dependent epidermal hyperplasia. K14-Raf:ER transgenic mice, in which the 4-hydroxytamoxifen (4OHT)-responsive mutant estrogen receptor ligand binding domain-Raf fusion gene is expressed under control of the keratin 14 promoter, were mated with epidermis-specific Stat3 null mice (K5-Cre.Stat3(flox/flox)). K5-Cre.Stat3(flox/flox) mice were used to define the impact of Stat3 deficiency on Raf-induced epidermal hyperplasia. Over-expression of Raf by 4OHT treatment in K14-Raf:ER;K5-Cre.Stat3(flox/flox) mice greatly attenuated the epidermal hyperplasia and dermal cell infiltrates compared with K14-Raf:ER;K5-Cre.Stat3(flox/WT) mice. Also, up-regulation of psoriasis-associated cytokine profiles, including VEGF, was inhibited in the skin from K14-Raf:ER;K5-Cre.Stat3(flox/flox) mice following 4OHT treatment. These results clearly indicate that Raf-MAPK-dependent psoriatic-like epidermal hyperplasia requires Stat3 signaling in keratinocytes. Copyright © 2013 Japanese Society for Investigative Dermatology. Published by Elsevier Ireland Ltd. All rights reserved.

  2. Composition and distribution of TCBS bacteria groups from sediments of Jiulong River estuary%九龙江口沉积物TCBS(Thiosulfate Citrate Bile Salts Sucrose)菌群的分布

    Institute of Scientific and Technical Information of China (English)

    陈明霞; 李和阳; 马云飞; 史莹鑫; 傅毅凌; 郑天凌; 郑森林; 陈彬

    2012-01-01

    [Objective]To investigate potential pathogens in waters of Xiamen from Jiulong River, and to provide useful information for the prevention and control of potential pathogen infections. [Methods] All samples were spread on Thiosulfate Citrate Bile Salts Sucrose (TCBS) agar plates, and then incubated at 26 ± 1℃ for 24 ±2 h. In total 158 TCBS strains were isolated from TCBS agar plates and pure-cultivated on 2216E agar plates. All strains were identified using the 16S rRNA gene- Restriction fragment length polymorphism (RFLP) , 16S rRNA sequence analysis, GenBank database Basic Local Alignment Search Tool (BLAST) and phylogenetic analysis. [Results] The results show that 158 TCBS strains from the sediments of Jiulong River estuary were classfied as 7 genus, which were Pseudomonas (28%), Aeromonas (24%) , Pseudoalteromonas (19%) , Shewanella (13%) , Bacillus (11%) , Vibrio (4%) and Psychrobacter (1%). The composition and distribution of TCBS bacteria groups varied with stations. Non-halophilic or haloduric bacteria groups were dominant in the upper area of Jiulong River estuary, and halophilic and haloduric bacteria were dominant in the lower area, which characterized a typical estuary feature. The salinity played a key role in the distribution of TCBS groups. Vibrios did not constitute a significant proportion (6% - 19%) of the total TCBS strains at different stations, and most of the them distributed at the lower region. [Conclusion] There were a lot of potential pathogens in Jiulong River estuary. Aeromonas, a typical genus of halotolerant bacteria, was the potentially terrigenous bacteria contamination to the waters of Xiamen. Most Vibrio specieses were marine aborigines, which was not directly contaminated from the runoff of Jiulong River.%[目的]调查九龙江流域对厦门海域潜在的病原菌“污染”,为相关侵染性病害的预防和控制提供有价值的资料.[方法]通过TCBS(Thiosulfate Citrate Bile Salts Sucrose)培养基从九龙

  3. PCR结合表型鉴定对超高压处理后的冷藏带鱼细菌菌相分析%Microbial ecology ofTrichiurus lepturus of haitail pretreated by high hydrostatic pressure during cold storage based on phenotypic and 16S rRNA gene analysis

    Institute of Scientific and Technical Information of China (English)

    谢晶; 刘骁; 杨茜; 钱韵芳; 张新林

    2016-01-01

    The effect of high hydrostatic pressure (290 MPa, 6 min) on microbial ecology changes ofTrichiurus lepturus during vacuum-packaged storage (12 d) was studied via 16S rRNA gene sequencing analysis and phenotypic methods. The microbial colonies of aerobic culture and anaerobic culture, which were obtained from 5 microflora’s growth stages (including freshTrichiurus lepturus, freshTrichiurus lepturus which were stored under 4℃ for 4, 8 and 12 d after high hydrostatic pressure treatment), were isolated and purified by the tryptic soy agar medium and tryptic soy broth medium, repeatedly classified by the traditional phenotypic methods (morphological, physiological and biochemical characteristics of bacteria strains), and then the bacteria DNA of pure culture was extracted and amplified by the polymerase chain reaction (PCR). Finally, 24 bacteria strains of aerobic culture and anaerobic culture in the vacuum-packaged Trichiurus lepturus under the 4℃cold storage were obtained. The result showed thatPseudomonas brenneri,Pseudomonas fulva andPsychrobacter faecalis which appeared in the initial microflora of freshTrichiurus lepturus were inactivated and non-existent after the high hydrostatic pressure treatment; 5 bacteria strains (includingShewanella baltica,Pseudomonas lundensis,Stenotrophomonas rhizophila,Staphylococcus epidermidis andMicrobacterium oxydans) gradually reduced and disappeared after the high hydrostatic pressure treatment. Three bacteria strains gradually grew with the extension of storage time, which were Microbacterium halimionae,Macrococcus caseolyticus andRhizobium larrymoorei. In the whole process of storage after the high hydrostatic pressure treatment, 4 bacteria strains (Moraxella osloensis,Kocuria rhizophila,Carnobacterium maltaromaticum andDermacoccus nishinomiyaensis) always existed, and they were not sensitive to the high hydrostatic pressure treatment. EspeciallyCarnobacterium maltaromaticum, which had a high proportion of total bacteria

  4. Leveraging Current Initiatives to Bring Earth and Space Science into Elementary and Early Childhood Classrooms: NGSS in the Context of the Classroom Technology Push

    Science.gov (United States)

    Pacheco-Guffrey, H. A.

    2016-12-01

    Classroom teachers face many challenges today such as new standards, the moving targets of high stakes tests and teacher evaluations, inconsistent/insufficient access to resources and evolving education policies. Science education in the K-5 context is even more complex. NGSS can be intimidating, especially to K-5 educators with little science background. High stakes science tests are slow to catch up with newly drafted state level science standards, leaving teachers unsure about what to change and when to implement updated standards. Amid all this change, many schools are also piloting new technology programs. Though exciting, tech initiatives can also be overwhelming to teachers who are already overburdened. A practical way to support teachers in science while remaining mindful of these stressors is to design and share resources that leverage other K-5 school initiatives. This is often done by integrating writing or math into science learning to meet Common Core requirements. This presentation will suggest a method for bringing Earth and space science learning into elementary / early childhood classrooms by utilizing the current push for tablet technology. The goal is to make science integration reasonable by linking it to technology programs that are in their early stages. The roles and uses of K-5 Earth and space science apps will be examined in this presentation. These apps will be linked to NGSS standards as well as to the science and engineering practices. To complement the app resources, two support frameworks will also be shared. They are designed to help educators consider new technologies in the context of their own classrooms and lessons. The SAMR Model (Puentadura, 2012) is a conceptual framework that helps teachers think critically about the means and purposes of integrating technology into existing lessons. A practical framework created by the author will also be shared. It is designed to help teachers identify and address the important logistical

  5. A Planarity Criterion for Graphs

    CERN Document Server

    Dosen, Kosta

    2012-01-01

    It is proven that a connected graph is planar if and only if all its cocycles with at least four edges are "grounded" in the graph. The notion of grounding of this planarity criterion, which is purely combinatorial, stems from the intuitive idea that with planarity there should be a linear ordering of the edges of a cocycle such that in the two subgraphs remaining after the removal of these edges there can be no crossing of disjoint paths that join the vertices of these edges. The proof given in the paper of the right-to-left direction of the equivalence is based on Kuratowski's Theorem for planarity involving $K_{3,3}$ and $K_5$, but the criterion itself does not mention $K_{3,3}$ and $K_5$. Some other variants of the criterion are also shown necessary and sufficient for planarity.

  6. An initial meta-analysis of Acceptance and Commitment Therapy for treating substance use disorders.

    Science.gov (United States)

    Lee, Eric B; An, Woolee; Levin, Michael E; Twohig, Michael P

    2015-10-01

    In the past decade, multiple studies have examined the effectiveness of Acceptance and Commitment Therapy (ACT) for substance use disorders relative to other active treatments. The current meta-analysis examined the aggregate effect size when comparing ACT to other treatments (e.g., CBT, pharmacotherapy, 12-step, treatment as usual) specifically on substance use outcomes. A total of 10 randomized controlled trials were identified through systematic searches. A significant small to medium effect size was found favoring ACT relative to active treatment comparisons following treatment. Effect sizes were comparable across studies for smoking cessation (k=5) and for other drug use disorders (k=5). Based on these findings, ACT appears to be a promising intervention for substance use disorders. Limitations and future directions are discussed. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  7. 环Fp+uFp+vFp+uvFp上的线性码%Linear Codes Over Fp+uFp+vFp+uvFp

    Institute of Scientific and Technical Information of China (English)

    许小芳

    2013-01-01

    The linear codes over the ring R=Fp+uFp+vFp+uυFp are discussed,where the ring R is not a finite chain ring.The structure of the ring R is analyzed and linear codes over this ring are defined,and the linear code of type (p4)k1 (p3)k2 (u)k3 (v)k4 (u+υ)k5 (p)k6 is characterized.%讨论了有限非链环R=Fp+uFp+υFp+uυFp上的线性码,分析了环R的结构,给出了此环上线性码的定义,并讨论了环R上(p4)k1 (p3)k2 (u)b(u)k4(u+υ)k5(p)k6型的线性码.

  8. On the Integer Solution of the Indeterminate Equation x3+8=py2%关于不定方程x3+8=py2的整数解的研究

    Institute of Scientific and Technical Information of China (English)

    普粉丽

    2014-01-01

    Let p=3(8k+5)(8k+6)+1 )(k∈N be an odd prime. By using the elementary method, the sufficient condition of positive integer solution is proved on the condition that the indeterminate equation 2x 3+8= py )( x, y∈N has no integer solutions with gcd(x, y)=1.%设 p=3(8k+5)(8k+6)+1)(k∈N 为奇素数,利用初等方法证明了不定方程x3+82= py 无gcd(x, y)=1的正整数解的一个充分条件。

  9. Mirror symmetry for Calabi-Yau hypersurfaces in weighted P$_{4}$ and extensions of Landau Ginzburg theory

    CERN Document Server

    Candelas, Philip; Katz, Sheldon H.; Candelas, Philip; de la Ossa, Xenia; Katz, Sheldon

    1995-01-01

    Recently two groups have listed all sets of weights (k_1,...,k_5) such that the weighted projective space P_4^{(k_1,...,k_5)} admits a transverse Calabi-Yau hypersurface. It was noticed that the corresponding Calabi-Yau manifolds do not form a mirror symmetric set since some 850 of the 7555 manifolds have Hodge numbers (b_{11},b_{21}) whose mirrors do not occur in the list. By means of Batyrev's construction we have checked that each of the 7555 manifolds does indeed have a mirror. The `missing mirrors' are constructed as hypersurfaces in toric varieties. We show that many of these manifolds may be interpreted as non-transverse hypersurfaces in weighted P_4's, ie, hypersurfaces for which dp vanishes at a point other than the origin. This falls outside the usual range of Landau--Ginzburg theory. Nevertheless Batyrev's procedure provides a way of making sense of these theories.

  10. Thermo-Physical Properties of Kenaf-Filled Acrylonitrile Butadiene Styrene Composites

    Directory of Open Access Journals (Sweden)

    Nikmatin Siti

    2017-01-01

    Full Text Available Studies on advantageous of natural fillers incorporated into polymer composites on thermo-physical and mechanical properties are still intensively investigated. Several evidences suggest that the natural fillers with small contents combined with polymer increase their composite properties. We thus investigate thermo-physical properties of kenaf-filled acrylonitrile butadiene styrene (ABS composites. ABS with 5% kenaf microparticle size (ABS/K5, ABS with 5% kenaf short fiber (ABS/KSF5, and recycled ABS with 5% kenaf microparticle size (RABS/K5 were manufactured. Granular composites were manufactured by the twin screw extruder. Composite properties in terms of X-ray diffractions, surface morphologies, and thermal behaviors were investigated. The present work found that ABS/KSF5 has the highest degree of crystallinity compared to others. No significant difference was found in terms of thermal properties of the composites.

  11. Towards a holographic marginal Fermi liquid

    CERN Document Server

    Jensen, Kristan; Karch, Andreas; Polchinski, Joseph; Silverstein, Eva

    2011-01-01

    We present an infinite class of 2+1 dimensional field theories which, after coupling to semi-holographic fermions, exhibit strange metallic behavior in a suitable large $N$ limit. These theories describe lattices of hypermultiplet defects interacting with parity-preserving supersymmetric Chern-Simons theories with $U(N) \\times U(N)$ gauge groups at levels $\\pm k$. They have dual gravitational descriptions in terms of lattices of probe M2 branes in $AdS_4 \\times S^7/Z_k$ (for $N \\gg 1, N \\gg k^5$) or probe D2 branes in $AdS_4 \\times CP^3$ (for $N \\gg k \\gg 1, N \\ll k^5$). We discuss several challenges one faces in maintaining the success of these models at finite $N$, including backreaction of the probes in the gravity solutions and radiative corrections in the weakly coupled field theory limit.

  12. Three distinct subsets of thymic epithelial cells in rats and mice defined by novel antibodies.

    Directory of Open Access Journals (Sweden)

    Yasushi Sawanobori

    Full Text Available AIM: Thymic epithelial cells (TECs are thought to play an essential role in T cell development and have been detected mainly in mice using lectin binding and antibodies to keratins. Our aim in the present study was to create a precise map of rat TECs using antibodies to putative markers and novel monoclonal antibodies (i.e., ED 18/19/21 and anti-CD205 antibodies and compare it with a map from mouse counterparts and that of rat thymic dendritic cells. RESULTS: Rat TECs were subdivided on the basis of phenotype into three subsets; ED18+ED19+/-keratin 5 (K5+K8+CD205+ class II MHC (MHCII+ cortical TECs (cTECs, ED18+ED21-K5-K8+Ulex europaeus lectin 1 (UEA-1+CD205- medullary TECs (mTEC1s, and ED18+ED21+K5+K8dullUEA-1-CD205- medullary TECs (mTEC2s. Thymic nurse cells were defined in cytosmears as an ED18+ED19+/-K5+K8+ subset of cTECs. mTEC1s preferentially expressed MHCII, claudin-3, claudin-4, and autoimmune regulator (AIRE. Use of ED18 and ED21 antibodies revealed three subsets of TECs in mice as well. We also detected two distinct TEC-free areas in the subcapsular cortex and in the medulla. Rat dendritic cells in the cortex were MHCII+CD103+ but negative for TEC markers, including CD205. Those in the medulla were MHCII+CD103+ and CD205+ cells were found only in the TEC-free area. CONCLUSION: Both rats and mice have three TEC subsets with similar phenotypes that can be identified using known markers and new monoclonal antibodies. These findings will facilitate further analysis of TEC subsets and DCs and help to define their roles in thymic selection and in pathological states such as autoimmune disorders.

  13. An important role for the activation peptide domain in controlling factor IX levels in the blood of haemophilia B mice.

    Science.gov (United States)

    Begbie, Megan E; Mamdani, Asif; Gataiance, Sharon; Eltringham-Smith, Louise J; Bhakta, Varsha; Hortelano, Gonzalo; Sheffield, William P

    2005-12-01

    The factors responsible for the removal of injected factor IX (fIX) from the blood of individuals with haemophilia B are only partly understood, and may include binding to endothelial or subendothelial sites, passive extravasation related to size or charge, or interactions requiring fIX activation. To investigate these issues, we have produced and characterised recombinant fIX proteins with amino acid changes: delta155-177, an internal deletion which removes most of the activation peptide while retaining the activation cleavage sites; S365A, which inactivates the serine protease activity of fIXa; and K5A, previously shown to eliminate fIX binding of endothelial/subendothelial collagen IV. All proteins were expressed in stably transfected HEK 293 cells, purified by immunoaffinity chromatography, and compared to the wild type HEK 293-derived protein (fIX (WT)). Mutant fIX proteins K5A and delta155-177 exhibited 72 and 202% of the specific activity of fIX (WT), respectively; S365A was without activity. Following intravenous injection in haemophilia B (fIX knockout) mice, recoveries did not differ for fIX (WT) and delta155-177, but were higher for K5A and S365A. The terminal catabolic half-life of delta155-177, alone among the mutants, was increased, by 45% versus fIX (WT). Nine hours post-injection, the observed areas under the clearance curve (AUCs) of delta155-177 and K5, but not S365A, were elevated 2-fold. delta155-177 was equally effective as fIX (WT) in reducing blood loss following tail vein transection in haemophilia B mice. Our results suggest that deletion of the multiple sites of fIX post-translational modification found within the activation peptide eliminated important fIX clearance motifs.

  14. Installation Restoration Program. Phase 1. Records Search, Duluth IAP, Minnesota

    Science.gov (United States)

    1982-03-01

    immobilize, contain, treat, destroy or detoxify the wastee 4. Potential pathways of waste migration)- ? k 5. Potential effects of discharge or...of per year, not including aerosol cans. From 50 to 60 aerosol cans are also disposed of as general refuse. 4-8 / I Table 4.2JCURRENT PESTICIDE...under a unit hydraulic gradient 12:7 m TREATMEN OF HAZARDOUS WASTEs Any method, technique, or process including neutralization designed to change the

  15. Embryonic hair follicle fate change by augmented beta-catenin through Shh and Bmp signaling.

    Science.gov (United States)

    Suzuki, Kentaro; Yamaguchi, Yuji; Villacorte, Mylah; Mihara, Kenichiro; Akiyama, Masashi; Shimizu, Hiroshi; Taketo, Makoto M; Nakagata, Naomi; Tsukiyama, Tadasuke; Yamaguchi, Terry P; Birchmeier, Walter; Kato, Shigeaki; Yamada, Gen

    2009-02-01

    beta-catenin signaling is one of the key factors regulating the fate of hair follicles (HFs). To elucidate the regulatory mechanism of embryonic HF fate determination during epidermal development/differentiation, we analyzed conditional mutant mice with keratinocytes expressing constitutively active beta-catenin (K5-Cre Catnb(ex3)fl/+). The mutant mice developed scaly skin with a thickened epidermis and showed impaired epidermal stratification. The hair shaft keratins were broadly expressed in the epidermis but there was no expression of the terminal differentiation markers K1 and loricrin. Hair placode markers (Bmp2 and Shh) and follicular dermal condensate markers (noggin, patched 1 and Pdgfra) were expressed throughout the epidermis and the upper dermis, respectively. These results indicate that the embryonic epidermal keratinocytes have switched extensively to the HF fate. A series of genetic studies demonstrated that the epidermal switching to HF fate was suppressed by introducing the conditional mutation K5-Cre Catnb(ex3)fl/+Shhfl/- (with additional mutation of Shh signaling) or K5-Cre Catnb(ex3)fl/+BmprIAfl/fl (with additional mutation of Bmp signaling). These results demonstrate that Wnt/beta-catenin signaling relayed through Shh and Bmp signals is the principal regulatory mechanism underlying the HF cell fate change. Assessment of Bmp2 promoter activities suggested a putative regulation by beta-catenin signaling relayed by Shh signaling towards Bmp2. We also found that Shh protein expression was increased and expanded in the epidermis of K5-Cre Catnb(ex3)fl/+BmprIAfl/fl mice. These results indicate the presence of growth factor signal cross-talk involving beta-catenin signaling, which regulates the HF fate.

  16. Ten new withanolides from Physalis peruviana.

    Science.gov (United States)

    Fang, Sheng-Tao; Liu, Ji-Kai; Li, Bo

    2012-01-01

    Ten new withanolides, including four perulactone-type withanolides, perulactones E-H (1-4), three 28-hydroxy-withanolides, withaperuvins I-K (5-7), and three other withanolides, withaperuvins L-N (8-10), together with six known compounds (11-16) were isolated from the aerial parts of Physalis peruviana. The structures of these compounds were elucidated on the basis of extensive spectroscopic analyses (1D and 2D NMR, IR, HR-MS) and chemical methods.

  17. 滑盖扬声 三星YP-S5

    Institute of Scientific and Technical Information of China (English)

    LL2037; 岑均权

    2008-01-01

    三星YP-S5作为YP-K5的升级版本,最大特点在于滑盖式音箱的设计。S5的外观独特,更拥有灵敏的触摸式按键、白色LED灯、蓝牙功能以及良好的音质和视频播放表现。

  18. Neutralization of Bacterial Aerosols by Aerodynamic Shocks in a Novel Impactor System: An Integrated Computational and Experimental Study

    Science.gov (United States)

    2010-10-15

    the upstream impactor pressure at 1 atm. Nebulization The phosphate buffered saline (PBS) (BP2438-4, Fisher Scientific) suspension con- taining the...shocks on spores which are more relevant as bioterrorism threats. In laboratory settings, Bacillus subtilis var niger , reclassified as Bacillus...deceleration tube (see Fig. 5.1; parts 4 k. 5) is filled with 600 fiL of phosphate buffer saline (PBS) solution (BP2438-4, Fisher Scientific), which keeps

  19. Thermal Process Development

    Science.gov (United States)

    1983-04-08

    is Subj ect to r estr it itons st at ed in contr act No . OAAK11- 82.-C -055 with ARRA DCO M. E-46 % ,to handle all bulk items. The size of the kiln...e Is subJ ect to r estr ict io nsl st at ed In Co ntr act No. OAAK11-82-C- 0055 w ith AR Rg DOt . K-5 ti• B. System Feed Requirements The concept is

  20. Kinetics and mechanism of the gas-phase reaction of Cl atoms and OH radicals with fluorobenzene at 296 K

    DEFF Research Database (Denmark)

    Andersen, Mads Peter Sulbæk; Nielsen, Ole John; Hurley, MD;

    2002-01-01

    constant for the reaction of C6H5F with Cl atoms. The equilibrium between Cl atoms, C6H5F, and the C6H5F-Cl adduct is established rapidly and has an equilibrium constant estimated to be K-5b=[C6H5F]/[Cl]/[C6H5F][Cl] = (3.2 +/- 2.4) x 10(-1)8 cm(3) molecule(-1). An upper limit of k(9)

  1. Distinct effects of EGFR ligands on human mammary epithelial cell differentiation.

    Directory of Open Access Journals (Sweden)

    Chandrani Mukhopadhyay

    Full Text Available Based on gene expression patterns, breast cancers can be divided into subtypes that closely resemble various developmental stages of normal mammary epithelial cells (MECs. Thus, understanding molecular mechanisms of MEC development is expected to provide critical insights into initiation and progression of breast cancer. Epidermal growth factor receptor (EGFR and its ligands play essential roles in normal and pathological mammary gland. Signals through EGFR is required for normal mammary gland development. Ligands for EGFR are over-expressed in a significant proportion of breast cancers, and elevated expression of EGFR is associated with poorer clinical outcome. In the present study, we examined the effect of signals through EGFR on MEC differentiation using the human telomerase reverse transcriptase (hTERT-immortalized human stem/progenitor MECs which express cytokeratin 5 but lack cytokeratin 19 (K5(+K19(- hMECs. As reported previously, these cells can be induced to differentiate into luminal and myoepithelial cells under appropriate culture conditions. K5(+K19(- hMECs acquired distinct cell fates in response to EGFR ligands epidermal growth factor (EGF, amphiregulin (AREG and transforming growth factor alpha (TGFα in differentiation-promoting MEGM medium. Specifically, presence of EGF during in vitro differentiation supported development into both luminal and myoepithelial lineages, whereas cells differentiated only towards luminal lineage when EGF was replaced with AREG. In contrast, substitution with TGFα led to differentiation only into myoepithelial lineage. Chemical inhibition of the MEK-Erk pathway, but not the phosphatidylinositol 3-kinase (PI3K-AKT pathway, interfered with K5(+K19(- hMEC differentiation. The present data validate the utility of the K5(+K19(- hMEC cells for modeling key features of human MEC differentiation. This system should be useful in studying molecular/biochemical mechanisms of human MEC differentiation.

  2. Tracheal dysplasia precedes bronchial dysplasia in mouse model of N-nitroso trischloroethylurea induced squamous cell lung cancer.

    Directory of Open Access Journals (Sweden)

    Moumita Ghosh

    Full Text Available Squamous cell lung cancer (SCC is the second leading cause of lung cancer death in the US and has a 5-year survival rate of only 16%. Histological changes in the bronchial epithelium termed dysplasia are precursors to invasive SCC. However, the cellular mechanisms that cause dysplasia are unknown. To fill this knowledge gap, we used topical application of N-nitroso-tris chloroethylurea (NTCU for 32 weeks to induce squamous dysplasia and SCC in mice. At 32 weeks the predominant cell type in the dysplastic airways was Keratin (K 5 and K14 expressing basal cells. Notably, basal cells are extremely rare in the normal mouse bronchial epithelium but are abundant in the trachea. We therefore evaluated time-dependent changes in tracheal and bronchial histopathology after NTCU exposure (4, 8, 12, 16, 25 and 32 weeks. We show that tracheal dysplasia occurs significantly earlier than that of the bronchial epithelium (12 weeks vs. 25 weeks. This was associated with increased numbers of K5+/K14+ tracheal basal cells and a complete loss of secretory (Club cell secretory protein expressing CCSP+ and ciliated cells. TUNEL staining of NTCU treated tissues confirmed that the loss of CCSP+ and ciliated cells was not due to apoptosis. However, mitotic index (measured by bromodeoxyuridine incorporation showed that NTCU treatment increased proliferation of K5+ basal cells in the trachea, and altered bronchial mitotic population from CCSP+ to K5+ basal cells. Thus, we demonstrate that NTCU-induced lung epithelial dysplasia starts in the tracheal epithelium, and is followed by basal cell metaplasia of the bronchial epithelium. This analysis extends our knowledge of the NTCU-SCC model by defining the early changes in epithelial cell phenotypes in distinct airway locations, and this may assist in identifying new targets for future chemoprevention studies.

  3. The Pro-inflammatory Role of TGFβ1: A Paradox?

    Directory of Open Access Journals (Sweden)

    Gangwen Han, Fulun Li, Tej Pratap Singh, Peter Wolf, Xiao-Jing Wang

    2012-01-01

    Full Text Available TGFβ1 was initially identified as a potent chemotactic cytokine to initiate inflammation, but the autoimmune phenotype seen in TGFβ1 knockout mice reversed the dogma of TGFβ1 being a pro-inflammatory cytokine to predominantly an immune suppressor. The discovery of the role of TGFβ1 in Th17 cell activation once again revealed the pro-inflammatory effect of TGFβ1. We developed K5.TGFβ1 mice with latent human TGFβ1 overexpression targeted to epidermal keratinocytes by keratin 5. These transgenic mice developed significant skin inflammation. Further studies revealed that inflammation severity correlated with switching TGFβ1 transgene expression on and off, and genome wide expression profiling revealed striking similarities between K5.TGFβ1 skin and human psoriasis, a Th1/Th17-associated inflammatory skin disease. Our recent study reveals that treatments alleviating inflammatory skin phenotypes in this mouse model reduced Th17 cells, and antibodies against IL-17 also lessen the inflammatory phenotype. Examination of inflammatory cytokines/chemokines affected by TGFβ1 revealed predominantly Th1-, Th17-related cytokines in K5.TGFβ1 skin. However, the finding that K5.TGFβ1 mice also express Th2-associated inflammatory cytokines under certain pathological conditions raises the possibility that deregulated TGFβ signaling is involved in more than one inflammatory disease. Furthermore, activation of both Th1/Th17 cells and regulatory T cells (Tregs by TGFβ1 reversely regulated by IL-6 highlights the dual role of TGFβ1 in regulating inflammation, a dynamic, context and organ specific process. This review focuses on the role of TGFβ1 in inflammatory skin diseases.

  4. The Pro-inflammatory Role of TGFβ1: A Paradox?

    Science.gov (United States)

    Han, Gangwen; Li, Fulun; Singh, Tej Pratap; Wolf, Peter; Wang, Xiao-Jing

    2012-01-01

    TGFβ1 was initially identified as a potent chemotactic cytokine to initiate inflammation, but the autoimmune phenotype seen in TGFβ1 knockout mice reversed the dogma of TGFβ1 being a pro-inflammatory cytokine to predominantly an immune suppressor. The discovery of the role of TGFβ1 in Th17 cell activation once again revealed the pro-inflammatory effect of TGFβ1. We developed K5.TGFβ1 mice with latent human TGFβ1 overexpression targeted to epidermal keratinocytes by keratin 5. These transgenic mice developed significant skin inflammation. Further studies revealed that inflammation severity correlated with switching TGFβ1 transgene expression on and off, and genome wide expression profiling revealed striking similarities between K5.TGFβ1 skin and human psoriasis, a Th1/Th17-associated inflammatory skin disease. Our recent study reveals that treatments alleviating inflammatory skin phenotypes in this mouse model reduced Th17 cells, and antibodies against IL-17 also lessen the inflammatory phenotype. Examination of inflammatory cytokines/chemokines affected by TGFβ1 revealed predominantly Th1-, Th17-related cytokines in K5.TGFβ1 skin. However, the finding that K5.TGFβ1 mice also express Th2-associated inflammatory cytokines under certain pathological conditions raises the possibility that deregulated TGFβ signaling is involved in more than one inflammatory disease. Furthermore, activation of both Th1/Th17 cells and regulatory T cells (Tregs) by TGFβ1 reversely regulated by IL-6 highlights the dual role of TGFβ1 in regulating inflammation, a dynamic, context and organ specific process. This review focuses on the role of TGFβ1 in inflammatory skin diseases. PMID:22253566

  5. Lattice Dynamics of Potassium-Doped Single-Walled Carbon Nanotubes

    Institute of Scientific and Technical Information of China (English)

    XIAO Yang; YAN Xiao-Hong; CAO Jue-Xian; MAO Yu-Liang; DENG Yu-Xiang; DING Jian-Wen

    2004-01-01

    @@ We calculate the vibrational properties of potassium-doped single-walled carbon nanotubes within lattice dynamical theory. The results show that the frequency of high-frequency Raman mode E2g for K5C40 downshifts to 1553cm-1, which is in agreement with the value for highly doped samples with effective composition KCs.Moreover, the specific heat curves have a turnover at 22 K, originating from the saturation of K atoms vibrational modes at low energy.

  6. Interview with Susan Morrisey Livingstone, Assistant Secretary of the Army for Installations, Logistics and Environment

    Science.gov (United States)

    2007-03-01

    US Army Corps of Engineers, Engineer Research and Development Center - The Army Environmental History Project Interview with Susan Morrisey...The Army Environmental History Project ERDC/CERL M-07-1 March 2007 Interview with Susan Morrisey Livingstone, Assistant Secretary of the Army for...Environmental Quality," Work Item 6HF9K5, "The Army Environmental History Project." The technical monitor was John J. Fittipaldi, Army Environmental

  7. Targeted expression of ornithine decarboxylase antizyme prevents upper aerodigestive tract carcinogenesis in p53-deficient mice

    OpenAIRE

    Feith, David J.; Pegg, Anthony E.; Fong, Louise Y. Y.

    2012-01-01

    Upper aerodigestive tract (UADT) cancers of the oral cavity and esophagus are a significant global health burden, and there is an urgent need to develop relevant animal models to identify chemopreventive and therapeutic strategies to combat these diseases. Antizyme (AZ) is a multifunctional negative regulator of cellular polyamine levels, and here, we evaluate the susceptibility of keratin 5 (K5)-AZ transgenic mice to tumor models that combine chemical carcinogenesis with dietary and genetic ...

  8. Quantitative Literacy and the Common Core State Standards in Mathematics

    OpenAIRE

    Bernard L. Madison

    2015-01-01

    How supportive of quantitative literacy (QL) are the Common Core State Standards in Mathematics (CCSSM)? The answer is tentative and conditional. There are some QL-supportive features including a strong probability and statistics strand in grade 6 through high school; a measurements and data strand in K-5; ratio and proportional reasoning standards in grades 6 and 7; and a comprehensive and coherent approach to algebraic reasoning and logical argument. However, the standards are weak in suppo...

  9. Identifying, Preparing and Evaluating Army Instructors

    Science.gov (United States)

    2016-04-01

    virtual reality surgical simulator. IEEE Transactions on Information Technology in Biomedicine, 10(1), 51-58. Haney, A. (1997). The role of... teaching , training and instructing as opposed to methods and principles of learning. Methods of learning include reading, observing and other forms of...specific course content (K1), general teaching and evaluation strategies and methods (K4, K5, K6, K8), learner characteristics (K2, K3), and

  10. The Navy Supply Corps Newsletter. Contracting Innovations: Navy Electronic Commerce Online Navy Afloat Purchase Card Program. Volume 62, No. 3.

    Science.gov (United States)

    1998-06-01

    tf • lovy Electronic Commerce Online m Afloat Purchase Card Program4 % y5.ll ’ ’"’#K5&. ifekj 1IÜN AB iräri.1 . ■■-■ 11...Contracting Innovations NAVSUP Electronic Commerce in Contracting for Beginners 8 The Afloat Purchase Card Program: Decentralizing Purchasing for...there. J- May/June NAVSUP Electronic Commerce in Contracting for Beginners By Matt Nielsen, NECO Project Manager, Naval Supply Systems Command M he

  11. Lack of Cyclin-Dependent Kinase 4 Inhibits c-myc Tumorigenic Activities in Epithelial Tissues

    OpenAIRE

    Miliani de Marval, Paula L; Macias, Everardo; Rounbehler, Robert; Sicinski, Piotr; Kiyokawa, Hiroaki; Johnson, David G.; Conti, Claudio J; Rodriguez-Puebla, Marcelo L.

    2004-01-01

    The proto-oncogene c-myc encodes a transcription factor that is implicated in the regulation of cellular proliferation, differentiation, and apoptosis and that has also been found to be deregulated in several forms of human and experimental tumors. We have shown that forced expression of c-myc in epithelial tissues of transgenic mice (K5-Myc) resulted in keratinocyte hyperproliferation and the development of spontaneous tumors in the skin and oral cavity. Although a number of genes involved i...

  12. Lack of cyclin-dependent kinase 4 inhibits c-myc tumorigenic activities in epithelial tissues.

    Science.gov (United States)

    Miliani de Marval, Paula L; Macias, Everardo; Rounbehler, Robert; Sicinski, Piotr; Kiyokawa, Hiroaki; Johnson, David G; Conti, Claudio J; Rodriguez-Puebla, Marcelo L

    2004-09-01

    The proto-oncogene c-myc encodes a transcription factor that is implicated in the regulation of cellular proliferation, differentiation, and apoptosis and that has also been found to be deregulated in several forms of human and experimental tumors. We have shown that forced expression of c-myc in epithelial tissues of transgenic mice (K5-Myc) resulted in keratinocyte hyperproliferation and the development of spontaneous tumors in the skin and oral cavity. Although a number of genes involved in cancer development are regulated by c-myc, the actual mechanisms leading to Myc-induced neoplasia are not known. Among the genes regulated by Myc is the cyclin-dependent kinase 4 (CDK4) gene. Interestingly, previous studies from our laboratory showed that the overexpression of CDK4 led to keratinocyte hyperproliferation, although no spontaneous tumor development was observed. Thus, we tested the hypothesis that CDK4 may be one of the critical downstream genes involved in Myc carcinogenesis. Our results showed that CDK4 inhibition in K5-Myc transgenic mice resulted in the complete inhibition of tumor development, suggesting that CDK4 is a critical mediator of tumor formation induced by deregulated Myc. Furthermore, a lack of CDK4 expression resulted in marked decreases in epidermal thickness and keratinocyte proliferation compared to the results obtained for K5-Myc littermates. Biochemical analysis of the K5-Myc epidermis showed that CDK4 mediates the proliferative activities of Myc by sequestering p21Cip1 and p27Kip1 and thereby indirectly activating CDK2 kinase activity. These results show that CDK4 mediates the proliferative and oncogenic activities of Myc in vivo through a mechanism that involves the sequestration of specific CDK inhibitors.

  13. Genome-wide expression profiling of five mouse models identifies similarities and differences with human psoriasis.

    Directory of Open Access Journals (Sweden)

    William R Swindell

    Full Text Available Development of a suitable mouse model would facilitate the investigation of pathomechanisms underlying human psoriasis and would also assist in development of therapeutic treatments. However, while many psoriasis mouse models have been proposed, no single model recapitulates all features of the human disease, and standardized validation criteria for psoriasis mouse models have not been widely applied. In this study, whole-genome transcriptional profiling is used to compare gene expression patterns manifested by human psoriatic skin lesions with those that occur in five psoriasis mouse models (K5-Tie2, imiquimod, K14-AREG, K5-Stat3C and K5-TGFbeta1. While the cutaneous gene expression profiles associated with each mouse phenotype exhibited statistically significant similarity to the expression profile of psoriasis in humans, each model displayed distinctive sets of similarities and differences in comparison to human psoriasis. For all five models, correspondence to the human disease was strong with respect to genes involved in epidermal development and keratinization. Immune and inflammation-associated gene expression, in contrast, was more variable between models as compared to the human disease. These findings support the value of all five models as research tools, each with identifiable areas of convergence to and divergence from the human disease. Additionally, the approach used in this paper provides an objective and quantitative method for evaluation of proposed mouse models of psoriasis, which can be strategically applied in future studies to score strengths of mouse phenotypes relative to specific aspects of human psoriasis.

  14. Characterization of urinary Escherichia coli O75 strains.

    Science.gov (United States)

    Nimmich, W; Voigt, W; Seltmann, G

    1997-01-01

    Forty-four Escherichia coli O75 strains from patients with urinary tract infections were characterized by a variety of methods to obtain evidence of their clonal distribution and uropathogenic properties. By K and H antigen typing, the strains were divided into the following serotypes: O75:K5:H- (18 strains), O75:K95:H- (10 strains), O75:K95:H5 (7 strains), O75:K100:H5 (4 strains), and O75:K-:H55 (5 strains). Generally, biotyping proved to be of no discriminative value. With two exceptions the strains were found to be sensitive to the bactericidal effect of normal human serum. As shown by multilocus enzyme electrophoresis, the whole-cell protein profile (WCPP), and the patterns of the outer membrane proteins and lipopolysaccharides, all but the five O75:H55 strains were genetically closely related to each other and could be classified into one clonal group. The O75:K-:H55 strains proved to be quite different and lacked type 1 fimbriae. All 17 K95 (H-, H5) strains produced hemolysin and P fimbriae. Five of the O75:K5:H- strains were different from the other K5 strains by showing hemagglutinating properties, on the basis of the presence of the OX adhesin. The last two groups are suggested to be uropathogenic and are proposed to represent separate clonal groups or subgroups. PMID:9114391

  15. Anti-inflammatory properties of the medicinal mushroom Cordyceps militaris might be related to its linear (1→3-β-D-glucan.

    Directory of Open Access Journals (Sweden)

    Fhernanda R Smiderle

    Full Text Available The Ascomycete Cordyceps militaris, an entomopathogenic fungus, is one of the most important traditional Chinese medicines. Studies related to its pharmacological properties suggest that this mushroom can exert interesting biological activities. Aqueous (CW and HW and alkaline (K5 extracts containing polysaccharides were prepared from this mushroom, and a β-D-glucan was purified. This polymer was analysed by GC-MS and NMR spectrometry, showing a linear chain composed of β-D-Glcp (1→3-linked. The six main signals in the 13C-NMR spectrum were assigned by comparison to reported data. The aqueous (CW, HW extracts stimulated the expression of IL-1β, TNF-α, and COX-2 by THP-1 macrophages, while the alkaline (K5 extract did not show any effect. However, when the extracts were added to the cells in the presence of LPS, K5 showed the highest inhibition of the pro-inflammatory genes expression. This inhibitory effect was also observed for the purified β-(1→3-D-glucan, that seems to be the most potent anti-inflammatory compound present in the polysaccharide extracts of C. militaris. In vivo, β-(1→3-D-glucan also inhibited significantly the inflammatory phase of formalin-induced nociceptive response, and, in addition, it reduced the migration of total leukocytes but not the neutrophils induced by LPS. In conclusion, this study clearly demonstrates the anti-inflammatory effect of β-(1→3-D-glucan.

  16. Anti-Inflammatory Properties of the Medicinal Mushroom Cordyceps militaris Might Be Related to Its Linear (1→3)-β-D-Glucan

    Science.gov (United States)

    Smiderle, Fhernanda R.; Baggio, Cristiane H.; Borato, Débora G.; Santana-Filho, Arquimedes P.; Sassaki, Guilherme L.; Iacomini, Marcello; Van Griensven, Leo J. L. D.

    2014-01-01

    The Ascomycete Cordyceps militaris, an entomopathogenic fungus, is one of the most important traditional Chinese medicines. Studies related to its pharmacological properties suggest that this mushroom can exert interesting biological activities. Aqueous (CW and HW) and alkaline (K5) extracts containing polysaccharides were prepared from this mushroom, and a β-D-glucan was purified. This polymer was analysed by GC-MS and NMR spectrometry, showing a linear chain composed of β-D-Glcp (1→3)-linked. The six main signals in the 13C-NMR spectrum were assigned by comparison to reported data. The aqueous (CW, HW) extracts stimulated the expression of IL-1β, TNF-α, and COX-2 by THP-1 macrophages, while the alkaline (K5) extract did not show any effect. However, when the extracts were added to the cells in the presence of LPS, K5 showed the highest inhibition of the pro-inflammatory genes expression. This inhibitory effect was also observed for the purified β-(1→3)-D-glucan, that seems to be the most potent anti-inflammatory compound present in the polysaccharide extracts of C. militaris. In vivo, β-(1→3)-D-glucan also inhibited significantly the inflammatory phase of formalin-induced nociceptive response, and, in addition, it reduced the migration of total leukocytes but not the neutrophils induced by LPS. In conclusion, this study clearly demonstrates the anti-inflammatory effect of β-(1→3)-D-glucan. PMID:25330371

  17. Renewal of the Holocrine Meibomian Glands by Label-Retaining, Unipotent Epithelial Progenitors

    Directory of Open Access Journals (Sweden)

    Geraint J. Parfitt

    2016-09-01

    Full Text Available The meibomian and sebaceous glands secrete lipids to prevent desiccation of the ocular surface and skin, respectively. Precisely how these holocrine tissues regenerate is not well understood. To address this, we characterized keratin 5+ (K5 label-retaining cells (LRCs and the lineage tracing of keratin 14 (K14 progenitors in mouse meibomian glands. Using the tet-off H2B-GFP/K5tTA mouse, H2B-GFP fluorescence dilutes 2-fold with every division in K5+ cell nuclei after doxycycline administration. In 3D reconstructions generated over a >28-day doxycycline chase, we observed LRCs at the acinus entrance where K6+ ductal epithelium terminates. For lineage tracing, K14CreERT2-Confetti mice were injected intraperitoneally with tamoxifen and euthanized at 23 and 59 weeks later. Meibomian gland acini in these mice were either monochromatic or dual-colored, whereas the duct exhibited multiple colors. In conclusion, LRCs are likely to direct meibomian gland turnover and may exist as two distinct unipotent progenitors that renew ductal and acinar tissue separately.

  18. Histone Modification Is Involved in Okadaic Acid (OA Induced DNA Damage Response and G2-M Transition Arrest in Maize.

    Directory of Open Access Journals (Sweden)

    Hao Zhang

    Full Text Available Histone modifications are involved in regulation of chromatin structure. To investigate the relationship between chromatin modification and cell cycle regulation during plant cell proliferation, Okadaic acid (OA, a specific inhibitor of serine/threonine protein phosphatase, was applied in this study. The results showed that OA caused the cell cycle arrest at preprophase, leading to seedling growth inhibition. Western blotting assay revealed that the spatial distribution of phosphorylation of Ser10 histone H3 tails (H3S10ph signals was altered under OA treatment. Reactive oxygen species (ROS was found to be at higher levels and TdT-mediated dUTP nick end labeling (TUNEL assay displayed DNA breaks happened at the chromatin after treatment with OA, companied with an increase in the acetylation of histone H4 at lysine 5 (H4K5ac level. From these observations, we speculated that the alteration of the spatial distribution of H3S10ph and the level of H4K5ac was involved in the procedure that OA induced DNA breaks and G2-M arrested by the accumulation of ROS, and that the histone H3S10ph and H4K5ac might facilitate DNA repair by their association with the chromatin decondensation.

  19. Keratin 8 is required for the maintenance of architectural structure in thymus epithelium.

    Directory of Open Access Journals (Sweden)

    Chikako Odaka

    Full Text Available Keratins (Ks, the intermediate filament (IF proteins of epithelia, are coordinately expressed as pairs in a cell-lineage and differentiation manner. Cortical thymic epithelial cells (cTECs predominantly express the simple epithelium keratin 8/18 (K8/K18 pair, whereas medullary thymic epithelial cells (mTECs express the stratified epithelium K5/K14 pair, with TECs exhibiting K5 and K8 at the cortico-medullary junction in mature thymus. In the work reported here, we used wild-type (WT and K8-knockout (K8-null mice to address the contribution of K8/K18 IFs in the maintenance of the thymic epithelial structure. K8-null thymus maintained the differential cell segregation at the cortex versus the medulla observed in WT thymus, and the distribution of immature thymocytes at the cortex. The K8/K18 loss did not affect thymocyte development. However, it massively perturbed the TEC morphology both at the cortex and the medulla, along with a prominent depletion of cTECs. Such tissue alterations coincided with an increase in apoptosis and a reduced expression of Albatross (Fas-binding factor-1, also known for its capacity to bind K8/18 IFs. In addition, the K8/K18 loss affected the distribution of K5/K14-positive mTECs, but not their differentiation status. Together, the results indicate that K8/K18 IFs constitute key promoters of the thymic epithelium integrity.

  20. Infinitesimal-propagation equation for decoherence of an orbital-angular-momentum-entangled biphoton state in atmospheric turbulence

    CSIR Research Space (South Africa)

    Roux, FS

    2011-01-01

    Full Text Available ? |K8?|K6? F ?u,v,r,s 053822-4 INFINITESIMAL-PROPAGATION EQUATION FOR . . . PHYSICAL REVIEW A 83, 053822 (2011) ? (K5,K6,K7,K8,z)?K7|?K5| ? d2K5 4pi2 d2K6 4pi2 d2K7 4pi2 d2K8 4pi2 } = ? m,n,p,q ?m,n,p,q ? ?zFm,n,p,q (K1,K2,K3,K4,z) ?F... 2K6 4pi2 d2K7 4pi2 d2K8 4pi2 . (24) Substituting Eqs. (17) and (24) into Eq. (23) we obtain ?z?u,v,r,s(z) = trace { ? m,n,p,q ? |K1?|K3? ?m,n,p,q?zFm,n,p,q ? (K1,K2,K3,K4,z)?K2|?K4| d 2K1 4pi2 d2K2 4pi2 ? d2K3 4pi2 d2K4 4pi2...

  1. The potential of phosphate solubilizing bacteria isolated from sugarcane wastes for solubilizing phosphate

    Directory of Open Access Journals (Sweden)

    Atekan

    2014-07-01

    Full Text Available Most of P in agricultural soils is in unavailable forms for plant growth. Phosphate solubilizing bacteria can increase soil P availability. This study was aimed to isolate phosphate solubilizing bacteria from sugarcane waste compost and to test ability of the isolated bacterial to dissolve phosphate. The bacteria were isolated from three types of sugarcane waste, i.e. filter cake compost, bagasse compost, and a mixture of filter cake + bagasse + trash biomass compost. The potential colony was further purified by the Pikovskaya method on selective media. Eight isolates of phosphate solubilizing bacteria were obtained from all wasted studied. Amongst them, T-K5 and T-K6 isolates were superior in dissolving P from Ca3(PO42 in the media studied. The two isolates were able to solubilize P with solubilizing index of 1.75 and 1.67 for T-K5 and T-K6, respectively. Quantitatively, T-K6 isolate showed the highest P solubilization (0.74 mg / L, followed by T-K5 isolate (0.56 mg / L, while the lowest P solubilization (0.41 mg / L was observed for T-K4 isolate. The increase of soluble P was not always followed by the decrease in pH.

  2. The Role of Snow Thickness over Arctic Winter Sea Ice in the Survival and Dispersal of Brine-Derived Microbes

    Science.gov (United States)

    Deming, J. W.; Ewert, M.; Bowman, J. S.

    2013-12-01

    of -12 to 18°C, salinity range of 20 to 50), was originally isolated from Arctic marine sediments. The other isolate, the psychrotolerant and extremely halophilic bacterium Psychrobacter sp. strain 7E (temperature range of -1 [possibly lower] to 25°C, salinity range of 32 to 125), not only survived the most extreme conditions but demonstrated a potentially effective dispersal strategy of cell fragmentation and miniaturization (resulting in higher cell numbers). This extremophile was isolated from upper winter sea-ice brine in the Beaufort Sea. Bacterial survival and dispersal from sea-ice brines in Arctic winter thus appears to depend on the nature of the organisms involved and on the thickness of snow cover, which determines how dynamic and extreme are the exposure conditions. The observed species-specific reactions to extreme and fluctuating conditions may help to explain the different structures of microbial communities inhabiting the range of environments defined by the ice-snow system and provide model organisms and research directions for future work to evaluate potential activity or exchanges with other components of the system.

  3. Cell survival in a simulated Mars environment

    Science.gov (United States)

    Todd, Paul; Kurk, Michael Andy; Boland, Eugene; Thomas, David

    2016-07-01

    were introduced on the first day (less than 1 hour). All Samples were mixed into Mars regolith simulant for this test. Biological samples consisting of Cyanobacteria: Anabena sp., Chroococcidiopsis CCMEE171, Plectonema boryanum; Eubacteria: Bacillus subtilis, Pseudomonas aeruginosa, and Eukaryota: Chlorella ellipsoidia were maintained in the simulator under the above-described conditions. The exposed specimens were tested for intracellular esterase activity (fluorescein diacetate (FDA) hydrolysis), chlorophyll content (where appropriate) and reproductive survival (colony formation on nutrient plates). These tests all yielded low-level positive results indicating some survival in all cases. Three control populations of each species were simultaneously exposed to -80 C dark storage, +4 C dark storage, and +25 C diurnal cycles in the same Mars regolith simulant (Orbital Technologies, Madison, WI). The survival hierarchy based on intracellular esterase assay, in decreasing order of survival was Anabena > Chroococcidiopsis > Pseudomonas > Bacillus subtilis > Chlorella > Plectonema, and the range of survival based on this test was 8% - 50%. The survival hierarchy based on post-exposure colony growth was Plectonema > Chroococcidiopsis = Chlorella > Anabena, and Pseudomonas exhibited higher survival than Bacillus subtilis. These results indicate a need for longer-term high-fidelity planetary simulation studies of a wider variety of microbial species including extremophiles, such as psychrophilic strains like Psychrobacter spp., Planococcus halocryophilus, Rhodococcus sp. and the yeast Rhodotorula sp. that could be found in human environments. This research was supported by NASA NIAC Phase I Grant "Mars Ecopoiesis Testbed" NNX14AM97G.

  4. 大连湾石油污染沉积物中细菌群落结构分析%Bacterial communities in Dalian Bay petroleum pollution sediments

    Institute of Scientific and Technical Information of China (English)

    高小玉; 明红霞; 陈佳莹; 李江宇; 韩俊丽; 林凤翱; 樊景凤

    2014-01-01

    pollution.Bacterial community in the same place could maintain stability.Phylum Gam-maproteobacteria and Bacteroidetes were higher in the oil polluted sediment of Dalian Bay,which played an impor-tant role in the process of oil biodegradation.Phylum Firmicutes only detected in the area of low oil pollution.The sensitive pollution indicator Psychrobacter sp.could be used as biological indicator for further research.

  5. Transcription factor p53 can regulate proliferation, apoptosis and secretory activity of luteinizing porcine ovarian granulosa cell cultured with and without ghrelin and FSH.

    Science.gov (United States)

    Sirotkin, A V; Benco, A; Tandlmajerova, A; Vasícek, D; Kotwica, J; Darlak, K; Valenzuela, F

    2008-11-01

    The aim of our in vitro experiments was to examine the role of transcription factor p53 in controlling the basic functions of ovarian cells and their response to hormonal treatments. Porcine ovarian granulosa cells, transfected and non-transfected with a gene construct encoding p53, were cultured with ghrelin and FSH (all at concentrations of 0, 1, 10, or 100 ng/ml). Accumulation of p53, of apoptosis-related (MAP3K5) and proliferation-related (cyclin B1) substances was evaluated by immunocytochemistry. The secretion of progesterone (P(4)), oxytocin (OT), prostaglandin F (PGF), and E (PGE) was measured by RIA. Transfection with the p53 gene construct promoted accumulation of this transcription factor within cells. It also stimulated the expression of a marker of apoptosis (MAP3K5). Over-expression of p53 resulted in reduced accumulation of a marker of proliferation (cyclin B1), P(4), and PGF secretion and increased OT and PGE secretion. Ghrelin, when added alone, did not affect p53 or P(4), but reduced MAP3K5 and increased PGF and PGE secretion. Over-expression of p53 reversed the effect of ghrelin on OT, caused it to be inhibitory to P(4) secretion, but did not modify its action on MAP3K5, PGF, or PGE. FSH promoted the accumulation of p53, MAP3K5, and cyclin B1; these effects were unaffected by p53 transfection. These multiple effects of the p53 gene construct on luteinizing granulosa cells, cultured with and without hormones 1) demonstrate the effects of ghrelin and FSH on porcine ovarian cell apoptosis and secretory activity, 2) confirm the involvement of p53 in promoting apoptosis and inhibiting P(4) secretion in these cells, 3) provide the first evidence that p53 suppress proliferation of ovarian cells, 4) provide the first evidence that p53 is involved in the control of ovarian peptide hormone (OT) and prostaglandin (PGF and PGE) secretion, and 5) suggest that p53 can modulate, but probably not mediate, the effects of ghrelin and FSH on the ovary.

  6. 金黄地鼠腹侧前列腺在体修饰精子膜蛋白作用研究%Ventral Prostate Glands Modification of Sperm Membrane Proteins in Golden Hamster

    Institute of Scientific and Technical Information of China (English)

    骆建民; 郑玉鸾; 周白菡

    2008-01-01

    [Objective] To investigate the effect of the secretory proteins of the ventral prostate glands on the sperm membrane proteins in golden hamsters. [Methods] The sperm was collected from female hamsters uteri after mated with the males with or without ventral prostate gland. Male golden hamsters were divided into four experimental groups: (i) all accessory sex glands (ASG) removed; (ii) ventral prostate gland removed; (iii) all ASG removed except ventral prostate gland and (iv) sham-operated controls. Each group contained 6 hamsters. The sperm membrane proteins were extracted from uterine sperm and analyzed by SDS-PAGE and two dimension electrophoresis. [Results] The SDS-PAGE results of sperm membrane showed that the ventral prostate glands added up some proteins or increased the quantity of some proteins, which contained molecular mass (MM)15 k, 29 k, 38 k, 55 k, and 91 k proteins, to the sperm membrane. 2D-electrophoresis of sperm membrane showed that some extra protein spots were appeared in with ventral prostate gland groups, their MM and isoelectric point (IP) corresponding to 16 k/8.60, 16.6 k/9.20, 28 k/5.88, 28 k/6.10, 29 k/5.98, 32 k/6.35, 32 k/6.50, 32 k/7.20, 61 k/5.90,and 83 k/6.40, respectively. The quantity of some protein spots increased in sperm membrane of ventral prostate glands group, their MM/IP coresponding to 17 k/5.95, 17.5 k/6.50, 24 k/7.20, 26 k/5.40, 26 k/5.60, 27 k/7.20, 27 k/7.50, 28 k/5.70, 29 k/8.50, 42 k/6.50, and 42 k/7.00, respectively. [Conclusion] The ventral prostate gland secretion plays a role in regulating the sperm membrane proteins and the latter may in turn affect the male fertility or embryo development.%[目的]在整体水平探讨前列腺分泌蛋白对金黄地鼠精子膜蛋白的影响.[方法]雄性鼠手术分为4组,分别为附属性腺全去组,腹前列腺摘除组,去除其他附属性腺仅保留腹前列腺组和假手术组,每组动物6只.收集与保留前列腺及去除组的雄性鼠交配后的子宫

  7. Tropical response to extratropical eastward propagating waves

    Directory of Open Access Journals (Sweden)

    S. Sridharan

    2015-06-01

    Full Text Available Space–time spectral analysis of ERA-interim winds and temperature at 200 hPa for December 2012–February 2013 shows the presence of eastward propagating waves with period near 18 days in mid-latitude meridional winds at 200 hPa. The 18 day waves of k = 1–2 are dominantly present at latitudes greater than 80°, whereas the waves of k = 3–4 are dominant at 60° of both Northern and Southern Hemispheres. Though the 18 day wave of smaller zonal wavenumbers (k = 1–2 are confined to high latitudes, there is an equatorward propagation of the 18 day wave of k = 4 and 5. The wave amplitude of k = 5 is dominant than that of k = 4 at tropical latitudes. In the Northern Hemisphere (NH, there is a poleward tilt in the phase of the wave of k = 5 at mid-latitudes, as height increases indicating the baroclinic nature of the wave, whereas in the Southern Hemisphere (SH, the wave has barotropic structure as there is no significant phase variation with height. At the NH subtropics, the wave activity is confined to 500–70 hPa with moderate amplitudes. It is reported for the first time that the wave of similar periodicity (18 day and zonal structure (k = 5 as that of extratropical wave disturbance has been observed in tropical OLR, a proxy for tropical convection. We suggest that the selective response of the tropical wave forcing may be due to the lateral forcing of the eastward propagating extratropical wave of similar periodicity and zonal structure.

  8. Bone response to three different chemical compositions of fluorcanasite glass-ceramic.

    Science.gov (United States)

    da Rocha Barros, Valdemar Mallet; Liporaci, Jorge Luiz J; Rosa, Adalberto L; Junqueira, Marcela Caffarena; de Oliveira, Paulo Tambasco; Johnson, Anthony; van Noort, Richard

    2007-11-01

    The aim of this study was to evaluate the bone response to three fluorcanasite glass-ceramic compositions with different solubilities (K3, K5, and K8) after implantation in a femur rabbit model. Fluorcanasite glass-ceramic rods were implanted bilaterally in the mid-shafts rabbit femurs. Implants were harvested at 8 and 12 weeks and prepared for histological and histomorphometric analyses at the light microscope level. Bioglass 45S5 rods were used as a control material. At 8 weeks, all fluorcanasite glass-ceramics were entirely surrounded by a nonmineralized connective tissue. At 12 weeks, reduced areas of bone tissue were observed in the cortical area in direct contact with the K3 and K5 fluorcanasite glass-ceramics compared to Bioglass 45S5, whereas no bone tissue was observed in direct contact with the K8 surface. Bone-to-implant contact in the cortical area was affected by the material chemical composition and ranked as follows: Bioglass 45S5>K3>K5>K8 (p=0.001). In the bone marrow, a layer of fibrous connective tissue formed in direct contact with the fluorcanasite glass-ceramics and Bioglass 45S5, and only rarely exhibited contact osteogenesis. All the fluorcanasite glass-ceramics appeared to degrade in the biological environment. The solubility ratio did not alter significantly the biological reply of the fluorcanasite glass-ceramics in vivo. Further modifications of the chemical composition of the fluorcanasite glass-ceramic are required to increase the stability of the material in vivo.

  9. Pleistocene terrace deposition related to tectonically controlled surface uplift: An example of the Kyrenia Range lineament in the northern part of Cyprus

    Science.gov (United States)

    Palamakumbura, Romesh N.; Robertson, Alastair H. F.

    2016-06-01

    In this study, we consider how surface uplift of a narrow mountain range has interacted with glacial-related sea-level cyclicity and climatic change to produce a series of marine and non-marine terrace systems. The terrace deposits of the Kyrenia Range record rapid surface uplift of a long-lived tectonic lineament during the early Pleistocene, followed by continued surface uplift at a reduced rate during mid-late Pleistocene. Six terrace depositional systems are distinguished and correlated along the northern and southern flanks of the range, termed K0 to K5. The oldest and highest (K0 terrace system) is present only within the central part of the range. The K2-K5 terrace systems formed later, at sequentially lower levels away from the range. The earliest stage of surface uplift (K0 terrace system) comprises lacustrine carbonates interbedded with mass-flow facies (early Pleistocene?). The subsequent terrace system (K1) is made up of colluvial conglomerate and aeolian dune facies on both flanks of the range. The later terrace systems (K2 to K5) each begin with a basal marine deposit, interpreted as a marine transgression. Deltaic conglomerates prograded during inferred global interglacial stages. Overlying aeolian dune facies represent marine regressions, probably related to global glacial stages. Each terrace depositional system was uplifted and preserved, followed by subsequent deposits at progressively lower topographic levels. Climatic variation during interglacial-glacial cycles and autocyclic processes also exerted an influence on deposition, particularly on short-period fluvial and aeolian deposition.

  10. Efficacy of Prophylactic Ketamine in Preventing Postoperative Shivering

    Directory of Open Access Journals (Sweden)

    Emine Köse

    2012-04-01

    Full Text Available Aim: Treatment with ketamine and meperidine is effective in postoperative shivering. The aim of this study was to investigate the minimum effective dose of ketamine in the prevention of postanaesthetic shivering compared to placebo and meperidine. Material and Method: This prospective randomized double-blind study involved 150 ASA I and II patients undergoing general anesthesia. Patients were randomly allocated to receive normal saline (Group S, n=30, meperidine 20 mg (Group M, n=30, ketamine 0.1 mg/kg (Group K1, n=30, ketamine 0.25 mg/kg (Group K2, n=30 and ketamine 0.5 mg/ kg (Group K5, n=30 intravenously 20 minutes before completion of surgery. The anesthesia was induced with propofol 2 mg/kg, fentanyl 1 %u03BCg/kg and vecuronium 0.1 mg/kg. It was maintained with sevoflurane 2-3% and nitrous oxide 60% in oxygen. Tympanic temperature was measured immediately after induction of anesthesia, 30 minutes after induction and before administration of the study drug. Postoperative shivering was recorded using a four point scale and postoperative pain using a visual analogue scale (VAS ranging between 0 and 10. Results: The number of patients shivering on arrival the recovery room and at 10 minutes after operation were significantly less in Groups M and K5 than in Groups K1, K2 and Group S (p < 0.001 and p=0.001. The time to first analgesic requirement in Groups M and K5 was longer than in the Groups K1, K2 and Group S (P< 0.001. There was no difference between the five groups regarding VAS pain scores (p > 0.05. Discussion: Prophylactic usage of ketamine 0.5 mg/kg was effective to prevent postanaesthetic shivering, but ketamine 0.1 mg/kg and 0.25 mg/kg had no prophylactic effect.

  11. Telomerase-immortalized human mammary stem/progenitor cells with ability to self-renew and differentiate.

    Science.gov (United States)

    Zhao, Xiangshan; Malhotra, Gautam K; Lele, Subodh M; Lele, Manjiri S; West, William W; Eudy, James D; Band, Hamid; Band, Vimla

    2010-08-10

    There is increasing evidence that breast and other cancers originate from and are maintained by a small fraction of stem/progenitor cells with self-renewal properties. Whether such cancer stem/progenitor cells originate from normal stem cells based on initiation of a de novo stem cell program, by reprogramming of a more differentiated cell type by oncogenic insults, or both remains unresolved. A major hurdle in addressing these issues is lack of immortal human stem/progenitor cells that can be deliberately manipulated in vitro. We present evidence that normal and human telomerase reverse transcriptase (hTERT)-immortalized human mammary epithelial cells (hMECs) isolated and maintained in Dana-Farber Cancer Institute 1 (DFCI-1) medium retain a fraction with progenitor cell properties. These cells coexpress basal (K5, K14, and vimentin), luminal (E-cadherin, K8, K18, or K19), and stem/progenitor (CD49f, CD29, CD44, and p63) cell markers. Clonal derivatives of progenitors coexpressing these markers fall into two distinct types--a K5(+)/K19(-) type and a K5(+)/K19(+) type. We show that both types of progenitor cells have self-renewal and differentiation ability. Microarray analyses confirmed the differential expression of components of stem/progenitor-associated pathways, such as Notch, Wnt, Hedgehog, and LIF, in progenitor cells compared with differentiated cells. Given the emerging evidence that stem/progenitor cells serve as precursors for cancers, these cellular reagents represent a timely and invaluable resource to explore unresolved questions related to stem/progenitor origin of breast cancer.

  12. The Complementarity of the Loop to the Stem in DNA Pseudoknots Gives Rise to Local TAT Base-Triplets.

    Science.gov (United States)

    Reiling-Steffensmeier, Calliste; Marky, Luis A

    2016-01-01

    Pseudoknots belong to an RNA structural motif that has significant roles in the biological function of RNA. An example is ribosomal frameshifting; in this mechanism, the formation of a local triplex changes the reading frame that allows for differences in the translation of mRNAs. In this work, we have used a combination of temperature-dependent UV spectroscopy and differential scanning calorimetry (DSC) to determine the unfolding thermodynamics of a set of DNA pseudoknots with the following sequence: d(TCTCTTnAAAAAAAAGAGAT5TTTTTTT), where "Tn" is a thymine loop with n=5 (PsK-5), 7 (PsK-7), 9 (PsK-9), or 11 (PsK-11). All four oligonucleotides form intramolecular pseudoknots, and the increase in the length of this loop yielded more stable pseudoknots due to higher transition temperatures and higher unfolding enthalpies. This indicates formation of one and three TAT/TAT stacks in PsK-9 and PsK-11, respectively. We have flipped one AT for a TA base pair in the core stem of these pseudoknots, preventing in this way the formation of these base-triplet stacks. The DSC curves of these pseudoknots yielded lower unfolding enthalpies, confirming the formation of a local triplex in PsK-9 and PsK-11. Furthermore, we have investigated the reaction of PsK-5 and PsK-9 with their partially complementary strands: directly by isothermal titration calorimetry and indirectly by creating a Hess cycle with the DSC data. Relative to the PsK-5 reaction, PsK-9 reacts with its complementary strand with less favorable free energy and enthalpy contributions; this indicates PsK-9 is more stable and more compact due to the formation of a local triplex.

  13. Involvement of IL-9 in Th17-Associated Inflammation and Angiogenesis of Psoriasis

    Science.gov (United States)

    Singh, Tej Pratap; Schön, Michael P.; Wallbrecht, Katrin; Gruber-Wackernagel, Alexandra; Wang, Xiao-Jing; Wolf, Peter

    2013-01-01

    It is thought that a Th1/Th17-weighted immune response plays a predominant role in the pathogenesis of psoriasis. Our findings now indicate a link between IL-9, a Th2 and Th9 cytokine, and Th17 pathway in psoriasis. In K5.hTGF-β1 transgenic mice, exhibiting a psoriasis-like phenotype, we found increased IL-9R and IL-9 expression in the skin and intradermal IL-9 injection induced Th17-related inflammation. IL-9 also promoted angiogenesis and VEGF and CD31 overexpression in mice in vivo and increased tube formation of human endothelial cells in vitro. Injecting anti-IL-9 antibody into K5.hTGF-β1 transgenic mice not only diminished inflammation (including skin infiltration by T cells, monocytes/macrophages, and mast cells) and angiogenesis but also delayed the psoriasis-like skin phenotype. Notably, injection of anti-psoriatic acting anti-IL-17 antibody reduced skin IL-9 mRNA and serum IL-9 protein levels in K5.hTGF-β1 transgenic mice and prevented IL-9-induced epidermal hyperplasia and inflammation of the skin of wild type mice. In addition, we observed that IL-9R expression in lesional skin from psoriasis patients was markedly higher than in healthy skin from control subjects. Moreover, IL-9 significantly enhanced IL-17A production by cultured human peripheral blood mononuclear cells or CD4+ T cells, especially in psoriasis patients. Thus, IL-9 may play a role in the development of psoriatic lesions through Th17-associated inflammation and angiogenesis. PMID:23335955

  14. Involvement of IL-9 in Th17-associated inflammation and angiogenesis of psoriasis.

    Directory of Open Access Journals (Sweden)

    Tej Pratap Singh

    Full Text Available It is thought that a Th1/Th17-weighted immune response plays a predominant role in the pathogenesis of psoriasis. Our findings now indicate a link between IL-9, a Th2 and Th9 cytokine, and Th17 pathway in psoriasis. In K5.hTGF-β1 transgenic mice, exhibiting a psoriasis-like phenotype, we found increased IL-9R and IL-9 expression in the skin and intradermal IL-9 injection induced Th17-related inflammation. IL-9 also promoted angiogenesis and VEGF and CD31 overexpression in mice in vivo and increased tube formation of human endothelial cells in vitro. Injecting anti-IL-9 antibody into K5.hTGF-β1 transgenic mice not only diminished inflammation (including skin infiltration by T cells, monocytes/macrophages, and mast cells and angiogenesis but also delayed the psoriasis-like skin phenotype. Notably, injection of anti-psoriatic acting anti-IL-17 antibody reduced skin IL-9 mRNA and serum IL-9 protein levels in K5.hTGF-β1 transgenic mice and prevented IL-9-induced epidermal hyperplasia and inflammation of the skin of wild type mice. In addition, we observed that IL-9R expression in lesional skin from psoriasis patients was markedly higher than in healthy skin from control subjects. Moreover, IL-9 significantly enhanced IL-17A production by cultured human peripheral blood mononuclear cells or CD4+ T cells, especially in psoriasis patients. Thus, IL-9 may play a role in the development of psoriatic lesions through Th17-associated inflammation and angiogenesis.

  15. Transcriptome Profiling Reveals Degree of Variability in Induced Pluripotent Stem Cell Lines: Impact for Human Disease Modeling.

    Science.gov (United States)

    Schuster, Jens; Halvardson, Jonatan; Pilar Lorenzo, Laureanne; Ameur, Adam; Sobol, Maria; Raykova, Doroteya; Annerén, Göran; Feuk, Lars; Dahl, Niklas

    2015-10-01

    Induced pluripotent stem cell (iPSC) technology has become an important tool for disease modeling. Insufficient data on the variability among iPSC lines derived from a single somatic parental cell line have in practice led to generation and analysis of several, usually three, iPSC sister lines from each parental cell line. We established iPSC lines from a human fibroblast line (HDF-K1) and used transcriptome sequencing to investigate the variation among three sister lines (iPSC-K1A, B, and C). For comparison, we analyzed the transcriptome of an iPSC line (iPSC-K5B) derived from a different fibroblast line (HDF-K5), a human embryonic stem cell (ESC) line (ESC-HS181), as well as the two parental fibroblast lines. All iPSC lines fulfilled stringent criteria for pluripotency. In an unbiased cluster analysis, all stem cell lines (four iPSCs and one ESC) clustered together as opposed to the parental fibroblasts. The transcriptome profiles of the three iPSC sister lines were indistinguishable from each other, and functional pathway analysis did not reveal any significant hits. In contrast, the expression profiles of the ESC line and the iPSC-K5B line were distinct from that of the sister lines iPSC-K1A, B, and C. Differentiation to embryoid bodies and subsequent analysis of germ layer markers in the five stem cell clones confirmed that the distribution of their expression profiles was retained. Taken together, our observations stress the importance of using iPSCs of different parental origin rather than several sister iPSC lines to distinguish disease-associated mechanisms from genetic background effects in disease modeling.

  16. p53 deficiency induces cancer stem cell pool expansion in a mouse model of triple-negative breast tumors.

    Science.gov (United States)

    Chiche, A; Moumen, M; Romagnoli, M; Petit, V; Lasla, H; Jézéquel, P; de la Grange, P; Jonkers, J; Deugnier, M-A; Glukhova, M A; Faraldo, M M

    2016-10-24

    Triple-negative breast cancer is a heterogeneous disease characterized by the expression of basal cell markers, no estrogen or progesterone receptor expression and a lack of HER2 overexpression. Triple-negative tumors often display activated Wnt/β-catenin signaling and most have impaired p53 function. We studied the interplay between p53 loss and Wnt/β-catenin signaling in stem cell function and tumorigenesis, by deleting p53 from the mammary epithelium of K5ΔNβcat mice displaying a constitutive activation of Wnt/β-catenin signaling in basal cells. K5ΔNβcat transgenic mice present amplification of the basal stem cell pool and develop triple-negative mammary carcinomas. The loss of p53 in K5ΔNβcat mice led to an early expansion of mammary stem/progenitor cells and accelerated the formation of triple-negative tumors. In particular, p53-deficient tumors expressed high levels of integrins and extracellular matrix components and were enriched in cancer stem cells. They also overexpressed the tyrosine kinase receptor Met, a feature characteristic of human triple-negative breast tumors. The inhibition of Met kinase activity impaired tumorsphere formation, demonstrating the requirement of Met signaling for cancer stem cell growth in this model. Human basal-like breast cancers with predicted mutated p53 status had higher levels of MET expression than tumors with wild-type p53. These results connect p53 loss and β-catenin activation to stem cell regulation and tumorigenesis in triple-negative cancer and highlight the role of Met signaling in maintaining cancer stem cell properties, revealing new cues for targeted therapies.Oncogene advance online publication, 24 October 2016; doi:10.1038/onc.2016.396.

  17. Modeling quasi-static magnetohydrodynamic turbulence with variable energy flux

    CERN Document Server

    Verma, Mahendra K

    2014-01-01

    In quasi-static MHD, experiments and numerical simulations reveal that the energy spectrum is steeper than Kolmogorov's $k^{-5/3}$ spectrum. To explain this observation, we construct turbulence models based on variable energy flux, which is caused by the Joule dissipation. In the first model, which is applicable to small interaction parameters, the energy spectrum is a power law, but with a spectral exponent steeper than -5/3. In the other limit of large interaction parameters, the second model predicts an exponential energy spectrum and flux. The model predictions are in good agreement with the numerical results.

  18. China Report, Science & Technology

    Science.gov (United States)

    2007-11-02

    with a tungsten tip argon arc to observe the solidification of a Hf-rich melt. The solidified samples were analyzed with metallography, quantitative...sulfides. 2.4 Skin Effect of Hf-Rich Melts In the argon arc weld of a K5H plate with a tungsten tip, a thin Hf-rich layer was found near the weld and the...hole sur- faces in ingots with more than 1.5 percent Hf by weight often had a bronze - colored surface layer. Electron microprobe analysis showed that

  19. Isolation of Klebsiella terrigena from clinical specimens.

    Science.gov (United States)

    Podschun, R; Ullmann, U

    1992-04-01

    In a three-year survey conducted from 1988 to 1990 Klebsiella isolates from human clinical specimens were subjected to additional tests to identify any Klebsiella terrigena strains. Ten strains of Klebsiella terrigena (0.4%) were found among 2355 indole-negative Klebsiella isolates. Most of the isolates were recovered from the respiratory tract. In the API20EC system almost exclusively biotypes no. 1777771 and 1777671 were observed. Serotyping revealed capsule types K2, K5 and K18 in two strains each. In antibiotic susceptibility tests the strains were shown to be comparable in sensitivity to Klebsiella pneumoniae.

  20. Heavy Hyperfragments produced by 800 MeV/c k in Nuclear Emulsions; Hiperfragmentos pesados producidos por K de 800 MeV c en emulsiones nucleares

    Energy Technology Data Exchange (ETDEWEB)

    Marcial, P.

    1967-07-01

    A statistical and phenomenological survey of nearly 1200 heavy hyperfragments produced by interaction of 800 MeV/c K with the heavy nuclei of llford K{sub 5} emulsion is presented. The emulsion was exposed A statistical and phenomenological survey of nearly 1200 heavy hyperfragments produced by interaction of 800 MeV/c K with the heavy nuclei of llford K5 emulsion is presented. The emulsion was exposed in Berkeley. The variation of long list of parameters dealing with both the production and desintegration of the hyperfragments, with the size of the primary interaction is given. (Author)

  1. Study of Competitive Chelating Reaction between Lanthanum and Tribromoarsenazo in the Medium of Weak Acid by Capillary Zone Electrophoresis

    Institute of Scientific and Technical Information of China (English)

    胡涌刚; 周培疆; 邓延倬; 程介克

    2003-01-01

    Two kinds of metal chelates of rare earth elements reacted with tribrimoarsenazo formed under the condition of critic acid were observed by simultaneous technique of capillary electrophoresisphotothermal interference spectrometry. The tendency of the conversion between these chelates as functions of the mole ratio of the reagent and the metal, pH value and the elapsing time was investigated. Kinetic equation of competitive chelating reaction between the TBA-La (Ⅲ) and La (Ⅲ) -critic acid were established. It was found that the competitive chelating reaction follows secondorder kinetics, for this second-order reaction, k=5.55 L·mol-1·S-1.

  2. Selective oxidation of primary substituted aromatic amines to azoxy products using lacunary catalyses

    Institute of Scientific and Technical Information of China (English)

    A.Nezhadali; M.Akbarpour

    2010-01-01

    Some of the substituted anilines were selectively converted in to the corresponding azoxy and azobenzenes by oxidation with 30%aqueous hydrogen peroxide.The reactions were catalyzed by various heteropolyoxometalates,at boiling point of the used solvents.An improvement in the product yield and selectivity towards azoxybenzens was also observed.Azobenzenes was obtained as by-product.In the all similar cases,the highest yield of azoxy compounds was observed using K_5PW_(11) ZnO_(39) as catalyst in N,N-dimet...

  3. Pengaruh Konsentrsi Campuran Sari Buah Nenas Dan Markisa Serta Konsentrasi Pektin Terhadap Mutu Sorbet Air Kelapa

    OpenAIRE

    Surbakti, Florenta

    2011-01-01

    The aim of this research was to find the effect of pineapple and passion fruit extract concentration and pectin concentration on the quality of coconut water sorbet. The research had been performed using factorial completely randomized design with two factors, i.e; mixture of pineapple and passion fruit extract concentration (1:2) (K) : (5%, 10%, 15% and 20%) and pectin concentration (P) : (0,4%, 0,6%, 0,8% and 1%). Parameters analyzed were vitamin C content, total acid, melting percentage, ...

  4. Estimation of Boundary Conditions for Coastal Models,

    Science.gov (United States)

    1974-09-01

    equation: h(i) y ( t — i) di (3) The solution to Eq. (3) may be obtained by Fourier transformation. Because covariance function and spectral density function form...the cross— spectral density function estimate by a numerical Fourier transform, the even and odd parts of the cross—covariance function are determined...by A(k) = ½ [Y ~~ (k) + y (k)] (5) B(k) = ½ [Yxy (k) - y (k) ] (6) from which the co— spectral density function is estimated : k m—l -. C (f) = 2T[A(o

  5. Turbulent pair separation due to multi scale stagnation point structure and its time asymmetry in two-dimensional turbulence

    OpenAIRE

    Faber, Tristan; Vassilicos, J. C.

    2008-01-01

    The pair separation model of Goto and Vassilicos (S Goto and J C Vassilicos, 2004, New J.Phys., 6, p.65) is revisited and placed on a sound mathematical foundation. A DNS of two dimensional homogeneous isotropic turbulence with an inverse energy cascade and a k^{-5/3} power law is used to investigate properties of pair separation in two dimensional turbulence. A special focus lies on the time asymmetry observed between forward and backward separation. Application of the present model to this ...

  6. Pengembangan Produk Bakso Kedelai (Soyballs) dengan Penambahan Gluten Serta Pati Dari Ubi Kayu, Ubi Jalar, Jagung dan Kentang

    OpenAIRE

    Pramudya, Mhd. Reza

    2015-01-01

    The aim of this research was to evaluate the effect of a meat substitute soy composite flour or tofu and gluten with the addition of different starch (cassava starch, sweet potato, corn and potatoes) on the physicochemical characteristics of soyballs. Flour composites were made by mixing soy flour or okara flour and gluten with 6 levels of ratio i.e : K1 = 80%: 20%, K2 = 70%: 30%, K3 = 60%: 40%, K4 = 80%: 20 %, K5 = 70%: 30%, K6 = 60%: 40%, and then proximate analysis and water absorpt...

  7. Pressure dependence of magnetic properties in Fe-Mn-B amorphous alloys: evidence for inhomogeneous ferromagnetism.

    Science.gov (United States)

    Kiss, L F; Kemény, T; Bednarčík, J; Kamarád, J; Arnold, Z; Konôpková, Z; Liermann, H-P

    2013-08-28

    The pressure dependence of the saturation magnetization and Curie temperature was studied in melt-spun Fe60Mn20B20, Fe56Mn24B20 and Fe75B25 amorphous alloys up to 0.9 GPa, corresponding to volume changes up to 0.45%. In addition, in situ high-pressure (up to 40 GPa) x-ray diffraction was performed to determine the compressibility of the latter two alloys. Both the Curie temperature TC (at atmospheric pressure TC = 201 ± 3 and 159 ± 3 K) and the low-temperature saturation magnetization M5 K,5 T decrease remarkably with increasing pressure: dTC/dp =- 31 ± 0.5 and -32 ± 5 K GPa(-1) and dlnM5 K,5 T/dp =- 0.15 ± 0.02 and -0.13 ± 0.03 GPa(-1) for xMn = 20 and 24 at.%, respectively. Compared to dlnM5 K,5 T/dp =- 0.016 ± 0.003 GPa(-1) measured for Fe75B25, the pressure dependence of M5 K,5 T is one order of magnitude larger in the ternary alloys. The bulk moduli for the Fe56Mn24B20 and Fe75B25 glasses were measured to be 152 GPa and 173 GPa, respectively. These data are also compared with the pressure dependence of the hyperfine field and theoretical calculations of the saturation moment for Fe-B alloys reported in the literature. The results were interpreted within an inhomogeneous itinerant-electron model of ferromagnetism.

  8. The intrinsic values and color excesses of (B-V) for 115 F-K supergiants

    Science.gov (United States)

    Kelsall, T.

    1972-01-01

    Color excesses in B-V are determined indirectly from a study of Stromgren's b-y color for a sample of F0 - K5 supergiants. The resulting E(B-V)'s are estimated to have an expected precision of + or - 0.05. With the calculated color excesses and the observed values of B-V given in various catalogs, the run of B-V with spectral type is obtained. This B-V/(spectral type) relationship is compared with those found previously by other investigators.

  9. Novel Approaches to Breast Cancer Prevention and Inhibition of Metastases

    Science.gov (United States)

    2014-10-01

    RANK in mammary cancer. Background: My group generated the first RANKL mutant mice, providing definitive proof that RANKL (OPGL, TRANCE, or ODF) is...stem cell expansion is impaired in both WapCre Rank/BRCA1/p53 triple KO mice and K5Cre Rank/BRCA1/p53 triple KO mice (not shown). Moreover, purified ...America) subcutaneously on the right flank. 200l DMBA (5mg/ml diluted in cottonseed oil ) was administered by oral gavage 6 times throughout the

  10. Advanced High Cycle Fatigue (HCF) Life Assurance Methodologies

    Science.gov (United States)

    2004-07-01

    Kk Rcaa σπ σπ (K5) Note that ao and co depend on the assumed aspect ratio of a vanishing small initiated crack through the dependence of the...constant/,0,0()( 1,/ ⎥ ⎦ ⎤ ⎢ ⎣ ⎡ =→→∆ ∆ = ⎥ ⎦ ⎤ ⎢ ⎣ ⎡ =→→∆ ∆ = iRcie th io iRaie th io RfcacafR K Rcac RfcacafR K Rcaa σπ σπ (K6) It is clear from

  11. 起亚全新车型K9

    Institute of Scientific and Technical Information of China (English)

    肖昕

    2012-01-01

    车型平台源自雅科仕。外观造型出自大师手笔一如K2与瑞纳、K5与索纳塔的兄弟关系,K9也自然而然地继承了雅科仕的车型平台。不过出自设计大师彼得·希瑞尔手笔的K9显然不像保守的雅科仕那么死气沉沉,

  12. Synthesis, Characterization, and Flocculation Properties of Branched Cationic Polyacrylamide

    Directory of Open Access Journals (Sweden)

    Weimin Sun

    2013-01-01

    Full Text Available A water soluble branched cationic polyacrylamide (BCPAM was synthesized using solution polymerization. The polymerization was initiated using potassium diperiodatocuprate, K5[Cu(HIO62](Cu(III, initiating the self-condensing vinyl copolymerization of acrylamide and acryloxyethyltrimethyl ammonium chloride (DAC monomer. The resulting copolymer was characterized by the use of Fourier-transform infrared (FTIR spectroscopy and nuclear magnetic resonance (NMR spectroscopy. Its flocculation properties were evaluated with standard jar tests of sewage. The effects of initiator concentration, monomer concentration, reaction temperature, and the mass ratio of monomers on intrinsic viscosity and flocculation properties of the product were determined using single-factor experiments and orthogonal experiment.

  13. Up the Technology Readiness Level (TRL) Scale to Demonstrate a Robust, Long Life, Liquid Rocket Engine Combustion Chamber, or...Up the Downstairs

    Science.gov (United States)

    Holmes, Richard; Elam, Sandra; McKechnie, Timothy; Power, Christopher

    2008-01-01

    Advanced vacuum plasma spray (VPS) technology, utilized to successfully apply thermal barrier coatings to space shuttle main engine turbine blades, was further refined as a functional gradient material (FGM) process for space furnace cartridge experiments at 1600 C and for robust, long life combustion chambers for liquid rocket engines. A VPS/FGM 5K (5,000 lb. thrust) thruster has undergone 220 hot firing tests, in pristine condition, showing no wear, blanching or cooling channel cracks. Most recently, this technology has been applied to a 40K thruster, with scale up planned for a 194K Ares I, J-2X engine.

  14. On digit patterns in expansions of rational numbers with prime denominator

    CERN Document Server

    Shparlinski, Igor E

    2012-01-01

    We show that, for any fixed $\\varepsilon > 0$ and almost all primes $p$, the $g$-ary expansion of any fraction $m/p$ with $\\gcd(m,p) = 1$ contains almost all $g$-ary strings of length $k < (5/24 - \\varepsilon) \\log_g p$. This complements a result of J. Bourgain, S. V. Konyagin, and I. E. Shparlinski that asserts that, for almost all primes, all $g$-ary strings of length $k < (41/504 -\\varepsilon) \\log_g p$ occur in the $g$-ary expansion of $m/p$.

  15. Studies of Near-Source and Near-Receiver Scattering and Low-Frequency Lg from East Kazakh and NTS Explosions

    Science.gov (United States)

    1991-12-04

    37.00 61 1 OMANO 515 58 62 TORTUGAS 640 63 MUNDO 567 64 CAPROCK 600 66 CORREO 335 -116.10 -116.00 Figure 1. Location map of 39 Yucca Flat shots with 13...E,K) 5.385 2.100 0.6400 0.6520 66 02 Aug 1984 CORREO (E,K) 4.669 1.305 0.3350 0.4700 Note: Stations recording the event are denoted by E (ELK) and K

  16. Field Surveys, IOC Valleys. Volumes II-I and II-II. Biological Resources Survey, Dry Lake Valley, Nevada and Pine and Wah Wah Valleys, Utah. Supplement. Spring Survey of the IOC Valleys.

    Science.gov (United States)

    1981-08-01

    pinnata X K CACTACEAE Coryphantha vivipara x Opuntia echinocarpa K 0 x K K K 5putaerinacea K Op’untia sp. x X -12- TABLE 3-1 (Cont.) Shelter site...pilosus x Lepidium montanun X CACTACEAE Opuntia echinocarpa x x Opuntia erinacea X X X CHENOPODIACEAE Atriplex canescens X X X Ceratoides lanata X X X X...Stanleya pinnata X CACTACEAE Coryphantha vivipara var. rosea X Echinocereus engelmannii X opuntia echinocarpa X X X X X X X X Opuntia erinacea XX X X X X x

  17. Quantitation of heparosan with heparin lyase III and spectrophotometry.

    Science.gov (United States)

    Huang, Haichan; Zhao, Yingying; Lv, Shencong; Zhong, Weihong; Zhang, Fuming; Linhardt, Robert J

    2014-02-15

    Heparosan is Escherichia coli K5 capsule polysaccharide, which is the key precursor for preparing bioengineered heparin. A rapid and effective quantitative method for detecting heparosan is important in the large-scale production of heparosan. Heparin lyase III (Hep III) effectively catalyzes the heparosan depolymerization, forming unsaturated disaccharides that are measurable using a spectrophotometer at 232 nm. We report a new method for the quantitative detection of heparosan with heparin lyase III and spectrophotometry that is safer and more specific than the traditional carbazole assay. In an optimized detection system, heparosan at a minimum concentration of 0.60 g/L in fermentation broth can be detected.

  18. How Architecture-Driven Modernization Is Changing the Game in Information System Modernization

    Science.gov (United States)

    2010-04-01

    AVAILABILITY STATEMENT Approved for public release; distribution unlimited 13. SUPPLEMENTARY NOTES Presented at the 22nd Systems and Software Technology ...Cobra Dane Ada/Fortran ‐ C++ 380K 8 mo. Raytheon Satellites Ada/Fortran ‐ C++ 284K 5 mo. L‐3 VTT Ada ‐ C++ 77K 3 mo. LMCO SAC Strategic Planning...And Technology Intensive Tool Interoperability Enables More Comprehensive Solutions For Complex Problems To Interoperate Tools Need To Interchange

  19. 猪早期孤雌胚组蛋白乙酰化与组蛋白去乙酰化酶基因mRNA表达水平相关性研究%Study on Relationship Between Histone Acetylation and mRNA Expression Level of Histone Deacetylase of Porcine Early Parthenogenetic Embryos

    Institute of Scientific and Technical Information of China (English)

    赵彦玲; 任子利; 宁淑芳; 杨小淦; 卢晟盛; 卢克焕

    2011-01-01

    [目的]探讨猪孤雌胚早期发育过程中组蛋白H4K5乙酰化水平与组蛋白去乙酰化酶(HDAC1)基因mRNA 表达水平之间的关系.[方法]收集早期猪孤雌胚(2-细胞,4-细胞、桑椹胚和囊胚),运用细胞免疫组化和激光共聚焦显微镜,通过检测这些胚胎的相对荧光强度来评判其H4K5的乙酰化水平;运用实时定量PCR的方法检测猪早期孤雌胚发育过程中HDAC1基因mRNA表达的动态变化.[结果]从2-细胞到囊胚开始,其H4K5的乙酰化均在细胞核内表达,且各阶段表达量逐步提高,至囊胚期达最高(分别为1124.77土127.78,1305.81土184.23,1795.19-±318.67及2149.63土529.47),差异显著(P<0.05);从2-细胞到囊胚,其HDAC1基因mRNA表达逐步降低(分别为1.00土0、0.91土0.009、0.85土0.008及0.67土0.006),各阶段差异显著(P<0.05).[结论]从2-细胞到囊胚,其H4K5的乙酰化水平与HDAC1基因mRNA表达水平之间呈负相关.%[Objective]The aims of this study were to investigate the relationship between the levels of histone acetylation (AcH4K5) and mRNA expression level of histone deacetylase 1(HDAC1) during early development of porcine parthenogenetic(PA) embryos in vitro.[Method]Porcine PA embryos (2-cell, 4-cell, morula and blastocyst) were collected, histone acetylation levels of AcH4K5 of four states' embryos were assessed using immunofluorescence and laser confocal microscope by detecting the fluorescence intensity.Real-time PCR method was used for quantitative analysis of HDAC1 mRNA level in PA embryos.[Result]The results showed that AcH4K5 expressed in nucleolus of all embryos from 2-cell to blastocyst, and the levels of AcH4K5 expression increased gradually, reached the highest in blastocyst stage, and the expression at each stage was different significantly(1124.77±127.78, 1305.81±184.23, 1795.19±318.67, and 2149.63±529.47, P<0.05, respectively).There were dynamic changes of HDAC1 mRNA level among four states'embryos (2-cell, 4-cell

  20. Up the Technology Readiness Level (TRL) Scale to Demonstrate a Robust, Long Life, Liquid Rocket Engine Combustion Chamber, or...Up the Downstairs

    Science.gov (United States)

    Holmes, Richard; Elam, Sandra; McKechnie, Timothy; Power, Christopher

    2008-01-01

    Advanced vacuum plasma spray (VPS) technology, utilized to successfully apply thermal barrier coatings to space shuttle main engine turbine blades, was further refined as a functional gradient material (FGM) process for space furnace cartridge experiments at 1600 C and for robust, long life combustion chambers for liquid rocket engines. A VPS/FGM 5K (5,000 lb. thrust) thruster has undergone 220 hot firing tests, in pristine condition, showing no wear, blanching or cooling channel cracks. Most recently, this technology has been applied to a 40K thruster, with scale up planned for a 194K Ares I, J-2X engine.

  1. Thermal damage study on diamond tools at varying laser heating time and temperature by Raman spectroscopy and SEM

    CSIR Research Space (South Africa)

    Masina, BN

    2011-07-01

    Full Text Available damage study on diamond tools at varying laser heating time and temperature by Raman spectroscopy and SEM BN Masina1, BW Mwakikunga2, M Elayaperumal2, A Forbes1, and R Bodkin3 1CSIR National Laser Centre, PO BOX 395, Pretoria 0001, South Africa 2CSIR... Slide 11 Optical images at the surface of the PCD layer Initial 15 min 968 K 25 min 979 K 5 min 895 K Dark phase is cobalt or tungsten Grey phase is diamond Slide 12 Raman shift at the surface of the PCD layer 600 800 1000 1200 1400 1600 1800 2000 0 2000...

  2. Ramjet and Ramrocket Propulsion Systems for Missiles Held at Monterey, California, London (United Kingdom), and Neubiberg (Germany F. R.) on 5-6; 10-11 and 13-14 September 1984

    Science.gov (United States)

    1984-10-01

    stockage de longus durge, car is combustibie peut Atre totalement isoiA et sans contact avec des mat~riaux organiques ou plastiques , une membrane m~taiiique...40. c * - i .4 tdq. -r x 0-o𔃾 - t.c4>cC .-n. w. .4 w-l C.00 as-c~ c -’- . IT 0S, I,.N s Sac ci vu CIf m A x. K,5t -o u -. cM u0 . , 01 0(a.z4 I. 0

  3. Generalizing on Multiple Grounds: Performance Learning in Model-Based Troubleshooting

    Science.gov (United States)

    1989-02-01

    57 5 Similar = Same Fault Hypothesis 58 5.1 Fault Hypotheses ........................................ 58 5.2 Generalizing Fault Envisionments ...59 5.2.1 Utility of EBG on Envisionments ..... ................ 61 5.3 Lifting Fault Hypotheses...5.2. GENERALIZING FAULT ENVISIONMENTS 59 A= A= A10 A1 B=3L- B=k5 C= y C=2-4 D=E2 Y 1 D= M2E= =12 E=3--EM3---- S ()(b) Figure 5.1: The Polybox Circuit

  4. Mouse Genetic Models Reveal Surprising Functions of IκB Kinase Alpha in Skin Development and Skin Carcinogenesis

    Energy Technology Data Exchange (ETDEWEB)

    Xia, Xiaojun [The Methodist Hospital Research Institute, Houston, TX 77030 (United States); Park, Eunmi [Department of Radiation Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02115 (United States); Fischer, Susan M. [Department of Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Smithville, TX 78967 (United States); Hu, Yinling, E-mail: huy2@mail.nih.gov [Cancer and Inflammation Program, Center for Cancer Research, Frederick National Laboratory for Cancer Research, Frederick, MD 21701 (United States)

    2013-02-15

    Gene knockout studies unexpectedly reveal a pivotal role for IκB kinase alpha (IKKα) in mouse embryonic skin development. Skin carcinogenesis experiments show that Ikkα heterozygous mice are highly susceptible to chemical carcinogen or ultraviolet B light (UVB) induced benign and malignant skin tumors in comparison to wild-type mice. IKKα deletion mediated by keratin 5 (K5).Cre or K15.Cre in keratinocytes induces epidermal hyperplasia and spontaneous skin squamous cell carcinomas (SCCs) in Ikkα floxed mice. On the other hand, transgenic mice overexpressing IKKα in the epidermis, under the control of a truncated loricrin promoter or K5 promoter, develop normal skin and show no defects in the formation of the epidermis and other epithelial organs, and the transgenic IKKα represses chemical carcinogen or UVB induced skin carcinogenesis. Moreover, IKKα deletion mediated by a mutation, which generates a stop codon in the Ikkα gene, has been reported in a human autosomal recessive lethal syndrome. Downregulated IKKα and Ikkα mutations and deletions are found in human skin SCCs. The collective evidence not only highlights the importance of IKKα in skin development, maintaining skin homeostasis, and preventing skin carcinogenesis, but also demonstrates that mouse models are extremely valuable tools for revealing the mechanisms underlying these biological events, leading our studies from bench side to bedside.

  5. Hubble Space Telescope Constraints on the Winds and Astrospheres of Red Giant Stars

    CERN Document Server

    Wood, Brian E; Harper, Graham M

    2016-01-01

    We report on an ultraviolet spectroscopic survey of red giants observed by the Hubble Space Telescope, focusing on spectra of the Mg II h & k lines near 2800 A in order to study stellar chromospheric emission, winds, and astrospheric absorption. We focus on spectral types between K2 III and M5 III, a spectral type range with stars that are noncoronal, but possessing strong, chromospheric winds. We find a very tight relation between Mg II surface flux and photospheric temperature, supporting the notion that all K2-M5 III stars are emitting at a basal flux level. Wind velocities (V_w) are generally found to decrease with spectral type, with V_w decreasing from ~40 km/s at K2 III to ~20 km/s at M5 III. We find two new detections of astrospheric absorption, for Sigma Pup (K5 III) and Gamma Eri (M1 III). This absorption signature had previously only been detected for Alpha Tau (K5 III). For the three astrospheric detections the temperature of the wind after the termination shock correlates with V_w, but is low...

  6. Baroclinic stationary waves in aquaplanet models

    CERN Document Server

    Zappa, Giuseppe; Navarra, Antonio; 10.1175/2011JAS3573.1

    2011-01-01

    An aquaplanet model is used to study the nature of the highly persistent low frequency waves that have been observed in models forced by zonally symmetric boundary conditions. Using the Hayashi spectral analysis of the extratropical waves, we find that a quasi-stationary (QS) wave five belongs to a wave packet obeying a well defined dispersion relation with eastward group velocity. The components of the dispersion relation with k>5 baroclinically convert eddy available potential energy into eddy kinetic energy, while those with k<5 are baroclinically neutral. In agreement with the Green's model of baroclinic instability, the wave five is weakly unstable, and the inverse energy cascade, which had been previously proposed as a main forcing for this type of waves, only acts as a positive feedback on its predominantly baroclinic energetics. The QS wave is reinforced by a phase lock to an analogous pattern in the tropical convection, which provides further amplification to the wave. We also find that the Pedlos...

  7. V4046 Sgr: Touchstone to Investigate Spectral Type Discrepancies for Pre-main Sequence Stars

    CERN Document Server

    Kastner, Joel H; Sargent, Benjamin; Smith, C T; Rayner, John

    2014-01-01

    Determinations of the fundamental properties (e.g., masses and ages) of late-type, pre-main sequence (pre-MS) stars are complicated by the potential for significant discrepancies between the spectral types of such stars as ascertained via optical vs. near-infrared observations. To address this problem, we have obtained near-IR spectroscopy of the nearby, close binary T Tauri system V4046 Sgr AB with the NASA Infrared Telescope Facility (IRTF) SPEX spectrometer. The V4046 Sgr close binary (and circumbinary disk) system provides an important test case for spectral type determination thanks to the stringent observational constraints on its component stellar masses (i.e., ~0.9 Msun each) as well as on its age (12-21 Myr) and distance (73 pc). Analysis of the IRTF data indicates that the composite near-IR spectral type for V4046 Sgr AB lies in the range M0-M1, i.e., significantly later than the K5+K7 composite type previously determined from optical spectroscopy. However, the K5+K7 composite type is in better agre...

  8. Geometric Simulation Approach for Grading and Assessing the Thermostability of CALBs

    Directory of Open Access Journals (Sweden)

    B. Senthilkumar

    2016-01-01

    Full Text Available Candida antarctica lipase B (CALB is a known stable and highly active enzyme used widely in biodiesel synthesis. In this work, the stability of native (4K6G and mutant (4K5Q CALB was studied through various structural parameters using conformational sampling approach. The contours of polar surface area and surface area of mutant CALB were 11357.67 Å2 and 30007.4 Å2, respectively, showing an enhanced stability compared to native CALB with a statistically significant P value of < 0.0001. Moreover, simulated thermal denaturation of CALB, a process involving dilution of hydrogen bond, significantly shielded against different intervals of energy application in mutant CALB revealing its augmentation of structural rigidity against native CALB. Finally, computational docking analysis showed an increase in the binding affinity of CALB and its substrate (triglyceride in mutant CALB with Atomic Contact Energy (ACE of −91.23 kcal/mol compared to native CALB (ACE of −70.3 kcal/mol. The computational observations proposed that the use of mutant CALB (4K5Q could serve as a best template for production of biodiesel in the future. Additionally, it can also be used as a template to identify efficient thermostable lipases through further mutations.

  9. Pulse radiolysis studies of intramolecular electron transfer in model peptides and proteins. 7. Trp -> TyrO radical transformation in hen egg-white lysozyme. Effects of pH, temperature, Trp62 oxidation and inhibitor binding

    DEFF Research Database (Denmark)

    Bobrowski, K.; Holcman, J.; Poznanski, J.

    1997-01-01

    (.). Arrhenius plots of the temperature-dependence of k(5) showed that the activation energy of LRET varies both with temperature and the protonation state of the enzyme. The activation energies are in the range 7.6-56.0 kJ mol(-1) and are similar to those for activation of amide hydrogen exchange in native HEWL...... below its denaturation temperature. Selective oxidation by ozone of the Trp62 indole side-chain in HEWL to N'-formylkynurenine (NFKyn62-HEWL) caused a large drop in the initial yield of Trp(.) radicals, G(Trp(.))(i). This was accompanied by a relatively small decrease in k(5) but selective oxidation...... by ozone had a pronounced effect on its temperature-dependence. Taken together these observations indicate that of the six tryptophans present in HEWL Trp62 contributes about 50% to the yield of the observed LRET. In the enzyme-inhibitor complex, HEWL(GlcNAc)(3), where Trp62 and Trp63 are completely...

  10. Caged fluorescent haptens reveal the generation of cryptic epitopes in allergic contact dermatitis.

    Science.gov (United States)

    Simonsson, Carl; Andersson, Sofia I; Stenfeldt, Anna-Lena; Bergström, Jörgen; Bauer, Brigitte; Jonsson, Charlotte A; Ericson, Marica B; Broo, Kerstin S

    2011-07-01

    Allergic contact dermatitis (ACD) is the most prevalent form of human immunotoxicity. It is caused by skin exposure to haptens, i.e., protein-reactive, low-molecular-weight chemical compounds, which form hapten-protein complexes (HPCs) in the skin, triggering the immune system. These immunogenic HPCs are elusive. In this study a series of thiol-reactive caged fluorescent haptens, i.e., bromobimanes, were deployed in combination with two-photon fluorescence microscopy, immunohistochemistry, and proteomics to identify possible hapten targets in proteins in human skin. Key targets found were the basal keratinocytes and the keratins K5 and K14. Particularly, cysteine 54 of K5 was found to be haptenated by the bromobimanes. In addition, elevated levels of anti-keratin antibodies were found in the sera of mice exposed to bromobimanes in vivo. The results indicate a general mechanism in which thiol-reactive haptens generate cryptic epitopes normally concealed from the immune system. In addition, keratinocytes and keratin seem to have an important role in the mechanism behind ACD, which is a subject for further investigations.

  11. In-field critical current property of IBAD/PLD coated conductors

    Science.gov (United States)

    Fujita, S.; Daibo, M.; Igarashi, M.; Kikutake, R.; Kakimoto, K.; Iijima, Y.; Itoh, M.; Saitoh, T.

    2014-05-01

    REBa2Cu3Oy, (RE : rare earth elements, RE123) coated conductors are expected to show high performance in superconducting applications, due to their high mechanical strength and high current density in magnetic fields. Fujikura has developed ion-beam-assisted-deposition (IBAD) and pulsed-laser-deposition (PLD) technique, and today we routinely manufacture coated conductors with length over 500 m and Ic over 500 A/cm-width at 77 K, self field. We have also been able to fabricate long conductors with higher Ic by thickening RE123 layer. Although Ic performances at 77 K, self field are important, but performances in magnetic fields at lower temperatures below 77 K are more important for coil applications. In this work, we evaluated coated conductors with thick RE123 layer in magnetic fields at low temperatures. All samples are fabricated with long length. We measured samples by four-probe transport method at wide temperature range from 77 K to 10 K by using cryo-cooled cryostat. A conductor with 5.5 μm thick RE123 exhibits high Ic values of 937 A/cm-width at 77 K, self field, 637 A/cm-width at 50 K, 5T and 976 A/cm-width at 40 K, 5T.

  12. miR-24 affects hair follicle morphogenesis targeting Tcf-3.

    Science.gov (United States)

    Amelio, I; Lena, A M; Bonanno, E; Melino, G; Candi, E

    2013-11-14

    During embryonic development, hair follicles (HFs) develop from an epidermal-mesenchymal cross talk between the ectoderm progenitor layer and the underlying dermis. Epidermal stem cell activation represents a crucial point both for HF morphogenesis and for hair regeneration. miR-24 is an anti-proliferative microRNA (miRNA), which is induced during differentiation of several cellular systems including the epidermis. Here, we show that miR-24 is expressed in the HF and has a role in hair morphogenesis. We generated transgenic mice ectopically expressing miR-24 under the K5 promoter. The K5::miR-24 animals display a marked defect in HF morphogenesis, with thinning of hair coat and altered HF structure. Expression of miR-24 alters the normal process of hair keratinocyte differentiation, leading to altered expression of differentiation markers. MiR-24 directly represses the hair keratinocyte stemness regulator Tcf-3. These results support the notion that microRNAs, and among them miR-24, have an important role in postnatal epidermal homeostasis.

  13. Gender-dependent ATPA-induced changes in long-term potentiation in the rat lateral amygdala.

    Science.gov (United States)

    Schubert, Manja; Drephal, Christian; Albrecht, Doris

    2008-04-01

    There is increasing evidence that kainate receptors contribute to both postsynaptic and presynaptic signaling not only in the hippocampus but also in the amygdala. The present study demonstrates that low concentrations of the specific kainate GLU(K5) receptor agonist, ATPA, depressed baseline activity in the lateral nucleus of the rat amygdala (LA), induced by stimulation of external capsule fibers or by intranuclear stimulation in horizontal brain slices. ATPA reduced high-frequency-induced long-term potentiation (LTP) in males while it enhanced LTP in females during certain phases of the estrus cycle. In untreated slices from females, LA-LTP differed depending on the phase of the estrus cycle. In addition, we show for the first time that the p38 mitogen-activated protein (MAP) kinase inhibitor, SKF 86002, reduced LA-LTP. In males, the effects of ATPA and SKF 86002 were not additive. To the contrary, in females, the exposure to ATPA in control plus SKF 86002 increases LTP relative to control plus SKF 86002 alone. Thus, we demonstrate that the effectiveness of GLU(K5) stimulation on plasticity changes in the amygdala is gender-dependent and that the MAP kinase pathway might be involved in males.

  14. A practical interconnection network RP(k) and its routing algorithms

    Institute of Scientific and Technical Information of China (English)

    刘方爱; 刘志勇; 乔香珍

    2001-01-01

    Based on Petersen graph, a new interconnection network, the RP(k) network, is developed and the properties of the RP(k) network are investigated. The diameter of the RP(k) network is [ k/2] + 2 and its degree is 5. We prove that the diameter of the RP(k) network is much smaller than that of the 2-D Torus network when the number of nodes in interconnection networks is less than or equal to 300. In order to analyze the communication performance in a group of nodes, we propose the concepts of the optimal node groups and the diameter of the optimal node groups. We also show that the diameter of the optimal node groups in the RP(k) network is less than that in the 2-D Torus network. Especially when the number of nodes in an optimal node group is between 6 and 100, the diameter of the optimal node groups in the RP(k) network is half of that in the 2-D Torus network. Furthermore based on the RP(k) network we design a set of routing algorithms which are point-to-point routing, permutation routing, one-to-all routing and all-to-all routing. Their communication efficiencies are [k/2] + 2, k + 5, [k/2] + 2, and k + 5 respectively. The RP(k) network and the routing algorithms can provide efficient communication means for parallel and distributed computer system.

  15. A Review of the Multilevel Slug Test for Characterizing Aquifer Heterogeneity

    Directory of Open Access Journals (Sweden)

    Chia-Shyun Chen

    2012-01-01

    Full Text Available All aquifers are heterogeneous to a certain degree. The spatial distribution of hydraulic conductivity K(x, y, z, or aquifer heterogeneity, significantly influences the groundwater flow movement and associated solute transport. Of particular importance in designing an in-situ remediation plan is a knowledge of low-K layers because they are less accessible to remedial agents and form a bottleneck in remediation. The characterization of aquifer heterogeneity is essential to the solution of many practical and scientific groundwater problems. This article reviews the field technique using the multilevel slug test (MLST, which determines a series of K estimates at depths of interest in a well by making use of a double-packer system. The K(z obtained manifests the vertical variation of hydraulic conductivity in the vicinity of the test well, and the combination of K(z from different wells gives rise to a three-dimensional description of K(x, y, z. The MLST response is rather sensitive to hydraulic conductivity variation; e.g., it is oscillatory for highly permeable conditions (K > 5 × 10-4 m s-1 and a nonoscillatory for K < 5 × 10-4 m s-1. In this article we discuss the instrumentation of the double-packer system, the implementation of the depth-specific slug test, the data analysis methods for a spectrum of response characteristics usually observed in the field, and field applications of the MLST.

  16. Hypergravity Provokes a Temporary Reduction in CD4+CD8+ Thymocyte Number and a Persistent Decrease in Medullary Thymic Epithelial Cell Frequency in Mice.

    Directory of Open Access Journals (Sweden)

    Ryosuke Tateishi

    Full Text Available Gravity change affects many immunological systems. We investigated the effects of hypergravity (2G on murine thymic cells. Exposure of mice to 2G for three days reduced the frequency of CD4+CD8+ thymocytes (DP and mature medullary thymic epithelial cells (mTECs, accompanied by an increment of keratin-5 and keratin-8 double-positive (K5+K8+ TECs that reportedly contain TEC progenitors. Whereas the reduction of DP was recovered by a 14-day exposure to 2G, the reduction of mature mTECs and the increment of K5+K8+ TEC persisted. Interestingly, a surgical lesion of the inner ear's vestibular apparatus inhibited these hypergravity effects. Quantitative PCR analysis revealed that the gene expression of Aire and RANK that are critical for mTEC function and development were up-regulated by the 3-day exposure and subsequently down-regulated by the 14-day exposure to 2G. Unexpectedly, this dynamic change in mTEC gene expression was independent of the vestibular apparatus. Overall, data suggest that 2G causes a temporary reduction of DP and a persistent reduction of mature mTECs in a vestibular system-dependent manner, and also dysregulates mTEC gene expression without involving the vestibular system. These data might provide insight on the impact of gravity change on thymic functions during spaceflight and living.

  17. Colossal Magnetoresistive p-n Junctions of Te-Doped LaMnO3/Nb-doped SrTiO3

    Institute of Scientific and Technical Information of China (English)

    Lü Hui-Bin; YANG Guo-Zhen; DAI Shou-Yu; CHEN Zheng-Hao; LIU Li-feng; GUO Hai-Zhong; XIANG Wen-Feng; FEI Yi-Yan; HE Meng; ZHOU Yue-Liang

    2003-01-01

    We have fabricated colossal magnetoresistive (CMR) p-n junctions made of Te-doped LaMnOs and Nb-doped SrTiOa with laser molecular beam epitaxy. The I - V characteristics of the Lao.aTeo.iMnOs/SrNfao.oiTio.ggOs p-n junctions as a function of applied magnetic field (0-5 T) were experimentally studied in the temperature range 77-300 K. The results indicate that the p-n junction exhibited the CMR behaviour. The magnetoresistance (MR) is positive at 220 K and 300 K, while it displays a negative MR at 77K. For a positive bias, the MR ratios (&.R/RO, Afl = RH - Ro) are 7.5% at 0.1 T and 18% at 5T for 300K, 5% at 0.1 T and 33% at 5T for 220K, -14% at 0.1 T and -71% at 5 T for 77K. For a negative bias, the MR ratios are 6.3% at 0.1 T and 10.8% at 3T for 300K, 5.1% at 0.1 T and 15% at 3T for 220K, -19% at 0.1 T and -72% at 5 T for 77K. The CMR behaviour of the p-n junction is different from those of the LaMnOa compound family.

  18. Development of an e-VLBI Data Transport Software Suite with VDIF

    Science.gov (United States)

    Sekido, Mamoru; Takefuji, Kazuhiro; Kimura, Moritaka; Hobiger, Thomas; Kokado, Kensuke; Nozawa, Kentarou; Kurihara, Shinobu; Shinno, Takuya; Takahashi, Fujinobu

    2010-01-01

    We have developed a software library (KVTP-lib) for VLBI data transmission over the network with the VDIF (VLBI Data Interchange Format), which is the newly proposed standard VLBI data format designed for electronic data transfer over the network. The software package keeps the application layer (VDIF frame) and the transmission layer separate, so that each layer can be developed efficiently. The real-time VLBI data transmission tool sudp-send is an application tool based on the KVTP-lib library. sudp-send captures the VLBI data stream from the VSI-H interface with the K5/VSI PC-board and writes the data to file in standard Linux file format or transmits it to the network using the simple- UDP (SUDP) protocol. Another tool, sudp-recv , receives the data stream from the network and writes the data to file in a specific VLBI format (K5/VSSP, VDIF, or Mark 5B). This software system has been implemented on the Wettzell Tsukuba baseline; evaluation before operational employment is under way.

  19. Extended warm gas in Orion KL as probed by methyl cyanide

    CERN Document Server

    Bell, T A; Viti, S; Marcelino, N; Palau, Aina; Esplugues, G B; Tercero, B

    2014-01-01

    In order to study the temperature distribution of the extended gas within the Orion Kleinmann-Low nebula, we have mapped the emission by methyl cyanide (CH3CN) in its J=6_K-5_K, J=12_K-11_K, J=13_K-12_K, and J=14_K-13_K transitions at an average angular resolution of ~10 arcsec (22 arcsec for the 6_K-5_K lines), as part of a new 2D line survey of this region using the IRAM 30m telescope. These fully sampled maps show extended emission from warm gas to the northeast of IRc2 and the distinct kinematic signatures of the hot core and compact ridge source components. We have constructed population diagrams for the four sets of K-ladder emission lines at each position in the maps and have derived rotational excitation temperatures and total beam-averaged column densities from the fitted slopes. In addition, we have fitted LVG model spectra to the observations to determine best-fit physical parameters at each map position, yielding the distribution of kinetic temperatures across the region. The resulting temperature...

  20. Human histone acetyltransferase 1 (Hat1) acetylates lysine 5 of histone H2A in vivo.

    Science.gov (United States)

    Tafrova, Juliana I; Tafrov, Stefan T

    2014-07-01

    The primary structure of Histone Acetyltransferase 1 (Hat1) has been conserved throughout evolution; however, despite its ubiquity, its cellular function is not well characterized. To study its in vivo acetylation pattern and function, we utilized shRNAmir against Hat1 expressed in the well-substantiated HeLa (human cervical cancer) cell line. To reduce the interference by enzymes with similar HAT specificity, we used HeLa cells expressing histone acetyltransferase Tip60 with mutated acetyl-CoA binding site that abrogates its enzyme activity (mutant HeLa-tip60). Two shRNAmir were identified that reduced the expression of the cytoplasmic and nuclear forms of Hat1. Cytosolic protein preparations from these two clones showed decreased levels of acetylation of lysine 5 (K5) and K12 on histone H4, with the concomitant loss of the acetylation of histone H2A at K5. This pattern of decreased acetylation of H2AK5 was well defined in preparations of histone protein and insoluble nuclear-protein (INP) fractions as well. Abrogating the Hat1 expression caused a 74% decrease in colony-forming efficiency of mutant HeLa-tip60 cells, reduced the size of the colonies by 50%, and decreased the amounts of proteins with molecular weights below 35 kDa in the INP fractions.

  1. EUV spectral line formation and the temperature structure of active region fan loops: observations with Hinode/EIS and SDO/AIA

    CERN Document Server

    Brooks, David H; Young, Peter R

    2011-01-01

    With the aim of studying AR fan loops using Hinode/EIS and SDO/AIA, we investigate a number of inconsistencies in modeling the absolute intensities of Fe VIII and Si VII lines, and address why their images look very similar despite the fact that they have significantly different formation temperatures in ionization equilibrium: log T/K = 5.6 and 5.8. These issues are important to resolve because confidence has been undermined in their use for DEM analysis, and Fe VIII is the main contributor to the AIA 131A channel at low temperatures. Furthermore, they are the best EIS lines to use for velocity studies, and for assigning the correct temperature to velocity measurements in the fans. We find that the Fe VIII 185.213A line is particularly sensitive to the slope of the DEM, leading to disproportionate changes in its effective formation temperature. If the DEM has a steep gradient in the log T/K = 5.6 to 5.8 range, or is strongly peaked, Fe VIII 185.213A and Si VII 275.368A will be formed at the same temperature....

  2. A new perspective in the estimation of postmortem interval (PMI) based on vitreous.

    Science.gov (United States)

    Muñoz, J I; Suárez-Peñaranda, J M; Otero, X L; Rodríguez-Calvo, M S; Costas, E; Miguéns, X; Concheiro, L

    2001-03-01

    The relation between the potassium concentration in the vitreous humor, [K+], and the postmortem interval has been studied by several authors. Many formulae are available and they are based on a correlation test and linear regression using the PMI as the independent variable and [K+] as the dependent variable. The estimation of the confidence interval is based on this formulation. However, in forensic work, it is necessary to use [K+] as the independent variable to estimate the PMI. Although all authors have obtained the PMI by direct use of these formulae, it is, nevertheless, an inexact approach, which leads to false estimations. What is required is to change the variables, obtaining a new equation in which [K+] is considered as the independent variable and the PMI as the dependent. The regression line obtained from our data is [K+] = 5.35 + 0.22 PMI, by changing the variables we get PMI = 2.58[K+] - 9.30. When only nonhospital deaths are considered, the results are considerably improved. In this case, we get [K+] = 5.60 + 0.17 PMI and, consequently, PMI = 3.92[K+] - 19.04.

  3. The X-Ray Crystal Structure of the Keratin 1-Keratin 10 Helix 2B Heterodimer Reveals Molecular Surface Properties and Biochemical Insights into Human Skin Disease.

    Science.gov (United States)

    Bunick, Christopher G; Milstone, Leonard M

    2017-01-01

    Keratins 1 (K1) and 10 (K10) are the primary keratins expressed in differentiated epidermis. Mutations in K1/K10 are associated with human skin diseases. We determined the crystal structure of the complex between the distal (2B) helices of K1 and K10 to better understand how human keratin structure correlates with function. The 3.3 Å resolution structure confirms many features inferred by previous biochemical analyses, but adds unexpected insights. It demonstrates a parallel, coiled-coil heterodimer with a predominantly hydrophobic intermolecular interface; this heterodimer formed a higher order complex with a second K1-K10-2B heterodimer via a Cys401(K10) disulfide link, although the bond angle is unanticipated. The molecular surface analysis of K1-K10-2B identified several pockets, one adjacent to the disulfide linkage and conserved in K5-K14. The solvent accessible surface area of the K1-K10 structure is 20-25% hydrophobic. The 2B region contains mixed acidic and basic patches proximally (N-terminal), whereas it is largely acidic distally (C-terminal). Mapping of conserved and nonconserved residues between K1-K10 and K5-K14 onto the structure demonstrated the majority of unique residues align along the outer helical ridge. Finally, the structure permitted a fresh analysis of the deleterious effects caused by K1/K10 missense mutations found in patients with phenotypic skin disease.

  4. Genetic markers of Restless Legs Syndrome in Parkinson disease.

    Science.gov (United States)

    Gan-Or, Ziv; Alcalay, Roy N; Bar-Shira, Anat; Leblond, Claire S; Postuma, Ronald B; Ben-Shachar, Shay; Waters, Cheryl; Johnson, Amelie; Levy, Oren; Mirelman, Anat; Gana-Weisz, Mali; Dupré, Nicolas; Montplaisir, Jacques; Giladi, Nir; Fahn, Stanley; Xiong, Lan; Dion, Patrick A; Orr-Urtreger, Avi; Rouleau, Guy A

    2015-06-01

    Several studies proposed that Restless Legs Syndrome (RLS) and Parkinson disease (PD) may be clinically and/or etiologically related. To examine this hypothesis, we aimed to determine whether the known RLS genetic markers may be associated with PD risk, as well as with PD subtype. Two case-control cohorts from Tel-Aviv and New-York, including 1133 PD patients and 867 controls were genotyped for four RLS-related SNPs in the genes MEIS1, BTBD9, PTPRD and MAP2K5/SKOR1. The association between genotype, PD risk and phenotype was tested using multivariate regression models. None of the tested SNPs was significantly associated with PD risk, neither in any individual cohort nor in the combined analysis after correction for multiple comparisons. The MAP2K5/SKOR1 marker rs12593813 was associated with higher frequency of tremor in the Tel-Aviv cohort (61.0% vs. 46.5%, p = 0.001, dominant model). However, the risk allele for tremor in this gene has been associated with reduced RLS risk. Moreover, this association did not replicate in Tremor-dominant PD patients from New-York. RLS genetic risk markers are not associated with increased PD risk or subtype in the current study. Together with previous genetic, neuropathological and epidemiologic studies, our results further strengthen the notion that RLS and PD are likely to be distinct entities. Copyright © 2015 Elsevier Ltd. All rights reserved.

  5. Characterization of five fungal endophytes producing Cajaninstilbene acid isolated from pigeon pea [Cajanus cajan (L. Millsp].

    Directory of Open Access Journals (Sweden)

    Yuan Gao

    Full Text Available Five fungal endophytes (K4, K5, K6, K9, K14 producing Cajaninstilbene acid (CSA, 3-hydroxy-4-prenyl-5-methoxystilbene-2-carboxylic acid were isolated from the roots of pigeon pea [Cajanus cajan (L. Millsp.]. CSA is responsible for the prominent pharmacological activities in pigeon pea. The amount of CSA in culture solution varied among the five fungal endophytes. K4 produced the highest levels of CSA (1037.13 µg/L among the endophytes tested after incubation for five days. Both morphological characteristics and molecular methods were used for species identification of fungal endophytes. The five endophytic isolates were characterized by analyzing the internal transcribed spacer (ITS rRNA and β-tubulin genes. The K4, K5, K9 and K14 strains isolated from pigeon pea roots were found to be closely related to the species Fusarium oxysporum. K6 was identified as Neonectria macrodidym. The present study is the first report on the isolation and identification of fungal endophytes producing CSA in pigeon pea. The study also provides a scientific base for large scale production of CSA.

  6. An After School Education Program on the Tohono O'odham Nation

    Science.gov (United States)

    Sparks, R. T.; Garmany, K.; Siquieros, J. M.; Austin, C. L.; Pompea, S. M.; Walker, C. E.

    2013-04-01

    The Education and Public Outreach Group (EPO) group of the National Optical Astronomy Observatory has started a partnership with Indian Oasis Baboquivari Unified School District (IOBUSD) on the Tohono O'odham Nation to participate in after school science education programs. IOBUSD has started an after school program for K-5 students as part of their state mandated school improvement program. The first semester has approximately 50 students in K-5 participating in the after school program from Monday through Thursday. Several organizations are working with IOBUSD to provide after school educational programs focusing on a variety of topics including study skills, art, nutrition, bullying, study skills and science. NOAO has been working primarily with the fourth and fifth grade students during the spring of 2012 once a week providing science programs in optics, dark skies and astronomy. We are currently planning to continue this partnership in the fall of 2012 when the school district is planning to invite more students to join the program. We will discuss many the challenges of working with a school district in a remote location as well as the activities we have been using with the students. We will also outline plans for future directions in the program.

  7. Briquettes of rice husk, polyethylene terephthalate (PET), and dried leaves as implementation of wastes recycling

    Science.gov (United States)

    Hariyanto, Sucipto; Usman, Mohammad Nurdianfajar; Citrasari, Nita

    2017-06-01

    This research aim is to determine the best briquettes as implementation of wastes recycle based on scoring method, main component composition, compressive strength, caloric value, water content, vollatile content, and ash content, also the suitability with SNI 01-6235-2000. Main component that used are rice husk, 2mm and 6 mm PET, and dried leaves. Composition variation in this research are marked as K1, K2, K3, K4, and K5 with 2 mm PET plastic and K1, K2, K3, K4, and K5 with 6 mm PET plastic. The total weight of the briquettes is 100 g and divided into 90% main components and 10% tapioca as binder. The compressive strength, caloric value, water content, vollatile content, and ash content were tested according to ASTM D 5865-04, ASTM D 3173-03, ASTM D 3175-02, ASTM D 3174-02. The tested results were used to determine the best briquette by scoring method, and the chosen briquettes is K2 with 6 mm PET plastic. The composition is 70% rice husk, 20% 6 mm PET plastic, and 10% dried leaves with the compressive strength, caloric value, water content, vollatile content, and ash content value is 51,55 kg/cm2; 5123 kal/g; 3,049%; 31,823%, dan 12,869%. The suitable value that meet the criteria according to SNI 01-6235-2000 is compressive strength, caloric value, water content, and ash content.

  8. Measurements of branching fractions, polarizations, and direct CP-violation asymmetries in B --> rho K* and B --> f0(980) K* decays

    CERN Document Server

    Aubert, B; Bóna, M; Boutigny, D; Couderc, F; Karyotakis, Yu; Lees, J P; Poireau, V; Tisserand, V; Zghiche, A; Graugès-Pous, E; Palano, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Battaglia, M; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Gill, M S; Groysman, Y; Jacobsen, R G; Kadyk, J A; Kerth, L T; Kolomensky, Y G; Kukartsev, G; Lynch, G; Mir, L M; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, M T; Wenzel, W A; Del Amo-Sánchez, P; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schröder, T; Steinke, M; Boyd, J T; Burke, J P; Cottingham, W N; Walker, D; Çuhadar-Dönszelmann, T; Fulsom, B G; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Khan, A; Kyberd, P; Saleem, M; Sherwood, D J; Teodorescu, L; Blinov, V E; Bukin, A D; Druzhinin, V P; Golubev, V B; Onuchin, A P; Serednyakov, S I; Skovpen, Y I; Solodov, E P; Todyshev, K Y; Best, D S; Bondioli, M; Bruinsma, M; Chao, M; Curry, S; Eschrich, I; Kirkby, D; Lankford, A J; Lund, P; Mandelkern, M A; Mommsen, R K; Röthel, W; Stoker, D P; Abachi, S; Buchanan, C; Foulkes, S D; Gary, J W; Long, O; Shen, B C; Wang, K; Zhang, L; Hadavand, H K; Hill, E J; Paar, H P; Rahatlou, S; Sharma, V; Berryhill, J W; Campagnari, C; Cunha, A; Dahmes, B; Hong, T M; Kovalskyi, D; Richman, J D; Beck, T W; Eisner, A M; Flacco, C J; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dvoretskii, A; Fang, F; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Mancinelli, G; Meadows, B T; Mishra, K; Sokoloff, M D; Blanc, F; Bloom, P C; Chen, S; Ford, W T; Hirschauer, J F; Kreisel, A; Nagel, M; Nauenberg, U; Olivas, A; Ruddick, W O; Smith, J G; Ulmer, K A; Wagner, S R; Zhang, J; Chen, A; Eckhart, E A; Soffer, A; Toki, W H; Wilson, R J; Winklmeier, F; Zeng, Q; Altenburg, D D; Feltresi, E; Hauke, A; Jasper, H; Petzold, A; Spaan, B; Brandt, T; Klose, V; Lacker, H M; Mader, W F; Nogowski, R; Schubert, J; Schubert, K R; Schwierz, R; Sundermann, J E; Volk, A; Bernard, D; Bonneaud, G R; Grenier, P; Latour, E; Thiebaux, C; Verderi, M; Clark, P J; Gradl, W; Muheim, F; Playfer, S; Robertson, A I; Xie, Y; Andreotti, M; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Petrella, A; Piemontese, L; Prencipe, E; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; De Sangro, R; Finocchiaro, G; Pacetti, S; Patteri, P; Peruzzi, I M; Piccolo, M; Rama, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Lo Vetere, M; Macri, M M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Wu, J; Dubitzky, R S; Marks, J; Schenk, S; Uwer, U; Bard, D J; Bhimji, W; Bowerman, D A; Dauncey, P D; Egede, U; Flack, R L; Nash, J A; Nikolich, M B; Panduro-Vazquez, W; Behera, P K; Chai, X; Charles, M J; Mallik, U; Meyer, N T; Ziegler, V; Cochran, J; Crawley, H B; Dong, L; Eyges, V; Meyer, W T; Prell, S; Rosenberg, E I; Rubin, A E; Gritsan, A V; Denig, A G; Fritsch, M; Schott, G; Arnaud, N; Davier, M; Grosdidier, G; Höcker, A; Le Diberder, F R; Lepeltier, V; Lutz, A M; Oyanguren, A; Pruvot, S; Rodier, S; Roudeau, P; Schune, M H; Stocchi, A; Wang, W F; Wormser, G; Cheng, C H; Lange, D J; Wright, D M; Chavez, C A; Forster, I J; Fry, J R; Gabathuler, E; Gamet, R; George, K A; Hutchcroft, D E; Payne, D J; Schofield, K C; Touramanis, C; Bevan, A J; Di Lodovico, F; Menges, W; Sacco, R; Cowan, G; Flächer, H U; Hopkins, D A; Jackson, P S; McMahon, T R; Ricciardi, S; Salvatore, F; Wren, A C; Davis, C L; Allison, J; Barlow, N R; Barlow, R J; Chia, Y M; Edgar, C L; Lafferty, G D; Naisbit, M T; Williams, J C; Yi, J I; Chen, C; Hulsbergen, W D; Jawahery, A; Lae, C K; Roberts, D A; Simi, G; Blaylock, G; Dallapiccola, C; Hertzbach, S S; Li, X; Moore, T B; Saremi, S; Stängle, H; Cowan, R; Sciolla, G; Sekula, S J; Spitznagel, M; Taylor, F; Yamamoto, R K; Kim, H; Mclachlin, S E; Patel, P M; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L; Eschenburg, V; Godang, R; Kroeger, R; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Simard, M; Taras, P; Viaud, F B; Nicholson, H; Cavallo, N; De Nardo, Gallieno; Fabozzi, F; Gatto, C; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Raven, G; Snoek, H L; Jessop, C P; LoSecco, J M; Allmendinger, T; Benelli, G; Gan, K K; Honscheid, K; Hufnagel, D; Jackson, P D; Kagan, H; Kass, R; Rahimi, A M; Ter-Antonian, R; Wong, Q K; Blount, N L; Brau, J E; Frey, R; Igonkina, O; Lu, M; Rahmat, R; Sinev, N B; Strom, D; Strube, J; Torrence, E; Gaz, A; Margoni, M; Morandin, M; Pompili, A; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Voci, C; Benayoun, M; Chauveau, J; Briand, H; David, P; Del Buono, L; La Vaissière, C de; Hamon, O; Hartfiel, B L; John, M J J; Leruste, P; Malcles, J; Ocariz, J; Roos, L; Therin, G; Gladney, L; Panetta, J; Biasini, M; Covarelli, R; Angelini, C; Batignani, G; Bettarini, S; Bucci, F; Calderini, G; Carpinelli, M; Cenci, R; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Mazur, M A; Morganti, M; Neri, N; Paoloni, E; Rizzo, G; Walsh, J J; Haire, M; Judd, D; Wagoner, D E; Biesiada, J; Danielson, N; Elmer, P; Lau, Y P; Lü, C; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; D'Orazio, A; Del Re, D; Di Marco, E; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Piredda, G; Polci, F; Safai-Tehrani, F; Voena, C; Ebert, M; Schröder, H; Waldi, R; Adye, T; De Groot, N; Franek, B; Olaiya, E O; Wilson, F F; Aleksan, R; Emery, S; Escalier, M; Gaidot, A; Ganzhur, S F; Hamel de Monchenault, G; Kozanecki, Witold; Legendre, M; Vasseur, G; Yéche, C; Zito, M; Chen, X R; Liu, H; Park, W; Purohit, M V; Wilson, J R; Allen, M T; Aston, D; Bartoldus, R; Bechtle, P; Berger, N; Claus, R; Coleman, J P; Convery, M R; Cristinziani, M; Dingfelder, J C; Dorfan, J; Dubois-Felsmann, G P; Dujmic, D; Dunwoodie, W M; Field, R C; Glanzman, T; Gowdy, S J; Graham, M T; Halyo, V; Hast, C; Hrynóva, T; Innes, W R; Kelsey, M H; Kim, P; Leith, D W G S; Li, S; Luitz, S; Lüth, V; Lynch, H L; MacFarlane, D B; Marsiske, H; Messner, R; Müller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Pulliam, T; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Snyder, A; Stelzer, J; Su, D; Sullivan, M K; Suzuki, K; Swain, S K; Thompson, J M; Vavra, J; Van Bakel, N; Weaver, M; Weinstein, A J R; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Yi, K; Young, C C; Burchat, P R; Edwards, A J; Majewski, S A; Petersen, B A; Roat, C; Wilden, L; Ahmed, S; Alam, M S; Bula, R; Ernst, J A; Jain, V; Pan, B; Saeed, M A; Wappler, F R; Zain, S B; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Ritchie, J L; Satpathy, A; Schilling, C J; Schwitters, R F; Izen, J M; Lou, X C; Ye, S; Bianchi, F; Gallo, F; Gamba, D; Bomben, M; Bosisio, L; Cartaro, C; Cossutti, F; Della Ricca, G; Dittongo, S; Lanceri, L; Vitale, L; Azzolini, V; Martínez-Vidal, F; Banerjee, S; Bhuyan, B; Brown, C M; Fortin, D; Hamano, K; Kowalewski, R V; Nugent, I M; Roney, J M; Sobie, R J; Back, J J; Harrison, P F; Latham, T E; Mohanty, G B; Pappagallo, M; Band, H R; Chen, X; Cheng, B; Dasu, S; Datta, M; Flood, K T; Hollar, J J; Kutter, P E; Mellado, B; Mihályi, A; Pan, Y; Pierini, M; Prepost, R; Wu, S L; Yu, Z; Neal, H

    2006-01-01

    We report searches for B-meson decays to the charmless final states rho K* and f0(980) K* with a sample of 232 million BBbar pairs collected with the BABAR detector at the PEP-II asymmetric-energy e+e- collider at SLAC. We measure the following branching fractions in units of 10^{-6}: B (B+ --> rho0 K*+) = 3.6 +/- 1.7 +/- 0.8 ( rho+ K*0) = 9.6 +/- 1.7 +/- 1.5, B (B0 --> rho- K*+) = 5.4 +/- 3.6 +/- 1.6 ( rho0 K*0) = 5.6 +/- 0.9 +/- 1.3, B (B+ --> f0(980) K*+) = 5.2 +/- 1.2 +/- 0.5, and B (B0 --> f0(980) K*0) = 2.6 +/- 0.6 +/- 0.9 ( rho+ K*0) = 0.52 +/- 0.10 +/- 0.04, f_L (B0 --> rho0 K*0) = 0.57 +/- 0.09 +/- 0.08, A_CP (B+ --> rho+ K*0) = -0.01 +/- 0.16 +/- 0.02, A_CP (B0 --> rho0 K*0) = 0.09 +/- 0.19 +/- 0.02, A_CP (B+ --> f_0(980) K*+) = -0.34 +/- 0.21 +/- 0.03, and A_CP (B0 --> f_0(980) K*0) = -0.17 +/- 0.28 +/- 0.02.

  9. Characterization of five fungal endophytes producing Cajaninstilbene acid isolated from pigeon pea [Cajanus cajan (L.) Millsp].

    Science.gov (United States)

    Gao, Yuan; Zhao, Jin Tong; Zu, Yuan Gang; Fu, Yu Jie; Wang, Wei; Luo, Meng; Efferth, Thomas

    2011-01-01

    Five fungal endophytes (K4, K5, K6, K9, K14) producing Cajaninstilbene acid (CSA, 3-hydroxy-4-prenyl-5-methoxystilbene-2-carboxylic acid) were isolated from the roots of pigeon pea [Cajanus cajan (L.) Millsp.]. CSA is responsible for the prominent pharmacological activities in pigeon pea. The amount of CSA in culture solution varied among the five fungal endophytes. K4 produced the highest levels of CSA (1037.13 µg/L) among the endophytes tested after incubation for five days. Both morphological characteristics and molecular methods were used for species identification of fungal endophytes. The five endophytic isolates were characterized by analyzing the internal transcribed spacer (ITS) rRNA and β-tubulin genes. The K4, K5, K9 and K14 strains isolated from pigeon pea roots were found to be closely related to the species Fusarium oxysporum. K6 was identified as Neonectria macrodidym. The present study is the first report on the isolation and identification of fungal endophytes producing CSA in pigeon pea. The study also provides a scientific base for large scale production of CSA.

  10. $k$-noncrossing RNA structures with arc-length $\\ge 3$

    CERN Document Server

    Jin, Emma Y

    2007-01-01

    In this paper we enumerate $k$-noncrossing RNA pseudoknot structures with given minimum arc- and stack-length. That is, we study the numbers of RNA pseudoknot structures with arc-length $\\ge 3$, stack-length $\\ge \\sigma$ and in which there are at most $k-1$ mutually crossing bonds, denoted by ${\\sf T}_{k,\\sigma}^{[3]}(n)$. In particular we prove that the numbers of 3, 4 and 5-noncrossing RNA structures with arc-length $\\ge 3$ and stack-length $\\ge 2$ satisfy ${\\sf T}_{3,2}^{[3]}(n)^{}\\sim K_3 n^{-5} 2.5723^n$, ${\\sf T}^{[3]}_{4,2}(n)\\sim K_4 n^{-{21/2}} 3.0306^n$, and ${\\sf T}^{[3]}_{5,2}(n)\\sim K_5 n^{-18} 3.4092^n$, respectively, where $K_3,K_4,K_5$ are constants. Our results are of importance for prediction algorithms for RNA pseudoknot structures.

  11. EROs found behind lensing clusters: II.Empirical properties, classification, and SED modelling based on multi-wavelength observations

    CERN Document Server

    Hempel, A; Egami, E; Pelló, R; Wise, M; Richard, J; Le Borgne, J F; Kneib, J -P

    2007-01-01

    We study the properties and nature of extremely red galaxies (ERO, R-K>5.6) found behind two lensing clusters and compare them with other known galaxy populations. New HST/ACS observations, Spitzer IRAC and MIPS, and Chandra/ACIS observations of the two lensing clusters Abell 1835 and AC114 contemplate our earlier optical and near-IR observations and have been used to study extremely red objects (EROs) in these deep fields. We have found 6 and 9 EROs in Abell 1835 and AC114. Several (7) of these objects are undetected up to the I and/or z band, and are hence ``optical'' drop-out sources. The photometric redshifts of most of our sources (80%) are z~0.7-1.5. According to simple colour-colour diagrams the majority of our objects would be classified as hosting old stellar populations. However, there are clear signs of dusty starbursts for several among them. These objects correspond to the most extreme ones in R-K colour. We estimate a surface density of (0.97+-0.31) arcmin-2 for EROs with (R-K>5.6) at K3) is fou...

  12. Hydrothermal synthesis and study of an inorganic-organic hybrid vanadate of a nickel(II) coordination complex with pyrazine, Ni{sub 3}(C{sub 4}H{sub 4}N{sub 2}){sub 3}(V{sub 8}O{sub 23})

    Energy Technology Data Exchange (ETDEWEB)

    Larrea, Edurne S. [Dpto. de Mineralogia y Petrologia, Facultad de Ciencia y Tecnologia, Universidad del Pais Vasco/Euskal Herriko Unibertsitatea, UPV/EHU, Apdo. 644, E-48080 Bilbao (Spain); Mesa, Jose L., E-mail: joseluis.mesa@ehu.es [Dpto. de Quimica Inorganica, Facultad de Ciencia y Tecnologia, Universidad del Pais Vasco/Euskal Herriko Unibertsitatea, UPV/EHU, Apdo. 644, E-48080 Bilbao (Spain); Arriortua, Maria I. [Dpto. de Mineralogia y Petrologia, Facultad de Ciencia y Tecnologia, Universidad del Pais Vasco/Euskal Herriko Unibertsitatea, UPV/EHU, Apdo. 644, E-48080 Bilbao (Spain)

    2011-06-15

    Highlights: {yields} A novel inorganic-organic hybrid vanadate of nickel(II) coordination complex with pyrazine has been synthesized hydrothermally. {yields} The thermal and spectroscopic behavior has been studied. {yields} The compound shows AFM interactions which has been fitted to a magnetic model of lineal chains. -- Abstract: The three-dimensional hybrid compound Ni{sub 3}(C{sub 4}H{sub 4}N{sub 2}){sub 3}(V{sub 8}O{sub 23}) has been synthesized by mild hydrothermal methods under autogenous pressure at 170 {sup o}C. The structure of the phase is stable until 380 {sup o}C. The removal of the pyrazine molecules from the structure induces its collapse. The IR spectrum shows the vibration modes of the pyrazine molecule and those of the [VO{sub 4}]{sup 3-} groups. A UV-visible spectrum shows the characteristic bands of the Ni(II) d{sup 8}-high-spin cation in a slightly distorted octahedral coordination. Magnetic measurements indicate the existence of antiferromagnetic interactions that can be fitted with a chain model to give g = 2.31, J/k = -5.3, and zJ'/k = -5.5.

  13. Clinical Research of Synthetic Antibacterial Peptide in Antibacterial Properties of Oral Bacteria%人工合成抗菌肽对口腔细菌抗菌性能的临床研究

    Institute of Scientific and Technical Information of China (English)

    刘晓丹

    2016-01-01

    目的:探讨人工合成抗菌肽对口腔细菌的抗菌性能。方法选取9种人工合成抗菌肽(Brevinin、chensinin-1、chensinin-1b、L-K5V1、L-K6、L-K6V1、L-K6V2、Temporin-1CEa、Temporin-1CEb)和6种口腔细菌(白色念珠菌、具核梭杆菌、嗜酸乳杆菌、变异链球菌、唾液链球菌、血液链球菌)做体外实验,分析人工合成抗菌肽对口腔细菌的抗菌性能。结果 chensinin-1b、L-K5V1、L-K6、L-K6V1、L-K6V2、Temporin-1CEa对白色念珠菌具有高抑菌率;Brevinin、chensinin-1b、L-K5V1、L-K6、L-K6V1、L-K6V2、Temporin-1CEa、Temporin-1CEb对具核梭杆菌、变异链球菌、唾液链球菌、血液链球菌具有高抑菌率;Brevinin、chensinin-1、chensinin-1b、L-K5V1、L-K6、L-K6V1、L-K6V2、Temporin-1CEa、Temporin-1CEb 对嗜酸乳杆菌具有高抑菌率;Brevinin 最小抑菌浓度:血液链球菌>具核梭杆菌>唾液链球菌>变异链球菌>嗜酸乳杆菌;chensinin-1最小抑菌浓度:嗜酸乳杆菌;chensinin-1b 最小抑菌浓度:嗜酸乳杆菌>唾液链球菌>血液链球菌>具核梭杆菌>白色念珠菌>变异链球菌;L-K5V1最小抑菌浓度:嗜酸乳杆菌>具核梭杆菌>变异链球菌>白色念珠菌>唾液链球菌>血液链球菌;L-K6最小抑菌浓度:唾液链球菌>血液链球菌>白色念珠菌>变异链球菌>具核梭杆菌>嗜酸乳杆菌;L-K6V1最小抑菌浓度:嗜酸乳杆菌>血液链球菌>唾液链球菌>白色念珠菌>具核梭杆菌>变异链球菌;L-K6V2最小抑菌浓度:白色念珠菌>变异链球菌>唾液链球菌>嗜酸乳杆菌>具核梭杆菌>血液链球菌;Temporin-1CEa最小抑菌浓度:白色念珠菌>具核梭杆菌>唾液链球菌>嗜酸乳杆菌>变异链球菌>血液链球菌;Temporin-1CEb最小抑菌浓度:唾液链球菌>具核梭杆菌>变异链球菌>血液链球菌>嗜酸乳杆菌。结论不同人工合成

  14. PCR-DGGE Analysis of the Effect of Natural Composite Preservative on Dynamic Changes of Microorganisms in Cutlassfish (Trichiurus haumela) during Cold Storage%PCR-DGGE指纹技术研究复合保鲜剂对冷藏带鱼贮藏期间微生物变化的影响

    Institute of Scientific and Technical Information of China (English)

    蓝蔚青; 谢晶

    2012-01-01

    results of DGGE fingerprinting indicated that cutlass fish possessed abundant microbial communities during the early part of the storage period (16 d). However, with increasing storage time, only few bacterial species kept alive and became dominant at last. The main brands in the DGGE patterns of cutiassfish were sequenced to identify 12 bacterial species. The specific spoilage organisms (SOSs) of control and NCP-treatment samples of cutlassfish in the final stages of spoilage showed high similarity. Psychrobacter sp. was dominant in the early stages, whereas the proportions of Shewanella sp. and Pseudomonas sp. increased gradually with the extension of storage time, and became dominant. Moreover, both Pseudomonas fluorescens and Vibrio sp. were highly proportional. In addition, NCP treatment had no obvious inhibitory effect on Shewanella sp. or Pseudomonas sp.

  15. Diversity of epiphytic bacteria of three species of Gracilaria and their bacteriostatic activities%三种江蓠共附生细菌多样性及抑菌活性分析

    Institute of Scientific and Technical Information of China (English)

    覃媚; 于清武; 竺利波; 李菲; 颜栋美; 余炼; 高程海

    2016-01-01

    Objective]The present study was conducted to explore the diversity of culturable epiphytic bacteria of three species of Gracilaria and bacteriostatic activities of their metabolits in sea area around Weizhoudao Island, Beibu Gulf, Guangxi, in order to provide reference for development of these epiphytic bacteria in the sea area and new biological fungicides. [Method]Dilution coating method was applied to observe colonial morphology and distribution of epiphytic bac-teria of three species of Gracilaria. Diversity of the epiphytic bacteria of Gracilaria was analyzed based on 16S rRNA se-quence and their bacteriostatic activities were screened by disc diffusion method. [Result]Twenty-eight strains were ex-tracted from Gracilaria verrucosa, Gracilaria textorii and Gracilaria glomerata in Beibu Gulf, Guangxi belonged to four subclasses, thirteen families and fifteen genuses(Bacillus sp.; Staphylococcus sp.; Vibrio sp.; Psychrobacter sp.; Al-teromonas sp.;Pseudoalteromonas sp.; Erythrobacter sp.; Paracoccus sp.; Kocuria sp.; Micrococcus sp.; Rhodopirellula sp.; Kytococcus sp.; Dermacoccus sp.; Maribacter sp.; Cobetia sp.). The metabolites of five strains showed obvious an-tagonistic effects against Colletrichum gloeosporiode M2 or C. gloeosporiodes Lz2. Metabolites of strains GXS0044, GXS0017 and GXS0035 showed sound inhibition effects towards C. gloeosporiodes Lz2(antibacterial circle diameters were 15.0, 14.5 and 15.5 mm, respectively). Metabolites of strains GXS0023 and GXS0031 showed obvious inhibition effects towards C. gloeosporiode M2(antibacterial circle diameters were 15.0 and 17.0 mm, respectively). [Conclusion]There are resource-ful epiphytic bacteria of Gracilaria and their metabolites activities are different. Therefore, searching for pathogens that are resistant to agricultural diseases from seaweeds will become a new direction in development of new pathogen fungicides that against agricultural diseases.%【目的】研究广西北部湾涠洲岛海域3种

  16. Repair of tracheal epithelium by basal cells after chlorine-induced injury

    Directory of Open Access Journals (Sweden)

    Musah Sadiatu

    2012-11-01

    Full Text Available Abstract Background Chlorine is a widely used toxic compound that is considered a chemical threat agent. Chlorine inhalation injures airway epithelial cells, leading to pulmonary abnormalities. Efficient repair of injured epithelium is necessary to restore normal lung structure and function. The objective of the current study was to characterize repair of the tracheal epithelium after acute chlorine injury. Methods C57BL/6 mice were exposed to chlorine and injected with 5-ethynyl-2′-deoxyuridine (EdU to label proliferating cells prior to sacrifice and collection of tracheas on days 2, 4, 7, and 10 after exposure. Airway repair and restoration of a differentiated epithelium were examined by co-localization of EdU labeling with markers for the three major tracheal epithelial cell types [keratin 5 (K5 and keratin 14 (K14 for basal cells, Clara cell secretory protein (CCSP for Clara cells, and acetylated tubulin (AcTub for ciliated cells]. Morphometric analysis was used to measure proliferation and restoration of a pseudostratified epithelium. Results Epithelial repair was fastest and most extensive in proximal trachea compared with middle and distal trachea. In unexposed mice, cell proliferation was minimal, all basal cells expressed K5, and K14-expressing basal cells were absent from most sections. Chlorine exposure resulted in the sloughing of Clara and ciliated cells from the tracheal epithelium. Two to four days after chlorine exposure, cell proliferation occurred in K5- and K14-expressing basal cells, and the number of K14 cells was dramatically increased. In the period of peak cell proliferation, few if any ciliated or Clara cells were detected in repairing trachea. Expression of ciliated and Clara cell markers was detected at later times (days 7–10, but cell proliferation was not detected in areas in which these differentiated markers were re-expressed. Fibrotic lesions were observed at days 7–10 primarily in distal trachea. Conclusion

  17. Razvoj i validacija Upitnika znanja i rizičnog ponašanja korisnika informacijskog sustava (UZPK

    Directory of Open Access Journals (Sweden)

    Tena Velki

    2015-12-01

    Full Text Available Dosadašnja su istraživanja pokazala kako je čovjek najslabija karika u sigurnosnom sustavu te kako ne postoji pouzdan način mjerenja rizičnosti čovjekova ponašanja u vidu narušavanja sigurnosti informacijskog sustava. Cilj je istraživanja bio razviti valjan i pouzdan instrument koji će mjeriti utjecaj korisnika na sigurnost informacijskog sustava. U tu je svrhu kreiran Upitnik znanja i rizičnog ponašanja korisnika informacijskog sustava (UZPK; Velki i Šolić, 2014; prema Velki, Šolić i Očević, 2014. Istraživanje je provedeno u tri vala prikupljanja podataka. Prvi se uzorak sastojao od 135 studenata druge godine preddiplomskog studija na kojem je provjerena konstruktna valjanost, pouzdanost i osjetljivost pojedinih subskala te odabrane odgovarajuće čestice. Drugi se uzorak sastojao od 211 studenata i zaposlenika, a na njemu su provjerene metrijske karakteristike poboljšanog instrumenta te je dobivena konačna verzija UZPK (k=33, koja se dijeli na dvije skale: Skala rizičnog ponašanja računalnih korisnika (k=17 [sastoji se od tri supskale: Supskala uobičajenih rizičnih ponašanja korisnika računala (k=6, Supskala održavanja osobnih računalnih sustava (k=6 i Supskala posuđivanja pristupnih podataka (k=5] te Skala znanja o informacijskoj sigurnosti (k=16 (također se sastoji od tri supskale: Supskala stupnja sigurnosti računalne komunikacije (k=5, Supskala uvjerenja o sigurnosti računalnih podataka (k=5 i Supskala važnosti pravilne pohrane računalnih podataka (k=6. Treći se uzorak sastajao od 152 zaposlenika i na njemu je validiran UZPK. Dobivena je dobra konstruktna valjanost, sve skale i supskale imaju zadovoljavajuće metrijske karakteristike (pouzdanost i osjetljivost te je dobivena i dobra kriterijska valjanost. Može se zaključiti kako Upitnik predstavlja valjan i pouzdan mjerni instrument, zadovoljavajućih psihometrijskih karakteristika.

  18. HST Studies of the Chromospheres, Wind, and Mass-Loss Rates of Cool Giant and Supergiant Stars

    Science.gov (United States)

    Carpenter, Kenneth G.

    2000-01-01

    UV spectra of K-M giant and supergiant stars and of carbon stars have been acquired with the Goddard High Resolution Spectrograph (GHRS) on the Hubble Space Telescope (HST). These spectra have been used to measure chromospheric flow and turbulent velocities, study the acceleration of their stellar winds, acquire constraints on their outer atmospheric structure, and enable estimates of their mass-loss rates. Results from our observations of the giant stars Gamma Dra (K5 III hybrid), Alpha Tau (K5 III), Gamma Cru (M3.4 III), Mu Gem (M3 IIIab), and 30 Her (MG III), the supergiants Alpha Ori (M2 Iab) and Lambda Vel (K5 Ib), and the carbon stars TX Psc (NO; C6,2) and TW Hor (NO; C7,2) will be summarized and compared. The high resolution and wavelength accuracy of these data have allowed the direct measurement of the acceleration of the stellar winds in the chromospheres of several of these stars (from initial velocities of 3-9 km/s to upper velocities of 15-25 km/s) and of the chromospheric macroturbulence (-25-35 km/s). The high signal-to-noise and large dynamic range of these spectra have allowed the detection and identification of numerous new emission features, including weak C IV emission indicative of hot transition-region plasma in the non-coronal giant Alpha Tau, many new fluorescent lines of Fe II, and the first detection of fluorescent molecular hydrogen emission and of Ca II recombination lines in the UV spectrum of a giant star. The UV spectrum of two carbon stars have been studied with unprecedented resolution and reveal extraordinarily complicated Mg II lines nearly smothered by circumstellar absorptions. Finally, comparison of synthetic UV emission line profiles computed with the Lamers et al. (1987) Sobolev with Exact Integration (SEI) code with observations of chromospheric emission lines overlain with wind absorption features provides estimates of the mass-loss rates for four of these stars.

  19. AMPA, NMDA and kainate glutamate receptor subunits are expressed in human peripheral blood mononuclear cells (PBMCs) where the expression of GluK4 is altered by pregnancy and GluN2D by depression in pregnant women.

    Science.gov (United States)

    Bhandage, Amol K; Jin, Zhe; Hellgren, Charlotte; Korol, Sergiy V; Nowak, Krzysztof; Williamsson, Louise; Sundström-Poromaa, Inger; Birnir, Bryndis

    2017-04-15

    The amino acid glutamate opens cation permeable ion channels, the iGlu receptors. These ion channels are abundantly expressed in the mammalian brain where glutamate is the main excitatory neurotransmitter. The neurotransmitters and their receptors are being increasingly detected in the cells of immune system. Here we examined the expression of the 18 known subunits of the iGlu receptors families; α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA), kainate, N-methyl-d-aspartate (NMDA) and delta in human peripheral blood mononuclear cells (PBMCs). We compared the expression of the subunits between four groups: men, non-pregnant women, healthy pregnant women and depressed pregnant women. Out of 18 subunits of the iGlu receptors, mRNAs for 11 subunits were detected in PBMCs from men and non-pregnant women; AMPA: GluA3, GluA4, kainate: GluK2, GluK4, GluK5, NMDA: GluN1, GluN2C, GluN2D, GluN3A, GluN3B, and delta: GluD1. In the healthy and the depressed pregnant women, in addition, the delta GluD2 subunit was identified. The mRNAs for GluK4, GluK5, GluN2C and GluN2D were expressed at a higher level than other subunits. Gender, pregnancy or depression during pregnancy altered the expression of GluA3, GluK4, GluN2D, GluN3B and GluD1 iGlu subunit mRNAs. The greatest changes recorded were the lower GluA3 and GluK4 mRNA levels in pregnant women and the higher GluN2D mRNA level in healthy but not in depressed pregnant women as compared to non-pregnant individuals. Using subunit specific antibodies, the GluK4, GluK5, GluN1, GluN2C and GluN2D subunit proteins were identified in the PBMCs. The results show expression of specific iGlu receptor subunit in the PBMCs and support the idea of physiology-driven changes of iGlu receptors subtypes in the immune cells. Copyright © 2017 Elsevier B.V. All rights reserved.

  20. 课程论坛知识分享工具的教学模式研究

    Institute of Scientific and Technical Information of China (English)

    邓向林

    2016-01-01

    在高等教育中,越来越多的教师利用网络上的讨论平台来延伸课堂中的讨论.本研究的主要目的在于探讨课程论坛中,学生讨论内容的知识建构层次和行为模式.研究的结果显示,有教师适时地介入学生的讨论,适时地给予学生讨论方向,或引导学生进入更深、更广的讨论,可以促进学生较高知识建构层次(K3、K5)的讨论,可有效地提高学生的学习成效.

  1. Molecular-dynamics simulation of a ceramide bilayer

    Science.gov (United States)

    Pandit, Sagar A.; Scott, H. Larry

    2006-01-01

    Ceramide is the simplest lipid in the biologically important class of glycosphingolipids. Ceramide is an important signaling molecule and a major component of the strateum corneum layer in the skin. In order to begin to understand the biophysical properties of ceramide, we have carried out a molecular-dynamics simulation of a hydrated 16:0 ceramide lipid bilayer at 368K (5° above the main phase transition). In this paper we describe the simulation and present the resulting properties of the bilayer. We compare the properties of the simulated ceramide bilayer to an earlier simulation of 18:0 sphingomyelin, and we discuss the results as they relate to experimental data for ceramide and other sphingolipids. The most significant differences arise at the lipid/water interface, where the lack of a large ceramide polar group leads to a different electron density and a different electrostatic potential but, surprisingly, not a different overall "dipole potential," when ceramide is compared to sphingomyelin.

  2. Estudio espectroscópico de la simbiótica CD-43o14304

    Science.gov (United States)

    García, L. G.; Brandi, E.; Ferrer, O. E.; Barbá, R.

    En base a un monitoreo espectroscópico de estrellas simbióticas del hemisferio sur, realizado entre 1990 y 1997, se han reunido espectros en intermedia y alta resolución de la simbiótica CD-43o14304. Se trata de un sistema binario compuesto por una enana blanca y una gigante tipo K5 con un período orbital recientemente determinado, de 1448 días. Por primera vez se analiza el comportamiento espectral del objeto en un amplio rango espectral (3700-10000 Å) y en función de las fases orbitales observadas. Se interpretan las velocidades radiales de las emisiones y absorciones presentes y las variaciones en los perfiles estructurados de las líneas de Balmer y en el resto de las emisiones.

  3. DNA-based identification of Peucedanum ostruthium specimens and detection of common adulterants by high-resolution melting curve analysis.

    Science.gov (United States)

    Schmiderer, Corinna; Ruzicka, Joana; Novak, Johannes

    2015-12-01

    Masterwort (Peucedanum ostruthium, syn. Imperatoria ostruthium, Apiaceae) is an old economic plant in Alpine countries cultivated as ornamental plant and used for spirits and in folk medicine. P. ostruthium is a species that has often been confused with related Apiaceae species or morphologically similar roots or tubers resulting in products of minor quality. Masterwort can be distinguished from other Apiaceae species by nrDNA (ITS1 and ITS2). The analysed chloroplast markers (trnK 5' intron, trnT-trnL, and psbA-trnH), however, showed no species-specific mutations. With the application of two primer pairs amplifying parts of ITS and developed for high-resolution melting curve analysis (HRM) the target species was distinguishable from the other Peucedanum and Apiaceae species of our reference set. A multiplex PCR/HRM was developed to detect adulterations with Gentiana spp., Aconitum napellus and Veratrum album.

  4. Observation of $B\\to \\phi K$ and $B\\to \\phi K^{*}$

    CERN Document Server

    Briere, R A; Ferguson, T; Vogel, H; Gritsan, A; Alexander, J P; Baker, R; Bebek, C; Berger, B E; Berkelman, K; Blanc, F; Boisvert, V; Cassel, David G; Drell, P S; Duboscq, J E; Ecklund, K M; Ehrlich, R; Gaidarev, P B; Gibbons, L K; Gittelman, B; Gray, S W; Hartill, D L; Heltsley, B K; Hopman, P I; Hsu, L; Jones, C D; Kandaswamy, J; Kreinick, D L; Lohner, M; Magerkurth, A; Meyer, T O; Mistry, N B; Nordberg, E; Palmer, M; Patterson, J R; Peterson, D; Riley, D; Romano, A; Thayer, J G; Urner, D; Valant-Spaight, B L; Viehhauser, G; Warburton, A; Avery, P; Prescott, C; Rubiera, A I; Stöck, H; Yelton, J; Brandenburg, G; Ershov, A; Kim, D Y J; Wilson, R; Bergfeld, T; Eisenstein, B I; Ernst, J; Gladding, G E; Gollin, G D; Hans, R M; Johnson, E; Karliner, I; Marsh, M A; Plager, C; Sedlack, C; Selen, M; Thaler, J J; Williams, J; Edwards, K W; Janicek, R; Patel, P M; Sadoff, A J; Ammar, R; Bean, A; Besson, D; Zhao, X; Anderson, S; Frolov, V V; Kubota, Y; Lee, S J; O'Neill, J J; Poling, R A; Riehle, T; Smith, A; Stepaniak, C J; Urheim, J; Ahmed, S; Alam, M S; Athar, S B; Jian, L; Ling, L; Saleem, M; Timm, S; Wappler, F; Anastassov, A; Eckhart, E; Gan, K K; Gwon, C; Hart, T; Honscheid, K; Hufnagel, D; Kagan, H; Kass, R; Pedlar, T K; Schwarthoff, H; Thayer, J B; Von Törne, E; Zoeller, M M; Richichi, S J; Severini, H; Skubic, P L; Undrus, A; Savinov, V; Chen, S; Fast, J; Hinson, J W; Lee, J; Miller, D H; Shibata, E I; Shipsey, I P J; Pavlunin, V; Cronin-Hennessy, D; Lyon, A L; Thorndike, E H; Coan, T E; Fadeev, V; Gao, Y S; Maravin, Y; Narsky, I; Stroynowski, R; Ye, J; Wlodek, T; Artuso, M; Boulahouache, C; Bukin, K; Dambasuren, E; Majumder, G; Mountain, R; Schuh, S; Skwarnicki, T; Stone, S; Wang, J C; Wolf, A; Wu, J; Kopp, S E; Kostin, M A; Mahmood, A H; Csorna, S E; Danko, I; McLean, K W; Xu, Z; Godang, R; Bonvicini, G; Cinabro, D; Dubrovin, M; McGee, S; Zhou, G J; Bornheim, A; Lipeles, E; Pappas, S P; Schmidtler, M; Shapiro, A; Sun, W M; Weinstein, A J; Jaffe, D E; Mahapatra, R; Masek, G; Paar, H P; Asner, D M; Eppich, A; Hill, T S; Morrison, R J

    2001-01-01

    We have studied two-body charmless hadronic decays of $B$ mesons into the final states phi K and phi K^*. Using 9.7 million $B\\bar{B}$ pairs collected with the CLEO II detector, we observe the decays B- -> phi K- and B0 -> phi K*0 with the following branching fractions: BR(B- -> phi K-)=(5.5 +2.1-1.8 +- 0.6) x 10^{-6} and BR(B0 -> phi K*0)=(11.5 +4.5-3.7 +1.8-1.7) x 10^{-6}. We also see evidence for the decays B0 -> phi K0 and B- -> phi K*-. However, since the statistical significance is not overwhelming for these modes we determine upper limits of <12.3 x 10^{-6} and <22.5 x 10^{-6} (90% C.L.) respectively.

  5. CRESCIMENTO INICIAL DE MORINGA (Moringa oleifera Lam SOB OMISSÃO DE NUTRIENTES

    Directory of Open Access Journals (Sweden)

    Hugo Vieira

    2008-01-01

    Full Text Available Moringa oleifera Lam is a leguminous species well adapted to arid and semi arid conditions and is largely used as ornamental for parks and gardens in the animal feeding and human diet and as medicinal. Since research informations on this plant species are scarce, the current work aimed to evaluate the production of leaves, stems and roots dry matter in Moringa oleifera Lam seedlings hidroponicaly grown under physiological conditions or not. The treatments used were the following: (1 nutrient solution containing all required macronutrients (experimental control or lacking (2 N; (3 P; (4 K; (5 Ca; (6 Mg and (7 S. The Moringa oleifera Lam showed different responses to the imposed treatments. Nutrient solution free of N, P and Mg decreased whole dry matter production (WDM and increased root to shoot ratios (R/S, however both parameters were not affected in plants grown under absence of K, Ca and S in the nutrient solution.

  6. Explosive welding of multifilamentary NbTi50-Cu composite superconductor

    Energy Technology Data Exchange (ETDEWEB)

    Zhang Xudong; Peng Wenan; Xiong Shougao; Ye Yongcai (Baoji Institute for Non-ferrous Metal Research (China))

    1984-01-01

    The explosive welding technique of multifilamentary superconductor, the mechanical and superconducting properties of joints are presented in this paper. Excellent metallurgical bonding is found both in Cu and in NbTi filaments of the joints. The joints have excellent bending property and high tensile strength (corresponding to 100% of the strength of the superconductor). The superconductive joints with the cross section of 3.6 x 1.8 mm/sup 2/ have a critical current of 1801A (5T at 4.2K), corresponding to 90% of that of the superconductor at the same conditions. The electric resistance of the joints is 9.5 x 10/sup -10/ ..cap omega.. 4.2K, 5.5T. The research results can be used for joining of long superconductors with large cross section as well as the current leads of the superconducting magnet.

  7. Stimulation of the N-methyl-D-aspartate receptor has a trophic effect on differentiating cerebellar granule cells

    DEFF Research Database (Denmark)

    Balázs, R; Hack, N; Jørgensen, Ole Steen

    1988-01-01

    N-methyl-D-aspartate (NMDA) supplementation of cerebellar cultures enriched in granule neurones (about 90%) prevented the extensive cell loss which occurs when cultivation takes place, in serum containing media, in the presence of 'low' K+ (5-15 mM). Estimation of tetanus toxin receptors and N......-CAM contents indicated that NMDA rescued primarily nerve cells. The influence of NMDA in promoting cell survival was blocked by the receptor antagonist, 2-amino-5-phosphonovalerate. The effect depended both on the concentration of NMDA and on the degree of depolarization of cells, the affinity in the presence...... of 15 mM K+ being similar to that of NMDA receptor binding. The results attest a new role for excitatory amino acid transmitters by showing that they can exert a stage-dependent trophic action on developing nerve cells....

  8. Measurement of the electric fluctuation spectrum of magnetohydrodynamic turbulence

    CERN Document Server

    Bale, S D; Mozer, F S; Horbury, T S; Reme, H

    2005-01-01

    Magnetohydrodynamic (MHD) turbulence in the solar wind is observed to show the spectral behavior of classical Kolmogorov fluid turbulence over an inertial subrange and departures from this at short wavelengths, where energy should be dissipated. Here we present the first measurements of the electric field fluctuation spectrum over the inertial and dissipative wavenumber ranges in a $\\beta \\gtrsim 1$ plasma. The $k^{-5/3}$ inertial subrange is observed and agrees strikingly with the magnetic fluctuation spectrum; the wave phase speed in this regime is shown to be consistent with the Alfv\\'en speed. At smaller wavelengths $k \\rho_i \\geq 1$ the electric spectrum is softer and is consistent with the expected dispersion relation of short-wavelength kinetic Alfv\\'en waves. Kinetic Alfv\\'en waves damp on the solar wind ions and electrons and may act to isotropize them. This effect may explain the fluid-like nature of the solar wind.

  9. Implementing a Manualized, Classroom Transition Intervention for Students With ASD in Underresourced Schools.

    Science.gov (United States)

    Iadarola, Suzannah; Shih, Wendy; Dean, Michelle; Blanch, Erica; Harwood, Robin; Hetherington, Susan; Mandell, David; Kasari, Connie; Smith, Tristram

    2017-07-01

    Children with autism spectrum disorder (ASD) in public education settings experience difficulties with transitions during classroom routines, which can result in challenging behavior. Single-subject research supports techniques for transitions, but school-based approaches often require resources and training unavailable in low-resource districts, limiting implementation. We developed and evaluated the Schedules, Tools, and Activities for Transitions (STAT) program, a short-term, manualized intervention of behavioral supports to support daily routine transitions for students with ASD (K-5) in underresourced districts. We utilized a multisite, cluster-randomized, group comparison design (immediate treatment versus waitlist) with matched pairs ( n = 150 students, 57 educators). Data indicated (a) no group differences for academic engagement or classroom independence, and (b) an advantage for STAT in reducing challenging behavior and increasing teacher fidelity. Results show preliminary support for an intervention that is feasible and perceived as sustainable in real-world settings.

  10. Towards the physical vacuum of cosmic inflation

    Directory of Open Access Journals (Sweden)

    Hongliang Jiang

    2016-09-01

    Full Text Available There have been long debates about the initial conditions of inflationary perturbations. In this work we explicitly show the decay of excited states during inflation via interactions from the renormalization group point of view. For this purpose, we note that the folded shape non-Gaussianity can be interpreted as the decay of the non-Bunch–Davies initial condition. The one loop diagrams with non-Bunch–Davies propagators are calculated to uncover the decay of such excited states. We find that the decay of amplitude is contributed by the folded shape of loop momentum and is irrelevant to the UV part. The conformal decay rate is related to the strength of non-Gaussianity via Γ∼(fNLλ2Pζk5O(τ4,τ04. The observed smallness of non-Gaussianity keeps the window open for probing inflationary initial conditions and trans-Planckian physics.

  11. Induction by fructose force-feeding of histone H3 and H4 acetylation at their lysine residues around the Slc2a5 gene and its expression in mice.

    Science.gov (United States)

    Honma, Kazue; Mochizuki, Kazuki; Goda, Toshinao

    2013-01-01

    It has been reported that fructose force-feeding rapidly induced jejunal Slc2a5 gene expression in rodents. We demonstrate in this study that acetylation at lysine (K) 9 of histone H3 and acetylation at K5 and K16 of histone H4 were more enhanced in the promoter/enhancer to transcribed regions of the Slc2a5 gene in fructose force-fed mice than in glucose force-fed mice. However, fructose force-feeding did not induce acetylation at K14 of histone H3, or at K8 and K12 of histone H4 around the Slc2a5 gene. These results suggest that fructose force-feeding induced selective histone acetylation, particularly of H3 and H4, around the jejunal Slc2a5 gene in mice.

  12. Isolation of Klebsiella terrigena from human feces: biochemical reactions, capsule types, and antibiotic sensitivity.

    Science.gov (United States)

    Podschun, R

    1991-04-01

    Colonization of the human intestinal tract by a newly proposed species, K. terrigena, was investigated. 5377 different stool specimens from healthy persons (food handlers) yielded 50 isolates (0.9%). Biochemically, low frequencies in the degradation of urea, dulcitol, and utilization of citrate at 37 degrees C were found when compared to K. pneumoniae. At 30 degrees C, urea hydrolysis was observed twice as often as at 37 degrees C. Apart from ampicillin, K. terrigena was susceptible to 12 other antimicrobial drugs tested. Multiple drug resistance was rare, few isolates being resistant against 2-4 antibiotic agents. Capsule typing revealed 30 different serotypes, K 70 and K 14 were the most frequent. Six strains expressed capsule types K 2 and K 5, which have been reported to be associated with virulence in K. pneumoniae. A possible pathogenic role of K. terrigena is discussed.

  13. 低营养物浓度培养基分离淀粉酶分泌细菌及其特性的初步研究%Research on the Isolation of Amylase-secreting Bacteria from Soil by Culture Mediums with Low-concentration of Nutrients & Its Characteristics

    Institute of Scientific and Technical Information of China (English)

    代先祝

    2011-01-01

    采用不经过富集培养直接将土壤稀释涂布于营养物浓度较低的1/10LB固体培养基上,常温培养,然后转接至加淀粉的1/10LB固体培养基,用碘液初步检测淀粉酶分泌情况的方法,从土壤中分离出了5株能分泌淀粉酶的细菌,分别命名为K-1、K-2、K-3、K-4、K-5。并对其不同pH值、温度条件下的生长情况及分解淀粉产生还原糖的情况进行了初步研究。结果表明,菌株K-2具有产耐酸碱淀粉酶活性,在pH410范围内均可分解:定粉产生还原糖;K-4具有产低温淀粉酶活性,4℃能分解淀粉;K-5具有产高温耐碱淀粉酶活性。研究结果表明,采用低营养物浓度能从土壤中获得丰富多样的淀粉酶分泌细菌,为从自然环境中获取更丰富多样的微生物资源提供了基础参老.%In the experiment, diluted soil samples were directly plated onto culture mediums with low concentration of nutrients (1/10 diluted LB solid culture medium) and cultivated at room temperature instead of enrichment culture, then it was plated onto 1/10 diluted LB solid culture medium with starch addition, and the secretion of amylase was determined by adding iodine solution to the surroundings of bacterial colonies to observe if it became blue, and 5 amylase-secreting bacteria strains were finally isolated and named as K-l, K-2, K-3, K-4., and K-5. The effects of different pH value and different temperature on their growth and their amylase hydrolysis status were investigated. The results showed that strain K-2 had acid & alkali-resisting amylase activity and it could achieve amylase hydrolysis in wide range ofpH (pH4- 10), and strain K-4 had activity at low temperature (it could achieve amylase hydrolysis at 4 ℃), and strain K-5 had alkali-resisting amylase activity at high temperature. The results of our study suggested that various amylase-secreting bacteria could be obtained from soil by culture mediums

  14. The number of k-colorings of a graph on a fixed surface

    DEFF Research Database (Denmark)

    Thomassen, Carsten

    2006-01-01

    We prove that, for every fixed surface S, there exists a largest positive constant c such that every 5-colorable graph with n vertices on S has at least c center dot 2(n) distinct 5-colorings. This is best possible in the sense that, for each sufficiently large natural number n, there is a graph...... with n vertices on S that has precisely c center dot 2(n) distinct 5-colorings. For the sphere the constant c is 15/2, and for each other surface, it is a finite problem to determine c. There is an analogous result for k-colorings for each natural number k > 5. (c) 2006 Elsevier B.V. All rights reserved....

  15. SOX4 expression in bladder carcinoma

    DEFF Research Database (Denmark)

    Aaboe, Mads; Birkenkamp-Demtroder, Karin; Wiuf, Carsten;

    2006-01-01

    The human transcription factor SOX4 was 5-fold up-regulated in bladder tumors compared with normal tissue based on whole-genome expression profiling of 166 clinical bladder tumor samples and 27 normal urothelium samples. Using a SOX4-specific antibody, we found that the cancer cells expressed...... strongly impaired cell viability and promoted apoptosis. To characterize downstream target genes and SOX4-induced pathways, we used a time-course global expression study of the overexpressed SOX4. Analysis of the microarray data showed 130 novel SOX4-related genes, some involved in signal transduction (MAP......2K5), angiogenesis (NRP2), and cell cycle arrest (PIK3R3) and others with unknown functions (CGI-62). Among the genes regulated by SOX4, 25 contained at least one SOX4-binding motif in the promoter sequence, suggesting a direct binding of SOX4. The gene set identified in vitro was analyzed...

  16. Atmospheric chemistry of HFC-134a. Kinetic and mechanistic study of the CF3CFHO2 + NO2 reaction

    DEFF Research Database (Denmark)

    Møgelberg, T.E.; Nielsen, O.J.; Sehested, J.;

    1994-01-01

    A pulse radiolysis system was used to study the kinetics of the reaction of CF3CFHO2 with NO2. By monitoring the rate of the decay of NO2 using its absorption at 400 nm the reaction rate constant was determined to be k = (5.0 +/- 0.5) x 10(-12) cm3 molecule-1 s-1. A long path length Fourier......-transform infrared technique was used to investigate the thermal decomposition of the product CF3CFHO2NO2. At 296 K in the presence of 700 Torr of air, decomposition of CF3CFHO2NO2 was rapid (greater than 90% decomposition within 3 min). The results are discussed in the context of atmospheric chemistry of CF3CFH2...

  17. The Prediction of Metal Slopping in LD Converter on Base an Acoustic Signal

    Directory of Open Access Journals (Sweden)

    Kostúr, K.

    2006-01-01

    Full Text Available The negative influences of slopping in a BOF are pollution to the environment. They give lower yield and cause equipment damage. The prediction of these phenomena is based on information processing from the measuring microphone. The change of frequency in certain range is done by a signal for the prediction of slopping. In this paper two methods for prediction of slopping are described. The first method is based on measuring and processing of sound emitted from the vessel during the blow. The second method utilizes Fourier’s transformation for processing of acoustic signal from sonic meter. The success rate of prediction has been evaluated by help of five criterions. It is possible to forecast the slopping on selected frequency (band. It is the essence of the second method, because this method has high success (criterion K1. Note, that criterion K5 defines acknowledgment of duration slopping. This criterion has the highest value.

  18. Thermal decomposition of 1-chloropropane behind the reflected shock waves in the temperature range of 1015-1220 K: Single pulse shock tube and computational studies

    Indian Academy of Sciences (India)

    G Sudhakar; B Rajakumar

    2014-07-01

    The thermal decomposition of 1-chloropropane in argon was studied behind reflected shock waves in a single pulse shock tube over the temperature range of 1015-1220 K. The reaction mainly goes through unimolecular elimination of HCl. The major products observed in the decomposition are propylene and ethylene, while the minor products identified are methane and propane. The rate constant for HCl elimination in the studied temperature range is estimated to be k(1015-1220 K) = 1.63 × 1013exp(-(60.1 ± 1.0) kcal mol-1/RT) s-1. The DFT calculations were carried out to identify the transition state(s) for the major reaction channel; and rate coefficient for this reaction is obtained to be k(800-1500 K) = 5.01 × 1014exp(-(58.8) kcal mol-1/RT) s-1. The results are compared with the experimental findings.

  19. A new crystal structure for (BEDT–TTF)2SbF6 and some of its physical properties

    Indian Academy of Sciences (India)

    G K R Senadeera; T Mori

    2005-02-01

    A new crystal structure for bis(ethylenedithio)tetrathiafulvalene [(BEDT–TTF)2 SbF6] was determined by single crystal X-ray diffraction. The crystal structure was refined in the $P \\overline{1}$ space group at room temperature. Crystal data for new structure are as follows: triclinic, = 8.670 (2) Å, = 8.664 (2) Å, = 16.842 (5) Å, = 89$^\\circ \\cdot$29 (2), = 90$^\\circ \\cdot$71 (3), = 92$^\\circ \\cdot$67 (1), = 1263.64 Å3, = 2, = 2.136 g cm-3, (Mo–K), = 0.7107 Å, = 0.057 for a total of 5517 independent reflections. The donors form a trimerized column, and the band structure calculated by the tight-binding approximation shows band insulator properties. The temperature dependent of the d.c. resistivity shows a semiconducting behaviour with room temperature resistivity along the -axis; $\\rho_{290 K}$ = 5.6 ohm cm.

  20. On the All-Speed Roe-type Scheme for Large Eddy Simulation of Homogeneous Decaying Turbulence

    CERN Document Server

    Li, Xue-song

    2015-01-01

    As the representative of the shock-capturing scheme, the Roe scheme fails to LES because important turbulent characteristics cannot be reproduced such as the famous k-5/3 spectral law owing to large numerical dissipation. In this paper, the Roe scheme is divided into five parts: , , , , and , which means basic upwind dissipation, pressure-difference-driven and velocity-difference-driven modification of the interface fluxes and pressure, respectively. Then, the role of each part on LES is investigated by homogeneous decaying turbulence. The results show that the parts , , and have little effect on LES. It is important especially for because it is necessary for computation stability. The large numerical dissipation is due to and , and each of them has much larger dissipation than SGS dissipation. According to these understanding, an improved all-speed LES-Roe scheme is proposed, which can give enough good LES results for even coarse grid resolution with usually adopted reconstruction.

  1. On the Push-and-Pull Operation of the New Bridge After the Old Girder Being Replaced with Mortar Rubble Masonry%以浆砌片石顶替旧梁后新桥顶进施工技术

    Institute of Scientific and Technical Information of China (English)

    魏炜

    2015-01-01

    近年来,随着交通流量的增大,市政道路工程的设计宽度显著增加,与之对应的对既有铁路桥梁配合市政道路拓宽拆旧顶新的技术成为施工难题.大灰厂东路市政道路下穿京原铁路K5+315.7顶进箱涵工程中,采用既有梁桥砌筑浆砌片石,置换既有T梁桥,然后顶进施工.介绍了技术方案实施过程,实际实施效果良好.

  2. The physical properties of Gd3Ru: A real candidate for a practical cryogenic refrigerator

    Science.gov (United States)

    Monteiro, J. C. B.; dos Reis, R. D.; Gandra, F. G.

    2015-05-01

    The magnetization, the specific heat, and the magnetocaloric effect (MCE) for Gd3Ru are presented as function of temperature at different magnetic fields. The results show a maximum entropy change - Δ S = 30 J/kg K @ 5 T, which is the highest value for the R3M compounds. With a non-hysteretic transition of first order type at TC = 54 K, it presents a temperature change ΔTmax = 5.7 K around 59 K with a refrigerating cooling power of 700 J/kg and these results are comparable to values found for giant MCE materials. This compound is stable and able to operate at temperatures between 90 K and 40 K with a minimum - Δ S = 5 J/kg K. These figures were obtained by sweeping the magnetic field without using sample preparation routines. This methodology is appropriate to evaluate the MCE for the cycling process of a cryogenic magnetic refrigerator.

  3. Electronic Principles Inventory, Keesler Technical Training Center.

    Science.gov (United States)

    1984-04-01

    6CPm.-Z 3 LI K- 5. o - ..)G 5- 5 w 0 0 0 5 00 5u 5u u " f 4- V- IP I0 I b10 n2Ui 0 a. 00 0 0 %A 50 in to 0 0 % f0 0 ow55~ w5- 0uisto LO 0 5 ) 05- 5 -5...0-i. U0 0 4 z I.. 61 z I-i mO1 P1- 19 . w - =0 0U V nif :, 0 0 1- ..j 5’,Z Z2Z -0m :3 - . N :0 x.0 0L = 0.m Q I-. zx o -0Q CLQ4 0. -o La !itw ol0 00

  4. A Copernicus survey of Mg II emission in late-type stars

    Science.gov (United States)

    Weiler, E. J.; Oegerle, W. R.

    1979-01-01

    The behavior of Mg II emission in late-type stars is examined using scan data obtained with the Copernicus satellite. The luminosity in the Mg II k emission line was found to be closely related to stellar absolute magnitude, leading to the suggestion that such correlation may be very useful for future UV observations. The stellar surface flux in the k line was observed to be roughly constant or to decrease slowly with later spectral type, a finding which is then used to show that the pressure at the top of the chromosphere decreases with later spectral type, in agreement with the conclusions by McClintock et al. (1975). An asymmetry in the Mg II k line was noticed to be present in the available data for the stars later than K2-K5.

  5. “滑出来”的经典——三星YP-S5 MP3播放器测试

    Institute of Scientific and Technical Information of China (English)

    王岩

    2008-01-01

    MP3播放器 追求个性的年代,一切事物都可以超出想象,比如一个小小的MP3播放器,也会有让人意想不到它的造型,三星YP-S5在设计上花了很多心思。三星YP-S5(以下简称S5)选用的材料与之前的YP-K5相似,具备很强耐磨、抗冲击性,而且有细腻光滑的手感,我们拿到的产品是白色的,看起来非常时尚。

  6. The influence of the modification of acidic montmorillonites with polyacrylamide and copper deposition on SCR-NH3 catalytic performance

    Directory of Open Access Journals (Sweden)

    Świrk Katarzyna

    2017-01-01

    Full Text Available The aim of this work was to study the influence of the modification of montmorillonites by carbonaceous and Al species as well as copper deposition. Commercial acid-treated montmorillonites, K5 and K30 (Sigma-Aldrich GmBH, were modified and used as catalysts in Selective Catalytic Reduction process of nitrogen oxides by ammonia. The characterisation was carried out by low-temperature nitrogen sorption, Fourier-transform-infrared spectroscopy and X-ray diffraction. Catalytic performance in SCR-NH3 of so-modified montmorillonites was compared under the following conditions: mass of catalyst: 200 g, flow 100 cm3/min, reaction mixture: 800 ppm NO, 800 ppm NH3, 3 % O2, and He. The modification with copper and polyacrylamide led to the increase in NO conversion. The studied catalysts showed low N2O formation.

  7. Optimal Multiplexing Gain of K-user Line-of-Sight Interference Channels with Polarization

    CERN Document Server

    Chae, Sung ho; Chung, Sae-Young

    2009-01-01

    We consider the multiplexing gain (MUXG) of the fully connected K-user line-of-sight (LOS) interference channels (ICs). A polarimetric antenna composed of 3 orthogonal electric dipoles and 3 orthogonal magnetic dipoles is considered where all 6 dipoles are co-located. In case of K-user IC with single polarization, the maximum achievable MUXG is K regardless of the number of transmit and receive antennas because of the key-hole effect. With polarization, a trivial upper bound on the MUXG is 2K. We propose a zero forcing (ZF) scheme for the K-user LOS IC, where each user uses one or more polarimetric antennas. By using the proposed ZF scheme, we find minimal antenna configurations that achieve this bound for K 5, we show that the optimal MUXG of 2K is achieved with M = (K+1)/6 polarimetric antennas at each user.

  8. MESA meets MURaM: Surface effects in main-sequence solar-like oscillators computed using three-dimensional radiation hydrodynamics simulations

    CERN Document Server

    Ball, W H; Cameron, R H; Gizon, L

    2016-01-01

    ... [C]urrent stellar models predict oscillation frequencies that are systematically affected by simplified modelling of the near-surface layers. We use three-dimensional radiation hydrodynamics simulations to better model the near-surface equilibrium structure of dwarfs with spectral types F3, G2, K0 and K5, and examine the differences between oscillation mode frequencies. ... We precisely match stellar models to the simulations' gravities and effective temperatures at the surface, and to the temporally- and horizontally-averaged densities and pressures at their deepest points. We then replace the near-surface structure with that of the averaged simulation and compute the change in the oscillation mode frequencies. We also fit the differences using several parametric models currently available in the literature. The surface effect in the stars of solar-type and later is qualitatively similar and changes steadily with decreasing effective temperature. In particular, the point of greatest frequency difference ...

  9. The TESIS Project: Are Type 2 QSO Hidden in X-Ray Emitting EROs?

    Science.gov (United States)

    Severgnini, P.; Della Ceca, R.; Braito, V.; Saracco, P.; Longhetti, M.; Bender, R.; Drory, N.; Feulner, G.; Hopp, U.; Mannucci, F.; Maraston, C.

    X-ray selected EROs are, on average, the hardest X-ray sources in medium and deep X-ray fields. This coupled with their extremely red colors (R-K > 5) suggest that they represent one of the most promising population where looking for high-luminosity (LX > 1044 erg s-1) and X-ray obscured (NH > 1022 cm-2) type2 AGNs, the so called QSO2 (e.g., [5]; [4]; Mignoli et al. submitted to A&A). These latter are predicted in large density by the synthesis model of the Cosmic X-ray background [9] even if only few observational evidences have been found so far (e.g., [1] and references therein; Caccianiga et al. A&A accepted).

  10. Strong pinning in very fast grown reactive co-evaporated GdBa2Cu3O7 coated conductors

    Directory of Open Access Journals (Sweden)

    J. L. MacManus-Driscoll

    2014-08-01

    Full Text Available We report on compositional tuning to create excellent field-performance of Jc in “self-doped,” GdBa2Cu3O7−y (GdBCO coated conductors grown by ultrafast reactive co-evaporation. In order to give excess liquid and Gd2O3, the overall compositions were all Ba-poor and Cu-rich compared to GdBCO. The precise composition was found to be critical to the current carrying performance. The most copper-rich composition had an optimum self-field Jc of 3.2 MA cm−2. A more Gd-rich composition had the best in-field performance because of the formation of low coherence, splayed Gd2O3 nanoparticles, giving Jc (77 K, 1 T of over 1 MA cm−2 and Jc (77 K, 5 T of over 0.1 MA cm−2.

  11. Volume and structural analysis of super-cooled water under high pressure

    Science.gov (United States)

    Duki, Solomon F.; Tsige, Mesfin

    2012-02-01

    Motivated by recent experimental study of super-cooled water at high pressure [1], we performed atomistic molecular dynamic simulations study on bulk water molecules at isothermal-isobaric ensemble. These simulations are performed at temperatures that range from 40 K to 380 K using two different cooling rates, 10K/ns and 10K/5ns, and pressure that ranges from 1atm to 10000 atm. Our analysis for the variation of the volume of the bulk sample against temperature indicates a downward concave shape for pressures above certain values, as reported in [1]. The same downward concave behavior is observed at high pressure on the mean-squared-displacements (MSD) of the water molecules when the MSD is plotted against time. To get further insight on the effect of the pressure on the sample we have also performed a structural analysis of the sample.[4pt] [1] O. Mishima, J. Chem. Phys. 133, 144503 (2010);

  12. Role of T-type calcium channels in myogenic tone of skeletal muscle resistance arteries

    DEFF Research Database (Denmark)

    VanBavel, Ed; Sorop, Oana; Andreasen, Ditte

    2002-01-01

    T-type calcium channels may be involved in the maintenance of myogenic tone. We tested their role in isolated rat cremaster arterioles obtained after CO(2) anesthesia and decapitation. Total RNA was analyzed by RT-PCR and Southern blotting for calcium channel expression. We observed expression...... of voltage-operated calcium (Ca(V)) channels Ca(V)3.1 (T-type), Ca(V)3.2 (T-type), and Ca(V)1.2 (L-type) in cremaster arterioles (n = 3 rats). Amplification products were observed only in the presence of reverse transcriptase and cDNA. Concentration-response curves of the relatively specific L-type blocker......); K(+) -5.4 +/- 0.3 (n = 4); all log(IC(50)) P cremaster muscle arterioles....

  13. Tanker Structural Analysis for Minor Collisions

    Science.gov (United States)

    1975-12-01

    masses (including virtual masses of the water), the initial bearings, and velocities. 2. Throughout the analysis, the bow of the striking ship Is...initial velocity of the striking ship: m( F ______ (1 t 0 V20) =0.0 f= virtual mass, ship I 2 = virtual mass, ship 2~ m I V . V f ’ K’ Jt 11 FIUR m-2...situ .K. 5Y( i~ lZAKD bow $H 14ILIQj P Lh5T I C. EQ k Y kps) 0 0 94-1 W~IAk) J~~E 0 oC4O.1 ,I Hi PL~c,1C. tlA% ;OQ)- AULA / ;0) 4 4 4~IN -c Q

  14. Observation of new charmless decays of bottom hadrons.

    Science.gov (United States)

    Aaltonen, T; Adelman, J; Akimoto, T; Alvarez González, B; Amerio, S; Amidei, D; Anastassov, A; Annovi, A; Antos, J; Apollinari, G; Apresyan, A; Arisawa, T; Artikov, A; Ashmanskas, W; Attal, A; Aurisano, A; Azfar, F; Azzurri, P; Badgett, W; Barbaro-Galtieri, A; Barnes, V E; Barnett, B A; Bartsch, V; Bauer, G; Beauchemin, P-H; Bedeschi, F; Beecher, D; Behari, S; Bellettini, G; Bellinger, J; Benjamin, D; Beretvas, A; Beringer, J; Bhatti, A; Binkley, M; Bisello, D; Bizjak, I; Blair, R E; Blocker, C; Blumenfeld, B; Bocci, A; Bodek, A; Boisvert, V; Bolla, G; Bortoletto, D; Boudreau, J; Boveia, A; Brau, B; Bridgeman, A; Brigliadori, L; Bromberg, C; Brubaker, E; Budagov, J; Budd, H S; Budd, S; Burke, S; Burkett, K; Busetto, G; Bussey, P; Buzatu, A; Byrum, K L; Cabrera, S; Calancha, C; Campanelli, M; Campbell, M; Canelli, F; Canepa, A; Carls, B; Carlsmith, D; Carosi, R; Carrillo, S; Carron, S; Casal, B; Casarsa, M; Castro, A; Catastini, P; Cauz, D; Cavaliere, V; Cavalli-Sforza, M; Cerri, A; Cerrito, L; Chang, S H; Chen, Y C; Chertok, M; Chiarelli, G; Chlachidze, G; Chlebana, F; Cho, K; Chokheli, D; Chou, J P; Choudalakis, G; Chuang, S H; Chung, K; Chung, W H; Chung, Y S; Chwalek, T; Ciobanu, C I; Ciocci, M A; Clark, A; Clark, D; Compostella, G; Convery, M E; Conway, J; Cordelli, M; Cortiana, G; Cox, C A; Cox, D J; Crescioli, F; Cuenca Almenar, C; Cuevas, J; Culbertson, R; Cully, J C; Dagenhart, D; Datta, M; Davies, T; de Barbaro, P; De Cecco, S; Deisher, A; De Lorenzo, G; Dell'Orso, M; Deluca, C; Demortier, L; Deng, J; Deninno, M; Derwent, P F; di Giovanni, G P; Dionisi, C; Di Ruzza, B; Dittmann, J R; D'Onofrio, M; Donati, S; Dong, P; Donini, J; Dorigo, T; Dube, S; Efron, J; Elagin, A; Erbacher, R; Errede, D; Errede, S; Eusebi, R; Fang, H C; Farrington, S; Fedorko, W T; Feild, R G; Feindt, M; Fernandez, J P; Ferrazza, C; Field, R; Flanagan, G; Forrest, R; Frank, M J; Franklin, M; Freeman, J C; Furic, I; Gallinaro, M; Galyardt, J; Garberson, F; Garcia, J E; Garfinkel, A F; Genser, K; Gerberich, H; Gerdes, D; Gessler, A; Giagu, S; Giakoumopoulou, V; Giannetti, P; Gibson, K; Gimmell, J L; Ginsburg, C M; Giokaris, N; Giordani, M; Giromini, P; Giunta, M; Giurgiu, G; Glagolev, V; Glenzinski, D; Gold, M; Goldschmidt, N; Golossanov, A; Gomez, G; Gomez-Ceballos, G; Goncharov, M; González, O; Gorelov, I; Goshaw, A T; Goulianos, K; Gresele, A; Grinstein, S; Grosso-Pilcher, C; Grundler, U; Guimaraes da Costa, J; Gunay-Unalan, Z; Haber, C; Hahn, K; Hahn, S R; Halkiadakis, E; Han, B-Y; Han, J Y; Happacher, F; Hara, K; Hare, D; Hare, M; Harper, S; Harr, R F; Harris, R M; Hartz, M; Hatakeyama, K; Hays, C; Heck, M; Heijboer, A; Heinrich, J; Henderson, C; Herndon, M; Heuser, J; Hewamanage, S; Hidas, D; Hill, C S; Hirschbuehl, D; Hocker, A; Hou, S; Houlden, M; Hsu, S-C; Huffman, B T; Hughes, R E; Husemann, U; Hussein, M; Huston, J; Incandela, J; Introzzi, G; Iori, M; Ivanov, A; James, E; Jang, D; Jayatilaka, B; Jeon, E J; Jha, M K; Jindariani, S; Johnson, W; Jones, M; Joo, K K; Jun, S Y; Jung, J E; Junk, T R; Kamon, T; Kar, D; Karchin, P E; Kato, Y; Kephart, R; Keung, J; Khotilovich, V; Kilminster, B; Kim, D H; Kim, H S; Kim, H W; Kim, J E; Kim, M J; Kim, S B; Kim, S H; Kim, Y K; Kimura, N; Kirsch, L; Klimenko, S; Knuteson, B; Ko, B R; Kondo, K; Kong, D J; Konigsberg, J; Korytov, A; Kotwal, A V; Kreps, M; Kroll, J; Krop, D; Krumnack, N; Kruse, M; Krutelyov, V; Kubo, T; Kuhr, T; Kulkarni, N P; Kurata, M; Kwang, S; Laasanen, A T; Lami, S; Lammel, S; Lancaster, M; Lander, R L; Lannon, K; Lath, A; Latino, G; Lazzizzera, I; LeCompte, T; Lee, E; Lee, H S; Lee, S W; Leone, S; Lewis, J D; Lin, C-S; Linacre, J; Lindgren, M; Lipeles, E; Lister, A; Litvintsev, D O; Liu, C; Liu, T; Lockyer, N S; Loginov, A; Loreti, M; Lovas, L; Lucchesi, D; Luci, C; Lueck, J; Lujan, P; Lukens, P; Lungu, G; Lyons, L; Lys, J; Lysak, R; Macqueen, D; Madrak, R; Maeshima, K; Makhoul, K; Maki, T; Maksimovic, P; Malde, S; Malik, S; Manca, G; Manousakis-Katsikakis, A; Margaroli, F; Marino, C; Marino, C P; Martin, A; Martin, V; Martínez, M; Martínez-Ballarín, R; Maruyama, T; Mastrandrea, P; Masubuchi, T; Mathis, M; Mattson, M E; Mazzanti, P; McFarland, K S; McIntyre, P; McNulty, R; Mehta, A; Mehtala, P; Menzione, A; Merkel, P; Mesropian, C; Miao, T; Miladinovic, N; Miller, R; Mills, C; Milnik, M; Mitra, A; Mitselmakher, G; Miyake, H; Moggi, N; Moon, C S; Moore, R; Morello, M J; Morlock, J; Movilla Fernandez, P; Mülmenstädt, J; Mukherjee, A; Muller, Th; Mumford, R; Murat, P; Mussini, M; Nachtman, J; Nagai, Y; Nagano, A; Naganoma, J; Nakamura, K; Nakano, I; Napier, A; Necula, V; Nett, J; Neu, C; Neubauer, M S; Neubauer, S; Nielsen, J; Nodulman, L; Norman, M; Norniella, O; Nurse, E; Oakes, L; Oh, S H; Oh, Y D; Oksuzian, I; Okusawa, T; Orava, R; Osterberg, K; Griso, S Pagan; Palencia, E; Papadimitriou, V; Papaikonomou, A; Paramonov, A A; Parks, B; Pashapour, S; Patrick, J; Pauletta, G; Paulini, M; Paus, C; Peiffer, T; Pellett, D E; Penzo, A; Phillips, T J; Piacentino, G; Pianori, E; Pinera, L; 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Squillacioti, P; Stanitzki, M; St Denis, R; Stelzer, B; Stelzer-Chilton, O; Stentz, D; Strologas, J; Strycker, G L; Stuart, D; Suh, J S; Sukhanov, A; Suslov, I; Suzuki, T; Taffard, A; Takashima, R; Takeuchi, Y; Tanaka, R; Tecchio, M; Teng, P K; Terashi, K; Tesarek, R; Thom, J; Thompson, A S; Thompson, G A; Thomson, E; Tipton, P; Ttito-Guzmán, P; Tkaczyk, S; Toback, D; Tokar, S; Tollefson, K; Tomura, T; Tonelli, D; Torre, S; Torretta, D; Totaro, P; Tourneur, S; Trovato, M; Tsai, S-Y; Tu, Y; Turini, N; Ukegawa, F; Vallecorsa, S; van Remortel, N; Varganov, A; Vataga, E; Vázquez, F; Velev, G; Vellidis, C; Vidal, M; Vidal, R; Vila, I; Vilar, R; Vine, T; Vogel, M; Volobouev, I; Volpi, G; Wagner, P; Wagner, R G; Wagner, R L; Wagner, W; Wagner-Kuhr, J; Wakisaka, T; Wallny, R; Wang, S M; Warburton, A; Waters, D; Weinberger, M; Weinelt, J; Wester, W C; Whitehouse, B; Whiteson, D; Wicklund, A B; Wicklund, E; Wilbur, S; Williams, G; Williams, H H; Wilson, P; Winer, B L; Wittich, P; Wolbers, S; Wolfe, C; Wright, T; Wu, X; Würthwein, F; Xie, S; Yagil, A; Yamamoto, K; Yamaoka, J; Yang, U K; Yang, Y C; Yao, W M; Yeh, G P; Yoh, J; Yorita, K; Yoshida, T; Yu, G B; Yu, I; Yu, S S; Yun, J C; Zanello, L; Zanetti, A; Zhang, X; Zheng, Y; Zucchelli, S

    2009-07-17

    We search for new charmless decays of neutral b hadrons to pairs of charged hadrons, using 1 fb(-1) of data collected by the CDF II detector at the Fermilab Tevatron. We report the first observation of the Bs0-->K-pi+ decay and measure B(Bs0-->K-pi+)=(5.0+/-0.7(stat)+/-0.8(syst))x10(-6). We also report the first observation of charmless b-baryon decays, and measure B(Lambdab0-->ppi-)=(3.5+/-0.6(stat)+/-0.9(syst))x10(-6) and B(Lambdab0-->pK-)=(5.6+/-0.8(stat)+/-1.5(syst))x10(-6). No evidence is found for other modes, and we set the limit B(Bs0-->pi+pi;-)<1.2x10(-6) at 90% C.L.

  15. Measurement of the branching fraction and decay rate asymmetry of B- --> D_{pi+pi-pi0}K-

    CERN Document Server

    Aubert, B; Boutigny, D; Couderc, F; Karyotakis, Yu; Lees, J P; Poireau, V; Tisserand, V; Zghiche, A; Graugès-Pous, E; Palano, A; Pappagallo, M; Pompili, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Battaglia, M; Borgland, A W; Breon, A B; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Day, C T; Gill, M S; Gritsan, A V; Groysman, Y; Jacobsen, R G; Kadel, R W; Kadyk, J; Kerth, L T; Kolomensky, Yu G; Kukartsev, G; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, M T; Wenzel, W A; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Fritsch, M; Goetzen, K; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schröder, T; Steinke, M; Boyd, J T; Burke, J P; Chevalier, N; Cottingham, W N; Kelly, M P; Çuhadar-Dönszelmann, T; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Khan, A; Kyberd, P; Teodorescu, L; Blinov, A E; Blinov, V E; Bukin, A D; Druzhinin, V P; Golubev, V B; Kravchenko, E A; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Yushkov, A N; Best, D; Bondioli, M; Bruinsma, M; Chao, M; Eschrich, I; Kirkby, D; Lankford, A J; Mandelkern, M A; Mommsen, R K; Röthel, W; Stoker, D P; Buchanan, C; Hartfiel, B L; Weinstein, A J R; Foulkes, S D; Gary, J W; Long, O; Shen, B C; Wang, K; Zhang, L; Del Re, D; Hadavand, H K; Hill, E J; MacFarlane, D B; Paar, H P; Rahatlou, S; Sharma, V; Berryhill, J W; Campagnari, C; Cunha, A; Dahmes, B; Hong, T M; Lu, A; Mazur, M A; Richman, J D; Verkerke, W; Beck, T W; Eisner, A M; Flacco, C J; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dubois-Felsmann, G P; Dvoretskii, A; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Andreassen, R; Jayatilleke, S M; Mancinelli, G; Meadows, B T; Sokoloff, M D; Blanc, F; Bloom, P; Chen, S; Ford, W T; Nauenberg, U; Olivas, A; Rankin, P; Ruddick, W O; Smith, J G; Ulmer, K A; Wagner, S R; Zhang, J; Chen, A; Eckhart, E A; Soffer, A; Toki, W H; Wilson, R J; Zeng, Q; Feltresi, E; Hauke, A; Spaan, B; Altenburg, D; Brandt, T; Brose, J; Dickopp, M; Klose, V; Lacker, H M; Nogowski, R; Otto, S; Petzold, A; Schott, G; Schubert, J; Schubert, K R; Schwierz, R; Sundermann, J E; Bernard, D; Bonneaud, G R; Grenier, P; Schrenk, S; Thiebaux, C; Vasileiadis, G; Verderi, M; Bard, D J; Clark, P J; Gradl, W; Muheim, F; Playfer, S; Xie, Y; Andreotti, M; Azzolini, V; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Piemontese, L; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; De Sangro, R; Finocchiaro, G; Patteri, P; Peruzzi, I M; Piccolo, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Lo Vetere, M; Macri, M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Bailey, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Won, E; Dubitzky, R S; Langenegger, U; Marks, J; Schenk, S; Uwer, U; Bhimji, W; Bowerman, D A; Dauncey, P D; 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Kovalskyi, D; Lae, C K; Lillard, V; Roberts, D A; Simi, G; Blaylock, G; Dallapiccola, C; Hertzbach, S S; Kofler, R; Koptchev, V B; Li, X; Moore, T B; Saremi, S; Stängle, H; Willocq, S; Cowan, R; Koeneke, K; Sciolla, G; Sekula, S J; Taylor, F; Yamamoto, R K; Kim, H; Patel, P M; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Taras, P; Viaud, B; Nicholson, H; Cavallo, N; De Nardo, Gallieno; Fabozzi, F; Gatto, C; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Bulten, H; Raven, G; Snoek, H L; Wilden, L; Jessop, C P; LoSecco, J M; Allmendinger, T; Benelli, G; Gan, K K; Honscheid, K; Hufnagel, D; Jackson, P D; Kagan, H; Kass, R; Pulliam, T; Rahimi, A M; Ter-Antonian, R; Wong, Q K; Brau, J E; Frey, R; Igonkina, O; Lu, M; Potter, C T; Sinev, N B; Strom, D; Torrence, E; Colecchia, F; Dorigo, A; Galeazzi, F; Margoni, M; Morandin, M; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Voci, C; Benayoun, M; Briand, H; Chauveau, J; David, P; Del Buono, L; La Vaissière, C de; Hamon, O; John, M J J; Leruste, P; Malcles, J; Ocariz, J; Roos, L; Therin, G; Behera, P K; Gladney, L; Guo, Q H; Panetta, J; Biasini, M; Covarelli, R; Pacetti, S; Pioppi, M; Angelini, C; Batignani, G; Bettarini, S; Bucci, F; Calderini, G; Carpinelli, M; Cenci, R; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Morganti, M; Neri, N; Paoloni, E; Rama, M; Rizzo, G; Walsh, J; Haire, M; Judd, D; Paick, K; Wagoner, D E; Biesiada, J; Danielson, N; Elmer, P; Lau, Y P; Lü, C; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; D'Orazio, A; Di, E; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Piredda, G; Polci, F; Safai-Tehrani, F; Voena, C; Schröder, H; Wagner, G; Waldi, R; Adye, T; De, N; Groot, M; Franek, B; Gopal, G P; Olaiya, E O; Wilson, F F; Aleksan, Roy; Emery, S; Gaidot, A; Ganzhur, S F; Giraud, P F; Graziani, G; Hamel de Monchenault, G; Kozanecki, Witold; Legendre, M; London, G W; Mayer, B; Vasseur, G; Yéche, C; Zito, M; Purohit, M V; Weidemann, A W; Wilson, J R; Yumiceva, F X; Abe, T; Allen, M T; Aston, D; Bartoldus, R; Berger, N; Boyarski, A M; Buchmüller, O L; Claus, R; Convery, M R; Cristinziani, M; Dingfelder, J C; Dong, D; Dorfan, J; Dujmic, D; Dunwoodie, W M; Fan, S; Field, R C; Glanzman, T; Gowdy, S J; Hadig, T; Halyo, V; Hast, C; Hrynóva, T; Innes, W R; Kelsey, M H; Kim, P; Kocian, M L; Leith, D W G S; Libby, J; Luitz, S; Lüth, V; Lynch, H L; Marsiske, H; Messner, R; Müller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Snyder, A; Stelzer, J; Strube, J; Su, D; Sullivan, M K; Suzuki, K; Swain, S; Thompson, J M; Vavra, J; Weaver, M; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Yi, K; Young, C C; Burchat, Patricia R; Edwards, A J; Majewski, S A; Petersen, B A; Roat, C; Ahmed, M; Ahmed, S; Alam, M S; Ernst, J A; Saeed, M A; Saleem, M; Wappler, F R; Zain, S B; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Ritchie, J L; Satpathy, A; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Bóna, M; Gallo, F; Gamba, D; Bomben, M; Bosisio, L; Cartaro, C; Cossutti, F; Della, G; Ricca; Dittongo, S; Grancagnolo, S; Lanceri, L; Poropat, P; Vitale, L; Martínez-Vidal, F; Panvini, R S; Banerjee, S; Bhuyan, B; Brown, C M; Fortin, D; Hamano, K; Kowalewski, R V; Roney, J M; Sobie, R J; Back, J J; Harrison, P F; Latham, T E; Mohanty, G B; Band, H R; Chen, X; Cheng, B; Dasu, S; Datta, M; Eichenbaum, A M; Flood, K T; Graham, M; Hollar, J J; Johnson, J R; Kutter, P E; Li, H; Liu, R; Mellado, B; Mihályi, A; Pan, Y; Prepost, R; Tan, P; Von Wimmersperg-Töller, J H; Wu, J; Wu, S L; Yu, Z; Greene, M G; Neal, H

    2005-01-01

    We report the observation of the decay $B^- \\to D_{\\pi^+\\pi^-\\pi^0} K^-$, where $D_{\\pi^+\\pi^-\\pi^0}$ indicates a neutral $D$ meson detected in the final state $\\pi^+\\pi^-\\pi^0$, excluding $K_S \\pi^0$. This doubly Cabibbo-suppressed decay chain can be used to measure the CKM phase $\\gamma$. Using about 229 million $e^+e^- \\to B \\bar B$ events recorded by the BaBar experiment at the PEP-II $e^+e^-$ storage ring, we measure the branching fraction ${\\cal B}(B^- \\to D_{\\pi^+\\pi^-\\pi^0} K^-) = (5.5 \\pm 1.0 {\\rm(stat.)} \\pm 0.7 {\\rm(syst.)})\\times 10^{-6}$ and the decay rate asymmetry $A = 0.02 \\pm 0.16 {\\rm(stat.)} \\pm 0.03 {\\rm(syst.)}$ for the full decay chain.

  16. From Weakly to Strongly Magnetized Isotropic MHD Turbulence

    CERN Document Server

    Alexakis, Alexandros

    2012-01-01

    High Reynolds number isotropic magneto-hydro-dynamic turbulence in the presence of large scale magnetic fields is investigated as a function of the magnetic field strength. For a variety of flow configurations the energy dissipation rate \\epsilon, follows the Kolmogorov scaling \\epsilon ~ U^3/L even when the large scale magnetic field energy is twenty times larger than the kinetic. Further increase of the magnetic energy showed a transition to the \\epsilon ~ U^2 B / L scaling implying that magnetic shear becomes more efficient at this point at cascading the energy than the velocity fluctuations. Strongly helical configurations form helicity condensates that deviate from these scalings. Weak turbulence scaling was absent from the investigation. Finally, the magnetic energy spectra showed support for the Kolmogorov spectrum k^{-5/3} while kinetic energy spectra are closer to the Iroshnikov-Kraichnan spectrum k^{-3/2}.

  17. Dicty_cDB: SFK591 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available SF (Link to library) SFK591 (Link to dictyBase) - - - - SFK591P (Link to Original site) SFK591F 571 SF...K591Z 720 SFK591P 1291 - - Show SFK591 Library SF (Link to library) Clone ID SFK591 (Link... to dictyBase) Atlas ID - NBRP ID - dictyBase ID - Link to Contig - Original site URL http://dictycdb.biol.tsukuba.ac.jp/CSM/SF/SF...K5-D/SFK591Q.Seq.d/ Representative seq. ID SFK591P (Link to... Original site) Representative DNA sequence >SFK591 (SFK591Q) /CSM/SF/SFK5-D/SFK591Q.Seq.d/ ATATTTATAATTATAT

  18. Synthesis and antioxidant activity of thymol and carvacrol based Schiff bases.

    Science.gov (United States)

    Beena; Kumar, Deepak; Rawat, Diwan S

    2013-02-01

    Thymol and carvacrol are well known antioxidants found in the extract of the plants of thyme species. The Schiff bases of 2-iso-propyl-5-methyl-phenol (thymol/1a), 2-tert-butyl-5-methyl-phenol (1b) and 5-iso-propyl-2-methyl-phenol (carvacrol/1c) exhibited much better antioxidant activity than thymol and carvacrol in DPPH assay. Ten compounds (4k, 4l, 4r, 5k, 5l, 5q, 5r, 6k, 6l and 6r) showed better or similar activity as compared to the reference compound ascorbic acid. Twenty-four most active compounds were also screened by ABTS method and showed 60-90% inhibition at 5 μg/mL concentration.

  19. Complexation of Bi{sup 3+}, Ac{sup 3+}, Y{sup 3+}, Lu{sup 3+}, La{sup 3+} and Eu{sup 3+} with benzo-diaza-crown ether with carboxylic pendant arms

    Energy Technology Data Exchange (ETDEWEB)

    Egorova, Bayirta V. [Lomonosov Moscow State Univ., Moscow (Russian Federation). Chemistry Dept.; Oshchepkov, Maxim S.; Fedorova, Olga A. [Mendeleev University of Chemistry and Technology of Russia, Moscow (Russian Federation); Russian Academy of Sciences, Moscow (Russian Federation). A.N. Nesmeyanov Institute of Organoelement Compounds; Fedorov, Yury V. [Lomonosov Moscow State Univ., Moscow (Russian Federation). Chemistry Dept.; Russian Academy of Sciences, Moscow (Russian Federation). A.N. Nesmeyanov Institute of Organoelement Compounds; Budylin, Gleb S.; Shirshin, Evgeny A. [Lomonosov Moscow State Univ., Moscow (Russian Federation). Dept. of Physics; Kalmykov, Stepan N. [Lomonosov Moscow State Univ., Moscow (Russian Federation). Chemistry Dept.; National Research Center ' Kurchatov Institute' , Moscow (Russian Federation)

    2016-11-01

    Polyaminopolycarboxylates are attractive ligands for binding cationic radionuclides for synthesis of radiopharmaceuticals with target delivery to tumor cells. Nowadays beta emitting Y-90 and Lu-177 are used as therapeutic agents, while Ac-225 and Bi-213 are considered as perspective for alpha therapy. In the present study new data on complexation of Y{sup 3+}, Lu{sup 3+}, Ac{sup 3+} and Bi{sup 3+} with 2,2'-(15-formyl-2,3,5,6,8,9,11,12-octahydrobenzo [b][1,4,10,7,13]trioxadiazacyclopentadecine-4,10- diyl)diacetic acid are presented. For ligand and complexes characterization potentiometric titration, solvent extraction, chromatography and solubility techniques were applied. The highest values of stability constants within the range of log K = 5.8 - 7.5 were found for Ac{sup 3+} and REE. Fast complex formation is established which is beneficial for practical applications in radiopharmaceutical synthesis.

  20. Magnetic and structural characterization of the 2D XY-ferromagnet Rb2CrCl2I2 (abstract)

    Science.gov (United States)

    Visser, D.; Bramwell, S. T.; Kremer, R. K.

    1991-04-01

    Rb2CrCl2I2 crystallizes with a Jahn-Teller deformed K2NiF4 structure. This results in a ferromagnetic behavior for this compound. Rb2CrCl2I2 orders ferromagnetically at Tc=56.9(2) K. Magnetization and magnetic susceptibility measurements, using a vibrating sample magnetometer, Faraday balance, and SQUID magnetometer, on polycrystalline samples were used for the magnetic characterization. Rb2CrCl2I2 shows a Curie-Weiss behavior between 150 and 300 K. The intraplanar superexchange constant J/k=5.8 K. The intra- and interplanar anisotropy have been obtained from the magnetization curves at 4.2 K and are estimated at Hintra=0.16(2) T and Hinter=4.5(2) T.

  1. CSI: Dognapping workshop : an outreach experiment designed to produce students that are hooked on science.

    Energy Technology Data Exchange (ETDEWEB)

    Boyle, Timothy J.; Gorman, Anna K.; Pratt, Harry D., III; Hernandez-Sanchez, Bernadette A.; Lambert, Timothy N.; Ottley, Leigh Anna M.; Baros, Christina Marie

    2008-04-01

    The CSI: Dognapping Workshop is a culmination of the more than 65 Sandian staff and intern volunteers dedication to exciting and encouraging the next generation of scientific leaders. This 2 hour workshop used a 'theatrical play' and 'hands on' activities that was fun, exciting and challenging for 3rd-5th graders while meeting science curriculum standards. In addition, new pedagogical methods were developed in order to introduce nanotechnology to the public. Survey analysis indicated that the workshop had an overall improvement and positive impact on helping the students to understand concepts from materials science and chemistry as well as increased our interaction with the K-5 community. Anecdotal analyses showed that this simple exercise will have far reaching impact with the results necessary to maintain the United States as the scientific leader in the world. This experience led to the initiation of over 100 Official Junior Scientists.

  2. Mutually independent cascades in anisotropic soap-film turbulence

    Science.gov (United States)

    Liu, Chien-Chia; Gioia, Gustavo; Chakraborty, Pinaki

    2015-03-01

    Computational, experimental and field data amassed to date indicate that in 2D turbulence the spectrum of longitudinal velocity fluctuations, E11 (k1) , and the spectrum of transverse velocity fluctuations, E22 (k1) , correspond always to the same cascade, consistent with isotropy, so that E11 (k1) ~k-α and E22 (k1) ~k-α , where the ``spectral exponent'' α is either 5/3 (for the inverse-energy cascade) or 3 (for the enstrophy cascade). Here, we carry out experiments on turbulent 2D soap-film flows in which E11 (k1) ~k - 5 / 3 and E22 (k1) ~k-3 , as if two mutually independent cascades were concurrently active within the same flow. To our knowledge, this species of spectrum has never been observed or predicted theoretically. Our finding might open up new vistas in the understanding of turbulence.

  3. Selective oxidation of lignocellulosic biomass to formic acid and high-grade cellulose using tailor-made polyoxometalate catalysts.

    Science.gov (United States)

    Albert, Jakob

    2017-06-27

    The main goal of this project was to identify and optimize tailor-made polyoxometalate catalysts for a fractionated oxidation of lignocellulosic biomass (i.e. wood and residues from sugar or paper industries) to produce formic acid (FA) and high-grade cellulose for further processing e.g. in white biotechnology to provide bio-ethanol. Homogeneous vanadium precursors like sodium metavanadate and vanadyl sulfate as well as Keggin-type polyoxometalates (POMs) and more exotic structures like Anderson-, Wells-Dawson- and Lindqvist-type POMs were screened for the desired catalytic performance. The most promising behaviour was found using the Lindqvist-type POM K5V3W3O19, showing for the first time in the literature a selective oxidation of only hemicellulose and lignin to formic acid, while the cellulose fraction was untrapped. However, this can only be a first step towards the project goal as low product yields were obtained.

  4. Novel, broad-spectrum anticonvulsants containing a sulfamide group: advancement of N-((benzo[b]thien-3-yl)methyl)sulfamide (JNJ-26990990) into human clinical studies.

    Science.gov (United States)

    Parker, Michael H; Smith-Swintosky, Virginia L; McComsey, David F; Huang, Yifang; Brenneman, Douglas; Klein, Brian; Malatynska, Ewa; White, H Steve; Milewski, Michael E; Herb, Mark; Finley, Michael F A; Liu, Yi; Lubin, Mary Lou; Qin, Ning; Iannucci, Robert; Leclercq, Laurent; Cuyckens, Filip; Reitz, Allen B; Maryanoff, Bruce E

    2009-12-10

    In seeking broad-spectrum anticonvulsants to treat epilepsy and other neurological disorders, we synthesized and tested a group of sulfamide derivatives (4a-k, 5), which led to the clinical development of 4a (JNJ-26990990). This compound exhibited excellent anticonvulsant activity in rodents against audiogenic, electrically induced, and chemically induced seizures, with very weak inhibition of human carbonic anhydrase-II (IC(50) = 110 microM). The pharmacological profile for 4a supports its potential in the treatment of multiple forms of epilepsy, including pharmacoresistant variants. Mechanistically, 4a inhibited voltage-gated Na(+) channels and N-type Ca(2+) channels but was not effective as a K(+) channel opener. The pharmacokinetics and metabolic properties of 4a are discussed.

  5. A kinetic study of the electron-transfer in the reaction of tribenzylchlorotin with [COW12O40]5-

    Institute of Scientific and Technical Information of China (English)

    Fatemeh F. Bamoharram; Mohammad M. Heravi; Touran Ardalan; Pouran Ardalan

    2009-01-01

    A kinetic study of the electron-transfer in the reaction of tribenzylchlorotin with potassium 12-tungsto cobalt (Ⅲ) ate ion, K5[CoW12O40], abbreviated as Co(Ⅲ)W, has been performed in different solvents. The studies were carried out in methanol, ethanol, acetonitrile and acetic acid/water. The rate constants, reaction rates and activation parameters were calculated. Our findings show that the rate of disappearance of the Co(Ⅲ) is pseudo-first order. The kinetic data is strongly affected by used solvents. The maximum and minimum rate constants were achieved in the ethanol and acetic acid/water (70/30) as a solvent, respectively. In all of the used solvents, negative value of activation entropies was observed, but negative activation enthalpies are observed in methanol, ethanol and acetonitrile. The reaction rate is increased with increase of Co(Ⅲ) concentration.

  6. Niederenergetische Gammalinien vom Neutroneneinfang in Lu 175 und Lu 176

    DEFF Research Database (Denmark)

    Maier, Bernd P. K.

    1965-01-01

    : 121,62 keV (I=9/2), 268,79keV (I=11/2), 440,66 keV (I=13/2), 636,22 keV (I=15/2), 854,34 keV (I=17/2). The level-sequence of the (514)K=9/2−-band is: 150,39 keV (I=9/2), 288,99 keV (I=11/2), 451,49 keV (I=13/2), 637,05 keV (I=15/2) and 844,88 keV (I=17/2). At 457,92 keV is the basis for the (402)K=5...

  7. Novel dammarane-type triterpenes isolated from hydrolyzate of total Gynostemma pentaphyllum saponins.

    Science.gov (United States)

    Zhang, Xiao-Shu; Cao, Jia-Qing; Zhao, Chen; Wang, Xu-de; Wu, Xiao-jun; Zhao, Yu-Qing

    2015-08-15

    In this study, five novel triterpenes were isolated from hydrolyzate of total saponins from Gynostemma pentaphyllum and identified as gypensapogenin H (1), gypensapogenin I (2), gypensapogenin L (3), gypensapogenin J (4) and gypensapogenin K (5), three of which (1-3) possess unprecedented ring A. All the isolated compounds were evaluated for cytotoxic activities in five cell lines and all the tested compounds showed significant anti-cancer activities against a series of human cancer cell lines, while having much weaker effect on the growth of normal cell. Among them, compound 1 showed strong inhibition toward MCF-7 human breast cancer cells (IC50 values 6.85 μM). Further mechanistic study demonstrated that compound 1 significantly induced MCF-7 cell apoptosis. Our results indicated that compound 1 may be a promising lead agent for further study. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Identification of a Gene on Chromosome 18q21 Involved in Suppressing Metastatic Prostate Cancer

    Science.gov (United States)

    2005-12-01

    NEDDL4 843G18 54.0-54.2 42.11% 61J14 54.6-54.7 26.32% MALT1 , ZNF532 890O5 55.0-55.2 31.58% RAX, CMPLX4, LMAN1 888I12 56.3-56.5 47.37% 1061K3...protease inhibitor family and has been found to be down-regulated in breast carcinoma (Zou et al., 1994). Loss of maspin expression has also has...29% MBD2 275K5 53.5-53.7 24% ATP8B1 693L9 53.7-53.9 29% NO KNOWN GENES 718I15 53.8-54 19% NEDD4L 108P20 54.5-54.7 24% MALT1 675P24 54.6-54.8 24

  9. Potentiometric strip cell based on carbon nanotubes as transducer layer: toward low-cost decentralized measurements.

    Science.gov (United States)

    Rius-Ruiz, F Xavier; Crespo, Gastón A; Bejarano-Nosas, Diego; Blondeau, Pascal; Riu, Jordi; Rius, F Xavier

    2011-11-15

    In this study, we developed a potentiometric planar strip cell based on single-walled carbon nanotubes that aims to exploit the attributes of solid-contact ion-selective electrodes for decentralized measurements. That is, the ion-selective and reference electrodes have been simultaneously miniaturized onto a plastic planar substrate by screen-printing and drop-casting techniques, obtaining disposable strip cells with satisfactory performance characteristics (i.e., the sensitivity is 57.4 ± 1.3 mV/dec, the response time is ≤30 s within the linear range from log a(K+) = -5 to -2, and the limit of detection is -6.5), no need of maintenance during long dry storage, quick signal stabilization, and light insensitivity in short-term measurements. We also show how the new potentiometric strip cell makes it possible to perform decentralized and rapid determinations of ions in real samples, such as saliva or beverages.

  10. Observation of B Meson Decays to omegapi+, omegaK+, and omegaK0

    CERN Document Server

    Aubert, Bernard; Boutigny, D; Gaillard, J M; Hicheur, A; Karyotakis, Yu; Lees, J P; Robbe, P; Tisserand, V; Zghiche, A; Palano, A; Pompili, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Borgland, A W; Breon, A B; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Day, C T; Gill, M S; Gritsan, A V; Groysman, Y; Jacobsen, R G; Kadel, R W; Kadyk, J; Kerth, L T; Kolomensky, Yu G; Kral, J F; Kukartsev, G; Le Clerc, C; Levi, M E; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Romosan, A; Ronan, Michael T; Shelkov, V G; Telnov, A V; Wenzel, W A; Harrison, T J; Hawkes, C M; Knowles, D J; Penny, R C; Watson, A T; Watson, N K; Deppermann, T; Goetzen, K; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schmücker, H; Steinke, M; Barlow, N R; Bhimji, W; Boyd, J T; Chevalier, N; Cottingham, W N; MacKay, C; Wilson, F F; Hearty, C; Mattison, T S; McKenna, J A; Thiessen, D; Kyberd, P; McKemey, A K; Blinov, V E; Bukin, A D; Golubev, V B; Ivanchenko, V N; Kravchenko, E A; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Yushkov, A N; Best, D; Chao, M; Kirkby, D; Lankford, A J; Mandelkern, M A; McMahon, S; Mommsen, R K; Röthel, W; Stoker, D P; Buchanan, C; Hadavand, H K; Hill, E J; MacFarlane, D B; Paar, H P; Rahatlou, S; Schwanke, U; Sharma, V; Berryhill, J W; Campagnari, C; Dahmes, B; Kuznetsova, N; Levy, S L; Long, O; Lu, A; Mazur, M A; Richman, J D; Verkerke, W; Beringer, J; Eisner, A M; Heusch, C A; Lockman, W S; Schalk, T; Schmitz, R E; Schumm, B A; Seiden, A; Turri, M; Walkowiak, W; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dorsten, M P; Dubois-Felsmann, G P; Dvoretskii, A; Hitlin, D G; Narsky, I; Porter, F C; Ryd, A; Samuel, A; Yang, S; Jayatilleke, S M; Mancinelli, G; Meadows, B T; Sokoloff, M D; Barillari, T; Blanc, F; Bloom, P; Clark, P J; Ford, W T; Nauenberg, U; Olivas, A; Rankin, P; Roy, J; Smith, J G; Van Hoek, W C; Zhang, L; Harton, J L; Hu, T; Soffer, A; Toki, W H; Wilson, R J; Zhang, J; Altenburg, D; Brandt, T; Brose, J; Colberg, T; Dickopp, M; Dubitzky, R S; Hauke, A; Lacker, H M; Maly, E; Müller-Pfefferkorn, R; Nogowski, R; Otto, S; Schubert, Klaus R; Schwierz, R; Spaan, B; Wilden, L; Bernard, D; Bonneaud, G R; Brochard, F; Cohen-Tanugi, J; Thiebaux, C; Vasileiadis, G; Verderi, M; Khan, A; Lavin, D; Muheim, F; Playfer, S; Swain, J E; Tinslay, J; Bozzi, C; Piemontese, L; Sarti, A; Treadwell, E; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; De Sangro, R; Falciai, D; Finocchiaro, G; Patteri, P; Peruzzi, I M; Piccolo, M; Zallo, A; Buzzo, A; Contri, R; Crosetti, G; Lo Vetere, M; Macri, M; Monge, M R; Passaggio, S; Pastore, F C; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Bailey, S; Morii, M; Grenier, G J; Lee, S J; Mallik, U; Cochran, J; Crawley, H B; Lamsa, J; Meyer, W T; Prell, S; Rosenberg, E I; Yi, J; Davier, M; Grosdidier, G; Höcker, A; Laplace, S; Le Diberder, F R; Lepeltier, V; Lutz, A M; Petersen, T C; Plaszczynski, S; Schune, M H; Tantot, L; Wormser, G; Bionta, R M; Brigljevic, V; Cheng, C H; Lange, D J; Wright, D M; Bevan, A J; Fry, J R; Gabathuler, Erwin; Gamet, R; Kay, M; Payne, D J; Sloane, R J; Touramanis, C; Aspinwall, M L; Bowerman, D A; Dauncey, P D; Egede, U; Eschrich, I; Morton, G W; Nash, J A; Sanders, P; Taylor, G P; Back, J J; Bellodi, G; Harrison, P F; Shorthouse, H W; Strother, P; Vidal, P B; Cowan, G; Flächer, H U; George, S; Green, M G; Kurup, A; Marker, C E; McMahon, T R; Ricciardi, S; Salvatore, F; Vaitsas, G; Winter, M A; Brown, D; Davis, C L; Allison, J; Barlow, R J; Forti, A C; Hart, P A; Jackson, F; Lafferty, G D; Lyon, A J; Weatherall, J H; Williams, J C; Farbin, A; Jawahery, A; Kovalskyi, D; Lae, C K; Lillard, V; Roberts, D A; Blaylock, G; Dallapiccola, C; Flood, K T; Hertzbach, S S; Kofler, R; Koptchev, V B; Moore, T B; Stängle, H; Willocq, S; Cowan, R; Sciolla, G; Taylor, F; Yamamoto, R K; Mangeol, D J J; Milek, M; Patel, P M; Lazzaro, A; Palombo, F; Bauer, J M; Cremaldi, L M; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Hast, C; Taras, P; Nicholson, H; Cartaro, C; Cavallo, N; De Nardo, Gallieno; Fabozzi, F; Gatto, C; Lista, L; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M A; Raven, G; LoSecco, J M; Gabriel, T A; Brau, B; Pulliam, T; Brau, J E; Frey, R; Iwasaki, M; Potter, C T; Sinev, N B; Strom, D; Torrence, E; Colecchia, F; Dorigo, A; Galeazzi, F; Margoni, M; Morandin, M; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Tiozzo, G; Voci, C; Benayoun, M; Briand, H; Chauveau, J; David, P; La Vaissière, C de; Del Buono, L; Hamon, O; Leruste, P; Ocariz, J; Pivk, M; Roos, L; Stark, J; T'Jampens, S; Manfredi, P F; Re, V; Gladney, L; Guo, Q H; Panetta, J; Angelini, C; Batignani, G; Bettarini, S; Bondioli, M; Bucci, F; Calderini, G; Carpinelli, M; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Martínez-Vidal, F; Morganti, M; Neri, N; Paoloni, E; Rama, M; Rizzo, G; Sandrelli, F; Walsh, J; Haire, M; Judd, D; Paick, K; Wagoner, D E; Danielson, N; Elmer, P; Lü, C; Miftakov, V; Olsen, J; Smith, A J S; Varnes, E W; Bellini, F; Cavoto, G; Del Re, D; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Leonardi, E; Mazzoni, M A; Morganti, S; Pierini, M; Piredda, G; Safai-Tehrani, F; Serra, M; Voena, C; Christ, S; Wagner, G; Waldi, R; Adye, T; De Groot, N; Franek, B J; Geddes, N I; Gopal, G P; Olaiya, E O; Xella, S M; Aleksan, Roy; Emery, S; Gaidot, A; Ganzhur, S F; Giraud, P F; Hamel de Monchenault, G; Kozanecki, Witold; Langer, M; London, G W; Mayer, B; Schott, G; Vasseur, G; Yéche, C; Zito, M; Purohit, M V; Weidemann, A W; Yumiceva, F X; Aston, D; Bartoldus, R; Berger, N; Boyarski, A M; Buchmüller, O L; Convery, M R; Coupal, D P; Dong, D; Dorfan, J; Dujmic, D; Dunwoodie, W M; Field, R C; Glanzman, T; Gowdy, S J; Graugès-Pous, E; Hadig, T; Halyo, V; Hrynóva, T; Innes, W R; Jessop, C P; Kelsey, M H; Kim, P; Kocian, M L; Langenegger, U; Leith, D W G S; Luitz, S; Lüth, V; Lynch, H L; Marsiske, H; Menke, S; Messner, R; Müller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Petrak, S; Ratcliff, B N; Robertson, S H; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Simi, G; Snyder, A; Soha, A; Stelzer, J; Su, D; Sullivan, M K; Tanaka, H A; Vavra, J; Wagner, S R; Weaver, M; Weinstein, A J R; Wisniewski, W J; Wright, D H; Young, C C; Burchat, Patricia R; Meyer, T I; Roat, C; Ahmed, S; Ernst, J A; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Kim, H; Ritchie, J L; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Bóna, M; Gallo, F; Gamba, D; Borean, C; Bosisio, L; Della Ricca, G; Dittongo, S; Grancagnolo, S; Lanceri, L; Poropat, P; Vitale, L; Vuagnin, G; Panvini, R S; Banerjee, Sw; Brown, C M; Fortin, D; Jackson, P D; Kowalewski, R V; Roney, J M; Band, H R; Dasu, S; Datta, M; Eichenbaum, A M; Hu, H; Johnson, J R; Liu, R; Di Lodovico, F; Mohapatra, A K; Pan, Y; Prepost, R; Sekula, S J; Von Wimmersperg-Töller, J H; Wu, J; Wu Sau Lan; Yu, Z; Neal, H

    2003-01-01

    We present preliminary measurements of B meson decays to omegapi+, omegaK+, and omegaK0. The data were recorded with the BABAR detector and correspond to 88.9x10^6 BBbar pairs produced in e+e- annihilation at the Upsilon(4S) resonance. We find statistically significant signals for all three channels: B(B->omegapi+)=(5.4+/-1.0+/-0.5)x10^-6, B(B->omegaK+)=(5.0+/ -1.0+/-0.4)x10^-6, and B(B->omegaK0)=(5.3^+1.4_-1.2+/-0.5)x10^-6. We also measure time-integrated charge asymmetries A_ch(omegapi+)=0.04+/-0.17+/-0.0 1 and A_ch(omegaK+)=-0.05+/-0.16+/-0.01.

  11. Possible explanation of the atmospheric kinetic and potential energy spectra.

    Science.gov (United States)

    Vallgren, Andreas; Deusebio, Enrico; Lindborg, Erik

    2011-12-23

    We hypothesize that the observed wave number spectra of kinetic and potential energy in the atmosphere can be explained by assuming that there are two related cascade processes emanating from the same large-scale energy source, a downscale cascade of potential enstrophy, giving rise to the k(-3) spectrum at synoptic scales and a downscale energy cascade giving rise to the k(-5/3) spectrum at mesoscales. The amount of energy which is going into the downscale energy cascade is determined by the rate of system rotation, with negligible energy going downscale in the limit of very fast rotation. We present a set of simulations of a system with strong rotation and stratification, supporting these hypotheses and showing good agreement with observations.

  12. A novel chemiluminescence assay of mitoxantrone based on diperiodatocuprate(III) oxidation

    Science.gov (United States)

    Yao, Hanchun; Zhang, Min; Zeng, Wenyuan; Zeng, Xiaoying; Zhang, Zhenzhong

    2014-01-01

    A novel and strong chemiluminescence (CL) of luminol with diperiodatocuprate (K5[Cu(HIO6)2]) was observed in alkaline medium. After the addition of mitoxantrone (MTX) into this system, the CL intensity could be greatly inhibited by MTX. Based on the phenomenon, a sensitive CL method was established for analysis of MTX combining with flow injection technology. Under optimum experimental conditions, the CL intensity was linearly related to the logarithm concentration of MTX from 5.0 × 10-9-1.0 × 10-7 g/ml with the detection limit of 1.1 × 10-9 g/ml (S/N = 3). The relative standard deviation was 1.2% for 5.0 × 10-8 g/ml of MTX. The proposed method was successfully applied for determination of MTX in pharmaceutical preparations and biological fluids. The possible CL reaction mechanism was also discussed briefly.

  13. Genetic diversity of serotype A foot-and-mouth disease viruses in Kenya from 1964 to 2013; implications for control strategies in eastern Africa

    DEFF Research Database (Denmark)

    Wekesa, Sabenzia N.; Sangula, Abraham K.; Belsham, Graham

    2014-01-01

    (K5/1980 and K35/1980) and previous use of two other strains (K18/66 and K179/71). This study aimed at enhancing the understanding of the patterns of genetic variation of serotype A FMDV in Kenya. The complete VP1 coding region sequences of 38 field isolates, identified as serotype A FMDV, collected......Serotype A is the most genetically and antigenically diverse of the foot-and-mouth disease virus (FMDV) serotypes. Records of its occurrence in Kenya date back to 1952 and the antigenic diversity of the outbreak viruses in this region is reflected by the current use of two different vaccine strains...... between 1964 and 2013 were determined. Coalescent-based methods were used to infer times of divergence of the virus strains and the evolutionary rates alongside 27 other serotype A FMDV sequences from Genbank and the World Reference Laboratory (WRL). This study represents the first comprehensive genetic...

  14. Compressible turbulent mixing: Effects of Schmidt number

    CERN Document Server

    Ni, Qionglin

    2015-01-01

    We investigated the effects of Schmidt number on passive scalar transport in forced compressible turbulence. In the inertial-convective range the scalar spectrum followed the k^{-5/3} power law. For Sc >> 1, there appeared a k^{-1} power law in the viscous-convective range, while for Sc > 1, the scalar field rolled up and got mixed sufficiently. However, for Sc > 1 and Sc > 1 and Sc << 1 flows decayed faster than the theoretical prediction of k^{-2/3} for incompressible flows. Finally, the comparison with incompressible results showed that the scalar in compressible turbulence with Sc=1 lacked a conspicuous bump structure in its spectrum, but was more intermittent in the dissipative range.

  15. Structure and affinity of two bicyclic glutamate analogues at AMPA and kainate receptors

    DEFF Research Database (Denmark)

    Møllerud, Stine; Pinto, Andrea; Marconi, Laura

    2017-01-01

    and depression. In order to understand the function of different types of iGluRs, selective agonists are invaluable as pharmacological tool compounds. Here, we report binding affinities of two bicyclic, conformationally restricted analogues of glutamate (CIP-AS and LM-12b) at AMPA (GluA2 and GluA3) and kainate...... receptor subunits (GluK1-3 and GluK5). Both CIP-AS and LM-12b were found to be GluK3-preferring agonists, with Ki of 6 and 22 nM, respectively, at recombinant GluK3 receptors. The detailed binding mode of CIP-AS and LM-12b in the ligand-binding domains of the AMPA receptor subunit GluA2 (GluA2-LBD...

  16. Spectroscopy of late type giant stars

    Science.gov (United States)

    Spaenhauer, A.; Thevenin, F.

    1984-06-01

    An attempt to calibrate broadband RGU colors of late type giant stars in terms of the physical parameters of the objects is reported. The parameters comprise the effective temperature, surface gravity and global metal abundance with respect to the sun. A selection of 21 giant star candidates in the Basel fields Plaut 1, Centaurus III and near HD 95540 were examined to obtain a two color plot. Attention is focused on the G-R color range 1.5-2.15 mag, i.e., spectral types K0-K5. A relationship between R and the metallicity is quantified and shown to have a correlation coefficient of 0.93. No correlation is found between metallicity and gravity or R and the effective temperature.

  17. Dollar Summary of Prime Contract Awards by Contractor, State or Country, and Place, FY 85. Part 4 (Metro/Egida - Seattle University).

    Science.gov (United States)

    1985-01-01

    1-4 cc-~~ I u- 0 CL 00W (A U- 0 0 1. ClSI . - UI- l’ 1 0 1.- 0 0005 I~~~~ ~~~~~~~ *1 &I- &I’-. a a’- W4 ~ 41 4 C 1 a ’’ ~ 4 -K5U~ 4 - c -4-c .4U -C -w...8217a*i r. ).. 0 U c.. III 0 CCC- 0 - v o 0 0 -C I th 0- >WUU us0c -Aa- I- _* I C" Go. 34 v X- C24 2. h. C% U C 0 𔃾 > Ř ( 1.1 O CI U 0 0- 51 U. *.1

  18. 厂商新闻

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    第七届威盛电子科技论坛拉开帷幕;希捷科技Barracuda 7200.10面世;三星首次向圈内推出四大系列十款耳机;威盛“中国芯”点亮校园文化生活;映泰推出TForce 550主板;PCCHIPS精威P13G上市;麦克赛尔高校原创音乐大赛;双敏6800GS显卡比GT还便宜;希捷发布新款Cheetah 15K.5硬盘。

  19. Origin of the inverse energy cascade in two-dimensional quantum turbulence

    CERN Document Server

    Skaugen, Audun

    2016-01-01

    We unravel the intimate connection between fundamental characteristics of two dimensional turbulence, i.e. the large-scale coherent structures and the inverse energy cascade. We propose a driven, dissipative point vortex model that is able to capture the dynamics of two-dimensional quantum turbulence by the emergent clustering of same-sign vortices, which form a non-equilibrium analogue of Onsager vortex equilibria. The inverse energy cascade developing in a statistically neutral system originates from this clustering of co-rotating and counter-rotating vortices. The Kolmogorov energy spectrum $k^{-5/3}$ is attributed to the scale-free correlations in the vorticity field fluctuations, here measured by the weighted pair correlation function that has a power-law decay as $r^{-4/3}$ on inertial separation lengthscales $r$. This scale-invariant statistics of vorticity, attributed to a conformal symmetry of two-dimensional classical turbulence, draws further analogies between classical and quantum turbulence beyon...

  20. Reaction Engineering of Biocatalytic Enantioselective Reduction: A Case Study for Aliphatic Ketones

    DEFF Research Database (Denmark)

    Leuchs, Susanne; Lima-Ramos, Joana; Greiner, Lasse

    2013-01-01

    Previously, it could be demonstrated, that the monophasic, enzymatic reduction of aliphatic 2-ketones into the corresponding (R)-2-alcohols is an adequate and viable method as carried out in a cascade of two enzyme–membrane reactors (Leuchs, S.; Na’amnieh, S. N.; Greiner, L. Green Chemistry 2013......, 15, 167–176.). In the present work, the process metrics of the ketone reduction were calculated. A cost analysis revealed that the enzyme costs are negligible, but the cost for nicotinamide cofactor NADP+ is dominating the overall cost of the chemical raw material followed by the ionic liquid (TEGO...... IL K5) used as solubiliser and the buffer. The overall cost of chemicals was €148/kgproduct. To assess the environmental impact of the process, the E-factor (kgwaste/kgproduct) 132 and the process mass intensity 133 (PMI, kgsubstrate/kgproduct) were calculated. A process model based on initial rate...

  1. The Relationship between Trehalose Content and Ethanol Tolerance in High Ethanol Tolerant Yeast and Ethanol Sensitive Yeast%耐高浓度酒精酵母菌与酒精敏感酵母菌中海藻糖含量与耐酒精的关系

    Institute of Scientific and Technical Information of China (English)

    高峻; 池振明

    2001-01-01

    对存在葡萄糖和无葡萄糖存在情况下的耐酒精酵母菌Saccharomyces cerevisiae 1200 菌株和酒精敏感酵母菌Saccharomyces cerevisiae K5-5A菌株的耐酒精能力进行了比较.同时分析了它们在高浓度酒精冲击过程中的海藻糖含量变化.结果发现,这2株酒精酵母菌的海藻糖含量与它们的耐酒精能力、保护线粒体膜完整性、防止线粒体丢失DNA有很大的关系.

  2. Dicty_cDB: Contig-U08762-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 32 0.18 12 ( AC105153 ) Mus musculus chromosome 17, clone RP24-376L20, co... 50 0.18 1 ( AC099597 ) Mus musc...ulus chromosome 17, clone RP23-78K9, comp... 50 0.18 1 ( AC194990 ) Pan troglodytes BAC clone CH251-551K5 from chromo...... 50 0.18 1 ( AL031116 ) Human DNA sequence from clone RP5-878O8 on chromo... 50 0.18 1 ( AC13277...1 ( BX470084 ) Mouse DNA sequence from clone RP23-239A15 on chro... 48 0.71 1 ( AC160124 ) Mus musculus BAC ...E Sequences producing significant alignments: (bits) Value AC116305_99( AC116305 |pid:none) Dictyostelium discoideum chromoso...

  3. Antioxidative Activity of Tobacco Leaf Protein Hydrolysates

    Directory of Open Access Journals (Sweden)

    Guohua Rao

    2007-01-01

    Full Text Available Discarded tobacco leaf protein hydrolysate (DTLPH was prepared by enzymatic hydrolysis using papain and then separated using ultrafiltration (UF membranes with molecular mass cut-off (MMCO of 10, 5, 3 and 1 kDa. Four permeate fractions including 10-K, 5-K, 3-K and 1-K (the permeate fractions from 10, 5, 3 and 1 kDa hydrolysate fractions were obtained. The 5-K hydrolysate fraction had high oxidation inhibilitory ratio (42.62 %, which was about twofold higher than the original hydrolysate and as high as that of vitamin E (α-tocopherol. The fractionated hydrolysates were superior to the original hydrolysate in the antioxidative activity tested. Moreover, these separated hydrolysates showed the enhanced functional property. The amino acid composition of 5-K hydrolysate was analyzed and the results show that the high antioxidative activity of 5-K hydrolysate was derived from high content of histidine, methionine, cystine and tryptophan.

  4. In vitro susceptibility of Paracoccidioides brasiliensis yeast form to antifungal agents

    Directory of Open Access Journals (Sweden)

    Angela Restrepo

    1984-12-01

    Full Text Available A study was conducted to determine the susceptibility of P. brasiliensis yeast form to amphotericin B (A, ketoconazole (K, 5-fluorocytosine (5-FC and rifampin (R. The three isolates tested produced minimal inhibitory concentrations (MICs (mcg/ml in the following range: A: 0.09-0.18; K: 0.001-0.007; 5-FC: 62.5-250 and R: 40-80. The minimal fungicidal concentrations (MFC were several times higher than the corresponding MICs. Precise MFC for 5-FC were not obtained (> 500 mcg/ml. Combination of K plus A proved synergic, with the fractional inhibitory concentration (FIC indices revealing synergy when the drugs were combined at the 1 to 1 and 1 to 5 MIC ratios. R (40 mcg/ml appeared to antagonize K. These results indicate promise for the combined use of K plus A as a therapeutical regimen.

  5. Starspots on LO Pegasi, 2006-2015

    Science.gov (United States)

    Harmon, Robert O.; Chalmers, Mark; Geda, Robel; Henry, Brandi; Sliupas, Viesulas

    2016-01-01

    LO Pegasi is a rapidly rotating (P = 10.154 hr) young solar analog (spectral class K5-7V) variable star of BY Dra type that exhibits dark starspots on its surface that modulate its brightness as they are carried into and out of view by the star's rotation. Surface maps of the spot distribution were produced based on BVRI photometry obtained at Perkins Observatory from 2006-2015. The maps were generated from the light curves via a non-linear inversion algorithm that uses the differences in the limb darkening through different filter passbands to improve the latitude resolution of the maps. We present an analysis of variations in the size of a polar spot suggested by changes in the average brightness and the amplitude of the rotational modulation from year to year.

  6. A small-scale dynamo in feedback-dominated galaxies as the origin of cosmic magnetic fields. I-the kinematic phase

    CERN Document Server

    Rieder, Michael

    2015-01-01

    Astrophysical dynamo theories provide various mechanisms for magnetic field amplification inside galaxies, where weak initial fields grow exponentially on various timescales. We investigate the particular role played by stellar feedback mechanisms in creating strong fluid turbulence, allowing for a magnetic dynamo to emerge. Performing magnetohydrodynamic simulations of isolated cooling halos, for both dwarf and Milky Way sized objects, we compare the magnetic field evolution for various initial field topologies and various stellar feedback mechanisms. We find that feedback can indeed drive strong gas turbulence which gives rise to a fast exponential magnetic field growth. Our simulations feature typical properties of Kolmogorov turbulence with a $k ^{-5/3}$ kinetic energy spectrum, as well as the characteristic properties of a small-scale dynamo, with a $k^{3/2}$ magnetic energy spectrum as predicted by Kazantsev dynamo theory. In these feedback-dominated galaxies, stellar feedback provides forcing on large ...

  7. Decomposition of Cellulose to Produce 5-Hydroxymethyl-Furaldehyde in Subcritical Water

    Institute of Scientific and Technical Information of China (English)

    L(U) Huisheng; LI Xiangke; ZHANG Minhua

    2008-01-01

    A method for decomposition of cellulose to produce 5-hydroxymethyl-furaldehyde (5-HMF) in subcritical water-carbon dioxide binary system was proposed. A series of experiments were performed in a batch reaction vessel. Main products of the decomposition of cellulose are 5-HMF, furfural, levulinic acid and 1, 2, 4-benzenetriol. The optimum condition for the preparation of 5-HMF was found as 523.15 K, 5.0% carbon dioxide mole fraction, and 30 min reaction time. The addition of carbon dioxide to water conduced to the decomposition of cellulose to 5-HMF. As can be seen from the distribution of the prod-ucts, the decomposition mechanism of cellulose is similar to the hydrothermal reaction of D-glucose and D-fructose.

  8. Oral ketamine and dexmedetomidine in adults' burns wound dressing--A randomized double blind cross over study.

    Science.gov (United States)

    Kundra, Pankaj; Velayudhan, Savitri; Krishnamachari, Srinivasan; Gupta, Suman Lata

    2013-09-01

    Study was designed to compare analgesic efficacy and side effects of oral dexmedetomidine and ketamine in adults for burn wound dressing. Sixty healthy adults with thermal burns with burn area (20-50%) were randomly assigned into 2 groups. In Group K 5mg/kg ketamine and in Group D 4 mcg/kg dexmedetomidine was given orally. Patients crossed over to the other group the following day. Visual analogue score, sedation score, haemodynamic parameters were recorded from 30min after drug administration to 2h after procedure. Patients' preference was also recorded. Mean VAS score was significantly reduced from baseline in both the groups at all time points (Pdressing. Oral ketamine produced significantly better pain relief than dexmedetomidine but was associated with delirium and excessive salivation.

  9. 3.5英寸硬盘开始采用垂直记录技术

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    硬盘厂商希捷公司最近宣布了转速为41500r/min的新硬盘产品,并计划量产。这一型号为Cheetah 15K.5的3.5英寸规格硬盘,采用最新的垂直记录技术,通过4片磁碟实现最高达300GB的容量。据称,在3.5英寸硬盘中这是首次采用垂直记录技术。而在此前,希捷已将垂直记录技术用于2.5英寸硬盘产品。

  10. JARE Syowa Station 11-m Antenna, Antarctica

    Science.gov (United States)

    Aoyama, Yuichi; Doi, Koichiro; Shibuya, Kazuo

    2013-01-01

    In 2012, the 52nd and the 53rd Japanese Antarctic Research Expeditions (hereinafter, referred to as JARE-52 and JARE-53, respectively) participated in five OHIG sessions - OHIG76, 78, 79, 80, and 81. These data were recorded on hard disks through the K5 terminal. Only the hard disks for the OHIG76 session have been brought back from Syowa Station to Japan, in April 2012, by the icebreaker, Shirase, while those of the other four sessions are scheduled to arrive in April 2013. The data obtained from the OHIG73, 74, 75, and 76 sessions by JARE-52 and JARE-53 have been transferred to the Bonn Correlator via the servers of National Institute of Information and Communications Technology (NICT). At Syowa Station, JARE-53 and JARE-54 will participate in six OHIG sessions in 2013.

  11. Creating a Bio-Inspired Solution to Prevent Erosion

    Science.gov (United States)

    Reher, R.; Martinez, A.; Cola, J.; Frost, D.

    2016-12-01

    Through the study of geophysical sciences, lessons can be developed which allow for the introduction of bio-inspired design and art concepts to K-5 elementary students. Students are placed into an engineering mindset in which they must apply the concepts of bio-geotechnics to observe how we can use nature to prevent and abate erosion. Problems are staged for students using realistic engineering scenarios such as erosion prevention through biomimicry and the study of anchorage characteristics of root structures in regard to stability of soil. Specifically, a lesson is introduced where students research, learn, and present information about bio-inspired designs to understand these concepts. They lean how plant roots differ in size and shape to stabilize soil. In addition, students perform a series of hands-on experiments which demonstrate how bio-cements and roots can slow erosion.

  12. 高温高压下湿空气循环中增湿塔的计算研究%Study on Calculations of Humidification Tower with Humid Air Turbine Cycle at High Temperature and Pressure

    Institute of Scientific and Technical Information of China (English)

    丁皓; 陆小华; 吉晓燕; 秦建华

    2004-01-01

    Humidification is an important step in humid air turbine system. The calculation on humidification is carried out at 423.15-573.15K, 5-15 MPa. The results suggest that to produce high-enthalpy moist air, high water temperature and large water flow are needed. The water temperature is the most sensitive parameter to the humidification tower. And it is better for the humidification tower to work at temperature higher than 523 K when the system pressure is higher than 5 MPa. The comparison between the model used in this paper and ideal model shows that the ideal model can be used in simulation to simply the calculation when the temperature is lower than473 K and pressure is lower than 5 MPa.

  13. Study on Calculations of Humidification Tower with Humid Air Turbine Cycle at High Temperature and Pressure

    Institute of Scientific and Technical Information of China (English)

    丁皓; 陆小华; 吉晓燕; 秦建华

    2004-01-01

    Humidification is an important step in humid air turbine system. The calculation on humidification is carried out at 423.15—573.15K, 5—15MPa. The results suggest that to produce high-enthalpy moist air, high water temperature and large water flow are needed. The water temperature is the most sensitive parameter to the humidification tower. And it is better for the humidification tower to work at temperature higher than 523 K when the system pressure is higher than 5 MPa. The comparison between the model used in this paper and ideal model shows that the ideal model can be used in simulation to simply the calculation when the temperature is lower than 473 K and pressure is lower than 5 MPa.

  14. G328: A Small-Amplitude Red Variable with a Period Near One Day

    Institute of Scientific and Technical Information of China (English)

    Bao-An Yao; Chang-Jun Shen; Chun-Sheng Zhang; Han-Ming Hu; Qing Lin

    2006-01-01

    G328 = A65 = L3314 (V = 13.83, B - V = 1.91) is a field star in the direction of the globular cluster M4. If we take E(B - V) = 0.40, then its (B - V)0 = 1.51,corresponding to a spectral type of K5III if it is a giant star; or of dM2 if it is a dwarf.Observations at both the MSSSO and Yurnan Observatory have shown that G328 is a new variable with peak to peak amplitude (≌) 0.05 mag in V. While it is not unusual for so red a star to be a variable, special attention must be paid to its short period of about one day.If the variability is due to pulsation, the spectral type and luminosity as well as effective temperature should be determined in order to compare it with Xiong's theory.

  15. A Synthesis of Research on Informational Text Reading Interventions for Elementary Students With Learning Disabilities.

    Science.gov (United States)

    Ciullo, Stephen; Lo, Yu-Ling Sabrina; Wanzek, Jeanne; Reed, Deborah K

    2016-01-01

    This research synthesis was conducted to understand the effectiveness of interventions designed to improve learning from informational text for students with learning disabilities in elementary school (K-5). The authors identified 18 studies through a comprehensive search. The interventions were evaluated to determine treatment effects and to understand implementation and methodological variables that influenced outcomes. Moderate to large effect sizes on researcher-developed measures for cognitive strategy interventions were reported. Interventions that utilized graphic organizers as study guides to support social studies learning were also associated with improved outcomes. The findings are considered within the context of limited implementation of standardized measures. The authors extend findings from previous research by reporting a paucity of interventions to enhance higher-level cognitive and comprehension skills. The majority of reviewed studies targeted fact acquisition and main idea identification, and overall encouraging findings were noted for these skills. Implications for future research are discussed.

  16. Anisotropy in Quasi-Static Magnetohydrodynamic Turbulence

    Science.gov (United States)

    Verma, Mahendra K.

    2017-08-01

    In this review we summarise the current status of the quasi-static magnetohydrodynamic turbulence. The energy spectrum is steeper than Kolmogorov’s k -5/3 spectrum due to the decrease of the kinetic energy flux with wavenumber k as a result of Joule dissipation. The spectral index decreases with the increase of interaction parameter. The flow is quasi two-dimensional with strong {{\\mathbf{U}}\\bot} at small k and weak {{U}\\parallel} at large k, where {{\\mathbf{U}}\\bot} and {{U}\\parallel} are the perpendicular and parallel components of velocity relative to the external magnetic field. For small k, the energy flux of {{\\mathbf{U}}\\bot} is negative, but for large k, the energy flux of {{U}\\parallel} is positive. Pressure mediates the energy transfer from {{\\mathbf{U}}\\bot} to {{U}\\parallel} .

  17. State-independent contextuality sets for a qutrit

    Science.gov (United States)

    Xu, Zhen-Peng; Chen, Jing-Ling; Su, Hong-Yi

    2015-09-01

    We present a generalized set of complex rays for a qutrit in terms of parameter q =e i 2 π / k, a k-th root of unity. Remarkably, when k = 2 , 3, the set reduces to two well-known state-independent contextuality (SIC) sets: the Yu-Oh set and the Bengtsson-Blanchfield-Cabello set. Based on the Ramanathan-Horodecki criterion and the violation of a noncontextuality inequality, we have proven that the sets with k = 3 m and k = 4 are SIC sets, while the set with k = 5 is not. Our generalized set of rays will theoretically enrich the study of SIC proofs, and stimulate the novel application to quantum information processing.

  18. PRİMER SANTRAL SİNİR SİSTEMİ LENFOMASI: ÜÇ OLGU SUNUMU

    OpenAIRE

    Cihan, Yasemin Benderli

    2013-01-01

    Primer santral sinir sistemi lenfoması (PSSSL), santral sinir sisteminde ortaya çıkan eks- tra nodal bir non-Hodgkin lenfoma (NHL) türüdür. Son yıllarda görülme sıklığı giderek artmaktadır. Tüm beyin tümörlerinin yaklaşık %5’ini, lenfomaların %1’ini oluşturmakta- dır. Tipik olarak yaşlı hastalığı olup, erkeklerde insidansı fazladır. PSSSL’ında radyoterapi (RT) sık uygulanmakta olup, tüm beyin ışınlaması (30–40 Gy) ve primer tümöre yönelik (10–20 Gy) lokal boost uygulaması, klinik ve radyoloji...

  19. Design of tangential viewing phase contrast imaging for turbulence measurements in JT-60SA

    Energy Technology Data Exchange (ETDEWEB)

    Tanaka, K., E-mail: ktanaka@nifs.ac.jp [National Institute for Fusion Science, Toki, Gifu 509-5292 (Japan); Department of Advanced Energy Engineering, Kyushu University, Kasuga, Fukuoka 816-8580 (Japan); Coda, S. [EPFL–SPC, Lausanne (Switzerland); Yoshida, M.; Sasao, H.; Kawano, Y.; Imazawa, R.; Kubo, H.; Kamada, Y. [National Institutes for Quantum and Radiological Science and Technology, Naka, Ibaraki 311-0193 (Japan)

    2016-11-15

    A tangential viewing phase contrast imaging system is being designed for the JT-60SA tokamak to investigate microturbulence. In order to obtain localized information on the turbulence, a spatial-filtering technique is applied, based on magnetic shearing. The tangential viewing geometry enhances the radial localization. The probing laser beam is injected tangentially and traverses the entire plasma region including both low and high field sides. The spatial resolution for an Internal Transport Barrier discharge is estimated at 30%–70% of the minor radius at k = 5 cm{sup −1}, which is the typical expected wave number of ion scale turbulence such as ion temperature gradient/trapped electron mode.

  20. Biodegradation of pharmaceuticals from hospital wastewater in staged Moving Bed Biofilm Reactors (MBBR)

    DEFF Research Database (Denmark)

    Escola, Monica; Kumar Chhetri, Ravi; Ooi, Gordon

    2015-01-01

    Hospital wastewater may represent an important source of pharmaceuticals into wastewater treatment plants, which are usually inefficient for complete pharmaceuticals removal. Consequently, on-site treatment of hospital wastewater has been suggested. MBBRs (Moving Bed Biofilm Reactors) rely...... of pharmaceuticals from hospital wastewater. A pilot MBBR line consisting of three tanks in series containing AnoxKaldnes™ K5 carriers was installed to treat a fraction of the wastewater from the oncology department of Aarhus University Hospital. Two sampling campaigns were conducted to study the removal...... the wastewater treatment. In both experiments, the first tank was observed to conduct the main part of the pharmaceuticals removal, matching the general parameters data. Overall, the MBBR was shown to treat hospital wastewater efficiently. However, for removal of recalcitrant pharmaceuticals, a polishing...